baseMean	log2FoldChange	lfcSE	stat	pvalue	padj	contrast	normTag_BALBCJ_F1_Control	normTag_C57BL6J_F1_Control
Merged-chr2-68879298-4	28.9360162990704	0	1.34555789051881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167740982-4	20.6265187427731	0	1.34070455908372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86406489-4	17.8188773707739	0	1.33517498111865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136492398-4	19.4075632391588	-0.221426126844859	0.802030062301857	-0.276082078780635	0.782485025010192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.25298535761957
Merged-chr5-114654226-8	41.6090393840304	-0.4064072995377	0.293033250753572	-1.38689823933827	0.165472794814475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46171823457089	4.95889178747427
Merged-chr3-69529777-2	5.23761254198523	1.81282269040619	1.35819840984294	1.33472597027692	0.181966050474997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr10-98744342-4	40.5198086927827	0	1.33313011511312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113917781-4	18.2762601296236	0	1.35214470342659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66746661-8	106.218319792636	-0.202826024165892	0.21190678172212	-0.957147395272434	0.338492864262671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.46737107117568	6.2605356750577
Merged-chr5-139017892-4	27.5357438951178	0	1.34287614981084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73623288-4	12.1319395019067	0	1.34371789993326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113668973-4	63.0811912420771	0	1.34050941142058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21729550-2	8.94501712889728	0	1.41355300901945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122823593-4	26.5724716637405	0	1.3432813080476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105288772-8	93.0750477399046	0.214253258844984	0.228400290848664	0.938060359069096	0.34821339204877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.71988756831146	5.93838789955965
Merged-chr8-126832741-4	38.5364091390043	0	1.34368215979727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39241739-4	17.7235829738934	0	1.35913686579459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46477014-4	32.4871608932456	0	1.33716503251092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117891609-4	12.1305333907382	0	1.34777240557784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106819829-1	10.4962791487188	2.72085146214955	1.02139541703499	2.66385712797489	0.00772503645611995	0.168037317614336	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.70057842685494
Merged-chr18-23843549-4	18.5731775567311	0	1.3411847031971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21055628-4	20.7155554702211	0	1.3422544019663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62547093-4	15.8621819113708	0	1.34829344647815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60901713-6	59.4847581044029	0	1.33334112719863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193844635-4	18.48390925895	0	1.34090614947357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53361549-2	3.28729368635527	0	1.53140503951474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-6318-3	227.51277674085	0	1.50697851639773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119414395-3	12.2312825930012	-1.38536983846043	0.889496650161748	-1.55747617285406	0.119357473372476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30670691456252	1.18984215491549
Merged-chr17-29381643-8	117.993188261463	0.207457856087276	0.24204364653566	0.857109281968741	0.391384491892445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.90124390945823	7.08211125573324
Merged-chr18-39835846-4	15.9416951944825	0	1.33762770018672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57819467-2	3.93285256003312	0	1.43851031632885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135411184-4	23.6582307819132	0	1.33487711964133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113267455-4	9.98504657274703	0	1.35274734794052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180401974-4	40.0087669063147	0	1.33530302140101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81518511-4	11.1966290729849	0	1.3461590466728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98032390-4	17.1617821761483	0	1.33710793206266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96936941-4	12.7365381793045	0	1.35221030805045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36364826-2	6.69364562434012	0	1.40761208408154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28386210-4	90.9887571740671	0	1.34164699138967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38313583-2	4.70616555996122	0	1.46078013215058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36032697-2	6.64389912658423	0	1.38446890358289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110933010-4	15.7119209058047	0	1.34364650981787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38576187-2	6.89811792266351	0	1.3971738756437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123671209-4	12.1210034135587	-0.0346909668873196	1.26873457821439	-0.0273429663564018	0.978186187470039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr17-17448857-4	39.5257688933387	0	1.33920867946473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115494505-4	25.5158777405275	0	1.35119905770722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89287675-2	3.34527849849803	0	1.45634269247596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95530900-4	23.3519793923724	0	1.33653931432704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80452217-6	26.3915011991248	0	1.34140033500031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-14953661-4	33.1833599720443	0	1.33752901026414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115538829-4	29.3421448104172	0	1.33570770058469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63553982-4	41.2650754931963	0	1.33805604427009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120032107-2	6.52040963713955	0	1.4006986305861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95521394-4	18.0647702239137	0.222861682071358	0.642310262272291	0.346968895192401	0.728614686873495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	2.05565211658267
Merged-chr12-11196417-2	6.23799221344872	2.43447732571664	1.10908707384755	2.19502813000171	0.0281615799532817	0.406488402729803	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.79957942362569
Merged-chr14-105082317-1	1.27587917815571	0	1.66892998671416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120158028-2	3.52380326544935	0	1.61784715356698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55824216-4	19.2147551709781	0	1.34235490149445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61548734-4	36.1831967235564	0	1.35136033256474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114639566-4	11.557235836382	-2.7552146675703	1.12121616218011	-2.45734476589511	0.0139968287889219	0.254721665931371	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0
Merged-chr2-128715652-1	3.35173586164298	0	1.45033558713503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10898537-2	2.63540632329859	0	1.51274871745941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63971023-1	2.13118120482932	0	1.52479843376249	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62556663-4	37.5177372506578	0	1.33799512352351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8021116-1	2.63286110269537	0	1.49681025256062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3170984-1	7.23843825460157	0	1.37988522711523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14210242-4	14.9453204022172	0	1.34272551380683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96374779-4	29.65356610914	0	1.34075872165199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51455548-3	8.65247983644365	0	1.36480210036094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45299416-4	41.5105135157516	0	1.3444904101441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77033475-8	83.2622262974148	0.2973404388837	0.206478257517304	1.44005689731656	0.149851302343246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04784651238916	6.30845725489933
Merged-chrX-56482097-4	29.0286783644963	0	1.34112690996826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81523471-6	31.6186933934935	0	1.33897505341728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50409553-4	14.6222975456694	0	1.34022537545027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24419925-3	9.96737434544361	0	1.35490857421413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34118191-4	14.741353406997	0	1.34738905548875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89422133-4	34.8638483394687	0	1.34061827546432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26885508-4	14.8037941660731	0	1.34146780813522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131478442-4	28.0152271747938	0	1.3386482213121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51509237-4	14.6205682669623	0	1.34705125917103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152554354-4	28.0528325819707	0	1.34234653017443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21053793-3	9.9808512726895	0	1.40863519309348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149940437-4	26.8662498096393	0	1.33879473779734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72601095-1	2.61051250731933	0	1.42962395175869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6398378-2	3.97658255951818	0	1.57098246543706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5851382-1	1.72338020312871	0	1.63952966888954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180835420-4	28.4625941487017	0	1.33590040672946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52257875-8	168.533470749457	0.0116073656275548	0.192755282058799	0.0602181455344711	0.951981893893345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.23379059786582	7.22618164589738
Merged-chrX-109189765-4	17.3571397349179	0	1.33991814824034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95758581-1	1.86180690956624	0	1.58380807840929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61702532-4	75.7201191354011	0	1.33775889336342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17005128-4	67.0721526391959	0	1.33611305835138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39369570-4	24.5339299500736	0	1.3339009248849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125607999-8	74.8830467078282	-0.377871827196509	0.280222956237121	-1.34846849191313	0.177507747603751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.74248083206506	6.33972821786379
Merged-chr2-124927559-4	16.3767048380047	0	1.34067220114312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42943636-4	17.7286046000575	-0.601199475138929	0.571886832749805	-1.0512560190417	0.293141020835305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50979755465185	2.66320599947928
Merged-chr8-126842243-2	3.23957017445144	0	1.42187872543936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66447582-2	3.86584242019582	0	1.45024919801441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107402390-2	8.56222307473578	0	1.3749961572648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48410117-4	27.6245957559593	0	1.34456728068465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166776454-2	4.32336818884016	0	1.46766895938832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25379080-4	24.4508524725843	0	1.35731838908817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27232544-4	21.8903871170073	0	1.34253324476256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76328492-2	4.01654544319666	0	1.41982004020345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113580086-4	13.8342118727945	0	1.34661037008685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10754644-2	7.65259131235267	0	1.45539425793592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122985332-4	14.2328780951498	0	1.34089368695694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14074441-4	21.3651446146695	0	1.34063575737578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136135204-4	44.3867623960736	0	1.33847333113113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52653495-8	55.99158255195	-0.38632242151729	0.245327029897966	-1.57472424330073	0.115320109379931	0.992037636617138	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06683481961735	5.70500797014056
Merged-chr2-31446239-4	14.0607706131725	0	1.34969562202005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63474559-1	4.41409787999529	0.870074154503645	1.23627881901218	0.703784729725339	0.48156684477452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.55227291912954
Merged-chr12-86896622-2	3.51313512511909	0	1.53840854296148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129062948-1	3.46071184734634	0	1.43708048387009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90323422-4	28.2086250561194	0	1.33845012495041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83834407-4	38.9899138504315	0	1.34150977137606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25707753-4	58.4285071891433	0	1.33982337254615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124921726-4	21.7367837244575	0	1.33707505795594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32966931-4	31.3312671180235	0	1.33440484081916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116616966-4	24.4544972583939	0	1.34125632406727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132358993-4	37.5667321008401	0	1.34096857941467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46138290-6	36.8043432560616	0	1.33995722800858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30908125-4	23.1294964200912	0.934365363285484	0.774011820689194	1.2071719556602	0.227365928310163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.67273088548657
Merged-chr7-80715438-4	46.2215059766469	0	1.33947338387781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62828938-4	72.7435403098381	0	1.34165678457722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116377571-2	3.59637961827313	0	1.58038372074708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47261286-4	56.6734863567671	0	1.34167266020853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9009864-4	31.6252734295841	0	1.33836690251966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65973360-4	40.785969313426	0	1.33911361586691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58725976-4	28.6915325969066	0	1.36512583830874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84990075-4	22.6201009294037	0	1.3372514349678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94381204-4	28.4767680326933	0	1.34118017271186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-16953567-1	1.45416866031158	0	2.14946878693766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-28051-1	25.5516140852322	0	1.34441517128627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30606604-2	5.26661473963387	0	1.41987421265016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-133053033-4	35.9969633572531	0	1.33399533931311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191662370-1	1.68878767807184	0	1.78651578634522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82847171-4	17.3131118642125	0	1.34872879279879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25783949-2	4.62795191681171	0	1.46182046060716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75192977-4	19.6139841601954	0	1.36421002871685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128133828-4	24.0609448202947	0	1.33688953912323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121890798-4	25.0420832535486	0	1.33696886428007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52302376-4	15.1659944269119	0	1.35374097888311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84767697-4	37.8342611798185	0	1.33535364065722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-127045625-4	16.8026966817	0	1.33991948140847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122774359-4	13.9897887500355	0	1.34822494579514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21995794-1	2.72598953499073	0	1.5110629784389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101908791-1	2.67797120192451	0	1.42526455841812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35904558-4	17.2739050257435	0	1.34351412225996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87503059-4	78.279702332493	0	1.33731793786386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105669205-1	1.83279772231068	0	1.66625203768341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84748364-2	4.53245495241044	0	1.38870869203216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101879962-4	37.9186420732268	0	1.34841227561946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131658194-4	26.3575169981327	0	1.33828443970816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17851074-4	17.6747146040376	0	1.34504630711004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52956095-4	31.1087003286008	0	1.33333150266982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164866873-9	99.3885389766363	0.0341524757545603	0.20200557950724	0.169066992297291	0.865743947476277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.63986884316534	6.67223270155888
Merged-chr6-37144909-1	3.65135893486388	0	1.44045754651901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28257089-5	32.5346905585516	0	1.33537532016058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120436915-4	17.0093578721685	0	1.343184698455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25614915-4	11.1270607623094	0	1.36976963220031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10178308-1	2.41405036710048	0	1.42016850993285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138039308-2	4.97178489796854	0	1.40463362245668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76219243-2	4.44932852189543	0	1.423953595674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87859992-4	11.6106085153789	0	1.34689198781365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44579598-4	26.0746224866564	0	1.34036177051543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98683397-4	12.2968586626741	0	1.36350731685743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99785401-4	14.0311969696088	0	1.34274657566788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53530382-1	2.6560697888732	0	1.6057643158513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83129859-7	24.3146483200254	0	1.33889719815812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45121714-1	2.32980028444122	0	1.58764116679022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84981855-4	21.0340923680548	0	1.34844565048896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6244716-1	2.56419550636572	0	1.42076041796108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13159720-2	6.49654010324983	0	1.42068783034061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43998665-2	3.66101696979511	0	1.39805503208038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96686336-4	42.1241700560927	0	1.33748179210144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93234931-4	34.2536218992087	-0.131516676470197	0.62593171057418	-0.210113458462672	0.833579121603237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30243522796951	1.78982978868021
Merged-chr10-96338233-4	33.2366953970412	0	1.33592480527909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85345717-4	19.0786794424002	0	1.33996154884325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19895353-4	30.1865880111881	0	1.33513213899691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61099164-4	26.0753743191235	0	1.34468680426773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173430516-4	24.7999335469528	1.18043573799261	0.827379165706964	1.42671677861743	0.153661547344396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	1.6044622311735
Merged-chr10-34131530-4	31.5611361356524	0	1.33814272854758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-12606-1	192.709975120684	0	1.41625788582011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57347174-4	50.5064399460673	0	1.33569333352209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48694708-4	14.0759194203326	0	1.34215199027866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27926058-4	51.6213809825054	0	1.34000404538648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27715436-4	18.058924014762	0	1.34186488443588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31608935-4	11.5937322912861	0	1.34209797810671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49468049-4	48.9435881381253	0	1.33402159892425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89985480-6	41.6234017922645	0.607533455729908	0.500584213472494	1.21364885144004	0.224881843919844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98149480288825	3.39743259067044
Merged-chr13-42286065-1	1.68217754304015	0	1.7231971923133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58989030-4	40.7802468002838	0	1.3346905770236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124015959-4	25.2478114477383	0	1.34075458817676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99381791-4	43.0047788518266	0	1.33497880241968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24094568-2	2.57194216032229	0	1.51152528781131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66235741-4	29.1625300009867	0	1.33599793881591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130903952-4	18.7103827384261	0	1.33792283905829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95236469-4	42.8217174288913	0	1.33831312327754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100381258-4	18.8446667851076	0	1.34519674105173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112413787-1	2.63067570249347	0	1.4500813415882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14112375-4	17.8716213066423	0	1.35045273437002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5615151-3	10.019974170173	0	1.38245852630663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109440550-1	4.81835811956324	0	1.46403952966311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51911622-4	17.3764775361843	0	1.33965219119558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99122908-4	22.0252404935317	0	1.3465751707248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45916462-1	1.94856141900623	0	1.54526901563425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120324402-4	18.1314004214769	0	1.34445265600247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120883036-1	6.28987939658919	-1.3156005682761	0.959205827872585	-1.37155189225024	0.170202978713079	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8134253095212	1.25298535761957
Merged-chr14-47350990-8	73.9930988799811	0.0356735756352822	0.224216787348292	0.159103054045047	0.873587682091691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96783354049297	6.0098887184862
Merged-chr1-106818586-2	6.98785744136655	0	1.36853668624161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38567609-1	2.40792422396054	0	1.43850553996338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25011117-4	19.8940863938255	0	1.34435043548759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112594680-4	18.2978531947493	0	1.33831247772823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr10-66864619-4	89.2904679885674	0	1.3359766084652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr2-139919923-4	48.5633581014644	0	1.33952023056821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130801431-4	36.68379474556	0	1.33581543929056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr7-128089341-4	17.1880694514112	0	1.34010158199505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr1-144308476-4	15.8246399780221	0	1.3514975979213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94177917-4	48.4875639547342	0	1.33225138080813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63447976-6	37.8950676772884	0	1.33478503514266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100855967-4	25.350448895818	0	1.33601679029791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14669580-4	29.3145647368783	0	1.33474360547216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169095745-1	2.00312703177706	0	1.53268956541694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21787384-2	4.63283759690157	0	1.46045597944225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63052984-4	24.6849779823334	0	1.33834141729662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170853803-4	23.9822356305439	0	1.34556992061927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42258654-4	29.4316513765759	0	1.33829962630916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180405843-4	9.99034338690565	0	1.35523753019722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53855162-4	12.8479550866588	0	1.34706336760447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83637505-4	32.8958848539047	0	1.34162655823707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68363415-4	98.1527952694273	0	1.33997073092652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25321365-4	20.5665625102557	0	1.33832286050461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76615028-4	25.544268951893	0	1.35431581383537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99152947-1	1.85843236889904	0	1.61892769558365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-95748957-4	26.146856451214	0	1.34282864203773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37361120-2	6.32801194932963	0	1.38520225030901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33090727-2	5.05075072589067	0	1.48664036863452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59394009-4	22.2663462689312	0	1.33907973759978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-5874-3	195.053548745273	0	1.47744856923853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32133215-4	20.9867933447304	0	1.34741214538299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-43011330-2	2.50354508830896	0	1.69266461480198	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74647546-4	22.0935020460411	0	1.34296071685309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170998407-4	53.2412606002484	0	1.33632907735583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98522783-1	4.6154130358879	0.92846746532062	0.865272244705811	1.07303507191115	0.283255380527247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	3.07596080415233
Merged-chr11-83789426-4	19.5652234504627	0	1.33558732851509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87387696-2	3.77793840018696	0	1.43640895358811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84647876-4	25.215756688003	0	1.33622585235317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41433388-2	5.31658206676704	0	1.36281031420969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30992362-4	12.0264269615397	0	1.34409314246375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41332407-8	59.2423815679241	0.0163112163751335	0.223666769854048	0.0729264181075144	0.941864671301168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92654144670167	5.94182428115128
Merged-chr16-24136703-4	14.2610678132168	0	1.35115837116653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3137910-3	10.0782535362864	0	1.34838664632662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103012719-4	30.3992830212781	0	1.35732277988057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26780715-4	19.2698475830511	0	1.34635416668599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120698018-2	5.48571172791874	0	1.43097672963912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54398283-4	14.9099534833866	0	1.35497395620732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98786999-4	18.0220005443713	0	1.33977969068701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135182028-4	21.6482756142644	0	1.34012826165069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149445472-4	38.0235107510471	0	1.33824238561431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73632459-4	17.4091664170672	0	1.34315731300843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90215395-4	39.4261452569849	0	1.33418696617674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91825970-4	19.3279619500557	0	1.3393965571912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-88445654-4	18.7181870801991	0	1.33702573073395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54201994-1	2.32173757913922	0	1.50061605605811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20750067-4	24.7849796823896	0	1.34586907905467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64301477-7	75.4430878898802	0	1.33515714057185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100834982-4	54.376709567331	0	1.33526379089739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126228246-4	21.8236411940473	-0.0331888363095471	1.00385033752862	-0.0330615382281534	0.973625514018154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.08976818821237
Merged-chr18-10646655-4	19.6775771934429	0	1.33763594381435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20681318-4	18.3951475735206	0	1.34735521447678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137883112-4	18.4310315580285	0	1.33761486846563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104233190-4	19.860976936493	0	1.34239931036185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46851810-4	30.23294606557	0	1.33847073641223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12832886-4	14.9346687803679	0	1.34452768163029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66879667-4	14.4794615346612	0	1.35144483713467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45294416-5	20.7152219163951	0	1.33792769361577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64002089-1	3.87524465022266	0	1.38044652664306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57959426-4	32.1365014924621	0	1.33518065289974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113589723-4	90.8915669917762	0	1.33632263767884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59563006-4	22.8483756616657	0	1.3416677270984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61395615-2	3.41018506400388	0	1.54649398040922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117119587-2	13.3442708445579	0	1.35254843100445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91137591-4	46.8942775629155	0	1.33716814918848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19026835-1	2.10934964598088	0	1.87013800253187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-48080807-8	60.5344774322092	-0.174278313207018	0.227862734426336	-0.764839031910059	0.444367402234547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30572310747944	6.11717470106936
Merged-chr13-55190412-4	37.4739925858545	0	1.33780962004067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126858090-2	7.61864930495794	0	1.45709485599122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122654611-4	92.702626192907	0	1.33828162918927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9133891-4	13.6074835617382	0	1.36472808091514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36947670-4	12.7448752676242	0	1.346011026825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36449466-4	26.8432577520833	0	1.33528313896643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68864854-4	30.4172272531514	0	1.33653422275483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108201305-4	51.0874482412685	0	1.33855829703437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8912885-4	32.8909455991333	0	1.33599782319176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34781535-2	8.9664962821747	0	1.70579648590376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47793516-4	37.7445355538049	-0.0404562580941716	0.68318915096857	-0.0592167747933585	0.952779448735339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.97731223551783
Merged-chr3-108389374-4	20.5592258641925	0	1.34343194107109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26535924-1	12.0494712983636	1.49151217580733	1.18948130465008	1.25391813219469	0.209871763724872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.10056930386922
Merged-chr10-75505819-2	3.93374955696022	0	1.41796228807958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164084203-4	14.7134501307196	0	1.34172796685561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28335015-1	1.4917660262411	0	1.86070238436008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77826372-4	18.4913571284641	0	1.34209463544949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83066463-2	15.3216030503233	-0.613540691285441	0.52330606518524	-1.17243183693707	0.241023723667311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2549409351977	3.35150576105392
Merged-chr13-4771664-8	204.061614579945	-0.0742724748334636	0.18677923799852	-0.39764845188014	0.69088933993041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.39198080731427	7.31895037037318
Merged-chr7-83659566-4	52.971685070015	0	1.34262265561682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95106141-4	45.0020460210829	0	1.33503367923106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88969086-1	1.8248028434646	0	1.56591681382673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93069507-4	30.6247473303761	0	1.33505084553891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128781237-3	19.5214314282737	0	1.34508186041217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60707847-4	14.0070329101369	0	1.33813163809954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8412975-4	25.7395119872574	0	1.3362177384406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88118917-4	24.0959094461077	0	1.33695919040387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108571419-4	27.3089477137187	0	1.33431673084653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148574470-2	4.51203850814725	0	1.45766705962358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44405723-4	53.9591734056619	0	1.33839327191854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38289155-4	27.956600293432	0	1.33604314384151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141506509-8	92.7615111724241	0.140759948365908	0.178985912647398	0.786430318922391	0.431615426894643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.82410435871319	6.96800253317001
Merged-chr8-69115153-2	5.41075610900292	0	1.48837893326238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5036608-4	17.0363170468289	0	1.34559848260176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120083192-4	29.3298229410887	0	1.34132024726888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95651404-3	19.0643057884443	0	1.34123098934947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52905265-2	4.74099392312563	0	1.39481412417633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102393686-4	32.2937841104764	0	1.33727821993779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr6-108555086-4	16.6312921717373	0	1.3469830968121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25637924-4	56.0127967348968	0	1.3365910115751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36564008-4	20.1033877534591	-0.146202045769359	0.737069228953808	-0.198355921026411	0.84276660210479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57928534738074	1.82822317669445
Merged-chr2-128249435-1	2.32979432573454	0	1.45027107138281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-10458-1	26.3740953394743	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145272845-2	6.97795258295127	0	1.41598075481463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120805007-1	1.76945774085995	0	1.69302093595289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180296245-4	20.4060230286546	0	1.34539786352357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71628010-4	23.0009187769674	0	1.34669827167598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12858063-4	16.4757554626676	0	1.34911395868634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110430768-4	18.4955587143772	0	1.34273405837529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180778342-4	15.0965217439097	0	1.3406505820208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9975085-4	39.9394564895117	0	1.34858905722586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80836154-4	30.0856512642565	0	1.33319464059387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51931955-4	43.7354765104932	0	1.33774497176259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68796167-4	18.4605493530138	0	1.34102728852377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130847386-4	15.0219510302123	0	1.33911037388253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90916234-4	27.8868500916611	0	1.34267073520763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57707995-4	24.1853916845587	0	1.33375534805158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87334178-10	101.69384866449	-0.0672456899640315	0.262455764184292	-0.256217234066205	0.797783101828619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.49475412416183	6.448581681064
Merged-chr12-84175860-4	39.3383484643003	0	1.33733366424393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106881014-2	2.8773885325186	0	1.77715385447977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129081785-4	23.541090300553	0	1.33865468158087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66015733-4	22.914051356507	0	1.34244392774496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78331794-1	1.958546093618	0	1.48251244457888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-6144780-2	4.16501611964451	0	1.46376283145679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134567685-4	19.6477668176256	0	1.3394190689987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27351666-8	65.8978385982832	-0.319020333492521	0.232655383097185	-1.3712140645345	0.170308235090481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.09925113614541	5.75885347298134
Merged-chr1-135691195-4	13.7750333418025	0	1.34139909990973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-27018611-4	53.019832520221	0	1.33397370682938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45246290-4	37.2973759938646	0	1.34500878973388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35081203-4	27.8175131944949	0	1.33896044330896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36574764-4	16.0974603349691	0	1.34146535548749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76609046-1	4.44034919166075	0	1.45706925919422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122657854-4	51.3478806943706	0	1.33896575740526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97749058-4	13.9844294746327	0	1.34558034069429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139175465-8	64.0698172752461	0.00785300030195505	0.238656559873899	0.0329050259758391	0.973750324818615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.59610547230379	6.5649247604622
Merged-chr10-100033083-2	7.7754347178001	0	1.40414463110451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123897496-8	75.1310612664294	0.177089794600432	0.260927415177533	0.678693706753435	0.497331954494707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.11903518694313	6.2383041996286
Merged-chr7-31037146-4	26.6934564563729	0	1.34688252997189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63611343-4	15.5331070414193	1.13600009076024	0.678803642656261	1.67353269690024	0.0942224753534859	0.876908175774803	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81518459389541	2.63831142426501
Merged-chr2-167958990-4	20.8920303269681	0	1.34267188238641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95037537-2	10.686933884279	0	1.35174685860682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21894953-1	2.2767127414371	0	1.44503659829512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128843206-4	40.5474265455686	0	1.34110857874359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35157137-1	2.19628473372585	0	1.44791363382555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15738598-1	3.50623825621297	0	1.4634634349064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105561808-2	4.90115286599587	0	1.49537286278163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66231095-4	46.9875312035259	0	1.34279282811524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22818610-4	16.4123890256173	0	1.3438840517685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47273081-4	19.2251757996802	0	1.3476537788599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34958725-2	7.92887720553798	0	1.40878270683622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113591970-1	3.96472712839967	0	1.40502494416695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129528139-2	6.04716362280431	0	1.38400451511941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5165945-1	2.49661381773133	0	1.41863743159917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145222163-4	39.4830234681728	0	1.34577527100061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57290347-5	28.7808803032718	0	1.33422188459301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70107142-4	17.9304334984831	0	1.34511671347941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69012791-10	94.3874369304959	0.163416935138549	0.192477537955214	0.849018212070921	0.395871158391316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.61072614428017	6.75254447904327
Merged-chr7-132804159-4	32.921034892792	0	1.3335354258595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117194662-4	68.8735837149777	0	1.33418450554497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35724003-1	2.91799352033052	0	1.42110897628448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83632008-4	46.092666047306	0	1.34449286816137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126746925-4	32.8383509317964	0	1.3445206153031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-25791532-4	33.6342508216682	0	1.3334064029615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139430356-4	22.0426516952719	0	1.34282541451593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105411083-1	2.53548311836843	0	1.54858960497739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50306813-4	16.2344163805697	0	1.34033911235582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28037180-7	71.8327213624914	0	1.33107420109388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53120538-4	77.3437887497626	0	1.33811109793406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105716907-4	15.1480583692904	0	1.34971075505125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31177048-4	12.0602035393836	0	1.34338264813798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136292639-2	5.14674235435879	0	1.41350877385543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127632123-4	52.5614672474661	0	1.3392211401604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95869002-8	108.26222727673	0.828103001458606	0.187486672495335	4.41686329186525	1.00143521955056e-05	0.000886901570168839	C57BL6J_F1_Control-BALBCJ_F1_Control	6.33436906597981	7.18617079719164
Merged-chr13-5785671-4	32.9664654319173	0	1.34637688037874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6540209-2	8.41063698501906	0	1.43023107338339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107357321-4	9.23776561331081	0	1.35874862298306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80176026-3	8.54735867259222	0	1.35863472330476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122598188-4	25.4451208407329	0	1.34281769108257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105496295-8	50.1114524827884	-0.314453320241682	0.286751322289784	-1.09660634772558	0.27281351143029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65352411392495	5.36313196373751
Merged-chr18-67164552-1	3.05974680221389	0	1.47893855864847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97863472-2	4.0928127680564	0	1.46027555348682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86677568-4	13.7402640325644	0	1.35041532170292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70755108-4	9.98388403669017	0	1.34158734291397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32990788-4	13.4916851682716	0	1.34156357972561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64303050-4	44.7023831869144	0	1.33991822743559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123026359-4	10.7822971048807	0	1.34316662857336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8933261-1	1.91330654635863	0	1.56412588807317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31670008-4	17.8548996423808	0	1.34323485847687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50302669-2	2.53648448930259	0	1.53987612731203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39674384-1	5.7758338897938	-1.24307303010539	0.811448138747183	-1.53191925737189	0.125542360750439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59992349551192	2.58837482569552
Merged-chr16-31165616-2	6.34831301027175	-1.35365191397554	1.40635295615807	-0.96252644689815	0.335785224888048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr2-50669446-4	24.3219494092364	0	1.33967742978763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119377542-4	34.7134672535329	0	1.33556408798326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73034589-8	93.1119991998244	-0.323101800780869	0.225320998117389	-1.43396222935484	0.151583041744042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41811853894061	6.06939602949146
Merged-chr9-40521719-4	20.8057382571281	-0.74286515325069	0.70895409672571	-1.04783251367274	0.294715779609438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30923017122179	1.75132748634479
Merged-chr18-36700605-4	26.8386223269469	0	1.33854652594887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3742008-1	5.61243275691076	0.826415032470707	0.737264409490691	1.12092082817561	0.262321564270463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.205015762469	3.99800172276981
Merged-chr9-118901101-1	2.24882909792849	0	1.53906899616191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61090861-4	16.3022949582702	0	1.34300839141095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121395980-2	5.13877198656179	0	1.48999832103434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21682061-2	3.86554787095327	0	1.53255486284817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36482236-4	16.9936195637683	0	1.36503412322835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36656113-4	43.7061445163432	0	1.33954914588427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24597575-4	12.373088203798	0	1.34382155001262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23716438-4	24.6917440871464	0	1.35407387786671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75716239-1	2.58318589043921	0	1.39484165248734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43964727-4	27.2888236746029	0	1.337643851543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43209725-4	11.7509541002644	0	1.35102144308531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10134082-4	20.7880420367332	0	1.33726775332831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135404851-2	2.84309816820368	0	1.51425006803577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95668187-4	21.9524911730112	0	1.33989923762903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181536632-4	27.6508349793747	0	1.33847644823909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53839593-2	5.53360429426175	-0.715496296958806	0.974541427614426	-0.734187666819116	0.462834369099812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05123609864809	1.39949824061849
Merged-chr7-80203182-4	16.8598369252116	0	1.35045824033049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-71362028-4	13.2970701662397	0	1.34595427365656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89383941-4	52.6363236786737	0	1.33805824203926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50993833-4	42.8543849400179	0	1.33515658104968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118235134-4	26.6408507049989	0	1.34375929338561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83273946-4	18.5080325234281	0	1.33752632309882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-131910788-4	31.0199059205733	0	1.33556422805679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124730009-4	29.7813209127811	0	1.33394150759512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8521633-8	130.566150799578	0.0290939199406279	0.233385882396458	0.124660153570067	0.900792604098847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.19339579127298	6.2234017028732
Merged-chr10-111545414-1	2.35122280661792	0	1.59408979327362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14680350-2	4.54548156238324	0.80909375999503	1.18271439144086	0.684099023272505	0.493912638594561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.56608458088645
Merged-chr2-131204662-5	46.7943344997759	0	1.33700435796462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140766558-4	11.5194087155667	0	1.34027743967382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86977453-4	19.9161203970027	0.806005069890143	0.73438400520737	1.09752536026782	0.272411800930071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	2.48202477741927
Merged-chr10-6715873-4	20.1074047643377	0	1.35057473588143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135885915-4	20.3008950402573	0	1.34601449445149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104233279-4	23.7485751524044	0	1.33772010431224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46835915-2	10.9241874831984	2.49256606168685	1.02594579518053	2.4295299745814	0.0151184147386059	0.268571544384838	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	2.69040086528352
Merged-chr5-9087087-4	23.694081806653	0	1.33746529354375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43921300-4	30.9152589264065	0	1.33367552297226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100443918-4	44.3388754210291	0	1.33858196224775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-152336729-4	43.7428565960448	0	1.33931912280095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84752239-4	33.7605618795448	0	1.33269396974464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120582788-4	13.8553378853435	0	1.35068491524567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191072685-7	75.2212750909208	0.52371976369045	0.250796738629089	2.08822397991784	0.0367776351563089	0.4818327400012	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67538147086326	6.19883886958285
Merged-chr8-14879311-4	11.3032610216139	0	1.34318123104755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167773077-4	48.0557328911109	0	1.34032382522096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23882035-1	5.57879540884964	0	1.36946258044816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105599034-4	39.5704456401571	0	1.34104255306963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17550167-2	4.05485141175078	0	1.45380138793003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99360337-4	23.7852710350044	0	1.33646322854266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30593888-8	78.0448442844101	0.195695564924679	0.196308105862071	0.996879696155682	0.318822908121565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.60862188224994	6.81880488799673
Merged-chr5-124623123-4	16.655691470263	0	1.33873720968986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117195754-4	16.9150167820937	0	1.3476306735703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97412274-4	8.11790711002014	0	1.36511279467547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89569204-4	31.8720224508632	0	1.33910982172402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98896170-4	15.7223026745181	0	1.34384866938388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61920593-4	39.9341905014226	0	1.33710434626872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57952560-4	28.9769109481577	0	1.34060869998716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122577568-4	17.8669525978957	0	1.33607453283319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98949840-4	26.4750771696746	0	1.33433381060694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90145380-1	1.92831861011372	0	1.60475327396045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120938960-4	22.0066449808626	0	1.34886053388588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64916071-4	21.992061384562	0	1.33668075550933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124622163-4	48.3962938576723	0	1.33648085661078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104239740-4	36.0509083708195	0	1.33228743544492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114066894-4	26.1137452940949	0	1.33782279132913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53944404-4	16.890616746194	0	1.34290804448052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170002749-4	17.2132593627398	0	1.34370119355192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12041087-1	2.45600445048868	0	1.42906535714009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13361406-4	32.86867542146	0	1.3368762881774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117482016-4	29.1496738139953	0	1.34177437350818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66818163-4	30.1522973856028	0	1.34552871210556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125131555-5	32.4482934290706	0	1.34421385227004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61251864-4	15.2260505979099	0	1.34306789384782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105787207-4	27.1343108623311	0	1.33674639541783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149957688-4	24.871497488251	0	1.3363044280194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128704329-4	12.6261582852782	0	1.35714955848573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105742662-4	13.978614135065	0	1.34272692164452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13938867-1	1.84082187299174	0	1.5525304608917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54516484-1	2.25629824583919	0	1.40925118657411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80933848-4	33.8085221511957	0	1.35127759694148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17613484-4	12.8598602098322	0	1.35442426414916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74994309-4	14.1280362416604	0	1.33882842189583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46845221-4	25.9819902973069	0	1.34563701674307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4107814-8	196.210307323478	-0.826753573775009	0.248145768862386	-3.33172545139586	0.000863093583871402	0.0320689706942348	C57BL6J_F1_Control-BALBCJ_F1_Control	7.94689707707997	7.1313214745761
Merged-chr2-91395897-1	2.83715279106335	0	1.45405078957773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111160338-4	12.773613172192	0	1.35450700039603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32331236-4	25.2740118692581	0	1.34027595524071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167963899-1	2.36103975554037	0	1.50364911796109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149272660-4	12.1177014536029	0	1.34238818052479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89257215-4	29.4608360281285	0	1.34621865551181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53080384-4	18.7966457308601	0	1.35468638962025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27302535-4	13.7091491656058	0	1.34228586495292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96015948-4	28.3716502792738	0	1.33880982584535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148464052-2	2.64425764356417	0	1.48377311195675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80065327-2	10.2444221748745	0	1.36139720339405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96126506-2	2.92086625460592	0	1.49321469627429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37532629-2	4.59159351867604	0	1.44337279168069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25487089-4	20.1730296254574	0	1.337745896259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3377146-4	32.8532941199006	0	1.33935620207547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101863234-1	2.29424326450924	0	1.51885895066196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72379181-4	37.6249732865886	0	1.34346074564395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51865192-4	31.3612639728997	0	1.3349425866103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86169926-4	45.4937540021629	0	1.33374801092536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180403830-4	107.331430931491	0	1.3397651767873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145274063-2	6.93736292917868	0	1.50027570936451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167713279-5	28.0456791261463	0	1.33803792517836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144047085-4	22.0729722140535	0	1.33977173317561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-118197301-1	5.9092762349046	-1.71256284071245	0.910796844333652	-1.88029070518506	0.0600684693715014	0.667469731513787	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31832503957823	1.79211889231401
Merged-chr13-42156137-2	2.71909088066267	0	2.00176224638355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120790873-2	10.9730603789862	0	1.37273335926821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90232966-4	29.0558970549682	0	1.34021986622511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3929727-1	1.872807634035	0	1.57384804873927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75769456-4	14.3388035490479	0	1.34343808489882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60910934-4	38.1086012381149	0	1.33967669002493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54998478-4	9.26290523516849	0	1.34879830510325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23975235-8	77.5033443150768	-0.257813296736991	0.203748555909864	-1.26535030192334	0.205745782149852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.37667545647467	6.13256057534182
Merged-chr2-12406893-4	19.1552148207545	0	1.33785234765304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33824252-4	37.8881302874674	0	1.33311158632409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53250518-4	35.0952884325641	0	1.35187825508658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60760606-4	12.0866078028429	0	1.34743560314346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111456095-4	21.8142666255383	0	1.36743091388143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58806122-4	10.6117863206587	0	1.34416411150085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96494162-3	11.6688723213837	0	1.37609305622884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99906329-4	30.7833172004036	0	1.33737527707211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40559299-4	39.8333741206905	0	1.33588959888124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97942746-4	14.7588130751424	0	1.34053726858693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86895048-1	5.07289300940061	0	1.36335781567193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136852645-2	5.1186431447815	0	1.4906457910528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149325983-4	17.8119641391801	0	1.35490142355611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76217306-4	15.2549935465403	0	1.35655653112316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142493668-4	15.9944976571366	0	1.34394101806962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44962397-4	13.9590834287461	0	1.34327060732649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19871430-4	34.739123144302	0	1.33207271044883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140207828-1	2.85948813413434	0	1.41511496913287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110672809-2	6.90493538101918	2.65401147059902	1.20685975828953	2.1991051175329	0.0278704487407368	0.403787239631587	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr2-165933994-1	8.28309406631264	-2.20872593465703	0.67014985044873	-3.29586872723777	0.000981178509879135	0.0353451839751623	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13456686459376	1.83763882844377
Merged-chr1-180771948-4	14.0547121769424	0	1.3566444090539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107497009-4	30.4309427614506	0	1.33424488339906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95009970-2	3.16829382713722	0	1.48600008561556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88509221-4	22.4855283843557	0	1.33994849440287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62460526-4	26.3303953895801	0	1.33668333320031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21737808-6	28.6296435042125	0	1.33500695704227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152540710-4	40.3630524488029	0	1.33636412306785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148452942-4	19.948075888529	0	1.3356377473664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47070239-4	21.874518012187	0	1.34169077862212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106695945-4	23.9835601017345	0	1.35154328695688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32276986-4	30.9324255052751	0	1.33542015393745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113594566-4	34.6146972388472	0	1.35304532230763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99168232-4	32.6040222488547	0	1.34450415187102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25167632-4	14.599044090877	0	1.34210596074418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78362565-4	31.4337516467448	0	1.33776551453792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-9460-1	9.02208859920651	0	1.39814835385077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26722852-2	10.2885958833323	0	1.39235831527499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91841138-4	36.9442343908869	0	1.33563131122367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125454668-4	24.1445634385488	0	1.33733041589787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80785927-2	5.02371144347637	-0.0195189448854702	1.32370562932959	-0.0147456839745827	0.98823507277129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.601513806634888
Merged-chr12-8519696-8	94.3473919063298	-0.0665886311481018	0.200733304302613	-0.331726872027758	0.740095507644962	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24896736677098	6.22824028481162
Merged-chr8-70003296-8	70.7623813131131	-0.118324047113483	0.224776299035566	-0.526408022648157	0.598604742729093	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.35270756536393	6.23128001429652
Merged-chr12-104231016-8	111.233326359427	0.0416271322700743	0.167950608434845	0.247853417489839	0.804247822895938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.18804985191931	7.22228033781353
Merged-chr2-6731026-4	11.4256236854153	0	1.34623041033825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38373909-2	8.06825158846639	0	1.40985759657882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34171904-4	30.7358090542786	0	1.3398231497201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39968264-2	5.17415850266597	0	1.39342045965326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93863543-3	13.8636825183107	0	1.35051241126144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84350463-4	11.4050685468134	0	1.35637421137423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67636725-4	12.7437006366485	0	1.34344328681643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5211862-4	16.7911459272694	0	1.33987838571026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106230172-4	23.3498009926075	0	1.33594697505556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105925842-5	36.6429582955284	0	1.34459179335706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20544656-4	26.6029222447612	0	1.33466618151611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56740332-4	22.9926645231846	0	1.33945615643305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32563814-4	26.5619766953476	0	1.33455499509548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31057479-4	21.574972479672	0	1.33639094488493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113870578-4	28.4077282329645	0	1.33459151452803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44063358-4	17.3763166187163	0	1.34362869164813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106270050-4	14.9354873030833	0.0867002482555948	0.728614345096752	0.118993331436649	0.905280638987278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85212475157961	2.45851098297781
Merged-chr4-151108606-4	12.442207564712	0	1.34280120291775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167751768-4	11.2664897399332	0	1.34184268694734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167229496-4	48.1136579280566	0	1.3362767158415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66436990-4	13.6295089687759	0	1.35038291274118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75180721-5	29.7009539063939	0	1.34348538488568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32174305-4	16.797921888077	0	1.34785899371972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138136610-4	31.7056769419221	0	1.33656696494259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36714371-4	21.6488811883008	0	1.34143594591447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12320891-4	32.6587092844895	0	1.34374922780826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25828645-4	66.0062882384215	0	1.33472473204178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121675147-4	29.6599603168753	4.07088710173942	0.651002056717767	6.25326304230755	4.01964263830042e-10	1.22069136410823e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62581156516825	5.57189766500173
Merged-chr10-37190229-4	26.5747854609714	0	1.33344106827218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38198362-4	11.081141879638	0	1.36557511687433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111437559-6	63.5803707707455	0	1.33597760391482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118811325-4	70.7630632845716	0	1.33743360665676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78247237-4	17.4007052136206	0	1.3450380165205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107489825-4	13.7431961539641	0	1.35509338971914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56793212-4	48.1094187541564	0	1.334480338985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118052374-16	249.202326914449	-0.194508368289069	0.104670239815445	-1.85829676737177	0.063126882646101	0.688229886433895	C57BL6J_F1_Control-BALBCJ_F1_Control	8.79761495871882	8.60217100038425
Merged-chr1-87828486-4	30.968974962576	0	1.33881855755906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148534592-4	49.6129781811688	0	1.33816345616748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84531464-4	19.3774139673728	0	1.34081759561926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53589920-4	20.2230657635525	0	1.34172561515745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25385890-4	12.6733082927076	0	1.34735755437205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33876573-4	23.3785386418841	0	1.34015627752687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98046594-4	31.6229676951478	0	1.33925196810681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29043705-15	107.618481879018	0.246171302005148	0.16125009547078	1.52664282949065	0.126849850760585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.73719115166082	6.96032526655807
Merged-chr5-21386580-4	26.0394061743156	0	1.33798289382501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65670520-1	1.42301789168163	0	2.44484962645154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86273526-4	22.0874368084617	0	1.33840502063005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52563787-4	46.1948125121894	0	1.33860360618667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31187275-2	5.32339678044327	0	1.44696822284759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-65037-1	5.50390569098502	0	1.43316745877644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60821833-4	36.9988580387433	0	1.33338689353469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26698744-8	237.01003211503	-0.168267837805672	0.149451387004226	-1.12590348727185	0.260206373126146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.46397307860126	8.28718218782815
Merged-chr7-46830926-4	27.0007263445763	0	1.33461384799655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85945134-1	2.27764181132995	0	1.60247446720599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86652782-4	21.38732148867	0	1.35178153648521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29478478-4	19.3212149681578	0	1.33826012301625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56353457-8	156.979198970132	-0.358894089652852	0.143482378142987	-2.50131127109699	0.0123734372215914	0.233625451173492	C57BL6J_F1_Control-BALBCJ_F1_Control	7.83204218902093	7.47145250765051
Merged-chr14-55697449-4	17.7649512684309	0	1.33781250429062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66476530-4	25.5665109912681	-0.0372244081152425	0.536897095621548	-0.0693324818085466	0.944724971192669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28321719566487	3.24878924596202
Merged-chr11-97533271-4	19.1441043305136	0	1.34710828750404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111933707-4	16.5808489544854	0	1.33726086109795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94497963-1	6.3582306950372	0	1.3716012869738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32186985-3	12.0578868434877	0	1.37000078417208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38965649-4	12.0104577638512	0	1.34780417032242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61452018-4	38.5004427338228	0	1.34022781860653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84698863-1	1.49793363801837	0	1.8587004730319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132515641-4	49.0540370810587	0	1.3379476190645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-137921779-4	20.5188885366754	0	1.34099660431322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87987029-4	19.4734436814768	0	1.34460254045238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43885218-4	18.193357926966	-0.0346002502096475	0.902502911930197	-0.0383381036806268	0.969418110761643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.730937814817307
Merged-chr13-98872612-4	17.6760382917174	0	1.34422961693676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59397698-4	10.7725826204817	0	1.34364551960293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17807616-4	19.0132619741053	0	1.33771603569133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73029940-4	37.7128716832387	0	1.34507127827482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-144267797-1	3.65037669274026	-1.59009190897246	1.1272846405094	-1.41055049614969	0.158377197127782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96617270997603	0.577068348605183
Merged-chr1-134094022-4	52.1920135864915	0	1.33913715765646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-119007572-8	171.050975361383	-0.0122390015867908	0.210197897689278	-0.0582260894201849	0.953568539619329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.04516368723579	7.03646064431118
Merged-chr7-43538728-4	13.3861334274324	0	1.33862323288853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116682463-4	30.1789397000394	0	1.33500791087418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96393328-4	26.8840536287789	0	1.33710677039131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67815657-4	39.9745162589138	0	1.33347572919454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131103981-12	94.8595721740521	0.239933982445717	0.214984494888448	1.11605249750786	0.26439966379807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.35413054578403	6.60133554609159
Merged-chr8-88662484-8	197.931952878456	0.0166742321830684	0.17680810637332	0.0943069439806213	0.92486533400304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.97154531013355	7.97432428867983
Merged-chr14-30613525-8	71.903448685044	-0.801005530181331	0.29200094065508	-2.74316078703151	0.00608508818785259	0.141710872168079	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78109499336258	4.68024037083137
Merged-chr10-56879889-1	2.2986193182542	0	1.48574765661491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167496578-4	45.7255259841804	0	1.34616008919276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133458913-4	36.0421685390096	0	1.33907722072824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93083800-4	25.7304732445302	0.114134928592359	0.530953522650342	0.214962183549768	0.829796802461378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21494452119183	2.74800853506351
Merged-chr3-96251954-4	8.49656404175917	0	1.36860657342704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52047197-4	73.3275327760121	0	1.33426815002579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3647238-4	23.8380641116805	0	1.33578609519014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132010944-5	26.2021608406238	0	1.35183152260143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94961476-4	11.9942694074065	0	1.35646775214166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99181714-4	49.9326022263555	0	1.34015739640451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-7128-1	8.74177634127865	0	1.37547028134651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60936156-4	9.31786279052229	0	1.34736793063653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-15244804-1	3.40448294323535	0.449986566947516	1.32236069545776	0.340290337192566	0.73363789323749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.67591700901439
Merged-chr12-111599717-3	7.70933514678385	0	1.41280376259038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105495345-8	95.4889350595517	-0.889846842437651	0.213795810594417	-4.16213414081224	3.15287039623729e-05	0.0022610406579032	C57BL6J_F1_Control-BALBCJ_F1_Control	6.6336606145073	5.76401858141368
Merged-chr6-22124748-4	15.7177945265247	0	1.34587808918314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142746956-4	22.7985957145621	0	1.33868656541573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-17608915-4	18.539940648066	0	1.33446169665529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76552539-4	42.1034275046501	0	1.33340986455236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151210214-1	6.57892173633866	0	1.3663094447106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40733756-2	5.86697592713148	-2.25235649415655	1.14514644784493	-1.96687200872456	0.0491979682869089	0.583410200285358	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	0.465515277017237
Merged-chr17-33799460-4	18.9952599027608	-0.0350428002809157	1.08849985793487	-0.0321936654611969	0.974317607792068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr1-39594376-2	5.09576151210517	0	1.41720834374351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118617464-4	61.2213919222856	0	1.33406033030433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21136108-4	20.4277418777765	0	1.3783435362104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23869178-4	33.0245202912645	0	1.34582448005359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-57673729-4	17.0792014190005	0	1.347940349124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131514926-1	1.35434444920364	0	1.59570565762735	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-14996658-1	1.85135993057451	0	1.50808311280144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153566314-4	17.0740293377901	0	1.34114595720936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154065553-2	8.2397084028758	0	1.38281501264559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44729172-4	15.3595489645863	0	1.34534514964082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106639178-4	21.4990107736579	0	1.34261451197224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99375882-4	62.5308244941456	0	1.34067421765723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16254380-8	96.5905376977986	-0.00587410085951503	0.243907098640459	-0.0240833534253711	0.980786121514414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92841073130971	5.92178528240533
Merged-chr6-31080835-4	23.5103799959607	0	1.34146339284611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75794391-8	73.894355438199	-0.312516031850721	0.288748907141675	-1.08231070013153	0.279114493013791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.93392822003256	5.68057658201132
Merged-chr3-116185420-4	13.8343542150098	0	1.34109152651764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-96551192-1	4.3170897300598	-1.55997437485284	1.13330129574221	-1.37648688897968	0.168670943715159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18352870898958	2.40379026893799
Merged-chr17-86162098-4	12.1306401371639	0	1.35355261166265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-24349691-4	12.5154980056953	0	1.36096474165348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36627044-4	49.9882016867042	0	1.33860160814882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106660821-2	10.9262403380579	0	1.34796993173995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106958396-4	15.6807141463399	0	1.34722119945107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60298426-4	16.4616479796785	0	1.34016684122488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108503846-4	56.654035441086	0	1.33518392839925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115570526-4	12.1492444200614	0	1.36221798722297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27311800-4	21.8075753400136	0	1.34197748859454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72141370-4	27.3062256781421	0	1.35523117443165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23868501-4	28.778947434717	0	1.33923904277709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77961576-4	42.115345441839	0	1.33356223389437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166699535-7	42.0516818938822	0	1.33944655983322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23314965-4	48.2318803661716	0	1.33513245779689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155076103-4	28.7461504266468	0	1.33974845040908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115332219-1	2.5974487578856	0	1.58527606691126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56753665-4	15.0567380181483	0	1.34700823652763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52060262-1	5.95770819305463	0	1.36940285845993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11438434-4	10.9209932733029	0	1.35550530804931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128372387-4	14.8296432153267	1.74483866331118	1.22880248036032	1.41995047308135	0.155622100245772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr9-62373106-2	4.85136690882731	0	1.43719782251681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20204511-4	26.0737062223357	-0.799200726324759	0.61032035024671	-1.30947743427152	0.19037267670546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53628445873148	1.6044622311735
Merged-chr18-67699750-4	22.2797954360105	-0.225535327385496	0.521940749307613	-0.43210906158349	0.665662149028582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25185101899695	3.0449933125683
Merged-chr10-17870163-1	3.232877961555	0	1.49740465381599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155217563-4	16.2516542378126	0	1.34060197189956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178217334-1	3.3884817935005	0	1.56999503631795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6478488-4	42.9839789190024	0	1.33589401797355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107949837-4	17.9884115954197	0	1.34203000769976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134452521-4	32.7586800145429	0	1.33562390401419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7868203-4	23.8628293088959	0	1.34639438932124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108132697-4	10.9882662436405	0	1.3440893418537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118053246-8	110.098343197642	0.0333059612516428	0.157650416417901	0.211264657641976	0.832680759609927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.50495238761296	7.55757554969027
Merged-chr19-60161144-4	18.376785719598	-0.0382985249320226	1.09157447935555	-0.0350855811090725	0.972011498942195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	0.67591700901439
Merged-chr8-84737799-4	25.1734644455958	0	1.33645604478176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80619989-4	12.5538223999174	0	1.34639669448007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136553944-4	20.267137318695	-2.74447298194716	1.11940192935037	-2.45173150946764	0.014217069878475	0.257351215958716	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	0
Merged-chr4-103359242-1	3.69322774334609	0	1.39652915206671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33203997-4	16.9672604863407	0	1.33894808162894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28327425-1	2.85762403962107	0	1.56366631344537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76053709-4	19.1837272210217	0	1.34987641901404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129429578-4	20.0945970750642	0	1.33606438072928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78809015-4	20.2305226232433	0	1.34638998152004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9955078-4	15.7208245597109	0	1.3652173026759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106231503-4	37.4868586040786	0	1.33689799059803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-42880625-4	18.4431657681223	0	1.35177264405272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120032538-4	54.5845490382805	0	1.34570533445464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69544254-1	6.4104782177671	1.11828505676223	0.925195322186081	1.20870158975719	0.226777510708826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84686254141174	3.47536494603312
Merged-chr4-36014305-4	37.0301822888383	0	1.33536886809819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9783923-4	19.0828400849748	0	1.33676252616131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38554200-4	35.0113855583025	0.628909309293873	0.638208877287459	0.98542864519041	0.324413564884886	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24736579827037	3.44709393941609
Merged-chrX-21695920-1	3.58562664871646	0	1.52000925256777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29649394-4	13.6459768129637	0	1.34680861806302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71125642-4	12.6286103296595	0	1.33962919650488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180764092-5	19.6803511361166	0	1.3454302003374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76522656-4	16.4111628383298	0	1.33814373272099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117417519-4	30.7479341065681	0	1.33640232578637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191216280-2	4.15672273958351	0	1.41633607875506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55814993-4	14.1261238592044	0	1.35019891643045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127786040-4	12.787005437689	0	1.35162862164964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132593079-4	33.3887471273504	1.25789469162349	1.30721388400864	0.962271520377435	0.335913231010557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr5-64887241-4	25.2280712891588	0	1.35026514952178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76223633-2	10.541023357018	0.877644836521416	1.13038825069591	0.776410083863754	0.437506892564597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.39949824061849
Merged-chr15-58746710-2	5.56292347314769	0	1.3739391901267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44664096-2	4.95385838764227	0	1.42519476756031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-26697297-4	32.7347784867001	0	1.33797953961893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63124342-4	23.2025997506125	0	1.33897228133804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145729720-4	12.2470369207113	0	1.35092602794567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15758690-4	65.6379812470109	0	1.33546974675719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-74305931-4	12.0724701468905	0	1.34457657652188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124834729-4	47.9619242104566	0	1.33264724355879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3782730-4	26.140939749969	0	1.34625207269066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111810015-4	18.5822856302825	0	1.34000955767499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97211284-4	30.2587440129961	0	1.33754238082346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76964208-8	110.137735346552	-0.273404550789025	0.172949605719127	-1.58083361712335	0.113916085840811	0.986045304175261	C57BL6J_F1_Control-BALBCJ_F1_Control	7.0307590136709	6.75937465752682
Merged-chr7-19501165-4	28.7217604448507	-0.60556863999623	0.611369795320538	-0.990511216993856	0.321924309251805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94640134381309	2.06239089973625
Merged-chr2-128297052-4	22.0811992801388	0	1.34108533600311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106375617-1	3.80538373914755	0	1.42226286602503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27664321-4	46.0766891612331	0	1.33897366504932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134799502-2	13.487319248035	0.695940991360487	0.810910493172844	0.858221711544862	0.390770049430163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	1.33638302378291
Merged-chr10-94967404-4	18.4016174428552	0	1.34704967251594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59904166-1	3.9383910803052	-0.372722428095214	0.810748561263614	-0.459726289879932	0.645712696676112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43491183200938	2.38418592814324
Merged-chr2-136937057-4	38.5375631526354	0	1.33685226067032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149171696-4	18.2381215100619	0	1.33731416317903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153147417-4	19.8251578872882	0	1.33993915451573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113762549-2	4.12625385529994	0	1.40503471728397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65684036-10	157.640960618756	-0.26351810948633	0.17831236843328	-1.4778453777587	0.139449169343609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.228327430816	6.97033676428617
Merged-chr12-69500762-4	13.1302008426631	0	1.34228695098645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7847218-4	18.584385793249	0	1.33872203161338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25680853-4	18.9287445901119	0	1.35110878774418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63231005-1	3.6274392413457	0	1.51287366098083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109023482-4	18.2287513944012	0	1.33950085857582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24516581-1	4.86858954809398	-1.41868493210855	1.02253503790252	-1.38741938370995	0.165313917708983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30491330480933	1.48018155595824
Merged-chr11-113730159-2	3.08140021382923	0	1.5125798740034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99212723-2	4.42607046078572	0	1.48781861124765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154032856-4	49.0174651075446	0	1.34091073903373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64308760-5	28.7494178643246	0	1.33901274301914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98684317-4	28.4181732581166	0	1.33883791650611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89563608-4	13.770399163639	0	1.34149190210141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82283357-4	30.1076338439264	0	1.33424397871537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124477578-4	14.6136243313424	0	1.34669396659609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25090594-4	21.7068876448303	0	1.33530249086652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100859308-4	37.0994510977171	0	1.34262582928762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89835642-4	10.7435011912915	0	1.3469641244176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4232863-2	15.7485678427391	0	1.38016265687626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102924847-4	23.9046579005204	0	1.34397991674504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47683014-3	11.2960062369068	-0.718511692817658	0.999726584937714	-0.718708198464506	0.472320730797354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	0.97908007631626
Merged-chr1-59316192-4	14.842508622837	0	1.3497312199135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113486636-4	53.0157109554765	0	1.33578368683295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37234891-1	3.66688839713279	0	1.46267863929957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84222807-4	13.67816198052	0	1.35292278471316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132224501-4	32.1208032103189	0	1.33514446552161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12314213-4	30.5602763834866	0	1.34289976316847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102219001-4	24.8851594585061	0	1.34205134574524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88551176-4	23.310311347317	0	1.34048010069322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96706144-1	3.21702406605102	0	1.4374587072441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122748013-1	2.29286159888207	0	1.59448420198183	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85533070-7	111.024808968031	0	1.33463201573622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139286754-4	17.7954216042451	0	1.34391417707329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180762845-4	23.5295642576049	0	1.34011323035829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158175652-4	71.05613080782	0	1.33913645615297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41937378-4	10.5743933141754	0	1.34468128843826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5347918-4	20.8061817148125	0	1.34134788342549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4567146-4	17.5981588244517	0	1.33863127516083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114894347-1	4.79764233481466	0	1.38708601194699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120262902-4	27.2567018837151	0	1.3407257980056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57594411-4	33.2132544745521	0	1.33365874939476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127275428-2	3.70766971873486	0	1.5049898833139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46873976-4	29.1681248052853	0	1.34093909489267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52113751-4	48.5937604994521	0	1.34132155692086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136458703-8	59.0690106606964	0.984719546277134	0.297558959771007	3.30932581238671	0.000935209380979867	0.0340506923048981	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91758734820948	6.0864561536363
Merged-chr6-125481912-4	23.8904097853461	0	1.35057336796429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120002117-4	64.094535690911	0	1.3477492565108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-105778594-4	13.1902694509049	0	1.34912768271724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50813926-4	11.8274491681884	0	1.35203681415514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52383095-4	22.2811393227325	0	1.33679313845299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97319795-4	15.5140749400066	0	1.35169059889679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180417341-4	37.5340805355531	0	1.33239623703461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58039682-2	3.8964046064703	0	1.65900734828585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55556437-4	24.1350100634513	0	1.33593643100064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170322270-3	25.8606680642971	0	1.33725477131327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4678566-4	61.4240751147263	0	1.34103184037385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78136167-4	32.3846998450813	0	1.3586744885126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119338083-8	69.7835736883614	-0.403535786049247	0.237580675922154	-1.69852107913638	0.08940945769236	0.847612262068189	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20968728234396	5.80988565964491
Merged-chr2-142758230-4	28.46674560366	0	1.35556947151342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113466646-2	3.46375448871579	0	1.4366486745941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43921586-3	5.83223687311737	0	1.37432622640424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21991880-4	18.1738433107386	0	1.3398887268492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73542187-4	27.7806083744881	0	1.34632177942731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-140175679-4	14.8087939475104	0	1.34718283532683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87956729-4	12.421457068764	0	1.34333260688579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75304663-4	30.0272703182162	0	1.33558013452625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45279660-4	39.4600453583548	0	1.34535619557625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5367110-8	97.9281663005016	1.57404807154086	0.255651370252819	6.15701011101272	7.41311178963795e-10	2.15491627686059e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.72716756427896	7.37120894480197
Merged-chr3-103213715-4	19.7540485624674	0	1.34223308523611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103678323-4	14.333013257394	0	1.34485794830564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36130492-4	21.0317869003499	0	1.33802193771716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46432079-2	5.93032989277397	0	1.42023877239436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115859741-4	19.367878032887	0	1.34705420631937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71458165-3	17.1893414720919	0	1.34258736641327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165682653-4	19.3367735782993	0	1.34492679337938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59828570-4	37.564257191852	0	1.33534229982679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123713982-4	25.1083665170848	-1.31151921970128	1.3037754136608	-1.0059395245219	0.314444661940553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr8-104565067-4	18.3046981690194	0	1.33828660003758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75179455-4	18.5480012213067	0	1.3432808899975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-98322422-4	13.9056282866655	0	1.3403336058993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25862131-4	12.2812427756201	0	1.35342236232794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98667885-2	3.26538686222687	0	1.42761125210008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116975962-4	24.2998840859316	0	1.34991522991455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56472997-4	22.0886665457736	0	1.3409405140315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42225327-4	19.4011566979189	0	1.34117312574528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8746881-4	18.8627701267117	0	1.33808308063919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41739299-2	7.21802915984651	0	1.35421868166162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73671711-4	12.4229524062925	0	1.33966995944635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_GL456389-10666-1	13.9617432130539	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116724673-4	16.6855181674904	0	1.33793638116387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11465415-4	23.6956384630679	0	1.34007027691252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120517786-8	69.0622204473449	0.311282372144578	0.236317965866268	1.31721839684729	0.187765429048845	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68374871479026	5.99427516335735
Merged-chr8-116581491-4	32.5282041760526	0	1.33760885232287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22096212-4	35.1141487290882	0	1.33851703433589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22847850-2	4.53624169524211	0	1.47980970925593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123928605-1	4.15997960393281	0	1.36648769305126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41345662-4	17.7930036444991	0	1.3415453552743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98997216-4	20.7248085021197	0	1.33692017485236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126135071-4	34.2163665221683	0	1.33457860323491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119812086-4	28.1732932632382	0	1.33812137476867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25776932-4	43.8701804702866	0	1.33770222470588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8647352-12	140.506953851984	-0.326410775487885	0.251979541181894	-1.2953860220432	0.195187097543657	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.93029190213592	5.60935009298869
Merged-chr14-26643430-4	16.9633707920456	0	1.34244974585575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99378205-2	7.95005366757397	0	1.36144744380648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30211867-1	8.57922359498664	1.63211377129298	0.759152601093678	2.14991527255741	0.0315619173403932	0.437672006302662	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	3.23909369368793
Merged-chr1-37478083-4	12.4117920019531	0	1.33987104481372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102713538-1	3.79572145555236	0	1.55874984488546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36709640-4	42.9945231830776	0	1.33868626656597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11065446-4	13.3184666531318	0	1.34400193716557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96914783-5	39.1392132041231	-2.02079334794303	0.366971170773344	-5.50668147496294	3.65660999123495e-08	7.12436066356776e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05528016827462	3.96171122991199
Merged-chr10-68125195-8	81.4383590681415	-0.33267251405075	0.218148785982531	-1.52497990099926	0.127264110893851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.77336547427845	6.43330020087319
Merged-chr7-104397480-1	7.73209749392282	-0.655076516352838	0.71644562532205	-0.91434226576284	0.360537028328419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10471612392702	3.37786061389897
Merged-chr7-128048976-4	17.6352562292586	0	1.34482465141385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77211428-2	4.71678673058033	0	2.13243993096812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184049249-4	14.9528306026483	0	1.33996500810203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7250788-4	18.2147661122616	0	1.34222864126868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76110482-6	40.4402334483091	0	1.3350375452578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61275080-1	2.27138955309132	0	1.43347352054685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34327014-1	2.84386032821112	0	1.41366992176421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22286555-2	7.80680275945602	0	1.42629928871579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27542850-4	18.0152307610971	0	1.33842037622007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167266618-2	7.56283546114312	0	1.35610794477864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180365297-4	34.0259615340088	0	1.33756729299479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117055315-4	39.5731067206928	0	1.33525701891086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110094498-4	50.9208214996665	0	1.33672624338585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48908918-4	19.755838134912	0	1.34470448827664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8777734-4	21.215710033379	1.09661263643138	1.22406128542334	0.895880500012812	0.370316589857021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.723581231604105
Merged-chr6-59185458-4	49.1591917362139	0	1.33496545835065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86832445-5	16.9043729257153	0	1.34261593448407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107583001-4	42.7644192056591	0	1.33652278328793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134700982-9	136.264485183665	-0.125866108428124	0.192235991711199	-0.654747882057463	0.512630091268486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.25412240400015	7.13168472584519
Merged-chr2-84511712-4	23.0376195252967	0	1.34158584143846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144140043-4	12.07611037971	0	1.34901918170273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79599393-2	3.65032729864067	0	1.44062171464082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126582728-4	12.4837851328816	0	1.3452920654274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114336267-1	1.91869860150884	0	2.14992646170895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43380114-4	13.0294961550321	0	1.34371615656047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66474033-4	22.6726049803005	0	1.34151335464775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64923133-3	24.5744191394456	0	1.33607084518914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70601934-2	3.83208422280928	0	1.46813032226669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90235517-4	63.1530765161313	0	1.34178909039413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34858877-4	19.2600398610578	0	1.34302177597782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84993740-2	2.8362197659607	0	1.48224631934322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97206682-4	14.4571817709459	0	1.35539382565614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122762361-4	19.540064611854	0	1.34378495410478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191741220-4	10.6598987568587	0	1.3596901309968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70212778-4	34.3987143263569	0	1.33631626914758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105718419-4	54.7945456879047	0	1.33637645769403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23999639-4	23.8100117328788	0	1.3794095662388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184441390-4	20.6509909142864	0	1.33994846537777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82824487-4	26.9337588873479	0	1.33491338380813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137672062-4	28.6880655983898	0	1.34769981218905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8224951-1	2.80567578118368	0	1.41126812974653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63166609-2	2.36920501763559	0	1.81155081979207	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24950416-4	15.0991593970953	0	1.35915619623044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32223950-4	66.4943366870086	0	1.34252516103919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133402602-1	4.45362408675231	-1.83905527786739	1.08110617234848	-1.70108665078881	0.0889267172247647	0.845424662481718	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92435819090246	1.08976818821237
Merged-chr13-113485748-4	67.342116086565	0	1.33683065292792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17221699-4	22.682785603534	0	1.33935088629879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6366067-4	22.4563237950798	0	1.35714794263674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99390894-2	13.0399958544508	0	1.36714880348364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153784216-4	11.7621256547669	0	1.34771140558145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121584363-4	31.4205749259668	0	1.33710913225382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46141070-4	17.1249077623165	0	1.34416789988005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5571996-4	23.0042209913005	0	1.33653073900502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8811899-1	3.48651450365008	0	1.48589431846969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136689090-1	5.40781428862682	-0.885706908532341	0.712388080370676	-1.24329271212888	0.213759988807428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79643371288431	2.79676296757218
Merged-chr13-30565128-1	3.05653768037968	0	1.55712369316265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73491713-3	14.2989607624649	0	1.36569543578392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59343020-4	16.2110878812248	0	1.34187149828817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116627339-4	18.3129840250205	0	1.34485511876094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28319809-4	10.2780147376592	0	1.36155190769717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109299060-4	37.3047943677922	0	1.33958551344599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25178026-4	11.5713147800624	0	1.34291795243253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11781901-4	18.807207797991	-0.889542682689764	0.736769826608681	-1.20735493035089	0.227295484598227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44109637636472	0.897114879832661
Merged-chr4-133118319-8	95.3467295518831	0.116670045173636	0.21554855493521	0.54127036578234	0.588321243115668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14981964360119	6.27618107667058
Merged-chr5-115535107-4	26.437104453343	0	1.34167729958396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31801017-1	4.67998427427404	0	2.3790713295903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141477814-8	63.0855505614996	-0.382248180628049	0.22695814055728	-1.68422326553022	0.0921385285736916	0.863738236436364	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90566824699878	5.54561234418582
Merged-chr5-105624378-4	14.0316468662481	0	1.34684366523023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128840599-3	14.2213671403406	0	1.36183988407329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72796504-4	21.3590452594781	0	1.34136662545405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72144538-8	84.1999860649022	-0.349180888716692	0.241067940007489	-1.4484750178968	0.147484247808495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.16089816875209	5.78071780299471
Merged-chr12-100396896-4	18.4263338726727	0	1.34005997360013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63757874-2	5.17421218064723	0	1.49507081715875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35870831-4	11.1160832143684	0	1.34370321915706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170795993-4	28.1483246840243	0	1.3371217309054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-123934567-4	44.8363795514539	0	1.33569496405888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55658721-8	66.2218858223808	-0.426311928850231	0.241953676903744	-1.76195681051721	0.0780765949073192	0.78250833073672	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05588484538267	5.60994513314153
Merged-chr18-82635663-2	10.1211919496382	0	1.35658769825074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8870620-4	69.7529281836443	0	1.33746915399471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75195710-4	28.5955757681675	0	1.33660695911204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100183301-4	30.265916963294	0	1.33971944348784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92986042-2	11.3387092606526	0	1.38750335933382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84302971-4	20.9824334224726	0	1.34100639032434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81741211-4	18.7486306140525	0	1.34236173399731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86168757-4	22.1493683664274	0	1.35031281587371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73680414-4	14.122522905989	0	1.34757125832746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95210379-1	3.73831380117041	0	1.42382900405221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4145144-4	15.1318665608962	0	1.34505525536737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8122093-3	6.53005880500446	-1.33925069257681	1.32150722174191	-1.01342669229724	0.310856395160002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr9-124126613-4	10.4516461841459	0	1.35191525560341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79237823-4	39.7327524697316	0	1.3397918493967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52455772-4	15.3821568715707	0	1.34647088870072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89233647-4	14.1409141386783	0	1.34118378545431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180313073-4	36.742938830359	0	1.35011612413083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140784810-4	29.2682023261726	0	1.33520351709985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-134697716-8	62.9296901123146	-0.622643325234142	0.254317578070478	-2.44829055843553	0.0143535852550315	0.259304267490282	C57BL6J_F1_Control-BALBCJ_F1_Control	6.98459379729475	6.19548801403426
Merged-chr2-22589770-2	28.010116717038	0	1.92087533896896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67566890-1	1.89765564721781	-2.51847714353625	1.46388218231135	-1.72040972556943	0.0853579903832819	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0
Merged-chr11-30102823-1	2.49140193778766	0	1.45884740371509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83717232-4	16.6549602582274	0	1.35980483913595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167358607-4	36.3775317723204	0	1.33909265716639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25269835-4	70.0704750336545	0	1.33997078366578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59864084-3	21.311887141794	0	1.3369733861935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30648793-2	4.39598327856326	0	1.60977979752706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31052639-4	27.5446988813228	0	1.33838191588784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11573863-4	19.1237201098581	0	1.3464719964908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33170999-2	5.54865006258676	0	1.42840279572825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92676004-4	10.079548456589	0	1.35993680655075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8734007-3	7.44230127013765	0	1.36656451031903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33891782-4	34.0380508926008	0	1.33192876781057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120472114-4	21.7978501258091	0	1.33972050000247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80765427-2	6.46062348547314	0	1.42327232850229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25279019-1	1.99602098107357	0	1.52795568231947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107327561-4	39.9009369839413	0	1.33971402440635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121597401-4	47.0762296091965	0	1.3400830892254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41350012-4	21.3179661041504	0	1.33547410391536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121583225-4	21.6553882337506	0	1.35152933324721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98611982-4	41.7883619440433	0	1.35821849850829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89727255-4	13.537850277227	0	1.34696175999351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54958122-4	19.4576055852276	0	1.34352495867272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55698780-4	62.484096659651	0	1.33970711403915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24105516-4	42.7881499458609	0	1.33463969082018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91086525-4	35.6724791732678	-0.214479956296654	0.575113203872145	-0.372935197544752	0.709196674851779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34574658350842	2.31445505375209
Merged-chr14-31402210-4	21.0272731707739	0	1.34256196423645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-6542341-4	21.8584023460629	0	1.33787517457216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17410972-4	14.6300488480872	0	1.34483937289991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85505135-2	4.06801449426649	0	1.4264148942823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75763445-8	173.578147696712	0.574668275321361	0.191194391954887	3.00567537282661	0.00264991737324039	0.0771955297384642	C57BL6J_F1_Control-BALBCJ_F1_Control	7.37250731035616	7.93739317378857
Merged-chr18-82967716-1	2.49473725248765	0	1.55770264673194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40953388-4	19.0791103309913	0	1.34205442525636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73381783-4	32.5537484838131	0	1.34401218108205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89644335-4	23.8868920086687	0	1.34312773624003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184657516-2	6.9524565581951	0	1.4338213771726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136123249-4	27.2163246555821	0	1.33708517264584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151287737-4	20.0366324875064	0	1.34045465146195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47523614-4	14.0854228048205	0	1.34165593389027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36933803-4	37.0641411176632	0	1.33984518153196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54277376-4	22.7737098138828	0	1.34374103854261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31766973-4	12.5829284179205	0	1.34059457281443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85541373-4	33.019522140639	0	1.34164905426952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117079906-2	4.96456089621106	0	1.50416151154597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95664677-1	6.59047953820299	0	1.40523699460337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-20122312-4	42.0550184323615	0	1.35752819340259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24577975-4	16.5442085160572	0	1.3472641322612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53249117-2	5.2634041140917	0	1.45663048213177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59888008-4	22.8046876128246	-0.338876521059682	0.695188688343637	-0.487459774219129	0.625932542674612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57928534738074	1.45526469271556
Merged-chr12-75856665-1	2.55918126336148	0	1.40039461866271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133345628-2	13.3447469787182	1.50392422577617	0.572890444841359	2.6251515264714	0.0086610413921561	0.182897476263409	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62387134283864	5.1020486632652
Merged-chr8-119426649-4	15.8733181448095	0	1.34183207690017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144044622-4	32.3803740483867	0	1.34202227692688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10392895-4	30.1390107099482	0	1.33773904511774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31392989-4	46.8288978774422	0	1.33492228290711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53928116-4	34.0020045421286	0	1.34276827028332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52873499-2	3.06006780943329	0	1.50462049222399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35860330-1	7.17639421508241	-0.529638486908702	0.776439936293177	-0.682137100568607	0.495152262934847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19702738253442	2.4385152449826
Merged-chr4-63409514-4	35.9715838842706	0	1.36608756212846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166745988-4	12.8532682513959	0	1.34469462843739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82855195-2	3.56192476502914	0	1.48688096001821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21463505-4	31.9322046572912	0	1.33473257460139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90067607-4	21.6454435435122	0	1.33878598034357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17180930-4	15.5964283600487	-0.760283023139739	0.611055197005755	-1.24421333271564	0.213421058036919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33614760192983	2.50022049925494
Merged-chr13-51323285-4	15.9913816163893	0	1.34331744375855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31084961-2	2.62975053844865	0	1.62582310526522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51704118-4	18.2580763834191	0	1.3409656628559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165731713-4	14.1901988813805	0	1.34915338210697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34274603-1	1.7695745973872	0	1.69850538491727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9818412-1	1.32825449770439	0	1.8667211944021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152029382-4	15.6041863080383	0	1.33859382557205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24632272-1	1.49028447001462	0	1.59741792976725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10897550-4	21.501646669214	0	1.34678773268563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91080523-4	78.3437515136409	0	1.3412016612578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176827656-4	18.5928892934169	0	1.33930674643546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13304855-4	37.1480491180915	0.424105205628626	0.836177765777948	0.50719502836105	0.612017983040737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	1.82415053547332
Merged-chr10-122900722-1	2.78871134883206	0	1.52918788520593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34973437-1	2.80494354173805	0	1.45924760904902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25401709-4	19.4255600132141	0	1.38015712170366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16084475-4	40.6864493584174	0	1.3344036126866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92899808-2	2.95941196722265	0	1.57069858896129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47224935-8	83.6355862734802	0.257699205660751	0.191490894845977	1.34575174379976	0.178382592807394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64847534882303	6.87150641199356
Merged-chr14-20298314-4	16.4791388450407	0	1.34053276322149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55155222-4	23.877371467707	0	1.33549341970298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16135646-4	11.9804764507205	0	1.35370506300376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101115777-3	10.8693030448155	0	1.35670146400366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120686299-4	53.1050334614297	0	1.33688989320713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62649799-2	4.11473157959767	0	1.43782415741803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111465024-4	13.5612567703664	0	1.34803178741371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129496839-4	29.5254126145666	0	1.34510806700559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99383037-2	4.9778412406173	0	1.41616628679395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55023227-4	32.2255747172596	0	1.33963961386372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64242711-4	60.333964197437	0	1.33710244738454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61374310-4	13.4599781521664	0	1.34706646158181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88589226-4	21.935048043426	0	1.34774065967626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136684733-2	5.19161901969194	0	1.42915130927262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88210306-2	2.75645577208668	0	1.5804912644465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25812416-2	3.58224800366212	0	1.40337800141807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83645424-4	39.1751904630563	0	1.3388198850612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61054698-4	24.9514567959614	0	1.34048076464335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73017837-4	15.7339961158672	0	1.35979112474627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71251497-2	27.2616102582795	0	1.34244466534116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-123193087-1	2.31038369882658	0	1.51826829609592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116013870-4	16.6474536323256	0	1.33842027506201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33245121-4	13.7509239002562	0	1.34919663134425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93071617-4	83.4144048803451	0	1.33843840869293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70832780-4	70.9837824354127	0	1.3405315403403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36326019-2	6.97738603394719	0	1.71117588953628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103051556-4	19.378454954232	0	1.33958096927349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51982437-4	11.8946680048529	0	1.34499397262426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41373043-4	13.2148658263525	0	1.3408606171692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83572432-4	20.8511680942209	0	1.34087601614676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13889614-4	22.4990928512675	0	1.33942217210274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-34300-1	4.99937144742056	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50697899-4	34.9536639362698	0	1.33682742915821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67305039-8	135.674270243554	0.444366271288542	0.192302093405548	2.31077188718592	0.020845458110284	0.329622943452264	C57BL6J_F1_Control-BALBCJ_F1_Control	6.9999407502031	7.50036490598789
Merged-chr11-103960555-2	3.03886084775456	0	1.52476188468706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23023960-4	11.8048815440041	0	1.34039691675459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72037801-4	46.29398526478	0	1.33500198377274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82876448-4	17.8313340109734	0	1.35648099390037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76943722-4	14.5986732987531	0	1.33696449535997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120720062-4	19.4336126739683	0	1.33800382375894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59727629-4	16.1337891948044	0	1.34142720883172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55466463-4	21.5471135996799	0	1.34321483834711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60367479-2	3.75782118464123	0	1.42968630644281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44199235-4	31.824762113774	0	1.33778455172909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8760045-4	30.744713803426	0	1.33567064197048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29787068-4	19.7483890502791	0	1.33667568966917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117979626-2	3.67996776565286	0	1.45297228447336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66748577-2	6.32800617464957	0	1.39991308418142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-26206199-4	22.35195428139	0	1.33529797940037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96856723-6	37.4424112041169	-0.408976730242185	0.409179289913128	-0.999504961086896	0.317550137010048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15089887827296	3.8081791669166
Merged-chr15-98512984-4	62.5358243221416	0	1.33579541669861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64402098-8	85.7726054582033	-0.113113633877782	0.237051082288405	-0.477169868982768	0.633241165125851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.80695367721618	6.70707304975131
Merged-chr10-41573371-4	32.5222332345276	0	1.33910273022588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44582859-4	14.4782213390588	0	1.34587636512763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76337145-4	60.7660923300996	0	1.3369221830407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36129382-4	27.4191343222426	0	1.33724221568465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40666002-4	15.0344378078188	0	1.33852002294687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126833193-4	21.728792106953	0	1.33751857042757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43512236-9	247.269771610721	0.248798386101989	0.162213922634714	1.53376715180148	0.12508694678559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.38449656668101	8.63189999431796
Merged-chr14-63135492-2	2.94456781916393	0	1.4477315917417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98674885-7	24.6503037575113	0	1.33383242639899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113591547-4	47.435550223173	0	1.34153643329375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153558666-4	25.7130507982749	0	1.35139847718947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52921499-4	14.4036344915479	0	1.34142704285635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14148133-4	14.0618738117241	0	1.34425147806428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67689803-1	5.1334334902692	0	1.38218493321314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111430020-4	31.8379073364551	0	1.36674102709067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83604824-4	25.0264614825561	0	1.33758017877107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6267758-4	40.6275431040625	0	1.33401810813621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74248945-4	56.0851667425503	0	1.3354502392792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8357381-4	73.2488777729119	0	1.34581004996889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26601876-5	50.8449031573464	-0.445421545521513	0.760014070084517	-0.586070130875314	0.557828387505088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.578845274708	0.788686275880602
Merged-chr3-88403670-4	26.7954898500178	0	1.33615606613991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44394135-4	17.4398334257991	0	1.34933970105736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57962684-10	97.8016064923325	-0.0984398805942383	0.178818159494425	-0.55050270550015	0.581974621728967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.82297145471956	6.67296450600621
Merged-chr9-7336928-4	17.9767193335356	0	1.34154555179279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55757352-4	26.0769232094068	0	1.33801580078017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80172728-2	4.96826240123029	0	1.41860606154379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3856248-4	27.0202683316136	0	1.34078284852274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6260478-4	29.69780211931	0	1.3341954100237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46887498-4	17.8439814051282	0	1.33678525024507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125224621-8	62.2824208608863	0.146355778041784	0.238024693350219	0.614876448244984	0.538636317570777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.99207545835279	6.15826541991079
Merged-chr10-80199645-4	9.61176400056428	0	1.34152325153702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27413979-1	2.52554821675013	0	1.47305585663392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173622400-3	14.8175958869483	1.48175876276479	0.933809455725755	1.58678920381372	0.112560394819336	0.978463546254724	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	1.91540923488129
Merged-chr12-40017157-4	17.9189316712587	0	1.34306803457385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80839149-4	11.8624053474404	0	1.35044102748794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5930397-4	45.7422620619502	0	1.3483449657854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57660085-4	14.5423904408192	0	1.34573281664989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50109009-4	44.4090741021184	0	1.33664754879036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84426810-4	16.1392056206509	0	1.33813266810498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124052387-8	99.9101634787269	-0.28119232877834	0.260735213102872	-1.07845935127833	0.280828812648155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.94200571154364	5.65479179105059
Merged-chr4-62283094-4	27.2261110986485	0	1.3420055870753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38809572-1	2.10076588336346	0	1.45285315817701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111160181-4	45.9962183745885	0	1.34120437099849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105263767-4	80.0725938411336	0	1.33560630103372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78631972-1	4.87696362763088	-0.644829019654454	0.96788988987428	-0.666221464239296	0.505269555354416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	1.18909650862134
Merged-chr2-13399038-2	4.10838745264441	0	1.40320513624492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126476082-8	59.2331490241999	0	1.33396609274093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101447922-2	4.67754677639405	0	1.41442542973496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43900913-2	7.73696838036601	0	1.47822008696579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44234064-4	37.7109357917024	0	1.34244895138917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71264973-8	84.9362762438913	-0.402185266718441	0.190839833460525	-2.10744926478692	0.0350786550945177	0.469087481496406	C57BL6J_F1_Control-BALBCJ_F1_Control	6.77688625407733	6.42479316477022
Merged-chr13-98031896-1	6.16124307634949	-0.0255335792188522	0.797440170930284	-0.0320194293561422	0.974456556455338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70417518302649	2.69651048210426
Merged-chr5-72817880-4	21.548927094553	0	1.34359316023978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50276062-4	20.6108093421901	0	1.33585331555645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122821391-4	12.4943585050074	0	1.34301633379464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126583100-1	2.75642859113821	0	1.47365507894646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155568288-4	16.3590988874891	0	1.34054482886297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88053918-4	13.557518472543	0	1.34615955905639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92676430-2	7.39222557841362	0	1.3634460933294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21032351-4	58.2266743791969	0	1.34027924673406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126921016-4	15.422292129569	0	1.35268809574675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27481756-4	20.2730484397522	0	1.33701090128002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5592630-4	20.0242398181837	0	1.34620355259084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19326003-4	29.4037578624138	0	1.33458833966454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68417975-4	21.6334742106921	0	1.34269181837705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12758157-4	48.2918944518915	0	1.33345279318755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86513488-2	2.80970434110063	0	1.49038625378182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38394348-4	68.2265565524258	0	1.33776248333807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117888275-4	37.0172770359432	0	1.34296088057685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116667613-2	4.23793783517138	0	1.43480361042695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39710841-2	2.45786160223348	0	1.66437634348913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66940555-4	17.462437471101	0	1.33819686759876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47757272-4	32.7030419504895	0	1.34244030859899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152904319-1	5.34752632495243	0	1.45845268607941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96544248-4	21.3565383344455	0	1.33998523879809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149393585-4	22.0963000998482	0	1.33833960025292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61385990-4	42.917014219549	0	1.33677833542418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19347513-4	19.2331396365178	0	1.33924258423706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124385853-1	1.91900508904897	0	1.47494897139182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16213002-4	47.8980223717651	0	1.33739290770965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145293407-4	26.8090196876377	0	1.34262317611087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108911092-8	70.2590109699684	-0.0829950536899477	0.232037341728268	-0.357679729787375	0.720583004169517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05065658155103	5.96629912309766
Merged-chr8-84567210-1	2.41419532895031	0.605040655588935	1.13804861684003	0.531647459199875	0.59497018798354	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.70054887545773
Merged-chr7-4653972-4	21.6799217106304	0	1.33695907881225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14250351-4	27.8335759501853	0	1.33473048426667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114894024-4	44.7669007622777	0	1.33894116205627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30672092-4	11.6530644336997	0	1.34472205990064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148568055-4	23.8452849895307	0	1.34112436940357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103691726-4	21.8721572947937	0	1.33602346583451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29431166-4	21.1255631121845	0	1.3458697600559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-15066619-4	37.2746726010225	0	1.34772575935594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65450880-4	26.6289486017029	0	1.3421337328322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39544374-8	126.341483179569	0.472464152646772	0.170656991140393	2.76850159779328	0.00563147095093583	0.134855123093357	C57BL6J_F1_Control-BALBCJ_F1_Control	7.28355353752034	7.76111573335594
Merged-chr4-32250486-5	74.1425706731279	0	1.33424694220874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121491082-4	33.2523132389333	0	1.33621167199669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84766462-4	17.0233904317854	0	1.34189927060262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-116565104-4	22.1512296024845	0	1.33878756904074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43747981-4	19.0424129478827	0	1.34052277007007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29809546-4	13.0723110188503	0	1.35007770773253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166730383-4	39.480458998136	0	1.3346145420563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148311036-4	20.9227924554283	0	1.33932995626244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65247456-4	19.6590302451215	0	1.35891747799182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51459802-4	29.1280070630978	0	1.33577979586686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4545648-4	22.5567491933088	0	1.3361700176267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38497778-4	15.3398363850007	0	1.33997420793689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72184173-4	27.2772364637641	0	1.33987102663248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101741666-8	97.6699465794098	0.328120110716531	0.177076763430932	1.85298231320177	0.063884893769636	0.693295855544748	C57BL6J_F1_Control-BALBCJ_F1_Control	7.1594693812037	7.49032593587248
Merged-chr12-100204047-1	4.22946918947809	0	1.38426231242511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3654000-1	1.85709819834015	0	1.66114662108352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29210146-4	15.444935752505	0	1.34272736531589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-51934198-4	16.3955433923774	0	1.34351567610322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78072474-2	4.79789921964555	0	1.4742538544714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-18781434-4	15.1903837931338	0	1.33933703489848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95674238-2	3.66109953989403	0	1.40467883959821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38483533-4	32.8388856598763	0	1.33675891531362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46849055-4	11.3743660589071	0	1.34389176323794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51499327-2	4.05286840822707	0	1.42286990553744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64615627-4	16.5543905276961	0	1.35123430119684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120042927-4	24.9285648987007	-0.0340750841550514	1.26571298346073	-0.0269216517491057	0.978522224176431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr16-10976280-4	77.9436629274985	0	1.34009160610841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38459685-2	8.05756708939868	0	2.14509124084464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46554814-8	209.273215065902	0.372568670760545	0.159220526867486	2.33995376155627	0.0192861274564231	0.312574419321319	C57BL6J_F1_Control-BALBCJ_F1_Control	7.88579633353801	8.25992397045137
Merged-chr17-45583008-4	22.3514327585406	0	1.33801091382765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160220745-4	19.4285862076194	0	1.34932274169138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87842337-4	14.284023708658	0	1.34390302523433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74920873-4	14.84505158098	0	1.34188701560413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33315418-4	28.4027260207031	0	1.34384979886147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54885104-4	24.5290761904631	0	1.33920286832816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135914441-2	10.7963895180876	0	1.35771746418175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33089851-2	6.02679329997882	0	1.37493260551325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120835571-4	19.5680505868907	0	1.3448427107084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6869541-4	34.2957917828638	0	1.34021394602828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52378604-4	15.1804505952109	0	1.34331723754209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29241720-4	33.5220276910095	0	1.33707063711538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70871025-4	15.9974827301714	0	1.3362681502748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108761380-4	35.3244119454147	0	1.33322876577642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81051742-4	55.6508309272012	0	1.3384657246547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70785543-4	16.2138769819706	-2.4843462718707	1.13906926708993	-2.18103178063758	0.0291810659290591	0.416813280580524	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0
Merged-chr17-46879986-4	26.308166489727	0	1.35057121301822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69201553-4	20.6627695068627	0	1.33525678500426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25532322-2	12.179237328276	0	1.35973168480793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43667100-4	22.2336996060299	0	1.33812598465336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11454088-4	31.9261134885019	0	1.34043143664745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29523613-4	22.2107080168342	0	1.33770727955199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_GL456359-19543-1	14.4001937488743	0	1.35115329071884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141210690-1	2.13607410097409	0	1.49055973302306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72139701-4	49.1880069690633	0	1.3446207057212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79076699-4	9.72885219495185	0	1.35499236342502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27536783-4	34.9957816074652	0	1.3361153639471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69008052-9	82.1501638201694	0.81921418453885	0.178469199753681	4.59022725304709	4.42763680483154e-06	0.000454116809573278	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56317737858895	7.36908405250419
Merged-chr4-63316236-1	2.0311354114975	0	1.51206644275515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5931805-4	52.9857359090528	0	1.34239498832961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54091824-4	44.532559156457	0	1.33569377711015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166662969-4	17.0555639222574	0	1.34194105817941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166339343-4	30.6888403320245	0	1.33985853791941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47156383-4	15.5693950400373	0	1.34477885288674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22822505-4	13.1373870123748	0	1.35196636551138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-68213989-1	2.90463377760429	0	1.45558950692107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34182128-1	2.08291320710461	0	1.49534224731074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-143344702-2	2.90452627743591	0	1.55439585026526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-24645-1	8.05642646096022	0	1.37577273246938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32516921-4	33.0515460057942	0	1.33411284409228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74932164-1	4.61662903249185	3.83765091113685	1.25631577879475	3.05468654928342	0.00225295851778603	0.0683418370917024	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.02281613395775
Merged-chr11-54934385-2	10.6119820949253	0	1.41964723552036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70588087-2	4.40072767017848	0	1.50733931082399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112316712-1	2.18223462459095	0	1.53353156460221	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95828225-4	15.6190749369451	0	1.34234928234785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142021433-4	24.9533497418818	0	1.34144742104637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115427570-4	21.4531479926739	0	1.33820060974686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13537904-2	7.06014411249413	0	1.356459524825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75087839-1	2.18661822557306	0	1.43897780081917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116669141-5	44.7123062655349	0	1.34402832975485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99234636-4	20.3043693867885	0	1.34394812526967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107724939-4	35.4166326092699	0	1.3350275222571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50471420-4	15.004915333072	0	1.34488730539182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86046341-4	40.1724003111636	0	1.34238364839471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50982858-4	23.6212372883652	0	1.33710061814545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157010275-2	2.83481083665166	0	1.49446546438846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139199828-8	55.0901051963826	-0.0754010112803283	0.226420491432558	-0.333013195065816	0.739124322877747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.88478376002415	5.82950921187681
Merged-chr4-133159866-4	23.5685124677147	0	1.33821777229798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37586301-4	28.6604417874901	0	1.33890300874984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71193411-4	28.6016518680603	0	1.34316592604241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62460998-4	12.4823099988047	0	1.35038151082065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35127332-2	3.85112141047753	0	1.49990349573283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-59033659-2	8.3858866861961	0	1.36644166745477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-26360526-4	27.0607821595187	0	1.33694427221624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30584040-8	36.2869506949149	0.235158757248975	0.304059639904289	0.77339681558196	0.439287573992326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35725181084722	5.58468603685532
Merged-chr13-9150185-4	30.3368966454982	0	1.34973241069342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191724861-4	12.6072248477647	0	1.3504123550827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60738098-8	102.187688782062	-0.330333569124287	0.191221377985248	-1.72749288078956	0.0840791826533354	0.817759937350628	C57BL6J_F1_Control-BALBCJ_F1_Control	6.76094199054131	6.40872269710759
Merged-chr9-71144666-1	2.05373671592689	0	1.78647949187924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43138576-4	38.7820161501937	-0.0368726893677019	0.525169286562687	-0.0702110544373973	0.94402567587185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97400306278741	2.94002263438064
Merged-chr10-14475071-4	24.0480954625598	0	1.340164010462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29940467-4	60.6452497587702	0	1.33741045733954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6773459-2	9.4240252630945	0	1.36445017437297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20562444-4	21.2954860123511	0.378421520993408	0.628539821341906	0.602064512293737	0.547131195710529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00129118555875	2.28242002473277
Merged-chr1-58724270-4	29.7332126694049	0	1.3573244211106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117976240-2	2.59679817282205	0	1.49486296132339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125539531-2	9.32013371982775	1.77425636489032	1.3246929484021	1.33937178953848	0.180449668475922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr7-19332956-4	46.1093709195896	0	1.33891609359341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21636879-4	13.1436651852174	0	1.34118603842043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12735895-4	35.0635484057335	0	1.341789966191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51063480-4	16.6746444678688	0.629560447060046	1.00024591724153	0.629405665355021	0.529083509940316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.18909650862134
Merged-chr14-103826539-2	8.70068564769825	0	1.36434230099517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95805229-4	40.7923755568964	0	1.33851104950983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39655333-1	5.85432966646206	0	1.36919601456499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8443704-4	26.8049106066572	0	1.35077722655884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25516699-1	2.11470916078494	0	1.41394274555771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8535031-8	68.574210260638	0.321481205194474	0.216856152764613	1.4824629188337	0.138217163162156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04346844544483	6.36486701431975
Merged-chr17-17867234-4	49.0543364832056	0	1.33625934372241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78267668-4	25.0324555928772	0	1.3450741065933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116319602-1	3.58428735420824	0.232730129831797	1.1246330557651	0.206938724269907	0.836057713437868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.17788344834821
Merged-chr6-29246759-4	27.2581656689638	0	1.34170220263775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142921253-1	11.4952223055174	0	1.34806272385994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31386234-4	43.806309137509	0	1.33853949967176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52955264-4	77.4011805159876	0	1.34024689315826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106815513-4	28.4927058537201	0	1.33420945997675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30977416-4	14.9387395848543	0	1.34301568546109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5447008-4	26.5197076567289	0	1.3372457827693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99695569-2	14.1712707647222	0	1.36483887295208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133159267-8	84.483632487441	0.405760487074109	0.183688640090925	2.20895797842076	0.027177563867792	0.397670308018656	C57BL6J_F1_Control-BALBCJ_F1_Control	6.43772328843243	6.86106936532496
Merged-chr10-79780275-4	80.4638371384627	0	1.33836694805788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29228370-4	29.0558363259659	0	1.3438737837656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38602364-4	26.9352084939147	0	1.34271208896804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55641074-1	3.82873242660609	0	1.46372821530827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3170696-3	12.5334182601072	0	1.37413940390021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103530060-1	2.68468010451865	0	1.49815220241939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6816417-4	51.9874696700647	0	1.34059680189877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-81585347-4	19.2148638370295	0	1.35000001190805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54948812-4	31.0291901502549	0	1.33880541138245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115075571-3	8.69893379337945	0	1.35712536634669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65741668-1	1.99997892480621	0	1.76664297763387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132006710-4	62.0585931604193	0	1.33658472119262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152582115-4	11.441746945941	0	1.35190486125308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85838218-4	25.7414545415046	0	1.33596714147464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50960551-1	2.36957840352227	0	1.70803078257524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-7755688-4	24.7164030348283	0	1.34203045685878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4969630-4	11.9986103990058	0	1.34953070887641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20415401-2	3.20100764713409	0	1.49724288557306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125361180-4	13.2773356231949	0	1.34056353219558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91706266-4	35.5649816039617	0	1.34241032092847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138322855-4	32.5241556207396	0	1.34108966185086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97373990-4	17.997655985747	0	1.33768895670397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66375874-2	10.1857454405018	0.356874252453417	1.19066268685695	0.299727417674838	0.764385083276068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.13743241080208
Merged-chr8-14675712-4	50.566288835809	0	1.33809594960952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43914639-5	35.3838965527937	0	1.33464486710146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137076320-4	35.8975915805461	0	1.3368146575477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99499557-4	15.3763252327921	0	1.33903128485127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82007090-5	53.6463122316879	0	1.33339988057426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91398240-4	67.1365305375236	0	1.3394151210468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48962752-4	50.5052863134337	0	1.34543239185803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111511805-2	5.7004044461188	0	1.38625838539549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180300464-4	30.4207682057401	0	1.33947487463182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100059473-4	36.1129683144052	0	1.33619363564116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162388736-8	79.6783828512767	-0.714692245198673	0.260337951877267	-2.74524801338072	0.00604651828337238	0.141186721377079	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78605095471339	6.13889512359592
Merged-chr2-21091181-4	16.5244240082847	0	1.33918623346076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63371104-2	4.21232467005382	0	1.47855013672085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103197535-1	3.96021825733631	0	1.41468433931737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-77833606-1	3.5489812285108	0	1.46324917187696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49825029-3	6.10633654321522	0	1.40600434508003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86400221-4	28.8722736663124	0	1.33874450735694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94584577-4	14.694852426912	0	1.34278829781854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67380848-1	1.5852968664515	0	1.66953397362583	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70263588-2	3.66807398507743	0	1.5179580962828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52236325-4	37.9517849351723	0	1.33413447224763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126137968-3	19.1843096991271	0	1.40112278767399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119792049-4	23.0258679874942	0	1.35216650617417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124711248-4	25.727609890845	0	1.35040767837497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3791942-4	35.6854872471747	0	1.34156801150975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90696293-4	46.8916254212576	0	1.34099612436571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35438445-2	2.22816956159526	0	1.61636239169484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100184309-4	81.1886231450802	0	1.33687513660788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12159504-4	19.7160596596186	0	1.34871588599263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11192964-4	10.9618506841347	0	1.35412651852316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11730333-4	49.8807182657549	0	1.33810665890133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125482991-2	14.911909902988	2.89675311784106	0.94670778968327	3.0598175587107	0.00221471858115973	0.0674274860703971	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.5038644118617
Merged-chr5-3494678-6	40.816172501738	0	1.33692791744186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167805104-4	27.0419245466477	0	1.33471135934997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34481394-4	10.9059275543988	0	1.34609008342639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38436077-2	3.95743356900142	0	1.39939372151046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184536575-4	23.8017164854439	0	1.34075311407391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15829266-3	10.9594141803902	0	1.36403665942079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40847405-4	15.8467803713247	0	1.35481895067042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55147045-4	44.0068597690211	0	1.3345322760965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13416956-2	5.58718171773856	0	1.45180034447664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35496758-3	6.11655339178699	0	1.37142866168145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9390352-4	20.8125419567302	0	1.33972310394251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112735234-4	13.4889240555743	-2.19455701696837	1.19174204178625	-1.84146983157449	0.0655527376338773	0.704566657599323	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	0
Merged-chr5-147542468-8	76.3908953476506	-0.000797447735996984	0.199181443165459	-0.00400362465159242	0.99680557823715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.4325733889179	6.43012997838313
Merged-chr11-106741450-4	26.7448769714288	0	1.34135925061265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155505186-1	2.9413645949953	0	1.46271581981789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84027820-2	4.55423791704915	0	1.42676731819823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145258253-4	55.2969737959042	0	1.34089963612876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70477734-4	24.8395555572315	0	1.33981494324585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64374122-4	30.4839327555752	0	1.33800512658565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61642353-4	14.5345909422419	0	1.34289996783543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120394980-4	13.8153956471795	0	1.34759438648932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60935774-1	7.24076562442251	0	1.36648451995566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132618057-8	60.7722589397781	-0.188842007438733	0.252361579104473	-0.748299357251034	0.454279612127266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.72755695222779	5.5241111962425
Merged-chr5-19891895-4	32.8293823807026	0	1.33590185526946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51558535-4	24.0588487827584	0	1.33624409822766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117252510-1	7.92925319976628	0	1.35777438298584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35634030-3	13.9167840790858	0	1.34184273598424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120564761-1	5.01580242342286	0	1.38193153301055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9107514-4	18.0904100634716	0	1.33900804564976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66438063-4	23.2539982980223	0	1.33899132863676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119310185-4	16.2307550432066	0	1.34210600006596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40244264-4	23.4924930106426	0	1.3390800310239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67526757-6	41.461411470767	1.1827155520849	0.417404650298512	2.83349874333951	0.00460414889992869	0.116245671180318	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60391341779232	4.38322102249069
Merged-chr7-55857904-4	17.8239174586256	0	1.34072771582987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62770812-4	13.530426428344	0	1.34243491876242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-148920488-2	4.68664179201014	0	1.46473931765583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25281647-4	66.636530600542	0	1.3341543726738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103029482-2	9.10825732850284	0	1.6090728020743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77206751-1	2.56031806811678	0	1.55098739367792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57799669-4	20.6716379261349	0	1.3408599954587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-21725472-3	15.2748609403787	-6.77813254412409	0.98512765191919	-6.88046115741364	5.96591118241091e-12	2.9752382198594e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49946034489251	0
Merged-chr1-186204357-1	1.54014863026171	0	1.52753501526278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9131208-4	46.8136626756279	0	1.33809315680581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43093839-1	1.50387932893041	0	1.63001430198664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88826245-4	25.3557572201335	0	1.33667554140152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95612169-4	20.7183232912335	0	1.33741433141988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132269417-4	27.5520795282232	0	1.33561198692991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38650964-4	15.8051402912459	0	1.34154788768203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133659995-4	25.5138159491716	0	1.34789191710998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15228725-1	1.59424906334169	0	1.62060330144174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6623866-4	52.7503850323886	0	1.34187120524802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105420910-4	25.5241000519793	0	1.34410019340765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29180211-2	2.65973761778347	0	1.5393172711276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16407940-4	25.6897368304676	0	1.33948990288285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83853969-4	18.9883039955477	0	1.33875913773446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7914061-4	20.1505258403591	0	1.33701829469956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95210239-2	3.83940087606928	0	1.58779707012847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79884149-4	22.845908554778	0	1.34250295500596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14372443-2	3.39236845115306	0	1.37686583593692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157363171-2	8.12446648903353	0	1.44776167363217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51832700-2	2.66699518998392	0	1.44526638892892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122328093-2	3.74661822402689	0	1.41771566745727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17222354-2	7.83591889382839	0	1.41797191175276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112785224-4	15.3657511857364	0	1.34050862332246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49158677-4	14.8849094315146	0	1.33827620434696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90235008-4	13.2820072344124	0	1.35866668853354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75254712-4	14.5218393285271	-0.548616308195828	0.729536407475927	-0.75200675740632	0.452046995090632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	0.993299420549897
Merged-chr1-171006532-4	11.8651277255458	0	1.34127088945989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15179655-4	20.3219626090381	0	1.3363120654574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94059772-8	70.7342602216962	-0.093123789551836	0.22472947738052	-0.414381729701419	0.678594567117884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89299201542343	5.68165468546185
Merged-chr2-52941855-4	30.0955577316165	0	1.35345448097229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46341402-4	33.7844025611077	0	1.33415786092983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22121368-4	16.9549584190896	0	1.34640862703801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56598363-4	18.7890366288771	0	1.34053118103241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58211573-4	19.7549910497656	0	1.33912156953644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62393658-1	4.18117152319846	0	1.4070745659755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5957294-2	3.66780364565772	0	1.51975355537294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63316518-1	1.77466053945314	0	1.91501840128087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65542390-4	59.5462635344546	0	1.33729821995024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108428458-4	20.192017663387	0	1.33581089917447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46240098-2	3.95180760358262	0	1.42953067035643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58516527-4	30.1908746981441	0	1.33477818254477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128554714-2	2.85843638253087	0	1.54621212324922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183980030-3	53.3958488749667	0	1.34068523613173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23751385-4	18.9480295199454	-0.848908772195331	0.74485437198093	-1.13969764309454	0.25441228943325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05684565946125	1.39949824061849
Merged-chr9-109000917-4	8.82175457562191	0	1.34794688531001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9122860-4	33.7133694667522	0	1.33383416684319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35027179-4	33.0700494009203	0	1.33770135752302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6572506-1	3.3372525156132	0	1.41307745616881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54755171-2	7.48959447561304	-0.642607541868122	0.995044059250279	-0.645808128689595	0.518403623035963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.97908007631626
Merged-chr14-31482574-4	16.5490396691724	0	1.33892523119973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82761619-3	11.3604749637727	0	1.34169255207053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116177212-4	24.9848439559818	0	1.34810075934892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34846163-8	83.6820435664847	0.286322047908036	0.204822651987326	1.39790225900284	0.162142420225231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.45954468288677	6.68984131591961
Merged-chr8-125117166-2	14.6038026187992	0.00575926710424888	0.637219515686097	0.00903812102811675	0.992788720951849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58147280816694	2.42345445095442
Merged-chr12-119139665-2	4.01746955986863	0	1.64078607785015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115847556-4	42.9177737129523	0	1.3386033677577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99448937-1	2.58876223403532	0	1.52259754100257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53823910-4	46.9031683468703	0	1.33615977414477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41595792-4	30.0357459969182	0	1.33479251301843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84126331-4	20.4571079559242	0	1.33920617374295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20930787-4	16.7246764900332	0	1.34072246538927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35998284-4	14.2711840311384	0	1.33926494946272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99229619-4	20.5709663029524	0	1.34672983786686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-12455326-1	1.4714878122277	0	1.58590654759572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55296482-4	35.1505625063792	0	1.34462281403935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84562015-4	40.3300694975564	0	1.33662722307348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22698199-4	20.8846724494807	0	1.33642172134157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89861317-4	39.6395589045068	0	1.33957292104198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77293000-4	20.0008417588098	0	1.3399961451928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99043548-4	21.200950470887	0	1.33818175705137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65415780-1	7.31970552585579	-1.11351042598539	0.879633877696237	-1.26587942349568	0.205556254223008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85512649579074	0.94927122251658
Merged-chr6-71452969-4	19.2065358623573	0	1.34763835492698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61394185-2	7.8329394375299	0	1.41430895374001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82793292-4	21.7306462758417	0	1.34429194581986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88515842-4	17.2025935451279	0	1.35082724377961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51531058-4	44.2988696184576	0	1.34098949898582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113661692-4	28.1972099686949	0	1.33930067378726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-114934310-4	19.5173376839242	0	1.34074446008132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191075427-7	63.9139669708994	0	1.35190510556566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16987962-4	37.1430787608673	0	1.34878903763725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35148224-1	2.91004752523766	0	1.64639433704161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31362079-3	11.714623444261	0	1.36277939090187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60172790-4	23.1502222411392	0	1.33627786043516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163662875-4	11.0850735010807	0	1.34207734286814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142399545-4	51.1577183965283	0	1.33408152139165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45679505-1	3.10379945252061	-0.0352041835282838	1.47537443227139	-0.0238611858510288	0.980963334664697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr9-56108354-4	47.2691808214605	0	1.33436137987728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31390008-4	73.2183108806757	0	1.34091880367866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124019452-4	19.7238920515342	0	1.34200080510038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76226221-2	5.58519753839097	0	1.37081547808685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-18014440-4	55.0684353298866	0	1.33824882808227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162565105-8	101.697992038172	-0.37384344885025	0.291544741697562	-1.28228499911709	0.199742688232811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5943850344789	5.11199176878006
Merged-chr8-126832176-3	25.9367028284386	0	1.34316545957272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173803583-1	1.45260749859245	0	2.00411820709967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10428969-2	9.23356157408221	0	1.35533824757944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93109815-1	1.92400716529359	0	1.73309262416915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118796790-4	53.1662313682185	0	1.33482945022737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180263613-4	35.5400397385053	0	1.34132292643495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19803927-4	18.6290445919232	0	1.35205445642637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39530417-2	8.59273605433484	0	1.35243493124448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88244354-2	5.16572438890277	-0.572510896171857	1.14299404797648	-0.500887031901356	0.616450629667981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	0.723581231604105
Merged-chr8-117224810-4	11.4010381530931	0	1.34277639807675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11744350-1	3.57447706107218	0	1.43280443313953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118109894-2	3.72205559637787	0	1.51060800432182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54989029-4	15.8945837389595	0	1.34448437738156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116446865-4	42.9147066654376	0	1.34003085643489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119912423-4	19.2877149356946	0	1.34052880113771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134310439-1	6.68680698167811	-2.91015051222753	1.01683222338937	-2.86197707476974	0.00421007358226836	0.109030676445224	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5786402909771	0.55634759613363
Merged-chr12-4211273-4	48.7482415354018	0	1.33857365505056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102399747-4	22.3754533232813	0	1.33864258991279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-112079146-1	2.83733020199122	0	1.43800520049851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23256835-4	34.3973297127162	-0.270289436739651	0.861840216246924	-0.313618965144939	0.753810453665785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.14143228603163
Merged-chr7-88271666-4	46.1148019271004	0	1.34253963259671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80229154-4	15.9819693817355	0	1.33832480558921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33573908-4	43.8350212929422	0	1.34220971430891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116059260-4	25.2701699962143	0	1.33681581414734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104001181-4	46.1399203260791	0	1.33845848871696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96967045-4	20.8666646518647	0	1.3407773770001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66052165-1	3.08249549680324	0	1.43014466379861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30694883-1	1.90313391196084	0	1.41832952836415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-23670811-4	23.2531632237299	0	1.33935162229012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71817662-4	21.492385369851	0	1.33885707617974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61337897-2	3.96865117583994	0	1.43087957373024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43034969-4	51.2345964984648	0	1.33579390759187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50205311-1	2.4196751753215	0	1.47540555714852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63089660-2	5.94339758221784	-1.85142078275972	1.27173353714817	-1.45582445432042	0.145441153762925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr5-95919595-4	24.8953039175529	0	1.33705560549556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125317550-4	28.1409837543301	0	1.3440436754358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73733213-4	16.7035606936721	0	1.35261472702992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-131801778-1	2.50259553085545	0	1.41499279708533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66601209-4	9.51283371571396	0	1.38246685471511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30394521-8	114.727100278371	0.421358637740085	0.191011202455148	2.20593678446177	0.0273884262138519	0.39882332187484	C57BL6J_F1_Control-BALBCJ_F1_Control	6.44600413972906	6.88797810069047
Merged-chr9-50477977-1	1.92954033456821	0	1.8232587422545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-4734306-4	29.8622974575677	0	1.34257369659903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52383929-4	30.0618932244576	0	1.33274219448759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-157483049-3	5.37299236484936	0	1.36842408781408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38938652-4	20.9176186749178	0	1.34494838251437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96645361-1	3.1628413218488	0	1.38845532329554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104972994-8	59.8216357572625	-0.170384091858963	0.250314018734794	-0.680681380612101	0.496073120338167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.17053257660809	5.97326510524959
Merged-chr3-95653839-4	35.0871945549285	0	1.3415589005049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-54119462-4	52.0116381218886	0	1.33737452471451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38352266-4	14.9307323291546	0	1.34977970575622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9127765-2	3.26090452569691	0	1.51353844003856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51138049-1	1.92994854024059	0	1.63837617571635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59726042-4	29.6188673910206	0	1.34008642855163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86897295-4	35.6343742356059	0	1.34045393655486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146185733-2	3.70552129728294	0	1.42608496508331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86532572-4	11.2581414349657	0	1.34809963821472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142537725-6	35.6601140612736	-5.12127054990947	0.76443993835788	-6.69937596524673	2.09311442256289e-11	9.32619728656525e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76658304969343	0.67591700901439
Merged-chr13-37197729-1	4.24561731990967	2.12181986145999	1.34841116179012	1.57357037792768	0.115586805966067	0.99307463023699	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.97908007631626
Merged-chr4-132167612-4	15.0768208795066	0	1.34278987561454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62329476-4	35.424206886218	0	1.33540666546621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34464642-4	14.6246735213874	0	1.33858034672403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113548137-6	51.4909968805331	0	1.34296037159576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169106389-4	31.8670731984808	0	1.34147417828834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25091367-4	25.9432682776034	0	1.33469538591577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3461648-4	17.262054633552	0	1.34284780037894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10740388-4	19.8191629449138	0	1.33787331619745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71930255-4	22.3747402423394	0	1.33858587355096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86170823-4	13.9830190227433	0	1.34318560590127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139364783-4	46.8080710455919	0	1.33773230262911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65486040-4	20.4973608528328	0	1.34753478040875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98952828-4	12.0932718284444	0	1.35356185061598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35066812-4	23.7408544648556	0	1.3524166632444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57285185-4	26.5062615515413	0	1.33993605250022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81855150-8	81.3092327036865	0.270897919403851	0.277600782400337	0.975854307979508	0.329136667701289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33024875682283	5.68465360595247
Merged-chr8-19703339-1	3.23150223157195	0	1.48744452805097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102866681-4	18.2653348188256	0	1.33917602792197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159593022-4	15.8648772742119	0	1.34878232705254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115639168-4	36.7519785118158	0	1.33649729587342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142747408-4	32.0398034273861	0	1.33864234876112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73054258-4	39.1876323150905	0	1.33649951614895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3314022-4	16.0537920666048	0	1.34171481148728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70260466-4	20.3151337000812	0	1.33828354640087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53116032-8	60.136598114952	0.224995688106942	0.248228806960497	0.906404421235235	0.364721833520966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40017256129838	5.64011403353905
Merged-chr7-31089888-2	5.83789760570282	-1.04513005734472	1.07565301624452	-0.971623787188952	0.331237744230051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0.67591700901439
Merged-chr5-64381015-9	73.1576774559458	-0.027827133942994	0.278136789439583	-0.100048375474035	0.920305920003544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.97149500221846	5.94686600591196
Merged-chr16-87689467-4	27.1428789081674	0	1.34568237388475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119925392-4	33.069194262706	0	1.34355333916624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76527749-4	24.7555620052599	0	1.33428975560813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20127730-4	23.6840557998362	0	1.34418774401368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13461752-4	26.9426949747516	0	1.33629021395834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137687870-4	15.5325278389623	0	1.3455621228929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80169836-4	26.3768974329713	-1.82073743569001	1.22838196765575	-1.4822241644956	0.138280658889116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr12-91738561-4	35.7764416950321	0	1.34115237348365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96935223-4	12.9379462868123	0	1.34322145777301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105892037-2	8.15038835141763	0	1.36682008658868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154288827-2	7.5326991941753	0	1.35431709811195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67703262-4	13.8819512143219	0	1.34211824195673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43449595-4	22.6230198609503	0	1.34206896020773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-140257884-4	19.0073509134119	0	1.34115651310522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34904283-8	72.382441674831	0.200540163006898	0.226932395244472	0.88370002348434	0.376858167657344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83657910625149	6.02679510914876
Merged-chr6-34944759-5	17.9867057681444	0	1.34107463554758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167886695-4	24.7756127315565	0	1.34538080562067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21126863-4	35.346721420359	0	1.33736255343595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117364608-1	5.16127405012338	0	1.38153443661282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88508724-8	54.0565618303423	-0.00366505323762053	0.290510545260305	-0.0126159043016375	0.989934231750891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.55522264854945	5.54763357204191
Merged-chr2-132094618-4	51.809495660127	0	1.3374355118579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58480938-4	23.9076190857606	0	1.33581730449973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3706890-4	22.2202703911604	0	1.34178548651868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54846622-4	19.3106008706972	0	1.33721475186032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101867089-4	26.5540135460322	0	1.33506910261383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7943228-2	3.39217516218458	0	1.58235974457238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62663572-4	17.3059559802581	0	1.33689847463282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29308319-2	7.57661987155578	0	1.36354529041055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11558881-4	19.0032946865138	0	1.33577185250401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73970597-4	25.8483616726419	0	1.34215579920888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32113676-4	28.1909310426768	0	1.33968131061845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11464339-4	111.778106553732	0	1.340513691819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65790291-1	2.28309677886444	0	1.48389770346421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121630825-4	40.8209152001619	0	1.3378890207415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50591036-4	36.0657086110203	0	1.337400115228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63122752-4	15.6825647544146	0	1.34037176130801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139235038-8	65.9162963565795	0.805840778993604	0.225968300646489	3.56616736368826	0.000362240083346358	0.0168587403173156	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05040037874576	6.89052107986666
Merged-chr1-161896269-4	18.1105526521747	0	1.34265634459254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25576253-2	4.53474082254531	0	1.46327277089815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137696679-4	14.3447445560746	0	1.34204298236847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19145599-4	13.6635605585754	0	1.3476991202326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75754578-2	9.01132049385251	0	1.40787200222239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137942434-4	17.0738153497022	0	1.36718035691957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28397920-2	6.75310242116019	0	1.3769383445851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58921220-4	30.7073237056258	0	1.3353664209511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126536341-4	20.484980725472	0	1.34564731240544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125581479-8	134.103715273416	-0.544763243140903	0.163107598233479	-3.33990107782169	0.000838082366861401	0.0313324067264229	C57BL6J_F1_Control-BALBCJ_F1_Control	7.63358966585233	7.09543772895681
Merged-chr16-11270846-4	13.4730911559209	0	1.3595156476724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99150988-1	2.35158873143562	0	1.67377255964645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135276885-2	5.1026697056163	0	1.41328439623168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153199269-8	67.5919595644122	-0.548782411852837	0.230975743579065	-2.37593092395429	0.0175047394258045	0.294412169074043	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9039963753069	5.35742983414651
Merged-chr4-71291952-4	51.9267535111394	0	1.34423453162768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77034897-4	13.5671288086538	0	1.34026503107823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70022384-4	21.3652689922195	0	1.33709500516956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45881584-4	48.5433188409036	0	1.33384717515896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94097893-2	4.51139061549936	0	1.39559080113454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24670805-1	5.6055141817216	-3.01089814926736	1.25124517875551	-2.40632147910612	0.016114077566259	0.279127971978732	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63749632292653	0
Merged-chr10-122615812-4	11.8986136338055	0	1.34838507484589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54936210-2	10.8034843687585	0	1.42414761882638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90244566-4	30.6264191508982	0	1.34234120746041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184622704-4	17.3630574075826	0	1.33684577442776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121571682-4	16.9852113369826	0	1.341758363103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109687464-4	22.1664708374587	0	1.34768383867847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28622704-4	18.237629348259	0	1.34072294838105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96751709-4	11.7011850694174	0	1.35104878311498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63731602-4	40.7525245321347	0	1.33407706363881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103992845-4	19.5483837027493	0	1.33759094191981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57812553-4	30.6335067507985	0	1.33588893803635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65594400-4	27.1324577227655	0	1.33725201995904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90071688-8	56.160882585331	0.0468074662037426	0.252274562830219	0.185541759258717	0.852804129679991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00318884830935	6.03441744806177
Merged-chr16-16073520-3	29.9246275624651	0	1.33565386219954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5764895-8	62.1565322287067	0.116636174357429	0.232100282436824	0.502524913510935	0.615298332107922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10404024294087	6.24927539216317
Merged-chr6-72159985-4	18.2334093576994	0	1.34239502461916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33931807-3	16.4235676813371	0	1.34882682351444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80342939-4	29.2501716239806	0	1.33736358989139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43972328-4	32.1878198578195	0	1.34603775961059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125256728-4	15.0221487539137	0	1.34071262512727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-21166435-2	9.78474351608039	0	1.36215689626429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114445485-1	1.72808854781864	0	1.51553462841953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48185438-4	34.7612631529135	0	1.33993321990619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117418111-4	29.247999456458	0	1.33326076917974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137608758-1	2.16698667741238	0	1.46076445705224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97302106-1	1.50410566057222	0	1.58476622461229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123869544-6	54.5620665450828	-6.85227651513649	0.973448987138663	-7.0391737067578	1.9338316672163e-12	1.06182985452738e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77809666161171	0
Merged-chr1-182905895-1	1.67330844796718	0	1.612219308563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92483735-4	23.5058675626135	0	1.34421613520216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54729520-4	17.2027020947579	0	1.34486133190946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67781016-7	82.274295241535	0.303765344584198	0.272234250414134	1.11582339151704	0.264497739008566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01674294693306	6.35043388042614
Merged-chr18-54847131-4	16.9190091882866	0	1.34372129296238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25465706-2	6.02396937677369	0	1.43528471197616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29731101-4	30.2443932167122	0	1.34365878420694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58718512-1	3.89605909492405	0	1.38682213421378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31134850-3	32.6610980707293	0	1.34725305501052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113101841-4	23.900860716358	0	1.34293478338692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126767549-2	4.70534555171148	0	1.48104934148193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32669564-2	6.50221858972055	0	1.48219260897584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140616871-4	56.0513823358657	0	1.34243095173876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-7281539-8	92.949355410805	0.235386753898236	0.213994869133076	1.09996447509149	0.271347600552509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14834496095192	6.37474520245816
Merged-chr19-56455565-1	4.5706411105857	0	1.4524863832701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53668559-3	5.43353158065907	0	1.44295866154162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57976074-3	15.7109518214095	0	1.34090408212526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35400598-8	78.0005184345752	0.451174182307958	0.300294882669473	1.50243713211908	0.132984252697922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.15975997007386	6.78120683838823
Merged-chr12-85192843-4	15.1555885877608	0	1.34586101000628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108683925-4	12.087734253398	0	1.3398686037011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63989437-4	24.4183077077579	0	1.33600916687764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125359727-2	7.59166535007943	1.94166569944422	0.97638266205059	1.98863189086782	0.0467418486921997	0.56401301527261	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	2.19904328031476
Merged-chr6-120466731-4	17.6468518937652	0	1.33874540939389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25519403-4	33.4709749418457	0	1.33837848711856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114453390-4	18.1700786751875	0	1.33638413984262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72396162-4	24.6968546302638	0	1.35213208620224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133056211-8	42.0982831682736	0.108503507378671	0.280454038784062	0.386885166101011	0.698841223410207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54694415900864	5.67402470760355
Merged-chr6-86585265-4	78.4856915288098	0	1.34200625522855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24628723-2	3.82645787857125	0	1.56377380715337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77551144-4	64.3522175516767	0	1.33666379392191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120137937-4	57.9033458845513	0	1.33835568380383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156678976-1	7.36993872676805	-0.629500279653579	0.661658694191274	-0.951397276541494	0.341402742339059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48366914837842	2.68483804261906
Merged-chr3-131653985-1	2.52313632605424	0	1.76081843457499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43521211-4	24.1302534149887	0	1.33501574579463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102646726-4	14.783968554546	0	1.35368759939319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95795359-4	22.0586062690639	0	1.33690081126621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67899579-4	17.3791698655641	-0.0513258585442641	1.11341549667232	-0.0460976685681693	0.963232404247862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0.577068348605183
Merged-chr16-21636354-4	21.6065730547632	0	1.33970916654879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143490154-4	15.1743649745805	0	1.34276098647498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42396583-4	41.8060185935876	0	1.33765509884071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84846843-6	36.7049055685653	0	1.33522063521481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8020075-4	24.8953774557015	0	1.3475497234371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100067593-4	19.2685771206045	0	1.33534098571877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84982831-3	24.7359150421129	0	1.34278566671588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126497751-4	35.28582527191	0	1.33513194770353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9725579-8	52.7984617114646	0	1.33288241872603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48834465-4	15.0226488761464	0	1.34366493072439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23807819-4	40.2064976525766	0	1.34298308333196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180822459-4	12.9443429715722	0	1.34060454471781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65561150-4	18.8048809483822	0	1.34105299394078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80751692-4	71.5177292704287	0	1.34285399174837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38710401-4	63.7869392382491	0	1.33872628509392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55353719-4	13.9428221677214	0	1.33951890695679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79207884-4	17.5412971257638	0	1.34024659438072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135735951-4	21.9204107300001	0	1.33825731816617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29675634-4	12.2487422819409	0	1.34647392138853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3163077-3	16.8433530206308	0	1.34937019414275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80117344-4	14.5376116293801	0	1.34583924425786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50063727-2	6.61813277587219	0	1.38825055423178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35140042-4	15.8698367796472	0	1.33922907687044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100509444-4	36.5981033074586	0	1.33854650694533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19817945-1	8.84581684187173	0	1.3514607844376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55253622-4	15.8475310159753	0	1.34431397234533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5569803-4	14.3616830740314	0	1.34853542006169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154177909-1	4.61445711205093	0	1.43044618122576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128135203-4	26.7895104844885	0	1.33769210556191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167231346-4	16.7705798483133	0	1.33984316218904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46550431-2	14.5831595903353	-0.176885295928621	0.797727625741683	-0.22173645517687	0.824519049319479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39273700449129	1.92439057437984
Merged-chr8-108723339-4	18.9692152476257	0	1.33718118325802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127662271-4	20.8933286405298	0	1.33740086366665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113433957-4	16.4444610699952	0	1.33784520594336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8677394-1	2.4949449858981	0	1.51510560156799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96530798-4	29.5803225175672	0	1.34040700531793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39718221-1	2.17020525218798	-1.92090940130025	1.41368168617255	-1.35879909889827	0.174210258954859	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr3-79239355-4	15.6401555181337	0	1.34022881064202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53888900-4	17.5537801564217	0	1.3414899509385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27650298-4	25.6445614299533	0	1.3383009345336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86479257-4	21.4462002147275	0	1.34496471453207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51615809-4	16.2711938300532	0	1.33899468482311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166430035-4	53.9110877822391	0	1.33719116481371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81754860-4	25.4191663655232	0	1.33881049605177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-18000396-5	49.367359808009	0	1.33664960172189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45379119-1	7.38123011964183	-0.919945849840868	1.16699751913682	-0.788301461447246	0.430520393029836	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.67591700901439
Merged-chrUn_JH584304-328-1	2.22435865314198	0	2.0903010651569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132169362-4	57.4967218003548	0	1.33427064618408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3136862-3	15.4058321601301	0	1.35504576449966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25109527-4	13.7357314151839	0	1.35025346523051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167759822-1	6.94056029004168	0	1.36174146654121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63132959-4	22.8704886723338	0	1.34179765500163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86282131-1	5.21911253002398	1.31972086425353	1.20961395827275	1.09102648429918	0.275261229099404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.81334941981647
Merged-chr12-102330378-2	3.95887879665202	0	1.40213649584554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86574756-2	10.4438040308858	0	1.40516486782354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74809106-1	2.00011511596564	-1.64804533104382	1.5154492796048	-1.08749619879961	0.276817577572075	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr13-99247117-1	1.96215932031642	0	1.76189348706081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96759891-3	24.3791925208385	0	1.33805449206514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177983306-4	83.6028396557549	0	1.34833704141862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77343931-8	170.284986334034	-0.0576793249385874	0.135318461540505	-0.426248748928631	0.669926598831725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.65065622396763	7.6203928642497
Merged-chr6-124745655-4	50.7301067545193	0	1.3431049315081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53412166-4	27.2350390757615	0	1.33781784656256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12408854-4	44.4993171076508	0	1.33176827033455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12087105-4	22.2065610246067	0	1.35440011987639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32501042-4	23.1629182491909	0	1.34339405927429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158130481-1	6.61802977953384	0	1.36806423671141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59659592-4	17.6362992254374	0	1.3578151028114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71300076-4	35.2197573313936	0	1.33794124676308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19968490-4	14.5459355466376	0	1.34126674958474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43474233-4	14.2084843191727	0	1.34631203358457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103946002-4	19.0927226799425	0	1.34326335680555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124709158-4	18.6837193369668	0	1.33767011601547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40569302-4	29.6024881729015	0	1.34121328891803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40641538-1	2.65521150570051	0	1.48725332184941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73024676-4	36.9754618250273	0	1.33324383407342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15987350-4	11.2225428869099	0	1.36918176660006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62167043-2	4.24796546256388	0	1.45944427703477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91870401-4	29.9040167542991	0	1.3430581404242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86292499-2	3.92160961472279	0	1.43923528245721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101776992-4	34.8699023511802	2.54490143256223	0.393825624882925	6.46200062100774	1.03327674998645e-10	3.74582313502805e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69916234073872	5.78741902272149
Merged-chr5-65091679-4	27.6056810631985	0	1.33644220881364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117242360-2	7.02336445724521	0	1.37391012672407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20104602-4	61.9764592222317	0	1.3398482370216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97340676-2	4.57729759213214	0	1.42943126353781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151285312-4	16.076526967591	0	1.34237768258852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170209393-4	21.2591479174449	0	1.33702870830144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12540826-1	3.68400720228366	0	1.4245767147431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100216172-4	18.7348669424414	0	1.347943469225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17383157-4	20.6769985658561	0	1.34000122905398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38486093-4	15.1151736362593	0	1.34120766702599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21517727-4	16.0965026667242	0	1.33977011699586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33099307-4	23.3871556466592	0	1.34034696941445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79181558-2	8.72350659929215	0	1.36552993154633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88332538-4	15.8372627940546	0	1.34209545000936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114443131-2	6.51706105308734	0	2.35620788278036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44920676-4	48.5501188154292	0	1.33473348120375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22847842-4	18.4287997716811	0	1.34860690964099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46888747-4	14.562986130621	0	1.36626522671384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114293549-4	42.2932802408481	0	1.34677732915014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191194257-4	15.2120495451271	0	1.35394760235065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25331882-4	55.930310468998	0	1.33567371033009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124708675-4	27.7138819121207	0	1.34605540157122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91216648-4	18.6524877692996	0	1.34017225486147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45907600-3	5.53260861311979	0	1.39925406697401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33903821-4	34.5018235167313	0	1.34381693236289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125333659-4	36.4396057735073	0	1.33595917947742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92861805-4	35.574756521179	0	1.33462702121883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95300485-4	39.1640005929032	0	1.34363357921151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30443462-1	2.5450881603536	0	1.44463028077471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4303321-4	13.3160855491616	0	1.3411052365015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12317586-4	36.8221830443223	0	1.34096313436398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137828874-4	36.2261112550581	0	1.33363581824658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180678811-4	16.1811345441204	0	1.33909715483108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113654308-4	45.4358812983246	0	1.34283145481936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178369465-4	13.4488963358426	0	1.34792150317982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22811649-4	16.8408855982129	0	1.34744069657635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128755543-1	3.11813642790335	-1.91299857115304	1.40306882756806	-1.36343886598125	0.17274423911409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr19-21144835-4	26.3743424114333	0	1.33698744820903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126853243-4	33.7081617120734	0	1.34308240585223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105890802-1	1.85936314229327	0	1.59327434480383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25288035-4	59.3289382986228	0	1.33340653559675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112516475-2	4.05861790248304	0	1.42547747601261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44228351-4	27.9569994091122	0	1.3353925710574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80015548-4	18.4880099465015	0	1.34170379202126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36018318-4	41.4139961244644	0	1.33924395992059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27696340-2	4.07383281223481	0	1.57093209904367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8702022-6	55.0014164911103	2.63969786376718	0.371961803764694	7.09669067374745	1.27779613730259e-12	7.71774669195907e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23921507520347	5.68714038154337
Merged-chr6-82766736-4	22.0483440958609	0	1.33625166231529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19630723-4	19.955069254707	0	1.33415083188143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72413451-4	32.4465828155298	0	1.34700615201929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43368684-4	57.2209657928223	0	1.34193285444933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5777079-4	8.64685436906655	0	1.43611454871986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19666652-4	30.589436434269	0	1.33496823515706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148857169-4	16.4256065882322	0	1.33830234821518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59534064-2	3.47402158591586	0	1.41450275076448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10416291-4	19.9798489571528	0	1.34579907812251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170184753-4	27.1913036508869	0	1.33990053891032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60390719-2	5.77501465112776	0	1.4280550175312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92274675-4	23.6631718663062	0	1.33490465154827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85380687-4	30.445921902119	0	1.33532057100636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25139058-1	4.67801702574496	0.00767648200989482	1.09674651704102	0.00699932198609183	0.994415394650022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56041795642383	1.88379365778088
Merged-chr12-85710818-4	74.3510544152469	0	1.33812462488687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4826374-2	5.14509295697991	0	1.52119025767581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116189904-2	11.7479213409008	0	1.3466946047365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57923071-4	17.4593436214186	0	1.33992628773188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17314686-8	53.291795495714	0.211053579383556	0.282534470204231	0.747001168498116	0.455062855496089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89392138798421	6.12201263930013
Merged-chr1-144243705-4	20.352564057037	0	1.33568154895288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-58406088-4	21.7937297873813	0	1.33840757359925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135298765-2	5.63359703342748	0	1.41677154453418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73765467-4	13.2535454875543	0	1.34384829262831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19320132-4	67.7152200919626	0	1.34024977480219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82764349-8	182.325574286811	0.153734288391401	0.165167588223325	0.930777582000741	0.351968628359987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.82053768011981	7.97752096709674
Merged-chr17-43201054-4	15.0850501631776	0	1.35087958547428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5080231-1	2.28972924392258	0	1.57826323862607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96709225-4	8.0027473461604	0	1.34902678280532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57375489-2	3.24855909081044	0	1.52115230576944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56938950-4	23.5670970289706	0	1.34103537783705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120876113-1	2.92633744302952	0	1.4007041322528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128433726-2	5.93691398605351	0	1.45532087337794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80331716-3	15.3943598652942	0	1.34420646367706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60257953-2	10.4749457559743	0	1.3488639548747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144198715-4	15.5333884509948	0	1.3479354511663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135708022-8	60.134579255279	-0.0857008157286577	0.212966368710645	-0.40241478618203	0.687378789919631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.1124208013682	6.03193845304495
Merged-chr15-79768492-4	11.9360298645118	0	1.34726459632802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21126419-1	3.35317232967695	0	1.40553837924487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116004913-4	15.2424543712963	0	1.34567822252283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65353811-1	3.13631128706759	0	1.39512953862474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25654116-2	3.73168433412894	0	1.56368745363869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22119103-4	50.5824083936541	0	1.33363985689519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166627748-4	21.3618114988758	0	1.33962519463471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98912806-4	13.9758090503915	0	1.3528767026944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56097947-7	25.278376498868	0	1.34205442260484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98564835-1	2.6089727001487	1.2829845918488	1.50508403022974	0.85243386155188	0.393973332851788	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr13-117242235-4	18.7388455087098	0	1.33693607692702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148492355-4	32.355182361071	0	1.34361057029779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4294585-4	42.8769368956499	0	1.33398559232255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51916762-4	28.0108412261379	0	1.33791958940746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69378543-1	1.03483427747101	0	1.83686348412656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101169984-1	2.55279361327046	0	1.50771158486145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54971479-4	35.0974344441426	0	1.34546502719304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80325380-4	24.9419442496114	0	1.34294578246003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99214695-4	64.9542967798379	0	1.33712314648539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128096808-4	17.8891082382886	0	1.33862994092449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14174318-4	33.1996869455984	0	1.33807754206073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-6413-1	4.58390818953409	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63938807-4	13.5791851628483	0	1.3516011477495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79527096-8	45.5086012797947	0.400909407399069	0.273629421348337	1.46515460736476	0.142878740897005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13517193128404	5.51470477984391
Merged-chr18-64921030-4	12.7590431952531	0	1.3477611495978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92864355-4	52.4953169824394	0	1.34006287451112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13552242-2	3.42211209484559	0	1.52862122773346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33934902-2	7.67945253361649	0	1.3750052129591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90244955-1	9.25827947263139	0	1.35384818021157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110497601-2	3.76627861694879	0	1.47226652067258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85713671-4	40.5120069507915	0	1.3369135765547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3873064-4	27.5230993222422	0	1.33668094951866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151195513-4	14.7297466334055	0	1.35422530101683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11598452-4	14.4501534217982	0	1.34333649535222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50691013-4	16.1463008624632	0	1.3467962099024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30929892-4	16.8141105767904	0	1.36728294469669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92241626-4	30.1856604311536	0	1.33405819697742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15841715-4	22.3867300598332	0	1.33754281862077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120158277-4	18.2534281325287	0	1.33768876892071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17398846-4	36.4844117647753	0	1.33494180585838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-39430307-2	4.8042909011432	0	1.4496181577968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44582640-2	3.37638621529863	0	1.56028523534233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36023811-4	12.8055572269493	0	1.34432874298884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-51921303-4	42.1046020562178	0	1.33190872646785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31068959-4	15.0580684553512	0	1.3401107729667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64344478-8	126.937478935127	0.739224448119033	0.180028479563886	4.10615281487565	4.02303386306879e-05	0.00276820376914628	C57BL6J_F1_Control-BALBCJ_F1_Control	6.43783395738345	7.21015471687086
Merged-chr19-5810442-4	44.0853829605045	0	1.33303126761904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6562589-4	32.582955481279	0	1.33667314293104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15080625-2	3.3582480774621	-1.2303589771844	1.50422745461825	-0.817934131840885	0.413394799485485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr3-100993842-4	13.3375167923399	0	1.34848368334093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53139453-3	11.519469008363	0	1.34299659682063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3104932-1	4.64466479037343	0	1.42867846580022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36469049-4	31.9346033678718	0	1.33905526056651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63031827-2	5.02579135770711	0	1.42270146075219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95688352-4	19.0723396415524	0	1.33966661895723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53344091-4	19.6567409868943	0	1.34438056129543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39076693-4	19.5252027983452	0	1.33613540103838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95864229-1	1.76825452424563	-0.0234635985915642	2.40493369594831	-0.00975644302838548	0.992215608236509	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.413263464506793
Merged-chr2-167983256-1	3.12636418821251	0	1.4846008790439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121741710-4	27.0334166049554	0	1.34731751780106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19301983-3	10.2788593513805	0	1.6454849226159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26693938-4	18.5361043583765	0	1.34805075522412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149375268-5	27.8696726109744	0	1.33636942432436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106624562-2	20.9419082977093	-0.293841337039632	0.637500585094927	-0.460927164476057	0.644850861835114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48990049581018	2.81084956880078
Merged-chr5-125329383-4	23.7253105017295	0	1.3410267631403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142590915-2	10.2542946125894	0	1.34304464827702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111798153-4	20.1072018332636	0	1.34060370870608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35748463-4	14.8706815537116	0	1.3449491609333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38086915-1	5.05737135832845	1.45737367575761	0.96940492142045	1.5033693800751	0.132743818025364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	2.82791325953938
Merged-chr13-52042025-4	19.9828106180969	0	1.33697501917441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111180184-4	15.4295597325315	0	1.35815344468441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119090352-2	4.0318832964174	0	1.8796181344378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87170592-4	20.2211652084507	0	1.34598568376794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-39660-1	4.29834834985942	0	1.61656782867545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8708133-2	2.49149726262191	0	1.69577004225209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94052157-2	5.32998463815792	0	1.49652216434792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95347059-4	10.4497216373101	0	1.34268890207904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36727706-1	4.2547036261927	0	1.38592027468209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8985043-4	16.4991138658132	0	1.34353677743847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102725284-1	2.15917223407544	0	1.54340390142496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88415273-4	17.0874464183372	0	1.3417605356962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97439145-4	20.0077072989964	0	1.3370605867226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64301959-1	8.85842981031048	0	1.35742318531559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25407365-4	20.9052794225667	0	1.34673252665435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23894444-4	36.2119267698203	0	1.33530386596477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102979785-2	3.79259167448343	0	1.45716661034772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122920160-4	33.9988316106758	0	1.33445334395294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47767277-4	19.0812364924228	-0.787413123400386	0.913929514428574	-0.861568765390741	0.388924865202214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	0.953310774576147
Merged-chr12-85424058-4	14.2726308631135	0	1.36409273070284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83592289-2	4.50393942853348	0	1.38642478630674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57640653-4	19.6981236838875	0	1.35026800808636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-130997900-1	3.49678780231821	0	1.92726108325203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40921494-4	41.4461840182555	0	1.33457519886266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172347588-4	15.0634725159613	0	1.33720217211797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74937076-4	16.5356818018127	0	1.33985023181237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80160003-4	88.5965173714184	0	1.33868296530488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77286792-1	3.384595464442	0	1.46931056308171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89043081-2	6.8410160715263	0	1.40409980800443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30719106-4	14.4708835347693	0	1.33817019124376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-151951380-2	3.78914181258456	0	1.45501288788819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107261060-4	13.6559795801717	0	1.34090351012434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30582763-4	17.5483937371735	0	1.345560903787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45903488-2	4.33558841266377	0	1.42632979373428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80763684-2	10.4773863194686	0	1.41202113643855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84275508-4	29.9241033618969	0	1.33962602520632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101182771-4	23.2697404075846	0	1.34208729045851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7332068-4	23.0643200091746	0	1.34102674481913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27547405-4	20.1331168450856	0	1.35024418366843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64360651-4	9.92408131458552	0	1.36846174169964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68119479-1	1.97428459666552	0	1.5014115529581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31145686-4	22.3288285517564	0	1.34079154349853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97555441-4	12.5318873060718	0	1.34654849128197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115428204-4	29.104674443062	0	1.33501685911665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86663719-4	14.9593967191812	0	1.34719748541605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124705254-4	22.3857845998147	0	1.34028469362122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25354933-4	51.004864474314	0	1.33871503372666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37106391-4	17.0677611782467	0	1.34890014637912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69079064-4	30.2091292028726	0	1.341550882221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3706749-4	18.071856475022	-1.21861821300365	0.710388363282175	-1.71542535884642	0.086267269370854	0.829395559909843	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8791003123656	1.39949824061849
Merged-chr17-65717667-4	46.6944935206281	0	1.33862650058875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-26792045-2	5.10747568757915	0	1.40304713135392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49198968-4	48.2195012466097	0	1.33434452055527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101198513-4	8.35894475042986	0	1.369405216222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43077208-4	21.7105769230626	-0.151764055910838	0.425327881421392	-0.356816617343923	0.721229095238692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43155652185179	3.5571373108782
Merged-chr11-103382099-4	32.0130138537412	0	1.33714201114349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88200358-2	6.7422017731219	0	1.44141474292181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44957417-4	21.8586595315975	0	1.34804829686746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124272368-1	2.10581392561466	0	1.53869857068476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94471665-4	39.7111354696802	0	1.34012398878049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64199019-4	14.817380170447	0	1.34116921405659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71327295-4	42.8192862754796	0	1.33405416500002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79224687-4	12.5241620814046	0	1.34559326859122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26799782-4	69.7078342358958	0	1.33994564702102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28537138-1	3.84028128108368	0	1.43186658619058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38143711-4	15.7055763507582	0	1.34729005300908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85257466-4	43.6121058405366	0	1.33617810980552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83641343-2	3.6148199089263	0	1.54513197177095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16312861-4	18.2591654909279	0	1.34566524053427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79138117-8	69.163348289537	-0.338080570621794	0.21222091703904	-1.5930596066532	0.111146819836357	0.970526749964851	C57BL6J_F1_Control-BALBCJ_F1_Control	6.45102786450192	6.14177945041899
Merged-chr8-105393380-4	28.1101566887827	0	1.34290762975173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60855225-4	48.0223209977729	0	1.33724885125752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101145628-8	80.5059883844168	0.184652117150703	0.228012144754406	0.80983456977519	0.418035261115741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98264139318832	6.34037792049387
Merged-chr9-37247631-4	26.7175173855698	0	1.3380407339085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4202602-4	12.2064778369167	0	1.34331215694834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74881003-2	3.87355007281601	0	1.69875965093991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5613815-4	26.5678196186009	0	1.35194831859329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14668090-1	2.44571478761196	0	1.48125904690584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99151532-4	17.6849103237195	0	1.34191286228377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43668099-4	37.3374175583989	0	1.3323168125648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122894764-4	22.4741970546193	0	1.35005701107338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80603273-2	5.51959988011431	0	1.44668800292315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76341896-4	24.3110472298591	0	1.340166528505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55986733-4	21.9096660184117	0	1.33903596961929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29641216-4	30.0803486895468	0	1.34129391382954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36639923-4	36.9543566096016	0	1.3338896791795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143829599-4	17.8646428718598	0	1.3377052787681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107886921-1	2.2884891735965	0	1.49334252157284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107960935-4	25.7631698576075	0	1.33573209920149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88550364-4	27.8343698695413	0	1.34100507036626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164455074-4	46.0035827360943	0	1.34346343131783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158166792-4	36.4298822879705	0	1.33487218281305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53564418-4	32.5933656151102	0	1.34901335342184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126482626-4	46.8572466460933	0	1.33741623771163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97880669-4	25.4109146327725	0	1.33967122919015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54798618-4	16.5915628974663	0	1.33592861046558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144215470-4	15.2180614558818	0	1.34446300098338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24306799-4	23.2743924449406	0	1.3483248663229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66954350-4	28.6857256574021	0	1.34378980758753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106369541-4	15.7450485921188	0	1.35913896412395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68787378-2	4.35013514356595	0	1.45274681195124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58323302-4	17.1028119723751	0	1.34629665032783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103396824-1	2.74954705296699	0	1.43633231935603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-107004204-2	4.43073110837902	0	1.42279148609218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135702802-4	35.5278308528214	0	1.3385387027184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125450343-1	3.14467712003002	0	1.50127709615886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40954908-4	26.2016890744976	0	1.33535406300441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51678949-4	13.2972891692547	0	1.34716067562167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58353206-1	2.90539146555996	0	1.52110365408126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84774822-4	30.983468341788	0	1.33867369752808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9631814-4	34.9855879953008	0	1.33455824029841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16313039-6	54.1838530954171	0	1.3362394756535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90014843-4	11.0610005489511	0	1.35378317483404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78668926-2	2.50659851631459	0	1.58265350696132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99479445-4	17.8100806530167	0	1.34393200145246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167698058-4	40.0452234330218	0	1.33720415369642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7734147-1	2.33837352495378	0	1.47030417584045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-59198978-2	4.11151073037228	0	1.39681466897257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135753147-4	21.6378556786625	0	1.34166864295558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125116714-4	43.7723053865756	0	1.33548599957354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144301690-4	8.66377363242359	0	1.37141993318377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19351993-4	29.6984284080407	0	1.33556937568504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25550852-4	28.7994983454198	0	1.34082754708057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123696406-2	7.67715450798432	-0.450561084884948	0.759502371724697	-0.593231965637978	0.553025922764149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27475795090983	2.5146548607472
Merged-chr10-66930864-4	27.374715092818	0	1.33974768808106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38187165-1	2.06371216432519	0	1.60211144479755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149170787-4	13.40776815428	0	1.34287272872387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50779843-4	14.415587797444	0	1.33949536400829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96548087-4	22.5370755530882	0	1.33743222169648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75142759-1	2.96976840770259	0	1.44100607626164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24629436-4	40.7845681670949	0	1.34453908467419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144245686-4	27.5352022663606	0	1.33591517286494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83267698-4	46.0568193180516	0	1.33812065823137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4723033-4	17.4096339701591	0	1.34094260107385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13595004-4	37.5389921948102	0	1.33734665773956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125555623-8	114.400253970052	0.555452305730059	0.184589300788552	3.00912514082457	0.00262001174360543	0.0764472455022262	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64947215254084	7.26773460991258
Merged-chr10-30751786-4	25.8004374958739	0	1.33754519032147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124682430-3	7.98507993403796	0	1.36961012304354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92439949-2	9.27685173416311	0	1.38841453756974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-93068036-1	1.18680806847177	0	1.74551341299967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80335876-1	2.29533891810574	0	1.59170939876647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80758850-2	7.17226711154936	0	1.40461690444798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100461782-4	31.4130545641668	0	1.33696426873121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103979618-4	25.0548078583017	0	1.33878402132577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80061310-2	6.30854097979745	0	1.40338421497245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125405122-4	15.0162946016245	0	1.342853709446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-41258695-1	2.2968412686676	-2.81124752132305	2.07820858432621	-1.35272635409429	0.176143067876191	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	0
Merged-chr2-48689265-4	11.5942717340404	0	1.34385229345884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78298297-4	17.2619296434108	0	1.3497285593865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-20898890-4	10.6611842180513	0	1.34515533340998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126599150-2	8.61116833073247	0	1.64345532772457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-39268932-2	19.6846613958347	0	1.34437631557393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34646478-4	11.5179429800764	0	1.3462123343608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55812742-1	1.53431829050921	0	1.82520910324608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63899767-1	3.34806906340014	0	1.41778176729998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19496376-4	24.0182982707022	0	1.33422736749511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56756307-4	18.8752240148139	0	1.33881067515215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152531933-4	22.7594420220563	0	1.33966998751392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116627995-4	45.1925247079235	0	1.33815384022759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90574403-4	48.6845724658642	0	1.33833966647126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53267818-4	41.1923847727125	0	1.3418064713492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-67557411-4	75.3944877067213	0	1.33606875879652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36808004-4	52.0437047950383	0	1.33548943938825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40317356-1	4.46312860361272	0	1.41549924297348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77442829-3	34.8936783721766	0	1.34115696707147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6193214-1	2.08361602975905	0	1.53277013129858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51376804-3	21.5653079969431	0	1.33836459653305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88264872-4	24.6863044183574	0	1.33808930241121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55161518-4	11.0504068077588	0	1.35412688155894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126908946-4	30.6823857029122	0	1.3363516326604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122946942-4	25.8047339736259	0	1.33588556906701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150061032-8	161.448776367995	-1.19789855171372	0.223524668054395	-5.35913356740659	8.36220166189864e-08	1.48065446299397e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	8.03036527619699	6.81558408229949
Merged-chr19-11329666-4	19.0735201357712	0	1.36127588508722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15583264-1	3.30138961361298	0	1.42561156605494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101752578-1	2.75312940278094	0	1.52142611638073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100005460-4	20.6887724894795	0	1.33610214569631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79549654-4	16.6617115684346	0	1.33832772916327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57796058-4	21.6804379424629	0	1.34130711009929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132282226-4	13.9628277385731	0	1.35031919359076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46063252-2	13.2813461809196	0	1.36145591801626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105369036-4	10.9734129910934	0	1.35116381477426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47315633-4	48.3484290039052	0	1.34414504740029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110941828-4	36.0066126900704	0	1.33555656397133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35680459-3	12.1588068698289	0	1.36748944987824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102701677-4	40.5121872402239	0	1.34227104297775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46140519-4	24.3623393484439	0	1.33676620052662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94428131-1	3.14608628150621	0	1.4087834336644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89415986-4	15.6303488531452	0	1.34384696569622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3177337-4	26.0765241849511	0	1.34398285244525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100875879-4	10.753793322668	0	1.34982280612059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40097657-4	22.7938137871222	0	1.34024153602053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24629041-4	35.531650058036	0	1.33316181986132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60870643-2	3.7928076701746	0	1.47272643373575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106317137-4	18.7815678245485	0	1.3377076036172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32215056-4	28.1329532894207	0	1.33813686549059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51209987-4	40.7779345217225	0	1.33614100124026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66186780-4	17.5330954771871	0	1.34880226903971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99146013-1	3.41114846456189	0	1.40651004007902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94779342-4	20.3530071689536	0	1.34520719190485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10321294-4	37.7640126683569	0	1.33748934484214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32184736-4	43.1198005861966	0	1.33503631851631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112581280-4	40.3323878765926	0	1.3341936598595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132102864-4	24.8569089508175	0	1.34340344674809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167247213-4	15.5339466304252	0	1.34015631361358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51921576-4	30.1346768390291	0	1.3373872222941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79060550-4	20.8570081954914	0	1.3446536307909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94544109-4	15.5220524393438	0	1.34812902320742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22761441-2	5.78842368991872	0	1.47273275729933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114885246-2	4.3726911654774	0	1.37962064172284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96654931-4	20.6360375800446	0	1.34521007898597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118632542-4	12.2554123202255	0	1.34155385036021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73875177-4	37.858628653413	0	1.33815547419673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69586052-4	28.9533845582431	0	1.34338299689704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40022934-2	3.99383394212956	0	1.44190240375926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82470253-4	9.96191613415915	0	1.35620697433907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21596632-4	14.8657530341122	0	1.33897419157304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83480990-2	3.03829477642353	0	1.94513657888733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104361941-2	6.9967632567499	0	1.36785450255019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23911518-1	3.47981674663084	0	1.43926480803845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130873958-4	39.701326229621	0	1.33331057124059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116018064-1	2.48710608954036	0	1.51409405815875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63846021-2	3.53989461433261	0	1.4816590222256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47511233-4	41.9454522003153	0	1.34117612223959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128016321-4	43.3495739021475	0	1.3375062403958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48766740-4	31.6420694393963	0	1.3380522807545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21619478-1	3.10745103925904	0	1.45312769202612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20648565-4	48.3259877549268	0	1.33416419771005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119028415-2	2.47129257347807	0	1.58221616035687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89449009-4	17.834767934648	0	1.34059749813642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127587895-4	26.1631854800679	0	1.33604604610388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64858944-2	4.54041617340476	0	1.4304179932555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88108232-4	32.895679853589	0	1.33463970981467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57232529-4	31.8420132393223	0	1.33580003475741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52476391-4	26.0959164029926	0	1.34264378505623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-27178444-2	2.72690633299111	0	1.45771542317332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61911491-2	4.56077241588975	0	1.42270554150123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47275843-4	25.4254411004205	0	1.33689426481062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52897243-4	32.8600671579846	0	1.3378276609055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21636028-2	4.92345681883375	0	1.3993377113883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74658983-2	5.84932445258347	0	1.48338478125666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143830167-4	46.9822277186139	0	1.33594845048849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6247841-2	3.38972740903963	0	1.41207741722496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133443678-4	28.3317836218427	0	1.34325970044625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107087587-4	32.7839595895953	0	1.3347933960518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127355426-8	132.054020586032	0.945180354651404	0.176226418029891	5.36344303662285	8.16504089419991e-08	1.46023495988137e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.89531423903096	7.85409627903707
Merged-chr1-7395673-4	33.1466732771246	0	1.33993196931406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25268578-4	23.9382982110857	0	1.34506521164508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140735474-4	48.6512364358803	0	1.33542108442719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34869701-4	48.0473730713186	0	1.33485490354616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3349574-4	15.0679330945542	0	1.34726309424044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45197567-4	28.5093588385711	0	1.34829241160758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96690493-4	16.5742750999189	0	1.35283346295179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66454155-4	13.5358808305155	0	1.34075167049586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170316562-2	4.94072993100593	0	1.5030547822826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-21532252-4	22.625188843281	0	1.33826645317018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79509133-4	15.4098051162327	0	1.33995466767268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54223438-4	16.1254617073805	0	1.33884482002848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166786799-4	11.8656658117157	0	1.34716295253562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146658473-4	12.9112453840673	0	1.35094531738388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152791142-2	2.99869494077848	0	1.52364769342461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75782190-4	31.802771257257	0	1.33954174634639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119470997-4	11.5647190963587	0	1.34809557574697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34839435-4	21.138951884962	0	1.33745406544478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8003262-1	2.77094617080239	0	1.43921581000464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95835423-4	28.0829345213375	0	1.33844572106248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12867026-4	36.566490478697	0	1.34198886146713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169730827-1	2.18276016997446	0	1.61514988361379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34643351-4	45.0884708994678	0	1.33318612095315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77314930-4	39.3340677582511	0	1.3374584667421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134920363-4	35.5574007995459	0	1.33745461407463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125725554-4	27.8280109338107	0	1.33901995619802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11524902-2	9.74814613872187	0	1.46537890146765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102748321-4	36.4757094635938	0	1.33199764393017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32558264-4	18.8498591320392	0	1.371560080804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84650833-1	2.26333465327923	0	1.67978738322788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128780384-4	40.4088510170814	0	1.33535171609413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3740323-5	18.8062904402847	0	1.3431213206079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100614288-8	119.019217755967	-0.173148846127843	0.217879428809703	-0.794700293982654	0.426787861313371	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.05128011459325	6.90342416712491
Merged-chr17-81630640-2	9.00813537726344	0	1.44224508739536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34347792-8	121.332665237659	0.0183421748283449	0.20160736251548	0.0909796874453753	0.927508731179531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.34819117362152	7.35592619485181
Merged-chr4-129068249-4	31.6238063972921	0	1.35715439681971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128065774-4	13.3344709330278	0	1.34878529114985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121929500-8	68.1517461627377	-0.867725761633256	0.207134844332064	-4.18918296644566	2.79960609368034e-05	0.00204548101675228	C57BL6J_F1_Control-BALBCJ_F1_Control	7.15789629417199	6.27073786959573
Merged-chr11-100363358-1	6.11792482238158	1.01656027690193	0.72523316350794	1.40170131214745	0.161004458652121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04937768295532	3.42860125366299
Merged-chr8-10845972-1	3.34084592835871	0	1.40902817046257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31742367-4	12.0819670341525	0	1.34867251343756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116476507-4	21.7912504471198	0	1.33988681102263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46985883-4	10.6047669931381	0	1.34979483010375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142443675-4	36.4411018400484	0	1.34264796956233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76472610-2	4.46552461368384	0	1.65110993710663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43353226-4	35.1056285043115	0	1.34361899515018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57094867-2	9.22299322399048	0	1.41631238711583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67158937-4	32.4032538757865	0	1.33671374645846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91585682-1	1.61730530309252	0	1.58021398587593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79088206-3	20.8556890332318	0	1.34126140640385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22868239-2	9.21262193339485	2.24804072897905	0.748731597678962	3.00246541744451	0.00267802398771949	0.0776812731848685	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1935786047746	4.6451301208272
Merged-chr19-41339314-4	68.0056899927553	0	1.3335007033018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51533583-4	15.5679295945815	0	1.34912752351317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145806464-3	23.8084346583483	0	1.33967238396085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146617199-2	20.0650605786675	-2.2662703365264	0.635969943009213	-3.563486547498	0.000365961457950898	0.0170028195664554	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24415207139758	2.12382511851675
Merged-chr18-38443744-1	2.96686256994352	0	1.41775762566879	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-54924970-1	2.2008680147176	0	2.11597471395382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85553275-4	29.5154961530454	0.209845890296489	0.540840560464277	0.387999543000897	0.698016371796624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92891808839758	3.00544798312468
Merged-chr5-99374661-4	18.7921502669522	0	1.33678256281108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123564168-4	27.3731548315875	0	1.34549759264986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13538400-4	35.4548002713948	0	1.33893910331835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62623402-4	26.9128620238994	0	1.33857785818786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102959524-2	6.81170955382613	0	1.67027225767212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74684131-8	144.007893686808	0.47181178193576	0.169682913581519	2.7805497440913	0.0054266944999088	0.131106527253574	C57BL6J_F1_Control-BALBCJ_F1_Control	7.38428149204722	7.85552090993054
Merged-chr16-91880668-4	21.9887037237288	0	1.34363393243957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23052727-4	28.5923347074179	0	1.33865497619341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79678816-2	7.33724301006598	0	1.43323192529883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166021273-4	22.586097372273	0	1.33732560785817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59089932-4	19.6762096416919	0	1.33597601055699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7221665-4	53.3034161960598	0	1.33560785418479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70372620-4	16.8562274483953	0	1.34359109541785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153803745-4	27.1720101058312	0	1.33986330548068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115192833-1	6.6874822763509	1.30479366455178	0.71445048584782	1.82628984149044	0.0678066145952243	0.71887353599947	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57151361581017	3.95233236506786
Merged-chr15-27596950-4	15.4897308310608	0	1.33701391212434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85525187-4	50.7726119267761	0	1.33934859276031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74368442-4	50.4543752191048	0	1.33592747698191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86570447-4	18.5271075481967	0	1.34143771713265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119492127-1	3.36079227336506	0	1.43034972318564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75276719-4	29.4652229697979	0	1.3358222046694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91562200-4	17.9425946341187	0	1.34408248207336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94605659-4	16.4285655185335	0	1.34211409466902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57280407-4	16.3376830652849	0	1.34808946949445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140844239-4	21.1055515659749	0	1.34582100466799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88315089-1	6.75826684468798	-0.362814162147004	0.679655987529768	-0.533820298509638	0.593465868593171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56690622832005	3.24010311111749
Merged-chr9-108259992-1	2.30345135539344	0	1.40973473217762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135479377-4	35.9783355010277	0	1.34266163193227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22815393-4	12.1223468907503	0	1.34200126773563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115689616-10	105.449544743891	0.193726373897066	0.172939354620438	1.12019831646909	0.262629261229071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.73456134790601	6.95265223638471
Merged-chr6-99490044-4	27.6307606654994	0	1.33328807717684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-61680575-4	31.3686716751289	0	1.33374698868078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122811058-4	80.1835802583675	0	1.34012664800977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88112440-4	55.1955658731169	0	1.34743337580901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70054328-4	40.2181631016089	0	1.33481544438867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93798810-4	26.8519291149602	0	1.33827893490077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117412238-4	19.0533824432634	0	1.33634807243651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-7738057-4	31.0338059426784	0	1.34823994231574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74987222-1	2.84491139835827	0	1.4649158860907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125252442-4	25.9922625781628	0	1.3415255132255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-114473795-4	17.7063591808942	0	1.34277109741828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80789263-4	14.7327237784187	0	1.34421460712716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-123266039-4	24.085502899433	0	1.34709153317474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21453207-4	18.6237662764852	0	1.34297811763637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108641203-4	20.2376423836747	0	1.34110893863192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85988524-4	22.9104565813363	0	1.34013744259052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50415842-4	17.755147606344	0	1.34263714753244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45185402-4	9.60807585715873	0	1.34895166985206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31771358-4	30.3926094473008	0	1.33348127953691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80949235-4	34.0305982858162	0	1.33706159767293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21235501-4	17.0699838853638	0	1.34090808935189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59071604-4	18.8999090447987	0	1.33913044140838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142611331-4	37.6757975816555	0	1.34181718029102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168540042-4	21.3498466692542	0	1.33959047843429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79696683-4	30.5102919120376	0	1.34099378399408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82785365-4	14.7972216822607	0	1.34285585616892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128393660-4	18.6912303936244	0	1.33767004473731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19094507-4	33.2053647570378	0	1.33551619936149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39718660-2	5.22824171597919	0	1.40920160395986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94370951-8	84.7525960086979	-0.151365529121178	0.207147916177661	-0.730712294452233	0.464954904398586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.71419036734526	6.58284871680698
Merged-chr4-107364309-4	14.9094062380434	0	1.34669299989288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46830536-4	13.2626391799646	-3.60845050041195	1.06874966803938	-3.37632900231131	0.000734600192013709	0.028439059191233	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11197723984608	0
Merged-chr5-25663344-4	11.1061260167213	0	1.3461033436386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21564124-3	32.0397598132958	0	1.33452244177172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26963562-3	52.4317712404919	0	1.33810286199896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65681093-4	15.1528759811858	0	1.34055881493993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69634754-1	3.04129194021484	0	1.57935023893911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71136828-4	11.7011901268013	0	1.34207656703884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139024659-4	38.4023955649059	0	1.34101343148771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38364854-2	6.54443569083317	0	1.38464121286132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68825572-4	16.1423793704504	0	1.33735093817954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59864877-4	44.6004342345646	0	1.33464640621883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70024886-4	35.4660042430982	0	1.33998536170467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117288382-4	22.5244888265761	0	1.34096954482654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-114380185-1	7.75219799614309	1.64969848665489	0.771549553588831	2.13816271292153	0.0325035394943769	0.44606410082677	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40949193645596	4.20703479617644
Merged-chr2-124576234-3	19.0399625719859	0	1.33637531147594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113869407-4	15.9232491887808	0	1.33959803518462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35705037-1	2.57356375746055	0	1.51956267621053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80079052-4	44.0851341093859	-0.698444662894617	1.33735620502117	-0.522257765187969	0.601490871290898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr17-13145085-2	6.83725825789451	0	1.41206942143592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82016613-4	31.1658214252196	0	1.35104620789259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126941308-4	14.6861264952745	0	1.34424291994989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39003716-1	3.68659298833759	0	1.39423058449249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-11029-1	1.85781253945208	0	2.15893084713323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59240177-4	56.7922915588797	0	1.33801074681472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121580794-1	5.64956125927658	-1.1728868605502	0.918441062692157	-1.27704096451459	0.201587785266179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16596752412581	1.14143228603163
Merged-chr4-9116025-4	30.8666989926839	0	1.33584262878583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157840760-4	23.8133816254142	0	1.33778759023204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21590974-4	25.1827530147786	0	1.33807979715379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104074878-2	5.5005203461548	0	1.43795074640188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21595905-4	28.7151547635484	0	1.33628373995827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127561276-4	17.7323026903217	0	1.34151318198779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91034745-4	24.7979523264737	0	1.33983366837376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132008845-2	5.3512559592329	0	1.36868683165779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4315317-4	18.9985124742112	0	1.34967203610843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-39848132-8	270.315643117034	0	1.36658977292025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5110584-4	13.5497173755059	0	1.34718880834147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-131855156-4	33.1456843439786	0	1.3527715570135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83824554-2	3.77644843501676	0	1.5422482060067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-137421504-1	2.48395532704183	0	1.44688563979833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54952728-4	14.2400536630407	0	1.34408988641272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-178498130-1	1.88222618976661	0	1.5207922781043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125286413-8	156.103593899206	0.0812516536746835	0.17711810984509	0.458742777606126	0.646418891076701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.35820845378483	7.38421186460876
Merged-chr13-74245690-4	31.0381336835605	0	1.34659536089124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73755914-1	2.94138126383555	0	1.48486669027467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58763296-1	3.16435650259212	0	2.30968551144109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3139152-1	4.64953360495071	0	1.44676923604593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38403818-4	25.4124137155725	0	1.33924609871485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90677440-4	33.6395274865022	0	1.33388090220961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59427405-4	13.8820901723281	0	1.35080792878956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80963373-2	5.83107673905949	0	1.44495059950234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3344387-4	50.2060311330037	0	1.33715454809118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-56729319-4	15.0723864796724	0	1.355357412422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118962245-1	2.34790223948919	0	1.55356815351507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79154190-1	8.3109327515548	-1.55262502758058	0.663318593979489	-2.34069275559701	0.0192479997153675	0.312049512832586	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49563079346334	1.76271631669283
Merged-chr13-52652008-2	4.16720242677223	0	1.40321620948174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121591266-4	23.5249839130031	2.22655176389239	1.09370741528099	2.03578373227026	0.0417720766700307	0.522838663528943	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.78034001852877
Merged-chr2-6086022-4	20.6234592728911	0	1.33899846676716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42073473-4	25.0022973881306	0	1.33582137607798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15463596-4	15.1361780730583	0	1.34919345231427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56592855-4	16.9976558088415	0	1.33833709189539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73779982-3	19.0062723452508	0	1.33889483749158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30922801-4	16.1702645725817	0	1.3418844352885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40379699-4	12.5579414613141	0	1.3461500557981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29628731-1	4.82290609756486	1.51777395156949	1.15256391214724	1.31686749478548	0.187883043833676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	2.64849829903454
Merged-chr9-78527521-4	58.3913535468125	0	1.34048431698814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-152362423-1	3.04201892335676	0	1.43005710416558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150782557-4	22.9498333409581	0	1.34347260977332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24752168-4	20.4076337148576	0	1.33690525074035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141953022-4	31.9455861391271	0	1.33989881966415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126905837-6	60.4642429438409	0	1.33362337514537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142074316-4	17.9184557201911	0	1.34321015625781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71011141-1	8.77061402626128	-0.349214665786419	0.705906910851255	-0.49470356560938	0.620809384258444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51897623717264	3.58692907006487
Merged-chr17-88435498-4	12.9498832620756	-0.0103338949915778	1.10168000802666	-0.00938012391646104	0.992515853699719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.724326877898254
Merged-chr1-39525955-4	22.9339175928715	0	1.33598336697398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44970318-4	33.7355577235199	2.10696308534859	1.17298711633332	1.79623719306893	0.0724568018719288	0.74794517526703	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02748994520012
Merged-chr17-57334967-4	11.1258364580455	0	1.34576343255408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6412550-2	3.42107939152036	0	1.47021994953032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110606339-4	12.6634094145873	0	1.34179354715456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-98667161-4	138.937574826159	0	1.42718791159723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77565990-4	20.2756768176284	0	1.34754181481563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133841211-1	6.81453336190081	-0.290540031920927	0.620949774395405	-0.467896187262189	0.639858830191436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22632275474596	2.64807474181347
Merged-chr15-67903182-4	19.6031076331567	0	1.3407978297087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84350433-4	61.2990433628864	0	1.33442310715954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21382350-4	33.548337660301	0	1.33370869767822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90569381-2	4.49300874135689	0	1.44302841639614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59554832-4	20.0273446617995	0	1.34188725457835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49298603-4	30.329887880611	0	1.33811656662103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69507574-8	39.9160758184106	0.49763447480726	0.269752224785304	1.84478357946196	0.0650690270126277	0.701048934806342	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35708394537366	5.74116959398927
Merged-chr16-97472642-4	27.0403922318443	0	1.33878559565512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87749651-8	109.822538495522	-0.144910809453533	0.221287571714025	-0.654852906248186	0.512562463574029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.32401634824529	6.17787072089097
Merged-chr11-59525471-4	13.6833056515249	0	1.35116897204954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11346401-4	20.7650456209568	0	1.34024136950428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132802453-4	21.0346413787348	0	1.34524123228092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30674955-4	35.8570195865753	0	1.3352465412821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82987934-4	25.0832488741166	0	1.33708095981396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-18610065-4	28.1807359486477	0	1.33924000022217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34389670-4	22.1130194150691	0	1.34385564690224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108797954-4	16.178335540234	0	1.34405408639599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101900765-5	30.0779684567972	0	1.33493450881158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22136729-4	24.3769201962644	-4.18058899760601	0.691168024332236	-6.04858565562989	1.46122927331854e-09	4.07338267017037e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.71122094811404	0.897114879832661
Merged-chr11-49984084-4	17.027908237247	0	1.37383006710364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58477794-4	29.5298222038009	0	1.3424119094559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6293486-4	48.9952843574769	0	1.34261860011523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103709177-1	2.74318756054179	0	1.50825855955104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18936431-4	54.2626296775757	0	1.33635378850898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25320536-2	4.51045920698115	0	1.43029925553751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91765733-4	12.5972684833373	0	1.34427771911319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87658185-3	8.51433378826473	0	1.36633457342284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38714172-4	15.6531386227994	0	1.34236244753883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30789141-4	29.0282953415139	0	1.33597359073159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36231540-4	25.9572093974245	0	1.35251812204158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102443783-4	20.1488750297354	0	1.34576567963892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50305180-4	62.0297850808039	0	1.33753293146518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127851044-4	38.8219608468527	0	1.33690094292263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119028832-5	41.382756087263	0	1.33534395778477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132115928-4	15.143156915591	0	1.35130122446107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97352827-1	2.62349514565461	0	1.54262664862086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148685931-4	43.5967725460072	0	1.33357361066426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3163847-3	9.64965114286548	0	1.36503430601628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103017309-1	3.20041218785062	0	1.45146308629357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72604335-4	32.8633450365098	0	1.33157114583121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21936083-4	32.588454771774	0	1.33440013380735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81572987-1	2.34400170822516	0	1.41771222803584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117322146-4	14.0412994404694	0	1.3408007586585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152787050-6	21.7627567618342	0	1.34042261842706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112318341-2	5.54230161093053	0	1.55476185574135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145359711-4	21.5910045178453	-2.64749165185152	0.42450528564079	-6.23665179540729	4.47035521329073e-10	1.35002243910706e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84934829243579	2.61980486618618
Merged-chrX-155172533-4	12.5720424678063	0	1.34612327730904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53401256-4	21.5982922169333	0	1.33565884072677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80475479-4	17.123736862226	0	1.34112166749659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9649598-8	64.2515994666193	0.300815386870919	0.26361308592535	1.14112463656718	0.253818060335048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.19455369819848	6.62314858963325
Merged-chr2-18835704-4	12.8538278757853	0	1.34208967635624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84043620-6	44.9372969910158	0	1.33161171608856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118747967-1	3.95848492949519	0	1.4890248619966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61977451-4	35.8031713477083	0	1.33680157278933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141309344-4	21.7478412657498	0	1.34000145532549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123322579-4	55.0036077044976	0	1.33326351456973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6061346-2	3.31542937980014	0	1.44507266376552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13988421-4	41.2675851890174	0	1.3343110076737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95902383-4	17.6938463091669	0	1.35006707059967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55643699-4	67.7216072460046	0	1.33445214215324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-56171300-1	1.46873013484573	0	1.86618476042827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79870692-6	40.9568852310402	0	1.33208464770842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63177008-1	4.00118689541731	0	1.38382464494523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102863430-2	2.41281060227176	0	1.46172549723007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100840204-4	14.5190088867115	0	1.34160709858007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150035476-4	10.4179099039303	0	1.35670959531694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37204194-4	23.5932115419268	0	1.3368273791888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33560476-4	20.6053637364061	0	1.3376107247429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126615980-4	23.1313398206393	0	1.33692636007123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13413719-4	33.7429963938289	0	1.33671258353668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101504732-8	60.8597592416671	0.0815250302286421	0.221044572021482	0.368817155214828	0.712264016753966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9904759582106	6.08580438029414
Merged-chr14-61518879-4	26.046647989416	0	1.34884409883885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149862907-2	4.72708327020924	0	1.46107010370069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58321498-4	36.7233801985683	0	1.33732007513899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53255534-4	18.1055588274053	0	1.33791269966631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24756560-4	47.8112607995975	0	1.33719295132159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126587026-4	15.2390041940491	0	1.35095516788374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144247491-4	18.8623067583141	0	1.34154436346271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173337830-4	26.4991518749564	0	1.34603852354079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112130401-4	16.6439869975101	0	1.34280773502097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69502174-8	101.447721857133	0.249538083612434	0.201023849100048	1.24133571578485	0.214481755921521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.32542997449986	6.57718445500863
Merged-chr11-117109854-4	25.3111212252316	0	1.34258590116903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-52080137-4	50.4847158168339	0	1.33350517578935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98005499-4	14.4892337900161	0	1.34903691204525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95572826-4	86.5484584075241	0	1.3370655667503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60810784-4	18.1247580939417	0	1.34933756381108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84827904-4	17.2001066932783	-0.516596190669345	0.861431317494534	-0.599695158717773	0.548709415308142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	1.07599819202159
Merged-chr13-74523049-2	10.4658430616978	0	1.35307642882763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24469669-4	25.8119753176636	0	1.34050405162926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36287003-4	30.9999103055633	0	1.33956670042972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44453495-4	12.2158565954717	0	1.35161751957367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142935797-4	15.4933531428791	0	1.34105116943037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182504426-4	28.2891464104061	0	1.34174133870672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51221274-4	19.7768559851486	0	1.34252271972936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100440875-4	21.5387748042837	0	1.34308758353378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-47954965-1	4.39071541869404	2.81932123469672	1.21675848576519	2.31707546541064	0.0204996212403171	0.326001781177446	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.948471875794396
Merged-chr7-41599253-4	46.5384583118084	0	1.33943241567821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122565272-1	6.16435074059507	0	1.38301449779062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167680117-4	12.5001179928096	0	1.34657288305172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79160090-4	11.5662486602074	0	1.34324823227338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85502605-4	19.9232274609102	0	1.34582335845437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-39431742-8	74.4136383529777	-0.396878421256303	0.216673860884093	-1.83168574020383	0.0669982543805888	0.713410011728586	C57BL6J_F1_Control-BALBCJ_F1_Control	6.51310777522532	6.10098511931422
Merged-chr2-11188454-4	18.9656043884847	0	1.34114974619832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88770476-4	16.753242376638	0	1.34361876517227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135315472-4	23.2006989366244	0	1.3437815165258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77795479-8	142.618355524062	0.74807038740399	0.177268031401739	4.21999602234343	2.44306628989329e-05	0.00184192289115547	C57BL6J_F1_Control-BALBCJ_F1_Control	7.23841449809078	8.0072217524283
Merged-chr5-136030202-2	3.36862827217453	0	1.53005055704571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17901892-4	20.2572865663744	0	1.34099928147443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33467862-2	3.91489785343143	0	1.46150429083348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19844760-4	45.4321526024523	0	1.34742110580132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54754746-8	69.4839692456563	-0.0082521035279406	0.192548003699159	-0.0428573829351868	0.965815221005307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.62030919533647	6.57327374817181
Merged-chr10-111782528-1	3.49809992435138	0	1.39328980574604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-47623137-1	2.71024493686845	0	1.4900569484412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108937728-4	16.1322688153032	0	1.33897982513299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46430035-2	3.78960906998254	0	1.62165113124104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143757091-4	15.6440203943215	0	1.34919784080148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76097419-4	28.6738557112311	0	1.34102012551918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112230704-1	3.04176477222618	0	1.42443642737865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39443326-4	25.3555492102578	0	1.34220267750129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176818849-4	24.3190137476121	0	1.33579380716478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65726982-4	34.2631176346975	0	1.3355407581377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107857203-4	27.1117259088006	0	1.33685632133862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-30954-1	6.09354842585349	0	1.40111452810694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52009018-4	12.0177210567131	0	1.34376970900662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24199966-4	15.7269758436548	0	1.34694382382915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34778413-4	18.3921133920047	0	1.34299228211866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103370615-4	72.2448273817644	0	1.3450665530551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118470419-2	9.28390845441131	0	1.35126266586507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69513416-4	13.9769909782264	0	1.34272329432445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92867887-4	14.7713088382537	0	1.34368092167292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53222601-2	6.79938079436281	0	1.70210007390675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72558123-1	2.06418784179698	0	1.51271480304486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79181373-4	14.2102399977073	0	1.34395663340219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95770674-4	16.2528114586883	0	1.34085739873138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148464609-4	26.9823397186984	0	1.33768394167498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36116763-1	2.50702705410089	0	2.17423560934957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81176283-4	11.8326328945166	0	1.3568110850031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50687901-4	33.4742901683442	0	1.3367610198145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-16951457-4	44.8574204186597	0	1.33845941963061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75796616-4	20.3660974866104	0	1.33479528107695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43081995-4	12.9116388991181	0	1.34864631234408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35101767-4	18.5650912483056	0	1.33584434398982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104415757-4	60.9763149158575	0.241088002131548	0.572467947149273	0.421137992672075	0.673654320025126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94771932792354	2.72305936321973
Merged-chr3-132171799-4	23.9320744648046	0	1.33722606155783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-42171033-4	14.1863441035771	0	1.34465950696676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37753887-1	2.09641106350016	0	1.66784813179302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75797915-8	165.219166708744	0.107882866403258	0.191369554761371	0.563741011666055	0.572930402103432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.81191738689798	6.90318812347248
Merged-chr3-137947751-4	19.1415613244362	0	1.34116858904781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50396404-4	26.6058048828708	0	1.33406141771705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38472854-4	23.669264421485	0	1.33600421134277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60021770-4	18.8008683661496	0	1.33609317074213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-52053703-1	3.37767886281605	-3.22228024205666	1.25969394626027	-2.55798660589173	0.0105280147233091	0.208106309943404	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	0
Merged-chr12-24758529-8	98.4634264313965	-0.552306134235577	0.210211288856731	-2.62738569959485	0.00860437434111526	0.181994235334119	C57BL6J_F1_Control-BALBCJ_F1_Control	7.55659526522898	6.98739997467295
Merged-chr17-42937669-4	10.326132738172	0	1.34335359735514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64834471-4	34.8817377980851	0	1.34673905913535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27862925-2	4.44554076007869	0	1.43881916760764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63897024-8	86.7499830465656	0.925079274879435	0.208301014785004	4.44106945822731	8.95128937874975e-06	0.000812325775191081	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75000282479644	6.63731709791691
Merged-chr8-117267613-4	16.6398831700868	0	1.34488757816082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102426513-4	11.4684832099863	0	1.35692899962507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77444902-4	29.3636442175054	0	1.33652246268911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122815286-6	46.0251501254428	-1.16745579162447	0.43135736235056	-2.70647007219896	0.00680027115108516	0.153003286217648	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96301904795812	3.98336291238983
Merged-chr12-102252732-4	10.6130044697594	0	1.34710187067939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46615791-4	48.3164263790434	0	1.33442400304066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25321820-4	19.7776985863325	0	1.34254385857697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69182301-4	31.0480662823584	0	1.34819168655556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67347319-7	80.3422801616184	0	1.33495967600843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64046060-4	22.0525686863823	0	1.35126808447883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189871659-1	5.38279294587443	0.227006431017257	0.9182588430163	0.247213988456223	0.804742620009768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45601292859778	1.14046671619316
Merged-chr12-85648183-4	29.2093566357487	0	1.337383123626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61131490-2	8.86849537507545	0	1.3659582932929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117721643-4	23.4036422705894	0	1.34608876766168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42080167-4	23.0146777667913	0	1.35176126839299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30772828-1	4.41995978335097	0	1.38955284286477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-36014664-1	3.53131956352356	0	1.42059495349796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96976147-4	24.0494730350409	0	1.34486151488618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4450105-4	22.1259697926325	0	1.3410336833683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88346066-4	21.5075067204765	0	1.33974541934934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38975038-4	23.7972210176432	0	1.33898846549355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71127640-4	30.7540202176703	0	1.34547912468734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73716543-4	12.7432684637646	0	1.34178870352237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71187582-4	12.7974263803356	0	1.35104341519462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67451605-8	119.031421115949	0.293444064882452	0.210681593058452	1.39283200123249	0.163670598882897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.14616617685036	7.4368045039872
Merged-chr16-87735107-2	4.62416163592836	0	1.42881237452013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102113316-4	23.2808645745252	0	1.33486029926577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93394113-1	3.23914619350847	-1.07026003461292	1.09735374871836	-0.975309954390658	0.329406534207322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16318252143804	1.10718024078827
Merged-chr10-108191687-4	41.3578116360157	0	1.33671271431926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151620868-4	26.4793137628354	0	1.33740685447056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89555621-4	44.9131748439405	0	1.33999533540606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79159554-4	14.0075176336594	0	1.35532726854801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78532232-4	15.8425208706273	0	1.34694231966148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12501261-4	25.9484729458706	0	1.33628347870172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29486721-4	67.8063302818898	0	1.33831410143153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11062588-1	2.34165165548294	0	1.59055872313023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107305091-1	2.56609690481499	-1.2584069399128	1.47870955224179	-0.851016981668239	0.39475991958629	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	0.724326877898254
Merged-chr12-26398724-2	8.03344893884694	0	1.36759835987091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88068953-4	10.4163290744502	0	1.3425224173003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34378185-4	11.4200153789789	0	1.35803480034055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99336605-4	59.6433641588869	0	1.33724151244164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91711874-4	45.8884617768611	0	1.33469148314695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90694633-4	34.9994664135132	0	1.33910422198349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6870990-4	26.3997382790344	0	1.39398052559975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4913822-4	19.7679453584687	0	1.33990272740216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30604127-4	23.5566881050931	0	1.34086083091524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105011761-4	21.7155227200467	0	1.3409951791941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128392573-4	20.4430628621531	0	1.34540831936224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148686445-4	16.2335497878108	0	1.35359731399109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8898538-2	6.47484131152336	0	1.39483744281069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55799016-4	44.9958895229593	0	1.33823271569655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32365402-1	1.79402747221528	0	1.49807030603439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38021457-1	3.80810608766681	-1.52878368975473	1.03270144945928	-1.48037333592898	0.138773641802889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42327745627261	1.06702908365212
Merged-chr10-120188717-2	3.26555616255416	0	2.16376524786762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118479319-8	126.91199876745	-0.395894120797287	0.161396537354724	-2.45292821820071	0.0141698611683931	0.256819690095646	C57BL6J_F1_Control-BALBCJ_F1_Control	7.31855370819061	6.8964237675488
Merged-chr3-131691872-2	5.11649405802205	0	1.40840539275714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46524891-4	22.4286704535841	0	1.33833406617338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-89190574-2	4.19636318033622	0	1.45953769414282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44988806-4	15.5857746383076	0	1.34213201386197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98292472-4	14.8924136919678	0	1.35267123283071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66852873-4	32.1299507368573	0	1.33798549904472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160667509-4	26.6456532181853	0	1.34286601551388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9073957-4	17.780303498669	0	1.35113886132067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40093710-4	25.3291350368158	0	1.341385049177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152406249-4	32.8978204325918	0	1.34004464265449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102689870-3	26.8158566360048	0	1.3348265909308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61561565-4	24.8450288381223	0	1.34429630273972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145037177-4	21.1352122687165	0	1.33678022303675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59784093-2	13.217079052925	0	1.34973766748386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23903042-4	23.0944975667086	0	1.33573649602217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112786423-4	32.0913873713658	0	1.34218540446184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54405261-4	18.6255149832131	0	1.33607510572772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99000790-1	3.77449373151839	0	1.40466509512773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120882542-3	12.0346187001783	0	1.35585770254123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106511832-8	69.7297064606648	0.0580853021738627	0.240839548698228	0.241178421433781	0.809416834534752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67349271215894	5.75884301073081
Merged-chr16-25053123-4	34.861523837715	0	1.33284170000748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95323183-3	36.8830718020035	0	1.33239822907513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52847422-1	2.17727517708707	-0.437521695166953	2.06477116736632	-0.211898394399329	0.832186303238617	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.55634759613363
Merged-chr7-122260293-4	18.1792731273336	0	1.33652271111786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73176035-4	31.9845852301995	0	1.3400627247467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95033220-4	27.2214091869903	0	1.33342772821078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39936672-4	23.3990074731092	0	1.33489359722383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71223497-4	19.9262064674442	0	1.33825514903035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3355569-5	26.540212855543	0	1.33571404479075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132607911-4	11.2883152160234	0	1.36159593390897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97962560-2	4.08706807656857	0	1.9679739287015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41943253-1	3.989908192996	-0.700182970423914	1.11720435146449	-0.626727750841712	0.530837709912063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4944959016211	1.17858215524007
Merged-chr19-41341830-4	25.3165433050354	0	1.33467584827222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87849531-4	25.6181664074082	0	1.34235793723304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134679633-4	38.9188621349363	0	1.33546322734276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136558983-4	16.2789892063457	0	1.337809403577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111517094-1	2.57299715254688	0	1.46154738697841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74570781-4	15.9506317307771	0	1.35097047010571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10532541-4	11.4361760694509	0	1.34135839435221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126845786-4	78.611094580192	0	1.33792349990855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126572496-8	51.2659211146631	-0.0938470848781067	0.246529184063922	-0.38067332772161	0.703445662734713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.09827793473024	6.00039326087737
Merged-chr12-17679756-4	33.585049165557	0	1.33295281071117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117299119-4	23.0937978119281	0	1.34541183702162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39353491-1	4.23882114691291	0	1.45466031674212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33002924-2	8.53415524794597	0	1.46451788784974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73957858-4	14.3962776626689	0	1.35624309548035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99006702-7	43.2858479373087	0	1.33753717751006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87724967-2	12.7030697249667	0	1.40466815377299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73603772-5	34.6218379777249	0	1.33293313357222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65076301-4	16.6917450459972	0	1.33671175272947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94612469-4	14.638590260474	0	1.35473078238564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50413406-1	4.56045214682648	0.360794375053407	1.19707204224511	0.301397378203517	0.763111493313721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41083941945204	0.94927122251658
Merged-chr2-38479729-4	25.2561486163356	0	1.33888055425777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143115255-4	22.8876847537711	0	1.34611345395681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115857548-4	41.3616223639033	0	1.33678084018995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45486776-7	82.8508768889478	1.48356988313453	0.262883869588497	5.64344204707889	1.66683650136991e-08	3.62430261511867e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89010690786584	7.42832079526228
Merged-chr18-20784892-4	29.7811887221608	0	1.34759774836283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19415787-4	22.1271844334568	0	1.37867744075262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122794375-1	3.47335148483592	0	1.96162462525564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10356955-2	4.27293797881969	0	1.44146257086892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94355560-4	13.3929830231615	0	1.34246704396561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25441274-4	19.1771260174676	0	1.342467192759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31727663-4	28.6696324793307	0	1.33677278360122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93750647-4	19.919442976498	0	1.33656264445377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30831490-1	2.36711093592709	0	1.70197190500004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70925013-8	55.6394263950202	0.03295983698514	0.251523070956049	0.131041008921601	0.895742866662861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.85899858114549	5.87755063446715
Merged-chr14-118507497-2	6.17197732401048	0	1.3932496340363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92199652-4	19.1193291368115	0	1.34171986521219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44800179-4	20.5933613073516	0	1.33831760865666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44344852-4	12.7438924793242	0	1.34817851275353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11039007-4	32.5853528868388	0	1.33858780803554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84984829-4	41.4209997234098	0	1.34157594348522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15215054-2	4.95656649794645	0	1.36557820076459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4508093-4	48.3582630881099	0	1.33465267976039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24464563-4	19.5654312614655	0	1.35590132840099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52158977-4	18.3060834392989	0	1.34686400486744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99993706-4	31.8469660142881	0	1.33993232461125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45341514-4	27.367257025848	0	1.3458010334609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4863083-4	15.4322221851668	0	1.35305519343314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6060097-2	4.90550173444495	0	1.4440981745867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116552447-1	2.34462209337083	0	1.47413771414316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53414996-4	36.9462565216497	0	1.33338955889116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86078921-9	162.504272198916	0.201026276567845	0.210841819535804	0.95344593881058	0.340364175004822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78631825925247	6.96257533548482
Merged-chr1-43462881-4	26.3458201709926	0	1.3355330689593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55389869-4	31.1023045391351	0	1.33733776114838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75034441-4	30.2612573527645	0	1.33492645225255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32694857-4	12.6999576237871	0	1.34459926185586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47225545-4	28.1755181237774	0	1.33934069083873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59736205-4	18.434233410479	0	1.34759353723577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56151945-2	3.47288396694648	0	1.42982526941145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16491535-4	36.3351236645002	0	1.33546984966014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15021716-1	2.44812230873663	0	1.46074705376148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65635908-4	49.0293929870595	0	1.34111225547785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124928097-4	23.1788196233614	0	1.33386754209073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-137478449-4	21.089080532072	0	1.34237582716337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127480580-4	15.4379239698953	0	1.34277884763904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83870927-4	34.2906812587901	0	1.34109929843793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64789472-4	25.9045292486932	0	1.34099618770399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66199999-4	17.4262905047094	0	1.33939004934342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7863068-1	2.34872744906504	0	1.48712430451242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78490406-4	17.2717610376774	0	1.33933970679012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146135100-4	17.0429177199085	0	1.3447978263501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26895951-2	5.59404987081149	0	1.38308884624398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123815641-4	21.2314380338954	0	1.34285962452043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125458735-4	15.8984682885043	0	1.3422514705035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114827642-4	18.3495628350326	0	1.34471250103384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88031414-1	2.95222791259666	0	1.45457867031895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47734212-12	200.744497364696	0.0450439505595328	0.173492119503453	0.259631104216445	0.795148341174023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.33983035771077	7.38793614282455
Merged-chr5-100566971-4	21.7117103704181	-0.0351818802676848	1.09283838113259	-0.0321931228579502	0.974318040502529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr3-133583149-6	67.4996745725652	0	1.33833498019635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7272205-2	3.67933610023536	0	1.40276271115728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14716511-2	3.35852447604492	0	2.1861660056386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-40531594-4	17.0643088392723	0	1.33938451906547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86819340-4	50.4598000213553	0	1.34506037832153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145774490-2	7.06079421852546	0	1.48290041687465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27199036-1	2.7536389205508	0	1.47022534880151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-31151675-1	7.07899628031108	-1.16509382605157	1.01986648359246	-1.1423983872355	0.253288461342639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	1.13759034240505
Merged-chr4-150212686-8	164.689305579963	0.0402504296757067	0.174034523956699	0.231278419710111	0.817098510818104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.57680938481756	7.60757484209607
Merged-chr19-43669586-4	17.1334952060055	0	1.34309541858257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63815457-2	3.92570720330943	0	1.44446467775322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134196556-4	47.9303057089739	0	1.33552702922656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84802835-4	14.6112938537463	0	1.36387670769003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-50970115-4	13.9589284947357	0	1.34572869176176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-38637-1	21.0826164194205	0	1.34607365779944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92886395-4	27.8405445060471	0	1.33756345618701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115066613-1	8.83029198471968	0	1.37208206835695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29461410-4	32.2998072406204	0	1.34146171751801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167101896-4	13.0816650466239	0	1.3414551622817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146271315-2	8.10279016361039	0	1.3726772911282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4913195-4	55.8329655713825	0	1.33573817562407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65137912-4	14.8722147406916	0	1.34865559087146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26441618-4	12.9848716478772	0	1.35984055613732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38460126-1	3.09001985805974	0	1.43001167638369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52088562-4	29.4953045298933	0	1.3438425950935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73928210-4	15.5009134548478	0	1.33823168873575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143817707-4	32.2599688925333	0	1.34008412923454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136675162-4	17.8589318440053	0	1.34487739376432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65585582-4	25.1666621333225	0	1.33998119513387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75775398-4	18.3951080860314	0	1.34050595257621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-11985-5	540.328517898104	0	1.39593292425277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64680218-4	13.7353354545464	0	1.33761766690001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67116925-3	62.2027741018612	0	1.34076782088214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145860715-8	78.1481710306134	0.0716629696154498	0.222284115111509	0.322393570856379	0.747154554156492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74558914695398	5.77622883175447
Merged-chr8-70611404-2	8.88153139696575	-1.14692385096756	0.878845011082541	-1.30503540044541	0.191880793777179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27581724657147	2.23869582718247
Merged-chr5-122400800-4	19.8805576930327	0	1.34249131001474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37451702-4	10.2215441227875	0	1.35431136152432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8589773-1	3.51034415625889	-1.55811124183226	1.15559371580355	-1.34832097174292	0.177555169752146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52099112156681	1.40298672487694
Merged-chr5-143475554-7	46.1882639116211	0	1.33533757098629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6742286-4	29.8974688898821	0	1.33643005966675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23762796-4	21.1725466686437	0	1.33670260097241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75933632-8	91.7531791803714	-0.00145842778757232	0.204456116983631	-0.0071332069154433	0.994308572599006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78003813110328	6.75146145419867
Merged-chr3-122566740-4	21.4649368487683	0	1.33362073640174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39585648-1	2.86169210795137	0	1.48008541038303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33900358-4	30.1449023789265	0	1.34390760793671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3155987-1	8.35530827066552	0	1.40262734315914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121120315-4	37.4501687178993	0	1.33443230246589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36961004-4	21.883742254773	0	1.33511800308923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55488920-4	55.1950952427977	0	1.33617069866768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43667254-4	23.7336399057856	0	1.33894109304665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117393424-8	81.3822363773341	0.124189399763391	0.198296660812079	0.626280842323825	0.531130749801501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.73447614052181	6.861365872791
Merged-chr2-116972272-4	45.2186377963953	0	1.34374215321854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8836416-4	13.9180052572517	0	1.38992316092983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88708853-4	24.8957200297148	0	1.34536672659994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75436117-4	54.4741158160739	-1.55038788428921	0.808119266364558	-1.91851370066185	0.0550459065793741	0.630210706770892	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16613290694808	1.15786140276852
Merged-chrX-144234666-4	13.3713538316906	0	1.33832760402504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146170826-7	38.6801823019652	0	1.334090515705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102948701-4	28.7388111457025	0	1.34098894413216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41951356-3	8.32718272430401	0	1.36474242590263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72904009-4	31.9582123611929	0	1.33291426595643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72763191-4	10.6712409342044	0	1.34246751741887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34189557-4	23.048502759939	0	1.34248875030772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37723530-3	16.5807813812484	0	1.34681207402178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58502139-4	61.0677633364516	0	1.34070445311081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53181674-2	5.63491179069033	0	1.45413442526695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-107178958-1	4.33849405565923	0	1.38558044917645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55389894-4	28.622883058242	0	1.33635096403718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9713648-4	13.9348361743439	0	1.34891660145389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40840633-4	27.7997413002062	0	1.33554634561016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121570281-1	2.2919315763256	0	1.55666385640043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94498244-4	21.1532085784872	0	1.34234132717764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24827383-4	15.0400791462503	0	1.34674350932596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49850522-4	16.3863846475588	0	1.34703287325298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117830598-4	24.2692740369035	0	1.34274074088138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152912425-4	28.9785996453152	0	1.34452834161253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65575739-8	44.7337755054029	0	1.33510719980697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84638780-1	3.47114377349833	0	1.40836879165881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64622490-4	44.4047529602413	0	1.33512999612731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11456514-4	58.0529499012568	0	1.34312811549754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4501837-4	16.1719616469525	0	1.3393036392455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29540516-4	17.5351691212977	0	1.3431719789586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88102908-4	28.6538666725006	0	1.33987472321122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20076821-4	13.9697061521161	0	1.34127802499913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74775648-1	1.58383557726153	-0.0348350918010495	1.53497195444367	-0.0226942855211157	0.981894134156733	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr15-67313902-1	1.76875253367859	0	1.64620242013634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128479942-4	22.1914197630494	0	1.33731332468492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32194510-4	13.974091940855	0	1.34170687300769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108783746-4	33.1539557550631	-0.693833727100024	0.986155178929397	-0.703574591428169	0.481697739317815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.723581231604105
Merged-chr10-37338457-4	79.0581744118914	0	1.34484781756814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117435583-8	85.0739482745854	-0.0458789517926228	0.168336830952288	-0.272542565599481	0.785204866867213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.85722704054461	6.80883753907182
Merged-chr1-144314668-4	22.751008043643	0	1.34144859205902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31356671-4	45.3876888905347	0	1.34048283134901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146777209-4	27.8128230122799	0	1.34222178385074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26559430-2	4.63944855347749	0	1.45574705643626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81221579-4	13.7611324514412	0	1.34820157117319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5936466-4	28.7846177896577	0	1.33598707394476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-42210221-1	4.97284427246571	-1.75460259892271	0.909003711463835	-1.93024800316507	0.0535761163125773	0.618463390663706	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84369266306361	1.94919190003171
Merged-chr7-129575888-4	17.2231151179641	0	1.34558110939479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69095139-4	107.54860310804	0	1.34348074609103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23256146-4	75.6283258172101	0	1.340393076008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32198769-2	4.54745118203166	0	1.86599132940302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87405756-4	52.9406639725308	0.253162097486532	0.925117375964313	0.273654029276711	0.784350508863958	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.730937814817307
Merged-chr7-63911061-8	66.3689242141604	-0.161537626272485	0.255064461715598	-0.633320789521054	0.526524179838703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24950657290007	6.10121852126037
Merged-chr7-43667456-1	9.21512257617023	0	1.36265957417993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5604398-4	30.8798876345002	0	1.33837411033385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106627425-4	84.4592786419533	0	1.33224035884449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64330604-4	25.3710065220072	0	1.34075670751262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23896779-4	37.5565778077335	0	1.33474688890734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65552454-4	37.0986770320727	0	1.33731507116684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55013092-4	27.3483517982628	0	1.33649569825341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14186773-4	33.3028469078616	0	1.3372062768129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13296610-4	33.4927485449304	0	1.33955533222872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90522079-4	20.3731652480249	0	1.35280976944472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165717895-4	22.584850340771	0	1.34729725900432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130797204-5	33.2650367048225	0	1.33906378996009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64305691-5	74.5391188240978	0	1.33959176253278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54870765-1	1.74096180137753	0	1.44237375137675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59203135-4	12.2894316685004	0	1.34682460798774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17257007-2	18.1284659085527	-0.350773053689162	0.642136061446506	-0.546259702186783	0.584887432447175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31417261323036	2.35163392625407
Merged-chrUn_GL456389-10405-1	8.69568573137209	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3160532-3	21.8779751327896	0	1.34837729558578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80533827-1	2.76819083542747	0	1.41999329213932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108340528-2	9.71126102042609	-4.76408553089964	1.02007181588923	-4.67034326082877	3.00696844604304e-06	0.00032452326904688	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15924055935844	0.413263464506793
Merged-chr7-122206322-4	17.90484288636	0	1.34614003451845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55196567-4	29.9196339165721	0	1.34045161073129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10873759-4	14.0205377411126	0	1.35830163791494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3143337-2	10.2854012396507	0	1.37077693963927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117146289-4	13.0057783979999	0	1.3451836505058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52938438-4	43.3363207394212	0	1.34293921982287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46360073-4	16.6478183519234	0	1.34627627704898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-21959195-6	34.6617856302748	0	1.33441695500913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75179838-4	31.7588811516813	0	1.33770110148199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81665121-4	15.7066918893619	0	1.34467373157243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3389489-2	4.31994643256544	0	1.4672084849621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167093695-4	30.2771082400165	0	1.34347545667335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150557035-4	22.3529623311244	0	1.33948361126194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59145796-4	12.3092718513964	0	1.35020047852071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84107699-4	18.3353392037922	0	1.34785306931268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-117625550-4	26.5452947218081	0	1.346316821555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-13120-1	176.200768775666	0	1.47079117850256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63148758-2	5.23755289811751	0	1.41810611257629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58470672-2	2.58989429385611	0	1.59189926117863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34244930-4	27.2747502330756	0	1.34106324097772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-98038400-1	2.09308419477433	0	1.6450342844748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45299947-4	15.2806250706796	0	1.34519312384095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36037245-1	5.53862278659959	0	1.37281627073884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80948953-1	26.0634810411867	0	1.34379215033476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8584536-2	4.85125291217859	0	1.40355634765039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124492778-4	53.2978276757145	0	1.33685639573785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152402472-4	35.2128893509391	0	1.33553328870568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111035362-4	13.9569268305257	0	1.3458900266596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83550509-4	20.7602328599352	0	1.34636297233848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9885079-9	113.742446371245	0.656494577583147	0.184488138974059	3.55846495733505	0.000373028547218591	0.0172721114124833	C57BL6J_F1_Control-BALBCJ_F1_Control	6.94011232078297	7.60979750951076
Merged-chr14-51942428-8	67.3158911504586	0.0344788890299879	0.216119228506382	0.159536424723864	0.873246263016238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30557033207284	6.33220788447428
Merged-chr14-45667307-8	83.0257369267278	-0.404728760075228	0.270270704445805	-1.49749400662988	0.134264763914924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92515581922857	5.4520513281217
Merged-chr8-79163034-4	29.0974406914022	0	1.33535161991501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19216422-4	20.0875057578811	0	1.34280066278211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9556223-2	3.10986055189337	0	1.55904090078508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89632493-4	22.8555474467165	0	1.34248067453833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72351863-2	3.00520669876302	0	1.4527961893303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5845305-4	15.0867578930188	0	1.34701629170135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73433673-4	16.7406881318777	0	1.3378339945856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79087853-2	19.2444245576707	0	1.35588563934485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84762667-4	28.6320514480459	0	1.33805367785454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85003700-4	40.2610652224328	0	1.33835821125488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83732314-4	44.7057045850644	0	1.33438964925393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81074673-4	17.8940229745273	-0.840352985911012	0.802556296381572	-1.04709537474175	0.295055592340741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82166021832917	1.11893902259477
Merged-chr12-55474011-4	47.5408992068231	0	1.33334653389893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32931931-4	21.2291752454674	0	1.33891649926509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-141070085-4	45.0102783198469	0	1.34072266830916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45181935-4	15.3548699288526	0	1.36821551849854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100084432-4	45.5981117308223	0	1.34629466732741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67226205-4	22.3354086578512	0	1.3361292547927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180826804-4	17.698300755329	0	1.34358218193461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83834145-2	2.68152824101093	0	1.71671125814037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116955115-4	18.4340067031479	0	1.34621639859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76287844-4	18.3913338578055	0	1.34033432560531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146592825-4	36.5988377817005	0	1.34213424976319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44355317-3	27.4243475470552	-3.36471189134415	0.84979982183547	-3.95941703550462	7.51329388704939e-05	0.00461728712452519	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99841388502514	0.577068348605183
Merged-chr8-11103961-4	23.6086391846992	0	1.34360460525566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44476611-4	9.92969627013388	0	1.38664589606473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-121009306-4	23.7501163205132	0	1.33955604760557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127761157-3	55.8618719531038	-0.377893482656005	0.632613864890095	-0.597352514114841	0.550272050423352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33390710713189	2.85085706467355
Merged-chr5-3300903-4	19.0782000367776	0	1.34208725109661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124709988-4	16.4507908672758	0	1.35797404859119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183669842-8	48.5166890880715	0.998013562716295	0.266580834071677	3.74375587124149	0.000181289804470293	0.00957699949582182	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81444779952106	5.81966284402292
Merged-chr17-32252116-1	2.40628150958466	0	1.4590732915543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77804885-4	17.3245269767168	0	1.33537022954164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84656945-4	47.6908029239447	0.313966608905312	0.61487017874557	0.510622599303567	0.60961534810621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17813337661218	2.86228010699883
Merged-chrUn_JH584304-40700-1	3.7245504153625	0	1.81621578614776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8539695-1	2.45105947029451	0	1.47885430966192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4266516-2	15.2394075847119	0	1.3446307417516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16589602-4	20.7226935050038	0	1.33490210114059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4804201-4	35.7090862998498	0	1.34292595234923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120453362-4	47.1361848794385	0	1.3400726441329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110602411-2	7.1005341022978	0	1.36878377385572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69179347-4	16.5538430947917	0	1.34771110670592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59544907-4	50.6209994760426	0	1.33348883173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73681369-4	17.488793409779	0	1.34931745314196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46931401-4	20.8733354595241	0	1.33523677167061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86577382-4	58.7782507622909	0	1.33803972723329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164521915-4	22.1840071501697	-0.0371168040744646	0.64102751997392	-0.0579020446360473	0.953826654472693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94283950978213	3.00393455483044
Merged-chr15-99342805-4	17.0376152969261	0	1.37022237602659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121548293-6	45.9486593317054	0	1.3378473630533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-3232758-2	8.16969728572771	0	1.39814800316001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11455922-4	23.5968751306232	0	1.33925790938008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54306194-4	31.2113516026081	0	1.3516577806784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31423293-4	29.5934864256016	0	1.33580678347731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60738273-5	27.1806860314092	0	1.34107332002849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136465599-2	3.77010521196393	0	1.41164050268318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63828965-4	20.8708493651947	0	1.33588368118709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47295433-4	32.4563772894731	0	1.33506182024209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138144617-1	1.83258841842096	0	1.64084086771497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143020949-3	17.3864667333127	0	1.34821753781115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122895670-2	7.02036446570143	0	1.44198915954613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84184170-4	13.9981000459811	0	1.35083814195267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21180058-4	21.3473435561793	0	1.3500038036814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48672045-1	4.20830998401323	4.35403540706624	1.25120270961331	3.4798800974559	0.000501638232308956	0.0214500450626394	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	3.90158371610066
Merged-chr12-26440508-1	2.91227568797847	0.782213146973419	1.21196285629097	0.645410164934645	0.51866141785448	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	2.13795322910058
Merged-chr15-36705574-2	5.0295146929869	0	1.45508390083628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89848798-4	47.3107601757388	0	1.33531334930807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53529619-4	30.0348507515267	0	1.33393565584977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127225241-4	16.9127507754825	0	1.34006560388079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65739848-2	15.8527174866599	0	1.34407326399427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117108286-4	35.9654121757363	0	1.33400516621176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-44048474-2	10.5021361486282	0	1.36422640927592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70562058-5	52.1449881901635	0.0113366072648473	0.407987130412022	0.027786678597922	0.97783229080032	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76935026701606	3.80346840718302
Merged-chr10-86171389-1	2.48144468372364	0	2.31529411172563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53155683-4	93.1677772496301	0	1.33812258381259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62541734-4	24.4751647839148	0	1.33705818485219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130800301-4	60.0948116290041	0	1.33905791414314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66235289-2	5.14651971329937	0	1.42364060229105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133918581-1	1.43966259224001	0	1.74214887065865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136531815-2	3.9595289253237	0	1.48268053656299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114168371-3	16.4334680093301	0	1.35715343056522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132221776-4	28.7178525058688	0	1.33400608889329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91869806-4	66.0384599275473	0	1.33789124613844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11016722-4	24.9643135042657	0	1.34003662283646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52822384-4	15.7250099673591	0	1.34593436564435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69448096-8	69.2711266211637	-0.253149693049257	0.235217728283162	-1.07623560050928	0.28182190183282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.86881820235627	5.6025124257263
Merged-chr4-122955537-4	16.3305559354279	0	1.33951713044236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-56903220-4	21.295961668053	0	1.34307191444603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79120309-4	12.1882552249892	0	1.34871358667286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47063938-8	110.141526186897	-0.224999185289698	0.186293880349226	-1.2077647685899	0.22713775679257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.62478716755239	6.41890868186622
Merged-chr8-126839751-4	54.3109882444862	0	1.33788990964664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70195503-4	16.4705605769919	0	1.34195785709948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-108954528-2	4.20516471511337	0	1.39484463215796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158133267-4	80.0069630468984	0	1.33951294890277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79813003-4	14.1425744165862	0	1.35117533078548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30945174-4	17.7756630699078	0	1.33862911683818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24284370-8	63.7562070182863	0.177451785984342	0.237360136744039	0.747605678099602	0.454698038812501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66185053184544	5.91683129313669
Merged-chr13-3526478-4	23.0325469444911	0	1.3422774890334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85348517-4	30.6796247877794	0	1.34071388082557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165644577-4	19.4306853045232	0	1.34161397192914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7595384-4	36.2211866280367	0	1.33571224401965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48274831-4	14.5891965972975	0	1.35343762446051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91865166-2	11.1085051156861	0	1.36402124748937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100344510-4	28.9187050941058	0	1.3445171441063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76366056-4	16.1739446489144	0	1.33948996528633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159735682-4	21.1371967405724	0	1.3427814569213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5730845-4	48.2994778682506	0	1.33569447022242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-19857810-4	39.0288723775645	5.03017228801711	0.714114546139985	7.04392917803843	1.86893164361583e-12	1.03666586954401e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	6.0278212621946
Merged-chr1-43474759-4	32.2701448812076	0	1.34137929365176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108296594-2	3.26723320408186	0	1.44614423127531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51451747-4	12.1278400168443	0	1.34888596424649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128382595-2	3.90921660937133	0	2.11967339408513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116932481-4	33.8469084744467	0	1.3361615093159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68378332-4	37.4772480894637	0	1.3381263025405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52891275-4	27.6439855851808	0	1.35566750143439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18600396-1	3.03887853088713	0	1.43150610902343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-98663845-3	22.3169644285889	0	1.36735262448072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32352800-4	32.9514891254328	0	1.33624776307834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114226776-3	19.305875074213	0	1.34480889823197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17005057-4	47.9898917465361	0	1.34434027306872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45276043-1	2.16171753549023	0	1.54881515942115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17907036-8	91.3727957500651	-0.201848219328422	0.280125789891399	-0.720562785049801	0.47117855759686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.093572094156	5.88166912126769
Merged-chr2-34780679-2	13.0217748843101	0	1.64663364149636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91585412-4	13.5590426793543	0	1.34142770366655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100100865-4	18.5589192804402	0	1.33714570917485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57819136-2	5.55428988468556	0	1.72972123646962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-81742732-4	15.304736695306	0	1.34852946888024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33175049-1	6.48858474287991	0.452087755307514	0.835011821859314	0.541414796141273	0.58822171101638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	2.6664027184596
Merged-chr11-23067827-8	76.1663089225208	-0.0746802428974455	0.197035818626469	-0.379018614067429	0.70467404128038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.27659382726917	6.19914556421954
Merged-chr16-58509745-4	26.2608919098498	0	1.33929765002567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123928249-4	31.1292600131471	0	1.33470260942038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55808008-1	3.73825291029272	-0.411795749288535	0.950428955668134	-0.433273572772254	0.664816034767437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09093093088911	1.45526469271556
Merged-chr10-25366888-4	50.276134937179	0	1.33786210347223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-139485144-4	13.3121215931407	0	1.35557060973308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110166381-4	29.1174363973693	0	1.35184705565849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80177768-2	10.0656504005985	0	1.34472657291278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122769446-4	28.2831571602969	0	1.33817817099569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34044899-2	2.2923417433589	0	1.73973085820262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39801318-4	23.6405243287848	0	1.33927520330822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49971476-4	34.1074552623305	0	1.34089829825912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-7980836-4	26.7905278661475	0	1.33977060958566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76471330-1	1.99188958546664	0	1.74915796155579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42103115-4	13.2480272113304	0	1.33880461139255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59219531-4	14.9941777170677	0	1.36133813109374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88110006-2	5.00757491417359	0	1.43328788011279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3176688-3	21.6791520681333	0	1.34764671261337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67272543-4	16.9644686948866	0	1.34186785152997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148585918-4	10.9206803575051	0	1.34546783398953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62715222-2	5.55435708577557	0	1.47963423496396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38473866-4	36.0782163217333	0	1.33759306353377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-26864251-4	28.9262421540131	0	1.33903001999873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61278090-2	2.70521443685167	0	1.48045072395312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49818745-4	18.744865726094	0	1.34239424519703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96691093-4	51.3509872264497	0	1.34808329939609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25634596-4	15.9052687031298	0	1.34119514218652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53122048-4	53.5846082201667	0	1.33961035423796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87985035-4	32.3380026576222	0	1.343306388946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59816330-4	15.4131058453838	0	1.35373142847609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75057025-4	39.2715449172076	0	1.33973222403567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71669722-4	14.8807974038962	0	1.33889162198932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81643707-4	39.471665523226	0	1.34094117771416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62297973-2	4.10540910675107	0	1.40499674979352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35942337-4	35.321370480909	0	1.33680570899684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37788902-4	25.8492741683165	-3.75537537972856	0.535355486470762	-7.01473221930575	2.30389776847496e-12	1.23997602768842e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.94387520372174	2.06645909458177
Merged-chr10-44589494-4	47.6936994498658	0	1.33662611305773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-10253267-4	24.9009555240336	0	1.34386229388413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57198460-4	17.5513441069101	0	1.34512640405899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3447656-8	50.1866739415957	-0.220067691083204	0.252920731347279	-0.870105388004095	0.384242813477317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8883692999587	5.70213418860994
Merged-chr14-17414529-7	45.9440306988556	0	1.33505920823629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34845054-3	22.3273680431486	-0.0478887826437138	0.720609342088443	-0.0664559558788459	0.947014822269054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	1.97731223551783
Merged-chr2-152810384-4	26.357322182091	0	1.33591255998839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-87171676-4	28.65855895701	0	1.34024950853454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76553214-4	29.4711666694431	0	1.33635452219409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167271297-4	19.2553900537996	0	1.33517871300309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-93988096-4	42.6456386466778	0	1.3318836952199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139248237-1	3.12572585227876	0	1.47356168062481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91710714-2	7.84759231708108	0	1.36078014044582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60252773-4	44.1970516517274	0	1.33366671895901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37537504-4	29.5424901776941	3.83649823660947	0.477329264198499	8.03742515777129	9.17459001349101e-16	1.18743223462704e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73515138435419	6.1939466771892
Merged-chr10-67009965-2	6.8068160724897	0	1.356368046716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70468111-4	35.8319072245303	0	1.34642592682081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43819284-2	3.99746011980045	0	1.56334489551892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-91303114-2	11.1088120006797	0	1.37629550190672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75887358-4	28.4311345842466	0	1.33961487156062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24311879-4	27.8636339098721	0	1.33691707672033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59241499-2	9.28411056825393	0	1.41935687405177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97673028-4	20.5023071838699	0	1.33662534996835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59575746-4	17.994542058817	0	1.34511208324349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126829963-6	71.2782792168619	-2.53186189361311	0.355183429396231	-7.12832211208998	1.01599792926614e-12	6.4219338880207e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.03398067994252	3.5571373108782
Merged-chr5-92375540-8	58.7939508212213	0.153201528901611	0.269115122228342	0.569278781634653	0.569166963976233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.02543046428909	6.10478167451305
Merged-chr6-31453697-1	2.58971083355307	0	1.50491940911459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62324571-2	3.45982912616728	0	1.47419806454064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85670291-4	14.5010631401833	0	1.34485560270279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99382500-1	6.41099085726384	-4.99888241653998	1.0331967071924	-4.83826785523146	1.30975555107895e-06	0.000161444448982088	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81778603915042	0
Merged-chr18-23812895-4	22.6628205277915	0	1.34731091472763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101332607-4	45.3220091575627	0	1.34029599494404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101515679-1	1.84775420170586	0	1.51711390742012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155051056-10	77.3617898649266	-0.597283458129648	0.328214510961086	-1.8197960120065	0.0687900752860152	0.724401337170186	C57BL6J_F1_Control-BALBCJ_F1_Control	6.08999904911317	5.36901539251241
Merged-chr9-119352237-4	10.8457683888518	0	1.34986712359722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115847224-3	13.2650195913259	0	1.3514396777995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20843117-1	6.05323445729797	0	1.36472735307043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40594979-4	18.2368590141902	0	1.33952133643939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119738824-4	11.3792541708055	0	1.34609221447464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19501860-4	20.3766981583608	0	1.33977458523829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-11226-3	361.352300583811	0	1.40039993262205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6392004-1	2.97931324156813	0	1.4139805476729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-7955747-4	19.6446689417899	0	1.33859327091391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76929333-4	12.9079354719458	0	1.34182197946924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30059498-4	17.5925311963749	-1.88991546617805	1.03522579547628	-1.825607007125	0.0679094795684263	0.719448723418454	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89306236960967	0.465515277017237
Merged-chr2-170202183-4	14.1054216567255	0	1.34381001228227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30040075-4	20.3460320495982	0	1.3527954943454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19095736-1	2.06939462743218	0	1.58550198099772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16637861-4	43.5114200428617	0	1.33462200938526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20845904-4	13.9513342446234	0	1.34513588723648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28217791-4	9.73469221249039	0	1.34283223586022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40626720-4	32.9094726136649	0	1.33621562353906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77266431-4	78.784919255507	0	1.34124492765689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96898345-4	21.3983479683603	0	1.34171711884204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11770138-1	1.93756160358127	0	1.5129589104205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121636389-2	7.88651186082633	0	1.39461489253309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55504950-4	28.4213625486278	0	1.33723409186219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143579941-4	38.944238207778	0	1.33678187631806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3904122-4	20.1728030117774	0	1.34137812686794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73731073-4	16.4485852226703	0	1.34746145045955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101277345-1	2.87804210808938	0	2.08451020595457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75273751-4	14.6818930374985	0	1.35422269920176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32268141-4	19.9914356994116	0	1.3468909055994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-20921214-2	14.5497963669589	0	1.33906920180835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7714289-1	5.05787921443127	0	1.38813759031852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166420494-4	26.9853888413059	0	1.34333506308974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53227946-4	62.3697171520805	0	1.33398567906209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53430278-2	3.32951266962974	0	1.61694848120435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165667111-4	37.6151883839181	0	1.34840411791283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31736328-8	89.2819760344047	0.334916278260794	0.250366887902044	1.33770196637117	0.180993609736679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82785087362449	6.1569443782084
Merged-chr9-61032257-4	14.6600209811192	0	1.35955935744372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45584247-4	23.053792796284	0	1.33752315144959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43877625-4	28.3563023264096	0	1.33483029946211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66468031-4	52.672948583245	0	1.3338652840049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101656285-8	153.968730826896	-0.340060092933635	0.167155227001923	-2.03439700350934	0.0419115837481855	0.523981550360538	C57BL6J_F1_Control-BALBCJ_F1_Control	7.88276570095042	7.53891805802657
Merged-chr2-167926233-4	24.95046894441	0	1.33617848631782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35394292-8	112.398085151299	-0.0612478993395408	0.184298877565216	-0.332329204326638	0.739640689976788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.94046442313051	6.90891180678962
Merged-chr11-90241002-5	34.9068530567844	0	1.33623532223824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25012947-4	14.7481608089501	0	1.34043173815662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117299858-3	36.7109354647078	0	1.34665906846418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26440009-2	24.4971841209375	2.69968714249079	1.04161916986641	2.59181783572304	0.00954703086423869	0.194734353001558	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.77669505248885
Merged-chr6-32479894-4	16.1629000550255	0	1.34474232816577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82225993-4	85.3536121828644	0	1.33673839286126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133688727-1	3.41730847697947	0	1.44521253326205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21735945-1	4.21162445273399	0	1.40233553695186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34036518-4	30.207522915871	0	1.34116199468258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67026081-2	13.2275725800035	0	1.34661352120565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109914409-4	54.1303981153959	0	1.33667383761742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19163176-4	16.7901021009121	0	1.3381192747328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31116594-4	47.9050856805936	0	1.3379085288065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101543677-4	16.1396003887438	0	1.3414915400961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10824774-4	13.8590351702261	0	1.35064028751651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23874803-4	18.9475576528276	0	1.35693182723385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35166037-4	20.722066651613	0	1.33796807092135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8823827-4	24.4711971759945	0	1.34360158618353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-89177329-4	14.3643932315243	0	1.33897186185978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58560410-4	16.3615237054193	0	1.34828214830546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4260733-4	19.1161001733089	0	1.34471636545602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116020178-2	10.6370301698214	0	1.35277127444855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120256716-2	2.15009089419345	0	1.64562815833985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34640919-4	17.9711277264595	0	1.34385111001954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106971254-2	3.48060627507999	0	1.39042659498385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59538551-4	39.8304761902114	0	1.33879149067924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160234780-1	6.2627803499035	-1.97423645436852	0.718982134631061	-2.7458769269442	0.0060349398295178	0.141098191050649	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79543538924771	1.4068548238317
Merged-chr11-21082899-4	35.1440290872316	0	1.34603032251354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4505503-4	27.3459898112052	0	1.34065621573367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53325776-4	14.3379786513431	0	1.3469837128406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25295925-1	5.04477363077191	-3.03219016554745	1.2591769539262	-2.40807311164079	0.0160369690786759	0.27842657366584	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0
Merged-chr5-67822262-4	45.1471972390791	0	1.33782556522617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10383629-3	35.6272065711039	0	1.33911354292147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-85924551-1	2.53881266463058	0	1.42362312249894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88490463-4	28.5542703757442	0	1.33989705088998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31113745-4	33.5129970536493	0	1.34121034269253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146806038-4	34.3256221880066	0	1.33834202244799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80294893-4	18.4576545287463	0	1.35769329700469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32542942-4	41.469701129213	0	1.3363544571807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140594049-4	13.3020474262429	0	1.34088981015452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70720804-4	64.6863513895985	0	1.33906778372449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5238936-6	34.2816062065004	0	1.33436071020109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33892191-3	11.1724275933203	0	1.35183273011541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37431513-4	31.037649712812	0	1.35034647929415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114926989-8	164.994246615257	-1.26934270094671	0.19481089053533	-6.51576868961802	7.23183449879836e-11	2.80796636800129e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	7.52027343228181	6.24160040458376
Merged-chr4-32251233-8	117.372004326531	-0.203544436852168	0.196519359012006	-1.03574751045129	0.300319951117986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.7889229820959	6.5765109250655
Merged-chr1-34140222-2	4.26040672476118	0	1.48079628531342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90301080-4	19.6527602821731	0	1.3372806699885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50445213-4	15.8965654357015	0	1.34238525020887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62635134-1	1.6989638575884	0	1.52665132198509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-16007873-2	4.21716796833396	0	1.60380503914589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8132982-4	32.5144126626334	0	1.3358346097275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84437013-1	6.65848451334913	-2.47867601334441	0.845348630824111	-2.93213465186311	0.00336640753442307	0.0930796272450171	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57897499507585	1.30139522650344
Merged-chr17-48287046-4	16.9595111707904	0	1.3405459476073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30579279-8	78.8503849309199	0.15063704968867	0.191815494973747	0.785322633655259	0.432264428689215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78946365447866	6.91590929164511
Merged-chr8-39981510-1	4.34477958081806	-1.85309577842765	1.07584499725038	-1.72245610024098	0.0849869286644597	0.823054419253761	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02032251225296	1.28067447403188
Merged-chr3-87508438-8	54.3484961505984	-0.126743762430029	0.26148074305106	-0.484715474459547	0.627878188107569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30686235734825	6.15771295372773
Merged-chr5-123694667-4	29.7770297076628	0	1.3395680143667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77072539-1	2.46484239308443	0	1.70692490865626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113450121-4	38.0264884423379	0	1.33451590903398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47680509-4	13.5412506492521	0	1.34783903589608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121996992-4	28.9078511186816	0	1.34312640615459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85084355-4	23.0913567703069	-0.497355147158616	0.488091579281463	-1.01897915938396	0.308212860666063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56546887668083	3.05735158620052
Merged-chr3-149088683-4	20.679385078686	0	1.35626607435796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84701599-1	1.99332810875672	0	1.46071866465874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70942804-4	31.7931204714939	0	1.34875957420004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136941180-1	3.61343634872976	0	1.38665434278831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66410672-4	13.8329588889545	0	1.34296089585406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19627213-4	35.4271352447198	0	1.33406693941305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107012790-4	20.6488979614085	0	1.3522044280577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70966227-4	24.6779099668737	0	1.34245498912009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42328740-4	47.519770161449	0	1.34193795373794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-47976773-4	47.4243020202511	0	1.33495072332543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33282561-4	35.6365782008187	0	1.34185421829285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54956077-4	41.8565795114132	0	1.34384105170892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81983293-4	14.3194969531046	0	1.34219917890352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66998952-4	34.5555448303727	0	1.33482500289093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101538316-8	78.3068408559765	0.46575211872782	0.253262443022847	1.83900981593945	0.0659137423164122	0.706659538555077	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68462343479148	6.17771073653567
Merged-chr1-156437495-8	77.7990844993274	-0.231552118290754	0.210243694680798	-1.10135107091943	0.270743891805125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.3779323158674	6.15255460324322
Merged-chr4-53414182-4	28.3298900328861	0	1.34000022022712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152807769-4	36.3800560251568	0	1.34082135643396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95685333-4	19.7518667573162	0	1.33928291759242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50096666-4	52.1657951216776	0	1.33828836142911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24571824-2	3.53999522776381	0	1.45145615311189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95913280-1	2.91753559836776	-0.0310481473102302	1.98729899321409	-0.0156232894075066	0.987534925688981	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr2-68430812-4	28.3615178962313	0	1.34893708331009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66849903-2	6.30337427519834	0	1.43332691997451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19942387-4	24.3260895815655	0	1.34118199323546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32548135-4	16.273951844019	0	1.35099981765279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71037684-4	15.4649531251504	0	1.34169507309171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102877691-4	16.5080822092664	0	1.33885069823242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83727844-4	15.1469242441755	0	1.34238382203384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45497760-4	19.096935611382	0	1.35292528952951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7335840-2	9.52757861478914	0	1.46245286041698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106760186-4	18.4926742524146	0.35026264158492	0.419240780960305	0.835468917843859	0.403453740371646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11191744815634	4.4886916484882
Merged-chr15-27883045-4	20.3521242982484	0	1.33592217161783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152525126-4	20.7564536684465	0	1.33873817625332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83733282-4	16.3506548514055	0	1.34145833675878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39222748-4	26.5870980098862	0	1.34144207637839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25128693-4	37.381055446304	0	1.34800970895702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110706934-4	47.9370025144438	0	1.33879468818235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63895398-4	25.573810215793	0	1.3400680695585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102368191-4	27.5404251638099	0	1.33624503816115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66440148-4	13.2182070793037	0	1.34274378006453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27436776-2	4.60585403770596	0	1.45129810623583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39007372-4	19.4006468654182	0	1.33911529159821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-24865014-1	3.414867931926	0	1.42023272720935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8305907-1	2.15762629061468	0	1.49696001478034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115414293-4	17.0683086190102	0	1.34086597898146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135729874-1	2.90578321595681	0	1.48009104345574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6827415-4	29.2575590086414	0	1.33952110053681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122848199-4	37.8712403253112	0	1.33716313005332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79642920-4	17.1727533371193	0	1.3384365839447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51013244-4	10.8748186964596	0	1.35203927825086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-103941074-4	12.2858580919112	0	1.34434172772324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84402018-4	27.0841892102634	0	1.33543364097333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80774406-4	22.3767536324365	0	1.33847635249011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126746300-4	28.8703953481407	0	1.3416715905728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109011861-4	56.5892580390881	0	1.38814337127549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80319356-4	13.6985649975567	0	1.34672001041976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43790765-4	53.1237770838143	0	1.33866787094122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171957538-4	16.0895734370272	0	1.34078559524907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93231237-4	25.0365420905236	2.12521741513716	1.17023021410294	1.81606780403143	0.0693599717673692	0.728286402414994	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr7-123397549-4	20.6685665535356	0	1.3367223567238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106387034-1	4.09105677701804	0	1.4145156884587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34691242-4	33.6372947591627	0	1.34231316173395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52993434-4	18.4541726900823	0	1.33828529702319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31172951-4	30.6329587128145	0	1.33908667530364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55386968-2	7.44482669941896	0	1.362879694729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35995375-4	29.9428932306088	0	1.33354864239509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53451036-1	3.59824865015443	0	1.46008006956835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97824169-4	31.0318327388665	0	1.3454775978651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104334050-4	45.7680662986616	0	1.33361065605812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21081790-1	2.09590927037828	0	1.52883887522004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147060201-5	45.9486814219547	-3.53461146585556	0.368850175937046	-9.58278373292368	9.44638831519949e-22	3.66783016018521e-18	C57BL6J_F1_Control-BALBCJ_F1_Control	6.99087230459533	3.5631836273097
Merged-chr3-96300832-4	42.3248781259671	0	1.33409516473741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69260331-2	2.69200170195828	0	1.96531121999736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127604695-8	150.917246674229	0.000522920894211832	0.204872303984168	0.00255242355380668	0.997963462865083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.15793320210508	7.16887969856773
Merged-chr10-57690377-4	12.8056955995955	0	1.34967809656285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35165446-4	27.9576896541603	0	1.33419262489372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78624206-4	29.7582147647279	0	1.3377543640112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145241023-6	77.3376229828426	0	1.33452780594606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31931896-4	15.9809350032508	0	1.33809774959182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120166036-4	15.8288222580785	0	1.35080702421309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-129925002-8	78.5246013209778	-0.970068385300706	0.196429491048295	-4.93850684092135	7.87230173074589e-07	0.00010514261665396	C57BL6J_F1_Control-BALBCJ_F1_Control	7.17873669177246	6.16180901332947
Merged-chr18-54860828-2	6.33316048665547	0	1.38350313708986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-6624148-1	2.26902312493521	0	1.55004023129779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102094391-1	5.59669017993959	0	1.39099067814596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110381724-1	2.81607702799941	0	1.45872994085915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45643695-4	27.7930633576495	0	1.34515799879811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99464478-4	15.3384093325375	0	1.34123567674021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27618010-4	37.5293165247059	0	1.33520646049815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101742181-8	119.829005061785	0.215393893179737	0.150799675356861	1.42834454165778	0.153192713301617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.26749937485996	7.47497853607675
Merged-chr5-144283804-4	39.0977764418646	0	1.33539081121355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105377209-4	20.301168989837	0	1.34143594392671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97361163-4	27.5105885020279	0	1.33675066288419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96130891-4	24.3164965091576	0	1.3353480067349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86380629-2	5.36263839998906	0	1.5385460235349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101645581-4	9.52190443306158	0	1.35331730602463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63702003-4	36.3626542364278	0	1.33779925315388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124014950-4	32.653583583227	0	1.3344711927342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5103967-4	27.4391439116581	0	1.33814458148484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46932976-1	2.92096920384916	0	2.14605371546294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125105530-2	13.5080973445741	1.67547026061387	0.905349542786383	1.85063357458302	0.0642222861479007	0.695153176565857	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	2.30265208878694
Merged-chr8-56299599-4	23.2130938443168	0	1.33623320556215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40148530-4	35.6995745407051	0	1.34302469177295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184535781-4	26.9745223809723	0	1.33821279655299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32434303-4	15.5864554643608	0	1.35089833320206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118180444-4	12.7464180448629	0	1.34526704076615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112864996-4	35.7608111637049	0	1.34671878647062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102034336-4	21.3268993303106	0	1.33908443275753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138040752-1	3.34658796298086	-0.17739715352889	1.2558074672058	-0.14126142594422	0.887663421621521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50921536809972	1.70266130792036
Merged-chr3-95457925-4	13.1930545129731	-2.10806148121508	1.12408876663821	-1.87535143467328	0.0607443916924147	0.672232163682404	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0.376242425970964
Merged-chr7-63903856-4	14.2622591184393	0	1.34112382675312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49970578-5	32.3259166870996	0	1.3354377822813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75960012-2	2.80849820292834	0	1.51810643833179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37595361-8	60.8021295064629	0.0371128642029937	0.26943635064796	0.137742602710221	0.890443848197887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.36557636770033	6.47358114554515
Merged-chr7-110109280-4	40.4375865094507	0	1.33787850092039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13553807-2	2.71486265265735	0	1.53630171644966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140999476-4	34.7781236734621	0	1.33508494975113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73535028-1	1.91244310017682	0	1.54484605651042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53140499-4	42.4905180744185	0	1.3357093282895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42527106-4	35.3980013070348	0	1.33969885662574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113304787-1	1.98180775098278	0	1.49316433236488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142088998-4	21.2407841792884	0	1.33788083061667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34010398-4	23.7226230333371	0	1.34663366299139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61172904-4	57.8275217147553	0	1.33850167493936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130922131-4	13.9405571632973	0	1.3462363567161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148808176-2	5.03633101222455	0	1.42632798557991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87961032-4	16.2759366459995	0	1.34083971167361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50737772-4	20.9178400391416	0	1.34104066607707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85489431-4	23.1266340857869	0	1.33795869642981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66237839-1	1.726286442305	0	1.55985994721701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111438107-3	17.1355566996252	0	1.34174282091745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28591680-4	64.139086352679	0	1.34269845878816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54724353-4	16.2741697590898	0	1.34297492057745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17433323-2	3.62061476987643	0	1.42759489957567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31838284-7	45.9597170772958	0	1.33722617787853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46849979-4	17.8263064570197	0	1.34039644841658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74930513-4	14.7808179108074	1.53194769405	0.722233627030466	2.12112485034621	0.0339112972121888	0.458652631083437	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	3.0541548672202
Merged-chr2-167742700-4	27.6639258342824	0	1.34246451181019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111178707-4	24.8972210404407	0	1.33618517265466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53386422-4	10.7220384291394	0	1.35392899480577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31115093-4	26.7420610562032	0	1.34497437974144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16183237-4	27.0111228359231	0	1.33434005040361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166018955-4	9.40668115552493	0	1.35503607918025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49885484-2	3.75148598879363	0	1.39475320873331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32475195-4	29.8432076719944	0	1.34023697804002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94382216-4	25.8534359821368	0	1.33625160602522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129400526-2	7.44804616552436	0	1.35244058512247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43665119-4	23.1629836881147	0	1.35021883730285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130919410-4	23.9568032610361	0	1.34060763242604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142920922-4	51.7440575526877	0	1.33602120508021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12315427-1	2.26472672181815	0	1.46205266432903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51129834-4	15.003348596964	0	1.34161492856254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91839627-4	28.7823039956427	0	1.3399978588602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52198173-4	27.328051356525	0	1.33523840370577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55866023-4	15.1281543735499	0	1.33746142894756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36930977-4	28.0974856217441	0	1.34317606229344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6389089-4	54.0436504080103	0	1.34043299653041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33076354-1	2.16130010878277	0	1.51350272509465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59072081-4	18.5196646508677	0	1.34832844814969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52903769-2	5.26259688655551	0	1.44606317797724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-119921238-4	13.2084508016055	0	1.33909147404136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-22420811-2	3.48883733574297	0	1.43174038377519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67600132-4	12.7418724613892	0	1.34864050301859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38565096-4	16.2434323739655	0	1.34121827803366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30186687-2	4.52017291569041	0	1.42890646425316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39969243-4	15.0325887698385	0	1.34098520849382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154260626-1	2.33850776061751	0	1.47937581543376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54853216-4	14.3630454634156	0	1.34539503256813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84059441-4	30.4057363223561	0	1.33782633767702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75427705-1	1.8843465645871	0	1.55008565544357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66144058-4	14.5152380396496	0	1.34253592260998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31123076-4	18.7202572714715	0	1.33903200186315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57037319-4	28.1941745476741	0	1.33996102462981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73973730-4	10.4353364006331	0	1.34118552963929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68657135-4	15.0986062105253	0	1.34040179861822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95428390-4	12.9192085573311	0	1.34057067429776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66813580-4	16.1595968535675	0	1.3431639436875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114694150-4	18.8277259899754	0	1.34500343820333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47275180-4	25.2628152468111	0	1.34650131478324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80939423-4	30.0264816278579	0	1.34531951145244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43913419-4	14.6847978131012	0	1.33963967414366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76099845-1	2.18100079819866	0	1.53769528704638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140614231-1	2.34480836562471	0	1.49948571239352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13983870-4	38.5144194068221	0	1.34261591951589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131269852-8	68.2669858375299	0.0406406793041828	0.223966154038228	0.181459022139774	0.856007294750417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8977570770102	5.94582060120822
Merged-chr17-83395591-4	11.5184059138378	0	1.3516031689834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27209936-4	70.36220118015	0	1.33929518078006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118557101-2	7.63911704307228	0	1.3695523651759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101155102-2	13.6480159821226	0	1.39903766676649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180768577-4	17.8477238000597	0	1.34092340326931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43872057-8	65.347069452363	0.13311715273454	0.2362425114532	0.563476708386209	0.573110316003394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.1387079814771	6.24260859849087
Merged-chr11-52046968-4	10.6589622363932	0	1.34281240077429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91611399-4	34.3141013902525	0	1.33965883894529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113973259-1	2.04736091064117	0	1.49347005819923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145929785-4	11.1939754562389	0	1.34166982229665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99443644-4	19.0888914781617	0	1.34877238503011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60865339-4	12.101180411208	0	1.34390840575401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75466930-1	2.81569426760468	0	1.60346895259696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21078690-2	11.8357069505684	0	1.42965340194878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-98018332-4	34.3295839539057	0	1.33574655341811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-63112-1	6.38074565021184	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117305563-4	10.5899200208218	0	1.34487755688709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114843043-4	15.2212215207032	0	1.34504082948394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56774545-4	33.3095506429778	0	1.34669685312038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71500031-3	32.8579823794575	0	1.33805990869268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34619683-8	44.9160099507486	0.15592665527447	0.238689940074299	0.653260272410028	0.513588499460896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67483831605563	5.86692851565238
Merged-chrUn_JH584304-28841-1	2.76856801191052	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5367683-8	88.982827207238	-0.0753875128284575	0.180947376102329	-0.416626725694129	0.676951457872586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.71333947211285	6.64002050847754
Merged-chr18-24246122-5	65.6933529553645	0	1.33351790228454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91703494-4	18.8014467590798	0	1.34868212858004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-148903326-4	33.6065791056433	0	1.34060663663366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65113002-4	37.4900850396891	0	1.33863734824678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89455554-1	2.09790310215648	0	1.46403835608217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65514059-2	3.00856744344976	0	1.5241636436475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86399530-4	16.0840277770383	0	1.35107563610625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86466094-4	10.0264752801136	0	1.35981491103472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108994779-4	23.2575827535333	0	1.34486526936764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-143161813-2	17.802806408793	0	1.34746547221915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119425815-4	29.7154908414735	0	1.33549374714137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65090578-4	32.3828845774533	0	1.34024786217589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107553965-2	4.74513769815962	0	1.53230220996934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16202934-1	7.97734122960508	1.20052994805819	0.690954404175168	1.7374951817426	0.0822998037574736	0.807970928743454	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	3.40956020733294
Merged-chr2-167752997-4	23.1437549917972	0	1.34607282730521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103606798-2	4.33721409811873	0	1.40611839178594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41408569-4	34.9110030155362	0	1.3384082532414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105864314-2	5.34992450477513	0	1.53068064503883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14867185-4	12.9165543123789	0	1.34574200883225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86598729-2	3.70820774630948	0	1.57603924190032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121877760-1	2.472498769386	1.66460523431006	1.38819885468044	1.19911151683903	0.230484586492377	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr9-65545806-4	53.8341741138096	0	1.33761661496921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44053609-4	36.2900011562832	0	1.33617412866212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118465146-4	14.8990458704835	0	1.35396868441504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41612414-4	78.4067670303625	0	1.34071137164727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172402645-1	1.73112867243897	0	1.59701083532478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12294296-4	16.4659028766089	0	1.34372026826643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101548967-4	28.1841567082123	0	1.33726608528322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84114138-4	10.9430490451534	0	1.34671794199095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121330248-2	10.6027254842008	0	1.3761933529748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55142081-4	15.1517591772199	0	1.348716252246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25193628-4	18.0528314395388	0	1.33695972693971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-139550657-4	9.81932578298593	0	1.34430024134338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42374186-1	4.78372580940348	0	1.47708105695116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-121024123-4	22.3952462606055	1.7368883359513	1.2293976276346	1.41279623199951	0.15771564648919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr1-39762194-4	19.6175444679577	0	1.34600863136561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90745555-4	23.3540476620392	-0.654416365752228	0.709197885117826	-0.922755664511751	0.356134550126931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42775089836225	1.97656658922368
Merged-chr6-17737448-1	2.2597241163814	0	1.52158081504003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137991356-4	11.9202847632854	0	1.34520817128888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52523361-6	47.6148034583188	0	1.33478242175268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126412775-4	18.1919225464279	0	1.34821913024285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31109301-4	16.9379602859288	0	1.34300609771465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66877975-2	2.9142882349994	0	1.66033839755997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10838650-4	32.452551088777	0	1.33617004608658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75293442-4	48.2970067875884	0	1.33773903550439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114268916-4	15.2482461551461	0	1.34928507441181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30476367-1	1.81142440467212	0	1.6135184125886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101523753-4	20.5803274434541	0	1.3382984420549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45276678-4	18.740715227732	0	1.35357738893286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100116230-4	60.9221949935769	0	1.33848443720273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48716414-4	14.1940898026609	0	1.34157190805756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22119747-4	27.4901546621529	0	1.33716179879469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101954332-4	29.9932437509717	0	1.33721997393682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58999141-4	23.3313262677398	0	1.35068097804323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37230823-2	4.79796700300352	0	1.41624323641844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28900903-1	2.38070353278255	0	2.35828784235854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5649018-1	1.72539562255163	0	1.58080157936201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58802507-4	9.92107820521778	0	1.35366823353926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120155056-4	55.8691425685772	0	1.33646033050567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-71832368-3	26.3323572069909	-2.75125778909386	0.479221954844706	-5.74109295552917	9.40674344484795e-09	2.20405675395901e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74536423313658	3.10687892707957
Merged-chr2-70885872-4	27.0778064724128	0	1.34108278375325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10041063-8	90.7698998466321	-0.044696690541331	0.250100946831274	-0.178714599475246	0.858161805019182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60367608499842	5.57626991108966
Merged-chr12-99641532-4	17.0589217061666	0	1.34503614549149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70476938-4	16.5652250201449	0	1.34427538763338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126415905-2	3.53285552616718	0	2.08579212983571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102987103-4	24.7533934556006	0	1.34791303108839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53474326-4	16.294331596318	0	1.35745744083714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38950517-4	15.9960912669556	0	1.34790820431945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108564227-1	5.6575223095434	0	1.37480689386777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132959644-4	33.2420693470238	0	1.33990971081966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59129198-4	22.0780452843272	0	1.33611355977138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63079091-4	26.1270310026734	0	1.34144424809007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63045984-4	20.2794650177774	0	1.33403315555538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27740360-4	91.3086914791203	0	1.34620339180901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81831621-4	19.9766917248642	0	1.34324515691721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36074726-4	22.7552605153027	0	1.34023647154113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21637542-4	45.2773852945215	0	1.34543746869307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29827437-4	14.1237444211747	0	1.338065041333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38829586-2	4.05785665735979	0	1.62232098078787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117268196-4	12.9882603893569	0	1.34029105560171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-35693199-4	15.9135742537944	0	1.33712822262024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130646964-4	18.0923131283972	0	1.33727594261703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38491663-2	4.73435308386496	0	1.46844925741534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83494037-1	2.10259063421603	0	1.49902772169202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84179546-4	75.1078814866339	0	1.34218969583583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57921563-5	32.9192430447053	0	1.33659422807131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32190392-4	34.4887440158182	0	1.34063374712276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80839876-4	16.94878192051	0	1.3470773044949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127080226-8	95.1901473800571	0.817831812308077	0.226369498540825	3.61281805888077	0.000302887235381511	0.014726875874869	C57BL6J_F1_Control-BALBCJ_F1_Control	6.89190154146849	7.79557778411486
Merged-chr6-124901265-4	71.9749009619026	0	1.33724016272571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160236998-4	16.3308768484829	0	1.34542437975545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114292749-4	21.2325119655493	0	1.34088291780956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82534573-4	12.6145926972895	0	1.33957735409065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21223766-4	26.0486180377002	0	1.33350076055982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37482832-4	38.6008518196805	0	1.33281778515814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27675311-4	25.5056421613147	0	1.33703148139023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19869709-4	19.3187783945999	0	1.34468311109496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131015586-4	25.4643389300414	0	1.34404619101151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142393261-8	66.9429302368463	0.707392639154385	0.226515327161279	3.12293498201435	0.00179057298489008	0.0570872474402579	C57BL6J_F1_Control-BALBCJ_F1_Control	5.30423976761624	6.02106430862706
Merged-chr1-74227514-4	33.0755716029674	0	1.33760758312985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86169249-4	18.8514576927604	0	1.35828379813914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16521535-2	3.83893762442014	0	1.53643421637282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36715972-4	25.3718110411501	0	1.34027236020268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40457299-2	3.99852804426104	0	1.41851920275059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116529984-4	17.1006885921697	0	1.34677484312458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105012710-4	17.0628466020546	0	1.33651964906588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55911559-8	123.867428511117	0.28649580378915	0.194657061093739	1.4717976434011	0.141075530190691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78405851721409	7.06854896429783
Merged-chr11-3133980-1	6.85949547449567	0	1.38353493683034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28523944-2	5.73752274516102	0	1.40347801640432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128731608-4	25.5954914719178	0	1.34240905367209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62130573-4	23.1803844466159	0	1.34481841506968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75834393-3	32.7271124792204	0	1.33666254332267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67350575-4	49.282918714012	0	1.3386321036756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65302709-1	2.14533456450813	0	1.62880129156141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65352899-1	3.12335134303656	0	1.45188831567806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160214759-4	45.3797873030479	0	1.33717066124785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180404426-4	31.7678173715766	0	1.33900055666083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55627291-3	12.6716753823936	0	1.36943654725007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62356454-1	1.83875863772538	0	1.71852326568535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-133869893-4	22.8184364651305	0	1.33621627252159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113640686-2	3.09402076518153	0	1.54516000870407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19915489-4	16.0384781266357	0	1.34100480344496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6456436-4	21.5081402387392	0	1.33882934912456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129033268-4	34.6533865401127	0	1.34832212458759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80209924-4	21.2163868789968	-0.212202354652674	0.533547496702931	-0.397719708112181	0.690836808344977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71437385196455	3.01367625810187
Merged-chr15-25634320-4	20.5527601529759	0	1.3463845458394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7567560-4	50.2336259984242	0	1.33723223010375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29397064-4	11.8844105132171	0	1.34116092302725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8709782-4	22.0051566266904	0	1.34184373652969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21064665-1	2.59334373786449	0	1.49445720433571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68181343-2	4.76760641781643	0	1.40230007771334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100529390-4	14.317678082285	0	1.34552222149962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126806014-4	40.1176557982506	0	1.34540698935078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27491201-1	17.030722760913	0	1.34235162306374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29247300-4	25.6955291615963	0	1.34716047619078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136120900-1	5.34627896589998	0.543382524685855	0.98781424803051	0.550085732990027	0.582260571758917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20548244127239	3.49560003008138
Merged-chr14-75170550-2	5.44040186672949	0	1.41211907234564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26401225-3	16.9841840566615	-2.1636299082727	0.90504640083477	-2.39062870840332	0.0168195526447935	0.287264806584189	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66011170258253	0.577068348605183
Merged-chr3-18641898-4	15.9161530885964	0	1.35432382371477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81136779-4	63.280998002043	0	1.33516491306651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11232627-2	4.63687083679754	0	1.41413821158612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74295698-4	53.3491566753114	0	1.34707157660871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48698225-1	1.59210504802162	0	1.55883287294777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71234137-2	5.71223140062435	0	1.45094981049163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40230537-4	17.9821609820878	0	1.35821509436464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53404484-1	4.3750142380137	0	1.43856687905298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75188060-2	6.29745435241402	0	1.43260144034732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52976871-2	4.88450068240906	0	1.44420060769455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33168890-1	3.24063375466202	0	1.40484451383402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21432613-2	10.2299352775306	0.991790542734358	0.724777584113281	1.3684067560502	0.17118479067921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	1.81828307388421
Merged-chr1-24699530-4	32.6559021025989	0	1.34337058074214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92988772-2	11.6395964295637	0	1.35914802598763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-136309024-4	31.0295076395124	0	1.33366356605514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35838542-4	20.0242988559806	0	1.34225673037415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55754538-4	53.3204508397878	0	1.33807411893899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97435282-4	47.3304035851253	0	1.33951355994304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107003445-2	4.0827114999803	0	1.40425289155555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149173841-4	25.7841633955969	0	1.3365996717338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165615003-4	21.3359497288465	0	1.34187364281876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107084728-4	13.1754357012284	0	1.34384384947549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77483876-4	41.9131359948233	0	1.3319363370378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80789940-1	2.40603466395553	0	1.50167255417732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80267120-4	17.5115920296962	0	1.34278124812741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131555328-4	11.1470995563766	0	1.34426519162136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34472722-4	19.4361328318811	0	1.33767008435241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144301160-5	34.8383284150152	0	1.34645640331288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85534923-1	2.38081565571601	0	2.21265781573316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7841937-4	37.5737873285098	0	1.3342429403948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141656344-8	69.1116554348108	0.333192182023133	0.196056038424545	1.69947421513042	0.0892298688891958	0.846943677832686	C57BL6J_F1_Control-BALBCJ_F1_Control	6.28874540134937	6.62561191039851
Merged-chr1-127976723-4	20.2357613561778	0	1.34651898767705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5865505-2	5.47913644418155	0	1.36995129143485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74944273-4	21.060779684918	0	1.33752373892352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23997065-4	28.8661168175137	0	1.3350775108873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112811830-6	42.7089723760842	-0.590959402222733	0.552317365209729	-1.0699634656577	0.284635753866734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8260450382345	2.34848986699305
Merged-chr2-160276151-4	26.9558792151237	0	1.33831936233176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74815954-1	2.88976048901015	0.610716689246695	1.50333686962357	0.4062407445642	0.684565719227938	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr1-43466115-4	11.9598891122426	0	1.35210138408224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34513360-1	3.27822989574557	0	1.51059019594383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23823428-4	30.4920767834425	0	1.33850189021485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92082899-4	31.653843480865	0	1.33629104017762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118999822-4	29.8872793483572	0	1.34144173479125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-71369648-4	26.7182606100079	0	1.34665625805995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65165191-4	17.0175690909915	0	1.34584355814108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20231373-4	25.8087698173242	0	1.33878593024506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35066131-4	14.1844510873205	0	1.35489633891283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77423085-4	47.9918630896668	0	1.33309781802345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66514511-4	16.3943393798194	0	1.3477572945236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89256740-4	25.8767486589037	0	1.34196073299262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102617549-2	4.92292231271331	0	1.43348482622826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89257077-4	22.7500350490577	0	1.34095265851372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58476562-4	31.0640570096116	0	1.33638762943551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158175183-4	22.5865032869511	0	1.34694734098549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56265977-2	7.62397714366068	0	1.39915401144795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96489219-1	3.71274563938997	0	1.45579771000623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24465498-1	2.0893639996615	0	1.54030467376752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9932317-2	4.14873500605343	0	1.45384612737164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66928337-4	27.9654112008645	0	1.33801071502305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35888370-4	22.1656516812255	0	1.33728269582682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32972722-4	20.0704510952378	-0.440426971903787	0.78598924471271	-0.560347326463442	0.575242552285731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9272926343824	1.30139522650344
Merged-chr7-90370472-4	29.2306307838192	0	1.337473978652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33922474-3	36.4724026924447	0	1.34108236588882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83682132-2	5.68329673860473	0	1.42433306954876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111119412-4	13.0168352708793	0	1.34739197110122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59263176-4	19.3300783102227	0	1.33653589175506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55866406-4	11.8312013939778	0	1.35169581075647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52950390-4	14.8980345080589	0	1.34999708963132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17418330-4	23.6266107564935	0	1.33735200132719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-127250125-4	11.5889281720699	0	1.35111213281275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18971764-4	11.8696804097226	0	1.3525993507649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119326986-4	21.0473517071833	0	1.34778118434079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27042962-4	12.3522740737711	0	1.33959194584797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12573824-4	24.6610003226881	0	1.33933546692804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126844774-4	26.7053695776665	0	1.35232262576688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-10871819-4	16.6923569563804	0	1.34022753540775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4908114-4	26.5594259033291	0	1.33451607236227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101984421-4	32.8980338500061	0	1.33681933326275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14117205-4	16.1309331525006	2.42709463084823	1.14133592702193	2.12653836034165	0.0334584587123693	0.454351325792077	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14143228603163
Merged-chr11-6299685-4	29.3832866509422	0	1.34011774401405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28386635-4	22.9528357749618	0	1.34059946021951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59831244-4	31.2238858741425	0	1.34548380670544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55116145-4	17.2065203524462	0	1.34180472584278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82016272-1	10.9000672896103	0	1.3737231991559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17035135-2	6.07647214538119	0	1.48772813389605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27349510-4	16.8656669116009	0	1.34165312323375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73937239-4	30.5117379102907	0	1.33828197667406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104281157-4	28.1934328746101	0	1.3352036877039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99172256-4	24.8741755785693	0	1.35534598123691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35279444-1	2.7022561890403	0	1.60236103022397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77435165-4	50.9906820306935	0	1.33780714374213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-109904368-4	13.4726212754575	-0.973182176535065	0.974744649596496	-0.998397043715933	0.318086866585743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.724326877898254
Merged-chr11-9404206-1	4.17942710006161	-0.971468444757769	1.02318972573153	-0.949450937912044	0.342391313769037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88513399620689	1.81350735141944
Merged-chr10-91300287-4	18.7222367969541	0	1.34048178475787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13650858-1	3.5915596757838	0.523332185796097	1.24150012022413	0.421532126554782	0.673366556893756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.723581231604105
Merged-chr2-26475238-4	16.5727369312766	0	1.34471639179228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102988802-4	17.703903120302	0	1.34817762373218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7430527-4	25.7131914917671	0	1.35339504478668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37322966-2	5.55712302131305	0	1.39127654574326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102382422-4	24.0648453796265	0	1.36371234591237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48532896-4	18.621370745013	0	1.34168032878702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99393070-4	23.5177473888318	0	1.33638052618434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21046425-4	26.2182816869685	0	1.34208566668126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146933329-1	2.73466755338767	0	1.41111637697746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126438042-4	23.3831932735514	0	1.35437332061947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23279965-4	26.1415305748935	0	1.33776015562661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83885307-4	69.1552923828721	0	1.34026184633148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44422339-6	42.850969856961	0	1.34997415392315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119863614-4	35.8223267049449	0	1.33506831899369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-81437665-4	19.9851999987075	0	1.35721543311826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79419989-1	4.22277723459585	-0.639296343669465	1.04757398687571	-0.610263667940156	0.541687160228376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	1.39949824061849
Merged-chrX-140520373-4	38.1744371130581	0	1.33793793380251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25780803-4	19.4801879092407	0	1.34208007453584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68058863-4	15.6411391235177	0	1.35301031887066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76527536-7	41.2151400282869	0	1.3377225415715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132804626-4	31.3994499049483	0	1.33783959163299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71807492-4	10.8029420883274	0	1.35673131760086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4942701-1	3.77869665233384	0	1.42649327471496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-26243277-2	6.10785025334051	0	1.37927444969252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32668197-4	13.8719446485831	0	1.34375322903369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34464781-4	24.3005178811418	0	1.33770277911284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32718097-4	16.6836811425129	0	1.35422377250455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46687247-2	7.821235720825	0	1.35197806011054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15156923-4	29.2564929348898	0	1.34016933804175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6778422-5	39.4159905011773	0	1.33372453336541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90617283-1	2.42320640279722	0	2.31835025431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116620573-4	19.3113153102057	0	1.33777706519467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9760200-4	57.8067329169146	0	1.33337977279591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93877838-4	18.6933228053123	0	1.34137189501935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68557096-4	15.2692652979166	0	1.34914372546614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138288920-4	17.8385363852037	0	1.34235045705831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34821626-4	15.7524529746008	0	1.33856724674542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96058466-2	2.75836834722971	0	1.49238791126593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107481655-4	11.4928560826699	0	1.34318273530481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-37597533-4	22.7246648852559	0	1.33548721483105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168170390-4	45.5304292919617	0	1.33603245383527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100163339-4	40.7027030121955	0	1.33608403652268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24626379-4	23.767848140893	0	1.34727619820535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84032901-1	1.36808598908224	0	2.00115843260051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27714345-4	23.5833250089435	0	1.33726352237236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102068840-2	6.55929165064029	0	1.44890730479002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86198780-1	0.899117834409051	0	2.39572973139046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103010702-1	3.74501554181345	0.965434909342245	1.08125550025772	0.892883235379732	0.371919705790117	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.76415777129835
Merged-chr3-144677643-8	92.2406890484343	-0.328918256822286	0.180692117439727	-1.82032432561428	0.0687096290386575	0.724385518981224	C57BL6J_F1_Control-BALBCJ_F1_Control	7.11926995506686	6.76936083559683
Merged-chr2-117027302-4	21.3146871998197	0	1.34219414952746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66873538-4	12.0553273745264	0	1.33946749852476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113704120-2	4.29675745658318	0	1.43646085796453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167326346-4	17.4504634386065	0	1.34666853932337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22880149-2	2.94228209508388	0	1.4820023682668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90019763-4	42.3488929385245	0	1.34094484249498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127425105-1	1.49795108694604	0	1.53254317417255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45752943-4	25.2944568416908	0	1.34415644173216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36214253-4	13.0118208880293	0	1.34134159239698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43273679-4	28.1765715185479	0	1.34170716616409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184478189-4	33.1543431709498	0	1.33647872028798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5591761-4	62.0634700519527	0	1.34706699185658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33985562-4	13.0212769677266	0	1.34367901039851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43346288-2	3.42143577388099	0	1.49863912986021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57337240-1	12.4970315370984	0	1.35086294165116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91779197-4	31.6602165611411	0	1.33703981553259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49242919-4	16.9910607096791	0	1.34397954838742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101389542-2	5.4686227798004	0	1.43506424997281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191201355-4	31.7352479026712	0	1.33739584927987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70755430-1	4.05579609944472	0	1.40708964940503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36697823-1	2.34666400424345	0	1.47617136793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73067536-8	146.681625712375	-0.0478109893343329	0.27958987182617	-0.171004010345763	0.864220612245518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39494145997891	5.28787243820956
Merged-chr6-97866762-4	25.5238343437226	0	1.3395294553518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167058446-4	17.4406344786306	0	1.34362286027465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51920589-4	26.033127858461	0	1.33573246093394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78457989-4	30.3778281577976	0	1.33521318838319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104232177-4	13.5707074809601	0	1.34338708821272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27924183-2	10.4612455206737	0	1.35507243245349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119716015-1	3.12858520855943	0	1.41436868279185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-74990173-2	8.30221297449943	0.644208298130709	0.766675151481248	0.840262393904475	0.400761281720689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34557707159302	2.01473438434858
Merged-chr12-16881946-8	96.3378500370886	0.290595343622886	0.200976258699764	1.44591876425067	0.148199988236635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.02127804669318	7.32130746577249
Merged-chr14-45239197-4	14.2618395470469	0	1.34100034584564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32375358-1	2.31860335737512	0	1.58370281248869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40555194-4	20.7789232854671	0	1.34350717992201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135472605-4	36.1696232895862	0	1.33550209361847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32486930-2	3.80798967585113	0	1.38555667826358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57760933-4	25.3358119130277	0	1.33524171935284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69560127-4	49.3789438681293	0	1.33519222998956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4368415-4	12.6654527409	0	1.36403744877351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35130523-2	24.7553930301489	0	1.3475704562563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38710624-4	32.9858410481667	0	1.33519052401968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21515494-4	19.2074404166182	0	1.35191578763429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129049241-4	20.0043592752683	0	1.34233122846232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55453835-4	31.1262313628253	0	1.34424644744227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113634076-4	33.307897142431	0	1.33483771328341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45316349-2	4.02153186041813	0	1.44432960877468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-30510168-1	1.78696066458406	0	1.76403178162047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46508379-1	3.87734926747717	0	1.4152950960337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17731967-2	4.56035503195137	0	1.41637820789374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34918653-4	30.1848744114167	0	1.34635041018149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107919782-4	15.5097185824376	0	1.35570836932055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-112330467-1	8.10727375784377	-2.60703689234904	1.21292672570456	-2.14937707043654	0.0316045215701626	0.438151029847607	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	0
Merged-chr1-88705955-4	19.8572208794613	0	1.33967593273223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102810163-4	15.9128883501813	0	1.34600909704599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50993495-1	11.3950218539419	0	1.34074755448967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-80311292-4	26.9793600186454	0	1.34086132291503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123654940-2	2.89654817936133	0	1.48662275050212	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103758658-4	23.1637495158243	0	1.34099604008488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99303080-1	2.45447285829375	0	1.54541860932403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70163986-1	1.78055087213994	0	1.57426215461998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43664198-4	16.160819953482	0	1.3382535829486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44659690-4	40.1674651087695	0	1.34414859302343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11192479-4	17.763376839833	0	1.33818803092376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83314585-6	39.1324204537548	0.596162601858335	0.633695819093521	0.9407709249386	0.346822263729705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	2.36364322001306
Merged-chr4-150799646-4	27.5557095310909	0	1.33440361437068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119824984-4	23.469274435394	0	1.36451028441065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63925499-4	23.054696342048	0	1.34972396084624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6273597-8	57.0751988754408	0.283178697423259	0.224132632931861	1.26344251490299	0.206430193290982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82192272035096	6.17419239876819
Merged-chr12-85486093-4	65.1273561045272	0	1.34378303150473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89383761-1	7.14304845245598	0.976676306857626	0.889451215507866	1.09806618938618	0.272175587860557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.55926189265627
Merged-chr10-70201063-4	22.9591778348102	0	1.3373435142812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63422095-4	13.069784712292	0	1.34617495047856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3161384-3	19.6482343573581	0	1.34473688839446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167815287-4	42.6081655695629	0	1.33572534368037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165604404-4	12.9179684402148	0	1.34621916040244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143918560-4	21.7034332622467	0	1.33661611428496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60749164-2	3.87845791003546	0	1.50490687737762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42639745-4	18.5616160334169	0	1.33842386735825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99163716-4	32.4888333553161	0	1.34279447843744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46993398-1	5.98361809615711	0.18160248620899	0.675931076581542	0.268670124071567	0.788183544233676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91790730682473	3.09564699470957
Merged-chr10-99179815-4	55.5421287016893	0	1.33650297902096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64293772-2	4.86070278808138	0	1.44632012630972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4453171-3	49.6185140728676	0	1.34505603280923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12754464-2	15.8525998325467	0	1.35056009096561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8010063-4	38.1409703839447	0	1.33976523691955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47178004-4	31.7319794941424	0	1.33644229539774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11763554-4	51.3746967489539	0	1.33227421984656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25107266-4	24.4278346712753	0	1.34044879131349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57181386-4	47.8477388169773	0	1.33844647584856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10496183-4	17.6846200133935	0	1.33951996934587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80157422-2	5.50752985741955	0	1.43456201904718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81522234-4	20.1772183459813	0	1.3417487841751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21808328-1	4.86359366708431	0	1.3822130321665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98668445-1	1.73820806484043	0	1.60336057844381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64327683-4	25.987286314529	0	1.33957443926911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81358616-1	2.30074812372868	0	1.48679239133402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53794991-3	43.9701830930721	0	1.34257495850196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25504312-4	38.5460975389799	0	1.33247298545216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66898054-1	2.76615191319838	0	1.4194144144786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66225143-4	16.5484759092432	0	1.34951419255978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58262257-4	28.5550486828729	0	1.3401602627531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106428223-4	19.1503213599	0	1.34386724472174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47330862-4	18.1634834250876	0	1.34751863080894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42396229-4	22.6592999827195	0	1.3442056388936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15471352-1	2.21090421845938	0	1.60005726209553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13012819-1	4.21914499204271	0	1.45552102403036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81571744-4	43.8141956373266	0	1.33653974459526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166696797-4	21.4500996992677	0	1.34836953871204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31406288-3	7.54726416328672	0	1.36285873141334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97965087-5	29.7707212215998	0	1.33664643074636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38866013-4	12.416197715584	0	1.35306553503131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170205496-1	6.12035899521292	2.18548353011411	1.03913940356429	2.10316683461123	0.0354511883102284	0.472094842076362	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	1.62805269464997
Merged-chr10-75282849-4	26.5492788063915	0	1.34076546517928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38248816-2	2.90635469069847	0	1.41276941651712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-130457422-2	3.71205817683723	0	1.48420784375917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66611845-4	12.1248848076071	0	1.35138677391405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13940671-4	18.4126103928595	0	1.35631243347771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59396017-1	3.97124669189285	0	1.40301105495592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183350010-4	13.090845474838	0	1.34621927154423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-90975179-4	47.6353602611521	0	1.33867456791491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38011533-9	95.6325960892464	-0.55009455502596	0.190129822127364	-2.89325761140966	0.00381268443950594	0.101495452226789	C57BL6J_F1_Control-BALBCJ_F1_Control	6.74516574223313	6.18936630495054
Merged-chr3-96278178-4	14.4146072986838	0	1.34401978713432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36162880-4	24.7154026405074	0	1.33702377854798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105864634-2	3.14051494372643	0	1.59880130523328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3356061-4	24.4910380332585	0	1.35662986679163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102688380-4	31.047552473294	0	1.33634509505921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135912047-4	22.6795132731273	0	1.33712136271353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24104194-4	38.134935008133	0	1.33790804709189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118674407-8	213.104345203262	0.38597579126478	0.166169164923538	2.32278829494259	0.0201905281911228	0.322425652744196	C57BL6J_F1_Control-BALBCJ_F1_Control	8.08289149001936	8.46842461025921
Merged-chr13-9882483-4	16.4405027976145	0	1.33787056260882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117252885-4	42.5962146156167	0	1.33246430175663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69134427-4	38.8933574926703	0	1.33730536823654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114684765-4	33.6511578008596	0	1.34061993037775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57331145-4	14.7834706764847	0	1.35314568712248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-39848721-2	73.4520418896767	0	1.3505767049202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr19-32179736-4	29.1972370978955	0	1.35427961032696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100994450-4	15.0865184932635	0	1.34223576684183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136142577-2	13.9950916440348	0	1.36930462669838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51895023-2	3.88794864609191	0	1.48338734634709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54918405-2	8.48842729696661	0	1.36073775535341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13423730-2	9.55165649201402	-1.84125974749304	1.21720636668291	-1.51269316189233	0.130357617348237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.376242425970964
Merged-chr3-121570895-4	50.266367198415	0	1.34130636698691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25485699-4	33.8945374259205	0	1.33415418782906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98506450-4	26.1750365404162	0	1.33514483197127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108881128-4	17.0479391688766	0	1.33973395961015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72487192-3	8.37176401344951	0	1.35316908585795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94724318-6	32.6796791498942	0	1.33804325789887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4195796-4	75.3874566825151	0	1.33905379305168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3141913-3	23.3351098643796	0	1.34985455008477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129528537-4	20.2169091345551	0	1.33651494531032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44976575-4	21.8069520246577	0	1.33688494356645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128722394-4	22.7130643927237	0	1.34249456636573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16214522-2	4.23258665822479	0	1.5048003824287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73169529-2	6.81092649763757	0	1.36331396057141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45049842-4	35.1040571060222	0	1.33505055849319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98816176-6	35.5225854870589	0	1.3331671518569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39418575-4	21.3172440459823	0	1.35139633082675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88132932-7	76.5478925906024	0	1.33330691926438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-13721371-1	2.73771477755208	0	1.46867364632951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21913239-8	125.961309101922	-0.43889340803467	0.189425492553744	-2.31697118543929	0.0205053014572154	0.326001781177446	C57BL6J_F1_Control-BALBCJ_F1_Control	7.18197518865285	6.74726850457234
Merged-chr13-43864664-4	50.364345252762	0	1.34085263161362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98283685-4	22.8030173531511	0	1.33750260263125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100626835-8	79.1871396975327	0.343296056245526	0.220128741587633	1.55952400295197	0.118872408006167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.7690818140749	6.14439959470232
Merged-chr5-139479303-4	18.5071076180915	0	1.35385238075923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17176865-4	18.2523786527096	-0.967610064363313	1.00317870946744	-0.964544059031107	0.334773230279704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0.723581231604105
Merged-chr13-100848869-4	10.8543849450551	0	1.34496821825952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81719912-4	25.5625996847101	0	1.33418546070757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-57732067-4	13.8782484691554	0	1.34030574226874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11014690-4	23.2778615885171	0	1.33906222692504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14531278-4	20.133656981805	0	1.33827494428416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70057150-4	79.3504772125144	0	1.34133466924854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61349903-4	51.8852272783945	0	1.33944437137482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31569342-4	29.7498642462563	0	1.34303479832832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182528129-4	32.0435289908373	0	1.34417394732956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47226018-1	3.72079006709127	0	1.37900628565086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98709270-4	31.6522986315998	0	1.33327493095404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-18361995-2	3.19141293179254	0	2.36260139037973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-40131-1	7.46682155276323	0	1.3841886409147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44274668-4	50.0083235424458	0	1.33668558624555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64075863-4	61.7448010828594	0	1.33630177734339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-109443231-2	3.88294771712525	0	1.46444446702701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80943148-4	10.2498560456382	0	1.36277917456331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45653179-4	13.6372378624605	0	1.34115328005766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4169534-4	51.3300120072279	0	1.33984083183455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135582616-4	21.3317502187294	0	1.33958403948461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8862449-4	14.7295997521674	0	1.34804801463203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97991661-4	14.3053698178467	0	1.34477390815119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101972953-4	14.2697394088571	0	1.34390757285866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19168354-2	4.72963784413373	0	1.47631209188687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160146971-2	3.15172429435424	0	1.41247799604399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150921820-4	29.1597132451515	0	1.33528790524183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43500324-4	13.584721967388	0	1.34728086675404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119857999-4	17.3169389109969	0	1.33913546806078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129574689-4	34.5017387712173	0	1.33448335185611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90293047-4	84.2115271905198	0	1.33874580757104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114818505-4	32.0110235663957	0	1.33771500960253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35597281-8	69.820853035779	-0.232838740725782	0.226461982383068	-1.02815818476731	0.303875424479403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.44101839265912	6.15849138130865
Merged-chr9-25244127-1	2.8903147689448	0	1.53193611893556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108876200-4	7.77651184026419	0	1.371082681273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25510832-4	51.9784829090454	0	1.3367445356881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99380380-4	68.5075413511565	0	1.33744267435028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83315559-4	32.8919060635242	0	1.33797028625964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166788166-4	29.6431079539962	0	1.33907414998074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90233502-4	27.8816331686921	0	1.34537003916397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105803557-1	2.32829438833854	-1.2848457022823	1.48615792145231	-0.864541838882584	0.387290306943668	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0
Merged-chr1-179434914-3	15.3211410982027	0	1.3372576304972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91668706-4	43.9940899392405	0	1.33567765806014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45749673-1	2.0636507610032	0	1.46749335338949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103481761-4	26.8458192240182	0	1.33567217630447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22699607-4	13.0195963677005	0	1.34602478205973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114648812-4	14.9469115176142	0	1.34559272107234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70066151-4	95.9902134890809	0	1.34206470819288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16965826-4	13.870190316561	0	1.34180755302086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34031566-4	64.2728371031147	0	1.33723323990433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117091975-4	11.1472379567817	0	1.34503415293071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70622211-1	2.86215281857182	0	1.44824875833193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35813837-4	35.2430039548852	0	1.33379657042666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6471268-1	2.00346184577263	0	1.61074370694469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151118721-4	12.9661345492099	0	1.35032056052066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-47918297-4	26.9686469407176	0	1.33893843546818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9424684-3	9.64193873686002	0	1.3599243752565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57455812-4	17.3130391446943	0	1.34481657012625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-118793099-1	3.50140071801176	-0.733986110710073	1.02760190310829	-0.714270875219197	0.475059698070857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21565186750098	1.7793972549831
Merged-chr19-21461805-1	2.97286991717799	0	1.40450686096021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72260823-4	67.1732470446701	0	1.33809633536504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121317121-4	24.878352592117	0	1.33622678031243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69332277-2	7.71499053285601	-0.0347528577397812	1.27553697249677	-0.0272456686784666	0.978263790873168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr3-25710151-1	2.84570948880568	0	1.41692832511862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32309581-4	22.2888450255481	0	1.34834600070372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99487154-4	11.6342851033698	0	1.34027836414994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11343514-4	40.3147462217164	0	1.33479738958562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77836930-8	83.4077296196149	0.575926843753074	0.188910954048857	3.04866833505127	0.00229858094597373	0.0694158675789923	C57BL6J_F1_Control-BALBCJ_F1_Control	6.47714339878445	7.05895498742762
Merged-chr17-81580609-4	14.7722798012363	0	1.35000318667382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46336520-4	27.3275519456749	0	1.3370363099101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105027896-4	21.6865114387847	0	1.33872244320825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124037928-4	28.1390872967704	0	1.34202797862314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160211895-4	10.8384283369877	0	1.3679134921179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6378984-4	28.1360736150072	0	1.33553470268437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156680877-8	157.515348058724	-1.17316011890039	0.156705328997487	-7.48640857592792	7.07838110552414e-14	5.91959566946441e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	8.2727738874899	7.06350840492351
Merged-chr15-85634721-13	250.551378086766	0.284945902026614	0.195866865544916	1.45479380207507	0.145726354563684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.30054910030866	7.58824710344799
Merged-chr15-66092322-4	21.0292453014064	0	1.34281392379679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8276844-1	6.3994191262327	-0.64312348383478	0.780121478780341	-0.824388894970887	0.409718622702584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46189523840421	2.86228010699883
Merged-chr7-75823325-1	2.98125483349624	0	1.40981456912005	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127351877-4	28.0275859796322	0	1.35098381311329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66795467-2	7.10262873684072	0	1.39714759419539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13538789-4	15.6873158126558	0	1.35164494618906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45089662-4	47.7143511418355	0	1.3466377083315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102297213-4	29.6256321397023	0	1.33562343740905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50255076-4	25.317931127961	0	1.338883072358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93142285-4	26.448956001558	0	1.37318807232078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67161854-3	10.4538030951098	0.783419244857311	0.959480884910997	0.816503233339539	0.414212375007353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.71762629844815
Merged-chr10-118085381-12	340.408664861167	0.248222622245161	0.146038156759267	1.69971073145176	0.0891853497771252	0.846668953638622	C57BL6J_F1_Control-BALBCJ_F1_Control	9.02548629675799	9.26581841289961
Merged-chr10-117867507-4	18.3502401223262	0	1.37226389711697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149246180-4	35.0880567086685	0	1.34012357025045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-63901591-1	2.36708578931057	-0.0331631656446701	1.39746282125908	-0.023730982420549	0.981067192562449	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr1-7894863-1	3.54428564933941	-1.85148305668816	0.944318869178265	-1.96065451736583	0.0499193381249908	0.589025150580293	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52310433300605	1.44790810950236
Merged-chr4-138943906-8	75.7648523411916	-0.145458672163665	0.187996726536644	-0.773729813509874	0.439090585598546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.94573662739537	6.78388359672237
Merged-chr13-36534302-4	46.8924142435758	0	1.3379641271106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125124577-2	15.0927840880141	0	1.34152063326337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32857818-4	11.2111749439613	0	1.34620999124129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84183637-4	22.7064018848008	0	1.33546712552578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113351682-1	2.62441123171218	0	1.42058822344276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-52288071-4	16.9961678790096	0	1.3498292927075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5570448-4	34.238114418449	0	1.35121531878175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72852721-4	39.0744589045659	0	1.33319732821063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19895841-4	26.790429408995	0	1.33621712472337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-92822553-4	15.9919650738075	-1.1514670662722	1.22201203669987	-0.942271460256495	0.346053675963768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.303163067301871
Merged-chr17-63849747-4	17.4564525535171	0	1.35172334886057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84752953-4	20.1647042410859	0	1.33871806689789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104174955-8	92.6190621902774	0.211026875942026	0.207117411808083	1.01887559379878	0.308262031824123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.47966155821709	6.70015345250585
Merged-chr9-110849423-2	3.82409079217303	0	1.47151575856943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128373479-4	80.4885678191551	0	1.33636952546334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80099034-2	3.59579990790154	0	1.44956763973299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70838682-4	43.2011841193289	0	1.33649020513016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126881970-4	19.1627641582181	0	1.34895029809261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14892812-4	18.9091490454872	0	1.34041078084216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57407588-4	15.5785543850007	0	1.33708175391623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107441166-4	28.7415794940239	0	1.33775890310087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117949480-2	4.928673798987	0	1.40809551650536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39594909-8	70.0671930215251	-0.0938530109009751	0.242851566391842	-0.386462448216385	0.699154208433841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.33790008103122	6.3158699595465
Merged-chr1-34028931-4	27.6480451592502	0	1.33821542657545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95072799-2	9.21143593609582	0	1.39276314125431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118097737-1	6.69029635339861	-0.0367394951228097	0.892610883696109	-0.0411595867738912	0.967168671434714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62635771927786	1.60310561942228
Merged-chr1-13648066-4	33.6524145979308	1.7474013596166	1.2164710828231	1.43645121062915	0.150873989978918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chrM-1977-3	286.76239868348	0	1.4185240257664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25561381-2	8.20650727587157	0	1.42240126490306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134095215-4	27.7190616882891	0	1.33846629824236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149842051-4	24.5782569818829	0	1.33704706884488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69512440-1	4.82424190092653	0.659144418489232	1.11258303082464	0.592445148116882	0.553552541175132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.3019284004821
Merged-chr5-146676657-8	56.5938541081032	0.281196304268616	0.248508830267523	1.13153445680745	0.257830209211957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63898495139744	5.91797015672862
Merged-chr10-12868328-4	13.8802342486394	-0.891465334838799	0.839988755095149	-1.06128246292752	0.288561553135579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47934711566824	1.27743081564928
Merged-chr17-8868095-4	18.1066592306919	0	1.34696563774951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54903033-4	15.1322282936096	0	1.34369713557117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100357181-4	22.1115489111988	0	1.33829479593803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132611519-4	34.7267159973001	0	1.36567915184829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46999123-4	18.4906927267744	0	1.33682855277955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119856812-2	4.42787049582742	0	1.46044397425878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106998802-4	13.8314811305947	0.580629235798328	1.30577060853493	0.444664041297263	0.656562559239803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.465515277017237
Merged-chr10-21827662-4	18.0185654055038	0	1.35921966499876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103305322-4	55.8447401845778	0	1.34055327686703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64655783-2	5.40564042031675	0	1.44447781923123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36673371-4	18.2105206035019	0	1.34333596214521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98805032-8	141.492800907199	-0.0235035282008892	0.204585977019839	-0.114883378339318	0.908537560019156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.0975453400136	7.06390668802749
Merged-chr1-128399243-2	5.3789149289335	-0.0347355516252629	1.32719325446897	-0.0261721881936184	0.979119998887574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr4-3510822-4	31.5222498648762	0	1.36036758820122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11139920-2	4.95590882237994	0	1.41959593016062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105771604-1	6.32144620230855	-0.101747549057932	0.851739029345062	-0.11945859653299	0.904912040269715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12695852494485	2.11639961854063
Merged-chr13-60627181-4	19.5261874469617	0	1.36224688115762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20060791-1	3.65453587600322	0	1.48365074212212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93912168-1	1.98814161294665	0	1.61480876468291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46378781-4	22.4902654131537	0	1.34186993132337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9337366-4	18.9304068765727	2.15173688880019	0.855963861925682	2.51381744546946	0.0119432238266878	0.227477822002425	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.7424253287358
Merged-chr17-26886245-4	14.2003865343024	0	1.34208771439846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38900310-4	27.8768607516494	0	1.3372008703341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24103078-4	38.2450236800736	0	1.34443380718038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98956432-4	22.1655054065366	0	1.33448408626906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6779039-5	23.9197355244865	0	1.33784956419592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116953501-4	23.1021819440018	0	1.3539328206321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67772512-4	32.8680272259804	3.14579823070288	0.477392951922064	6.58953639352523	4.41202077483478e-11	1.83078654426904e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58707500045288	5.66135401939633
Merged-chr2-19004947-4	26.5416649042073	0	1.3377630967979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76884702-2	5.14043504652453	0	1.38822506472691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158160080-4	27.4010462187114	0	1.3455663866133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84529377-4	12.1804389781325	0	1.35176058732753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56773628-1	2.76573314358209	0	1.48184162353121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16652620-4	21.0359361747933	0	1.33860790144838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26805103-4	15.3079753091887	0	1.34677919897531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76330185-4	26.2903926480849	0	1.33648439364366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34399354-4	27.107543402146	0	1.33648256957279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137973534-2	3.30977433447817	2.06549462952535	1.37515307729054	1.50201069512566	0.133094346741282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02186287315087
Merged-chr10-39417797-4	16.2721237182961	0	1.35871276004369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180766851-4	16.7437094332513	0	1.34787751304895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119403025-2	5.97660764433887	0	1.4410286917978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172277342-8	51.6060631569434	-0.470223554967421	0.251455498866126	-1.87000704732158	0.0614828392276302	0.677233162629128	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90983975048783	5.45625581127211
Merged-chr6-121226984-4	25.8129609898579	0	1.33586285486555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63506091-1	2.20781565557293	0	1.5134325155114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62504049-4	38.7942639263864	0	1.33366071075136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3185125-4	48.6761300177583	0	1.33848370496436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20945539-4	25.348079683004	0	1.33788678087981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45196717-4	23.4763986510995	0	1.33384287733194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121352445-1	3.49153595828151	0	1.39450892460964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107242819-1	2.13416785413559	0	1.47148252305575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50024196-8	160.396187626678	-0.149514343807804	0.181874614793393	-0.822073734576159	0.411034933070113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.33898319583138	7.18593304322151
Merged-chr13-4712878-1	3.61351545196736	0	1.55749031434335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101247361-1	2.88980546544182	0	1.42247386640809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45276858-4	44.3328354630517	0	1.33463819385167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59401193-4	23.9321857390139	0	1.33835029209798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52390517-1	3.07208872149561	0	1.39748249178844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109023179-2	9.29779902021731	0	1.35067885656942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59120073-4	24.3760777921632	0	1.33723882849829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51809768-4	15.9574032964514	0	1.35154791765603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84785354-4	60.1428228893695	0	1.33665749267943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99182332-4	17.9187463380573	0	1.341348688924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86430210-4	16.6367062746209	0	1.34469240949489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127290407-4	21.5370831205164	0	1.34723096479635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98835627-4	12.3546099311906	0	1.35759997521779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126628749-4	17.4013285421905	0	1.33843579977475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117939874-4	16.8674830522543	0	1.35095272454572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80107344-1	2.03261819940139	0	1.49159511966134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47394401-4	12.7700016881742	0	1.34286853942917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46833465-4	29.3474489212042	0	1.34123274141871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129495913-4	48.4790696619383	0	1.33886508102667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75917879-4	24.4334950809111	0	1.34844483712959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12433050-1	2.72218066185715	0	1.39111722460485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-17603801-1	2.19204245367324	0	1.43874529888859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69699956-4	21.2467306503399	0	1.34339251386102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82838581-2	7.96931716935372	2.2101348934056	0.948513005294821	2.33010499705129	0.0198006023909893	0.317973691394914	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	3.13361268185653
Merged-chr6-140767469-4	14.5071243349391	0	1.3425029789354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19167235-4	25.6204621594892	0	1.36553180077283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10741286-1	2.35684505986716	0	1.53265554268339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122572903-1	2.196693785136	0	1.5173618552247	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19713265-4	24.0718254752268	0	1.33956596455397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135962555-8	199.069201841047	1.09823513764229	0.227461892881837	4.82821594302308	1.37761662594197e-06	0.000168661851733288	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14330211070492	7.24456170928965
Merged-chr9-13495242-2	3.52218937338658	0	1.52731556657846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46612357-4	28.2654283967443	0	1.3339109685324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63708823-2	5.97594457468411	-1.50797997501576	1.67872948659992	-0.89828646428914	0.369032846916693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr2-32882823-4	37.8661936725343	0	1.33956163399428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28306923-1	2.21178924323328	0	1.48608374230506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43880402-1	9.34019558813105	0.0269314832086591	0.492948952066151	0.054633412031364	0.956430519548305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78371563946567	3.90094220414478
Merged-chr14-48422198-2	16.319989414928	0.6253524662901	1.35663150652308	0.46095971034376	0.644827511189588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr2-94273445-4	27.2260811228666	0	1.34531629653098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-32908416-4	15.7848636025579	0	1.34353766436161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49952046-2	4.46601117003452	0	1.42735372065899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114928384-8	63.1429240373332	-0.445276430370362	0.335039880663786	-1.32902515810408	0.183839669910617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.28024204980647	5.78212067389942
Merged-chr11-90225404-4	42.9953680867133	0	1.34177366765445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-50105-1	4.40267858252909	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96185817-4	10.8904854372222	0	1.34350292063724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122571445-4	29.5916609371301	0	1.33979555085617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45246776-4	31.7580190569186	0	1.33817807278446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125379160-1	2.54500319772487	0	1.47668008472759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27228242-4	24.8378151718998	0	1.34270493021488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164936126-4	27.950113068468	0	1.3390443086808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35808095-4	27.9514657555226	0	1.34283117551148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56141783-1	1.67104179087535	0	1.65882618502347	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43420025-4	20.5035491503838	0	1.34546744279588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87806215-4	20.7955672344855	0	1.34380653062313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110707012-4	24.4549204537839	0	1.33684137689671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-68735392-4	38.4473388291474	0	1.35664223551797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146247870-4	39.8527485109735	0	1.33539036715478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88706087-4	15.5355984202008	0	1.34404262866334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75121237-2	5.8515249190461	0	1.39630197402998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56801469-4	13.7753021493254	0	1.34360361531928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33401432-4	18.8354494343741	0	1.33680954132857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86278316-1	2.67140172253374	0	1.61082459039154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140611241-4	19.7057628314732	0	1.34032308229178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75867413-1	2.20095576358676	1.49427421843504	1.62463254866802	0.91976134521012	0.357697487374511	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.730937814817307
Merged-chr6-83044972-4	26.7942493068325	0	1.33797670087682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64379156-4	53.8264920731654	0	1.33582182293967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22359212-4	23.0071723693963	0	1.34040729094049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9389427-4	20.4183986508815	0	1.3406895314845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95833503-6	35.5942546925809	0	1.33345546833853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40136196-4	22.4624541764829	0	1.33764550163795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109051996-5	23.1076647508715	0	1.34268168216044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95372101-4	27.7965597132207	0	1.33973602702502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167335273-4	30.998820430499	0	1.33963084155644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8535612-4	13.9760732657389	0	1.34632688916305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29513462-4	20.4559996629554	0	1.33933042563074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17518677-4	51.5312258402446	0	1.33812999305526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145111531-8	123.439178320013	-0.105802389043926	0.181564217661483	-0.582727094615028	0.56007703051023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.94383746866802	6.84501109432697
Merged-chr13-37963605-4	17.9658360223097	0	1.34474327416778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4677905-4	93.8160810713307	0	1.33572316874176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100678756-4	19.2655136128958	0	1.3412942669392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6601514-4	19.5810730497398	0	1.34030892134651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-150925259-1	2.69607597345489	0	1.4129140498185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99441255-4	18.3878841898846	0	1.33896281239407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32138087-4	58.5963879056219	0	1.33791483589006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113573558-2	3.38611590707989	0	1.5040041376402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50494255-3	9.21553112558999	0	1.3774269203338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133911091-8	173.544853488499	0.0409157319844818	0.184714077863995	0.221508465719695	0.824696545621538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.28164097675816	7.32121981819867
Merged-chr6-128839661-4	14.4187820667819	0	1.35188267207571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141271852-6	66.5023122384634	0	1.33667690958339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85114127-4	27.3631656152039	0	1.33618213435791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191275860-4	52.7722043478931	0	1.33759159256905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86472380-4	56.8002689908495	0	1.34049153251267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-53434464-2	9.6433466965606	0	1.35490698597076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128706762-4	30.0129788574289	0	1.34578274913706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135990797-4	16.2730904282383	0	1.33817167701855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5802410-4	28.3977274875496	0	1.34720191182066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39570667-2	2.79177377953732	0	1.47905178414986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91038189-4	18.9763326169997	0	1.3393349302846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76226677-4	22.860516870415	0	1.36303593288247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138519423-4	19.2874923663062	0	1.33788170748295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59332745-4	13.0256444469842	0	1.34840651605171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119784958-1	1.64049456887029	0	1.47695027275812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64187578-4	11.4856731990377	0	1.34684730273388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116672959-4	33.3292123761298	0	1.33406180403205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5093830-4	41.4440860079195	0	1.3332329189674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-37164-1	29.1092859368055	0	1.34371002815852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74349877-1	2.10813530014437	-0.0299586028646579	2.38945085573317	-0.012537861070788	0.989996496315209	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr17-84141183-6	34.999591025568	0	1.33337022283925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158174670-4	33.9340537838062	0	1.33441031069792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72259525-4	22.8663202105305	0	1.34474163513487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27227892-2	4.33665211139484	0	1.47004589993324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135914125-1	4.16505011961092	0	1.38432856581778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152621995-4	24.5765212620878	0	1.34330328710438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40247473-1	2.84296640543024	0	1.43263162237744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95624516-4	34.2821166370996	0	1.34241250484697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24591952-1	2.97817982643133	0	1.4818826986996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65938154-4	16.5567233578319	0	1.34590619786902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51315728-4	11.2728964287496	0	1.34495350960033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70798002-4	13.1250772604619	0	1.36034287081264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23297007-4	22.0233123685963	0	1.34589142220981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69554965-4	35.0480520501713	0	1.33956756724086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34360196-4	13.7363326786298	0	1.34506214257076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132008391-4	23.2278114087253	0	1.33992112770413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-160510409-4	18.8003949667075	0	1.3456763490494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66806468-2	5.10966941555504	0	1.44214883863987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71656974-1	3.49982545569445	1.99086007412091	1.00148129770383	1.98791537963366	0.0468210495090535	0.564805623499989	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.67260559959533
Merged-chr6-91716434-4	31.6541575975598	0	1.33793875630619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80582776-4	15.9382352259962	0	1.35236198033812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120100076-4	23.7889037867904	0.46104156839139	0.540373605623028	0.853190391969327	0.393553730651778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93997370148483	2.49351001813506
Merged-chr12-104124187-5	30.707740223878	-2.13255091617627	0.604469846014174	-3.52796906287078	0.000418761096080225	0.0189379654091722	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08683071130443	1.86501351763573
Merged-chr12-73687587-4	40.5366783580737	0	1.33252313737841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44119934-4	33.3453942766667	0	1.33553262497909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70945006-2	3.82773565232692	-0.0407483338959984	1.28085559841455	-0.0318133706457127	0.974620883800833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.723581231604105
Merged-chr4-35100005-4	49.3892082256016	0	1.33433631196735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108445242-4	27.1613740580296	0	1.36210126275603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167925164-4	75.0267374704701	0	1.33881126568654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53254696-4	45.9820045914765	0	1.34140623930256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4896819-4	20.8802633916539	0	1.35336899982749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44953127-6	55.3841895750554	0	1.33675489385776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45704768-3	14.6404628825763	1.06810787633853	1.00277525136492	1.06515181231755	0.286807235859955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	1.6575336582811
Merged-chr10-18943498-8	117.425828641172	0.176342093463298	0.28881494031133	0.610571230398291	0.541483473718363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.38337649124651	6.59414520104789
Merged-chr13-34709213-4	31.1750116827625	0	1.34192391165337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100596516-1	2.45692683745863	0	1.4562360713613	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121681002-4	36.9580091576794	0	1.33982360513609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160621421-8	31.7969040088564	0	1.33570701116615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35259267-8	108.012646421431	-1.08175395955874	0.220024785754197	-4.91650954618919	8.81009037185116e-07	0.000115122043875831	C57BL6J_F1_Control-BALBCJ_F1_Control	6.98566717218375	5.93258891053299
Merged-chr11-114898244-4	41.5645690694096	0	1.34122155110697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122310405-4	18.3981446946062	0	1.33809712377381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102827118-1	2.36996093182771	0	1.53604779995195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19877250-1	12.7242273887902	0	1.34623355942172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134762568-4	21.9834313815917	0	1.33855810418356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150311403-4	40.7573766844147	0	1.34147421769263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45126184-2	4.55117797342678	0	1.44654334565609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33095594-2	4.14565762545965	0	1.45098156337552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-105777919-4	19.74304377001	0	1.3464543764567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41346651-4	17.369804632185	0	1.34538407633985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150064399-4	20.0256469375894	0	1.34332132404545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70342396-3	13.3083943135759	-1.91852771637999	0.774308423548514	-2.47773065361698	0.013222091687283	0.244718992859726	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07512165512684	1.18984215491549
Merged-chr19-4300466-4	38.8474835424995	0	1.33562541146535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92867421-4	62.9990959127261	0	1.33412401562486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73180849-4	15.4556015877262	0	1.34511953686015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93084519-9	79.6269214502245	0.211519597885243	0.238571152675816	0.886610118251253	0.375288844419356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14779021486254	6.35068860003523
Merged-chr5-123884607-4	21.720411726185	0	1.3444059260255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50504564-12	69.4398836528547	-0.52420155020853	0.293463107741472	-1.78626047492937	0.074057093382452	0.758558420798324	C57BL6J_F1_Control-BALBCJ_F1_Control	5.58892994402259	4.87775794007799
Merged-chr1-37491896-4	43.0370846163473	0	1.33570889903203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165621911-2	7.27443771043091	0	1.38787273290088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90509443-4	18.3884680060969	0	1.34313519629231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74018421-4	31.308851386706	0	1.33395043122377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34314211-4	11.2929447662875	0	1.35964023831037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20313671-5	24.6152020131398	0	1.3332552687609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61643883-4	10.5393187064315	0	1.34585300699519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66015161-4	12.9163598110383	0	1.3415578611953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94378473-4	37.6520623634461	0	1.33516405248103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90516122-4	35.6745777238194	0	1.34141539542505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105595412-1	4.81400116968233	0	1.37285690432253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80609850-4	20.6738335915993	0	1.34524508152728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79750409-4	37.6635517479294	0	1.33882879625446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37769463-4	71.4572363978108	0	1.33455132407068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101827127-2	14.0456537213828	0	1.39561390280959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167765391-4	44.4792560915491	0	1.33673069555065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69186466-4	11.9739157119327	0	1.34178605529707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8842435-4	13.2290514771092	0	1.36780388802256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123566887-2	2.80881128996327	0	1.50076357416114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84004027-4	24.3301381151489	0	1.33900695288994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55208446-4	25.3859968574816	0	1.34613103928598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5649707-8	66.1270952583615	-0.513449921879628	0.2608952656802	-1.96803081321147	0.0490644924561236	0.58247257091695	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80840650902116	5.32313620722794
Merged-chrX-36758720-4	19.3525677859623	0	1.34305646572195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101594490-4	33.8418497442756	0	1.33472649905006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127137264-4	13.0737418357235	0	1.34172113979811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45529734-4	14.0037801726944	0	1.35408544162684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41402766-4	28.1492302058552	0	1.33942178756668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72851950-4	17.8250578965223	0	1.34819770827989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22058729-8	157.15232925453	1.12295312967465	0.201852949353611	5.56322378875644	2.64835905909311e-08	5.45431965864079e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	6.85069736682463	7.96674475699827
Merged-chr11-86624481-4	26.3381796169367	0	1.3457615883892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39230860-4	44.0807788437778	0	1.33786560842672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21024717-4	18.2270519544739	0	1.34297479690714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144716066-4	14.6922987211697	0	1.34658700149583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62574733-4	33.7358174798999	0	1.3346605500854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-111096831-8	57.3464847956579	0.101010532897867	0.259124981283631	0.38981395154373	0.696674126448229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37896782671077	5.53220276038913
Merged-chr3-105910677-4	17.228601997664	0	1.34057714922922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171554132-2	5.89798757369236	0	1.46465108193714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121427438-2	4.19559056062816	0	1.39853804327953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172643843-6	59.3402664430301	-0.198347385138236	0.437004043370452	-0.453879976964184	0.64991521590034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88182634999943	3.71687266985999
Merged-chr6-133960150-1	3.8455283163719	-0.748363149420713	1.01802656903159	-0.735111609250635	0.462271524621906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52525172700064	1.50549197367979
Merged-chr6-129232460-2	4.26010701046548	0	1.43385647007844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184659743-2	3.16236022742263	0	2.30356921866151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39412973-4	26.150328023949	0	1.34101780864365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115463126-4	24.1187120331836	0	1.34158629910772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115641384-4	73.0741423411283	0	1.34028923193753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23921684-2	2.83301010502521	0	1.5331430059735	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49858766-5	53.0331225581211	0	1.34076163045177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176828191-8	43.2086121516659	-0.0645878657107082	0.250430053713465	-0.257907806004019	0.796478060300006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47083410118651	5.38972130356373
Merged-chr18-35730481-4	28.4801198287796	0	1.33810058158577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5573227-4	49.3052126377677	0	1.3413331801632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71094059-4	19.1778126590727	0	1.34252364798916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147742695-4	20.3156809349674	0	1.34065359467637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12956213-2	4.92488359030126	0	1.4135754183137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145740910-4	83.1553505165754	0	1.33588437591464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126739648-4	16.8447534766619	0	1.34093634242769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-56089713-2	9.2283548889156	0	1.36840933156769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5789592-1	2.24272930371666	0	1.6272326650613	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-10331941-4	16.9213715614158	0	1.34040190228108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-5277162-4	19.8840467997673	0	1.33871582778595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-137898521-4	24.3700734836437	0	1.34144441972902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91748424-4	57.4118546606596	0	1.33629206777028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184261411-1	2.83094749956129	0	1.49947014976831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74241048-1	3.65131441631477	0	1.39531320870432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139666686-4	17.6823773800845	-0.513789200119192	0.634782188172046	-0.809394481591753	0.418288275395333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8441881967244	1.92460482503279
Merged-chr4-128720269-4	32.6630378901974	0	1.33636935105186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101600444-4	25.236484135242	0	1.3408162060114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28383152-4	107.651366498002	0	1.34030953100539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86381198-4	13.6013237167263	0	1.34224766320922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10383280-1	8.79523631098371	0	1.35128378273028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10546809-2	5.27961022078252	0	1.45670229399481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-17643121-1	3.4321556767904	0	1.50804994711387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107100478-4	13.7176557905838	0	1.34714975348238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61621590-3	11.0407174649386	-0.946971726479314	0.859378876373314	-1.10192576582247	0.270493945942618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0509200531463	0.88866493597531
Merged-chr9-99212850-4	36.3150851836849	0	1.33606812954525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9859180-4	23.9734254673638	0	1.33652900911293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69593350-4	22.2778514238265	0	1.33885989016767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38758683-4	31.4108007557706	0	1.33778827070927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35595349-1	2.02010486627959	0	1.96024799717892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112867502-4	21.7069293912322	0	1.3629161219873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47347228-4	17.8784748148253	0	1.33656235849799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34865760-1	6.3816184532922	0.356829020566059	0.688771075197968	0.518066210117052	0.604412074736855	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41684433297733	3.29033113327465
Merged-chr17-44027443-4	24.9218330689684	-3.01846191092476	0.396324537090455	-7.61613684856418	2.61380569601496e-14	2.36806439716128e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0591051092334	3.13745573901568
Merged-chr3-127769334-8	166.862029113348	-0.0532283108798305	0.163170050085231	-0.326213731331374	0.744262653058933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.73240688241987	7.65666462225057
Merged-chr11-21048891-4	14.131123891609	0	1.35177434545227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96332984-4	51.2230104946418	0	1.33840044500926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114295737-4	14.4548933099602	0	1.3502042200246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117041621-4	21.7449898847922	0	1.33849024304525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120866033-1	2.028231633994	0	1.59292594876156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101246448-8	219.953973643282	0.000175423627996669	0.188029238766959	0.000932959305409339	0.999255606282345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.06120238025169	8.05809335289321
Merged-chr9-119248187-4	13.2999531971792	0	1.34980012960085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4409296-4	12.8109004251555	0	1.34718622351906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90187674-4	19.1946799002275	0	1.34548426793654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113628315-2	3.33287639866262	0	1.428230231159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29436817-2	4.77218853953111	0	1.44803385805403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133495647-4	21.9919489012301	0	1.3534942620858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124125753-4	23.1656888378039	0	1.33640350833502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135746318-4	51.2050270306523	0	1.33594650516896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123427769-4	26.4391333290188	0	1.33426623732628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120150399-4	39.4345993677915	0	1.33568019436106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31158602-1	2.21322991791476	0	1.52576428975376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48453799-4	12.9095961303215	0	1.34285238033229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73915069-6	120.085755015353	-4.87642775051826	0.453300869140866	-10.7575962952828	5.45751225860707e-27	4.23807012665174e-23	C57BL6J_F1_Control-BALBCJ_F1_Control	7.25001481834748	2.48022143839732
Merged-chr18-43509145-4	45.3141627090541	0	1.33988403419979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143055775-4	24.9725562939986	0	1.3364553623105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93688469-8	75.3510471441537	0.253658545324608	0.220854614653556	1.14853178740462	0.250749098306447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2223568708141	6.50318844964874
Merged-chr18-89181802-4	24.5829372068576	0	1.34018149741332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68407469-4	20.3536382481649	0	1.34375737633011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-88828508-4	35.6233225676078	0	1.36065189096536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36636947-4	27.2778109081265	0	1.33663738022347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12176786-4	11.5823083239945	-1.17737851128676	1.22851388536366	-0.958376234337989	0.337873074735116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr15-83009192-4	21.1125691818291	0.328925903340336	0.549831729818688	0.598230122966536	0.549686394537472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36453465698696	2.68787445423825
Merged-chrX-61680159-4	22.2374739173988	0	1.34585835462728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30693409-4	15.6876508671472	0	1.34117487505705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52797540-2	5.91235314707232	0	1.43141596277067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96911769-8	75.627664942993	0.148677104678134	0.270228783946163	0.550189741103799	0.582189239276659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6038770434102	5.75441998811944
Merged-chr1-128722222-4	70.8551136765228	0	1.33886222655222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39737662-4	23.5627902903564	0	1.33873627976371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8667462-4	28.9034247286142	0	1.34095431639076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117859136-4	19.9875451200385	0	1.34317605760875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-95749334-3	9.70294070443385	0	1.37640435944282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68188046-1	5.24560373320845	0.608834886540142	1.17804285727634	0.51681896187358	0.605282542027738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.11893902259477
Merged-chr2-116963294-2	3.01523665331856	0	1.59953139973878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88827716-2	6.97152592149242	0	1.40351544337586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53434063-2	8.40896321266958	0.479841000989684	1.51178633467731	0.317400012146629	0.75094009799811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.723581231604105
Merged-chr11-85521156-4	28.3706013591349	0	1.33762577568448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10429232-3	15.9563269453577	0	1.33909646820883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-18234122-4	48.9353637112291	0	1.33385482228523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171619226-8	101.511739435246	-0.0825532581190336	0.189685902076211	-0.435210298791028	0.663409787815586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.87941803878254	6.7987932016129
Merged-chr9-13701947-4	18.4405965398985	0	1.34577624527048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138982439-4	17.0548032234583	0	1.33883299337601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66662159-4	18.3603611823977	0.257412659545693	0.518008142845105	0.496927824593415	0.619239949215405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58303346135974	2.78276122455344
Merged-chr13-44771049-2	4.81199605442898	0	1.48109896899588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8452361-4	66.1033355729987	0	1.33699771894778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136148059-1	18.760600496847	0	1.34156140755956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102498957-4	19.7560437454213	0	1.34058204700557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59221723-2	8.8883517524791	0.149694196182372	0.781861429640208	0.191458729779339	0.848166211252303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69733277475078	2.07708945522428
Merged-chr11-118236743-4	24.8214247920993	0	1.34339025663291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36530785-4	17.9927980770945	0	1.34047077007097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169123317-4	23.1052005704894	0	1.33971984095741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67712797-4	9.79629717131241	0	1.34887526172074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35716672-5	64.933672775158	6.28277305977564	0.887286415258866	7.0808849901558	1.43236744024597e-12	8.46326757438378e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	6.44985232972462
Merged-chr13-42829156-4	57.3076302657298	0	1.33614872652544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29624487-4	12.829500236491	0	1.34545387756719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118691096-4	21.6213358043863	0	1.33984938907536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58275334-4	62.5952628175439	0	1.34044199197081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70968528-4	19.7561031048098	0	1.33905056336389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23136031-4	26.2190721138225	0	1.33807184742322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95888857-4	15.0364698078722	0	1.3453657532656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94993678-1	2.56814033175382	0.731197421586839	1.4535024268368	0.503058961640756	0.614922818489538	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.25298535761957
Merged-chr15-84996060-4	24.8516179999698	0	1.33992087082768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-18319616-4	25.9206185398419	0	1.34062751815924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77874995-4	18.848014182135	0	1.33851601087233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126231922-2	3.00149891677841	0	2.07179358201053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51805402-4	11.491816386357	0	1.34610303447605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110426992-2	21.1893631054873	0	1.33688207812497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61648861-4	28.6564437288437	0	1.34296591615841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-8786-1	2.46947514703676	0	2.04201866464473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-15598-3	209.385887970023	0	1.42217914263771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112308889-2	4.30704864601756	0	1.45251221059571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156615782-8	86.9813209441023	-0.163205094918614	0.224929013296391	-0.72558489688281	0.46809328262501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.15345991300467	5.95982176204597
Merged-chr17-26535550-8	218.268989473876	0.314515270581214	0.180330701308067	1.74410274179499	0.0811411760612994	0.801081218582669	C57BL6J_F1_Control-BALBCJ_F1_Control	7.48193681452393	7.79287173082899
Merged-chr18-5397530-2	5.00432701073723	0	1.45912222315478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90146528-4	16.0635295375378	0	1.34481353117491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71981598-4	29.3891377919046	0	1.34230499415682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85113695-4	9.42107944891083	0	1.34852926809074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139294342-4	14.6356286344955	0	1.37315893324792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91385760-4	19.7833963837096	0	1.33793202468392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36938804-3	18.1413555128536	0	1.3364057940605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14640367-4	14.9310932396494	0	1.34331181414848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123327156-1	2.09322144812078	0	1.68355341149819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127478431-3	25.0394884986721	0	1.34521526343825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81298887-4	47.4338327279339	0	1.33512224066954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79168143-2	2.90597221865424	0	1.54164464499741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46432839-1	2.5784121938913	0	1.49058745941491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5510329-2	3.96699889667737	0	1.67145096434618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37703395-4	20.5387394165688	0	1.34129403539272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50097981-1	1.86876854067276	0	1.71010130246376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29488616-4	29.0980696982843	0	1.33597581634048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83482626-4	22.6947254065017	0	1.3385007330471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-74233963-2	4.8987692347247	-2.24760220859833	1.28232657163191	-1.75275336121126	0.079644351862747	0.791623207699225	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0
Merged-chr18-68059195-4	24.0554214329179	0	1.33684466109056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24859985-4	18.7027010254383	0	1.3408140857374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21642248-4	130.543355045272	0	1.33706650660368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14106579-2	3.08523267038519	0	2.17956663469734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56795477-4	20.605236732563	0	1.33595382556685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58744961-4	30.0359430265094	0	1.34215985121129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45150512-2	8.33721191467699	0	1.35183771329078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25275231-4	16.5886947974692	0	1.36321303776241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58829307-4	16.0098452534485	0	1.34710855910124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-13975-1	3.34885152086006	0	1.87888914922693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164071892-1	3.13239043020349	0	1.49440728966789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107269813-4	20.4581720046409	0	1.33820933625976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117719145-4	29.5176081940455	0	1.34521999036657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91766915-1	10.8728655210479	0	1.35174557067237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37339792-4	18.9169639111428	0	1.35856350489727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92878804-4	41.6244269702901	0	1.33445527471281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65730131-4	26.7732849984818	0	1.3348255041933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121316807-2	12.2084463055286	0	1.35068431267385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108831778-4	20.9242600924747	0	1.33602764320524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59292735-4	12.1176111861327	0	1.34936618104909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8705302-1	1.86822766840774	0	1.55730560731315	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160269502-4	14.2127216630317	0	1.34962123736233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138596352-2	9.78412512808682	0	1.40638570611967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134420302-4	41.8686122375181	0	1.33698611811168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-661-3	308.25911576077	0	1.39316029380985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167802773-4	28.7473977590686	0	1.3542311991369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40525954-4	14.8642675326497	0	1.35637237754008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64452961-4	18.3859370784295	0	1.33865354738881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5714361-4	26.6068763306567	0	1.34008264221719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19894779-4	26.3687742673018	0	1.34118499760509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40196180-4	12.1795408851371	0	1.3402813069486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56699235-4	22.10488500902	0	1.34324497950653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51597416-4	18.9711318150384	0	1.34194066565891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103017536-4	28.6219022749404	0	1.33396619246754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75032366-4	24.0597701427697	0	1.34168299922447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28540092-4	84.9251492512812	0	1.33645216402983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-43918351-4	12.092047455039	0	1.35183546435686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140890887-2	3.23443448757986	0	1.47483329685292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43331297-2	5.59683446849844	0	1.40002077500149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59431150-2	3.37666952324396	0	1.51836234994934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41386061-4	18.3864475752142	0	1.33888389975114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74387061-4	53.5577752107435	0	1.33925484036134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113114348-2	4.72444817078717	0	1.39486864541919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-11178935-2	8.23541878383855	-2.02838346342718	0.92375628205672	-2.19579937135695	0.0281063066881522	0.406136503387282	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30923017122179	0.67591700901439
Merged-chr2-174432697-2	4.2473017798863	0	1.41563382340018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75085059-4	19.7532659900981	-1.83318756421279	1.22729609393773	-1.49367994672833	0.135259292346135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr10-20966277-4	8.97560532824771	0	1.34875017911756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140207248-4	29.7852637517275	0	1.33618437726014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145942136-4	13.7777485675943	0	1.33906385665899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58018108-1	3.48744429445476	0	1.59158773133752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22166203-4	14.1633503959279	0	1.34648923605327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11034573-4	32.0086802884884	0	1.33651685453023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53188821-4	15.9299649835367	0	1.33951523773792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76251947-4	17.0202508983567	0	1.33675890585151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136143659-2	3.03471249821854	0	1.95265366375686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-5395-3	229.96471305527	0	1.57314388103827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90109617-4	23.8671370298527	0	1.35849232345631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95306571-1	3.7017524522277	0	1.4665152516741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21161372-2	7.10384741944318	0	1.36621862009859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41345156-4	17.5330762555374	0	1.34415277909929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113614097-4	32.88743322088	0	1.33827989689303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57096281-4	29.8575339587209	0	1.34620247473171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83867192-6	37.2807486426145	0	1.33824703212356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57619650-4	14.9838335533418	0	1.34374669966251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72601935-4	11.2278877895457	0	1.34136938239084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84240374-4	10.7120557261946	0	1.34151407013972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121585579-4	64.0159655079256	0	1.33779522025338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8691433-4	29.2994466127908	0	1.33775486646031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87408087-4	17.3433118966461	0	1.34999749084213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62661741-4	22.9859470570811	0	1.33894993196461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38372224-4	42.0378420751581	0	1.34171841442511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29850388-2	3.88050053392967	0	1.4846758633529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68242249-4	20.6936793613111	0	1.33891054734894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120479455-4	51.2374055822403	0	1.33534993853592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81849460-8	73.1008889497887	0.194181932861509	0.273704216165051	0.709459048831065	0.478039655538883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16495829654833	5.3668052875833
Merged-chr1-150151558-2	6.17715731651433	0	1.43895349863044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64082439-1	2.8790545952801	0	1.46772099644835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62152348-4	33.9234772537914	0	1.33416634286017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119062245-4	23.3225838147746	0	1.34363839072567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-17378-1	1.30954067404017	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111413513-4	11.6555166856234	0	1.35137495567767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99287388-4	16.2660694626409	0	1.34081393451265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-194995403-4	56.6528919780729	0	1.33531631171643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128506091-4	21.4442451984377	0	1.3413180673418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54369421-4	25.9892211024381	0	1.34636286617496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61668163-1	2.41438224862614	0	1.41914732730584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84764886-2	7.75496064646706	0	1.4005698973961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48454312-4	31.5268756006847	0	1.33535417276417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95822248-4	66.197086180402	0	1.33484457771661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113945369-4	34.8237770874589	0	1.34042137827515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113820355-8	85.9232118139423	-0.466710201384612	0.264061432820157	-1.76743039072454	0.0771561770748493	0.776918952075695	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12593810472769	5.6915999466864
Merged-chr4-123425819-4	15.8798086563312	0	1.34117664359664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25302046-4	23.4551748294008	0	1.34233837040608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21224624-4	26.4594147053126	0	1.3451016572544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-4816963-4	13.7003084674063	0	1.34960657432328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58266627-4	35.7416167725804	0	1.33644980071239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-104949079-1	1.70534072358754	0	1.52241490019514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29861705-4	19.8557737312327	0	1.33826019817992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32364502-4	18.2360157865134	0	1.34528234778142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17479105-1	2.13821808586304	0	1.50208160682231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134629720-1	3.04315160266602	0	1.40177310472749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17714640-4	20.8029546128831	0	1.35635324703167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67345347-4	54.0666989055053	0	1.33678258483149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46474926-4	37.7336261461131	0	1.33575377958846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34572755-1	1.84592438878192	0	1.64680847989449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81703336-7	30.578114161075	0	1.3394879425371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-85005742-4	12.5493146675407	0	1.34893450381347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44632143-1	2.78683576897275	0	1.49347380951556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90232905-2	4.34361358659992	0	1.40076731666698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66852217-4	20.3270426864801	0	1.34863138012578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51404844-1	2.66394490127377	0	1.63603130411325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44963030-4	41.1118503902207	0	1.33260067743048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66856769-4	23.5137406344009	0	1.34595112994948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104501037-2	2.47684063385319	0	1.57860190234828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6575911-2	4.47340871594563	0	1.40402881664566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-89160025-4	15.625284062094	0	1.34636880443608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9033979-8	92.1032482430726	1.32812750449243	0.251259894043081	5.2858714660793	1.25107718895761e-07	2.07973409524608e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.23004606626889	7.58035000854798
Merged-chr9-83568277-8	65.2631492646138	0.196822533331968	0.234636072171148	0.838841749739155	0.401558118980643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66682258249789	5.8537171731382
Merged-chr3-54709185-4	24.0356147268842	0	1.3355831640529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57906881-4	58.445131565436	0	1.33381854380305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95657396-4	43.0870572498805	0	1.33445617332116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17584132-4	16.2450203268719	0	1.34872170142791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80419510-2	5.53030024218391	0	1.43665922645388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94802520-4	18.7682309280308	0	1.34452906586295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111547335-2	2.82749491852043	0	1.62716816767395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86614342-4	31.3418584093466	0	1.34397963712898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116494816-4	50.4566478264971	0	1.33651056405393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151689741-4	19.7893293650437	0	1.34412423301663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21609748-4	36.641442295689	0	1.33481511301809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151057207-4	34.9992125728296	0	1.33764013209192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11429743-4	86.5242763380043	0	1.33970092332604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58516859-4	18.5541922057145	0	1.33836144070383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77858603-4	25.9668369766705	0	1.35356705200968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85391271-4	15.4723963999064	0	1.35296663052526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122281387-4	12.6475505311517	0	1.34975570349313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71625252-4	22.024922376047	0	1.33861435464241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91417143-2	4.3172624448236	0	1.43259985171281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39966807-1	2.16266029736012	0	1.52114510682781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98609632-4	14.0423370984608	0	1.351623784889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115823681-1	5.00255873699187	2.18347704716855	0.872843660962174	2.50156717041585	0.012364498490388	0.233625451173492	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13115973951627	4.30384475943453
Merged-chr13-52031644-4	21.1343091320441	0	1.33665727242124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31061037-4	18.7080321343978	0	1.34042350337498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59455690-4	31.8017757365457	0	1.33557384546773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100632948-4	22.6107999660549	-0.0359028874821919	1.10382423571941	-0.032525909760255	0.974052653956955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr2-11332633-4	27.0851008414447	0	1.33715364123292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108758100-4	55.7619181022936	0	1.34004379578598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43757367-4	19.7330689074175	0	1.34179010124657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106558451-4	16.1090643351068	0	1.34144654194286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164135513-4	28.4179597364675	0	1.34278049336663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102979318-4	15.9015211714596	-1.63514485473452	0.935458193204398	-1.74796144457654	0.0804707038734631	0.797067600557139	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08307023099066	0.662147012823607
Merged-chr13-5779601-4	20.9318597704068	0	1.34124315502229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37561721-4	14.4228380228099	0	1.34040128279311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120762970-4	28.1365314503475	0	1.33468158473251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96716021-1	1.88250923213335	0	1.56542560639168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70680112-4	29.9716137103395	0	1.34026583845741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120760394-1	2.13264779026878	0	1.46120713436546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3648520-4	14.9514940169328	0	1.34569821998126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54920281-4	16.1244710941415	0	1.34801759822498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46434093-4	18.2747403341034	0	1.33885310992812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136123579-4	23.1882479945975	0	1.34823795208623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127254147-4	39.8701141835837	0	1.33482368109963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118145947-4	68.7142015142289	0	1.33955981843149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-95898152-4	32.7257892321792	0	1.35653291267262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35728437-4	31.355125104858	0.157963057577428	0.615165437639789	0.25678142482043	0.797347510234777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45448509329049	3.07579416901881
Merged-chr14-19985291-4	34.0593289347014	0	1.3419808926364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183345497-4	40.8565945511183	0	1.33549612048041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87640492-4	31.1197302844918	0	1.3405689785909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67071598-1	3.16570178217232	0	1.41007987706509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98880923-4	35.9998922818058	0	1.33435757920769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58183863-4	20.3779549954055	0	1.34246932923925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55846358-4	16.5617978388047	0	1.35541266139405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96670024-4	32.5197661653924	0	1.33713009847364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84100789-4	16.2218212965757	0	1.3370997371977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155487951-4	10.5417980060078	0	1.35023947860004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29000661-4	14.0984380336267	0	1.35583782643818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88666548-4	27.0907329526323	0	1.33593780662136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132474784-4	17.0752629548681	0	1.34611059428627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80524450-4	22.9004246060333	0	1.33753356689434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24353294-2	6.01539184185117	0	1.40750174130139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74563955-4	17.3877061053316	0	1.34356343321907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79780881-7	30.6262591385482	0	1.34138619057424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131976742-4	51.7459845592359	0	1.33262993146714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44757891-4	13.4699859744516	0	1.34121950142668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45300659-4	46.0392388171251	0	1.33944251009763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78428370-4	19.297839120688	0	1.34137539288125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31090178-4	19.6098889365307	0	1.34544124541705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161500933-4	19.4645679428134	0	1.33686684876423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5945928-2	7.28704560205716	0	1.365322592052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33202350-4	22.0805486636363	0	1.33557741969302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-33211562-4	28.7592814171975	0	1.33478855006476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132103537-4	23.2698389071386	0	1.34485958865523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57113073-4	40.5525561609809	0	1.33828191894819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-112160343-4	20.8395285593945	0	1.34637608456241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92368506-5	20.7650224915356	0	1.34103534266033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96333479-4	31.2655912941896	0	1.33928744000682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3723461-4	32.0336410665538	0	1.35784590733797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121226306-4	12.7182613125325	0	1.34826552386297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52998154-4	56.7328576352403	0	1.34565611023482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33347272-4	17.9260210154636	0	1.34033156137855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103680497-1	3.37780415436228	0	1.41966831261099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61302412-1	2.16434267418169	0	1.46687803635549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95161443-4	49.0179774010141	0	1.33530930313265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119928435-4	17.5855400602834	0	1.33879781294917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122906594-4	19.564822636846	0	1.33750770414256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25412047-2	5.86412694312106	0	1.38073443704804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105431765-4	21.9119747501569	0	1.34237367114603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-19200-1	4.80364726972808	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130807052-3	25.4910683662378	0	1.35111391739444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35902523-4	35.3788513368236	0	1.33724662582209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8195830-4	21.2625094244313	0	1.3509938772133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23380233-4	34.349449756155	0	1.33428689150957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67242165-4	19.7842094271847	0	1.34045857266091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-121326836-4	26.1734362740454	-4.43713819897066	0.698151008340115	-6.35555652855126	2.07673359606e-10	6.92571543240649e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76630997908674	0.897114879832661
Merged-chr1-23433822-4	42.0151098030479	0	1.33645994831502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78350951-2	10.3953888919323	0	2.43690436862794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27617158-4	38.318132124299	0	1.33305537022407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129586247-8	89.1629627443901	-0.442357679344116	0.237628838040501	-1.8615488043952	0.0626667153080223	0.685688401253781	C57BL6J_F1_Control-BALBCJ_F1_Control	6.37515698279265	5.8728432848361
Merged-chr9-96392157-4	59.1037240509898	0	1.33609656026693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47768808-8	58.652224374014	-0.00835198887633498	0.25535053640473	-0.0327079355067306	0.973907495659231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45495081932089	5.45111633412711
Merged-chr11-117138345-2	10.3695267924993	0	1.35675932352423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25745193-4	15.6983703198189	0	1.34112194276486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27327170-4	15.2872980409019	0	1.34434580770016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24034293-8	64.8062163520045	-0.0599216726832548	0.309708218902764	-0.193477825340075	0.846584770762991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68728649012589	5.58741569327612
Merged-chr8-11767669-4	17.3877475960048	0	1.3382598151903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105455445-4	15.5584964534975	0	1.33704782161224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99345438-4	28.0747124589447	0	1.33793357894002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21183039-4	36.1603848855879	0	1.33851533901566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25124243-1	3.15308240175744	0	1.46908702332984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46231355-1	1.99889241073984	0	2.04890139321252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75796821-1	3.54870732119041	3.32475518098149	1.15709492016706	2.87336425303938	0.00406125567730667	0.106393155355524	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.30417511455525
Merged-chr13-41596528-1	4.48236162188269	0	1.42668525881551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32565319-4	56.5948632485181	0	1.33327276030431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89413762-4	19.1351397856711	0	1.35404372946418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20017724-4	26.4596800271034	0	1.33910393179339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88573505-4	63.2019468909296	0	1.3348345940421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124805354-3	11.8841017449719	0	1.34230755085129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34199691-4	22.3443149141059	0	1.33809570283159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72219784-4	59.0604705848175	0	1.340299076313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42005791-4	21.8390582490901	0	1.33850294403173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76151933-1	7.33567976616347	2.69998355584272	1.16899891137921	2.30965446550949	0.0209072916325409	0.330377751701537	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.25298535761957
Merged-chr16-92897112-2	4.92196077314555	0	1.41770121919143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117952665-2	4.88030585352341	0	1.40294480212208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58301929-8	63.8276643393343	-0.0591862759699711	0.194390492132263	-0.304471043417601	0.760769050196036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.62963515849042	6.57589211788393
Merged-chr4-119966858-8	125.66047927957	-0.31333230733551	0.276085579218717	-1.13491008194704	0.256412995229668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05705256177411	5.74432136602758
Merged-chr18-62169506-3	20.685813221519	0	1.3402064266433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8627312-4	16.862781861807	0	1.33876681898458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125619720-2	3.48871879805919	0	1.44959822220161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38367424-4	21.7609561192716	0	1.34114051995138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43399621-2	7.43607268659449	0	1.41945202479204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30620427-4	33.8111014969587	0	1.3374047955165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137881178-4	13.2869285317628	0	1.34547553026981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32194614-1	2.08594184836817	0	1.53982077651187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118612435-4	28.7513496522841	0	1.33804595335133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17550836-4	22.5664460880417	0	1.34889987585791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103478169-4	22.5120774401735	0	1.34295108975793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68939788-8	48.4372453741294	-0.164550635395374	0.283404985606957	-0.580620115214145	0.561496512191655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54347762689686	5.38380196312116
Merged-chr18-39653008-4	20.1758052335086	0	1.35090041079069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38384903-4	93.4859582642224	0	1.33656155780436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67025721-4	33.8546620827547	0	1.33564566362761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24629969-2	7.85530894321188	0	1.3527680596828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104973645-4	18.1151151419237	0	1.3378866618284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20468857-4	22.4024120451518	0	1.33587460705298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129803599-8	76.354331052508	0.156427715563223	0.210104900661124	0.744521974837342	0.456560751925296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.79830422002919	6.8991715683557
Merged-chr18-46434638-4	12.1322518280222	0	1.3626173747748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120517710-4	79.5543807614348	0	1.33586762866748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58720233-4	31.3135393926317	0	1.34145529343508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32132053-4	14.8721214135561	0	1.34618810479158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148902518-2	12.7465599089432	0	1.34872828827895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66391802-4	18.5384249880181	0	1.33861303490884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24564733-2	8.28917052160153	0	1.39419687060908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3198550-4	30.1993623271895	0	1.34678807004736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40585784-6	20.2144677544719	0	1.3380609299218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55664087-4	23.8228802480712	0	1.34807279041169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129746943-1	2.09055244443359	0	1.51969734692342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117201694-1	5.66564924109617	0	1.38607411545468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135314615-4	22.8220768545489	0	1.34220202926638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134532597-4	47.2421538873726	0	1.33331467549722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88960220-4	17.1199478301873	0	1.37811413572881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-133986016-1	4.56212420732525	-1.63184612686222	1.10321008745092	-1.47917984563826	0.139092254627368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92797716160218	1.14143228603163
Merged-chr11-3172038-1	3.89789849958399	0	1.42158981840985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116990339-4	32.0807016963006	0	1.34165019014174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55354244-4	44.7507175897002	0	1.33535689665952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3154253-3	18.0099866637583	0	1.34237308165089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90828914-1	2.76796316481662	0	1.47898689255646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75853762-4	26.9654269423329	0	1.3409434128699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180403336-1	9.20690377577734	0	1.34513641576793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62183239-4	11.620781326965	0	1.34106779321347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51089066-4	13.1736315771873	0	1.3415393849407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79354816-4	33.1422622710351	0	1.34225197168851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57363170-4	9.64685311488472	0	1.34802348648566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45038847-3	15.4010537911931	0.454992827948095	0.850360652350951	0.535058656218627	0.592609297621501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.81334941981647
Merged-chr5-140795433-2	5.70545664164251	0	1.36210469511068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34046534-8	130.335288328885	-0.134512150873938	0.187857001830972	-0.716034800741516	0.47396986065106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.08953534735187	6.95961570252798
Merged-chr6-98978004-2	4.13165059315312	0	1.93591071808621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122740290-2	2.59895471108484	0	1.47300766356797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36772724-2	2.8832929261705	0	1.48575087195994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45961981-4	27.1042034184333	0	1.33677832530575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10962228-4	15.1151757180541	0	1.3490862709684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116424227-8	72.3445105147613	0.401515859012655	0.232460592862175	1.7272426868958	0.0841240874722508	0.818048553097502	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57465509770596	6.00551796111395
Merged-chr3-75299644-4	22.0464566361933	0	1.34245870294799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159638687-4	24.5961328045187	0	1.33631716460552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125581445-4	25.2442884968652	0	1.34761874419351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17743832-4	21.4348600123701	0	1.33798317596988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68717622-2	5.5620107851458	0	1.44416660325861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86417157-4	27.7390844906863	0	1.33609275469354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19257529-4	16.0011555857678	0	1.34023266226577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95508980-4	31.2134947939202	0	1.3370171236733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38025496-8	83.7498717360805	0.0374419228229186	0.212606595415955	0.176108943138218	0.860208355127081	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.19623871573295	6.2188904444535
Merged-chr10-21605199-8	78.4240150091087	-0.299330103078115	0.20320841177804	-1.47302023798634	0.140745578825802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.99768756673409	6.69298159182865
Merged-chr19-9445504-1	1.64565149944882	-0.0331528914719907	1.76622552442046	-0.0187704746724624	0.985024207470357	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.413263464506793
Merged-chr19-55857566-1	2.13009071441917	0	1.63956469165561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28762117-4	9.45603397581759	0	1.34713359233704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13660448-4	25.0443041293156	0	1.33448225461248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7340894-1	2.49201729288175	0	1.61548728964356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-12780195-1	3.96259274847855	0	1.38712224734522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53130930-4	23.6426892157104	0	1.33903088120729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140108097-4	25.3311810942377	0	1.33957019147149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37658223-4	17.8749480041203	0.321833457947182	0.727445135345248	0.442416125024245	0.658188112558737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73775798795819	1.86404794779727
Merged-chr16-14351747-2	4.96041730965458	1.84459373218398	1.20226685885048	1.534263145162	0.124964928616096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.32509503823899
Merged-chr9-65569645-4	37.5496763287685	0	1.33301957131256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154046134-2	3.25551747916805	0	1.92462289828489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79572627-4	41.5306975508378	0	1.33359935161856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103616954-4	29.6014317197156	0	1.33791053276653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-28420863-1	2.36446781466729	0	1.42934169095329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135711255-2	3.06002002235363	0	1.49693097928515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-104937444-5	37.8819454980262	0	1.33921323642748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95519085-4	16.7942850449658	0	1.34063236018033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186444991-2	4.28828815306734	0	1.3835347012723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46267469-1	1.81432643147151	0	1.59688778060278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28420029-4	19.7024560748121	0	1.33589091780454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109863606-4	17.5475458587073	0	1.34007826563986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41467316-4	24.6835961841669	0	1.33535056406648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57541140-4	27.1714990904241	0	1.33723405385966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83748789-8	135.79538684928	-0.275382637758379	0.200245080328467	-1.37522798216397	0.169060775716918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.43225837982541	7.15632917956069
Merged-chr10-60257556-3	36.6243211934405	0	1.33849909663313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167754058-4	82.1335550715232	0	1.34000322333017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49417214-4	37.2666429252224	0	1.33676436783796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23557401-4	27.7555409873794	0	1.33559470888812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105717025-4	29.1693998376246	0	1.33569724395304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88131475-4	17.6715373480395	0	1.34829407287575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48813856-4	15.7185600315284	0	1.33945766412867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117476049-4	18.8485017820499	0	1.33599457738625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14842374-4	18.5033574676071	0	1.34306826244038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61199789-4	26.4943360765687	0	1.34934535501639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45685473-8	81.114548837366	-0.265973741699731	0.237501906645929	-1.11988044835467	0.262764711030375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.67041942676541	6.44543498573954
Merged-chr1-67477329-1	2.66522623587637	0	1.44277140865376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35813898-5	25.3370825154325	1.87768130652195	0.717107868547166	2.61840845551739	0.00883409914080899	0.1847061916165	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	3.22249212232618
Merged-chr14-57366924-4	14.7066417139107	0	1.34387109127697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19964331-2	3.29292312404126	0	1.47706248316506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106739698-1	2.87790495112853	0	1.43882158188023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77451578-4	21.9565091060878	0	1.34076206047524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94634237-4	14.1554371515454	0	1.35754780981397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-51737-1	3.70900444318516	0	1.80261975388881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45522033-4	34.8943496448737	0	1.33739088397444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191250222-8	98.4460690309075	0.376089816814682	0.199758212876869	1.88272517759509	0.0597376215385473	0.664497320297098	C57BL6J_F1_Control-BALBCJ_F1_Control	6.35798093849888	6.74038164108557
Merged-chr14-63103225-4	41.7235188981163	0	1.33522898257989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63389923-4	37.182011063003	0	1.33447831632999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54949211-2	6.44225825041351	0	1.37518479398525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-38820243-4	18.3846206443987	0	1.33988881449961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48419218-4	18.42712340871	0	1.34737351648939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56265132-4	12.9238700455881	0	1.3553497243027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3535505-4	22.5572211850914	0	1.34056417792352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44378055-4	31.2488634090151	0	1.34314461163279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122892374-4	18.6559688838405	0	1.34339914493581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165043226-4	21.497687799004	0	1.34919999396552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133583814-4	14.9975309558961	0	1.3502553210082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100024889-2	4.74892090362354	0	1.82303716730961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62349677-4	23.7203491875995	0	1.33768501940567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37321392-4	41.7736307813587	0	1.34154166430104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25509001-4	74.7497031309433	0	1.33827630206467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73779575-2	3.8148558367964	0	1.48012504943137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-98665150-4	52.8265474256282	0	1.40729919123769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122737019-4	26.2380769664554	0	1.34405954697838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98789027-4	40.3383754438678	0	1.33882308683259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16161603-4	23.5398114628292	0	1.33804335141004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117963567-4	64.3502787724099	0	1.34392573091202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145553411-1	2.22914848208152	0	1.55293852235605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80949656-2	10.7097337550041	0	1.37454758091642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-6310365-2	6.16642805586697	0	1.36199714721674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75170684-2	4.91526235340849	0	1.45116551280967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59435041-4	14.0643289791781	0	1.34676965803652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86434201-1	10.7102842883297	0	1.35126017510345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-31538449-1	2.36792129246	0	1.46176473259336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91358729-2	9.15688596019149	0	1.35349729191254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73803543-4	24.8000145842025	0	1.33453030382016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3695722-4	17.6978045294756	0	1.34483551513898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137943753-2	9.19078608111908	0.500783167916805	0.976061959683408	0.513064937065304	0.607905897352761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81653425145283	3.12601103139099
Merged-chr9-37041221-1	1.69301065109355	0	1.70555713079945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182909805-4	17.0313139584615	0	1.35004951894775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8093616-4	70.0201588117244	0	1.3346568353653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43544599-7	36.7468959636976	0	1.33564401181312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73293832-4	18.5085666341714	0	1.34520255956259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50361949-4	22.0751620527404	0	1.33585104741384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129058169-2	5.89256809966916	0	1.39978931606968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94191349-4	67.3666123576559	0	1.33706584860875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120883951-1	2.15459766628036	0	1.47284920416567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170252848-4	22.7980656493501	0	1.33718189220012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135640424-1	5.98364370360895	0	1.49889873735833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26483377-4	30.417354357255	0	1.33931840950751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60239046-1	2.56560640012647	0	1.48678043470275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17660957-4	13.2138261866924	0	1.35062745372324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22666206-4	64.3733211298268	0	1.33868459408285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103059184-4	63.2100162318799	0	1.34199011289354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43056657-1	4.66486503490929	-0.907910084572094	0.944928480312273	-0.960824129538411	0.336640603945617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17536435123496	1.51301315377886
Merged-chr2-79136163-1	2.70310487252724	0	1.55497711348688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35783801-4	22.1510959230324	0	1.3404926815144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46732721-4	16.7472347130821	0	1.33880759799112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102030076-4	12.582008102629	0	1.34497543717243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88952901-2	8.31088889457301	0	1.36950978269372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11333479-4	24.8321997493883	0	1.34027024790913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113681523-4	26.3314911348904	0	1.33758726540208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61397036-4	25.2833266942235	0	1.33588324786828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164862585-4	48.62517095555	0	1.33147273308768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153122893-4	14.1614613919815	0	1.34364449677704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144318552-4	24.4131859795228	0	1.34041576782849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-54045755-4	15.1219647667362	0	1.34530151221311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59729028-4	30.9362321693955	0	1.34122010328264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70963772-2	15.6363097008392	0	1.42234892103138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97814386-4	10.2913745549592	0	1.34746422953075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13671359-4	20.4415718278581	0	1.34108712436104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87275552-8	62.8638581003076	-0.100073608797412	0.264062438264976	-0.37897706866204	0.704704892488179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90376664068414	5.85662153730234
Merged-chr15-38245033-4	31.3931279190912	0	1.33590418725491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46890459-4	18.517241301238	0	1.34409614275587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121284994-3	4.69766969778786	0	1.41332728173529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34140189-1	1.85912107555614	0	1.54964977769152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124620664-4	30.5722080523895	0	1.33332027310925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19300486-4	22.4340695704506	0	1.3377845742143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66478340-3	48.3129622030159	0	1.33919479589288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-14639-8	1062.71004294358	0	1.40925648010599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19628218-4	32.1330225966735	0	1.34354139074106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51367447-4	16.0573838070592	0	1.3458849069333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28517426-4	22.8444724716267	0	1.34489906652841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67304466-8	54.4007459877431	0.499914983400953	0.21753805278896	2.29805763631586	0.0215585089638011	0.337820406100682	C57BL6J_F1_Control-BALBCJ_F1_Control	6.16451236205717	6.63260314330986
Merged-chr12-12278632-5	59.7678950242766	0	1.33316512145674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155483842-4	26.4421010458889	0	1.33908831501522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111562032-4	21.1050707303243	-0.0364931377540476	0.818947887739653	-0.0445610011337484	0.964457228349066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.44790810950236
Merged-chr7-67565285-2	4.70077889164127	0	1.43847209005653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53264291-4	34.2648362831159	0	1.34000770198581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106528115-2	22.6459992915328	-1.76431991840092	0.677919924115086	-2.60254914428714	0.00925335520543286	0.190387257990963	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56482664821757	1.4994506617149
Merged-chr15-98867525-4	18.9781575173375	0	1.34173299429574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107968244-4	13.5158888996509	0	1.34009325095313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68706696-4	21.6352418464117	0	1.34130365196861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27238815-4	51.9429024350232	0	1.3367285510006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88243222-4	27.609770133027	0	1.33750712068496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32997889-4	27.6577686804744	0	1.343303928843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45281075-2	8.80981516088578	0	1.35913526936791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58558316-2	3.68778212110705	0	1.45488026056984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101595831-4	12.189331724761	0	1.35005224585311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34534066-4	33.6715528985032	0	1.34049810694889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-21566846-4	22.296637180471	0	1.33642732759959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118371479-2	5.86192223771845	0	1.36655588135608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24625718-4	30.8601830884682	0	1.33949514431414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25910299-4	18.057987269697	0	1.33968798925741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24506940-2	8.27391062872843	0	1.40332283297534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113186224-2	3.61908430751607	0	1.40487038141605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104110950-4	52.931639928254	0	1.33418954417129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117367627-4	24.2121674079358	0	1.35840736486217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30464155-4	18.8470985260035	0	1.34554367672802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80695368-4	50.9736086547061	0	1.3359102809509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78769209-1	4.08839668445405	0.909157697586847	1.20909354518975	0.751933298464648	0.452091172158116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.897114879832661
Merged-chr7-88250577-4	21.0127102004676	0	1.34730403522437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6411507-4	32.8183672897736	0	1.33862939934864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46110829-4	22.5523032476656	0	1.37581462818624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12569903-4	29.8715142585573	0	1.33448623013652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44602247-4	22.0673582537908	0	1.33586404934556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26461001-4	21.8976243071124	-1.29102181853188	1.32221067148742	-0.97641158581752	0.328860542384555	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr19-5806969-4	19.1747386040506	0	1.33935549402206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22871940-4	29.1822466935662	0	1.33656063744708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57098879-2	3.87411046295249	0	1.4457908225822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124279800-4	14.2272911382491	0	1.35124169836743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97994977-4	17.2000948129275	0	1.34050559486395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63132505-4	54.9101378747384	0	1.33479899012807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14633326-4	30.4671527286224	0	1.3624884189546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99363233-5	42.8529052994643	0	1.33483918985696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40919691-4	28.1406778348609	0	1.3379926573765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97163209-4	19.2598167316952	0	1.33914856830857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3158295-2	16.2792865898547	0	1.34849489648354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4915980-1	2.93691155080485	0	2.0078673932516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37000527-4	18.9840410555582	0	1.33867106342393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-111089062-6	55.6893394253251	2.2880263141202	0.364716963631415	6.27342992587667	3.53179918697431e-10	1.08466142375557e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78275886666788	5.99505563246431
Merged-chr2-131171586-3	9.04742906591088	-4.33901108256012	1.05401288065287	-4.11665849839754	3.84405004333954e-05	0.00266528974879967	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96789871560186	0
Merged-chr3-37332352-4	26.7018774678873	0	1.33829664911863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150140662-2	9.28634860659258	0	1.36006589061639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77828684-4	86.4909951960743	0	1.33572532560218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38321211-2	4.59497208476674	0	1.40041341816661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31309734-2	3.24080138941267	0	1.58256535778339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138159142-4	24.6722803937662	0	1.3392175351127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81244818-4	13.5877463140358	0	1.3408613285196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116184621-5	20.3740979630713	0	1.34050261231095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166730768-4	13.587199590797	0	1.35190055587334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117364977-4	28.5445139979396	0	1.33441290698305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83078199-4	34.0161133083307	0	1.3368315782286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101175324-4	22.7193468976798	0	1.33940463706655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113621248-4	16.3891507290396	0	1.3412284850989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113635299-4	16.0077932036894	0	1.34346796388277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145692251-4	33.3771410650768	0	1.34160994560008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141952376-4	63.2123563326916	0	1.34011367354759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40125359-4	65.9174259432319	0	1.3369874753625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143990306-4	20.6273466069121	0	1.340235289235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59465883-4	11.5240787737902	0	1.37675905462841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66599786-4	36.8984685870313	0	1.33335541159668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57578503-4	11.4281979440238	0	1.34610145335042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98832619-4	44.3628122090505	0	1.3366232673053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63706538-4	37.1891780593972	0	1.33778527165736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164405620-4	17.109075206806	0	1.36092228339346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105393960-4	16.8477634504165	0	1.34954994496869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185224860-4	21.2293660626614	0	1.33769757464027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79178214-8	67.3687526210884	-0.426969508055343	0.257008068479438	-1.66130779699433	0.0966516448812355	0.891395786240089	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24593394409039	5.79807555841368
Merged-chr2-103605998-4	37.4236985545839	0	1.33620074633822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113446350-4	22.3721896238054	0	1.35233449162446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167133203-6	36.2221743016809	0	1.33688233307085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16208118-1	2.94542042639618	2.70260356966377	1.35881111520071	1.98894720497232	0.046707030638882	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.16492870185157
Merged-chr5-17858044-2	5.67702895330661	0	1.38209813421074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23430776-1	1.9440543242263	0	1.48872412266348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39435096-4	22.5075241789475	0	1.34683902686533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14608381-1	11.9435372870456	-1.63492980263147	0.592339793182561	-2.76012150702761	0.00577798670013964	0.136737300406134	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04531563433395	1.72632887961153
Merged-chr3-27270389-4	72.008832432785	0	1.34323946880107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61266679-4	40.9243857962295	0	1.34896403049434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4314064-4	56.2248395351105	0	1.33766085111067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64001747-4	30.8569422231653	0	1.3372181730429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53134388-4	15.8911202409675	0	1.33999087304658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32274970-4	21.1219182713715	0	1.33748029254771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-20694-1	3.56781618005205	0	1.83944103902711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4499488-4	12.2302278021738	0	1.3388522149699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100692468-4	17.0349309170211	0	1.33810367893908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83760272-2	3.23550971195545	0	1.53026127837867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46863736-4	20.162292340308	0	1.34612637009061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122138424-4	12.9482657290467	0	1.34213483419123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34612697-4	39.4498901372777	0.00816482237099116	1.01902243624916	0.00801240687206493	0.993607092664667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.06702908365212
Merged-chr5-24044618-1	3.55657677461486	-1.33019875587643	1.44083602784841	-0.923213141652766	0.355896141657578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr1-149911251-4	21.9056563264578	0	1.33623692464114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41304509-1	2.35930445975421	0	1.48405798561802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55660343-4	53.4695743762866	0	1.34007622267628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87910825-4	14.0168005035378	0	1.34513146731251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43546710-4	14.8326782513068	0	1.34168630558607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43641321-4	14.5538596105736	0	1.34365553377344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-123253014-4	38.1013281838997	0	1.33502394830622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-137751711-6	45.1991562015348	0	1.34668755394375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54719003-4	19.92647650295	1.14245357246434	1.09060633701109	1.0475398259608	0.29485067393571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.88866493597531
Merged-chr2-3355947-4	24.768016992184	0	1.3378654260094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67988273-1	3.06958612139981	0	1.49432350602705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90504905-4	19.4820852475886	-2.75056407090419	1.13510679547843	-2.42317646397743	0.0153854510602262	0.271979750953768	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0
Merged-chr12-85701041-4	27.1699303530504	0	1.34437975473531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70506652-2	3.32561363609716	0	1.43070196380883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64928724-4	18.1660820164401	0	1.34304928732899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138209702-1	4.42101439467116	0	1.4522889572229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7257201-1	2.71269246007782	0	1.67895212538256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36328820-4	35.3463348085871	0	1.33397419845584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122251913-4	10.7167403447067	0	1.34767822914834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116598183-4	10.1044252014068	0	1.34520335672689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31562801-2	2.52121017775824	0	1.52664142620766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78086788-3	24.9150828736018	0	1.3382733276974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73128656-4	12.4209716437701	0	1.35122262052105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123149856-4	9.07638993973341	0	1.34919689141452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156459850-4	25.4752740552936	1.74970285885292	1.22043037674101	1.43367691610993	0.151664482598858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr14-47395880-4	26.9814640024869	-2.74877673952988	0.400375008781592	-6.86550528689306	6.62563109394237e-12	3.18728035960720e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.91640731652864	2.55590195716748
Merged-chr17-35210331-4	42.4804964354226	0	1.34733291217718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91522686-4	17.4944774931657	0	1.34579593102218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142367591-8	66.5124299144679	0	1.33994327741701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21863739-2	4.69640026274876	0	1.48870351812924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67596788-4	48.8745129423193	0	1.33451256143538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118709904-4	18.7870879075364	0	1.34381767908202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-6417886-1	3.85795902119666	0	1.60307953343593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6192094-2	4.53080661366236	0	1.46141566470871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46081009-1	2.42145766498813	0	1.43113275730581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135731449-4	12.765867535491	0	1.34377470879929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105340013-4	29.3760220068383	0	1.33547966608383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24419489-4	31.1029204691047	0	1.33650677130841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3627189-4	26.9657654068985	0	1.34290022353623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35813375-4	41.8587466127955	0	1.33827920929418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19630274-4	43.6717366938924	0	1.33516035912492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35136801-4	31.5057325224	3.91914028555843	0.515614392360208	7.6009132864168	2.94048101098107e-14	2.62035421763803e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	6.08267909995652
Merged-chr3-52502361-4	20.0918722711617	0	1.33940751218455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67069422-4	23.0015848272089	0	1.33773704078367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56207685-2	4.17483241205701	0	1.43507389258394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71936936-1	2.61397528800812	0	1.65039355598965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121745730-4	16.0074258657117	0	1.33820001236007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102883499-4	14.7376558540702	0	1.35326447635705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114694599-2	3.6000184910554	0	1.45451409502616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28917970-4	51.479543564492	0	1.33561959620634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113999607-8	65.6762052112173	-0.459262371803812	0.238115700742832	-1.92873619996953	0.0537636197931413	0.619706659952368	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20450390132493	5.7503040850585
Merged-chr17-80445957-4	14.540721178506	0	1.34654280178418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80166927-4	28.8727393121059	0	1.34878319015762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113490684-4	29.4385847014361	0	1.33845102180622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-48831511-1	3.30969055565628	0	1.5408227975615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-131910077-1	1.97872794481286	0	1.47055560012809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82240847-4	18.61489263896	0	1.3374308152473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96374402-4	23.6760703354782	0	1.33840225162651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39771022-4	78.3663483447579	0	1.33819801961138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94960207-4	14.4453273708742	0	1.34094628752514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11513251-4	21.96576073542	0	1.33548630901998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83700824-4	17.9546076734403	3.93303289888638	1.04406668874231	3.76703226076883	0.000165199660296553	0.00887023746538763	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.88804970426728
Merged-chr10-61114406-4	33.2370412312757	0	1.33554080910976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11442055-4	61.1254221567303	0	1.33284214041038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78265371-4	20.0700696063096	0	1.33924470599987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58067962-4	39.6288560887986	0	1.3391039004016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35021998-4	17.1354864927466	0	1.33591874751375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122928993-4	12.4676019041792	0	1.35428268539423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27537422-4	23.0349237309617	0	1.34313561212546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110676834-4	58.1442280388079	0	1.33872772456082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13986693-4	32.2730323377358	0	1.33796604558912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72107288-4	31.5171694299335	0	1.3335879936825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5302338-2	6.3256973885504	0	1.44619723229491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88008904-1	2.711206868279	0	1.44461518472567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146079410-4	22.1943673428427	0	1.33661993743575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40637848-8	99.8590479841313	-0.379031909710969	0.200073993644726	-1.89445865905001	0.0581641567299121	0.653523231848138	C57BL6J_F1_Control-BALBCJ_F1_Control	7.23562701953965	6.83782865114819
Merged-chr9-78532690-4	19.1108987036546	0	1.33919480811374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18976399-4	13.8818241563217	0	1.34121198180182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37314574-1	4.96895727522002	0	1.39340098200737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40598085-8	50.7103979903809	-0.390624009488081	0.207529789431031	-1.88225512375368	0.0598013844267459	0.664909686245342	C57BL6J_F1_Control-BALBCJ_F1_Control	6.38035192006759	5.94951498306479
Merged-chr13-8713601-1	1.35605991513155	0	1.668739197314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83544452-4	22.7717390525371	0	1.34296051807478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88139008-4	22.7180313325272	0	1.34004939935141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62527649-4	17.4531712916333	0	1.34865508723591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34371883-4	13.346403104522	0	1.34091120444864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40998695-4	23.5273728489419	0	1.33832593125676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44702280-4	26.4639758406759	0	1.33626977325061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17181580-4	35.7897323389008	0	1.33637093249041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27973301-1	3.11264233791438	0	1.45671444729214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13587221-8	147.466654351961	0.144267556329818	0.176245570282045	0.81855989968399	0.41303755370801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.98807599769999	7.13075249613798
Merged-chr13-5870520-4	25.3977346943536	0	1.34153563506733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58928135-1	24.6952028785403	-0.341580038613453	0.389631604553881	-0.876674362708729	0.380663535682073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89597872466619	4.54588034053798
Merged-chr2-153156004-2	4.24233987614626	0	1.3996459749065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19418205-4	23.9666240957064	0	1.37527116303521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24933907-4	24.7575907101998	0	1.33872223926206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60973795-1	7.63960709535828	-1.28136340951775	0.896655324082955	-1.42904790179911	0.152990465987761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43227213747251	1.30064958020929
Merged-chr8-39619044-4	11.3576819114202	-1.31267410235823	1.31388021853404	-0.999082019685816	0.317754960492112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr18-80690140-4	29.6456938523653	0	1.33567352881623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131357972-4	31.2004839548277	0	1.35423794556862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100168777-4	22.0949923031976	0	1.34139443166855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183623503-2	10.040133126238	0	1.37931789239304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65227846-4	21.1012594270088	0	1.34224694158405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167805935-6	31.4104987052967	0	1.3380018761781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100409446-4	50.2941615869595	0	1.33754743653744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25284620-4	20.5600907982219	0	1.33936001189427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113572212-4	13.4013078359854	0	1.34349468123774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21336398-7	55.4994877918686	-0.582661893770928	0.26311459372548	-2.21447957530948	0.0267958062090831	0.393894836750607	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04286614993905	5.45917578592055
Merged-chr3-144697312-4	20.9531929582213	0	1.34866259225162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167353821-4	17.5903249598325	0	1.33923161626734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15695773-4	28.8574611957953	0	1.34004977647475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86494040-4	22.8986606718992	0	1.35025770210432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-94079298-4	13.7997165925259	0	1.33963186465875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53231217-4	13.5838460101078	0	1.34658382356092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52477606-4	29.230815153453	0	1.33872916400457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-139042138-4	17.4201220975877	-0.224703960387174	0.721359968668339	-0.311500457673007	0.755420195009631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	1.85449916425446
Merged-chr19-29393542-4	17.4140942274454	0	1.34048510871168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96496916-1	4.8057623336885	0	1.39008644696953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32197887-4	22.8726142096806	0	1.33991707853015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25711327-1	2.88855699413427	-2.53388845089433	1.27937769709563	-1.98056325090441	0.0476402735541619	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45327344926554	0.303163067301871
Merged-chr5-30651663-4	25.3245773218267	0	1.33969012015479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31081432-4	44.9888567996508	0	1.338076173937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8597164-4	41.3173934291634	0	1.333220032078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5035923-8	36.5622123220623	0.0762418617776633	0.255941533239986	0.297887805908291	0.765788795165266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45647093197531	5.52747630204117
Merged-chr2-34977371-4	24.8188829065184	0	1.34672178606172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-29291182-8	86.9623668690452	0.559498132201706	0.241340651473436	2.31829212685824	0.0204334500156452	0.325253853411554	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32746039490774	5.8819954295524
Merged-chr9-13634558-1	1.43044833077128	0	1.69973902844521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63046578-4	66.3084315236343	0	1.34012244300263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44956441-4	52.8205630786308	0	1.34361398698072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26541546-2	14.9723214270897	0.891866063910484	0.678451288401511	1.31456167768772	0.188657256621119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23285743666231	3.33700718126192
Merged-chr12-116441866-2	10.8316529196636	3.90427462818751	1.08397992666682	3.60179605926185	0.000316026247949877	0.0151761355162408	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	3.36624357861886
Merged-chr6-42299554-4	27.0101549535839	0	1.34327395167616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135981669-4	21.627954152372	0	1.34400554003368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139409556-4	20.4372687968375	0	1.34786628347924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29418085-4	25.692599950949	0	1.34598882810955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5316706-4	14.5578984500945	0	1.36042821887807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123923489-6	26.9730021380248	0	1.34023623952536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137079978-4	41.3688329549465	0	1.33484498737568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119101646-2	6.14461523600537	0	1.51839008906571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61022658-4	74.0949066887653	0	1.33497952123212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110974913-1	2.71556475019569	0	1.47237286786605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85977891-4	12.3281410542908	0	1.38124094100482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97505962-2	4.60003899267969	0	1.46269702160075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62858614-4	35.0978588417717	0	1.34134926822213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-4356-7	829.024933355736	0	1.40132850437866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115423908-4	16.910704194832	0	1.34001355339343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8912148-3	10.7948171256211	0	1.34793835367782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132085111-2	3.47690667828649	0	1.47080734271161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75773694-4	10.469964526027	0	1.33974795376634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45361569-4	12.2758971419775	0	1.34831916871224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65245887-1	1.9622166295554	0	1.80238232808754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124013063-4	21.4859937609624	0	1.34222558052814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43363063-4	24.2485460063852	0	1.34098887540131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124282211-4	20.7021654143366	0	1.33870241514727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94566248-4	16.7672992519035	0	1.36144100335754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50545547-4	14.6177649963669	0	1.34430793671136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101841429-4	18.5883514386172	0	1.33560475148747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87511167-4	20.1732629370072	0	1.33503727215415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26835850-4	22.8135309696946	0	1.35072986793378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48878754-4	47.5519563569346	0	1.34037889598304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88648288-4	20.6533285602408	0	1.34760582735971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29624130-4	18.8417889188791	0	1.33477083832955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52722810-8	64.1632638974912	-0.508660424221685	0.241159314233813	-2.1092298501418	0.0349247465286489	0.467604506539613	C57BL6J_F1_Control-BALBCJ_F1_Control	5.99665777548369	5.48639418247199
Merged-chr3-98025678-4	17.279699559298	0	1.3411439327711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33418092-1	3.31086079016123	0	1.42628800488792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50779583-4	21.1707262739357	0	1.33915494187972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166471649-5	25.7524386939363	0	1.33850164379958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17839788-4	38.9275954016676	0	1.3359316977511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87303693-4	16.6047196105668	0	1.34105387291211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102025426-4	79.2415848939444	0	1.33941656597632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57500990-4	26.33960258899	0	1.33321532276213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120882367-4	24.3604852757417	0	1.36069507859921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115682980-4	11.4731432845907	0	1.35539292117147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77522172-4	18.7884252970495	0	1.34090173472032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112895174-4	16.46300891874	0	1.34748085747675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19628368-5	43.6405239257115	0	1.334765666667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115108148-2	3.39609548195366	0	1.47758317817041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25634514-1	3.13489272250356	0	1.4167822829131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80746909-1	1.62993005771518	0	1.57347899305719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25493700-4	28.5125250590675	0	1.33816000943102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99434462-2	3.86858618467134	0	1.59786820574527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4070952-4	31.170203628558	0	1.33349450755092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133511647-2	7.15632788567615	0	1.38097833845242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109247084-4	34.3417998425622	0	1.34818316344458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-37814446-1	3.3901673035117	0	1.39393846355383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88509203-4	48.5539944530883	0	1.33649828747763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-93005869-1	2.58146134792325	0	1.48701775135127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65150051-4	57.1671267401865	0	1.34309150735369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81112740-4	42.5880099239654	0	1.33650308147372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104410731-4	27.7071205309762	-0.0358435758521162	1.02876654046108	-0.034841311845204	0.972206278526209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.02674429890598
Merged-chr3-147071156-4	15.1496662279381	0	1.34005912315669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85571276-2	4.17093172100897	0	1.4526375574979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120279066-4	18.6018184344622	0	1.3419097063396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72967140-4	14.4609923359856	0	1.33930452588993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36133792-4	27.3383178545325	0	1.34667615503291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120786579-4	11.1579563050022	0	1.3479125152612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102752033-4	19.5567553325795	0	1.33975601381575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40558805-4	28.8639586517873	0	1.34301419919873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51907893-4	27.6386305989654	0	1.33342350209454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112897105-1	2.72111884673676	0	1.43644859586948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83538407-8	99.9727857614506	0.1001279461284	0.202919033823171	0.493437920740613	0.621703193786156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2573624986687	6.37352421709716
Merged-chr10-96035239-3	28.5579002493413	0	1.33482228086306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166204361-4	30.0982327030749	0	1.33749134534744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45752403-4	9.74485318782459	0	1.34818084572895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71274487-4	40.8828363528817	0	1.33781205466692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146764792-4	14.0141811703137	0	1.34300427611789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65546460-4	19.738024665348	0	1.34043567469595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40156309-4	14.2832578732587	0	1.34608651311545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21034137-5	55.3062192161899	0	1.40934900905181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128654982-4	41.6538627154067	0	1.33646139677178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134004158-2	5.18783744576385	0.838802318253619	1.07328900549313	0.781525119479098	0.434493708589347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.93688050588922
Merged-chr7-81835627-4	18.5994186322138	0	1.34753594495541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13304236-4	20.0882169441324	0	1.34111193903091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100443709-2	9.60480349028885	0	1.36222085422909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29518677-4	65.7258423268143	0	1.33959761277333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-11905335-1	2.87388700340768	0	1.57357625121339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99353311-4	58.5556458860902	0	1.33995548974606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144215461-4	23.4158281485675	0	1.33994076930959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107830060-1	4.58514472747125	0.119244762302849	0.808809277633054	0.147432485754631	0.882790665755421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	2.41839025556221
Merged-chr8-70833275-11	104.112478088082	0.18126712531195	0.238310400769686	0.76063455361789	0.446875375214223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.79435304246275	6.97309597176955
Merged-chr2-31062401-4	13.592321073771	0	1.34284899614249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86779083-1	3.5055874757429	0	1.41772700620154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79197215-8	163.147136882971	-0.136096337139551	0.175175296759481	-0.776915122492493	0.437208848553915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.55823615145806	7.46731611816998
Merged-chr11-103984284-4	49.1928387910388	0	1.33564713145517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84143313-4	17.0811714588134	0	1.34530248413527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39590388-4	20.4983010753145	0	1.33785313382461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91065074-4	21.2067962164374	0	1.34118625345607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-66848644-2	3.42967087139635	0	1.96536069053379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115600012-4	17.5643803122093	0	1.35077054453047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29808725-4	43.9699070587629	0	1.35766599522774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83045751-4	30.6078184109068	0	1.34621383789242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113835204-4	20.8092596471622	0	1.335794363242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80145740-2	10.6958781455076	0	1.35642352099263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85937141-4	17.3355494680356	0	1.34750048907292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3683191-8	102.210973088272	-0.0534306338509487	0.211501930820934	-0.252624804149826	0.800558160659845	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.69464256382672	6.63436986878234
Merged-chrX-77433629-4	24.9359870380275	0	1.33750151157637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145813007-4	48.7361361061044	0	1.33846942044237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122719218-1	3.43274684830385	0.61930344721923	1.42005226356759	0.436113136894946	0.66275464627547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr1-138158560-4	22.9456029982061	0	1.35140021901139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94589556-8	112.034686707773	-0.0439712599576251	0.198364246724569	-0.221669281050833	0.82457134536258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.90146171115039	6.8405935445733
Merged-chr15-77800729-4	55.4876833683019	0	1.33482724706399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-38012324-4	29.1039935164529	0	1.33493984614476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80496561-1	3.62424483864973	0	1.4235547448137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23830486-2	7.64889152343936	0	1.36283376982706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10924620-4	35.2270051807892	0	1.334587184363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-195241661-3	45.1156437671382	0	1.34928062364876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80177410-4	26.4368271892909	0	1.34058703177092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36719460-4	32.1066557025335	0	1.33593213309096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16086738-4	20.8575393504464	0	1.33889980725826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90673509-4	19.4343434635086	0	1.33726917781327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134102861-4	17.1274755427164	0	1.344378058462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75770909-4	15.0308835227505	0	1.34592540461497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31008340-4	19.789466449725	0	1.34080220878407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124050465-12	91.7078007331905	-0.0300103325715028	0.200110208274158	-0.149969023721107	0.880789054319832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.73638665561781	6.70244443256139
Merged-chr6-116198139-4	37.5342698383475	0	1.34126828257262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191073291-4	92.4120868237125	0	1.34005734717679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5786689-4	26.7272914908278	0	1.33704541309556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74369133-3	16.3062559675406	0	1.35062908495196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31930593-4	18.7299477595867	0	1.3451418513447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184675880-4	15.7942984136715	0	1.35062810233074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64360294-4	24.1257251760036	0	1.33897836545045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125189054-4	17.9283846477877	0	1.34519558543598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116237591-2	3.9843156586481	0	1.4275930129858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117953111-4	21.9738533821742	0	1.33478351284766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91741115-3	21.4869769127456	0	1.34459152909846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23076690-1	7.02628670400497	1.430136811119	0.785421341973113	1.82085300550435	0.0686292044260984	0.723923170109872	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	3.42860125366299
Merged-chr9-105459174-8	116.597599997902	0.544628256068849	0.203626118467396	2.67464832197375	0.00748076771415736	0.164301839262174	C57BL6J_F1_Control-BALBCJ_F1_Control	6.80024791723719	7.337639515105
Merged-chr5-24750869-4	18.8658150797991	0	1.33858018022596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26647050-4	21.1316059263609	0	1.3377993023433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165983179-4	39.8135744131476	0	1.33726513847209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41480207-1	3.3887327706668	0	1.43736166973146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43648500-2	5.12516224756897	0	1.4439226154945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46485831-4	18.2057537862502	0	1.33918308237888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14112958-4	15.5261857801557	0	1.34021036195661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166235101-4	14.0816746513103	0	1.34399085253295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141239547-4	13.3726991780128	0	1.34765861546458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193894284-4	24.404407437219	0	1.33919719333538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167435091-4	16.2340203555163	0	1.33840356841702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72411479-4	18.9439987209696	0	1.34104516134566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36217169-4	25.1846076052004	0	1.34190569134591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26514881-4	15.3773994559115	0	1.34590106062082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136142112-2	9.21339641298901	0	1.34401074246057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113333230-4	14.5708725946216	0	1.34066813745291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108985049-4	21.122897178836	0	1.33908141149106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28037825-4	24.4133716489885	0	1.3414483449616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108766298-1	6.45883929766403	0	1.36782721930483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138292245-4	16.7346619219155	0	1.33964096894243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56615455-2	7.67239353736818	0	1.35490373826908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86440704-4	16.0582114997914	0	1.34413820952352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115902493-4	18.9301826013122	0	1.34224965435794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166719476-4	20.475164861763	0	1.34569147539255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39781902-4	28.3606073375397	0	1.33296690827685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99260121-4	15.8427864749135	0	1.3449979376365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5006768-4	17.6399861701428	0	1.34011680270709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69143204-4	25.7107806081173	0	1.35104602812866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115209367-8	58.6020382953715	1.00414552277917	0.210537779537525	4.76943152428469	1.84746527970195e-06	0.000211423926609092	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60167773542919	6.61559032205539
Merged-chr6-83043562-4	12.1631072403342	0	1.34203364106046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59653003-4	31.5894674473563	0	1.34163562164776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82849053-2	4.67457890876624	0	1.57239475966805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25473159-4	40.421651749023	0	1.33541326959337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69184288-4	17.9599998111962	0	1.34118680726058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38374483-2	7.39902144472067	0	1.64024558147056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31033934-4	20.9645642194044	0	1.33720763923717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54405413-4	15.5909301705963	0	1.34528401453495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31082859-4	24.2957921295813	0	1.33520083507522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152526431-4	17.9793630385357	0	1.34498357810184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34442245-4	22.6683640022105	0	1.33564542117089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90489133-4	20.925833036079	0.927866928549138	0.728395174604953	1.27385100958744	0.202716223369828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	2.23659438538296
Merged-chr11-101587876-4	21.8759561947993	0	1.34398661412363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115429648-4	31.7517753735609	0	1.33641722840917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98786679-4	21.7272681471837	0	1.34379565934615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39636204-3	7.41643436838547	0	1.37460449786069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81129299-8	33.3077358415987	0	1.34214534754514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96010938-3	17.0691048906418	-1.0947764234719	0.669594740531384	-1.63498360605864	0.102052484355738	0.923347369689339	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52921369450234	2.08893859198756
Merged-chr5-125292082-4	13.9618657133632	-0.919990106819027	0.994115848077443	-0.925435509954126	0.35473941482865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.841757702988201
Merged-chr1-191086763-4	17.8412631388287	0	1.34629415821255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71042107-4	15.0727457169182	0	1.34360601146361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32171133-4	31.3982609779528	0	1.34325298326834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35038952-1	3.17945837762474	0	1.39779514428037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35756686-4	15.7426294550129	0	1.33925299074848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5195555-4	24.6084651329093	0	1.34061430999924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126548071-4	29.1819807829313	0	1.33765572258769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53536304-1	1.35868614948673	0	1.70165251573207	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51529051-4	43.252586669463	0	1.33824582688012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121748151-4	18.460763241985	0	1.3647670256657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78087291-4	26.9045168615165	0	1.33996692584409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79287309-4	54.9159467395138	0	1.33887549379992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30935919-2	3.00844657535592	0	1.4972188224791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83044019-2	6.90847987916564	0	1.49157258048862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113124964-4	28.397389020334	0	1.3476921729438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15727096-2	3.41487275787386	0	1.50966778417463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45801564-4	11.828892231219	0	1.34158855935067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31405944-4	19.2981089142928	0	1.34095648397787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81836635-4	22.6898972652646	0	1.33509237776951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80170078-4	20.6570212534176	0	1.33963480183486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37427379-4	34.5740602679232	0	1.34118924047037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-95935215-4	40.4907365674651	0	1.34082537075246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59887589-4	16.9062272211542	0	1.338332209245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112131381-4	23.231200157585	0	1.33813088324167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78451580-4	19.4614911617285	-0.00910960194883188	0.508952466945507	-0.0178987283498269	0.98571964348223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68739901532075	3.24400298568998
Merged-chr10-56582217-2	4.11601516066241	0	1.50944844162561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27191998-4	22.4534476511198	0	1.33498129737902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142929287-4	18.658425696032	0	1.33660452901867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42269598-4	26.579976895355	0	1.34099040602097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11249963-4	37.5092227716006	0	1.33652206040373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72538301-4	24.5487437735823	0	1.34254403662647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72025677-4	24.1132425195014	0	1.34196597850878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148221092-8	90.6795426884889	-0.124347809574998	0.227304729609222	-0.547053331396906	0.584342093066504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.55064648108603	6.37548954198915
Merged-chr3-109129936-4	23.5270803218239	0	1.34071687209371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163453447-1	1.67736838301059	0	1.56883281051167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158233344-2	3.35205025958037	0	1.53464526895125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14559598-1	2.17781411977171	0	1.45854643007492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24103333-4	16.6820594315926	0	1.35355168351049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36115379-4	10.2992791430698	0	1.35756064782797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59187550-4	11.8024396033854	0	1.36176629126693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45032338-1	2.30322256105362	0	1.65660231270338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145371014-4	12.7375629372067	0	1.34393973710719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118820085-4	19.662857581601	0	1.34604579781356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-27208-1	17.2185770508873	0	1.34850834693936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60113897-4	20.3310281043529	0	1.3394332417606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81571008-4	15.2434437287629	0	1.35041067282514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79357205-4	29.3480066061972	0	1.36111914522798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49013197-4	18.5329422302817	0	1.35120139607037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131513482-1	4.73526841870648	-1.56491826162614	0.770266539648907	-2.03165810933374	0.042188279528453	0.526067892865036	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65525490554892	1.98728899046489
Merged-chr6-148577859-4	22.3341817244152	0	1.33650367987655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161897315-9	79.560228105164	-0.289596228677733	0.192118739778507	-1.50738147153998	0.131712905272224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.39298466056746	6.07425489753271
Merged-chr10-122747697-4	22.4456786307012	0	1.34405235128688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55686006-4	17.3439776708688	0	1.3568033859566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25980405-4	34.7207292904709	0	1.33542993524283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38211656-4	31.1581043104085	0	1.3463705175655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100272194-4	14.7491855042192	0	1.35160432282007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86872318-4	18.2253877212107	0	1.33852526134642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56266491-4	35.0220477216511	0	1.33760931680802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100126883-4	11.9944090456886	0	1.3490093402914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11460965-1	3.85083205110352	0	1.38427238658802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113437771-4	31.7523267829651	0	1.34892853582397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6415479-4	102.707874380986	0	1.33507827509159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5414585-4	36.211631041796	0	1.33552920038254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112278840-1	3.85713770449927	1.83171263155618	1.3813423463326	1.32603813704785	0.184827065402914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr3-58470219-4	13.6992147365418	0	1.34582716752388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-76025721-1	2.47529392262177	0	1.49966855985827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117874413-2	3.44723139079971	0	1.44141553211191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103400177-4	23.7520334946046	0	1.34738596620542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41230477-4	18.5966690871052	0	1.33648857051764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82902739-4	17.6571655198781	0	1.34194774912473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11045165-4	15.0555958028215	0	1.34436220976245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61454694-1	2.43673003324123	0	1.59499019413016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91171946-2	4.86003955370771	0	1.39430735683927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128839927-4	22.2699656273365	0	1.33589041492844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117941117-4	14.491547993655	0	1.34290485483717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36038949-4	16.5246622046658	0	1.3470808742888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23884617-4	114.376546239418	0	1.34092118890087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69226171-4	46.4848513522881	0	1.33444799265679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99203653-4	19.7586828391369	0	1.34701183342591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54972088-2	6.89302481663239	0	1.36825100356789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126804251-4	52.6353509351709	0	1.34156917662949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69429544-3	13.8674219367779	0	1.34163995497647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93144258-4	20.556498645604	0	1.33822785332107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37010958-2	6.50178189125344	0	1.41307624406297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34944915-4	24.4593074033053	0	1.3410433463815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-88480314-4	22.5343999892165	0	1.33545383641122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109417701-4	23.4426020176068	0	1.34344683764396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64790835-4	18.8725453790465	0	1.34726479132195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107098222-4	16.2983761038049	0	1.34114774723267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29942636-2	3.904296575559	0	1.51354348001081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11420454-4	20.3308206122876	0	1.34001102670092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-28323195-4	14.5616936607407	0	1.34395576149529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146145233-2	7.44090999995255	0	1.43295911169912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9878974-1	10.232622363403	0	1.3653860032952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4797952-2	9.33723517982656	0	1.36837325704044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3880623-4	24.0941536616952	0	1.33490892483862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73067142-4	20.7366069796146	0	1.34494985599389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47263858-1	3.50275404110563	2.4130283990673	1.26938726966025	1.90093949793047	0.0573099377811069	0.647539161888005	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.13341594473881
Merged-chr5-122768975-3	8.73724446087819	0	1.36210825893529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46394943-2	4.99475292180309	0	1.43135391235487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55098191-3	14.8807300086543	0	1.34563200776814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37474798-4	15.097850180993	0	1.34013225032514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75196574-4	29.0384259812456	0	1.34075270750188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144138821-3	12.1852547653295	0	1.36937311781509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94221895-2	5.97583001081784	0	1.37194116368437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97187916-4	69.1468371068924	0	1.3361460984502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50819939-2	7.93442617380624	0	1.35404134812635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53268348-4	16.4057408704845	0	1.35153295364318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167092052-4	20.7251439668923	0	1.3424166666598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11385967-4	28.4805124912394	0	1.3361830210485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143907218-1	5.42036884105129	1.20501145111845	0.865128775650122	1.39286946063366	0.163659268931567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	3.03542891054255
Merged-chr18-60696915-2	5.81984700270313	-1.07208565512209	1.32564409128681	-0.808728121045982	0.418671549124088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr6-113660656-4	39.9686728200064	0	1.33501243003532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13666317-2	10.8519063053913	0	1.36401933248952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91702516-4	43.8577238317472	0	1.33777606160503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70354930-2	5.74262672586096	0	1.50361084115263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70985717-4	13.3928034559326	0	1.34227665644809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52567518-4	25.7169487584392	0	1.34401007909253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39674148-2	7.0836244005068	0	1.75556081116706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31061456-4	44.7860186227689	0	1.33801542186974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97581915-4	39.9298506872691	0	1.34328788412215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98816934-4	15.0703818181273	0	1.33811432560802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32305141-2	6.17943651256149	0	1.38630589711756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25009794-8	44.4258602262085	-0.154581816939239	0.264334445122122	-0.584796343389234	0.558684663355304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65423132194236	5.51428131022491
Merged-chr13-4662562-2	15.0620767647322	0	1.33718984222848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-14596210-4	27.7437239596308	0	1.33610454577914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37420857-4	53.8873553620847	0	1.33797356384464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5768017-1	1.8400547437975	0	1.57397819077428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65745097-4	17.9370973714164	0	1.33901593462857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4504930-4	23.4003919756247	0	1.33813118769221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66428040-2	3.2534909938047	0	1.41369983184475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74297395-2	5.97856495389965	0	1.39747346007775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45248280-1	4.30275118196916	0	1.40372796593806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27709440-4	29.6948075751981	0	1.33686764777366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91415747-7	61.8086249534073	0	1.33640605304237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27508159-4	37.1641937379283	0	1.33821223261263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102810523-4	18.0812451403119	0	1.34691004749782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10953035-1	2.7832874807756	0	1.47157771455534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31573160-4	23.3742432158111	0	1.34009604844246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-54929551-4	86.1160583893409	0	1.33571620671266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38374061-4	60.7067944870907	0	1.3384135472668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139224945-8	53.9255377622616	0.541291163759085	0.262668171552279	2.06074135499646	0.039327722008608	0.501716883516996	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18913026254229	5.8384892196586
Merged-chr17-36001368-1	2.65133942088206	0	1.56803299237385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_GL456392-23116-1	5.88967070628115	0	1.42210935156833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-10109876-4	19.9244736538912	0	1.35376689188861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25861998-4	38.9123743092512	0	1.33195354830538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134205820-2	8.54418628355556	0	1.42692375361339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60843255-4	26.2278191453282	0	1.34025573825047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29239707-4	20.0581758232222	0	1.3479809771655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132339929-1	3.56840188933246	0	1.39899488579938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107798340-2	4.77897801484642	0	1.43211991319026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12868776-1	6.04038509774279	0.0407557805328468	0.591516617559236	0.0689004827979587	0.94506883421717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99910770274642	3.16514633513771
Merged-chr7-19817616-4	43.3045544955417	0	1.33624086200487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41403994-1	2.43888243970379	0	1.60973520557362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-57282211-1	2.65182818563832	0	1.39923993745088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85344405-1	4.61123433957893	0	1.39169392286745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105225777-4	36.1306226435135	0	1.33698788346099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11231990-2	3.29346326050092	0	1.54107391128933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72429378-3	32.3760602107241	0	1.33686708484249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39166023-1	2.79416408282013	0	1.45781185880562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11140792-4	25.5086901347716	0	1.33632084439691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31247593-4	21.998006199147	0	1.33904388134724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30762066-2	2.88040958544965	0	1.44022974093211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95699415-4	23.8212918937355	0	1.34497266474422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36052807-4	41.2697146022775	0	1.33395765473587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20941393-4	36.360051107527	0	1.33805405598906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27874124-4	20.1522630260184	0	1.34054441114178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148164271-4	15.7194289567249	0	1.34786029481041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17862430-2	3.52572806423485	0	1.95950982392384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26744551-4	28.8371313591933	0	1.34729567022407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151211075-4	10.7767050183214	0	1.34628927427875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44315044-6	54.2348726107319	0.356617223815796	0.224272673591177	1.59010555367912	0.111811014348125	0.974184152740784	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20279095001286	6.58060136145216
Merged-chr5-134232811-4	28.2087517538049	0	1.34159850731084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36631430-2	3.04705523739041	0	1.58555762163673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135203396-4	40.5118352246683	0	1.33949995835124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42419630-4	18.7120458099841	0	1.3512324079369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86972055-4	29.4076326144168	0	1.33748643945763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81350357-4	16.2690013179806	0	1.35065210797163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59448928-2	3.81801404770537	-1.55865163883364	1.47131042736665	-1.05936287124894	0.289434552093586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.41385117919798
Merged-chr17-33563903-4	22.5508779790704	0	1.33606508951173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16046863-4	31.0238934584348	0	1.33709534121408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19898210-4	14.2722101290472	0	1.34340821816457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54161019-4	10.3207348620162	0	1.34210761326964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47220037-4	27.2059042801723	0	1.33933735948953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90238001-4	47.4144563420465	0	1.35518510462827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170317034-4	28.5027765639173	0	1.3328195951546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26640657-10	138.99868185618	0.220028981158181	0.220186742687985	0.999283510315481	0.317657371136529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.40928551737013	6.67191546829276
Merged-chr13-49205992-1	21.3381676290873	0	1.33705033254062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9140417-2	4.71238995166121	0	1.47133913956321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52513846-3	10.9144810211651	0	1.37508863840368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54736304-4	21.2316625195667	0	1.3394960070201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43558027-4	33.0714015135111	0	1.34458759899818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101830532-1	2.16670765566332	0	1.51564966094473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150566413-4	33.3226305040261	0	1.33479497603686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43849447-4	27.6032836610888	0	1.34990067662859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120363372-4	17.9011749083511	0	1.34727093753638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5518132-2	4.39317669635756	0	1.51745490846675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97517974-2	13.8561706344478	0	1.37216486351183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3463218-4	25.6601091356999	0	1.33906550417964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132710675-3	12.3319903638508	0	1.35270624047006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27161940-1	2.23072685920214	0	1.52027485394444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136898930-4	13.0201062000132	0	1.34890772605788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80109104-4	19.9935521916992	0	1.35819114995469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51611865-4	14.9641580919768	0	1.34149408454119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59186593-1	2.30128632121808	0	1.4566550646825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58749279-4	17.2234917650358	0	1.34847806642739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59041212-4	11.7892485544213	0	1.35080025917366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62842707-4	28.2631286135709	0	1.3386812437498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84335668-4	22.5922125201631	0	1.34106036687733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113672610-4	43.1974815473771	0	1.34010868730224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146806476-5	44.4674608978086	0.328412501271497	0.219349830144399	1.49720882416595	0.1343389300185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.25107305704573	6.56369917340708
Merged-chr2-52959246-4	17.5215187683283	0	1.34128078177105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7868838-4	11.9590139835928	0	1.3444866224898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64590692-4	31.4510921866627	0	1.33993948940918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128333101-4	21.9109675090936	0	1.33714800119994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105023574-4	40.6731441207804	0	1.33334973938742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-20550553-1	3.18666507247397	0	1.40615157394665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99173079-1	5.27205852770524	-0.670429511782455	0.768349536345251	-0.872557970128329	0.382904057861813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33145287800324	3.01910099141111
Merged-chr3-95645474-4	25.7261729956261	0	1.34936813089765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78868328-4	20.1665582674746	0	1.33578467417853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_GL456392-22755-1	4.05540530173566	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85490124-4	8.33376772430839	0	1.36413125185158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-9653649-4	15.3658240683766	0	1.34860597542968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42392086-4	23.4088008940095	0	1.33565028723289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58423374-4	31.7432908659793	0	1.35775583452543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70544277-4	57.5036511279641	0	1.33517854719437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76179634-4	52.2076507013196	0	1.33558804437099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130205691-4	13.1402387828941	0	1.34334127494056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145306831-8	175.858653231523	0.426965739714296	0.154523326448362	2.76311512007852	0.00572525696228992	0.136141401230585	C57BL6J_F1_Control-BALBCJ_F1_Control	7.47786624450631	7.90072038452106
Merged-chr1-20941569-4	21.7119623571552	-3.78220385162973	0.553737806115658	-6.83031537644324	8.47281572125335e-12	3.9540408406675e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.7418921789212	1.86479359409142
Merged-chr10-118814965-4	16.256966447136	0	1.35014725789016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22313441-4	32.4567195146192	0	1.33685895247923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51195459-4	60.5411482572927	0	1.34024984134335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112760725-8	69.8527914383431	0.176543827250212	0.194832369200672	0.906131912138154	0.364866036177775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.21977746355419	6.39934439057996
Merged-chr8-46886381-3	29.42607553402	0	1.33750387526283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-88487932-4	21.1800857910208	0	1.33695181658027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122702383-4	35.6089912275319	0	1.33431817243863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112629097-2	20.2865281264137	0	1.34247881383583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69624598-2	3.19022449127529	0	1.48201221454977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123915026-1	6.26972118156833	0	1.4286661530322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3186832-4	37.751822890595	0	1.34368097365849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90576427-4	15.3709704270235	0	1.33707622441208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108848407-4	43.5572732022051	0	1.35506623877932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94370253-1	1.76577856992259	0	1.60857295188351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27329532-4	20.941218681299	0	1.34065514738489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62464220-2	4.92921941348885	0	1.51773308304513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99381143-4	12.9687029583278	0	1.34823053665139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77545107-4	25.5114741294319	0	1.33717039229472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86665996-4	14.1681879131952	0	1.34408440159585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111942097-4	13.5475606980439	0	1.34238193057862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130075956-2	3.24468302972134	0	1.4131653960601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113777057-4	35.6099400964531	0	1.33964326124397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12875044-8	173.119876175735	0.0262484647786348	0.164721601376497	0.159350471093587	0.873392758541317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.67600283924082	7.70706803714105
Merged-chr13-37779571-4	17.2387387888759	0	1.33826089951795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191280876-8	81.2325429474623	-0.210321493079115	0.21823964509215	-0.963718086098923	0.335187284232477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.52182626206216	6.28818979282582
Merged-chr16-3714936-4	30.0543555047795	0	1.33871530211005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65930056-7	80.9687881030058	0.0168027623131649	0.279991524712892	0.06001168189071	0.952146330657158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47324352702648	5.5406958114231
Merged-chrX-85797716-4	29.1709113236264	0	1.3399959155893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64100341-4	26.3642999711631	-0.836738120582605	0.403624411213444	-2.07306123548638	0.0381665810396579	0.493015457209347	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3054299345056	3.54554968738241
Merged-chr2-77342138-4	17.3323460272662	0	1.34087173514526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122811474-2	19.2326059475246	0	1.34027522780322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32311231-4	17.2871109556112	0	1.33901437243857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88113413-6	72.3054094266122	0	1.33516523084422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106628452-4	14.8973318248319	0	1.34559391922524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66856099-2	4.05162955210109	0	1.42832823013018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43679751-4	29.5585521790328	0	1.33773197622173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33847803-1	2.57846200185113	0	1.56449522017833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99268976-4	42.6667340315397	0	1.33889301572803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85374929-1	2.01238989252479	0	1.5201846783827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8604972-4	44.6441485891525	0	1.33332829651756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34715582-4	50.2149196545524	0	1.33455031050584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64083344-4	33.9395819995085	0	1.33287571302626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77386536-4	14.9447496110192	0	1.34605026213684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36999780-4	11.2162336749392	0	1.34758854878046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77536894-4	63.0398504946113	0	1.3337466751976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84811076-4	19.1452102440612	0	1.33724381250442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112668150-4	22.018593826985	0	1.33955975082276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53855894-4	28.8312170221745	0	1.33192768396429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24374079-4	23.1914187652873	2.07456147050043	0.871657186488929	2.38001992372351	0.0173117020174317	0.292490605302428	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	2.34706616758795
Merged-chr10-94474400-4	37.945945681279	0	1.33516202743403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58552260-4	16.1755800900325	0	1.34655169755819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16161900-1	14.7255687955259	0	1.33742766269074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-78909442-1	2.30029384715895	0	1.45665709157917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38350180-4	74.6669830770491	0	1.34025175456918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114249459-1	1.94287105553283	0	1.60235000803356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83276447-7	79.0533612763144	0	1.33342771911726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11300573-4	18.3372233354623	0	1.33753157870279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141869754-12	103.281495138794	0.04003039653841	0.235466181451837	0.170004865631194	0.865006310134098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.91016424915411	5.96883820058732
Merged-chrUn_JH584304-53481-1	2.52767720272842	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52078766-4	29.0626433113729	0	1.35051386179896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-99104680-1	3.3719178492925	0	1.41634608494088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36073364-4	26.0437665232644	0	1.35923864955609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142577304-4	17.7858355424003	0	1.33832988582759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104256653-2	5.6222344725613	0	1.49609691912642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79498870-4	60.4703103590253	0	1.33538582925342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126852342-4	32.852134095503	0	1.33505019478724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36029465-4	17.0139388082495	0	1.3436028576615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58402384-2	4.19393068569838	0	1.5803736720104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95162506-4	26.2043596485285	0	1.33949311937505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32336096-4	16.4385836611025	0	1.35211923465387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15765663-1	3.69038879728456	0	1.43978612781184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45050065-4	26.836907479309	0	1.33584024282912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25703960-4	23.8071067893166	0	1.34454991196883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8875392-10	150.551721256402	-0.522824675170254	0.191057474089965	-2.73647852647767	0.00621006478447983	0.143323371454419	C57BL6J_F1_Control-BALBCJ_F1_Control	7.65205381064388	7.15382889628819
Merged-chr18-39519647-3	7.66665612118333	0	1.35140948648575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68160023-4	39.3103064440064	0	1.336446700882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19370824-1	5.24205276896285	-0.376529233367202	0.943059230531348	-0.399263610574125	0.689698977093185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22299259577626	1.610618888618
Merged-chr4-3700198-2	3.48162190825256	0	1.55594921313865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43794617-1	4.23144081124269	-4.14316264826934	1.2135857409681	-3.41398428508584	0.000640202683222775	0.0258357666349716	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39866631390539	0
Merged-chr5-105150985-4	14.5027185039948	0	1.35461464144171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69015371-4	30.9935796938173	0	1.33605241429845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21601267-4	11.3250665161548	0	1.35697008836321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120058827-4	41.4553013093471	0	1.33946093127264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64355446-2	3.42521706233421	0	1.43588264185858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39171315-4	16.971470597918	0	1.34256230776517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53931201-4	19.2273209057946	0	1.37323463646764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55257299-2	8.65018777406321	0	1.3768550899628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-32488-1	4.29406237393553	0	1.61189361567551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55312038-4	16.7047741904896	0	1.34701144154213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118700164-4	13.4788412303697	0	1.33909871687199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96177202-4	30.3433009116273	0	1.33583355508084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124051934-1	10.8177690838847	-1.4717799556559	0.537108903083699	-2.74018908866709	0.00614038466604826	0.142582302461221	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25857009345868	2.95399403087158
Merged-chr11-68446717-2	4.73873185458844	0	1.49948657354994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94386481-4	54.0413572855807	0	1.33919769521812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90852997-1	2.03474458371989	-1.16361915600006	1.66217850919987	-0.700056672348743	0.483891912820558	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.41385117919798
Merged-chr1-155139027-2	7.47893699260287	0	1.40484018102985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10676927-2	7.50044316915007	0	1.38862062789345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94405669-4	10.36216150103	0	1.37035569921807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40937294-4	22.1495827455931	0	1.33661361226807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128374264-9	123.026591409014	-0.271907945729574	0.200127464997341	-1.35867381187877	0.174249974136809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.24430592884332	6.98359781417624
Merged-chr7-111976655-1	1.36419566344763	0	1.88086645032632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40924539-1	4.69274889404986	0	1.39412513683413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63278961-4	43.1021864494311	0	1.3334041879263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35870444-8	50.6888148373687	0.246269303508372	0.260851562088942	0.94409748416382	0.345119834848611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35593265163088	5.63320443840348
Merged-chrX-103299104-2	5.9875526366777	0	2.23687657156478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66882654-4	23.3497976430639	0	1.3417336003387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113637894-1	2.44424944939246	0	1.47120204824943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42001425-4	20.5798479975152	0	1.33453027151779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82505163-4	43.8976442342685	0	1.33600198986012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49425009-4	20.8653270303514	0	1.33582359988198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105662088-8	155.791278171711	-0.137309316388369	0.155741008846754	-0.881651643360542	0.377965218512804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.95487507820817	7.84805437480057
Merged-chr10-44625737-4	35.2615802423989	0	1.3445543659127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115119609-4	21.3835100858811	0	1.34273088186633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9180460-4	23.8517419123878	0	1.33929245205005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76762020-4	24.3989364653822	0	1.33944662807318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91438265-4	19.5600505035087	0	1.3360325842513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-38013351-4	16.9808942721715	0	1.3409847222596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8636222-4	35.507968527149	0	1.33706172278261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74957447-4	19.3146177792333	0	1.34086466456491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21411915-4	11.2878629182852	0	1.34076605345535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75502763-2	21.0319514086271	0	1.37900548094088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80569878-4	19.3035588384519	0	1.33924952588868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73804004-4	80.7929483916166	0	1.33636085080112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66953432-4	12.5629309685289	0	1.35872917044974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-36989630-1	1.68307662728807	0	1.66433126758237	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86434543-4	52.3034956228451	0	1.34085815342611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96466141-4	27.1481557763453	0	1.34472405416689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27708634-4	21.7564195169523	0	1.34046604125306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67437672-2	5.6750126912774	0	1.37128800121671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114745344-4	14.1933101683549	0	1.34160012238273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158168723-2	4.37425138446735	0	1.39224136818838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95682819-4	37.8934306360805	0	1.33675595064631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20059087-2	9.72274259650587	0	1.35297975205645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107838301-4	29.372718034243	0	1.33470162748437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143999506-3	17.3841747607582	0	1.34455465206519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102046894-4	17.8130072871083	0	1.35769031766398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121225141-4	19.2861924314203	0	1.34613756359058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52503793-4	46.2882609853228	0	1.3371973102477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28224214-4	15.7084650612048	0	1.34879928764321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101949433-4	15.109732471277	0	1.35076217701009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153299155-4	30.9262545682524	0	1.33492088535908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65931177-4	17.894421969126	0.275295252499435	0.928002723317872	0.296653496355245	0.76673106407047	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	1.40373237117109
Merged-chr15-6267116-4	13.3027620441316	0	1.34619473854286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67422006-4	7.66316755195095	0	1.38852555726095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96351541-4	28.3037392088586	0	1.33332621891655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84273084-4	27.6357998554741	0	1.33713622523032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66743114-1	5.1749768939284	-2.04507752821903	0.910619109498276	-2.24581002846053	0.0247161786893001	0.371145513086095	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74451593490824	1.28067447403188
Merged-chr10-24634434-4	61.498759495392	0	1.33777158417173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116193353-2	5.39621635429352	0	1.74345499212166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118662694-4	87.1211524167413	0	1.3373867891794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91138463-4	32.6734016819958	0	1.33783372448335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86570962-4	14.5365338532183	0	1.35324343593351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128653829-1	6.70297695613066	0	1.36731083150546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120187778-4	20.1396863470247	0	1.34188250159811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86447291-8	71.4894081944502	-0.228816066052744	0.207586463044892	-1.10226872550577	0.270344861574029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.51292284881896	6.25788628766171
Merged-chr5-41739000-4	19.1347792425674	0	1.33617154972216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-2040-1	1.35091643812578	0	2.25607730569616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94365738-3	65.9443695649469	0	1.33944047098025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69669734-4	14.9572941044151	0	1.33901942408505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89896739-1	1.58440820840777	0	1.68412499935136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55853005-4	33.5040134721331	0	1.34178314248716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120516286-4	40.7931349006395	0	1.33809939501072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31279987-2	13.0729225927909	0	1.34339476859403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11352545-4	15.3835575223584	0	1.33962739505119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88259257-1	2.25038990136235	0	1.49817242968514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58481337-4	54.742304942936	0	1.34099433181116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128381190-4	17.0262353511325	0	1.3390709252429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59552616-4	23.7656690804344	0	1.33784121207027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98896892-4	11.013670775506	0	1.34103747324833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19316541-5	89.763142807257	0	1.3403053221233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17001153-4	23.7100097986509	0	1.33594290514799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95297943-6	35.3306764652153	0	1.33275187825934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9038530-8	94.5537909398741	0.221588874304976	0.19520781282695	1.13514347144196	0.256315209909423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.3636922297573	6.56592883026129
Merged-chr5-96980309-4	42.1315127622507	0	1.33419227987391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86074321-2	4.90858932791496	0	1.38454197678098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99902643-4	14.9886220285401	0	1.34418843905741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182503701-2	4.36386140173057	0	1.46336498293948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40681935-1	2.93232960293215	0	1.42895492795482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117871731-4	14.8601788726484	0	1.33803302877554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11119466-4	21.8222478185297	0	1.34376926322598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132332990-2	8.88045523282734	0	1.35745250684399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71135290-4	39.1810511594711	0	1.33895341186225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144561765-4	13.0396511391441	0	1.35109842290563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93032166-4	14.967766963087	0	1.3535429321572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45758132-8	207.080407989958	-0.583680942460966	0.176663795895401	-3.30390807863402	0.000953470896422333	0.034576200439374	C57BL6J_F1_Control-BALBCJ_F1_Control	8.23857522626056	7.6540022866505
Merged-chr17-83861747-4	25.9965252437406	0	1.33892173150099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11461696-4	32.1994013751832	0	1.33518872947392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43951805-4	26.6281316321897	0	1.34126301373822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55113689-4	58.355147030548	0	1.33519932924615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108165101-4	22.9246895236633	0	1.34021752989448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11690405-2	7.38089622797254	0	1.4230302691365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-54013432-4	21.4454582281565	0	1.34256621808352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41003219-8	160.262353005709	0.322446533967879	0.170103035465118	1.89559541419236	0.0580135641312444	0.652658064410519	C57BL6J_F1_Control-BALBCJ_F1_Control	7.70013300629009	8.0442432256988
Merged-chr2-94045735-1	1.88005152674104	0	1.55864294528841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120055191-1	2.66192299246931	0	1.49541537069633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144872196-1	1.88504780897852	0	1.60869367811724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91607148-4	39.2683492378944	0	1.33535501776274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123377494-8	36.0161700187964	0	1.33689041309754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-14603-1	4.43460345212013	0	1.52272965471646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115666810-4	31.0596169860648	0	1.34324611425602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136690261-8	130.612014417851	0.0899697115133579	0.158345378158133	0.568186533512262	0.569908314492336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.18884277385642	7.30814250760057
Merged-chr2-68434725-4	23.4791553739432	0	1.3441806625596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29601580-4	12.4677116202195	0	1.34406282319151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27923810-4	22.5588553974837	0	1.3450828804634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80647562-4	22.6405412540574	0	1.34501582252768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135266083-4	34.0365073971764	0	1.33442617860427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50698310-3	14.8098055249518	0	1.33992925797487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165639721-4	16.9078497160504	0	1.34542366126273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92620910-2	12.0533067662442	0	1.39902847952989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108380403-4	19.3020904341859	0	1.35138853380456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135699471-4	17.8683283021129	0	1.37567678462122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111246463-2	2.97176194098574	0	1.44256700061496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3646015-4	18.3826572723355	0	1.33572326092163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119398427-4	36.411591522474	0	1.34121619799207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98776475-4	25.7253442197444	0	1.3403961051077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48545959-4	60.7329373752399	0	1.33788417080658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120054356-4	14.5682400538293	0	1.34417571887883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90877161-5	25.6622911056877	0	1.34402236135715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84235867-4	53.6896091401678	0	1.33524767348236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166554127-4	17.4437183693027	0	1.34277431676149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65795308-2	4.53085898221361	0	1.49800271321844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3185941-3	18.0161253145374	0	1.35030154158382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36264353-4	22.8216013953646	0	1.33691183106206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103400561-2	8.3802220808232	0	1.38257743731777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97464174-16	160.195851316708	-0.0632947732715271	0.178042413696942	-0.355503904700288	0.722212120201596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.72778962832395	7.66398681182181
Merged-chr7-28375692-4	65.6859339215082	0	1.33514356740478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32950411-4	28.1652987836702	0	1.33995098992793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41153076-4	18.3875260678843	-0.167784359736133	0.658073065787469	-0.254963116497341	0.798751586726217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00345263627502	1.55926189265627
Merged-chr17-10856054-4	14.1050001750483	0	1.34293729330164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35305452-4	85.0231699166645	0	1.39929327063936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-11613277-1	2.55014194273227	0	1.4892615564011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55294216-4	10.981212152472	0	1.34310513429313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63410790-4	30.1699744069807	0	1.3405193203747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65724906-2	15.7039488257985	0	1.34287899570363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138683256-8	79.8435890986032	-0.234738458341673	0.214665021877603	-1.09351051367612	0.274169715397167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.67239455444691	6.41735236318157
Merged-chr8-117288103-4	21.1064635751461	0	1.33467375826956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127981218-4	51.0354505977372	0	1.33340238183982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-101552952-4	23.1419877166567	0	1.34656746920183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126477783-4	30.3732338372273	0	1.3381737658169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70834805-4	39.262698259168	0	1.33990143299166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43778282-4	33.2541963263021	0	1.33896690817046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92415963-4	63.1764459135789	0	1.33628449488937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73537942-4	104.726218437729	0	1.34475230804342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156996652-8	65.7602748034161	0.166976653506381	0.198330785928784	0.841909906847938	0.399838384586667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.16023698330763	6.34402795005153
Merged-chr1-125466844-4	31.9855510139524	0	1.33613343829398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14192273-4	31.885249110857	0	1.3389548256859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84967569-4	14.3182263723007	0	1.35259075379727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95193206-4	28.84840249703	0	1.33908162017753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152903717-2	3.19813088853815	0	1.48620113301951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41587525-4	22.2029383553682	0	1.33804058530911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83269853-4	28.4145876250351	2.67216670352331	1.10921147297217	2.40906875617067	0.0159932846301405	0.277934449875257	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.948471875794396
Merged-chr11-83737359-4	41.1179622458381	0	1.34313194217575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34185684-1	1.70084528856117	0	1.80895331002869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93199088-1	2.65449567431831	0	1.46019747132713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116019152-1	4.74499104191967	-0.413101060383753	1.04135474028197	-0.396695808262126	0.691591791627854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	1.30064958020929
Merged-chr3-104794691-4	31.9201188275864	0	1.33544875399909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97826876-4	17.5205187022414	0	1.34435754980173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43642492-1	6.6163619675861	0	1.39232558342561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25487451-1	6.24011936278866	0	1.35634317170305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43996433-4	33.2724160591636	0	1.34000872557217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70119033-2	3.56127097959156	0	1.43107417920002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46522663-4	39.5220922650556	0	1.33611456881126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51454162-4	40.7751320411725	0	1.33474301368957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41579727-2	8.30802061307129	0	1.40718315857817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125271686-4	24.6530625015995	0	1.33623850929651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75086265-4	50.2036645932833	0	1.34003823505184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55447281-4	25.6618063100523	0	1.34554588745467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-94575107-2	5.10115828846582	0	2.04856585188138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111944310-4	17.2666328987081	0	1.34000618874929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44676720-4	14.2907709721368	0	1.3558135709955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23114635-2	8.27839987895581	0	1.38508346145233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47015871-4	20.1214880955318	0	1.34495975260375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109468367-2	6.06550158418982	0	1.39375987377819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122903678-2	4.39804861787956	0	1.40451268628114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57482452-8	65.8394267908664	0.0635152623823637	0.193119552372101	0.328890894796519	0.742238156721533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.33021141299044	6.39604140337332
Merged-chr11-110358456-1	1.83140447432798	0	1.6213252299914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69366022-4	17.6314379179621	0	1.33989831434635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66793601-4	14.7027272990236	0	1.3429550697752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78557080-2	3.4917858465669	0	1.43289593683867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58744659-4	24.1911880864643	0	1.33875468196584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166757459-2	4.88035878230236	0	1.36953272090172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116664276-4	64.0854328972631	0	1.34201700732065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66555572-4	15.7564360430331	0	1.33844377540735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128536477-4	18.00955630673	0	1.3447832134094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87184082-4	14.7072383085846	0	1.34639772299012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167368586-4	31.9760209312046	0	1.33540693928424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141123147-4	44.7423503743943	0	1.33971030610336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6268936-4	28.253070919376	0	1.33962768863812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99460044-4	43.9322232876222	0	1.33497358036272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88631056-4	84.6556765965453	0	1.33802179127686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17166610-4	43.1246151468167	0	1.33535525566311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83534880-4	33.8125354010974	0	1.3553185963498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74438181-4	37.0528794083947	0	1.33792801218282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67445567-4	29.8437693090475	0	1.33907954040487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94909528-4	33.8264246449223	0	1.33549650403094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88462890-4	35.0860351654237	0	1.33719090703753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81971979-4	39.1509069253738	0	1.3317967261615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120151892-4	22.3855825621745	0	1.33408113503569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16866034-4	20.7980989133996	-2.83372679771348	1.08214032243939	-2.61863155725091	0.00882832428655229	0.1847061916165	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38442592474823	0.303163067301871
Merged-chr18-7693081-3	14.2546455814303	0.321965503488482	0.708801548632458	0.454239277707101	0.649656615676404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6950503635711	2.50339709683576
Merged-chr3-152707703-1	2.68993332976985	0	1.46868572536114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92885637-4	22.954902537069	0	1.33866095693958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31084116-4	53.8189817414568	0	1.3403101750179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76763106-4	21.8817143458575	0	1.34207053355325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85703672-7	90.873002442299	0	1.33562452106867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137371852-2	4.65951003858437	0	1.44809565809855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113636137-4	18.2772637110999	0	1.33775403243316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40381374-4	16.931701045932	0	1.36267812630696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-37255585-4	12.6209911765823	0.840774360883196	0.650832199405012	1.29184505875989	0.196410807534045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	2.83727109338022
Merged-chr3-36853396-1	2.98415507325422	0	1.49134819069979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111933500-4	17.1276666540513	0	1.34078617682931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70395230-4	62.3301971010025	0	1.34022117034717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44686898-1	1.77845073764186	0	2.39539604613244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49196641-2	18.6386504012744	0	1.34765017649996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110164237-4	35.8549996238658	0	1.34173171714354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130073207-4	23.9518797746063	0	1.34072749142675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118408213-4	16.1278292552276	0	1.35383920465595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63738239-4	27.8531029284041	0	1.33561167639032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123924265-4	23.3805691294964	0	1.33997061917479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132573537-4	15.0173815232206	0	1.3495134506434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156222270-3	26.476873721986	-0.488592081113435	0.965218159592627	-0.506198600034262	0.612717237701871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91645818320609	1.88196435652521
Merged-chr15-7115309-2	3.47679956299058	0	1.55000570141661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19418073-4	23.5873961328689	0	1.33839375355762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11455348-4	44.9452656416007	0	1.33443770393932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103181183-4	19.0972410533561	0	1.34329882918327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120453811-4	18.5001011084991	0	1.35846932093225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42099598-8	94.9515536393207	-0.834598395394269	0.231860564428677	-3.59957027384448	0.000318743487824461	0.0152791686548941	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54416144820895	5.7050395814774
Merged-chr11-75644943-4	13.3730080880238	0	1.3389940743722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38346007-4	19.9535005962982	0	1.35323132969848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28180968-4	30.3204652856925	0	1.33808903331008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86427556-4	10.4365245882132	0	1.34544107365227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31770820-4	21.0493112317411	0	1.3454773450396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16015341-4	13.872049295013	0	1.34012207544408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100084178-4	20.4529389848165	0	1.33936369696354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113351810-4	17.8633006261069	0	1.33964019489933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9806105-4	13.8458281452404	0	1.35656243263998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80746345-1	6.13520147018875	-1.39869306253591	0.687104646677488	-2.03563324640479	0.0417871967443518	0.522907511009719	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26924515679846	3.04607352087582
Merged-chr8-120743770-4	22.6615179180105	0	1.34440600640471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18733298-4	31.8708515605687	0	1.34026671187419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7846966-3	12.7652564929288	0	1.3567993896511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135206430-4	18.8107972975516	0	1.34568674122655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61199784-4	22.3953644800285	0	1.33861506312604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88135432-1	1.12846231986573	0	2.11712753399627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6574807-4	17.9741698292469	0	1.34018326751924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92441676-4	42.0575512191231	0	1.33824278609713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38395616-2	10.8494879258721	0	1.34615333732109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118578086-4	17.017094849989	0	1.35748808468282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35639214-2	7.90484191616384	0	1.37097806990328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21540249-4	12.5813253564752	0	1.34822117183312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50736935-4	15.893316132066	0	1.34414263214536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94865707-4	17.2406479228415	0	1.33921477341181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153571983-4	10.1077528135508	0	1.35956928454895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191198127-4	33.2929098538477	0	1.33458454628936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53796986-4	26.9035383786586	0	1.35110946895053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100635259-4	24.7076210403942	0	1.34317900386265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19131612-8	131.163618286877	-0.0580104608298941	0.254208405704952	-0.228200403794768	0.819490447538028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0452252857832	5.95953360559233
Merged-chr2-90501005-2	5.05870424470369	0	1.40372493081516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128004585-4	21.0812008318048	0	1.33663839327555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75425959-2	9.45240011200362	0	1.72108526500569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46033258-2	4.47627413651677	0	2.14633974635896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32693934-3	7.47221957057805	0	1.37829732298397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4528593-1	2.59845617139389	0	1.45967045939865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24442513-4	37.5155706379887	2.14422922786646	0.849593195557432	2.52383050980016	0.0116083881777519	0.222503657600288	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.40799833663131
Merged-chrX-109184900-1	2.39259259211819	0	1.44454773639186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110633493-2	3.9085284160719	0	1.51547915076479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69408781-4	56.5593393488881	0	1.33860235753131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8994996-5	23.3026165589668	0	1.33824666105388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20027201-1	8.15241731344813	0	1.36288962211094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90612562-2	4.25420919119487	0	1.40942998531882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35832947-1	3.53070154315272	2.65046411669588	1.26473085769568	2.09567442793717	0.036111081816143	0.476098120924151	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr8-126807445-4	61.5552342071607	0	1.33647567049701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84342599-4	13.1515996359291	0	1.34230469830467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80272719-1	2.52833338836959	0	1.49742439156537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57592848-4	18.1492116354133	0	1.33845942086118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71165203-8	106.880278418727	0.161630797398117	0.24219471216147	0.667358902907668	0.504542910191458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61102775143037	5.78130469626312
Merged-chr18-60718789-2	3.56323895075738	0	1.47052989824792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13671820-4	17.7407328348306	0	1.35257520628869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44552374-4	13.5694077000613	-0.0349386976555843	1.10882933154966	-0.0315095359235809	0.974863187354974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr2-32499547-1	1.85296903098717	0	1.49981187643775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84117003-4	21.4205567591762	0	1.3360417210259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34828108-4	22.8077638035344	0	1.34383452343344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106321578-4	20.7758150707595	0	1.3386288442224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27688188-4	30.624244893266	0	1.33714843974475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144317830-4	47.4866014350664	0	1.33649635337657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19299431-1	2.42566245357351	0	1.5096073316522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137775222-1	6.31452814648929	1.14442640176121	0.708274214412268	1.61579566003382	0.106138500205722	0.946919864218419	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08954570417147	3.43550919235677
Merged-chr14-19771422-4	19.6425827631875	0	1.34621400861532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79704482-8	60.1003486070803	0.0467492630276259	0.252003169201032	0.185510615504729	0.852828554806448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82793332763521	5.89531609196217
Merged-chr4-132808309-4	21.7850804790392	0	1.3389188430006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103341358-4	58.804129852469	0	1.33626317921564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58755250-4	15.8369918797942	0	1.34120740940081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50872783-4	19.1849772263552	0	1.34088946872794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61669755-2	3.95563176639691	0	1.42184014101894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45085812-4	51.033507418995	0	1.34059698967376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47508452-1	4.72726556140521	0	1.39017283622144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-17593522-1	2.05280157505958	0	1.66524560107223	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35766557-4	15.6965569357375	0	1.33950687389856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27784060-3	20.1022246867949	0	1.35113253438823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181126104-2	3.59763406634083	0	1.44526608359074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-28520112-2	8.72811311705268	0	1.34940622099156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89277793-4	31.1248114526055	0	1.34514977844436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97773395-4	41.9682208471324	0	1.33796671152169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27355237-4	24.9485348327072	0	1.36641641660193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85029128-2	8.15126262078683	0	1.36410672675217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-120207842-4	29.5121846663954	-4.77430598771914	0.644040107653739	-7.41305693695397	1.23420865730146e-13	1.00134848361568e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.27272195720625	1.58309189503961
Merged-chr5-32714081-9	198.779677067634	0.0683573530341122	0.186734408332523	0.366067259079465	0.714314887852533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.24506609167852	8.31790092777655
Merged-chr2-98662336-3	54.6079218456554	0	1.4073631029785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28401898-4	12.9319967155597	0	1.34505897169573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29443975-1	2.8647142932239	1.18167906643097	1.43340693901698	0.824384921173436	0.409720879899938	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr4-83493258-1	2.0625208660059	-0.67413264018894	1.55715303196276	-0.432926389604243	0.665068247611118	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr16-32124927-1	5.55386588470509	0	1.39326827241292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105994007-4	27.0052485210494	0	1.34159790240577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55227857-4	15.1449505932022	0	1.33975943038481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23280669-2	13.8287515178788	0	1.37762893841493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87413465-3	21.8701347578342	0	1.34517869693349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117343726-4	18.3704427712198	0	1.34067593058969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23731209-1	4.41733178096419	-0.200007311569275	1.01698328410513	-0.196667255691688	0.844087935789285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10370544471103	2.00487246391424
Merged-chr6-128834599-8	95.023699440808	-0.618488927104186	0.254798069358862	-2.42736896971183	0.0152087795367767	0.269771869984982	C57BL6J_F1_Control-BALBCJ_F1_Control	6.31987836201215	5.69856914808859
Merged-chr10-45277172-4	18.1081776629972	0	1.34570566793704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101905841-3	19.6743287716657	0	1.34200310022822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99172730-1	3.49040984538903	0	1.3922078806766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36747966-4	18.2659213779755	0	1.34056803867732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9538803-2	8.82153626471788	0	1.37870481747438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102451722-4	46.6222108081857	0	1.34132574663706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136966125-4	49.141236340867	-0.244795482064571	0.940404428365182	-0.260308729607036	0.794625639407848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05016208779462	2.02497645810754
Merged-chr12-82401658-4	17.6468293828399	0	1.33648276855473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66124796-4	25.8641148264929	0	1.33677057598533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148881585-4	22.2731656730659	2.1360805014273	0.817694517302324	2.6123209294279	0.00899297902649211	0.186940476826419	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.59469921160139
Merged-chr12-82448306-4	22.0037126931295	0	1.33816330464918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173973331-3	17.1046628741269	-2.34303210630264	0.932749113759309	-2.51196390512707	0.0120061368017366	0.228190587056284	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58197412052501	0.723581231604105
Merged-chr17-73942745-4	14.8408223559491	0	1.34393823698372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124021910-4	12.1447156935323	0	1.35073120570056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137289736-1	4.38984003735256	0.589737833088016	1.0884120026335	0.541833268708081	0.587933370629108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.52633957112176
Merged-chr10-57492261-4	34.7878208111521	0	1.33851529760668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-32935191-4	29.3788288858926	0	1.33545381216475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53112916-2	2.74676567579254	0	1.48686951576924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120038430-1	2.54201006408766	0	1.51051983100593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79286798-3	17.2157649533505	1.46586867664334	0.710508559863728	2.0631259909444	0.0391006593675506	0.500228934469447	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40590822918039	3.33712439280187
Merged-chr4-63752823-2	4.03533417649394	0	1.42002037125196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135711058-4	37.804521786608	0	1.33777356911548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108387736-1	2.90703514066855	0	1.47126945364632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56713914-4	32.4170368690369	0	1.34280178293629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55353388-4	22.5215229342975	0	1.3342241008065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31597663-4	27.356963650158	0	1.34332849809065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63989921-8	77.6242122698444	0.62952136914459	0.22727401588682	2.76987831929755	0.00560772379220762	0.134582895196739	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53838352888212	6.16571870561294
Merged-chr2-148468273-1	3.1849054327501	0	1.44477314502835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5539646-5	33.5012498144881	0	1.33524073430665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65693765-4	36.781522040201	0	1.33644936545096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33867089-4	12.8381325401355	0	1.3430834055589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25156002-4	18.7326746008632	0	1.33767094222012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103732671-6	29.8552313473779	0	1.34348634113031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132605962-4	34.1297651385996	1.72638209189579	1.13510688027051	1.5208982712574	0.12828536785998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.837303648891292
Merged-chr8-43443049-4	21.3250349148682	0	1.33586102284794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52185116-4	14.8027205824099	0	1.35451613903846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110602021-4	41.0715310739915	0	1.33554278228667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72106803-4	47.9325871859865	0	1.34017687837731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101761845-4	16.5079298959708	0	1.33783309773663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39004187-4	29.2199009388219	0	1.33482297495762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-95968804-4	12.4992719670722	0	1.34515282164842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143916703-4	28.4479210792096	0	1.34120518677569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-30873752-7	66.8535850848683	0	1.3337021004882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95850740-4	23.9260119556638	0	1.34594122415476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119157248-4	17.9479294177723	0	1.33693016794649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86824301-3	26.569644430684	0	1.33783500691464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90908285-5	99.4822860772753	0	1.33914661808731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165691680-4	21.465838099265	0	1.3430321294013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100081348-4	17.5638072095545	0	1.34071512100266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108850700-4	24.885111640567	0	1.34229275809445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3000081-4	13.7103547536171	0	1.3717602291417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46778302-4	40.3206100371819	0	1.33637030853006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145745497-2	3.62843888874552	0	1.49881771622367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64102122-5	36.2957607315819	-1.96228939458429	0.381974769722378	-5.13722253438492	2.78828707522471e-07	4.17544069206997e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46474741595992	3.46188695403172
Merged-chr11-51539804-4	17.0708815176589	0	1.35128092915899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167059678-1	4.98719341319762	0	1.40097557797098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-134692649-4	13.7604059572309	0	1.34954248062245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80071278-4	53.5792133144337	0	1.33755439480271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48333096-3	12.2325527994718	0	1.35453582031809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62363794-2	6.84643640360095	0	1.3822027949681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99147103-4	25.2196614969957	0	1.3433646299241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130814874-2	3.61167997103875	0	1.45483463825365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39583398-4	20.1332203162949	0	1.33977106883525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55299519-4	28.78127519675	0	1.33545777705266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11463904-4	76.3201258086766	0	1.33886134034863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85913306-4	18.8391907399395	0	1.34388021102467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61057279-1	2.05233362983672	0	1.54906983533096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84103584-4	31.4956366786202	0	1.33791087949347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27008509-4	12.5671475821779	0	1.34165695286557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31615612-4	14.2029328311558	0	1.34073630843032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59562673-4	21.4104935947131	0	1.34239546738987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117830010-4	27.7872369385216	0	1.34701456098794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57930739-4	25.3020168474855	0	1.34779532587518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47645136-2	4.97228871276699	-0.848905620979664	1.02850830574899	-0.82537556209764	0.40915840469128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0.662147012823607
Merged-chr5-64239437-1	2.89455744844954	0	1.50722215417634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6109046-2	3.88385843404292	0	1.40310174135944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120145610-4	20.4222831885707	0	1.34205494749846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138776805-2	5.06968080091126	0	1.47323444943218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112762829-1	2.44283973567953	0	1.65938334482034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95729006-6	111.077447221779	0	1.33844153936793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37195239-4	40.7864288808731	0	1.33501100243249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27577816-4	16.9071334514339	0	1.33965690076641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11429390-1	16.5524293434927	0	1.34505620392106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124036874-1	2.50756640960246	0	1.43723674063904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-38728408-4	38.175932102029	0	1.33753705667648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73458856-1	3.92816424620696	0	1.43257335432589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4182069-4	29.0709098833396	0	1.3546375450296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108317708-4	20.2498257591208	0	1.33795431941459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140941064-1	2.99277938708461	0	1.48521007386303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130533521-4	28.2683771110441	0	1.33689308287529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86592840-8	54.5955837015654	-0.454828034988918	0.252127562764021	-1.80395998756635	0.0712375797780669	0.739855483216649	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18585773456568	5.71103218340246
Merged-chr6-121110331-6	45.3420172084181	0	1.33628219783147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137064104-2	3.91414593288311	0	1.5501326460171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167936050-2	7.01092765549663	0	1.41445404809603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140510420-4	12.2588286614811	0	1.34631393605927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96576851-8	71.7361842486454	-0.0122339254949236	0.225875045898422	-0.054162359751884	0.956805809209544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12859351228902	6.10194234105071
Merged-chrUn_JH584304-21087-1	4.55061309165989	0	1.51400133018309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-29026430-4	21.9453297601299	0	1.33878766459503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108690331-2	4.3401982326669	0	1.39886506367197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37223167-4	36.8330794622928	0	1.33739720166812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90225002-4	27.1067039261472	0	1.33607584223183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149790798-4	19.1206769578513	0	1.33885227820582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82822072-4	15.4821268891991	-0.0376405468671901	0.64392361430469	-0.0584549875653099	0.953386215868143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31776252764976	2.28812082625435
Merged-chr10-128345090-4	19.9418398195179	0	1.34346868585579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-53958-1	4.83446135788069	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66135826-4	20.9287748643016	0	1.33633831161838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27728140-4	16.7899478422005	0	1.34989224340389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73598438-4	15.5556031402455	0	1.3410344028771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32343229-2	3.55956302974625	0	1.45916083184688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126872768-4	39.0403156957247	0	1.33468537693665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139781662-4	28.8697071544435	-4.61728929875696	0.605012717462149	-7.6317227150615	2.31637242000076e-14	2.17096014446243e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12317606216724	1.39949824061849
Merged-chr2-153117254-4	56.8860128724082	0	1.33815118814136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33918957-4	32.9288845952634	0	1.33912980942859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155122132-2	8.86375151655137	0	1.44262310709239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35752289-4	14.6984006540824	0	1.34137394478498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120116236-4	21.8507814907822	0	1.34198292656414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192078622-4	28.6979654065613	0	1.3371401948261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32507319-4	20.9974758086921	0	1.34744503689394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125749225-4	29.4445140989683	0	1.34509440757088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170953372-4	20.3599317078915	0	1.33897829691058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65818453-1	2.37349989685172	0	1.44133330245412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46640093-4	16.3290935566862	0	1.34190708377383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75922781-1	2.00376598494004	0	1.62262036725309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-37248721-4	19.436294995169	-3.35506318267292	0.511871323868564	-6.55450506060077	5.58267221011548e-11	2.24791465681235e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53867082645443	1.88803440763582
Merged-chr8-46811508-4	33.3755600051015	0	1.33560306456721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-98662743-4	151.767969798731	0	1.38369010932685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3153877-4	35.6981261637858	0	1.33943646170565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165983864-1	3.22192580515972	0	1.39497243035608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5466996-4	11.9407957216331	0	1.34869005529272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97475774-2	5.28681503356285	0	1.44055999727236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5414590-2	3.29282474483768	0	2.02955964894309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99302257-4	37.0844660866858	0	1.33640269555435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97175224-4	22.7523126053001	0	1.35074927890759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88627740-4	13.7483378552569	0	1.33836358818796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66932790-4	24.1475210472818	0	1.33843572477597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53273570-4	49.890770774155	0	1.33548863290454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17694920-4	35.8722328223075	0	1.33577557030693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85437731-4	25.3719137110368	0	1.33556538596161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102886356-4	15.2869335101652	0	1.35403996944831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184530752-2	4.78004507436905	0	1.41760860001144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113626624-4	17.7592234153655	-1.83335486684627	1.22333981781829	-1.49864726067356	0.133965165268596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr15-103462735-4	18.2511695225418	0	1.34171179383529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-36335-1	1.79232935511161	0	2.1689867984996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44546426-4	13.260206436109	0	1.3426877690736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34934983-4	31.2668715287744	0	1.33623304796554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69469183-1	2.48185185970474	0	1.65129477480663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14111118-2	3.46632700572185	0	1.45369615278734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53490844-1	2.6125905311637	0	1.53210631837934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139457145-1	2.81108212840666	0	1.38710865277612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97854574-1	2.78739798638693	0	1.54312955475713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91820520-4	16.3368377683455	0	1.34010857922693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61285551-2	2.80352655984319	0	1.46056537329227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8655551-1	1.56191647080629	0	1.82179909999238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130801105-1	6.01187471621785	0	1.42174965995891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69321450-4	10.7618098628372	0	1.34131879238011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30518018-1	1.64525521064718	0	1.66505317317897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27762718-4	38.1185955383322	0	1.34722039129132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98993217-4	23.095623144064	0	1.34156848074314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30997595-1	2.18537146992376	0	1.49834336500114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134730170-4	17.5769899016262	0	1.34315408022309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127635243-4	23.0481109416433	0	1.33995590129124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77793406-4	20.6180235698704	0	1.34539727599431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64619976-4	15.7886773608463	0	1.34073573955369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17921979-4	45.3136308574285	0	1.33916188615192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120881395-2	6.67682945556445	0	1.37212087720468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20736002-4	15.8893523947909	0	1.34015496167383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30608261-8	103.722073675697	0.384579709395292	0.216730831915549	1.77445777324911	0.0759874608772202	0.769615033486912	C57BL6J_F1_Control-BALBCJ_F1_Control	6.17578688462774	6.4989521125595
Merged-chr7-80779546-12	182.689206553789	-0.1475972245246	0.217352482975958	-0.679068499718616	0.497094460426143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.7041776426649	7.58759050362534
Merged-chr5-29948280-4	52.6920393470916	0	1.33657261314897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99415224-4	33.0010922111279	0	1.33713815489014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103870524-1	3.47001361089208	3.45672047849612	1.29817988911626	2.66274382115816	0.00775063957647246	0.168459422925816	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.15203663810895
Merged-chr7-43392560-4	14.5072719924197	0	1.34005956299985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11725718-1	1.51296047127321	0	1.73637373424701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21740579-2	3.69258730607954	0	1.49013998978679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23184901-4	27.6417164831218	0	1.33801214779682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95824430-4	25.1446444694475	0	1.34301512687458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120709443-2	3.56675583552525	0	1.45877046850741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152528935-4	53.4733346556496	0	1.33903736838469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66886980-4	47.2329427993064	0	1.333999158061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4943409-4	22.5459683566068	0	1.33949393401475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47055939-4	44.2794200469588	0	1.33929689508511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100461179-4	23.9741246788972	0	1.34079507376651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87706326-4	26.0803190606758	0	1.34277161887221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-162977544-2	11.8917992558194	0	1.40301465803924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60836651-4	31.5882465893548	0	1.34176422118954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54807931-3	26.3164333798848	0	1.33988888114636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45950699-4	18.9942474533903	0	1.33795947946232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73461689-2	5.72007980438122	0	1.39605711461134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51938583-8	55.4273062639713	-0.0954451410089902	0.275474885024658	-0.346474928196982	0.728985823143755	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.07246526294003	6.03100291666416
Merged-chr4-139214114-8	111.190037947013	0.821553932231419	0.211165842616415	3.89056261207822	0.000100012065853639	0.00587101067790276	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18746383966532	7.08657912726809
Merged-chr10-122853958-1	1.82024428343308	0	1.68983092702014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27350533-4	33.6755305359964	0	1.33908416862255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22125814-4	20.1829715749302	0	1.33753339326992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120527247-1	2.52906821044429	0	1.43934106422271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59438604-4	19.3721361002908	0	1.33709689581107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38929151-4	19.9197133389415	0	1.34091818871281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14372871-2	4.27816969855208	0	1.40473516551505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3129088-1	7.31396269080811	0	1.37577660709334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79223644-4	33.5778913679653	0	1.33968931420086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75449091-4	11.0193252246921	0	1.35285508468941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120253970-3	10.8156300477335	0	1.35563109997402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78258423-4	45.7982157699764	0	1.33539666475353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172458677-1	2.6651811234892	1.83606329052897	1.33975757808159	1.37044441514415	0.17054821551142	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr10-16498795-1	2.58952240461701	0	1.48718663659061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71963828-4	27.988181482509	0	1.34572212751598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68275050-4	14.6783714147064	0	1.34168823689657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49313291-4	18.7269761986704	0	1.33733557287769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71041508-4	13.3077158871454	0	1.34999653034674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121796222-4	34.6228166039614	0	1.33615739653569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64211505-4	22.4043722324721	0	1.33758360527385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51422739-4	19.1273766824783	0	1.33698819754249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160335257-4	11.2451624101576	0	1.34737852205479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90641587-4	15.3336069265973	0	1.33837178998997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50366739-4	16.7188329736532	0	1.34607308905028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167319161-4	57.0066352572905	0	1.33491522975549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136140308-5	56.5805886408322	0	1.33327269816613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92482830-1	3.37314631763398	0	1.42336106685097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-44067252-1	4.87653173118062	2.00201844215819	0.921828572337686	2.17179039816615	0.0298714762583228	0.422200618285536	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57403368136583	3.51147878120381
Merged-chr6-38712371-4	20.7527244148495	0	1.3403246400423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31565296-4	19.2948838273043	0	1.33712840176385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87830179-4	29.3926795414697	0	1.33329413802841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36631071-1	2.03248054813709	0	1.61352079778823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145017929-3	6.85640497200099	0	1.38823089879534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87832283-4	33.0905881835643	0	1.33816708360144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65551181-4	40.0253278303323	0	1.34291476983471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3548100-4	19.0302084652518	-0.28778244949685	0.511670417030382	-0.562437146878793	0.573818215862079	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37721832140181	3.11603585611695
Merged-chr6-97431661-4	52.0659893717537	0	1.33591720831293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49462669-4	21.6572351005006	0	1.33679921558519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-64873975-4	23.9677465558724	0	1.34426614148565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-1235-3	570.771218873198	0	1.39900198015255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8663922-4	11.8922343948469	0	1.35402336254961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66620933-4	12.6168373487459	0	1.35262364116969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19417483-4	24.2644838390878	0	1.36838349546326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50170056-4	21.0206125295207	0	1.34000515121939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43355414-8	125.236814324453	0.0837572792166375	0.190994432268615	0.438532569885812	0.661000265390694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.62443509586171	6.73857598340682
Merged-chr6-140548448-2	6.76697782638205	0	1.45000080651166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86885906-4	36.6748773513829	0	1.33742157446097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153319428-4	17.0323677807964	0	1.34484549668564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78105642-4	20.3595258723023	0	1.33995491721253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33745614-4	28.655619975382	0	1.33534199119825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20538692-4	34.2832629523719	0	1.33504309499609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94288358-2	3.93618167685152	0	1.44404793840982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66353252-2	3.42081703753936	0	1.51507473680399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10591294-4	26.8493838483485	0	1.34480760316853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38690756-4	17.2912672712098	0	1.34513890303852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12024348-4	17.2996856809007	0	1.34075211161398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72056781-2	4.25019424765793	0	1.4643892274461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77962861-4	23.2417485866052	0	1.34256969010584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77820902-4	15.2247495577348	0	1.34053941386781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154117625-1	3.14377232239319	0	1.41248210275014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41374782-1	1.80867618352775	0	1.64796431741137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-49151659-4	29.7189781241729	-4.08361344918163	0.633120538862069	-6.44997784548461	1.11866503307098e-10	3.99155697657153e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78147712643213	1.35339221635894
Merged-chr16-11001875-4	58.7371631571204	0	1.33505639561107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40404793-4	17.1582464954701	0	1.34553310759604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91972287-4	81.8334302275428	0	1.33315182174484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181257805-4	16.6339759242263	0	1.33894428722596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70969953-4	10.6646802258868	0	1.34608769143772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-49196626-4	26.8252220813697	0	1.34106812355902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73442142-4	55.1858318872207	0	1.33873539480453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36345219-4	11.6232881712613	0	1.34983992330425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36262033-4	17.8618276007601	1.41794461285875	0.754483945122408	1.8793569061681	0.0601957763341696	0.667928598846524	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	2.34706616758795
Merged-chr6-3346070-2	5.47596372369875	0	1.39108789017081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78623676-2	3.89621092540935	0	2.00411873778013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16406195-4	20.0918492685289	0	1.33905903347916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33836808-4	13.5586453477289	0	1.34623941683013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96483839-4	17.7528400633031	0	1.33860754397157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110698574-4	26.0833947176448	0	1.34579839576033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37732520-4	31.5113444348385	0	1.34159820337855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95839708-4	19.6115467100335	0	1.33984893101841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5712087-3	21.1497946758589	-0.271898719963067	0.488728078069836	-0.556339470072793	0.57797880960283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73712486364482	2.81512764887202
Merged-chr8-120619812-7	43.5204307903258	0	1.33409712070839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57216196-4	31.0146681777258	0	1.34216575188604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100204773-4	28.863968754487	0	1.33700933380619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145730664-4	24.0826280967665	0	1.35321977261314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107610198-2	4.3109287721629	0	1.44551356404436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-19857455-2	21.6076045337532	0	1.34322639773621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28665445-1	4.42546906664819	-1.12170450344361	1.50388328780071	-0.745872045086691	0.455744713675685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48280189120016	1.85784526308241
Merged-chr6-120470819-4	58.9633277947876	0	1.33476030306234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120514447-4	45.7672990464971	0	1.34651860227254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31113008-4	31.4307636590055	0	1.33939350189273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21701998-1	4.00834432899523	0	1.38712794884823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55691253-4	25.051361106263	0	1.35122486856368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65319860-4	35.3051976634321	0	1.33346141826926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144213965-4	41.5168241386634	0	1.33463726441871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71338272-4	30.8125404829814	0	1.33424921690844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58481375-4	18.1440844191663	0	1.34316128962414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20418614-4	16.1294232569958	0	1.34606370757893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70446891-4	26.2612524143862	0	1.33971323465163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44952928-4	36.3997637759895	0	1.34009951423765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123722904-4	18.7306214669093	0	1.35931437498102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49801682-4	23.4415591181974	0	1.34284664484664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117417655-4	38.6168134142041	0	1.33461681870718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19958087-1	3.18003437550406	0	1.42554826435033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10533110-4	41.0996197214346	0	1.33434600078136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105703488-5	37.0452516292228	0	1.33206737767184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9149649-4	24.7652267596948	0	1.33710162748554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88118088-4	17.517640064393	0	1.33995615558731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62501115-4	19.0883984498817	0	1.35971288427358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87626581-4	60.7286843119149	0	1.33548849001753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42382260-4	60.8783410675832	0	1.33975096943452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90876691-2	7.89560222982792	0	1.35197874449891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86580535-5	31.6282175889002	0	1.3359625201126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80982656-2	14.3075253411485	4.1348859601378	1.05725688758186	3.91095674921071	9.19312350264456e-05	0.00549152747780501	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.09012216938928
Merged-chr11-21014551-1	1.75897545866102	0	1.44112709775322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8747940-4	26.4528189030471	0	1.33883469428799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18647056-4	23.5694007625829	-0.0343110331583702	1.09755911598354	-0.031261216510988	0.975061220020667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr14-102833698-1	2.38328685152516	0	1.60116979542894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71344094-4	15.566979893415	0	1.34168049482127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37679013-4	52.5677733616129	0	1.33910940001982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24151510-4	18.4103377751381	0	1.34523369355374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52925304-4	30.556837642757	0	1.33984677508628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143081906-4	31.9669421634257	0	1.33568497490652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20031005-2	3.74634342135356	0	1.50406928918796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165771796-4	41.404193690349	0	1.33901732066063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37285834-1	1.94585049147846	0	1.46512984769486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28617630-4	38.4108001281417	0	1.33644241953166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170319396-4	31.4782851462675	0	1.33650505452676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119963267-1	5.56137339911603	0	1.36985799397808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-159199120-1	2.81988090095341	0	1.44852174594137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126185949-1	3.30099698111999	0	1.41010533075533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67171571-2	8.01045916141533	0	1.409133150807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5417856-4	13.6918005081798	0	1.33767751193335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60744758-3	7.19942157101175	0	1.374377695676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58563667-4	28.1321991466285	-0.198715493785195	0.703565996884069	-0.28244044576523	0.777605805606336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.61412912633251
Merged-chr2-153214896-4	68.4745549970865	0	1.33653400790767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69383456-4	33.1697688603311	2.84191483335393	0.461957057715767	6.15190261927442	7.65588834987821e-10	2.21365124899484e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48387788431554	6.39146173982121
Merged-chr1-21070269-4	14.9382623730688	0	1.33943202433378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110709949-4	21.3122172772084	0	1.33607704727569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160251835-1	2.69634533117	0	1.48027570225622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122561373-8	81.2592459522411	-0.114201556019212	0.238254483805898	-0.47932594675637	0.631706766249614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0866117864024	5.97370347371231
Merged-chr7-88054407-4	33.0817083732391	0	1.33474611528932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54970987-4	36.6606698898078	0	1.33800595609021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35222108-4	44.8652537253615	0	1.33587546397612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113614628-4	13.6212050499724	0	1.34926306068489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95105535-2	3.64176080182474	0	1.49088993554524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120009955-2	5.03142036322782	0	1.40421420035792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72458158-3	30.6343917577587	0	1.35456540716089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55227145-4	14.7333589672381	0	1.34697417093354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32355556-2	6.57691827186395	0	1.42195289123775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135620045-4	34.7177797096574	0	1.33320525508355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85497481-4	18.1095613116649	0	1.34103055549153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39761271-1	2.3606674531949	0	1.48270071535055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-88459691-4	29.3328421161105	0	1.33794193895042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122745937-4	11.7121084823665	0	1.35031844584956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118089392-4	22.4398653482008	0	1.33591946345647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30864826-4	40.4305079594133	0	1.3398770551735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23682950-4	14.319986392667	0	1.35520017115759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77442437-1	7.21362756550326	0	1.35541037554635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148487108-4	21.3579285914818	0	1.34251825578716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46899503-1	5.35633405917345	-1.57016510948756	1.05925167136607	-1.48233432330826	0.138251359817047	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89082683942207	0.67591700901439
Merged-chr2-44992659-2	3.30265076062576	0	1.45561260076104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37620062-6	62.2179128493929	0	1.33478244510978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13258163-1	1.84530564219467	0	1.70986287746388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138258939-1	2.59942600052189	0	1.60079035698709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64668677-4	17.4986888867155	0	1.34179829913253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75300029-4	23.8754546566453	0	1.34204212650227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68362700-4	16.8748981624777	0	1.34689873699092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23918216-1	4.24074169169774	1.22032656421418	1.35153445149159	0.902919317274816	0.36656871749605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr4-63644130-2	4.01582911312277	0	1.59205026793006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13300355-8	71.7834485449754	-0.188446586954481	0.226548321813601	-0.831816300583903	0.40551264157896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0853798254971	5.90309992243742
Merged-chr6-16882885-2	6.10365269165623	0	1.39760613883551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52895139-4	28.3896488184947	0	1.33529684291535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54149992-4	25.664037631061	0	1.33741991856957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152817629-2	4.9765207812702	0	1.4472080676647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83104147-8	80.4186029671543	-0.198244049729495	0.199464085689287	-0.993883430415176	0.320279622065638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.70828080276049	6.51353747277435
Merged-chr5-140116172-4	32.3407722640164	0	1.33791794924532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102860162-4	24.2273171039756	0	1.3392350164442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57407902-1	4.7194897644102	0	1.37091162527056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105615944-2	4.05628675795897	0	1.43989967442487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58761544-4	37.6311543151662	0	1.35360781959864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135644752-2	5.7602545717638	0	1.50552322548724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126725286-4	17.2039922845052	0	1.35069126764999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60946199-8	89.9900144712789	0.180969757077684	0.212545735685516	0.851439133765769	0.394525460825565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.95268360315947	6.1161536764236
Merged-chr2-26493114-4	17.7848047068495	0	1.34194159840656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88651382-12	121.622091260735	-0.344318282978125	0.230570179370277	-1.49333397718002	0.135349785834046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.34217973788766	6.99956714558949
Merged-chr8-110363180-1	1.59265906382112	0	1.85427326949496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93405648-6	24.5127967483549	0	1.34508202002777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67828594-4	20.8760121414804	0	1.34991339526003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97107664-1	3.76708335163594	0	1.41756673334095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20304938-4	30.5950133098243	0	1.34539210873339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20731438-4	39.9024757539464	0	1.33724113800225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191428252-1	1.42639325066293	0	1.70312177777375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76588702-4	31.9667397415091	0	1.33933101446745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22811033-4	13.5350072881689	0	1.33929655104599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172398190-4	15.783656924586	0	1.34333838462035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126131929-4	54.0898545711273	0	1.33431770698995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103760919-4	29.6017090840217	0	1.33589635484197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43478339-4	24.9031803170561	-0.206253879167166	0.50419729303457	-0.409073753501933	0.682485536940885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30457403055127	2.8681342618067
Merged-chr17-29395601-8	116.944099507104	-0.0644915816565958	0.225111507754697	-0.286487271574193	0.77450494093228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.51546680474564	6.39013719089461
Merged-chr8-103588916-4	14.4261150431147	0	1.34181837552848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43765397-8	97.9391044598472	0.00589624489458081	0.235001615592043	0.0250902313149053	0.979982992012398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12663703948851	6.10305133373093
Merged-chr19-34500962-4	16.9804224715049	0	1.34591619755494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64100675-4	38.7299252510585	0	1.33644876461761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99341259-4	11.7808103656123	0	1.34559376067521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74313259-1	2.51888590042319	0	1.44323424199821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34958888-2	5.75309306251563	0	1.37314465560606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63131892-4	16.2930596090019	0	1.34257846220274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19942137-4	23.287613809759	-2.3776256845634	1.0866157961721	-2.18810152856164	0.0286622076019095	0.411524908928344	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0.303163067301871
Merged-chr6-129216486-2	8.73717828317159	0	1.45288500582377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122991354-4	17.2627542732226	0	1.34270611307999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87943172-2	9.14133975099706	0	1.37542317440347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95192103-4	25.3861264723582	0	1.33808628314444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36985803-4	61.7985238534679	0	1.33504636614659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114229948-4	21.216089194587	0	1.34391169204342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67633336-4	21.03240039076	0	1.33944577058554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113484329-4	21.0436188180169	0	1.34376115302237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74393130-1	5.67233144166615	1.28239991759927	1.00096473767589	1.28116393048653	0.200136092409579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.9134233865196
Merged-chr11-32559026-4	23.9112053489802	0	1.34128959428053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11669209-2	6.06631163144483	0	1.47492471592827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57845315-4	18.0369937776203	0.168663108979878	0.777752862234956	0.216859515624547	0.828317828637419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.3626301568499
Merged-chr3-31216155-4	13.9398161888972	0	1.3462192262412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134144038-2	3.04175291820233	0	1.45231250598415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108902344-8	86.2252822871366	-0.938020438099517	0.199714435172362	-4.69680840691344	2.64258110686919e-06	0.000291375388211566	C57BL6J_F1_Control-BALBCJ_F1_Control	7.21560829046621	6.24429666500288
Merged-chr6-113663532-4	25.0214367165459	0	1.3389281968292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126763735-4	22.3994915494933	0	1.34194802009384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88587555-4	90.0600705853702	0	1.3417847576108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88270707-4	20.3737391084611	0	1.3432749593882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145822187-4	54.5681307577515	0	1.33731054809675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54959327-1	2.57787020652156	0	1.48704301022215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85285197-1	2.4860101101765	0	1.44743149086715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102367296-4	38.3754367955289	0	1.33803664866515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102065859-3	10.8291385252853	0	1.34655700960042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56507826-4	30.5181167349393	0	1.34049393473868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43077784-4	16.9046828694847	0	1.33739271744616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-67826-1	3.06393769599041	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50753828-4	28.1648191868048	0	1.34168318687636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110689521-4	19.9450004333823	0	1.35516943414117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73314083-4	19.0558658183395	0	1.35413779561624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62221274-4	15.8650405522682	0	1.3499203574242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123388621-2	4.06140072557832	0	1.42786776195139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80863535-1	2.64546362984508	0	1.56298425289186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41521479-4	27.9775792232598	0	1.33851597497471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87637664-4	28.2393541773885	0	1.33614917260483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117860515-4	44.9144681305183	0	1.3359205778165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97449927-3	43.6138122254455	0	1.33618576331277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29245924-4	72.1959772357069	0	1.33815697498276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146248924-4	12.9044166573842	0	1.3469460519517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75141281-4	26.056675351682	0	1.34366263416356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79112033-2	3.35609333472866	0	1.52145063906511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14350889-4	42.9145788698533	0	1.33821140908945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39006429-2	4.39323272281785	0	1.50577855945695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88712594-4	42.1489853496595	0	1.33598444635936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110600184-4	22.1889339445899	0	1.33531683258203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34187749-4	29.4958909028353	0	1.33760409899677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55457785-2	4.25834409522371	0	1.46664606935304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45288639-4	13.1131149124379	-0.399438279537283	1.06757444385645	-0.374154965806763	0.708289026704503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.67591700901439
Merged-chr2-127346503-2	3.64589014219181	0	1.40893304573431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75086903-4	55.0549691110068	0	1.42358398977132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132944924-4	15.5612035617933	-0.416341723983345	0.62145454798244	-0.669947183321779	0.502891460060101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34310688897156	2.09070350854821
Merged-chr2-165852679-4	22.7188235355703	0.129132116792288	0.530591644178983	0.24337382280511	0.807715820633887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00752299433723	3.13151755833621
Merged-chr7-31156457-4	30.0873891048401	0	1.34766807171982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-89159433-2	4.57427923454209	0	1.77313695292601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128489625-4	28.4388082252804	0	1.33966720519391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75045329-4	33.4011264162034	0	1.33449822689566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85562667-1	3.66125707004625	0	1.42614084234263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87406579-1	3.21094298948662	0	1.39539971016662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28513258-1	2.4432016307269	0	1.51188203955688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29462648-4	24.0399332070542	0	1.33844490413441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33101824-1	2.31645817282011	0	1.52248673789976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21406979-1	3.33482498420288	0	1.51380525606164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-17514251-4	21.5411551003446	0	1.33711385659081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57864470-1	2.1505589334411	0	1.48373744524248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73133203-4	14.3792628302723	0	1.35493058887741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4427457-4	17.3444393372738	0	1.34246508836276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75685613-4	50.4916480547611	0	1.33575652741808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35056809-4	17.420857099608	0	1.3390841020783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28525341-2	9.18121478410124	0	1.38177409205799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30602968-2	5.25399903487312	0	1.52163501380835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34198255-4	23.333087579453	0	1.33469229094908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110732783-4	37.8912490599973	0	1.33628098013461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57536776-4	42.841571564391	0	1.33847775135235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76400170-1	3.97795281593664	0	1.47791172909209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130919909-4	14.0553364057086	0	1.35144921859076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120134588-1	5.66827498847926	0	1.40702618801106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29488230-4	25.1567486734486	0	1.34095833523449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75720788-4	28.0247164512614	0	1.35521385335286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37419772-4	15.0124275166065	0	1.33673442008864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120866899-1	1.77323924136586	0	1.56289748693104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25883570-4	36.8149365153142	0	1.34232999943783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43511208-1	4.04095504405174	1.65921743720688	1.11450225248719	1.48875198188614	0.136552691106255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.62438888480879
Merged-chr7-43466536-4	15.8640393999796	0	1.3407183642851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66990848-2	4.4763329542136	0	1.44689057695536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61340303-4	20.9379095058392	0	1.38114928761554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32950996-4	20.5814285500368	0	1.33450355186115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105627298-4	12.9595055468021	0	1.3540106982409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44818775-4	11.5300990972634	0	1.35106861133741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-108185457-4	24.8882897344805	0	1.33617686152912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40304630-4	15.3867409159665	0	1.34341851731568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46834042-4	31.0859760631347	0	1.33198229178618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122556843-8	58.7554867031502	0.285241352575271	0.228634701968069	1.24758555949703	0.212182869460282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98585056485586	6.22526372469309
Merged-chr1-165433078-2	4.41783035374034	0	1.43601550007261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39413506-4	20.1609914627242	0	1.34813820734946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117861066-4	57.6056194598687	0	1.33609162243564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100053384-4	18.9611638890106	0	1.34775669811889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91024138-4	25.1811622630559	0	1.33551152658417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37355797-4	11.1098888493318	0	1.34083220573291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142459336-4	25.1932225438208	0	1.33558326531521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117526349-4	20.0363065062522	0	1.3384862068298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180387664-4	73.1145576398776	0	1.33904234698841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152741795-3	35.237969385131	-0.754286795513971	0.581409492819323	-1.29734172700956	0.194513633159823	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62606662475342	2.06861510361834
Merged-chr13-113435336-4	23.983348244602	0	1.33858507784594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91964642-1	2.48812032940392	0	1.41145268421697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107317922-4	93.3752158948614	0	1.34075943169818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51734410-4	22.2263373069718	0	1.3431823616215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76048314-4	16.1982230295981	0	1.33708631514517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24736019-2	4.90193372498795	0	1.43103822567785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87542194-4	45.898733575608	0	1.33604211178757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30929071-4	22.0424203231488	0	1.34303147369937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115555757-4	21.1952265969293	0	1.34714501822452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41323510-2	3.6012519555099	0	1.41220904251042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3301306-4	20.6562603004805	0	1.33806175129859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91740394-1	2.22106982667401	0	1.44672917193401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40991920-1	2.56448644694237	0	1.63700976916086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20640965-4	33.6132107213645	0	1.33622898009825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73008248-4	30.9702453707741	0	1.33498148094339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118763001-4	18.8344238997904	0	1.33536465941447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6492634-2	6.43912125965197	0	1.67468663724614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113781063-4	14.6484622961672	0	1.34485664292816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46286992-2	12.0886576162112	0	1.34934362381666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82462184-4	15.8956809075484	0	1.34817836743121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10979989-4	18.9345977286423	0	1.34270761110016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162625526-8	124.992521785489	0.0732572805181821	0.132866089313844	0.55136175751467	0.581385710806719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.63542987560718	7.7009533411647
Merged-chr6-37615294-4	14.458358222671	0	1.35168734040278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16191237-1	1.73031615547937	0	1.70162472729404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108743372-4	16.1870400810896	0	1.34146856797176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34655813-4	16.1897461375839	0	1.34215161122969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143038743-4	13.8352103071614	0	1.34678955410506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88595691-4	49.7608691274357	0	1.34261004782482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70967810-4	32.8091584367005	0	1.3428713953951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117818733-4	42.4162411613614	0	1.34395625632213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-23630864-1	3.46271244936299	0	1.47463443711837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73566720-2	3.09694315699291	0	1.4714375189358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30085188-4	9.76567779166482	0	1.34801153748142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12375771-4	31.2724277307813	0	1.33656379328571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57722557-4	20.4498345631027	0	1.33517171179161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8939177-4	12.2522515518285	0	1.34452167758538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84995701-4	12.3171942036301	0	1.34497472295318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13299361-4	14.4840146551172	0	1.34127136903249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8346566-3	16.9504528319938	0	1.3596652653428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60913520-4	8.22808029180604	0	1.37472913221742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118810908-1	8.8500901706103	0	1.3444594918846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36948116-4	15.438356289509	0	1.34935702847227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105041748-1	3.96156962382936	0	1.41486116910505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64092360-4	45.6214648768757	0	1.34070626389567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36067940-2	7.75198042647236	0	1.36448730387905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95677740-4	50.0707048549412	0	1.33299659020183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4302892-4	20.7023414145771	0	1.34265426307792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76194704-2	8.51092846619609	0	1.35870897797204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103549679-4	18.6266156987411	-0.0369711462939477	0.569718200557063	-0.0648937426569798	0.948258602730705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83977088234384	2.80621469843146
Merged-chr7-16313639-3	12.9191024678295	0	1.34052803998808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8143170-9	101.513797001595	0.581634959850456	0.205453993923291	2.83097421833336	0.00464064615221348	0.11683487122028	C57BL6J_F1_Control-BALBCJ_F1_Control	6.28761539625684	6.8729038536696
Merged-chr14-54770588-8	74.0831841815531	0.330244277364687	0.218645464490963	1.51040991466959	0.130938860299055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18841303175881	6.46892463777347
Merged-chr7-64141489-4	31.8870495658985	0	1.33827676310275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132494743-3	41.6725664011352	0	1.33459334448458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36560395-1	2.24609866062969	0	2.38590948849722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75960867-2	5.32651940685662	0	1.49010183228083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47294184-4	17.2264524909168	0.335314428642236	0.691684996832665	0.484779097678414	0.62783305133991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89200393807192	1.97194432603249
Merged-chr4-32239125-1	4.29558147249813	0	1.38137152995621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117872327-4	26.5651476810504	0	1.34099698023174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98249858-4	18.8585096833683	0	1.34225348287561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77800267-2	4.54367398423499	0	1.41212671852823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46788531-2	3.50345083213365	0	1.41999649089609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114907799-4	39.3131168857332	0	1.33502228068529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3781646-4	28.6681244991175	0	1.33506776444023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75297199-4	16.7048742364562	0	1.34400581730483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21200942-4	15.8401596607102	0	1.35578843262923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59739377-4	16.9176692293992	0	1.3479112320138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100112427-1	2.48370896654617	0	1.55082551223736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58847147-8	76.0153841678814	-0.200520855163786	0.209234363514531	-0.958355271073145	0.33788364186049	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.45304207229586	6.29196287161853
Merged-chr16-30442626-2	2.69238821654646	0	1.56149404273155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3834614-4	17.6166712454653	0	1.33829245753025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51729071-4	41.9271709039686	0	1.33623861568338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93214383-4	33.4811667874136	0	1.353424006107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149949506-2	3.98683310943303	0	1.39122009851247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191334661-4	42.871458996837	0	1.33652603592559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176797453-1	3.53294035400555	0	1.45160085816015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102976394-4	22.4761819151882	0	1.34544042952238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97511440-1	3.60906206191487	0	1.41534399728267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8854210-8	108.18943220435	-0.0994485674701322	0.264821284562111	-0.375530870317215	0.707265692306241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.1785017476721	6.10479042938571
Merged-chr11-121804835-3	6.65958082227109	0	1.37759522172234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81083480-4	20.2297488737315	0	1.34571650720707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120119147-2	8.40689600176824	0	1.36476432900414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124647892-4	13.7599741307525	0	1.34026173031733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34257802-8	88.3379462773548	-0.00344240395799561	0.245360407459548	-0.0140299895718226	0.988806055170772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.40891820688914	6.40650895358005
Merged-chr7-28709682-4	11.4992061313698	0	1.34595848179979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34489983-1	4.03514108219665	0	1.5359188366065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-35293-1	2.35719090364337	0	2.06464613836886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96537003-4	11.9351783237257	0	1.35069044428452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-4867738-4	21.4689938918581	0	1.34806108831495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30487756-2	4.19105881166259	0	1.437217205695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45236339-4	41.0922172366881	0	1.34189391160121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135726139-4	27.0186171066611	0	1.34311306951462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90885980-1	2.55190576225261	0	1.45309606739226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38775583-4	18.1698186827469	0	1.35855958056442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-20064443-1	3.02510014089688	0.8143103103865	1.20544537395358	0.675526513255222	0.499341312427143	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	1.59411452029292
Merged-chr2-131258947-4	20.0120757698494	0	1.34184756712532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115635691-4	19.3305103224073	0	1.34380223007167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67713247-4	19.9676899102013	0	1.33898867537644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29794793-4	32.405511785914	0	1.33629425088115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97777437-1	2.60076825269392	0	1.45651408866588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33194001-4	18.2590020053361	0	1.33605862235295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75789586-14	150.382602898826	-0.138245574435438	0.196514137140825	-0.703489206663888	0.481750930772722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.00117382099949	6.89719020169878
Merged-chr5-66067372-4	37.9089614650364	0	1.33900584202371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3727794-4	13.6019723719113	0	1.34775975269361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31926761-4	57.6501146950487	0	1.34956637991142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60903705-4	18.5967296873772	0	1.33961604748674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125358441-8	85.3630664357336	-0.647352821144167	0.218969162265203	-2.95636524544095	0.00311288222302417	0.0874486639593649	C57BL6J_F1_Control-BALBCJ_F1_Control	6.16090680103165	5.51231930920225
Merged-chr3-79587012-4	17.7914277947453	0	1.33847017902142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54801970-4	20.8774729686413	0	1.33658916846025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145101100-1	4.26318837830309	-0.15296379316605	0.974353684195568	-0.156990008502239	0.875252722520932	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	1.71968126597395
Merged-chr1-94582212-4	27.7058689207975	0	1.34076690834754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142403802-4	52.062830733576	0	1.33320527493293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62629683-4	21.8566034482641	0	1.33519064037794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59578617-2	4.39529918057283	0	1.40019515237317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120142751-4	34.3751500219736	0	1.33821679356163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6747024-4	54.8415368689213	0	1.33533483460578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169994438-1	6.80032540799122	0	1.37669469083595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127472256-4	23.4806944206324	0	1.33562538321529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155054874-4	21.0287452433155	0	1.35042693883262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91719248-4	59.5106188640606	0	1.33372073166417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-200-3	324.1249212434	0	1.3944323525043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27218818-4	25.9471937012343	0	1.33543439555458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184480820-4	21.9502220948442	0	1.34169660221686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3996436-2	5.2233727346201	0	1.44369473630185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13423619-4	27.2554937545836	0	1.35299772041723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60769581-4	24.4375794293388	0	1.34925263129489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90855951-1	2.65085277074434	0	2.17590886192558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-50872820-1	2.62808092314476	0	1.5036691427644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106623827-4	20.1926775678432	0	1.33911053417793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-20557684-1	2.91633702247785	0	1.41698376405697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95291324-4	14.7637899220781	0	1.34212344835866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16047543-4	17.051989217431	0	1.34503167530117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61540039-4	12.6951565791252	0	1.34388001270568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17684039-4	16.8306657517269	0	1.34375310277193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58520482-4	29.2157936751354	0	1.33538269795146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55868515-4	36.7887594854236	0	1.33571804467065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21318411-4	25.2610208626387	0	1.34328364236152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122975163-2	5.0291370421395	0	1.86444566165344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-15201713-3	19.1087673102706	0	1.37383833382782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76152700-4	25.623885212626	0	1.336841970174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13981490-4	16.2995999840437	0.204140949405606	0.871226298433487	0.234314494147689	0.814740834397583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	1.62825810554086
Merged-chr11-89021060-8	137.301559700118	-0.0814140191437734	0.197264131983192	-0.412715775165403	0.679814865641422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.01510582302363	6.93178676829351
Merged-chr7-125621903-1	2.73099387954076	-0.505944205843359	1.33597461602998	-0.378707948319286	0.704904750359804	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.55634759613363
Merged-chr15-12052384-1	3.14276454882583	0	1.41976896130971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122573612-4	17.4787742229064	0	1.33501731418049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40846762-4	30.8923718601434	0	1.33979893013585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-28941282-1	2.33079001704283	0	2.38919756757181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36711977-4	56.1670758760295	0	1.33722792221732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145019624-1	3.31580041696785	0	1.45602953371393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119809142-4	26.1349986878984	0	1.33468733403154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127323132-4	24.0073174281872	0	1.3481068766258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95955897-4	35.8413961711789	0	1.33625189816601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109191609-4	29.9127185591189	0	1.3366771716243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51915371-1	5.95552695933005	0	1.37836139244218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25958872-4	17.2168749499372	0	1.33875766808659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44069317-4	14.0874614774715	0	1.34263517662261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54810317-8	99.7286158743633	-0.253442774204956	0.204040147328516	-1.24212208981058	0.214191519491647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.14508680080961	6.91823658899367
Merged-chr6-122570957-4	53.5292535502902	0	1.33811323446987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97946071-4	15.6337790659038	0	1.34933910276765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128661327-4	13.2146360498213	0	1.34325997289114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60395786-2	6.29122611984946	0	1.8943650453094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138940588-4	28.5349182825965	0	1.35137868081342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43353850-4	31.8144536574226	0	1.34085200782538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89258344-4	28.7777007474032	0	1.33564099722767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96477445-8	70.0213937669944	-0.188865837291261	0.256487532140413	-0.736354846238168	0.461514776355046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24262524843328	6.05512677620659
Merged-chr11-20301553-1	2.70398765791527	0	1.42731524683838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24891698-4	31.4781318630936	0	1.33684975666074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53274237-4	45.0048215211651	0	1.33847068488195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99430860-4	23.4585259214574	0	1.34060457309473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126611030-2	11.8094326525765	-0.38959712615272	0.605590989989112	-0.643333755939342	0.520007557383367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58318860889476	2.55842900344077
Merged-chr14-103978983-4	14.2143406693629	0	1.34953450632633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21608605-4	18.6518387418798	0	1.35599736262351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24698872-4	28.0556556742443	0	1.34101860782323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42924922-4	35.2213179325999	0	1.34323176752076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80172921-4	25.2361160171733	0	1.33620492868279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52600514-4	47.6395768595641	0	1.35555059351598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139228122-8	53.4794309433357	-0.248380457783726	0.298986323728398	-0.830741870351761	0.406119467495634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52913284086889	4.95285127871635
Merged-chr9-41130731-8	59.132178225585	-0.819139221846124	0.260606549022013	-3.14320275112093	0.00167110045747098	0.0539222293272066	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64761945324013	5.81891381064282
Merged-chr13-47226036-8	104.923238935417	-0.282439803291997	0.181943297310241	-1.55235069094298	0.120578334999252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.25112708542418	6.95275354467465
Merged-chr19-3360060-4	26.8019705128769	0	1.36218412939403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-151576258-4	21.129097860946	0	1.33530159533942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99331357-2	3.05911861321955	0	1.93970066581389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37875148-2	3.71591830904425	0	1.48665430405742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85306629-3	6.14370121221002	0	1.36879915336276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70913186-1	2.10898406982983	0	1.57649552361806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19201499-4	41.307893719386	0	1.33357257839844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85455416-4	129.850900138517	0	1.34187096975982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145260242-2	4.04902570724739	0	1.48278277730752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112517184-4	25.2746925828427	0	1.34507804709371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59338638-4	46.1275569588922	0	1.33837038824368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75788719-4	12.8936510030187	0	1.35494785115803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38144300-4	10.6890036762962	0	1.34093374414216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7063152-4	28.8205252486711	0	1.33882969929877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3029453-1	4.49681351550249	0	1.54329066235109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-112256184-1	4.01822040718949	0	2.37854782720541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50528687-4	13.6311949216864	0	1.34844613120905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70939291-1	2.60812949058972	0	1.4434606224191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142695931-2	4.37224591735705	0	1.87443837272154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10550321-2	4.01381077717755	0	1.45148097264338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5506008-8	53.312303875826	-0.0321810476569642	0.207883751754489	-0.154803092523412	0.876976553122028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06268772996639	6.03626196850914
Merged-chr7-107748135-1	2.09442007383034	0	1.49668989469511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91061772-4	28.5250967580004	0	1.33411918141355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64830223-4	16.5396583924199	0	1.33975862541643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90574705-1	14.994343610547	0	1.36646380816994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80762613-1	2.17682687993863	0	1.6154586124452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135758978-4	25.8934944073793	-0.902185609944685	1.11870007159461	-0.806458882816284	0.419978306958709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0.465515277017237
Merged-chr15-66814170-4	26.0333777727731	0	1.33983096805636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34148195-2	2.812694504508	0	1.58586700337971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140537843-4	23.9156795045262	0	1.33481503307028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33770042-4	20.0343167833255	0	1.33705117207188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75047303-2	8.80739113525534	0	1.38515331076417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82996911-8	95.7902258548744	0.0496645288103071	0.260336507197765	0.190770512153255	0.84870539225903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65197557997817	5.69079056063216
Merged-chr4-150656044-5	25.4658964873375	0	1.34524317043771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47744160-10	82.2201595422154	-0.407639388439336	0.223984842675362	-1.81994184771761	0.0687678611707371	0.724385518981224	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9870186927446	5.54735249170179
Merged-chr19-40684206-8	82.6474260008616	-0.432824850257028	0.265768694121367	-1.62857725469868	0.10340254255548	0.930759862688083	C57BL6J_F1_Control-BALBCJ_F1_Control	5.97282946036647	5.55639236753894
Merged-chr1-125473405-4	30.5724961320383	0	1.33201386848242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65735214-2	5.1258754374439	0	1.39886449007132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46774836-4	18.2235963566815	-1.65016841629326	0.914976787460415	-1.80350850306643	0.0713083912552529	0.74030438595242	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98439646562239	0.67591700901439
Merged-chr4-107224792-1	2.35789236654914	0	1.50482678109908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64458899-1	7.34310031213073	0.649976162692602	1.07915106611652	0.602303220652542	0.54697231741184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.13341594473881
Merged-chr1-138348670-2	5.32125884035591	0	1.42678232046606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132364538-1	1.96176926717287	0	1.58895655405768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11425907-3	7.03066106169632	0	1.37670926417404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77284570-4	35.5927150564037	0	1.34592117070205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16467283-4	28.9382359548517	0	1.34414618881556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84420695-4	38.1834252136199	-4.60165581133223	0.540514351865428	-8.51347572076663	1.68795850990587e-17	2.86736676999917e-14	C57BL6J_F1_Control-BALBCJ_F1_Control	6.4626248667504	1.45526469271556
Merged-chr17-74523541-4	33.6505095370057	0	1.34083439765053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38844216-4	11.4596623709673	0	1.34748276324362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47228445-4	30.7414508884576	0	1.33778044412761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24383634-4	29.6520568744837	0	1.3407368317041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127278898-1	2.81840556522855	0	1.47765595906733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23874293-4	19.911621103074	0	1.3477099280596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86124350-4	18.5229854002334	0	1.34424998889144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83645636-4	30.3211539998394	0	1.34025462683001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40557937-4	14.5209868943773	0	1.3639118454871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45088806-4	21.607940469254	0	1.3406771642091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58136310-1	4.54122117276828	0	1.38209019936825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127270458-4	22.0195347912908	0	1.33836659483044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115900268-4	33.4071038670182	-0.0381031305679969	0.392555555893594	-0.0970643008255502	0.922675330769586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22101576841686	4.18399202568883
Merged-chr13-19371221-2	12.8001216679726	1.11955683916246	0.824127090653732	1.35847595820977	0.174312706250816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0995156753045	2.79874750381123
Merged-chr18-77946973-4	18.5296113669415	0	1.34198074381107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33083594-4	13.4986555074859	0	1.34291113953509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62721528-4	14.7819482320962	0	1.34224474526556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8327002-4	8.91310259618273	0	1.36870606028494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81401885-4	31.3585198183934	0	1.33924243325234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29442235-4	14.6484069215352	0	1.34060090043168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112265676-4	36.8358605181874	0	1.33792284779822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141871168-8	125.126711456646	0.351435669453612	0.189683721847653	1.8527455388917	0.063918839520858	0.69352578792701	C57BL6J_F1_Control-BALBCJ_F1_Control	6.91477262395092	7.25856380086817
Merged-chr1-88652810-4	27.1362381648448	0	1.33585014249214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5445032-1	3.11942355787153	0	1.51115738632277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11673231-1	2.09290458917196	0	1.5568761914446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108914239-1	5.78244323997074	0	1.37137559350548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31376539-4	25.3492292608452	0	1.33873531329509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60274082-4	17.7572373315863	0	1.33699278137013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132009946-4	14.9815340810357	0	1.34087626306857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29185800-2	4.41235301036964	0	1.81865691609711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89262541-4	27.9306527769161	0	1.34267592568438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16964178-4	18.4468477296321	0	1.34007112441613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47035193-4	29.0561361296262	0	1.33407493659514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29993211-4	13.6531185096696	0	1.34477092402598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11461105-4	60.4284519297313	0	1.33739952807155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15846136-4	56.4500077671651	0	1.33677157273276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125573395-4	26.7152991232092	0	1.3412772252398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181232481-4	13.697353865719	0	1.34674917214155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117340433-4	34.488281444314	0	1.33623139869851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118522280-4	19.5736640234373	0	1.34274136036352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30628809-4	25.0912269463253	0	1.33714871676119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164081997-1	1.6366820767514	0	1.84518725503963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119267093-2	4.56712955558818	1.01794930691257	1.86811815852079	0.544906274942802	0.58581798034365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr10-95232702-4	19.0701868278589	0	1.34133858228803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43137978-4	57.6971315778406	0	1.33904457652959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122509737-2	5.19449827323158	0	1.9225303988774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22200428-1	4.45877854527587	0	1.39642010291169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125345775-4	15.020259689695	-0.961039252628575	0.977642348564825	-0.983017208736279	0.325598969144532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	0.67591700901439
Merged-chr11-97401901-1	1.96515306993937	0	1.81069817667562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37955636-8	69.2093907289846	-0.086976242550907	0.238163988105333	-0.365194768708862	0.714966022998513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.95509370961554	5.81432120181644
Merged-chr1-82798514-4	16.1288561099516	0	1.35422569343303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19832012-4	15.0251223126542	0	1.34127936439193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8518448-4	30.8362537011404	0	1.33673065055083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55505719-2	3.49761324548264	0	1.45056649433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14244836-4	11.2254344701925	0	1.34718712775136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90833779-1	6.28421554139309	0.231695391927634	0.766659641375369	0.302214150091399	0.762488818065895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5003686806946	2.69069870776423
Merged-chr9-118868921-4	12.5061903996797	-0.0359119857810958	1.34932953338392	-0.0266146889196399	0.978767057346366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr5-120605854-4	10.1076970033063	0	1.34966760369757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73607711-4	26.221301402882	0	1.33542918442728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82906212-4	21.2182143065182	0	1.34166784647425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149765383-1	3.9302770383236	2.93810365092305	1.20636249225716	2.43550646657269	0.0148709587926748	0.265355285960126	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.6575336582811
Merged-chr1-131943026-4	19.6133375011676	0	1.34473229511628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53328252-3	5.23687350164974	0	1.40245019362999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141273016-4	26.5237886690605	0	1.33316609253562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62329101-3	10.8207225139555	0	1.34835662435023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53312134-4	28.8344898619536	0	1.34204755641532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163251857-4	28.5590943810245	0	1.33380052444087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152796963-4	34.5815977111049	0	1.34079336101688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29383610-4	36.9066819519218	0	1.34309280824774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55805483-3	11.8031934996994	0	1.36826310467391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36879868-4	20.5339465013353	0	1.3394882156871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20915261-1	2.34105495461961	0	1.61222179349954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120666682-1	2.98635464980238	0	1.45633923500086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65881799-2	4.7766608890583	0	1.4589918342634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75683091-4	24.3475715008136	0	1.33843365735909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92791647-1	1.61639345177874	0	1.574191435542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91412528-4	42.4542609387888	0	1.33605613721726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75185963-4	20.4170338030437	0	1.35978896136288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136185549-8	67.6926795270768	-0.0706944815184589	0.24690749253257	-0.286319709431797	0.774633263794402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.93117024144082	5.96331360716432
Merged-chr15-58019772-4	27.8627668025004	0	1.33630794734956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84583569-4	19.858369677973	0	1.34068635485861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47022713-4	55.884719430923	0	1.33566120941158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76537658-4	50.4111465874241	0	1.34357322794361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129234114-4	21.6461934885026	0	1.33811714430256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114834819-4	17.8708213404377	0	1.34158440133965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160067010-1	6.12563413566828	-0.0328598505102859	0.784345759777422	-0.0418945982695319	0.966582722575621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04403056204475	2.1158827559191
Merged-chr1-136141722-4	72.2440264650669	0	1.33978121917819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95318963-4	11.6855110138263	0	1.35025934115052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97992530-1	2.52702240234542	0	1.40505990708982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75689103-2	4.51532052034663	0	1.39378367386305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-8694293-1	7.84914326854142	0	1.36304210614602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9334995-4	19.3659842461406	0	1.33916681892226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100022719-4	18.3065467118557	0	1.33513860871545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17857480-4	42.1492336287057	0	1.33932148078364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65140663-1	2.89448084906659	0	1.41896728380683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69244873-1	2.86483881076043	0	1.43361036935497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-50560-1	4.48099425639569	0	1.59390908181378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108856129-8	73.5212056705934	0.286945427818598	0.25871912245838	1.10910018978114	0.267386963045756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.85599144923154	6.12644480420165
Merged-chr16-57569151-4	17.3132819723339	2.44535890953287	1.152908465944	2.12103474106299	0.0339188789473791	0.458652631083437	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.28067447403188
Merged-chr5-112280344-4	32.7733852197944	-0.615684343996602	0.857328971391423	-0.718142468692458	0.472669446746179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55248074938811	1.56277881816808
Merged-chr18-80224481-8	105.657855501657	-1.07871800577235	0.188131417732144	-5.73385359434326	9.8174082659737e-09	2.27091274863857e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	7.08031957861596	5.99401635095525
Merged-chr13-45903754-4	29.0087869655532	0	1.34021803890592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136142873-4	27.4321106852931	0	1.35720870996933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36538810-4	12.7443050423593	0	1.35229514240112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21041570-2	4.78816706755614	0	1.39251434606402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97857899-4	16.4616371662141	0	1.33934298575831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39378475-2	6.05195736626084	0	1.47605231638678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27690275-3	35.2122667377447	0	1.33431115767891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124259365-1	3.34839190957551	0.757797752470665	1.20574588863939	0.628488771648058	0.529683799942848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	1.62518823153097
Merged-chr9-53703198-4	10.0843262811461	0	1.34588839459375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19777585-4	22.2438084070682	0	1.33639764247078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45487932-4	28.8351892836849	0	1.33840020529641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81751326-1	9.17804066628007	2.10823888633536	1.17186406320971	1.79904730635816	0.0720111978873703	0.7446179771656	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.39949824061849
Merged-chr16-24495689-2	5.73151602594356	0	1.39659891143437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44657208-1	2.06244682449661	0	1.58444399699129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36508431-4	15.3406016254329	0	1.34187872223506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60115365-4	44.8855546954867	0	1.33618815286689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37112883-4	14.904606378029	0	1.3391033667323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120257134-2	11.6793500594797	0.623416381658338	1.37739776904908	0.452604465947938	0.650833582367066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr15-38644376-3	38.08897589	0	1.33656392026257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191875904-8	79.3727260520034	-0.117344157421256	0.262794203286584	-0.446524907907838	0.655218124559436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82529910622323	5.66128172056713
Merged-chr16-91001302-4	26.796447495949	0	1.34070331980474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3895656-4	25.293110118258	0	1.33662924867225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115307647-4	16.4361871418806	0	1.3563928871982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-14823403-4	12.4021094024694	0	1.3440497530222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62855649-1	6.22860752921626	-0.569526969218994	0.885017020379837	-0.643520922314649	0.51988614326053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65588440136773	2.28242002473277
Merged-chr13-51996423-4	12.8723659944472	0	1.34761286311885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120436065-4	28.1828135432251	0	1.34159735987729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95673897-4	38.4308453554632	0	1.33700480842701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124498363-4	15.9993297641828	0	1.33867708452775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145214612-4	12.8340026244835	0	1.34766584271228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35495645-4	30.1460789362211	0	1.34034611893622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79278771-4	35.3724163283376	0	1.33584523544308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67481936-4	48.6293389462102	0	1.33625039146126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121603018-4	13.271243733535	0	1.3393191600862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46886072-2	16.8313144514673	0	1.34496052387153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-52046647-2	4.399631116036	0	1.402230378184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84412760-4	18.6416625592516	0	1.33935207412071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34307259-4	14.7131777043026	0	1.34508150285224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60733902-4	14.7303416460703	0	1.3448738033214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62720168-8	82.0366450722935	0.650987680218919	0.225763536196088	2.88349346040319	0.00393290812992668	0.10383144877838	C57BL6J_F1_Control-BALBCJ_F1_Control	5.88700081444922	6.50586888658192
Merged-chr6-148578281-1	5.64741956669956	0	1.39829970500942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128200729-4	96.6908345928569	0	1.34210683428953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113647381-4	28.7391197127254	0	1.34196995969598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131760201-5	24.330451207147	-2.96348038993682	0.829251055833971	-3.57368298669994	0.000351995054363093	0.0164949130690719	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65364879963587	0.904676873936758
Merged-chr8-116946540-4	15.2958342918498	0	1.34314087789436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167484047-1	1.44210691463957	0	1.60251475240978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49197004-4	40.9671106708988	0	1.33624255746005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23135971-2	7.47283911498522	0	1.36091028420864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37376410-1	2.2828985674926	0	1.4158688695056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79214209-4	39.0976580433116	0	1.34153648513378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25190907-1	1.61720993837226	0	1.63218858780472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153198693-4	57.0668405070108	0	1.33729610165557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102758398-2	3.83171586924403	0	1.60297219012897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58774107-4	10.8516546415257	0	1.35222403930426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121841661-4	39.1993236785781	0	1.33221540776003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101254094-4	40.8025049327672	0	1.34059151037065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10433556-3	26.1669913438098	0	1.34415847555169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85523904-4	44.2901543141224	0	1.34204196688147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20105389-1	1.69965847256135	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83694426-1	3.08251351061713	0	1.46311751527663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55753592-1	2.77068960435308	0	1.41534188319074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128690736-1	3.02022041690289	0	1.46254569093489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60528002-4	24.6610828172627	0	1.33522650321016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60086404-1	1.77493934351055	0	2.1488361253083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16330430-4	18.9328924379178	0	1.33564893858838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36720390-4	15.1352630493728	0	1.34577518342936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56269354-4	32.9786893110646	0	1.33880196612124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105895428-4	27.9434613889795	-1.42774895159443	0.911234055029443	-1.56683010661657	0.117154408179168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45575152610536	0.724326877898254
Merged-chrX-145505243-2	6.00291914344047	0	1.36389120504887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62057671-4	33.601023573863	0	1.34026429531544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151663141-2	5.30630603069769	0	1.4483240254252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37222348-2	8.45539458340903	0	1.40409642574575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88341773-8	107.279985822769	0.048135003566835	0.149945440322806	0.321016787594267	0.748197668995139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.32192788346466	7.3778858832258
Merged-chr14-73410278-4	15.3251444810563	0	1.3442426985201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32760672-4	22.9680731052692	0	1.33658037163764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23908454-4	35.4935300896669	-3.68298257236313	0.507226363253739	-7.26102355709127	3.84172026439607e-13	2.78442762469741e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90549237414559	2.06611709152988
Merged-chr1-180314858-4	14.2972289411878	0	1.34304545648989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94246143-4	22.1949353304397	0	1.33914703578255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70787180-4	25.3497074086199	0	1.33825977405612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38568357-1	1.9202994826782	0	1.80967343024499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111559823-4	23.8989050459757	0	1.33697795461497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143059647-4	25.4977897966213	0	1.34183030276323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124240687-1	3.69422582792859	2.65633411321259	1.28791257465964	2.06251120260596	0.0391590921140522	0.500740787632971	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	3.85989928528141
Merged-chr7-19303355-2	6.48742833827823	0	1.74521063267842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97466802-1	2.6965076446936	0	1.44497885733068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57301670-2	5.68333187910833	0	1.43823930356083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94433635-4	21.7687129319813	0	1.33982014283491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83616443-4	26.2518371970551	0	1.34078950658973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74430928-1	4.26947712716858	0.125121976872693	1.0010950812832	0.124985108020222	0.900535339964406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30603644779433	2.5974210596722
Merged-chr17-46747470-4	27.1276688591564	0	1.34858945415358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61961015-4	14.6720156481174	0	1.34139118210277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53149898-4	48.8544439239531	0	1.34466567747012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124858785-4	22.2802198075867	0	1.3495375466237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68060868-4	29.9833475888135	0	1.33726547658557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91728080-4	11.8040414222601	0	1.34474287317785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144900058-1	1.90409082366705	0	1.52501354415136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81982726-4	18.7367046430963	0	1.34297367419564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66360456-3	6.13412643964239	0	1.3802732358053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-95852834-1	2.84433045849385	0	1.46671755915397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31594766-4	31.8823525659717	0	1.33554240944814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105568301-4	22.2910860153653	0	1.34032638504233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29380762-4	12.8917951514562	0	1.34228707054687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-123934164-4	23.7978326003597	0	1.33509201527974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62046489-4	22.7453591957127	0	1.34027401682885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102425632-7	44.4688967914474	0	1.33934330356062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115997104-8	43.915390157757	0.0126698007627312	0.298456249226172	0.0424511156847314	0.966139080623073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04290520033888	5.16683904697119
Merged-chr4-63753119-2	4.04717077419696	0	1.63680002549851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63721740-4	18.5269515569455	0	1.34564237780469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109968023-4	20.2859333112106	0	1.33797763563609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12033947-4	24.0850372244142	0	1.33583014619132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129570897-4	21.3576920179489	0	1.35192876079961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46331007-1	1.54497777297579	0	1.66904893503174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87255875-8	111.781841131908	-0.408219877946711	0.189089545972898	-2.15887068661755	0.0308602006051031	0.430577424202464	C57BL6J_F1_Control-BALBCJ_F1_Control	6.94183804591535	6.54324373342861
Merged-chr18-55146879-4	13.6940564759518	0	1.34700383958348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128379022-4	16.8424565245798	0	1.3380789833697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167656908-6	85.7651560545021	0	1.33304144874807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36730889-4	11.5348466120404	0	1.34145182073373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34368158-4	32.4966969558414	0	1.34276820640677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110822542-4	19.3657493390159	0	1.34537779882269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58508551-8	52.9858442349844	0.286497965302535	0.239342007909948	1.19702332158226	0.231297464799312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83028388129336	6.12169428295637
Merged-chr10-117720042-4	20.8814743003077	0	1.3408385596893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120776262-4	14.6374362842881	-0.406076622912597	1.04181364748949	-0.389778559621617	0.696700299274101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.67591700901439
Merged-chr8-26981850-4	20.9598045738007	0	1.34046126612356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86774727-4	19.4577323053022	0	1.33598666353197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121371730-4	21.7002000546676	0	1.33850298760876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140983548-4	53.2828207103109	0	1.33743239108716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83895432-2	4.00479901959467	0	1.49290051467956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56109256-2	7.19113897276032	0	1.41096754166986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150851457-4	22.4790819065457	0	1.34952033640435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116668409-4	30.7267285050815	0	1.33657299978208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72782308-4	13.9392047779331	0	1.34671720176447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12468688-4	29.3464493802045	0	1.33651346166545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29841894-4	16.0387783843096	0	1.34234895643905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113590423-4	38.0692305032916	0	1.34079694069546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111936149-4	55.8039264339503	0	1.33440270584757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136569397-4	17.7800016755048	0	1.34030705178895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37013182-4	19.3396403829758	0	1.35139877330654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103721898-1	2.17286929981485	0	1.60065398394137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66140331-4	16.1826777541893	0	1.3429896519321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115398208-4	36.9684163254119	0	1.33605933510495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120316197-4	36.5556016959826	0	1.33576745069606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12170442-1	6.37877152392411	1.25350991903579	0.939827986364466	1.33376526047573	0.182280799439739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82166021832917	3.27925872019863
Merged-chr15-50703993-4	41.142840138052	0	1.35771339290306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4536845-3	9.1947567995821	0	1.35050744411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44660019-4	46.173128277785	0	1.33981001136557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25214045-8	168.2105904901	-0.161765191516487	0.1995175327177	-0.810781836127509	0.417490967271805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.34931325113116	7.18524991548781
Merged-chr11-69410434-4	37.3393857763574	0	1.33496460626858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32181386-4	30.5507883278695	0	1.34740961814543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32575407-4	19.9752646436686	0	1.34070210444995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52822879-4	18.4376630271701	0	1.34729074631437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7648989-4	50.2326412976848	0	1.33563802552427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34905162-4	164.412939985583	0	1.34205533240811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81433065-4	45.7760491390252	0	1.33794381759327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80775385-4	27.2197831233379	0	1.33910380721977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55652517-4	34.4254999921868	0	1.34518039295112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53370139-4	44.6529905686469	0	1.3343416777728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38371894-4	39.5012627250908	0	1.33602039636914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37464099-2	10.7889110782987	0	1.38621378796104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55514910-9	86.8761002462996	0.00213676581427965	0.216652010801087	0.00986266320067281	0.992130860878639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.9278153129104	6.86315187762438
Merged-chr6-24989396-4	18.4412170601511	0	1.34483252512168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121191430-1	3.18718138834874	0	1.48833458921319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85992201-4	21.2618716813296	0	1.33706905323991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34053659-4	31.8569221422388	0	1.34270421716069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34089678-4	14.2765031237685	0	1.34783983658474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-136321911-1	2.25298706507845	0	1.51523891151921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77750719-4	59.0577774506555	0	1.33522572912084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13513964-4	17.646881714293	0	1.34457578932006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84967207-4	60.1806339494389	0	1.33478489564211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39415780-4	24.8897029699329	0	1.33904977687406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31837630-4	11.9584588252803	0	1.34227227584863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95548705-4	20.3197464098553	0	1.33793291470472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63999806-4	25.9550598064307	0	1.33760391114565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153145551-4	12.1763210846981	0	1.34793139834401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79848886-4	27.5417602018846	0	1.34367330969241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55570083-4	18.2603819160241	0	1.33948834260104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79225103-4	14.3276540541217	0	1.35534301118326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71745460-1	2.49880555431555	0	1.50992508895962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5931000-2	3.84047463456978	0	1.41524455802098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16159751-4	32.6670814785487	0	1.3358748824128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127602750-2	7.72352584589804	0	1.37936233110868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92055547-4	14.8404007898374	0	1.34227115392234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3174419-3	88.8494987520597	0	1.3507519754508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117262863-4	14.6159317877648	0	1.33984032292159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132114722-4	20.6204271448281	0	1.33860331081044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10873079-4	11.8791316903632	0	1.35826762392289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114812165-4	15.204077781699	0	1.34133912767266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149710710-4	31.8414751567571	0	1.33638036290881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53353604-4	68.5537593169058	0	1.33794069973249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-138919716-4	21.2638410998217	0	1.34050363716931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-147799170-2	6.32141036847535	0	1.39997488905959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39360007-1	3.19485250867487	0	1.44262172334998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11713655-4	11.047472947009	0	1.34641964385022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76303875-4	31.6399899884063	0	1.34313173332323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-11716285-4	48.5639039695747	0	1.33677937731383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62066385-1	1.92777501093805	0	1.52145630236636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66355136-4	18.1647101586532	2.70192632549635	1.16356010935161	2.32212010688643	0.0202264692961219	0.322715187692365	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.40024388691264
Merged-chr8-111527390-2	3.49793987838487	0	1.46303504723369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20835393-4	45.8147310196198	0	1.33676973632242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138207408-2	12.2295235093606	0	1.3534078198019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164815541-3	11.0832390332235	0	1.37330669050401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193160490-4	25.1490964835867	-0.154897491554891	0.619836657972578	-0.249900501305528	0.802664295536668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30735293279092	2.16916817165184
Merged-chr17-84101849-4	19.9190524567226	0	1.33862452958611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21127562-4	62.7157817536608	0	1.33595294505601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103606360-4	22.9592633245938	0	1.33702151430048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45280530-4	11.909033479515	0	1.3484181806014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145434284-4	17.6483887329163	0	1.33677058116769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117338847-4	15.1880264545914	0	1.34550868479778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146261186-4	49.6629066954043	0	1.35897133029778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62046508-4	20.848638361309	0.486105042507864	0.89077270669691	0.545711648833964	0.585264163332684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.25298535761957
Merged-chr4-149155894-4	32.1700306319835	0	1.33646064879998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101143834-4	20.9937714960255	0	1.35193032262687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56451848-4	27.8523070461985	0	1.34186130459629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139555992-4	18.8584271830022	-1.45186081584303	1.07567927855343	-1.34971533317578	0.177107312046262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.55634759613363
Merged-chr2-45220011-4	15.4343022669958	0	1.33960070457975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112443599-2	4.55203701697523	0	1.58873969647028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35131755-1	4.47473408317249	0	1.51693089223132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95775716-1	2.17638558136793	0	1.44796182297693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91034344-4	14.5549433195528	0	1.34035382248578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172420679-4	40.6250237667774	0	1.35192366561215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3291194-4	12.1074444321453	0	1.35157187461042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79878313-4	18.2411681314142	-0.812983964700335	0.502706427054287	-1.61721418495519	0.105832055441879	0.945022843889734	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78231888886052	2.44720710929267
Merged-chr11-3151495-3	10.3031883897397	0	1.35103185614348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24593740-4	29.4391376166222	0	1.34047720316636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152152231-2	4.69720329617807	0	1.39825841851936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28012378-4	37.4182638782568	0	1.33493805541323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43727810-4	16.2875984133891	0	1.34440638383369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28732794-8	72.0853178656376	0.654598404066391	0.263080559528659	2.48820515373384	0.0128389647067558	0.239701383552612	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54858745517226	7.2407441940232
Merged-chr11-68655741-4	36.3076541632065	0	1.33560211837588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127118050-4	17.6592867252736	0	1.34397700644589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132608445-4	12.8506023250395	0	1.34212996002659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126839228-3	21.7880193693882	0	1.33616939650925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-48025-1	3.19333391997837	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-6717349-4	45.9156304846655	0	1.33845084537875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123552009-4	18.8209131562962	0	1.33841864678801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132112470-4	20.3392345585096	0	1.36364194497309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126869172-4	39.7773657453552	0	1.33434369383397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86442214-4	21.3515026744322	0	1.33541022373129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80711656-4	21.4870104571026	0	1.33984774083513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88567364-4	46.979462901311	0	1.343669407967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98672755-2	3.26515101390116	0	1.55186137444798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53195058-4	21.9248129041264	0	1.33982856258714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128724725-8	146.341959016783	0.0821217372569989	0.157558037669885	0.521215791155383	0.602216454880945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.5460266157942	7.62447824722141
Merged-chr4-144909020-4	21.0263638645788	0	1.3358189895145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58425971-2	7.47161139013941	0	1.40629739549371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11038560-4	16.4055631294073	0	1.34084640107966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111777478-1	7.99615347659093	1.73528614872311	0.780095551143698	2.22445333290134	0.0261179589836791	0.387485298142416	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63003640177516	4.45879023405024
Merged-chr6-56652423-1	5.89031471960207	0	1.36814505999737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51882095-4	13.433978065103	0	1.34578909884744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26483718-4	42.5713146384132	0	1.34236245188298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47014765-4	33.8903050096628	0	1.33493929655159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61244900-4	26.088396787329	0	1.33783094874475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93757078-4	22.331087528392	0	1.3405518663991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103343673-4	44.6541541126254	0	1.33883932043942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149840489-2	3.80241975561953	0	1.41530792626372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113009634-4	18.6147358134395	0	1.37369578480435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8637138-4	39.5581622465464	0	1.33989192968836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30913269-2	4.6154788512853	0	1.51493221404063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65153736-1	3.35946254263887	0	1.43577080626086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83009703-4	45.3013426941086	0	1.33750777390716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59565994-4	16.937282870717	0	1.3434445789647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148522230-4	53.1811237864264	0	1.33842888735371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-64875978-1	1.96586773418483	0	1.517869588389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99182386-4	96.125439367743	0	1.33694729400213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-81587-1	3.95193656745574	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75024991-4	20.0846694524891	0	1.35519695611573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100567365-1	3.09693526764821	0.618811223528464	1.42503032282359	0.434244249836267	0.664111083235758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr5-10682972-4	15.604461821513	0	1.34910170142098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23307656-4	17.0032125870129	0	1.34578158899859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110313607-4	39.3648899113079	0	1.33919517836494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9914573-4	33.4167183595589	-3.11824048838053	1.07847661087533	-2.89133807533356	0.00383605215008228	0.102017592380784	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	0
Merged-chr5-29839655-4	12.9746186129475	0	1.34322059445348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54918076-4	22.9322568278457	0	1.33911996778761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53925599-4	27.8088500389457	0	1.33341667430348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24487859-1	7.38990925980902	0	1.41698085499122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123910582-2	3.39424028877614	0	1.633608127553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34186170-2	3.56188753447711	0	2.13300991843668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3477569-2	3.05705201357	0	1.43530320791714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13987529-4	10.9426422479715	0	1.35327387764908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70999692-4	63.9010971970827	0	1.33486863828445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88138424-4	29.9672217466519	0	1.33556076420415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67598722-4	81.3786555848545	0	1.33569129339922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102944270-4	59.4656928748571	0	1.33941601573111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25302832-3	10.2888752021544	0	1.35157035749427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11341356-4	22.5184332515785	0	1.33429538179505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-86885694-1	5.87865968580644	0.816623970989287	0.904365475378921	0.902980037630394	0.366536489723692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24287124256397	3.11093905073824
Merged-chr1-63119905-4	15.580589068273	0	1.33700776569789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165642477-4	30.2785670672959	0	1.34340899343102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36648712-2	3.20033307438755	0	1.51826540773991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39303494-2	19.4133295914125	-1.77819096924095	0.758115388287283	-2.34554132090394	0.0189994724783339	0.309732659387901	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11038056962808	1.0754104773304
Merged-chr2-160208469-4	13.2004783283027	0	1.35564255854429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6256972-4	9.36964784191446	0	1.35887124029241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36187301-4	40.549190933222	0	1.33556263398804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155065460-4	25.6770795855599	0	1.33853355134658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46818313-4	17.5326525780077	0	1.34019935960842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50854596-4	15.5135505605801	0.125064279608329	0.557965606724035	0.224143348803549	0.822645762992567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98923977879559	3.07684945247441
Merged-chr6-124505220-4	18.9679734229128	0	1.33600686869713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52133416-2	5.20015152542154	0	1.48566846397771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62165063-2	3.37870965518569	0	1.44060444598081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-168779296-4	12.2350842572599	0	1.34937861218081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46558883-8	118.780568018579	-0.715379251425761	0.171580323834054	-4.169354827175	3.05463111989326e-05	0.00220306582898029	C57BL6J_F1_Control-BALBCJ_F1_Control	7.15877445614635	6.46697458603047
Merged-chr2-68434075-1	2.68088149263424	0	1.4530562873227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64943967-4	13.4991692697932	0	1.35127347568918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73569207-4	12.7415700852019	0	1.35358926488578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67836446-4	12.7464076628021	0	1.35455637696047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104122007-2	3.99768981191581	0	1.46203565835851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52842771-4	22.2948688185159	0	1.33686287755545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120369134-4	12.1365547869343	0	1.34462220930396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26512627-4	15.1092919240668	0	1.34381730435333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133353605-4	13.6605703316728	-1.33215107249856	1.30449368644912	-1.02120162507242	0.307158922585212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr17-50171138-2	5.76492291221633	0	1.43439569127596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172423555-8	115.48662999124	0.806471470406207	0.185417016782639	4.34950084086196	1.36447760698081e-05	0.00113585969736401	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00602804481013	6.85199851227046
Merged-chr5-135463581-4	12.1956551335437	0	1.34392124661906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80043631-4	45.8531059860677	0	1.35101345883073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62219018-1	3.15566436769236	0	1.43189273185759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97211398-4	45.2918333247739	0	1.3338457890988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52615278-4	45.4305235077018	0	1.33507156012521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11596848-4	34.3409700536967	0	1.33974710870916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154097846-4	19.8853607425815	0	1.34412132811905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31197978-1	2.40086673880613	0	1.41259242266916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148886031-4	15.4623381870723	0	1.34213961259895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48706465-2	3.42927029629131	0	1.46377960267722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57391626-4	41.2457362806661	0	1.37206229608331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70061828-2	11.8552007627644	0	1.35451721659448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69458533-4	12.1489181457885	0.5752948485926	0.650476997226315	0.884419973412899	0.376469544833734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01888840934885	2.40093244346002
Merged-chr4-8842989-4	58.1829010398896	0	1.33608491458605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21265790-1	4.92528811147459	-0.256950063458801	0.717769451484321	-0.357984117222372	0.720355199591274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30983433996409	2.52668373719919
Merged-chr10-78364270-4	32.8963020377327	0	1.33412183461263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53385766-4	36.6940773361529	0	1.34285778659141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33530764-1	2.2996889530217	0	1.46320843780942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117216281-4	25.8095090356514	0	1.3383771193689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84807854-4	44.084049721444	0	1.34299168445052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127270617-7	51.9536486588737	0	1.339484167809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103175221-4	13.5697495608793	0	1.35838381183167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109682325-4	18.6784676362534	0	1.33642773843081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92065467-4	26.3549070709067	0	1.34656141140065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110980158-1	3.98463247943226	0	1.38941448460737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16053344-4	14.9060772988784	2.65861365563969	1.11082514637909	2.39336826709935	0.0166944751044468	0.286185737055384	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.40024388691264
Merged-chr18-82862322-4	14.285253094487	0	1.33989519377332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42847325-1	1.60320820639685	0	1.87636276870183	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-13592767-4	29.0280498058838	0	1.33809034595671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112693659-4	45.0125907317917	0	1.33600484876265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113038099-4	24.1898588983206	0	1.33749678339549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80025241-4	42.1329615414449	0	1.34101722420146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23246786-4	34.8670980323718	0	1.33175121752609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20532628-5	42.0402381307811	0	1.35022165141468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68140576-4	21.0875899930794	0.305205185565231	0.673196112977697	0.453367420996001	0.650284191796477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96913654244652	2.93165128301412
Merged-chr11-19929316-4	14.9948060913054	0	1.34722187449324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36216654-4	19.4505955762194	0	1.33709834280722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-42871867-2	3.58795452308284	0	1.44785430943878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-5119908-4	25.9948278359819	0	1.34766361609007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43920013-4	22.5377465497185	0	1.33680737564376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148486377-4	50.2462028768009	0	1.33372399994016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32407481-4	53.622892888163	0	1.3406328432423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140947158-4	34.9701003475855	0	1.33869521600739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111390065-4	27.8978456875783	0	1.33556689791676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101864142-4	13.6811673208553	0	1.35422369080694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14135201-4	13.2787896613598	0	1.35187550915649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152025432-4	18.6787842043973	0	1.35342879496223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47948414-4	15.8775268755188	0	1.34344559610172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-104488262-2	5.33172842839994	0	1.39634088184399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62216910-3	40.9282604251272	0	1.34236130581497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107831346-8	105.614190151865	0.175880037235181	0.200648784868574	0.876556702550595	0.380727465232637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.39995789586567	6.57800847066675
Merged-chr10-96274168-4	12.8713099185422	0	1.33845955351227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95632905-4	13.1863093881552	0	1.34468721850101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-42194107-1	7.67217489004155	-4.15889275038468	1.07312404790589	-3.87550046846906	0.000106405775098511	0.00618592002592286	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65364879963587	0.413263464506793
Merged-chr10-51416880-2	5.87779056110923	0	1.41988355932388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108631270-4	34.1156980251358	0	1.34087300999651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55525311-4	26.8773694729889	-1.85432554131067	0.779704904517892	-2.37824019134168	0.0173954906737144	0.293028874645999	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36453465698696	1.02748994520012
Merged-chr6-97492709-1	6.09276138652563	-2.01334339551784	0.83684477211307	-2.40587437791368	0.0161338115066687	0.279305050857008	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16531447390776	1.71211927186986
Merged-chr18-80465894-1	2.42474971900678	0	1.44441942395082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49371665-4	16.8926881120196	0	1.34001960446147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103477394-2	4.60811675208646	0	1.65374941095267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81536312-4	20.2920038841212	0	1.33586514652923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55547345-4	12.7109193501153	0	1.34697927601401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167892105-4	12.3963662367147	0	1.34312341283858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46450577-4	29.8138546797812	0	1.34682747611824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109750506-2	5.0153634885659	0	1.4069195331263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43253231-2	12.8580406822094	0	1.37193744469061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85593158-4	22.2178084641384	0	1.33949419789513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55256437-4	16.6491374040012	0	1.3524054577704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3359538-4	24.6748395573437	0	1.35959320439161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-3605-2	317.205166945606	0	1.39743274885337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129035273-4	19.10226898051	0	1.34238475452212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176075636-1	3.09896414859954	0	1.42903553936417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52198613-4	15.6972186008012	0	1.34069069063085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-2429-4	472.702823785967	0	1.39924877902029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113752447-4	12.2432466432765	0	1.34530954997709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78876229-1	1.91831202280844	0	1.69234164721186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117891284-4	16.6855988161208	0	1.34797810857869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121987484-4	18.9199518804603	0	1.34222263999252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93969502-1	5.81397099927172	0	1.38075740132599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36633287-4	11.165894947621	0	1.34992379758594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140731233-4	15.6559086650732	0	1.35044356699109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73397117-4	16.9376914641922	0	1.34305525596485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52565252-4	17.831772183133	0	1.33635071067136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34485937-4	20.2649580917022	0	1.33851772249124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102394608-4	21.7398763880516	0	1.3558454614271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15761405-4	24.3900024382605	0	1.33472432335641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99414471-4	22.3270345699044	0	1.3378785091476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126684167-4	26.8372522557552	0	1.3392290676682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88710023-4	19.7292795855583	0	1.34936637540789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36563335-4	28.3981876196384	1.58329761010971	1.03683420201823	1.52704994398119	0.126748592614123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.70266130792036
Merged-chr16-44778946-4	20.8846185677904	0	1.33620206285651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90237585-1	12.8287309201786	0	1.36892443930711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90459204-4	21.3184308041178	0	1.34630253303797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52060507-4	81.6917856026667	0	1.33979575305299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86047563-4	31.1503684938007	0	1.35418804228382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4080074-4	20.6957708577209	0	1.33808932926391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177490011-4	23.7401740731193	0	1.34177249472246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17629262-4	24.5324407361502	0	1.33841521679026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62055456-1	3.34219723994898	0	1.42740430222593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98775001-4	24.2055539233797	0	1.33548530521704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98894624-4	28.7896882266763	0	1.33535296965403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20943554-2	3.08248638075435	0	1.40831372822425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24638804-1	2.04554228483151	0	1.51071547085264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46371231-4	45.0167781539766	0	1.34262180424851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44466032-1	2.35320972440787	0	1.59025972157096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20787087-9	121.184015318473	-0.0869606360071423	0.217289200879032	-0.400206893188191	0.689004137918869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.81513420947662	6.72403741225526
Merged-chr11-103223602-4	17.1730018515822	0	1.344033686802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111579727-4	25.1111697476916	0	1.33904377046927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85594620-2	4.32645274222706	0	1.46862127329602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9082361-4	29.3821876278011	0	1.33419006355647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116482917-4	11.8391914538399	0	1.34425029798067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105655685-1	2.04477803321571	-3.69819510003523	1.4195476764152	-2.60519259865532	0.0091822628092084	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23301905435935	0
Merged-chr3-61344265-4	22.9568591282566	0	1.3544801695309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8837661-4	27.775111000107	0	1.33826972555853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132695794-4	13.8083688205435	0	1.33972780579319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80614894-4	21.7662806383117	0	1.34111367838109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111178357-4	12.4918332546414	0	1.35242927498729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30468985-4	65.1720784385956	0	1.33493090688796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149975566-1	2.89589318177521	0	1.56494302218186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112232828-4	44.7875577972434	0	1.33527127124933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91928056-4	12.731197620479	0	1.33919259931177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80054207-6	32.3885705526083	-0.0347301285879916	0.47213097685461	-0.0735603683947359	0.941360207102437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74749383896444	2.78525903901626
Merged-chr6-140561234-2	5.02020159685163	0	1.39817564696638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107758507-4	20.9803449115616	0	1.3386054686899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39241173-4	22.1730684272263	0	1.34163017189557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91617403-4	18.3271657233578	0	1.33825465444038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100032749-4	24.2341376602781	0	1.33431941917502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-44254-1	8.61226217030367	0	1.37609903727563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80054475-4	26.7017740088624	0	1.34189073790433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49190829-1	2.70904246963186	0	1.46565364444045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143043141-8	55.2960546985555	-0.466493383560699	0.244739410666744	-1.90608199263792	0.0566395686171497	0.642636257662208	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20975319881589	5.75398504172955
Merged-chr2-38282334-2	9.73769935174258	0	1.41096960949915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65934992-4	12.4165585157246	0	1.35343604152542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101826497-2	4.08172529507277	0	1.89111426755278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144290514-4	33.5080430542303	0	1.33385091113626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101293213-4	32.7256520286516	0	1.33574176482029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85385913-4	45.3295135134767	0	1.33867464788195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25854211-4	23.5507986022874	1.75148076151186	1.22051127516733	1.43503857534765	0.151276105442284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr3-31390143-4	20.3293275160861	0	1.33853267955118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16038733-3	8.36723981942636	0	1.35700690524485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60341783-4	12.7039241274132	0	1.35058142469691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60999283-4	24.6967894833169	0	1.3391848568512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89248280-4	19.7157816027341	0	1.34151191200573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98815340-4	18.843953678203	0	1.33793470392255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69423011-4	20.0977737973555	0	1.33917647953713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30641953-4	22.5321206660948	0	1.36110187293854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132601504-4	22.6748077052218	0	1.33950991126136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66852116-4	28.9128275647067	0	1.3334528545482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161406569-4	61.8947544635103	-1.12445293964566	0.678544025019765	-1.65715546550263	0.0974880477223584	0.896220663984387	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38948412729021	2.28092349724659
Merged-chr3-96226927-4	31.0587205672043	0	1.33461581437608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126019166-4	31.6068870822602	0	1.33905743893127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140765026-4	24.8464491122697	0	1.33507212174525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105623098-5	43.5251725514949	0	1.33420162693828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45750137-1	2.31184392027556	0	1.51976433423597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57742930-2	4.2257408112854	0	1.38776837973987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55798221-4	19.8175131064364	0	1.3390191869751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20887023-1	3.91404255958936	0	1.38126725094376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25120576-5	65.0036871235186	0	1.33205571959787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110645491-2	3.50839511562895	0	1.4152847681047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170939453-4	19.5835869147656	0	1.33569473170126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88607577-4	20.6612704412571	0	1.34457447186451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95797378-4	22.5908281901537	0	1.3392878518025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-8376830-4	15.7665477435472	0	1.34729951697027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98785891-4	26.7972078638125	0	1.34120091029348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46265606-4	40.9490248127525	0	1.33676154844133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33160666-2	6.70993683963124	-3.30740095496603	1.11387328934231	-2.96927934856836	0.00298499101384647	0.0845991274878416	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97815176992225	0
Merged-chr12-114378936-2	7.85751947526652	0	1.35328031154698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61135380-4	9.88402682201142	0	1.3499717174294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116655310-4	18.6190608179437	0	1.33867402933243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31009511-4	16.7770265702655	0	1.34614893715336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26577004-4	13.6654083260603	0	1.34211720849441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21220692-4	22.8200243983915	0	1.33840188492102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9759291-4	20.6660970654205	0	1.34520178237102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12005727-4	14.7950269294599	0	1.34336060418263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62756015-4	15.9751949368978	0	1.34652229917334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69201116-4	31.7712300097221	0	1.33460861659083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124251011-8	44.9887194741517	0.995826611255575	0.32685496465095	3.04669262808666	0.00231374174987466	0.0696987590889924	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28437721836205	6.26346423925898
Merged-chr1-39754804-1	1.47506898210711	0	1.53565940125737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115015652-4	20.6962214714464	0	1.33881905677538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179829101-2	4.12407573706924	0	1.43551242317745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138192201-4	27.2664919141762	0	1.34028893088908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84408916-4	11.4699217893229	0	1.35333788964303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-9824-1	5.43905599341516	0	1.40971642478864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-55469-1	6.73668900073575	0	1.40413525341515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136151762-4	19.3323120981234	0	1.35230899635752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140733486-4	29.4763712485493	0	1.33623841058535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9191371-4	31.7767652018311	0	1.34155725620879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108765932-4	17.6241836304063	0	1.33842120990202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61120743-4	25.5356350477559	-2.31888947767993	0.997411345657146	-2.32490786050978	0.0200768875779871	0.321177025265392	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31776252764976	0.465515277017237
Merged-chr17-34965795-2	4.53577672280573	0	1.43109843618908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174204916-1	3.72747475298442	1.18912456487901	1.33317007204283	0.891952639663519	0.372418318014673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.51301315377886
Merged-chr2-157500572-4	26.5728515158489	0	1.33897881072987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160268041-4	25.8919932691249	0	1.33971363872511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6555730-4	27.9576073400097	0	1.34074813182718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45646066-1	7.7559332008873	3.84103635947528	1.09814453719224	3.49775118792298	0.000469198640639981	0.0205190417590899	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.28653589763239
Merged-chr14-61448113-1	1.93759056546163	0	1.55675929514368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136921138-4	27.7491664106488	0	1.34421848661096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117412839-4	25.89422490512	0	1.33578959297889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150203176-2	4.16270492164038	0	1.46585272902599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136936585-3	18.310423598149	0	1.33879203547016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160210735-4	28.6335514155991	0	1.33342530341813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180124875-1	4.93491221656627	-4.32627884952911	1.17000709686439	-3.69765180153479	0.000217603093360201	0.0111802330358858	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62238446349995	0.376242425970964
Merged-chr12-25209024-4	13.3326285762683	0	1.36333826930238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23874604-8	65.6669563768059	-0.339161151678086	0.205185898977935	-1.65294571102354	0.098341912902996	0.901174653319953	C57BL6J_F1_Control-BALBCJ_F1_Control	6.62568395558765	6.29781293454317
Merged-chr9-55255862-4	19.8480123112319	0	1.33766534243788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34386544-4	31.9694251143454	0	1.34147070254868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88407030-4	24.171206555166	0	1.33890962723995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125328225-1	2.49698702148731	1.77593347661071	1.32622068316338	1.33909348508624	0.180540241125629	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.12382511851675
Merged-chr16-36997835-4	19.9412162360996	0	1.34386122201674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49252288-4	15.6017649795223	0	1.33614858784873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153791585-4	15.2292458285706	0	1.34061665647131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55008386-4	38.8862943006087	0	1.33469966592103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99270551-4	41.8380801849933	0	1.33277495515497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88202172-4	18.1878045536209	0	1.34215042618493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57874338-4	21.4289215372519	0	1.33996660924562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38185564-4	15.6970500525695	0	1.3423851806934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64703053-4	40.1404807080843	0	1.34004761378996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21408572-8	95.8034977371336	-0.532121202679623	0.196207835119178	-2.71202830588497	0.00668728820601255	0.151023805397024	C57BL6J_F1_Control-BALBCJ_F1_Control	7.35200449499326	6.82448268043474
Merged-chr12-88446032-1	4.72064457450502	0	1.38655299281897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108478295-1	5.37447993478482	0	1.4261373619188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30590265-1	1.35557808173264	0	1.62372148978817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84317918-4	24.2562835567403	0	1.33897811472959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85250512-4	16.9056969715041	0	1.34616179174307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5726181-4	14.2180806415693	0	1.34452185646645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79036494-4	22.4085664428303	0	1.33686757921151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-127815008-4	29.5111645655444	0	1.33596693672062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5875655-4	20.3264748922068	0	1.34004558001583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47221450-7	47.151040702448	0	1.33470375585313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91046418-4	28.8415260616454	0	1.33878362996953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60991708-4	27.8113733462802	0	1.33697858539906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35050702-3	12.3033996124797	-0.225034831830871	0.70514953851583	-0.319130651782762	0.749627441169934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61981563456346	1.84197571055146
Merged-chr4-47333737-4	15.1096600416146	0	1.34308894094728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142608834-1	2.01564426428998	0	1.48158089924488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59735871-4	15.2662367123775	0	1.34031874923244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126438490-4	23.0414811713466	0	1.33930332317439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-61146299-4	15.034940980021	0	1.35555599520629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29385144-4	32.4672347038232	0	1.34236808645594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134518786-4	17.797583563028	0	1.34338796453329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51895670-2	2.39896826544916	0	1.6349661966156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76531012-4	25.5884740119873	0	1.34633104654319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58692059-4	28.588668123994	0	1.33714890847619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41377827-4	19.421122800825	0	1.34230108059078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101853991-2	5.02708210590503	0	1.55682525581712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5951070-4	21.7654739906983	0	1.34038605366181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21225176-4	36.5702230121776	-1.81770902781049	1.21750680769165	-1.49297647974289	0.135443343741814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr2-68981488-1	2.08059097002185	0	1.46671311887855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141781388-1	3.86891509268623	0.00081092537428455	1.06295444419916	0.000762897581086376	0.999391295857623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64538595732494	0.897114879832661
Merged-chr8-108694017-4	22.4057197599415	0	1.34039439986443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61592506-4	28.8621447479445	0	1.3341175773495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41235823-1	2.23984498693377	0	1.49023070687566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135720120-4	15.9631356928553	0	1.34146939502621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17880019-4	58.8763895930375	0	1.33919057397817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74278131-4	19.5883694836702	0	1.33645432205231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28053633-1	4.1574388584367	-0.0495687015081522	0.950830690642451	-0.0521319957338145	0.958423518711447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15554725514874	1.73556682010248
Merged-chr3-149086270-4	24.8977907490494	0	1.3357705648148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55918517-8	142.016608280809	0.473938746726593	0.154163191421948	3.07426657657477	0.00211020782706459	0.0650276571833355	C57BL6J_F1_Control-BALBCJ_F1_Control	7.60398231307027	8.05009888114425
Merged-chr10-59589571-4	11.8939818414697	0	1.33915738219538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91679223-4	19.6656653491899	0	1.34012323500609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65603907-2	2.64738285721038	0	1.48948524744719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25138376-9	133.626729057811	0.418647808459554	0.180694864589038	2.31687718083025	0.0205104231429361	0.326001781177446	C57BL6J_F1_Control-BALBCJ_F1_Control	7.40333819781255	7.83315975983195
Merged-chr10-66814580-4	26.722585636036	0	1.33651085143012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120128757-4	15.4803880536348	0	1.34390235686348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78400749-2	8.62377960500249	0	1.3735325344834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9159504-4	31.0978750637455	0	1.33954684093762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-93572229-1	1.72959291112626	0	1.68938984068494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72165862-4	15.8048745094663	0	1.34234562419633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95827635-4	45.4344050669938	0	1.3363647478789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18687086-4	24.6786571250319	0	1.34665259021601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65956124-4	29.2472928859321	0	1.34447501340864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52602273-4	19.8009522753625	0	1.35592407075389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55330796-2	3.79005573142844	0	2.06224012532684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151250949-4	35.0501941708472	0	1.33453564049737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24007131-8	94.8507063127719	-0.0294607920453599	0.198088754365698	-0.148725212290302	0.881770465958032	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.14556765915387	7.08558957128106
Merged-chr10-95152778-4	14.5418857770646	0	1.35595406734348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61416142-4	44.4042307785479	0	1.3383080801662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59980987-4	29.9111928324183	0	1.34152347915843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84023286-4	25.6697200495097	0	1.33726275270665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35482001-1	2.61517058767183	0	1.58245765347854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76610910-4	38.8450118813912	0	1.33200685689427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90044241-4	37.7453187087471	0	1.33795903209893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171786277-1	8.09696824306276	-0.215431476197688	0.584578821476098	-0.368524257607742	0.712482360946702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33387018775109	2.54548746396575
Merged-chr5-92525045-4	25.357675021733	0	1.34345941676449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-69993189-4	16.3000055645457	0	1.35354375215506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20077332-4	18.8994650440956	0	1.33741559136328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5180923-2	3.5231579034026	0	1.47801237606669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34389524-7	77.1122508675942	0	1.33531945780533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154904648-4	19.1728666618529	0	1.3454374659818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110697183-4	22.3458906717272	-1.61142833963056	1.03058053540062	-1.56361224016728	0.117908658601242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75485430327507	0.55634759613363
Merged-chr12-32128056-2	3.24177667617463	0	1.45006577245621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5692797-4	12.9237490148873	0	1.34708152268926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66490825-4	23.3364708941944	0	1.33796757424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60870999-4	13.0580289473495	0	1.35520232682221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19046215-2	6.75417714965719	0	1.75632932475477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107012395-4	17.3345933225611	0	1.34765059412614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57576397-4	55.5318177715336	0	1.33602890347403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34249746-4	30.6359565319827	0	1.33690305242561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119499602-2	3.54816085230766	0	1.45498363231142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31189543-4	16.5607940309696	0	1.33939871590218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150823211-4	18.9225191702621	0	1.33992094382385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36726574-8	97.5647448625248	-0.0429029879978827	0.174013472899483	-0.246549806075448	0.805256654351587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.79713350033117	6.76276577299439
Merged-chr17-44459177-4	31.8323169775197	0	1.34392327548157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-28374574-4	57.165007615811	0	1.3418874651239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132341931-4	32.0805511530046	0	1.33673964165615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88526389-4	13.1248681294473	0	1.34962324440931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11535605-4	44.4814875045947	0	1.3379131769313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51915716-4	35.0972231896634	0	1.33531120575065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10694084-4	31.1357457556397	0	1.3382233337365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119713593-1	3.3821903987803	0	1.44627864541012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64078531-4	18.6510083791105	0	1.34893052409966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144240161-1	3.88398432179052	0	1.46088852379454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179645885-4	13.0031634070821	0	1.34885908710603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9474597-4	19.5356058132065	0	1.34098828983417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117343177-4	21.2654955104598	0	1.33690112035936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35735488-4	52.3744366034703	-4.33876578316776	0.513664221005389	-8.44669651056394	2.99661392256205e-17	4.65408389190145e-14	C57BL6J_F1_Control-BALBCJ_F1_Control	6.49592170736452	1.55926189265627
Merged-chr11-34010971-4	61.136661844841	0	1.34339336422025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19927205-4	16.055869402924	0	1.34209543447213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99377673-4	25.7860303915387	0	1.33664149636124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-26559-1	6.88119208283375	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61585628-4	30.5567496402518	0	1.33821080898289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26442014-4	46.0786577203088	-0.00209168137472228	0.881457864603537	-0.00237297942274651	0.998106638132418	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36759862365701	1.49092140105159
Merged-chr4-154944371-10	122.098484670331	-0.326302796229697	0.243572858663153	-1.33965170840712	0.180358604472514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.84987569147439	6.5548339938403
Merged-chr2-21029843-4	22.0339054165011	0	1.33600221729154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-59185805-1	4.82091754567225	0	1.37612332607185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104425246-4	33.1700757273661	0	1.33715934563125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4113325-4	25.251272992123	0	1.33822590883647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36447152-3	19.2556857023609	0	1.33895506873507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55380188-4	29.1591240102443	0	1.33947632695135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5605625-4	14.8127726807696	0	1.34858868428476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31871027-4	14.1565134966803	0	1.34408104999805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10840743-1	1.92495052790025	0	1.46770848949091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-46109004-4	42.9172658590654	0	1.33462911279459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167331352-4	27.2288410722242	0	1.33640753272186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33358700-4	21.1604284567194	0	1.33757839039821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16233740-4	17.3581588085914	0	1.3408750248665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79352320-4	14.7080589152141	0	1.34469790901611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100431910-4	17.8374870215281	0	1.34075431022515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46795821-4	18.0264535152051	0	1.34610123637964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97584339-3	15.8930181661967	0	1.34280156724833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44631768-4	24.3781884194479	0	1.34138909689888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39957831-4	27.6712357014695	0	1.33868385986353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38171553-4	21.9040158828353	0	1.35273710715293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27182359-4	30.925486306259	0	1.34615269405213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98702626-1	2.26173173092853	0	1.54520468364752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28926665-2	9.99938024845451	0	1.60757633926567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79173522-7	240.602210654008	-0.0369496924735705	0.20698064824553	-0.178517618853619	0.85831648558815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.03318125585068	7.97754639324296
Merged-chr5-99983922-4	23.3744798717477	0	1.33748304577457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37642604-4	32.1867183602738	0	1.33594286922738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26453123-2	7.64687230234135	0	1.40626731459811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114908275-4	21.6888133732561	0	1.34533575325649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70057533-3	31.8962571474717	0	1.3443161347353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23913259-4	27.1718436326528	3.79742150115159	1.04072981577212	3.64880629304761	0.000263461658525571	0.013102938971447	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.86013993648448
Merged-chr8-13625659-2	7.75093608967017	0	1.44599776811875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92752006-4	17.121031270274	0	1.3453508329723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47377180-8	74.970742830224	0.682582719605074	0.263529167832113	2.5901600389067	0.00959313221478968	0.195381444010398	C57BL6J_F1_Control-BALBCJ_F1_Control	6.15571061807567	6.85929854110505
Merged-chr2-13500555-2	2.07248051839725	0	2.12598198353408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3029761-2	11.4443856859702	0	1.48120331737177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36262283-4	35.1350498051324	0	1.33907373715367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69919193-4	18.6717119588463	0.999933631810731	0.612180746425981	1.63339608056692	0.102385720836106	0.925438210663436	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38835823208704	2.7810225833363
Merged-chr5-52431672-4	23.8508990146786	0	1.33398053628847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95708844-4	48.6130615717747	0	1.34239278158201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61728211-4	18.1509826895433	0	1.34449984579937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130893216-4	30.7070016463971	0	1.34041483376308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50415480-3	16.5554519464146	0	1.33905738481852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84089811-4	11.9076604558806	0	1.34611229566741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44363632-4	27.9842460663014	0	1.34217304462343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30441969-4	25.120602918088	0	1.33807783678326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39231643-1	1.70681651127922	0	1.61974427218078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83650842-4	14.444137797645	0	1.34404045096654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30509488-2	5.30754693519054	0	1.44863851518067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75164054-4	17.3468392907849	0	1.33964702239589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40953832-4	18.1044742923023	0	1.34559441063683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54742606-1	5.58892731876182	1.82800868635405	1.33936256858616	1.36483483205276	0.172304968338077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr13-110944885-4	35.5409754245946	0	1.33556883510943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11017987-4	17.2955670096805	0	1.36857879963001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31126549-4	79.1777427235317	0	1.3374194463572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55361141-4	24.3162699162472	0	1.33733346000939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92637042-4	23.500800271868	0	1.33714106553798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138190923-1	3.87517438311973	0	1.3805583195843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32686047-4	17.4759091050417	0	1.3398031528041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35342811-1	2.95358001556916	0	1.44709786544323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165661902-4	73.1199455212412	0	1.33831841088941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40372494-4	23.8163323863125	0	1.34060179040576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91082115-9	147.401569300583	-0.23912532300502	0.238393824598141	-1.00306844528423	0.31582783824282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.46906280214805	7.22760237188254
Merged-chr11-3183969-3	13.0248417586696	0	1.36334272580668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122754094-4	24.9673612724892	0	1.33520513551559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184471557-4	15.2124277126013	0	1.34697888479111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32396414-4	19.8546578573356	0	1.33627596971294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68157354-2	9.33462905845147	0	1.45562794447641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131083789-3	9.75028118466886	0	1.37659378623142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113592018-4	39.6265160247615	0	1.33601038217506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123058889-4	18.2517891146346	0	1.34369590037769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130648287-4	23.4767704256503	0	1.35643268996896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-29550319-1	1.3312486990447	0	1.70947348779176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191817973-4	16.1499634361542	0	1.34935263592431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64342325-8	71.9708498410764	0.557683797090902	0.197012938539814	2.83069630463992	0.00464467993721415	0.11683487122028	C57BL6J_F1_Control-BALBCJ_F1_Control	6.40268716906997	6.96930134585677
Merged-chr11-83560604-4	10.3189368152885	0	1.34591946032871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36632313-3	39.2726480928331	0	1.33736640481542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97232535-4	30.272489448624	0	1.34380212646516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29264567-4	35.4718690781064	0	1.33571473998466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152806218-4	50.8274368868364	0	1.33563114234578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116942545-4	25.0008329719398	0	1.34523680496628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172400104-4	38.0579406826863	0	1.34259089349034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140817027-4	22.9531305767998	0	1.3396625371953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49764218-4	17.022132427033	0	1.34385114507839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65991367-4	42.0966674449091	0	1.34907765442528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68844647-2	3.79605305169992	0	1.45465622459816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86191664-4	42.6509765900471	0	1.34053617143199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77910137-4	18.9958156857413	0	1.35316387266623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29786779-1	8.99942086701537	0	1.35516306389015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143021947-4	24.2521700523744	0	1.33870341542901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73056283-4	12.6839840322749	0	1.348450396632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35496118-4	16.7655526130595	0	1.33831251111755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90445603-4	9.81142696556025	0	1.3458391398858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-26812075-1	2.78014069890317	0	1.46423855173421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53783467-4	21.0213961332724	0	1.34232964195798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124705100-4	28.4736839087393	0	1.34440703690744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74494594-4	11.8283338079793	0	1.35057420716383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63177439-4	12.3877850537414	0	1.33872130182279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73233594-4	28.865077425772	0	1.33698557483853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33642000-4	16.1473842488158	0	1.34473333512302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9806655-2	7.40416440938306	0	1.37604892365235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133830583-8	58.9176583311709	0.240060798054082	0.231826066637344	1.03552116263794	0.300425588491166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29435811645346	6.51241307256616
Merged-chr5-31936093-4	38.0606284849253	0.33242983474957	0.644239885070545	0.516003188335924	0.605852182389168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48475512893435	3.1363891054715
Merged-chr5-100637020-4	15.6410627265816	0	1.35512169240171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69222528-4	30.6237696820607	0	1.33686937546393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38731110-4	13.2050710999965	0	1.35434757616342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127594718-4	45.8520451293687	0	1.33906636466934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4475232-4	32.7875622346251	0	1.34108991451801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70601552-2	9.58324789245312	0	1.37406728831575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86888728-5	32.2782916456679	0	1.33671855368421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84524196-4	28.3204198512286	0	1.33298403674734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92216871-4	34.5023447219294	0	1.34416277238978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12208316-1	1.8778169337515	0	1.50439239811145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70287512-4	15.1803447784219	0	1.34400730574474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58742647-4	38.2487276947798	0	1.34085845311448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139384795-4	33.0208022882122	0	1.33687950260525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-21522661-4	23.270486737905	0	1.33995079825797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46406136-8	93.2560512390769	0.10000205408007	0.206562537035635	0.484124834615185	0.62829727724023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89512665262609	5.98185270454584
Merged-chr16-55555368-4	25.5688008955109	0	1.35442392740367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37559849-4	15.8974299314046	0	1.35820546369467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167588965-4	39.22115585803	0	1.33826320995788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-49894961-2	11.7560886013144	5.04281957782033	1.03020151516503	4.89498365473916	9.8313899549704e-07	0.000125746947426408	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.91172194284034
Merged-chr10-99425461-4	27.6878441492434	0	1.33747253015941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136137246-4	44.5295086369472	0	1.3390406489808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34823563-4	16.2584671932485	0	1.34328974058146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24791547-4	54.2916022782239	0	1.33811706742393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117358052-4	29.6508757296848	0	1.36998236519334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80083339-4	10.1980698543895	0	1.35007050468076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60927479-4	18.8483246056039	0	1.34335010778857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3359309-4	15.3743469764745	0	1.3413968132703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115500574-4	36.2847137611545	0	1.34083255892037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57873264-1	4.0320946067081	-1.89333286172593	1.13765208795697	-1.66424593403247	0.0960632920453902	0.887536761656984	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	0.97908007631626
Merged-chr6-140750610-4	21.5341933567714	0	1.35234941232617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17024600-2	6.59283055694663	0	1.44892556943925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61108665-4	57.43014944807	0	1.34019748115042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72351512-4	13.8588459382705	0	1.33867847747506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118083214-8	214.998196102862	-0.389084825529886	0.180085782025857	-2.16055271633837	0.0307299072777583	0.429559968816266	C57BL6J_F1_Control-BALBCJ_F1_Control	8.62706759687896	8.24392229862883
Merged-chr1-37639308-4	8.9032668245675	0	1.34663078498657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9492311-5	42.5540852827841	0	1.33434817696448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167944939-1	2.00677135654856	0	1.61821280691717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31002831-4	25.459937826109	0	1.33603902942565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101751947-1	2.26121213144502	0	1.45158770544309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52703416-2	4.93548332015216	0	1.4660934895726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33587764-1	2.50840734510823	0	1.53681090357354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120744098-2	11.3348060154964	0	1.35763856416759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64795996-4	45.9194752220204	0	1.33680714186758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63824478-2	4.61671069616487	0	1.4801966445867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57745626-4	18.0142850026155	0	1.33579436899829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111046407-4	25.290950523728	0	1.34032223260149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137947025-4	20.2255722162004	0	1.34298524123013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91851846-7	48.9406086601598	-1.31839172747206	1.28965967909244	-1.02227878319018	0.306648972113537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr10-130542210-6	45.0388710634124	0	1.34690869260674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12856118-1	3.06659493681302	-4.87412197737042	1.17015415897233	-4.16536739197769	3.1085156735541e-05	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62396845196869	0
Merged-chr10-44327319-4	25.1035029034559	0	1.33767897244568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24164714-4	46.0219183760664	0	1.33987989454345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16883717-4	17.9066809841987	0	1.34123480150004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37228090-4	28.3189145356448	0	1.3458783637838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23007761-4	27.8001125406388	0	1.34155936440332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73138731-4	33.2682453064763	0	1.33533563076244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99211687-4	34.1295351178263	0	1.33647679899052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36065058-4	30.1418851454893	0	1.35168302206993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6646575-1	2.18404640173176	0	1.55267055712292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95702391-2	4.52879633994022	0	1.40086385030792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83541165-4	21.1210019751877	0	1.35749664568904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135942362-4	28.0449280811826	0	1.34050370062316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34484575-4	15.5579767273921	0	1.34127723084476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75757524-4	17.9258088594093	-0.847828650750206	1.18127403927482	-0.717723934126819	0.47292752273803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69486619385668	0.887876939341704
Merged-chr16-13373143-4	10.8933061000203	0	1.34369624849115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19002162-1	4.33508328409762	0	1.49682523226442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129229360-2	3.69757929062598	0	1.45089846647851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121842821-4	20.278310778745	0	1.34751876408194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64914768-4	13.0846721081218	0	1.35470622079867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53104641-2	3.0635082244904	0	1.44038366263461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165736269-4	21.8739271464934	0	1.33705025538958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81446323-4	20.3140981480888	0	1.34423823073511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38085025-8	204.292560171458	-0.186218107909367	0.20390190210389	-0.913273029765494	0.361098963270736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.89541504924291	7.71033891343491
Merged-chr5-99248746-4	32.8693021160167	0	1.33739358200744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5615020-4	48.786561855074	0	1.33953334973772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12036794-4	15.946404037949	0	1.34755332108353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88059325-2	3.35841132097651	0	1.42427482467431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95451079-3	26.0090486646869	0	1.33824949288499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54811792-4	13.1627008640445	0	1.34679332828571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126919241-4	16.0493524378317	0	1.35231486725861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30676578-4	36.1310692340085	0	1.34020320217144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78895965-4	23.2851262035587	0	1.34332662955971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156660853-1	2.42269122913602	0	1.52726699134387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160171285-4	25.7448767039536	0	1.34330972867446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32146439-4	16.6697985174198	0	1.34315222946142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-16380343-4	14.6244460092812	3.40449556577027	1.06188158362115	3.20609719415276	0.00134548533753025	0.0455980283433959	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.37047170583132
Merged-chr18-46405246-2	17.0287966872442	0	1.33948274508137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134764470-4	17.0760491955392	0	1.33883962617871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59419406-8	71.0730053054404	-0.601991928504725	0.273671200594173	-2.19969045773808	0.0278288642776711	0.403507397511316	C57BL6J_F1_Control-BALBCJ_F1_Control	6.49017668244006	5.84601340638875
Merged-chr5-65832396-4	40.2081518223686	0	1.33854410393688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69538060-6	43.5673662212626	0	1.34978376413466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39619960-4	22.2967695317772	0	1.33517956466503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5845831-4	25.6579144502474	0	1.33527126271688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16990349-2	3.21534068050417	0	1.44058349479735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112633161-4	29.6403751865751	0	1.33733195435869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70021598-4	33.3580411556584	0	1.34219274206243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63541224-4	20.2639804709041	0	1.33530700472674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41466841-4	22.4279516038851	0	1.33588531567147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21567903-2	6.93947997481249	-1.34577406676492	1.14225811837675	-1.17816984192451	0.238728902940784	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.601513806634888
Merged-chr8-120319630-4	17.669690585478	0	1.34244306009353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34193027-4	26.0675983616729	0	1.34794857863693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73533643-4	12.2439845155775	0	1.34418772397675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118655162-4	28.422495042633	-1.11978309331772	0.787109044361626	-1.42265306356111	0.154836753269228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86719832675847	0.788686275880602
Merged-chr5-43187494-4	34.7356270866592	0	1.34104958866002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73769938-4	38.6889497549242	0.16182042833376	0.516971095391328	0.313016394487719	0.754268206594387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54473282581218	3.60690469350143
Merged-chr8-122564747-8	41.719528957733	0	1.33351740067162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100602444-4	20.0598832404729	0	1.34645917051165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40318309-4	8.30537794534991	0	1.36053963180937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17876852-4	32.1395748995164	0	1.34271040836731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108937081-4	45.7035984821384	0	1.3374221942116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35106772-1	4.29203083540377	0	1.38338268119849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127266216-4	27.1761740120425	0	1.33460884829586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96122755-2	3.53643035643703	0	1.42323367398484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94632106-4	15.5527587175871	0	1.33923750797533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38395294-4	23.9375175735992	0	1.33729766097131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129233013-4	61.63582477929	0	1.34019914594101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48196562-4	27.2059547205201	0	1.34079053405903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115516258-8	122.03432205866	-0.306294788694815	0.167958639642274	-1.82363223081097	0.0682076905002638	0.721459945242374	C57BL6J_F1_Control-BALBCJ_F1_Control	7.60694496703915	7.3130495620135
Merged-chr8-126551192-4	52.8871900352547	0	1.33716098629645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21412281-4	30.0570845039074	0	1.33492379848378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16434797-4	19.4999691453784	0	1.35400063671097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45339513-4	55.2494386637104	0	1.35107800122062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146616058-2	18.509416649728	-0.198134236567708	0.573540623335461	-0.345458069587897	0.729750027747441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13000510991743	2.41551551029609
Merged-chr10-68735937-4	50.9631207052904	0	1.33978757807649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95708350-4	59.4882359941796	0	1.33732670857952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114667625-4	31.2884636535478	0	1.33883964012411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173412125-8	145.738711267343	0.43919818743762	0.13377375349607	3.28314169229409	0.00102657053404535	0.0366163698557554	C57BL6J_F1_Control-BALBCJ_F1_Control	7.40887886843395	7.85344292021959
Merged-chr12-77060200-4	20.3871127104955	0	1.34336416988506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73433773-4	20.3459567457511	0	1.33807527405289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5269333-4	22.2793469026324	0	1.33776016769972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87033713-1	1.97139145799134	0	1.54439248782859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139287298-4	26.34974954354	0	1.33826575201681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84751600-4	18.7787298979578	0	1.34431551303704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27258599-4	21.2086445494411	0	1.34191016916334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128980494-4	21.3616517775061	0	1.33796404759245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136657697-1	2.18448062806545	0	1.45715584697821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64202775-1	2.02641893308867	0	1.56347886767138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55793617-4	17.4793935061045	0	1.34603844125257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83005051-8	103.593040797921	0.0235767258592058	0.194342012417165	0.121315641255156	0.903441031590748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56819909067819	6.5959110213357
Merged-chr4-120879653-4	34.7489478165343	0	1.34219239487677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66872731-4	27.8547590605457	0	1.33636397895993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52188804-4	14.0540057315955	0	1.34159485174593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157933829-1	3.22711601082386	0	1.38415058473694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44206326-2	11.2270562869401	-0.292252089690953	1.00853578952288	-0.289778600548438	0.771985620070794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.13743241080208
Merged-chr4-132600679-4	28.1952360663361	0	1.33879661519455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39491608-4	22.362461744559	0	1.34377040291867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11321274-4	17.9906166725291	-0.843262039698327	0.812305857040381	-1.03810902308489	0.29921930112304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.18909650862134
Merged-chr13-119631912-4	19.0125842418233	0	1.33930772105775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103692327-4	39.7548601492958	0	1.33573729401927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64876475-4	27.7204327336661	0	1.33418673043467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76587501-4	43.9092023583615	0	1.3347004432899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-16141-3	225.405433956709	0	1.41119554400108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65138288-1	3.58264796667792	0	1.41066877066851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12364240-2	6.56271637214649	0	1.4496722246011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143114691-4	24.9365501683617	0	1.33939720357749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-98666868-3	70.6972704754496	0	1.40626323907613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111449482-4	16.275054202924	0	1.33846630414883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68032618-2	4.55185581557781	0	1.4196916477864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-22028836-4	15.7980450832763	0	1.33934729198392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59055062-1	2.10797900614618	0	1.65662620555581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89462012-4	13.4653226352525	0	1.33895447843863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75855594-4	44.3718254042064	0	1.33825530524545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55097887-2	8.6429067999856	0	1.36620050572126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-7632-1	4.01441363966969	0	1.71636368600012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101134524-4	28.1938427556447	0.113858151397586	0.490717897872453	0.232023636984154	0.816519655047977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23984995384639	3.38488482208973
Merged-chr15-59752460-4	14.9563501303514	0	1.34943642123097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-54122005-4	18.8042211998949	0	1.35254845197732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22095945-4	15.6739432903611	0	1.3398629436981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178369048-4	36.875845351978	0	1.33703513033807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84272723-1	9.20677670943498	0	1.34743612978889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55735977-4	25.7484760766352	0	1.3475441445101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116989492-4	29.0959597284691	0	1.33678194770908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131184530-4	15.7138202398502	0	1.33812384641338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120112638-4	45.0032897217385	0	1.33575693847405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6461592-4	18.3968321512173	0	1.34772755648981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67610908-4	17.3447027470477	-0.767658063920967	0.754729310428161	-1.01713031853165	0.30909143900939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21307952544685	1.38572824442771
Merged-chr10-96094157-2	3.93405382936184	0	1.53045919894579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35567479-8	113.795879120399	-1.35420899060418	0.204037283996409	-6.63706634434524	3.19987648293399e-11	1.3696227223292e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	7.2584286011323	5.92284622876951
Merged-chr13-55895754-4	38.9068308122922	0	1.33666029718655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156028595-8	71.6705073306127	0.326119733767726	0.203911089377147	1.59932318915989	0.109748809559335	0.964275773779112	C57BL6J_F1_Control-BALBCJ_F1_Control	5.88187138252659	6.21597508704135
Merged-chr1-130918445-1	1.88343397657673	0	1.54146330217883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39784073-4	45.9578804728035	0	1.3377495088734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81112353-1	4.10037464422182	-0.740264765857174	0.939704226404329	-0.787763580344543	0.43083500767865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23943310347417	2.28242002473277
Merged-chr15-96638286-4	81.3495239591545	0	1.33824813918391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107708423-4	22.3125540285747	0	1.34324223863613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36465210-4	30.8259476523902	0	1.3375367006723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26605842-8	159.633405444375	-0.104858840032082	0.172295299717883	-0.608599539301296	0.542789909921252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.25877163834986	7.16619769304737
Merged-chr19-60165485-1	5.03340339798949	-1.73781714494501	1.14145374309966	-1.52245954376206	0.127893974962621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36044541526662	1.67575558916111
Merged-chr1-184022571-1	2.37752642707309	0	1.53871796375159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43354620-4	36.7542251435174	0	1.34021744839735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8240839-4	33.5435947999933	0	1.34034187077789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73475832-4	24.0874056265355	0	1.33758856059599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34783268-1	3.00414175011328	0	1.71590304800908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3133585-3	21.5322620696927	0	1.35486461664229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129788911-4	19.3355157737008	0.256963110504832	0.931983520081846	0.2757163672618	0.782765923476529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.18984215491549
Merged-chr15-66950357-4	13.5780533579347	0	1.34946799220383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-98996161-4	18.5747592753599	0.153164186640585	0.730177479920559	0.209762956065488	0.833852686578401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	1.34883400838639
Merged-chr16-33347350-4	14.5419718248226	0	1.34336802077123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8772598-4	29.9411141156636	0.354028758793001	0.793943215042138	0.445911939400114	0.655660857504124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.30349892390813
Merged-chr1-180261152-4	49.4417592730849	0	1.33480954685286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59051277-4	25.5232242571613	0	1.34018046086669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84355444-4	17.919537220901	0	1.33851326542752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87831766-1	3.29879906000629	0	1.43107472925952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115045321-1	1.62060029000143	0	1.59458643789142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57571808-4	23.6271076746987	0	1.33878313428709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99641124-4	13.2342917576135	0	1.36004943051549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107624740-8	72.9223443640764	0.690001811042348	0.288297219233449	2.39336963733812	0.0166944127495963	0.286185737055384	C57BL6J_F1_Control-BALBCJ_F1_Control	5.7091872692259	6.29695347209428
Merged-chr16-24822673-2	5.079575031917	0	1.42490376577071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9531863-4	16.3715008299831	0	1.33912506435987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46686924-4	19.9977677294198	0	1.34435556255665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38473722-4	19.4871709360987	0	1.33764758404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117304571-1	5.13959326830975	0	1.37598906595177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-44383199-1	2.75507617938478	0	1.55744007582838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32405498-4	13.588401459659	0	1.34574284729031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11026456-4	22.8696489869753	0	1.33846984243895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98688851-1	2.95450854127429	0	1.43134608605788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155404824-8	67.4998063881755	-0.247691619928663	0.187009635347867	-1.32448587190665	0.185341732129112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78234866300542	6.53232318698856
Merged-chr5-140379415-4	18.4215057888497	0	1.34161953923103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30270327-4	31.848901948625	0	1.33801892436462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-145178705-4	23.3532531135516	0	1.3378487061538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27411940-4	18.6123526763152	0	1.34349503048532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48424811-4	22.5944930444712	0	1.33505646039364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158136029-1	5.87019725368424	0	1.36499703081885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-35128134-2	8.49034049754844	0	1.51183998233336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135468540-4	49.3069731011097	0	1.33837274686061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52802545-1	1.86625688123508	0	1.62175060071956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96377730-4	28.0704089720681	0	1.33996960658213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18195315-2	2.85357252783637	0	1.97779750432197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125118140-4	26.1080558411617	0	1.33642753576979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56104456-4	27.7802087071432	0	1.34512702640183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113918882-2	3.53113520156449	0	1.48318849694112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72552824-4	60.2843163452104	0	1.33720034094105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84057270-4	53.2683534852729	0	1.33648158813425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94296120-4	16.22234927123	0	1.34663854379982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86202869-4	37.5516343613574	0	1.33663223501344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4488575-4	26.7080471343585	0	1.35028712672588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119065634-8	89.0057850243302	0.192524353864102	0.236630966090871	0.813605915762388	0.415870747815785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98939975118692	6.1755367960286
Merged-chr16-55790545-4	16.1887441623932	0	1.34977407871634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99179087-4	19.5212290053747	0	1.34153281274162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45251806-2	10.0527280446765	0	1.37689017757931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83659022-4	17.6119342964679	0	1.33896881180271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6451405-4	11.7015426706359	0	1.35063009579179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54441515-1	5.47738580958546	1.34598403405611	0.872289144616712	1.54304801608822	0.122819126186173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42139546294927	3.51667543379017
Merged-chr16-55757770-1	6.45692780936862	0	1.40766813894393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77964218-4	34.981823869	0	1.34145567451043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84380526-2	4.45036795856702	0	1.39458194440715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54691405-4	34.0816042541773	0	1.33542997310257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60848682-4	15.6187699368657	0	1.34128653431446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144330514-4	36.6662736291513	0	1.33917314675701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17891738-2	5.10970396861911	0	1.41537583872285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102365254-4	28.467088921625	0	1.33524745727203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6104692-4	11.4107366280624	0	1.34441857443488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84882048-2	3.8800249139356	0	1.43210053188375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3105547-3	49.2991294636707	0	1.33828531915218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50760135-4	23.4744279291334	0	1.34082241596587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180231860-4	20.8502193500403	0	1.34188291014691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135439427-4	29.4649342118709	0	1.33488969247394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63831235-4	13.342564260684	-0.223930467502865	0.781143303765802	-0.286670149284161	0.774364896093916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9069419865589	1.70340695421451
Merged-chr2-132266331-4	32.3385255890388	0	1.33874706926358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54954254-4	27.0978167747408	0	1.39107355811683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116376215-4	25.2761362561017	0	1.33994722695915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191990201-4	22.4878066601156	0	1.33843758715706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117304138-4	28.2079313781498	0	1.33718291492927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84982096-4	19.4446506101239	0	1.33576311686393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144904133-4	34.1003262108509	0	1.33613300093599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59237835-4	28.9072862553975	0	1.35597630361705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89028073-7	56.8784119873604	-0.171058617594577	0.24601792865777	-0.695309559461145	0.48686132472267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.43711825078826	6.24020844926467
Merged-chr13-60876738-4	17.1076117164279	0	1.33825902729289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135070017-4	25.6232477226741	0	1.34170076764606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139366353-1	8.00522561136287	0	1.37692180359431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101027343-1	2.38291872886929	0	1.70180870591804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126740336-2	4.69058711832177	0	1.38845421413199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94969159-1	2.74149259635998	0	1.4479720064445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60795312-4	17.3800898108673	0	1.34173390343874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39490810-4	54.0650932363144	0	1.33401030179249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77868107-4	12.6533719399414	0	1.3406489829801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69222138-4	11.4555465701767	0	1.34885072596283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19838396-1	3.35175023946188	0	1.45496266670723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136485967-1	6.1022071502828	0	1.35913502971555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90235433-4	18.6004675485468	0	1.33795451785749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108997206-2	6.95666109663081	0	1.38513334912719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68474741-4	24.308877085164	0	1.35970106587098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90559130-4	19.4526389396933	0	1.34086867905043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93599934-4	33.0399906104029	0	1.33748112832888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129434431-4	48.082825427727	0	1.335283133622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90115691-2	4.78330655301284	0	1.46512657709803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94187518-4	14.228557148786	0	1.34242277998789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34850308-4	10.556312109844	0	1.34648593245053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55464996-2	2.15646892454393	0	1.51134695811641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85395671-4	33.070177707941	0	1.34098133213013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51938901-4	19.1498128151364	0	1.33835192613014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180250245-4	17.5262659028231	0	1.33677988846643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160225661-4	37.7198727639135	0	1.33392664212966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72538909-4	25.8687163535468	0	1.33922143858135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-93511032-4	15.5094299115134	1.12995405578656	1.12321470761032	1.0060000533563	0.314415544396165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.44075340970692
Merged-chr2-153170627-4	27.1087309798008	0	1.33712044167645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33009956-8	70.9871156987006	-0.352857801630498	0.242914151807499	-1.45260290108633	0.146334040119288	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8651184850561	5.55622245684477
Merged-chr5-65724505-4	24.1595924836117	0	1.33749424676074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-42512505-1	2.20464413483435	0	1.84903152701437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17182339-4	14.0686172663739	0	1.34015882183136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191119477-8	67.459775850271	-1.27340075974928	0.264566745120108	-4.81315502888006	1.48565948860444e-06	0.000177304591009058	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41215891787948	5.13158352054485
Merged-chr17-48418432-4	14.1758032116164	0	1.34231689138707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-26441699-4	16.6084067584286	0	1.34134128562208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80553848-4	15.6098806546888	0	1.34353060389862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123952224-4	15.3618335575898	-2.01742868625783	0.879576472465231	-2.29363648234415	0.0218113880075381	0.341094718268631	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23349578644154	0.878778741524029
Merged-chr5-64810094-4	17.5627221248345	0	1.34384283445939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74115686-4	15.8391844974443	0	1.34514141798165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135713641-4	41.6575453750542	0	1.33338530707475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51326978-4	25.0565552037831	0	1.33745273379292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137880397-4	18.5050391142722	0	1.3510484459867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120108039-4	16.9493948742482	0	1.34837952235418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73770731-4	32.9511620036747	0	1.33846216182833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71668307-4	24.355719467995	0	1.34518461979394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150914528-4	52.0243863074371	0	1.34005447813421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109413783-4	30.8996887913708	0	1.34345104268306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21332351-4	18.1338113988577	0	1.33972224184766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67690210-4	19.2550008306157	0	1.33958803850853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63078516-4	38.6113135905924	0	1.33772233998451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21814032-4	13.6018424480073	-2.35187034488698	1.02580720498275	-2.29270211153032	0.0218651608991315	0.341739565765344	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43913759844939	0.55634759613363
Merged-chr3-79552341-2	5.19187713872175	0	1.49291173540551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-4319581-4	28.4725443371761	0	1.34153070945232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140790574-4	26.8221587975116	0	1.33805199792587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-53607272-4	17.7664419002295	0	1.33966333409019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80454201-4	12.5522726404748	0	1.34621713398798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117352472-4	25.3114550951532	0	1.3384478861301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108639310-4	65.2044181615569	0	1.33493816657819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33756151-4	30.512053998312	0	1.33846631083022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57541622-4	20.6782180094742	0	1.33660779549411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34291763-8	94.9245663832675	-0.0864180106251026	0.252340837910773	-0.342465418362681	0.732000664482623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.2693225139945	7.15471199011604
Merged-chr15-34043895-2	4.5739191104943	-2.23103703332747	1.33284822235915	-1.67388679063435	0.0941528507385776	0.876679481551617	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr12-95292815-1	5.50516729927163	0	1.3762495053997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65630777-4	12.4878298999989	0	1.34644689997647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11480204-4	14.6964854149897	0	1.34130200483827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110994833-4	15.4549867998689	0	1.34360679216245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73779409-4	67.4158857092661	0	1.33837504255271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100152813-4	33.6166318467138	0	1.33766385011492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89742571-4	12.6482860966888	0	1.3400441373686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122853811-4	22.0450611786584	0	1.33728601947928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8912416-4	49.4114564767911	0	1.33690163910449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90177661-4	13.3245653015429	0	1.34376126620942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47214307-4	11.923413716357	0	1.34530246322077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-150478243-4	24.4302914311285	0	1.33947944555285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74381678-4	80.6205606682192	0	1.33929015274797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145103980-2	6.83288803599346	0	1.44454122856433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31468021-4	26.5090346825518	0	1.33843790339075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107341552-4	15.3819193860268	0	1.34521840863169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10857575-2	3.75665964061103	0	1.6387796784736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62756972-4	18.1965541629328	0	1.33538183745662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-129770857-2	3.86218083921233	0	1.40904793969518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38863588-4	17.8859611954977	0	1.34133477731015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167589486-4	53.5615541729699	0	1.34387495773413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31385055-4	29.4255282245769	0	1.33508353196361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133497971-4	15.8669716790221	0	1.34186531414404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24624564-4	32.378748725471	0	1.33769977016553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114194462-4	10.418273620307	0	1.34097036033777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5818109-4	33.2250753332488	0	1.34165039068114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42528367-4	36.3051036748222	0	1.33669435445864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81021585-4	28.5868533288589	0	1.33703616421406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65990269-4	16.2381041920524	0	1.34751212149802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107323442-4	20.7607775368894	0	1.34611103306011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39652376-1	3.37950025531136	0	1.40627123349628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116054525-7	117.687850193262	-0.263020826040995	0.202291258053809	-1.30020856349132	0.193529496397754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.92769669178271	6.67528306544609
Merged-chr11-82023938-4	19.3241162534487	0	1.34340179690159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121461562-9	114.515065458373	-0.667022579712373	0.173487554253256	-3.84478634553034	0.000120657518553712	0.00688228966533185	C57BL6J_F1_Control-BALBCJ_F1_Control	7.23843794128742	6.5781483221374
Merged-chr2-158130834-4	18.8993524632895	0	1.34730271499728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142071052-4	20.4496614930891	0	1.36365385793678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80846091-4	30.9954583573496	0	1.34007443019337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22474816-4	20.3735274463063	0	1.33907697102129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107318704-4	31.5891255175755	0	1.33936051679087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58824819-2	4.46702869030137	0	1.41243314339997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17788689-8	64.1506917950803	-0.184178425483585	0.302173492866014	-0.609512183668774	0.54218499949687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.17111921199162	6.01377846777186
Merged-chr17-67474170-4	24.6187985338715	0	1.33721371162156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119424991-4	24.7086681755872	0	1.33956655684161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44608178-2	6.20557138019566	0	1.42713621715136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49905381-4	25.7076736563345	0	1.33867920503218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58552185-4	29.2357203969046	0	1.3392903241357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35294924-8	66.8993717103625	-0.0496943254497791	0.250990488501467	-0.197992863181701	0.843050647557647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5265943982725	5.48216673982805
Merged-chr15-79883481-8	51.9542492097352	0.183759114993491	0.251746069839314	0.729938366508688	0.465427859217943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9332285017299	6.18696906965412
Merged-chr14-121873371-4	15.9070648279935	0	1.35073274229767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65674770-4	21.8067457917518	0	1.33500633128841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95279678-4	23.4622191327699	0	1.33661177337928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149193749-3	58.5151034410714	0	1.34061292704259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77540843-4	13.4130000325509	0	1.35196022541295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5416240-4	22.5075605465055	0	1.33819936997753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170934596-4	23.2481404979377	0	1.33608060670326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53505714-4	22.3422122135453	0	1.34557179733631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21718987-4	23.9721175378374	0	1.34866870034854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31593235-4	11.8423770679633	0	1.34622149614672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100925187-4	13.2395314392639	0	1.34608892721747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73222763-3	42.8742374317569	0	1.3361393833872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95900074-4	15.5968307129517	0	1.33834339276867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5828871-2	8.01460939127131	0	1.41303842901463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108248453-6	18.7181840888898	-0.632141938572167	1.30210908038946	-0.485475409159341	0.627339152116001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.303163067301871
Merged-chr18-5740518-8	95.5714374405294	-0.0619051748902677	0.315670815101873	-0.196106741354248	0.84452661987438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69638142522932	5.63350706132025
Merged-chr17-45613163-4	30.2410021311301	0	1.34767404027203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17510334-2	11.6107512709621	-0.203791216608856	0.889993096730843	-0.22898067115063	0.818883939227163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51789747318134	1.49092140105159
Merged-chr8-66334449-4	19.84539350093	0	1.33954180237297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30593372-4	51.1282537229477	0	1.33613653973906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39526993-4	28.2068572825046	0	1.3359406417457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70224797-4	13.7726873381596	0	1.34210409442705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118818167-4	55.0610983791574	0	1.34151612674855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22811581-2	4.21871975804181	0	1.4489500751624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50870322-4	30.5668108688103	0	1.33305776827206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99033700-4	32.1580227851743	0	1.33874457089603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46719768-1	2.07504138579633	0	1.45817985984933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37893445-1	2.14258021411346	1.86665645941838	1.38085306838891	1.35181396352059	0.176434836044836	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr12-32306577-4	23.5716094719551	0	1.34170107119167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120978448-4	13.6555363568278	0	1.33961636531691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71027081-4	21.4894843612912	0	1.33947738221191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94292364-2	13.4720419495839	1.73873634735896	0.748526008543133	2.32288033750903	0.0201855816915605	0.322425652744196	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29451429493117	3.21755497992111
Merged-chr5-99382970-4	34.033712307869	0	1.33431441296409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97397170-3	14.1720761150889	0	1.34235502695781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25358110-4	14.7840289794991	0	1.34386173618166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87650704-4	29.8113383189135	0	1.33787934151757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33969435-4	22.3484693252917	0	1.34041236428963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19965457-4	27.3750411881827	0	1.39188386787503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92467205-4	16.5583486793622	0	1.34377079644777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50092976-4	12.172854929845	0	1.35599616309882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140505979-4	22.1068340922827	0	1.35705894789192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152914661-4	14.0092055795046	0	1.34335625580977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146657665-4	66.1529576483517	0	1.33903998762827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27562340-2	4.9012305207399	0	1.42157766275322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20809887-4	34.2331604792212	0	1.3371152247967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30897945-1	2.13703003511371	0	1.45388120182578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54156094-4	18.3359925534597	0	1.33718162769558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59653862-1	3.6865183639021	0	1.39897385366522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3355199-4	16.515978714219	0	1.34617295772472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80150259-2	7.36775880938784	0	1.40252360956939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137825242-4	18.3456034621949	0	1.34021582719515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79209272-4	17.234476936429	0	1.33727048596664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3198794-7	61.9048727848215	0	1.33647781616658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113766510-4	51.1785514335604	0	1.35193834828296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75792562-4	31.9303218457238	0	1.33560563151957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-100548131-4	19.2095042517417	0	1.33767517854422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32799784-1	5.00212183964071	1.79907900213746	1.30964537151643	1.3737146263147	0.169530294324088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr2-90504198-4	13.5162466001745	0	1.3562990381805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58197073-4	20.1669738577959	0	1.34222288471377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135686680-4	18.7447919878898	-0.152206103180109	0.584742629619868	-0.260295889969671	0.794635542698157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77720628303105	2.28242002473277
Merged-chr4-141929014-2	6.70929346527029	0	1.39669451158814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157457660-4	20.1851305795043	0	1.3465138756341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108918983-4	26.87098489902	0	1.34262124954249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70257669-4	17.1638393499988	0	1.33707012901661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16910124-4	23.3283668451769	0	1.34798726167484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-75124964-8	65.7970682534535	0	1.33378090108942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67108683-4	42.2023107736224	0	1.33657651094147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6824667-2	7.5761361625997	0	1.42049466458947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31394130-4	21.509764461597	0	1.36272688271288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6582953-2	7.50309269579077	0	1.36618223725844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3395085-2	3.81450218625768	0	1.60789173876102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82526104-5	59.6005436838041	0	1.336852906176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55410841-2	4.07733772859192	0	1.94056937604318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141022279-4	25.414292484251	0	1.33625423596053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88516156-2	5.32810238488175	0	1.43516988508872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106674819-4	20.5075537750688	0	1.34882151795255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-29482-1	2.73589942971469	0	1.9992253234088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115142151-4	16.3987845179888	0	1.34393475164637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3145814-3	26.5804622283236	0	1.34463936140089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50570340-1	2.3490364497188	0	1.66643322599418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53532392-4	17.5312848903673	0	1.34679805292047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153351034-4	19.4628332963307	0	1.33997784335589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157715635-1	2.16877398123367	0	1.56644055853339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63372144-4	15.3220714755135	0	1.34519944102312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10449241-4	27.6299652767133	-0.610272705582282	0.605709376358209	-1.00753385930974	0.313678294967071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93016308902745	2.05607979245859
Merged-chr1-72428730-4	17.2781953013999	0	1.34419691266431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12211715-4	40.152703126661	0	1.3472376855094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58073032-2	12.3881336366933	-0.0164114595447643	0.722939622762038	-0.0227010099156874	0.981888770247999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63063970350352	3.16645284050765
Merged-chr18-5123484-4	17.1274702002592	0	1.33898700549088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119075520-4	29.8163010432072	0	1.33860658797625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166472274-4	22.855968701319	0	1.33839740094298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19656201-4	21.3050742295635	0	1.34387072992117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75434291-4	29.2352428494798	0	1.34656985071405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115880824-2	5.49967556554412	0	1.44252063961401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142252299-1	2.07025755486026	0	1.57995487874531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93031787-4	16.0461176782802	0	1.34276471997413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162165182-4	19.746881134438	-0.0354082474623738	1.04091499413574	-0.0340164640358292	0.972864021896642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.06702908365212
Merged-chr1-171631665-8	54.7731477653549	0.0991106950656194	0.250422651150414	0.395773683452019	0.692271992540191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.72954025153472	5.78678436730075
Merged-chr6-38968191-4	17.264748159719	0	1.33892256068531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27926653-4	14.0474300408398	0	1.35268379254141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29007424-2	12.0479633851908	0	1.35735471336534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30974363-4	16.1692119523232	0	1.3388298285669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108307450-4	19.2991614514581	0	1.3398115804725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128803191-8	184.740072993817	-0.214890631055811	0.197398593479535	-1.08861277716292	0.276324679881711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.04791402652795	7.82142354753687
Merged-chr4-128660313-4	24.7782334129421	0	1.34118479484369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24245254-2	3.84514631971096	0	1.39965929549579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77268044-2	5.34015381475195	0	1.40728210542176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120540045-4	28.3849527606362	0	1.33518347789132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137815176-1	2.519196733567	0	1.42736975556383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100845649-4	32.3595683978812	-1.79295678089248	1.13050970809595	-1.58597203372295	0.112745653703064	0.979344996747344	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	0.413263464506793
Merged-chr2-60019310-4	16.2618532517908	0	1.3390550611825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-51926542-2	2.80909291832763	0	1.55574727847582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73935416-4	42.2970547254665	0	1.33678545243988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17394167-3	13.5627360747986	1.08169121080419	0.647198115936195	1.67134480797968	0.0946535907131545	0.879383786972546	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01628926503709	3.18391710358833
Merged-chr10-14103323-4	21.4575780208903	-0.0194887622547166	1.09620477006214	-0.017778395776924	0.985815639709351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.904676873936758
Merged-chr16-55777939-1	1.37140235963544	0	1.63107178540469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12813411-4	47.7117407836518	0	1.33645007589493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64276496-2	8.35657529937626	0	1.35925693027536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76219559-1	3.11971738935974	0	1.43492667262122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30434034-2	5.49955980345629	0	1.49824631454641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67324011-1	2.2707427313697	0	1.56751231337274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-160509240-2	4.5495441131257	0	1.41727776509785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117865837-1	4.04126801890729	0	1.41384392922671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86579088-4	69.0203123516876	0	1.33309026545448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55215626-4	25.2142561227521	0	1.34092681983215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139493834-8	64.0693336910967	0.0382097366964254	0.281783506197932	0.135599621184307	0.892137804938285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74721558947515	5.78990696432752
Merged-chr2-84405037-4	34.0418214229588	0.834124541844557	0.992060225683507	0.840800306523592	0.400459815402003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.25298535761957
Merged-chr8-36238250-8	82.9260440027435	-0.649077681357309	0.224115068401556	-2.89618045759569	0.00377735116037053	0.100851194364726	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14428470451915	5.47677795591172
Merged-chr11-69419021-4	84.7782278753889	0	1.33768577611069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106819665-4	26.9859250757081	0	1.33496839077914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82383514-4	30.5414615862251	0	1.34074606739565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44937903-4	13.8579425118194	0	1.33722230714442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17800920-4	25.585884208694	0	1.33732519316058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66310828-4	20.52779710354	0	1.33447933005644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24039595-8	89.1855084979991	0.190970659072629	0.222673080296375	0.857627957624917	0.391097932185067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.36365359145153	6.53469967190438
Merged-chr1-191190099-2	6.1153685583986	0	1.48396764916116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24593873-4	13.3049136465716	0	1.34290798110641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19327291-4	45.1038382357495	0	1.34049771212281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3156372-4	37.0422712859815	0	1.33597990277572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25830617-4	32.5160959317874	0	1.33875058955726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10023854-4	11.9681597890384	0	1.34758082252454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-67448002-2	8.71964940687079	0	1.36377458261414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107781486-4	15.821118642009	0	1.34026685996288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128811572-4	21.0425841172463	0	1.34631488805943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83666764-4	17.1412809753437	0	1.34298528079834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40128682-4	55.1703048152096	0	1.33519597817405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173459694-1	4.9505272872637	-2.47346644117862	0.958512413636319	-2.58052624670243	0.0098649856996513	0.199498049719995	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58419536379139	0.887876939341704
Merged-chr13-101540663-5	55.8513357923906	0	1.33327477388764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27742324-4	22.2139090583113	0	1.33737745289162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105801417-4	15.9043564711882	0	1.34327879597436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119978380-2	13.0949942609786	-0.58743623745663	0.625821199740718	-0.938664650063004	0.347902948396585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3639050967461	2.11005512232597
Merged-chr16-32124543-4	25.0470950663674	0	1.35308122790586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115513925-8	90.8733625404326	-0.19713257095176	0.203885182069636	-0.966880324262261	0.333603863705386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.95793540758453	6.76555058875592
Merged-chr7-34342247-1	2.29645967577114	0	1.56539255736012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86836859-4	17.9429541137885	0	1.34718169169611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127490164-4	27.9116514399874	3.59070521580193	0.538627089921413	6.66640293997433	2.62148915583531e-11	1.14001223217641e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	0.993458951033742	5.89004008456503
Merged-chr15-9131716-4	49.1730211599751	0	1.33558576189626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103785293-4	18.1113344316512	0	1.33773318977904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-37067489-4	11.5679490719249	0	1.34658873492614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101999224-8	70.1724423184272	-0.58809149039051	0.247105844846973	-2.3799173619495	0.0173165209313245	0.292490605302428	C57BL6J_F1_Control-BALBCJ_F1_Control	6.68764305466546	6.0592599843197
Merged-chr13-94743660-4	19.4378645494998	0	1.33986269827908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84365542-4	11.4913566553039	0	1.34888922340886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101800043-4	17.9508553787428	0	1.34404584389659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60262554-4	29.6028618536536	0	1.33857846697366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31994300-2	4.98248290745603	0	1.40345503406966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116616044-7	58.6691468567357	0	1.34157872846213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53774855-4	13.759676265074	0	1.34537486375617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59380033-1	2.04599655757374	0	1.51795048669286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7897248-4	28.2572580416566	0	1.33646423752881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125470965-4	20.3837671441015	0	1.33698448053361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31583262-4	15.3333451394981	0	1.34123744485817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21809710-4	25.8233441634791	-0.0386923114940147	0.454016182189006	-0.0852223180844844	0.932084647859215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73991810985299	3.70381321891552
Merged-chr11-74837775-9	86.2631372161785	-0.0206900783942136	0.259423330202608	-0.0797541160930082	0.936432818071703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64950951954349	5.66312038789354
Merged-chr14-98956966-2	6.79001005773338	0	1.38920662838213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20401810-4	13.0411406388454	0	1.34740593149938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165643233-4	9.29298074244444	0	1.34618954691828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70950122-7	75.9302480486548	-0.632016518269617	0.234416743619773	-2.69612361519173	0.00701516277734794	0.156478142558004	C57BL6J_F1_Control-BALBCJ_F1_Control	6.31526596895802	5.6331959055146
Merged-chr10-68737505-4	25.0795347897327	0	1.36178673585358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43385377-6	77.0843853595294	0	1.34075390785113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145740191-4	13.52029980695	0	1.34321467667244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45049460-4	71.362311650884	0	1.34093179838375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107869140-4	24.4235297144579	0	1.335871547332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148489505-4	14.8999743636341	0	1.3399083260652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31168945-2	7.08990540715411	0	1.37909632306054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180973897-4	18.3847529821345	0	1.34090728022299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116462591-2	8.79464588175172	0	1.36779510455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66147514-8	63.6888372934948	0.0118112054150721	0.249320228574298	0.0473736346329089	0.962215441935585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06729576201863	6.06173461519163
Merged-chr11-79118996-4	23.7611400582809	0	1.33625299503996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62261301-4	14.7577618527158	0	1.34267089240158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21889592-4	25.9678010502608	0	1.3387618891144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16015870-4	17.5932691619112	0	1.33864590062137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22883007-3	5.67501226000262	0	1.48075403419315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83714927-4	14.624667430919	-0.035003371451379	1.0907423206482	-0.0320913297199079	0.974399217731882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr17-31305652-4	12.1921358216402	0	1.35468107815452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121427876-4	14.2680299792434	0	1.3470717480875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77406869-1	3.05925669973659	0	1.42990632099226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91206433-4	42.3618862457664	0	1.34262363378142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166623693-4	11.6422913613319	0	1.35278130698915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8842478-4	19.2472140120101	0	1.3376242922754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106230496-8	74.4425603418687	-0.0251445688486848	0.236977132643056	-0.106105464979858	0.91549867519888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.46737531873738	6.42797217335527
Merged-chr7-68830078-1	2.89499595410962	0	1.42312623851923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77304737-4	16.9759149151123	0	1.33969414303214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36642864-4	45.5153207804963	0	1.35241079954758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70644553-4	32.699362518913	0	1.33624739002993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60757918-4	11.708703982309	0	1.34707790681273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133468235-8	113.758578329741	0.129770590814741	0.204249681677144	0.635352720009959	0.525198396735369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.19962640847633	7.3453466108447
Merged-chr2-102942260-4	48.7838276698727	0	1.33822422250795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72972005-4	19.0551043758872	-0.0359354165205543	1.33920895661975	-0.0268333155501421	0.978592680812219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr9-95571671-4	21.3915636225548	0	1.34851763010623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8021535-4	13.5476051654247	0	1.34287243938784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103721659-4	36.0939259741243	0	1.35154499425693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30645796-4	12.3681290222988	0	1.3599139609814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51908248-2	7.08667743874301	0	1.37157313892883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35762812-4	17.432877839959	0	1.33641249858878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58549075-4	20.0755088026825	0	1.3536714889696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37037688-4	25.6144526064562	-5.05148822596594	0.712842160158387	-7.0864049691499	1.37640654462459e-12	8.22198718233493e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01602741704375	0.97908007631626
Merged-chr2-167864414-4	18.3979964387743	0	1.34353724656644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94228997-2	2.17162460034071	0	1.85473295674244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-59817941-4	17.5496948689511	0	1.35745296744116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140811128-4	14.6068343349105	0	1.35319301921757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125572701-4	62.1825182061718	0	1.33718673452575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98708174-2	6.33683964267006	0	1.3947850399558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23314460-1	5.18012148988754	0	1.37553210913578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-103551-1	4.01487831691703	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167337910-4	31.738594257611	0	1.33568786851432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84061828-4	22.4773300219447	0	1.34688671246485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4544589-4	13.6627871407781	0	1.34551693113838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66937329-4	30.4064362991918	0	1.33855617101063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131659748-4	26.3546455428569	0	1.33614463885851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69502526-7	83.3084061166723	0.69903280299474	0.210272886898398	3.32440769376276	0.000886065600322517	0.0326546711646994	C57BL6J_F1_Control-BALBCJ_F1_Control	6.09837580228292	6.71183746226676
Merged-chrUn_JH584304-68983-1	2.0530262540665	0	2.12075333790793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-59996828-4	24.7730964071122	0	1.33512252789887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13846238-2	4.30335556461943	0	1.42628946092987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116676308-1	4.27594738322914	0	1.41941977721429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-61999817-4	57.6015019415467	0	1.33615741941074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69667571-4	12.2854955782614	0	1.3426765705367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129536396-4	22.3612516800698	0	1.33859044005314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70497932-4	26.8626625484686	0	1.33784432206681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127084988-2	2.9284180385866	0	1.38817445142386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67290781-4	13.0716610695154	0	1.34184421873696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71250856-4	22.4071094531623	0	1.34101303613854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133467288-1	7.66488527586426	-0.911475540001638	0.65102771470286	-1.40005643295486	0.161496420008483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50811240335397	3.72624816362652
Merged-chr17-84118402-4	20.8575344817307	0	1.33943359795738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72165042-4	12.111030760684	0	1.34054377613282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100881874-4	13.9325011742103	0	1.34845941963359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120499872-1	2.50811804527307	0	1.45173425304963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114913105-4	32.5734732277312	0	1.33680335083941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62576128-4	26.9500324060325	0	1.33856292828577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32917728-4	47.7534179277753	0	1.33643081689086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24608276-4	27.1246416812497	0	1.34197336899355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3685407-4	45.9459206878609	0.165294165240991	0.582743864129427	0.283648057775653	0.776680104215344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75033869392915	2.20070712705612
Merged-chr12-110776227-4	27.4420880468058	0	1.35228058578327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11375282-4	29.8099527378304	0	1.33483589245781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94241332-4	34.4936669760805	0	1.33529635382312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178342248-4	15.3388695312883	0	1.34114523679786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5764411-5	23.7938583898896	0.17377704209033	0.507399034892931	0.342485953145337	0.731985213323681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20674035406241	2.78204821465342
Merged-chr8-26697769-8	95.8688545511418	0.0397571775680187	0.204612601768222	0.194304638250259	0.845937354049568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.94621398268577	6.97788475981927
Merged-chr4-133625024-4	33.4803746176142	-2.92736041404568	0.402771426798527	-7.26804390597944	3.64730256755824e-13	2.67923946310673e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.53270721768928	2.96542491564569
Merged-chr9-116102100-8	89.4766447268734	-0.449360184615105	0.239483847582819	-1.87636948859237	0.0606045612333899	0.670957911219113	C57BL6J_F1_Control-BALBCJ_F1_Control	6.59056623862371	6.1136884858677
Merged-chr15-43382633-4	19.3329149937959	0	1.3471474103386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108345499-1	2.10557963797456	0	1.56019069442911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103347616-4	27.3350906061277	0	1.34885756201623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105049964-1	4.17046991487656	0	1.46461878567309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51946373-4	31.0904580028956	0	1.33960923764433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53150711-4	38.5839516797779	0	1.33259072929157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68066394-4	22.7594299498625	-1.16754974652779	0.894874322834088	-1.30470806540759	0.191992274062017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	1.31794033844355
Merged-chr8-11452787-4	57.5179603668113	0	1.33595089272488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11739755-4	43.2709306130324	0	1.3367463353676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4555425-4	32.4988356371076	0	1.33827317087125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81143297-1	2.36763561537889	0	1.42375701791648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48314823-4	18.6383804969108	0	1.34009951039983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22746954-4	25.3265443528291	0	1.33717125417925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109419189-4	14.4061371388208	0	1.34617711441599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-12961885-4	47.1457328882091	0.139708383167911	0.684368779133422	0.204141958878977	0.838242566223066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26927213904674	2.0560328530563
Merged-chr10-80665740-1	3.03145328239354	0	1.93620228627623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21628415-1	2.18522839909432	0	1.53900429631984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119372552-4	18.854345292206	0	1.34620403260749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113600814-4	34.725358017578	0	1.34101941908509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17900929-4	60.2087887883141	0	1.34049462350307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10418024-4	23.0288748416061	0	1.33579746455025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34034083-4	30.6669499880162	0	1.33869962183237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99339487-1	10.9855265786702	0	1.3542336303718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64619250-1	2.285476107565	0	1.47685317361334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85340489-8	80.1878493931478	-0.338520482381187	0.186500075867345	-1.81512249154243	0.0695050874755345	0.728965280741381	C57BL6J_F1_Control-BALBCJ_F1_Control	6.9160763971326	6.56588973995964
Merged-chr5-66034489-2	2.41197253736586	0	1.48053692265017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120141313-4	15.225509883546	0	1.33736397735768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131001021-2	4.16694022949213	0	1.61846050367098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7884966-4	18.0435260683371	0	1.33683713415628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43530311-4	30.0340462657918	0	1.338581356467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80417072-2	3.53871959058397	0	2.1404357464712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46881496-4	18.7917243017166	0	1.34134018963819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25302341-1	2.90021417889498	2.87276911114575	1.36619370169592	2.10275388298134	0.0354872892177282	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	2.08695703474815
Merged-chr4-102574407-8	109.086661181773	-0.0120778340416086	0.25202077767586	-0.0479239614804407	0.96177684282824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20679694226297	6.22892929638049
Merged-chr15-72837562-2	10.3915022547597	2.0855075618153	0.824457224893543	2.5295521694101	0.0114208193962685	0.219838640779659	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	3.12661511686363
Merged-chr4-21755300-4	12.8112179352139	0	1.34668295495547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37261300-4	20.3803285794798	0	1.34380161119479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55666371-7	74.4832099908326	1.21514742280516	0.252012078263973	4.82178247636346	1.42281054184235e-06	0.000171872351653352	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67688917414631	6.83066368969141
Merged-chr10-86727785-4	24.7785745094574	0	1.33746332984332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105435459-4	26.6387263188902	0	1.34215998451843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89889632-1	3.90957076135719	-2.16018425649905	1.20875855079795	-1.78710980375115	0.0739197432693764	0.757579812288845	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.303163067301871
Merged-chr17-10725075-4	28.9327424804295	0	1.34225195418991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38365106-4	18.3734152887301	0	1.343964287464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-36864238-4	19.4115608044085	0	1.33870860675245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-26362280-4	12.8529104548347	0	1.34429924369555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22801550-4	29.8771438000333	0	1.3393340415488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5816118-4	30.9257937772308	0	1.34699702740468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108765063-4	26.4704636001361	0	1.33407661274758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120454828-4	42.2683930138237	0	1.33922983404245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87433091-4	33.3416160875986	0	1.33978455250799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149792514-4	86.0919082914213	0	1.344868941778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68160834-7	38.4922941991264	0.941583623017615	0.363271700772924	2.59195423429414	0.00954324659306415	0.194730233315456	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77326394234573	4.78255403618855
Merged-chrX-38462316-4	16.5502361770807	0	1.34001922639499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68264477-1	5.44337402210685	-1.96379760284202	0.935639715270166	-2.09888226289643	0.0358272807854457	0.474788191018737	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56481436735453	0.723581231604105
Merged-chr10-80982567-2	4.21621860143407	0	1.45526541712659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93564839-6	47.9242332394324	-0.439061180492819	0.311978130857746	-1.40734601904843	0.159324809641289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.173802912495	5.67559233472111
Merged-chr14-103477446-3	25.8647819560592	0	1.33837123255411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95679908-4	44.0732335415531	-3.8204224668028	0.453358683536854	-8.426931269956	3.54848136205276e-17	5.35810828777294e-14	C57BL6J_F1_Control-BALBCJ_F1_Control	6.34591718737496	2.28733524435458
Merged-chr13-32904599-1	3.83563417365942	0	1.42328345356163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34945721-1	2.73171509233893	0	1.41679331178324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126827120-4	31.8515681034851	0	1.34235346999582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157513800-4	16.2471056040955	0	1.33716242591367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13980484-4	16.0743140877168	0	1.34081159390562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191894590-8	125.549290256702	0.0667367034875566	0.178430697131484	0.374020303459213	0.70838921069332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.68132247098367	6.74562575777057
Merged-chr2-32078715-4	23.5500288608422	0	1.34536200854994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50157934-4	24.6726744559438	0	1.3647738462081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88446729-4	34.742875353478	0	1.33777285675047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3159839-3	28.2697254455426	0	1.34308535821239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131435907-2	7.31537456200171	0	1.40088824327318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75709413-4	12.9402384800875	0	1.35084930943753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-43301-1	15.5757409784077	0	1.35021199596218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107381641-4	10.6540699804621	0	1.34646342437255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84095303-4	18.5953057642266	0	1.34242158753673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35776898-4	35.2109687612479	0	1.33665941477404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142504276-1	1.58350698122862	0	1.47996464710131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21348600-1	3.2846479291929	0	1.62808973664634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40068905-4	17.287810820015	0	1.35359499365134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36640701-2	3.65807827628046	0	1.41617171142985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177709025-2	2.6535260248612	0	1.98421344294941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79140361-4	16.2825345886884	0	1.35215688627214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91523132-4	24.1600067951235	0	1.33653690649002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22807471-4	17.9365025464979	0	1.33889080851575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5804792-4	29.3109554137018	0	1.34069140114678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94160607-4	16.5329100518507	0	1.34639079513428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102417859-4	15.2713760777066	0	1.35296281068273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55321872-5	27.2435869036458	-1.88344147424419	0.447241015587362	-4.21124496323457	2.53967165621229e-05	0.00189895476698822	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07808350328669	3.30090514877065
Merged-chr5-104960551-4	20.2047998357911	-2.87990280271744	1.0348607609785	-2.78288916858184	0.00538772073009909	0.130448866598816	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5421157536329	0.679405493272835
Merged-chr12-51845144-4	35.8082593194572	0	1.33428668902774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44234650-4	17.6556170031937	0	1.34134206300971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65524156-4	12.9711071924821	0	1.34474576901651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51916255-4	25.6071009092355	0	1.34536954139971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118103428-8	130.501547969444	-0.00482298471736104	0.243658145407436	-0.0197940631506336	0.98420765387648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.31489821070286	6.29625807344351
Merged-chr3-103206632-4	54.8713496301362	0	1.3397594107886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84338942-4	38.9138732030719	0	1.33335805131833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5774044-4	25.7965947512496	0	1.33691725599477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103037224-4	58.6882641709659	0	1.33564268358459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62582439-4	14.966229806687	0	1.34959682091163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117475149-4	12.3176629137998	0	1.34125741829357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36641211-4	33.3178132764878	0	1.33842580067746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32583599-4	16.8921594602833	0	1.34374023937684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99165084-3	34.5320385910208	0	1.36587044710524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25632918-4	41.3910819572439	0	1.33789442103183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173018126-1	3.51043199314125	0	1.3824509743866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135314030-4	45.2897842872906	0	1.34311009635123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79580300-2	8.32130398959151	0	1.42504085619145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75512674-4	23.3754179709704	0	1.34101546310897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100440197-4	26.7446731365589	0	1.33681919292746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27941253-4	37.8709029809508	0	1.33276014211241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21189704-2	11.9086880295619	0	1.3467320483624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166639213-4	31.3759433411204	0	1.34251166806181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108995147-2	10.2476351969283	-0.0356742049865157	0.724067237320841	-0.0492691882020731	0.960704773938172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	2.0616452534421
Merged-chr5-97000715-2	2.88781679496792	0	1.46879726746641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94512449-4	21.6718881594471	0	1.34183212373974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83927988-4	24.9498763579761	0	1.34002493474458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127948524-1	3.2187935507448	-0.690789163942002	1.41610797663082	-0.487808257097398	0.625685662208631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr1-166138359-4	34.3641748381488	0	1.33480359594481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-11437690-1	2.51090547258702	0	1.57150427112967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43912477-4	16.6709335851263	0	1.33913741761531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101155718-4	40.3492411165792	0	1.33248257385673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138237438-4	14.8818150350204	0	1.34069607713918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-141008662-4	11.8229990649452	0	1.34478485602953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70029176-4	13.5434529395054	0	1.34498553200309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8433085-8	58.7946817165368	-0.0480890096072438	0.230136562147928	-0.208958581628299	0.834480571895982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06334415890626	5.9977490997964
Merged-chr2-11333073-2	9.088863126341	0	1.35489217548415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78482129-6	32.1880390791431	0	1.33549723107569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122868261-2	4.3410682446691	0	1.43671103963222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138521064-4	22.0090700955257	0	1.3557579328877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85792568-1	2.78603034147289	0	1.46665200366987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46366540-2	6.5103255748755	1.51948656590673	0.779824650075446	1.94849773697167	0.0513554353406071	0.600608887624798	C57BL6J_F1_Control-BALBCJ_F1_Control	1.55500983080492	3.13641647300139
Merged-chr12-80832407-4	19.405036521566	0	1.3416121918501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68085780-4	19.9333044365338	-0.750967933892106	0.74012910853676	-1.01464450624942	0.310275315858584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9450324219075	1.28051966905443
Merged-chr17-34391666-4	11.6292159824399	0	1.35319070622214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8666697-4	28.4048470763267	0	1.33763905891868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146177475-2	5.10669685743725	0	1.75846485153375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108529568-8	114.261136351025	-0.420907432975564	0.198453503864828	-2.1209372713432	0.0339270816164112	0.458652631083437	C57BL6J_F1_Control-BALBCJ_F1_Control	7.0592969029221	6.64626130707998
Merged-chr17-26465209-8	107.300544830955	1.33297782081783	0.184696886279628	7.21711041083674	5.31038603180122e-13	3.74892564029458e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.91142535082481	8.24871774780329
Merged-chr6-89412743-2	3.99081777731256	0	1.48703290948818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49173260-6	25.1170926260789	0	1.33619175953861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39251060-4	29.1241558930965	0	1.33684801820544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127300920-2	3.67427647176611	0	1.40979911925237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26800048-1	2.19821570177058	0	1.54748258887238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6501044-4	19.6432964719297	0	1.33880133670147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37257696-4	14.8186805200654	0	1.34855501931993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81480535-4	25.8863211137965	0	1.34163172535969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55829019-4	22.3843394294101	0	1.33911634875665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51594944-4	17.4021433531979	0	1.34467327524532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114679802-4	28.408115056631	0	1.33741441460114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-37883666-4	25.6407190520073	0	1.34058358343061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135471937-4	30.4106772911854	0	1.33694685709403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99241819-4	38.7904276915247	0	1.33634757675383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4266176-3	28.3092183592848	0	1.33729669040605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32168742-4	21.754042448137	0	1.36034053855449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-141080550-4	18.8833768031639	0	1.36372159723952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31280910-5	62.287138199484	0	1.33541279605794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120824522-2	6.17876931049678	-1.35135667923857	0.891670320017923	-1.51553399154455	0.129637228927392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45857341618675	1.67689200618025
Merged-chr1-162206890-1	2.54393324350383	-0.688761904950536	1.43444684080157	-0.480158542902612	0.631114663004299	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr1-136127109-4	18.2473680761443	0	1.33640194854207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170709701-4	44.7696077959522	0	1.34238014574851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116146567-1	4.45381713903453	0	1.36580984272853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69571639-1	1.75457159564663	0	1.46054474468227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9767181-2	2.84458275019704	0	1.50343888510033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6357234-4	30.7693263301687	0	1.33687886119157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25285240-4	16.7566205544333	0	1.34530183398037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70805928-2	5.20386941560818	0	1.39767811051673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16086723-4	16.2740689357169	0	1.34931624440188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3941143-4	14.8370339716388	0	1.33864844141463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62543074-1	9.39719706929718	0	1.3551359805042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134189975-4	26.620610599053	0	1.34477890670499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114792821-1	3.27103888904415	1.56651689637646	1.13814222365933	1.37638061730092	0.168703825620992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67113172082159	2.42390598974786
Merged-chr3-146655417-4	12.8874966057966	0	1.35191686195113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27490864-4	72.4555368472445	0	1.33641041258909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31882495-4	13.2792890655764	0	1.34289255444896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29485527-4	21.0243779811216	0	1.3516337936497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124478551-4	20.9038503832153	0	1.34197290726908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44118229-4	18.6790841449038	0	1.34233487208745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86471965-2	12.1149633589312	0	1.34243014903523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16295003-4	35.2767583573566	0	1.33644354428428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97380006-4	17.5768651635884	0	1.33986900863463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3173889-8	96.4072545001179	0	1.34186061385382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83994121-2	10.4534707542304	2.63043011315136	1.08006729542221	2.43543168495173	0.0148740329351258	0.265355285960126	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	2.40799833663131
Merged-chr7-25181645-4	11.4130222739583	0	1.34682871778896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51501481-4	14.9520551625133	0	1.3413822408768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-132426040-2	6.5645382158595	0	1.36475013324096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31233570-4	19.5627596360716	0	1.35006985376759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13685828-4	22.5480116421561	0.93108360566299	0.688064893241106	1.35319155912337	0.175994441157799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	2.85476293333406
Merged-chr16-91847710-4	22.5887438434197	0	1.35620289365019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149856953-4	12.4220119051786	0	1.34202190080479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111977938-4	26.2740263812516	0	1.33613193623895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58699314-1	2.35776845597443	1.17098322294579	1.4887579998302	0.786550415231586	0.431545095442625	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr2-66180062-4	18.1539930168201	0	1.34201515758941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132323639-4	14.6666244677452	0	1.34160252594399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91734862-4	26.9277988640369	0	1.33937721002975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163664131-4	18.3013467028645	0	1.35150263291492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32996768-2	4.12933797496856	0	1.42522119895775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-18468211-4	27.4087907104551	0	1.33546839019016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68732433-4	19.2477710510625	0	1.35442075878406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81719387-4	21.1251564898302	0	1.33714780813812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108222818-4	35.7239626159284	0	1.33486444611857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51921946-4	24.4362098669416	0	1.33640275542803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77923713-4	12.5664048589936	0	1.34081219185819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31169533-4	22.0735670668833	0	1.3601715034016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12783406-4	31.4137476585077	0	1.33626793219975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74817048-4	19.2512826048658	0	1.34137502108949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62282658-4	14.2892088432016	0	1.35016978579823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66438683-4	25.8629580337528	0	1.34357280418184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17177799-2	5.19428739160455	0	1.41558780267334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44314476-8	124.875407538144	0.105303484642049	0.246695030302958	0.4268569355156	0.669483533740299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78194529499317	6.89994232485205
Merged-chr12-84761458-4	44.3128859022712	0	1.34608428660264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97593270-8	41.7186542444399	-0.0760918463127618	0.262840609061781	-0.289498059620142	0.772200264553244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60513141284921	5.55672899600788
Merged-chr16-85133687-4	31.6177796354104	0	1.34897782062815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53124841-4	27.6310300674532	0	1.34570562871099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49982630-2	3.15896325826678	0	1.4215530132867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13926168-2	2.92750899762796	0	1.44566745197488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54393377-1	4.65792406266856	-3.20476102199978	1.15567131306699	-2.77307309246501	0.00555296466495096	0.133622667650318	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20901759158499	0.303163067301871
Merged-chr5-115525366-1	7.39257235287462	-0.202175748522403	0.888199931648028	-0.227624143302141	0.819938448972621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08126271691723	3.45583624514549
Merged-chr2-66192047-4	17.0805583908741	0	1.35108509585697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72838248-4	32.7688287484564	0	1.34248420454237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49904539-4	26.7251434182472	0	1.34338620475232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17788056-8	77.949334453653	0.711465155660296	0.289585336125686	2.45684109968712	0.0140164668509505	0.25481202927182	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98299343731022	6.73553408376183
Merged-chr7-19326548-4	46.9039073393558	0	1.35021995140852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37018647-4	20.985605889843	1.46170821982561	0.799384488604791	1.82854213543323	0.0674682279879433	0.71686889197136	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.66320599947928
Merged-chr16-24608617-2	7.02731966221996	0	1.38073375058723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17347985-2	8.61940049599462	0	1.37934847302131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189657619-2	3.75143134199049	0	1.45543511115645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110840542-4	27.9170099319566	0	1.33475172401339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32647763-1	2.6934797599032	0	1.57540063070065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35447603-2	6.04553052811394	0	1.39112623432317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-26361904-4	16.1325582970794	0	1.34019107884589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4541952-4	67.3308404963259	0	1.34063189986208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52061617-4	20.6514725630986	0	1.34870814450541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61469048-3	11.3734050119268	0	1.34836650219379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80032763-2	6.44261300168531	0	1.39390154663545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155201009-4	43.1262245566431	0	1.33633051692056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151686891-4	27.5698008106528	0	1.34134888738607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113677573-4	40.8045398716971	0	1.3341844885455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134060998-4	18.3417122155338	0	1.33915938750979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37356786-2	5.64622438677576	0	1.44751375162581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120526159-4	17.6601160892375	0	1.34417042317615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5803053-4	39.7612695873842	0	1.34073742207362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4530435-4	32.5817917596734	0	1.33827049742938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120150726-4	20.5722341889308	0	1.33997483231011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25909961-2	6.06786470527031	0	1.42304317908482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164868685-8	79.9897402824908	-0.670744463481968	0.212841373471305	-3.15138195428154	0.0016249983388561	0.052736289374256	C57BL6J_F1_Control-BALBCJ_F1_Control	6.87120035627822	6.19875647794451
Merged-chr11-11777033-4	18.4561357989304	0	1.35089366456215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99196419-4	17.0378325403055	0	1.34486639790851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99268461-1	8.03019137076106	0	1.37472967774596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94505457-4	17.4543657083649	0	1.3365279052966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114078147-4	25.9659344700638	0	1.34834571788979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44124510-2	3.74339857916249	0	1.4042760790696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34675080-4	22.9252136118017	0	1.34082601197626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-133047473-4	13.5609607205156	0	1.35230239595284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29947903-4	18.5434659309701	0	1.33812516804097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68194648-4	37.7673007828082	0	1.34758512092584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124690535-4	30.3432956489049	0	1.34315737916552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152543782-2	4.52229144460018	0	1.47439975882226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4065100-2	3.40733584783276	0	1.50391077050078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78205202-1	2.39826096425471	0	1.45528808510128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22398955-4	16.6775036081936	0	1.34117728546878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84202631-4	34.9183989659651	0	1.33697275048997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61706167-1	3.06269181202902	0	1.41143817049255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129616379-1	4.53816915927135	-0.960486588794766	1.02857097203251	-0.933806820249647	0.350403550758925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48316304163271	1.14143228603163
Merged-chr16-95724375-4	35.3742341677825	0	1.33447362664984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5576917-4	21.1326344384356	0	1.34112856590311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40522647-4	15.7285888419075	0	1.33696918489402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109262034-4	29.4077642650789	0	1.34111528018576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30610842-8	109.06150816844	0.123058081295383	0.175966283126769	0.699327616113425	0.484347312275653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.87834205936855	6.99449347586557
Merged-chr8-77443349-4	28.9971379627603	0	1.33952616988931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7040295-4	23.551935264736	0	1.35928227822728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142394440-4	13.4862182094644	1.70761026354302	0.943200724627586	1.8104420606942	0.0702272616798911	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.62805269464997
Merged-chr3-145105610-4	39.9286283363015	0	1.33337909226058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19669094-4	20.9296119561244	0	1.33846678114846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123573054-4	18.9621036148704	0	1.34363983950704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52630404-4	12.5736447285686	0	1.35194865803663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75504278-2	3.82979079984717	0	1.91767794628044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64721269-4	41.1039012313031	0	1.33888629363146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-132467218-1	3.09320872716273	0	1.49613102200872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-113656308-4	67.7205244658869	0	1.33948732452438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5874921-4	17.7797964991224	0	1.35384763736141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68871960-4	22.4509884431481	0	1.33729838047726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40098616-4	17.6057497975135	0	1.34729437107619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-87925578-4	18.5548321482223	0	1.34801393791888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20505698-4	35.0632774852497	0	1.33259059343877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92874222-4	17.1922065815569	0	1.3513360816053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117876633-4	22.8107120085086	0	1.33769985417547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26494697-2	2.20584902003718	0	1.67500044669297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114875253-4	38.7118372161961	0	1.34025974562505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91766495-4	109.722461854317	0	1.34076024193034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83981376-4	29.8783811093685	0	1.3437851627037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-71489078-4	14.6188605434094	0	1.35031027877372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89980891-2	3.88811456922187	0	1.4668612872774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39137590-4	13.8281596071371	0	1.3392740610953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31160689-4	45.165003040273	0	1.33642070217811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83616773-4	29.2705161989399	0	1.34386636370695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70842508-4	19.8138023795194	0	1.33973253050201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3868268-4	27.0986274245309	0	1.33313601318306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97348613-4	12.3987495729846	0	1.3444073090241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81751320-4	10.2617290466195	0	1.36250540945171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36709069-4	62.5144052405305	0	1.34000772983289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21937483-4	16.7359949444492	0	1.34679460141937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92921012-4	20.5327707695707	0	1.33639063779154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75155078-4	22.2953857532209	0	1.34721515853137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29678747-4	15.1199471480098	0	1.34474568298811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49046512-4	15.6772069431025	0	1.34519774897571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121147045-4	18.0684306298227	0	1.34826874159875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56094958-4	14.4305118055313	0	1.34577778987714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30676017-4	13.8790361758138	0	1.34087930894215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70720174-2	3.47402671590723	0	1.42736777260608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102366260-4	16.0964524750806	0	1.35455247262839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170898603-4	16.791622148979	0	1.3387646975253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153406397-4	21.1281652457563	0	1.34085367103656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184614936-4	24.8473369106863	0	1.33711510890434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97580427-4	15.6975750777896	0	1.34719771879407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128295103-2	4.48848252331064	-0.0411071048941782	1.36898106300313	-0.030027519010381	0.97604510606575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr7-99377379-2	10.2530926196175	0	1.35265826669624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121315014-4	30.5553518622753	0	1.33916710531601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54089102-4	17.4724016285944	0	1.33843542095195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110968257-4	19.1263773054064	0	1.34246641332492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76957878-4	22.5396001283721	0	1.33447950535069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90881193-2	5.15131603426676	0	1.38737301659757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43795693-2	12.2764563599194	0	1.36970138283321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121600611-4	26.2261570289143	0	1.33860395716304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9826343-4	11.8765248566451	0	1.35746407163571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28209115-4	19.7593319208228	0	1.34468269718646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31110455-8	70.2380620413715	-0.218749667280528	0.173388345772802	-1.26161689994532	0.20708667200589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.9314436169633	6.69720437010571
Merged-chr8-46789977-1	3.2877825409598	0	1.3891605130246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74260190-7	47.8348237759445	0	1.33540937076414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127391566-4	11.5082470498878	0	1.34428535867117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82822142-4	18.5618838277138	0	1.33848279617963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131643006-7	48.4427378189786	0	1.33480625367113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102922703-4	26.8973901959227	0	1.33493068102596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56265690-4	17.8363757590117	0	1.34177753391245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26498351-4	13.0856377673162	0	1.34617034724074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19830935-4	65.7411141862342	0	1.33607166786812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66444380-4	13.2121691720001	0	1.34963189879117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127600356-4	32.4771032187789	0	1.33477700575216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106691966-4	26.718787336765	-0.689289401039405	0.420027601346228	-1.64105739439543	0.100785501748775	0.915388319057925	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24943345517823	3.5571373108782
Merged-chr19-29420148-4	21.0593096719043	0	1.33960818835946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128321356-4	30.0627981069918	0	1.34076460189286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-92255389-1	2.33888652003894	0	1.45234038980216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-156087590-4	9.45615975718706	-0.248407009261847	0.83322658758091	-0.298126599612047	0.765606540582925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5893535768094	1.40024388691264
Merged-chr3-10342719-4	32.327743755882	0	1.33605187277709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76149637-2	6.0712891554534	0	1.43247203013643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8969734-11	89.4919729196161	0.3062145307685	0.186762190362441	1.63959594912784	0.101089205929263	0.916615203521065	C57BL6J_F1_Control-BALBCJ_F1_Control	6.27191228027382	6.57351438134716
Merged-chr16-92039689-4	19.5389683727051	0	1.34243598711796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82004949-4	41.0246484154682	0	1.33602551431811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67098359-4	11.6295925085292	0	1.34357710541421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136658982-1	2.9023774141677	0	1.42190754692623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25747709-4	15.834944170244	0	1.34529494789132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88404309-4	33.9054900948091	0	1.33833394255708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44381145-4	30.703619257161	0	1.33355507755578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180772342-2	2.62566378693906	0	1.5357990087986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55855789-4	28.1216074156506	0	1.34237276845558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55631805-4	17.5242940870871	0	1.34899122247295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75960779-2	4.73657714961533	0	1.42986203687444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19062722-4	65.9320440387171	0.123985082751164	0.249854063759341	0.496230002769081	0.619732145272669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05638951898838	6.21877284914005
Merged-chr3-27280618-4	19.2113553499843	0	1.34113124583277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-151536848-4	33.3225655319767	0	1.3414933707714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95834541-4	29.2201961368419	0	1.34441807365938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19419346-4	14.7302209220393	0	1.38001729567921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-164382125-4	16.8427288838786	0	1.3416955898101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42421645-4	34.2703802414502	0	1.33559910102151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41584690-4	12.4813994465324	0	1.34229346504629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73686939-4	16.7330500942205	0	1.33997901964283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97441660-4	48.9571858134315	0	1.33722184666219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76063277-2	5.46896950043459	0	1.52543901321332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50948276-4	12.1729360272262	0	1.35066689801143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56822318-4	58.8611896026587	0	1.34090379539477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40921417-4	32.2827489189846	0	1.3364636122695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57976568-3	18.1153279550497	0	1.34986509636494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25278938-4	24.0052953470733	0	1.33812426205423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95802938-4	21.015578854508	0	1.34253126738647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-30961579-1	4.12249112668629	0	1.43532882356426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122459407-4	13.0576155564526	0	1.34500411834112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29399389-4	19.695149501441	0	1.35193278804909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37230517-1	2.41073645288892	0	1.4563982453994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81199959-4	12.1312492257366	0	1.34708715538038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53265072-4	32.1423259538596	0	1.34656481079168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119432439-4	21.4681985586181	0	1.34378092253238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136126404-4	15.8000575131135	0	1.34681995324241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46174557-1	1.95209084301077	0	1.59127820371711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67706304-1	2.22035569959688	0	1.68836213901412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63255680-4	22.3141359053354	0	1.33827303369593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38788793-8	60.8101282670998	-0.120841927579594	0.247455299557856	-0.488338410191698	0.625310159129621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61073097756734	5.47890430837754
Merged-chr14-8111736-4	33.7061919234962	0	1.33892079120836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63586399-4	32.0038923207966	0	1.33715186524575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64338776-4	17.026039128226	0	1.34154387305552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5349069-4	16.3398835710327	0	1.33632197299053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138125468-1	3.55948270418176	0	1.45161850617425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117088639-4	30.3936688191692	0	1.34131154074408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66477631-1	2.23588234330891	0	1.59932992682778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38565047-4	22.3183061986103	0	1.33948994095895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165477354-1	2.50875463380796	0	1.5636762223646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46789602-4	21.9733141539707	0	1.3353346479656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121706746-6	22.6984061928677	0	1.35144831687837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7987154-4	20.2768891096773	0	1.3411023890625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126773527-1	5.37440174098395	0	1.39507001631438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110459315-4	20.7118089829529	0	1.3437841148752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36165080-4	32.5143818460319	0.859488826801785	0.985202552981391	0.872398091337487	0.382991241411344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.21849460895724
Merged-chr1-149947182-4	23.5054569920423	0	1.33688098985287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60847195-1	1.66267441584315	0	2.34939830527119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5636956-1	2.11327426825812	0	1.47537280102055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80014029-4	15.0481733911513	0	1.34307194024138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32561900-4	37.4709212416677	0	1.34541951812332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45949685-4	49.6759596693785	-0.085088746516943	0.349939024653097	-0.243153065312717	0.80788682427911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61666161647878	4.58829778021619
Merged-chr10-40077800-4	16.8099450506428	0	1.33834812617154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58735959-2	3.08026238828849	0	1.67808250722829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95540641-4	23.0893280422746	0	1.3414752640862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51817965-4	17.6620374669674	0	1.33674582728961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112395170-4	23.8245784733507	0	1.33590195199372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97531891-4	9.73703852744496	0	1.35251876505663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64040924-4	37.1499545590804	0	1.33577254559944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43411573-4	24.7319653938034	0	1.33916651082989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96636766-2	3.96376895325004	0	1.45120854220398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34059630-1	6.48355211956227	1.04937146583422	0.790357115550722	1.3277181228425	0.184271244254084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57167923429536	4.30020118131177
Merged-chr13-89384882-4	44.4632837846135	0	1.34010925191853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134094443-4	20.028309659011	0	1.33746669770576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128491409-4	28.686525272611	-0.0364038299023733	0.559580464582244	-0.0650555768231663	0.948129750024649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88854826306555	2.85476293333406
Merged-chr3-95263423-4	21.4266822247839	0	1.3386893571522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122891717-2	7.91079768457647	0	1.4469918944983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114093390-1	2.1682250945016	0	1.45112628195411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95831730-4	41.5488662618579	0	1.33415507099394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166181161-6	38.4083119895048	0	1.33624320817262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31101039-1	2.99832007442188	0	1.54042349014609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72140634-4	66.7108784156526	0	1.33886998730433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-52273226-4	30.0440111679435	0	1.34263552353365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65604515-4	13.8931865195594	0	1.34494375070886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55651294-8	123.047304242074	-0.226806930648801	0.225232324730121	-1.00699102990908	0.313939084820224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.93059679198035	6.69852092845641
Merged-chr11-23805986-4	19.0827279458697	0	1.34031629018978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54601282-4	38.264714104448	3.72704612699163	0.453892178921305	8.2113028161206	2.18801299688354e-16	3.04969739737416e-13	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7864504728774	6.35714729817948
Merged-chr2-150837053-1	4.25426057019399	0	1.4673984490434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92832658-4	24.2845615946847	0	1.33929739811708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60852524-8	46.4861440788587	0.129531163626583	0.263739245260292	0.491133443180761	0.623332069252807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49349445384709	5.60915784713298
Merged-chr17-50157538-4	36.9722390336876	0	1.33633622135692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62265676-1	2.13149593749451	0	1.52666647060251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88953398-4	31.6242713488297	0	1.35249188789613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120578490-4	19.9962244384604	0	1.33583691742443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102976101-4	40.7018475912993	0	1.33716232577433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29814712-1	2.9673100540961	0	1.49433562159887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99169934-4	32.5168332498521	0	1.33935367140088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17773871-4	30.3994050688322	0	1.34741248497994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68905829-2	4.46213741699878	0	1.37698009803716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97083952-2	8.26084810860173	0	1.39518010944452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105616792-4	18.1996462877394	0	1.34103224336416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22474288-4	12.2081856892223	0	1.35837711787976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25706992-4	41.225777566989	0	1.33893340822564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146120355-4	34.4254099657145	0	1.3340852335789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127288164-4	20.0098492349061	0	1.34429614607668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83404267-2	4.53808943957699	0	1.48148172389976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4261301-4	10.729495136533	0	1.34915266408563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80753868-2	6.60818885611962	0.608995006765764	1.33549099528741	0.456008321220244	0.648383994464274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.827114643704772
Merged-chr2-165987141-1	4.14686482256739	-0.51384489371867	0.853789223135821	-0.601840454054229	0.547280344033336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39996568317471	1.92705437476988
Merged-chr17-56074649-4	30.2560021476627	0	1.3380342139317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44120317-4	11.1054081240179	0	1.34240571487862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65089194-4	17.5198301288183	0	1.34326191522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26230909-2	3.6032109559705	0	1.37856365647806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49592489-1	2.24793946322707	0	1.63080563667046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16238174-4	11.076054190895	0	1.3543831960861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64374925-4	71.2288860821361	0	1.33636095662418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3759653-4	20.5649979308558	0	1.33810521313361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3660129-4	24.047759455705	0.21472810845126	0.487381809436985	0.440574728669726	0.659520901373067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71969401386909	2.92274450715465
Merged-chr1-134788418-2	4.0639782699232	0	1.97198205637976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-77741695-2	5.4117532363721	0	1.43858896979286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3209455-1	1.30739733375352	0	1.59814829191983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66182784-4	14.8412581580609	0	1.34864435035761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167266495-2	3.51698059415959	0	1.58510182825305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12754768-4	35.6705548971147	0	1.34002178736843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19935454-8	35.4682273627797	0	1.33672736847145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120327279-4	34.8734782721276	0	1.33679668867977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79357779-6	54.2703666980761	2.83083010087701	0.483544612392275	5.85433076561817	4.78934611288655e-09	1.18878568653151e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6585960826409	5.4824558729593
Merged-chr17-8506229-2	5.08845327660391	0	1.38878326713517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40240714-4	25.6805536208415	0	1.34590084087051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85697663-4	25.4845485548119	0	1.33835504821494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36471746-8	63.4542873901153	-0.238557799215331	0.21831335729002	-1.09273111905112	0.274511872360625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2035620848314	5.99950653991929
Merged-chr12-36036906-4	24.0861389595837	0	1.33453780049386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39681486-1	2.53440997108061	0	1.49419818445513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-93552944-2	5.8492208287533	0	1.39568554952234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119230769-4	20.2999236373659	0	1.34035324490298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91681265-4	25.0108647336249	0.320238772764414	0.620087608512051	0.516441174389619	0.605546314571502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39460173764953	2.53978940447978
Merged-chr17-12755272-4	57.5202603926492	0	1.33677807415544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40152735-2	4.91642165572097	0	1.44992260475694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17866811-8	88.2643412597602	0.0181126054738997	0.306938467704945	0.059010542436509	0.952943711096424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80117590463285	5.86869925272962
Merged-chrX-109142473-4	13.6174271304295	0	1.34211143448128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126251890-4	16.2103882050477	0	1.33981997468054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52628899-1	1.60596103527957	0	1.57641889845604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118042855-2	5.2805528207001	-2.8226055327742	1.18604210017655	-2.37985273233895	0.0173195581886202	0.292490605302428	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	0
Merged-chr2-3752498-4	12.864837846058	0	1.34652063433579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84539361-1	1.35675063301681	0	1.6657895815773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-5102780-1	3.04857079616395	-0.576949386084279	1.14248397785581	-0.504995603673223	0.613561923801686	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72220530150145	1.06872581468896
Merged-chr7-29307941-4	17.0496768656131	0	1.33874805593138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16228757-4	33.9774309280832	0	1.33771137811556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149326877-4	26.4579086919432	0	1.34015012257411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38564668-4	16.4646007518349	0	1.33871297499108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-6717733-3	24.6688040748484	0.677854400457966	0.742982736613971	0.912342059988073	0.361588679768954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	1.92218463282547
Merged-chr9-58271352-4	31.3075992202681	0	1.33978882744685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126852894-2	12.4480528923798	0	1.34222064912122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60260780-4	36.9050122373868	0	1.33408514671475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76599432-2	3.59020785310307	0	1.89216552139591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21339530-4	16.3262332819536	0	1.3418382741204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135489267-4	19.9078957515037	0	1.33922225482481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79161590-4	22.8251257764044	0	1.34620856382996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59003923-4	23.4529788615298	-0.265320641923469	0.63140311970974	-0.420207999677668	0.674333511298186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18907334447161	1.71403462318148
Merged-chr18-23882316-4	19.6402757605784	0	1.3396026263122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74390876-4	15.4765916186798	0	1.34086115812604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81971350-4	22.8510365532975	0	1.34125869846569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59261723-4	21.0248158653272	0	1.37747196221334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75834779-4	34.5084437430515	0	1.336613900799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50083105-4	47.9554978274973	0	1.34143426058322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129436226-4	26.2742073986748	0	1.33897897339806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87407663-4	17.5594816581572	0	1.34238005909298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122863063-4	36.9552962725352	0	1.33650510427155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45591983-4	41.5071422637583	0	1.35359318275088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59236674-4	44.0128997201878	0	1.33641972001201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29289893-4	23.2356466211645	0	1.34084850042905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5574844-4	32.1137779024489	0	1.33777599663145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180777773-4	18.7716866950708	0	1.33916854293276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20000069-2	3.99879033493167	0	1.41561761549985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49852178-2	6.83896936762651	0	1.42349179245632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148465566-4	10.0392831424528	0	1.34429882998216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127240164-4	17.6703235372691	0	1.34404173374352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133481161-1	2.12021644206083	0	1.44821521683479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46804642-4	26.6522736606072	0	1.34210307706578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118107244-4	14.7520796823905	0	1.34825936175216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31352735-1	2.15454161289968	0	1.51458064023228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54884609-4	18.1921148707216	0	1.35064797971202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31331974-4	23.310337768914	0	1.33528287286432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30242756-4	17.773091809609	0	1.3460927206078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83536265-4	13.9215891202863	-2.48179489697944	1.14357858131304	-2.17020057697292	0.0299916544012892	0.423019289465407	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0
Merged-chr5-100861965-4	27.2927600618736	-0.673394170952662	0.783630657022522	-0.859325965514526	0.390160702591924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89431931278994	1.30281892590853
Merged-chr3-104442174-4	25.51926436382	0	1.34017203550174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85357602-4	16.4227417802317	0	1.33743475119811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90565804-2	5.47330936170672	1.13122325920455	1.28043736782262	0.883466296464142	0.376984384689244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr11-50134369-4	32.6273550017711	0	1.34938499265537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75961658-4	32.5896401636242	0	1.34758408157607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82826325-4	28.9690820251151	0	1.33516950597213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3165735-4	24.505637317745	0	1.35630597561976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20423096-4	32.9023915406867	0	1.34010186795342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115423239-4	35.388389235711	0	1.33485679969857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78134600-4	18.6711324236828	0	1.33886134443401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105823409-2	4.48892313652739	0	1.44042235414883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131087080-4	28.5178635093132	0.401775308912183	0.669307261042858	0.600285298393702	0.548316114887628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63412505265868	2.58934039553399
Merged-chr5-118354312-4	22.3948747772851	0	1.34310633260026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45651860-1	3.04362663326059	-1.33559006718192	1.08700870640876	-1.22868387282234	0.219190355092002	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84001395625789	0.577068348605183
Merged-chr18-32361620-5	42.4586426365864	0	1.33411109807448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117962335-4	22.4093774846699	0	1.34063057982786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76319074-4	37.9908166913157	0	1.33802907399229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20829961-4	22.1421833945779	0	1.34225986195887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96466690-4	16.8396698602606	0	1.33927728890369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94178956-4	13.430226686176	0	1.3521721275041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74440689-4	20.4147885447213	0	1.34387355806017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105300148-4	31.3151740125043	0	1.33720829238871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8992352-4	36.1605385133795	0	1.33407443880443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32396989-4	79.592995948506	0	1.3362364728279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19888637-4	20.0870315342845	0	1.33636223287789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35752828-10	92.1852778409765	0.384802912338082	0.211050327506018	1.82327559916774	0.0682616600507172	0.721773113926655	C57BL6J_F1_Control-BALBCJ_F1_Control	6.65516563865649	7.0137249844354
Merged-chr1-64295546-4	42.8716945093335	0	1.34227221130185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91849065-4	55.1141957755919	0	1.33879615995168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91727148-4	14.2315535361737	0.586982911918145	0.57820481265207	1.01518164337964	0.310019249199292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	2.63405902917711
Merged-chr8-79415044-4	28.0910431244336	0	1.34018287128522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136454147-1	2.8863386255991	0	1.41036676625738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49251282-4	23.3086170905709	0	1.34391695166274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105506474-4	17.8551471658114	0	1.3378252436009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56025274-1	1.50442895985671	0	1.81132415015096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44482862-4	20.6589325353938	0	1.33667479071655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128845494-4	24.599897886968	0	1.3380544139452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34609667-4	25.9257670166186	0	1.34004529996598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70811052-4	28.3703350887664	0	1.3374328321911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53641286-1	3.56425638554779	-1.81548443282585	1.69690229657857	-1.06988153442091	0.28467263580263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00209815734856	0.765562747387088
Merged-chr18-80169573-4	27.6788901142415	0	1.33410237086786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41161584-8	124.896593384136	0.449441999725383	0.216624313212705	2.07475325857846	0.0380094085921431	0.492099582544037	C57BL6J_F1_Control-BALBCJ_F1_Control	7.01597974075192	7.46773534315686
Merged-chr19-9954618-4	28.6488052899778	0	1.33483615692789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8902194-4	22.2439439627767	0	1.34535655006495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-7733981-2	3.57892653272516	0	1.52204574023797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125478811-1	2.65775584442793	0	1.50673678051157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9123200-4	18.4335655068045	0	1.34318062718877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119423956-4	16.0292742203821	0	1.34052199454675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76604144-4	35.8274726626501	0	1.33407504724702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87713148-4	20.764364660755	0	1.34053695497576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52165027-4	19.4974044758032	0	1.34021875161618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81691796-4	14.9354813799203	0	1.34862561450564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108151911-4	12.0300135045513	0	1.34574595828524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87408390-8	40.9489279542839	0.33154339619717	0.258093861799404	1.28458458440539	0.198937488442111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.58367503218932	5.96260617576744
Merged-chrX-19202757-2	5.24694741543663	0	1.42976324587026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97429935-4	20.3184641570867	0	1.34220624092164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16868535-1	2.55779615211266	0	1.55310301745283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105900900-4	17.4173929725279	0	1.34464999624779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58743522-4	46.7232531224771	0	1.33539984418175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86114370-4	15.5419058310885	0	1.34823078878677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50834178-8	179.801991211831	0.22855689071765	0.170284946260116	1.34220255951763	0.179530326821302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.31711295754176	7.54849433476922
Merged-chr8-117067146-4	25.5394812428494	0	1.3445201577184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22073297-4	20.0902983956064	0	1.33738061780092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123025407-4	24.7863764765054	0	1.33968361421197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101078906-4	20.6160064056634	0	1.33547604305965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103436478-4	9.87002512788816	0	1.35157025843272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103007909-4	69.7591117337152	0	1.33621434520352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82876997-1	3.15606687908986	0	1.42612009257317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46458470-4	77.8092797920953	0	1.33492490884195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98880270-4	45.426497510415	0	1.3342827891143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166650621-4	15.6702948988463	0	1.34309737697815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3960027-4	14.867956185136	0	1.34332137320939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75153390-4	16.9223400320094	0	1.34487171319013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72837159-4	39.6027537354362	0	1.33676135389484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51312239-4	15.9583175497864	0	1.34199439468428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-131916606-4	11.1046040340399	0	1.34643838033292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86579441-4	18.6178444448822	0	1.33864483087449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11458418-4	112.159683129958	0	1.33900399426142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14207863-4	28.6238306826213	0	1.33436695649119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135192070-4	12.8705865887488	0.668336218169292	0.776322941790213	0.860899739260698	0.389293265289596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.88925557974982
Merged-chr17-34296220-8	164.457149393709	0.0440910335078337	0.197219466351256	0.223563293844969	0.823097127996948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.21364188294922	8.25728557587117
Merged-chr4-72379714-4	44.9388353802461	0	1.33995928890562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122387885-2	3.40981770679423	0	1.45092248853894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93243298-4	21.5924803286311	0	1.33612479624309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100814702-4	16.1298684960302	0	1.33960911514408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58978930-4	30.9099314122045	0	1.34103288041731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-74601013-1	2.09933673090761	-1.37649638009283	1.51613318171362	-0.907899382913733	0.363931383684597	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	0.465515277017237
Merged-chr5-92486927-4	46.9398891843905	0	1.34256938289357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54088443-4	11.8232508992402	0	1.3451028632513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79662055-4	16.6422288104569	0	1.34533027644679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-143289088-2	4.21476069874642	0	1.43596387225421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77838074-1	8.74228491058431	0	1.36590109275156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46121094-2	4.385688174476	0	1.45084096302208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184852444-4	31.1347840792106	0	1.34433967302275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22724350-4	35.8225200527287	0	1.33783990325687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21457456-2	3.85386605474445	0	1.39296973700039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192537393-4	19.0698160892412	0	1.34615250168014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26941699-4	48.0833091638658	0	1.3346738414357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96627411-4	23.9045265768133	0	1.33901536528201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68068427-4	22.6551147596443	0	1.33801354235116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137953354-4	16.0974734767256	0	1.33590255681263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39261308-4	24.8804034328029	0	1.33433212559808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126144524-4	22.3191362461133	0	1.33952589084923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19186437-4	36.9516596364726	0	1.34361605232347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7734567-4	23.5147830452817	0	1.36989380959901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169987029-1	5.66696580561451	0	1.37698098605842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34101933-8	66.4344931533973	1.12669775094848	0.272497115771054	4.1347144088494	3.55396316588489e-05	0.0024863562900172	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57676808918595	6.68536737281262
Merged-chr4-88864788-4	15.1641394945836	0	1.33620754187829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171983811-1	8.43023861551327	1.59709244250553	0.963585336938344	1.65744784741128	0.0974289646111415	0.896032327282185	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	2.64879081398623
Merged-chr1-134065497-4	104.553215147253	0	1.33927270250287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24463959-4	20.1425421536693	0	1.33575714557592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82022804-4	23.6485623470714	0	1.3430757387266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19206541-2	4.8274530971972	0	1.49393454311874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51468594-1	2.06277523218718	0	1.5674099843657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97396766-4	29.5273853693723	-0.942331278254772	0.615907248541413	-1.52998893987105	0.126019466615942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1331985207636	1.97656658922368
Merged-chr1-67398251-4	23.2315506911029	0	1.33904225367473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65115068-4	29.6777267911353	0	1.34237963291485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-71365226-2	7.28754770187162	0	1.36686314073095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124903769-4	22.5616790318841	0	1.3369773172188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58759827-2	9.24835706506772	0	1.38763144144633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84407114-4	38.4513062253706	0	1.33779143068937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98066686-4	24.5126316449603	0	1.33966522029649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25267174-4	20.5274048218759	0	1.34189328247629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40956086-4	28.2772430435682	0	1.33246747033692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127477974-4	110.658769449738	0	1.3395432761826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22781590-4	12.5820523831262	0	1.41494225973487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46277504-4	24.3205331338413	-6.52578912716281	0.975531774582361	-6.68946855160775	2.23982510547744e-11	9.89875226899577e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37030144991542	0
Merged-chr17-80112944-6	39.2953583996639	0	1.3422552303548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166623323-4	21.9829976366569	0	1.33585077487813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106345469-4	24.9365263946476	0	1.33511099622546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25541565-4	22.4830280652723	0	1.33508373984382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105558765-4	22.5476808831686	0	1.34841576406225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119055418-4	19.1458527758802	0	1.34248892364424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93889558-4	25.3201487708526	0	1.33909843359673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-44070369-3	15.0979432954335	0	1.34754856733967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146410066-4	15.2153372136789	1.25304949607204	1.30524688609605	0.960009565561856	0.337050400716759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.716426531808663
Merged-chr10-96435310-4	10.9252979037331	0	1.34574438561208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16046576-4	15.7117330752148	0	1.33999209162924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152536672-4	88.8403834191714	0	1.33464878816503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124273410-4	40.3954787532414	0	1.34203191667928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122297832-4	11.408266878443	0	1.35533408109271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122870544-1	2.86452301030714	0	1.42016872451791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116189541-4	29.0097142651769	0	1.33441817847936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73620918-4	27.242341173619	0	1.33829468952181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112798198-2	4.320491299572	0	1.43470717796569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64376613-4	26.8856608673859	0	1.33711906349122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80779714-2	4.1070606125621	0	1.53041829314031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63080390-4	54.4377470560729	0	1.33625663700385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14586292-4	40.7250498151278	0	1.33757643500909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25705930-4	39.9902007836389	0	1.33463438143812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42270878-4	47.3508324839523	0	1.33456087436587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107724387-4	15.0345107754069	0	1.34092826054218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73149817-4	18.2430567519647	0	1.33453218086558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10288726-4	31.5654947247723	0.865327659225212	0.965692500155714	0.896069565711322	0.370215610351247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.25298535761957
Merged-chr2-62656282-4	17.0216918618858	0	1.33924174628768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159557695-4	17.611864725112	0	1.34201540589784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43811183-4	19.9033461489067	0	1.33756031513471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168541408-4	25.627216660992	0	1.34405823849557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47295944-4	20.8230091878927	0	1.35234577829145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25534749-1	2.88301675499395	0	1.62380191168293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101172919-4	26.4203563066516	0	1.33557961019125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8512021-4	14.8043128145594	0	1.34421367122434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44264408-4	20.683612795701	-2.17142950512086	0.786462973620232	-2.76100665632786	0.005762350196298	0.136545594734334	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60391341779232	0.662147012823607
Merged-chr1-173803068-1	1.70410129286297	0	1.66237263043072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32344029-1	3.49347211045837	0	1.41985241429087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3181568-4	23.5845541787531	0	1.34667558908826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19953339-2	3.08389846389301	0	1.50870313352574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75288753-4	14.7140561480083	0	1.34942535154081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-15956576-4	25.0719740221366	0	1.33617714896236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-57707039-4	22.7119315015518	0	1.33955110774232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59604281-8	79.5470938666724	0.251385543229294	0.210137459424644	1.196290960772	0.231583034976376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.99402290851668	6.27419857918331
Merged-chr17-47754394-8	90.4480306314311	0.149516756549358	0.199362593447541	0.749973974373988	0.453270379487088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.43248462476769	6.57682307827563
Merged-chr4-150349858-4	17.9416100773146	0	1.34032045598007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115516798-8	107.3087053474	0.279545419064416	0.210820678682462	1.32598671445066	0.184844098049343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.02731213491409	7.3082501713759
Merged-chr8-115555638-4	17.2438439032236	0	1.35538300857029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21764136-2	4.47231416312523	0	1.40651882950506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57929556-4	28.1600540800129	0	1.34299231686445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75790529-4	13.2501162194012	0	1.34890069632988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-13602-4	459.939676970512	0	1.40241838953101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97479430-8	193.984956404055	0.0433193035516429	0.174856940093875	0.247741402362333	0.804334495755638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.95441431621357	8.00827408906007
Merged-chr11-70683755-4	18.9659437308377	0	1.35720680505042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-117770563-6	61.176337515037	-5.39733437290389	0.765413312279123	-7.05152926702122	1.76961995691058e-12	1.0020288670594e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04317385347765	0.723581231604105
Merged-chr13-49272463-4	28.6298658957944	0	1.33892276402115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78980998-2	2.7916149971309	0	1.50231342213199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32248482-4	11.9001969363899	1.16319328397788	1.10464221237916	1.05300455744182	0.292338903334171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.887876939341704
Merged-chr16-13160434-4	52.7878526425387	0	1.33503935803904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38335073-4	27.3576818929764	0	1.33588307408218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72269720-4	27.519734897297	0	1.33431654027199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38239931-4	12.8600145443889	0	1.34294216615444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4677479-4	60.0536196002361	0	1.33816524734114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95590310-4	32.0981084638371	0	1.33401590502704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99485354-4	25.8964489442905	0	1.34275769192325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5125542-4	17.9213309598936	0	1.33846749699586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40821795-4	17.537742334217	0	1.35879532233366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43966015-8	74.6835375678101	-0.298863679028333	0.204505374741755	-1.46139767429453	0.143906338586781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.68863124520628	6.39628168357866
Merged-chr19-16140826-4	28.5728611506026	0	1.33817235777031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32130358-4	21.1311415975932	0	1.34190968901136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6256422-4	16.7398037725931	0	1.34226895512804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75731277-8	110.342763697085	-0.0863361504927567	0.186014429794954	-0.464136844587412	0.642549705707733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.4899570622203	7.39077235584392
Merged-chr10-128780965-1	7.31929744715261	0	1.38628609933129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20842813-4	18.0962265489927	0	1.33802961619517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59526878-4	22.9330233425245	0	1.34410562889249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31385755-4	16.5511995444127	0	1.33906902052603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-104005476-3	47.2216919662747	0	1.33385774187202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21953042-4	51.3922117046111	0	1.33593709957332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145257519-4	15.3052468539492	0	1.3487074958712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173427574-4	37.1546276565545	0	1.33308672590998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24553629-4	19.7721635318424	0	1.34720459498437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123924832-4	52.4647172973207	0	1.34009908846049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3747782-2	5.06590408451121	0	1.45816601923389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34555710-4	10.9014159341118	0	1.33988634909419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108844511-2	3.34299742047821	0	1.47308443808769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138323288-4	50.0728738955628	0	1.35040447697528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121885062-2	6.63421186850263	0	1.364903491821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117120567-8	121.003696643273	-0.356612577287655	0.210220657551412	-1.69637266594717	0.0898153268613165	0.850273659500924	C57BL6J_F1_Control-BALBCJ_F1_Control	6.9616395553199	6.59549530174375
Merged-chrX-107004774-2	3.37744654821162	0	1.42014982790787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71051292-4	20.4218491762193	0	1.33708497780874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150080514-4	21.808013191447	0	1.33597385430791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60935474-4	32.3944006402996	0	1.33997602990588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83828454-5	32.7622066071493	0	1.33637169005625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-194677981-1	1.4120832288521	0	1.61543159298855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29670229-2	5.3767064268397	0	1.47231299447824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69752857-2	3.61212321129519	0	1.44300807646034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13155503-5	34.0648163208786	0	1.33359340982812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103383735-4	37.7222008095366	0	1.33673483657466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70197844-4	20.8368905970809	0	1.34250954211705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113783845-4	18.7774591683246	0	1.34275945079094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-168653883-1	2.64206407213172	0	1.46147288297921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83136256-1	3.37021726568808	0.881414225856112	1.00305737963483	0.878727621920286	0.379548978164392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9091002533888	2.42529269712342
Merged-chr13-43777545-4	26.439413091181	0	1.33687914619338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104629467-8	100.122654448141	-0.0660034814161446	0.194363095399684	-0.339588548332266	0.73416640327988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.96912806025931	6.87168254301347
Merged-chr7-68708076-1	2.86982328275907	0	1.51268111922622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166739727-2	4.36664724607475	0	1.47842845088186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10801258-4	20.1574481931191	0	1.33626163321467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36218573-1	3.56701821694402	0.621697120474467	1.39546284927807	0.445513200724832	0.655948922186827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr4-101284135-1	2.29832485588582	0	1.45458600213603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68253010-4	16.6422887358797	0	1.34210096360039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145803045-4	65.7847466370922	0	1.33894295890182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11886536-4	32.3579719485505	0	1.33639015171741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121446445-4	24.1927478621496	0	1.3403426984218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45837867-1	3.81524134243125	0	1.38466091320519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38572725-2	5.52649071326315	0	1.45517273653925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88417879-4	24.997337144103	0	1.33800753070947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37337486-4	39.1728438517968	0	1.33584434053372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101687965-4	24.173505983856	0	1.34489474093643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53196172-4	16.2890655112739	0	1.34137468539784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24936045-4	13.8852086414905	0	1.3447844152504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158136493-3	35.8278233242753	0	1.3466526460732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93009316-1	1.92786160854421	0	1.56748470160416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113378491-4	18.114930641338	0	1.33983978415469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146620969-2	6.4757501128318	-1.10129137466644	1.09206165611595	-1.0084516460209	0.313237689881778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.577068348605183
Merged-chr4-147922359-4	17.594637377691	0	1.34462299201257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80080629-4	43.9957758291109	0	1.33363348751075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130796679-4	12.6294049119392	0	1.3435429207138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30876230-4	15.3064188865798	0	1.34788429594068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8806026-4	25.8284031620583	0	1.33820993491931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84246396-4	14.133489925125	0	1.34176068532438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8888533-4	32.5881427454394	0	1.33676984113041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88828204-4	58.1903472493549	0	1.33370846362464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31239308-4	20.7760672088154	0	1.33753159205501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8687391-4	37.0648355958807	0	1.33720684961429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120716209-4	45.563729643849	0	1.33538601149498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164359899-4	12.7073047541409	0	1.35117978182896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52922531-2	2.96858771996029	0	1.51961099659365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-141004416-7	37.2512021255737	0	1.3348709845655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12436347-4	40.7330591231468	0	1.33525559694058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-69439905-4	19.4050884298353	0	1.34159177942356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12294559-4	18.8485878691572	0	1.33798306708298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34057406-4	39.0915762400169	2.32235409848954	0.407641078301265	5.69705611654088	1.2189381585617e-08	2.73802724633286e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64775197177295	5.36427131828807
Merged-chr3-38382952-2	5.69303988798419	0	1.56176391388143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83858158-4	21.2544294454087	0	1.33906452055118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35625879-4	18.2476216089809	2.79313144056378	0.976499367135914	2.86035151129291	0.00423171672502214	0.109335051485611	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.9114301050144
Merged-chr7-120835096-4	20.3144377861599	0	1.3425165899575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96098767-4	16.0252586859644	1.23516812931993	1.3042258483739	0.94705079711457	0.343612895073338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr8-106577356-4	15.2398883062534	0	1.34176846340233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44539016-2	3.24198480635591	0	1.44817353083674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75717991-2	3.91633760239053	0	1.89184223207795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143629893-1	3.07987950361668	0	1.42750506800101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136239859-4	15.7237284441875	0.648357970162262	1.01099266997241	0.641308279890849	0.521322410762322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.32509503823899
Merged-chr16-91717157-4	13.6787385039658	0	1.34215654908829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116459248-4	40.1232610008709	0	1.33911745183706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41460120-4	15.4912339721513	0	1.34341052576865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32496327-4	21.0391782332588	0	1.34281113496356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167800250-4	13.206086792563	0	1.34658347777174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37028875-6	37.2479995260258	0	1.33648819243877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110071263-4	15.0739955287476	0	1.33822894218295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20185266-4	20.6281093007934	0.575696252971276	0.466253089328349	1.23472909059023	0.216931345431149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63709836799149	4.08090941865153
Merged-chr6-115901269-4	28.9112628027607	0	1.33650656220014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102724155-1	3.01946767315977	0	1.42381382368095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58459030-4	25.9745674980933	0	1.33990878892347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40873451-4	23.0757724885955	0	1.34330071304364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46595815-4	32.8594145155002	0	1.33365160911659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104408011-8	61.6948192099474	0.360817588973364	0.276143018433635	1.30663303030447	0.191337373128557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74801646403122	6.13810559364806
Merged-chr15-6751289-1	1.81202528198921	0	1.54208068127892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9460630-4	53.9103990894712	0	1.33615582553421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88603904-4	28.2954200834011	0	1.34552649684161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37364704-4	16.612943538636	0	1.33893001741847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58374372-2	3.52178365646098	0	2.28982646450024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86407164-4	22.180189058779	0	1.3462494229245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85478369-1	4.42811860319399	0	1.452869849561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18060027-1	1.7046186450455	0	1.54710304832677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39427485-4	18.667137367384	-3.65927344715955	0.698655832567436	-5.23759092329105	1.62686158973608e-07	2.62527961812503e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89359825128636	1.27992882773773
Merged-chrUn_JH584304-22491-1	4.19231985243633	0	1.65954016406946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155050344-4	57.912579703611	0	1.33967672667813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165616831-2	7.63010193649651	0	1.42486306063587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114783910-4	29.3894076009401	0	1.36345009600575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84995277-4	23.521923929655	0	1.34014304558276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80939852-4	28.5659518892839	0	1.34493234525878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4302412-4	25.3946448316174	0	1.33532188289343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32186637-4	25.5317955724232	0	1.34329326284986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78135177-4	37.0318882303655	0	1.36102469871296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58261811-4	53.0290398780269	0	1.33735812321224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101128016-2	3.94515391538419	0	1.46639858806581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18616267-1	3.18414540628025	0	1.41317392557328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23873451-4	38.5703039760891	0	1.3393158563354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64511122-4	18.515642664272	0	1.34565196452145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44529526-4	19.9051757460673	0	1.33792618803658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95548330-4	25.3811567097532	0	1.34116535672302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117914102-4	13.2929824434708	0	1.34580620863539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26799071-4	31.9526054636554	0	1.33694342874547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135909680-4	24.4149990901137	0	1.34062654901942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38535500-4	34.3967867296546	0	1.33773246808556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96130318-4	24.2188730632001	0	1.3388522319363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180302900-4	45.8611984278988	0	1.34115813149306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-36038963-4	24.3260752518759	0	1.34619615093014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102456635-8	58.2027353445917	-0.11452708980858	0.21602898521176	-0.530146867543335	0.596010106279998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.31533654280702	6.25530913831016
Merged-chr6-137565550-1	1.75199660568894	0	1.64049167153246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78236996-4	32.6438987773301	0	1.33480406557486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69181438-4	55.9904594819392	0	1.3388495163837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70824659-4	22.0904048608144	0	1.33846377589662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63031591-4	14.9790715653924	0	1.33988007630667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44089491-4	32.608276164279	0	1.33838575632507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36278976-4	33.6243552071594	0	1.33499935840018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141558731-4	13.5722029152079	0	1.35482702514675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125324677-4	17.604849456636	0	1.34186963549949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39527464-4	27.558937073321	0	1.33695384699837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78808441-2	3.03667556564425	0	1.50809762451228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46693469-1	9.55987246340844	1.73060043862173	1.20106277264542	1.440890915976	0.149615502831805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.0754104773304
Merged-chrX-100508342-4	22.9081594140989	0	1.33964368534968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116679795-4	35.799479673004	0	1.34121253883026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30658605-4	28.9297550714407	0	1.34648998927329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23134649-1	5.5002065137165	0	1.3590129455097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72262155-4	32.3621781251744	0	1.33351898299044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108760721-4	14.4364145723368	0	1.34264597933723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126607255-2	4.54544375634213	0	1.48931154647362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117198300-4	62.4075155488611	0	1.33752509972076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70791804-4	21.9337437338346	0	1.34583870264711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167761780-4	45.9568160058546	0	1.33527182848437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115328761-4	16.0146710414551	0	1.33725483799075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79287664-4	17.5017802060072	0	1.34270966744265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-120028369-2	7.36688633646805	0	1.36052392968095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10279832-4	53.6885237959229	0	1.33674455042466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64279737-4	33.9114661680648	0	1.33700321163943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-61065993-1	3.03753178695261	0	1.49640130092986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132019421-4	15.0439943141994	0	1.34151696021758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112894731-2	5.35609383776073	0	1.37792516600939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67890068-10	77.8715327253705	-0.521813110713309	0.248846754102315	-2.0969255258952	0.0360001685085704	0.475492124377258	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0096745449027	5.5343498753409
Merged-chr16-30395338-4	14.0496680463699	0	1.34047991076598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13298979-4	15.4605046420604	0	1.33877109162932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25711961-4	33.932379030594	0	1.34479198343368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115692206-4	20.8938723835114	0	1.33817831510117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141467689-1	3.26376427236198	2.77110904046317	1.25953673577794	2.20010180072408	0.0277996731572741	0.403191684406688	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr8-76991844-1	2.04607431378352	0	1.60391449589019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112760841-4	13.3687766039935	0	1.35893687757156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52800462-8	112.830242649613	0.153592850019699	0.168420072381924	0.911962854827649	0.361788271707012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.0124438161178	7.16405221615981
Merged-chr2-3668893-4	33.7813872285933	0	1.33909142346033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53825103-4	25.6141868088505	0	1.33720881706434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167352729-4	28.919113438657	0	1.3399668508067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130796134-4	16.6856110907797	0	1.34488432727363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75011195-4	17.9082058708259	0	1.33870842436805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62846970-5	28.8898399274851	0.0438887367949036	0.538371880223692	0.0815212279970267	0.935027443561889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91991443973346	2.92222718070722
Merged-chr2-68793755-4	14.3633264698596	0	1.36829790488557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97825188-4	33.4263436171915	0	1.34298603408761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41006961-8	89.1858320004209	-0.380181619567325	0.200509784979474	-1.89607514469303	0.0579501087210148	0.652553011428279	C57BL6J_F1_Control-BALBCJ_F1_Control	6.7258818476928	6.35660469429289
Merged-chr18-37880356-4	16.5668189360442	0	1.34318700943425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72270160-1	2.53169172197402	0	1.4293302306811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120353828-4	43.9353806758872	0	1.34077465214937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19933619-4	29.1818233351958	0	1.34005694192686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113378069-4	36.0099497315445	0	1.33523972130254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63424268-4	13.6629780608666	0	1.35192980016445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120570445-4	34.5577368939617	0	1.33668161056042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61965713-4	21.5803955922996	0	1.33683953470187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44380682-4	56.5007293860734	0	1.33613949508817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76228150-4	15.8360931018612	0	1.35376701090927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6746247-4	38.0439426959172	0	1.33667259965031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17498959-1	2.80457364368717	0	1.75332164886137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113722192-4	15.5895303242293	0	1.33576230999452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121488845-8	130.338301085826	-0.556979094771858	0.195777026280901	-2.84496656912493	0.00444160844289156	0.112875826716756	C57BL6J_F1_Control-BALBCJ_F1_Control	7.40667577343466	6.88226270668725
Merged-chr15-95804425-4	25.8836808283723	0	1.33407466181939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91984728-4	34.4890245469286	0	1.33522005421583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83273886-8	80.9230616039336	0.275327630993218	0.238218505743086	1.15577767619008	0.247772106455601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61986129968572	5.87373592186259
Merged-chr7-30216976-8	53.511368301175	0.593222741844738	0.224048126358213	2.64774694386991	0.00810301551088279	0.174308368831057	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92480806542925	6.60397874785578
Merged-chr10-60745091-4	9.98257424969773	0	1.36031821866014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87743480-4	15.5856791960669	0	1.34848886127615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111732650-4	13.005227395187	0	1.34040637513983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59815611-4	22.3078741360381	1.88988284104991	0.651859252435587	2.89921917037859	0.00374093295980514	0.100109854610795	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	3.02704875970166
Merged-chr5-151333257-4	28.4014792265215	0	1.33384936788298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99942709-4	17.9675313371875	0	1.3419208346437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44981817-4	34.0408959344035	0	1.34138099632669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100839403-4	22.9748929373501	0	1.33556293254048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59554373-4	20.8546170204176	0	1.35284901987205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44355788-1	1.61765034965124	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60288805-4	17.3923801566081	0	1.33709872277785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144319600-4	37.3214640872389	0	1.33590885195224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113601301-4	54.0591441863551	0	1.3420300270724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32904754-1	2.23455693164437	0	1.51972189758755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-146968173-4	27.53118670606	0	1.34163905227833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72407360-4	19.8240000739442	0	1.34335107902386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170221142-3	9.9882739392476	0	1.34419499830131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37439475-1	4.43825083346263	-0.688991739175411	1.4323855359975	-0.481009980804928	0.630509405146906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr4-53384941-4	20.8466996573714	0	1.34707047735619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97337110-2	10.9788663261263	0	1.35788042609209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23885106-2	37.8911403911659	0	1.34357759142321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110797904-1	3.65235509962569	0	1.48669546502523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68739193-4	19.0990793493535	0	1.33563573434603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117910645-8	66.8818249677998	-0.487717994421524	0.22989528948505	-2.12147885027997	0.0338815259187574	0.458378762423528	C57BL6J_F1_Control-BALBCJ_F1_Control	6.36406365346255	5.87148817060482
Merged-chr10-60934488-4	45.0596947995053	0	1.33428842677787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90197889-2	17.4434630954616	0	1.33677329013588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3369524-4	9.29555420003519	0	1.3605849415066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-47391645-4	16.8367466298926	0	1.33845901623118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60350946-4	16.506394183652	0	1.34101680239106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-4600-1	1.84414072922023	0	2.15752833674528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120453262-4	19.6094368496648	0	1.34985940277067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144417790-1	2.4547565145939	0	1.57132466196497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122587461-2	2.93937534020036	0	1.47519928123335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23657962-4	26.2201530232937	0	1.33498030399313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156257365-4	22.787884450029	-1.23008220568636	0.760075478876006	-1.61836849085751	0.105583208299339	0.943468953980045	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94640134381309	0.94927122251658
Merged-chr12-100026892-4	18.9645655955244	0	1.33937471923333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31111666-4	32.0919027963499	0	1.35222817563819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13162321-4	16.768047987614	0	1.34934391807209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50836154-2	4.73921804712398	0	1.40176817909045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38441769-1	5.60345403248785	-0.0382331204169073	1.18506352847961	-0.0322625070285969	0.974262708686178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr4-59083617-4	12.3951668415786	0	1.34824487443844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127599635-4	28.1848734116829	0	1.33723010688572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22302542-4	25.47249485751	0	1.33606129745741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53475758-1	2.48916152984098	0	1.46147700712331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3169122-1	4.2672674550987	0	1.45806078198892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106027805-1	3.23964878634036	0	1.47211426367054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49500953-4	11.8389511268176	0	1.34507221342739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160152307-4	39.0014100112249	0	1.33318592438587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-89177751-4	44.5606963475173	0	1.33488351702319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55457221-2	2.95016210427636	0	1.56431647082939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102982990-4	20.4728485499216	0	1.35291447427024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136673524-4	17.4010888125313	0	1.34209164292739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34254882-4	38.7141735138004	0	1.33875845649907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9429827-1	2.84231904985671	-0.687414372555223	1.44644269593822	-0.475244801944497	0.634612497231062	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr5-122318322-4	15.2292167040849	0	1.34761114259427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55776517-4	40.6684721114495	0	1.36612472318904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-59557268-1	3.3554483324218	0	1.38342835603103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90227679-4	16.1519044108648	0	1.34129299578377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34515900-4	68.7330165642395	0	1.33522396565067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91355393-4	60.8104336043872	0	1.33835984689833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176826327-8	91.7089676660122	0.503219359455005	0.21446759141577	2.34636550974015	0.0189575064796529	0.309369887339373	C57BL6J_F1_Control-BALBCJ_F1_Control	6.33262235929281	6.84269239322077
Merged-chr1-77832391-4	48.6485684296573	0	1.33592697804227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108342475-4	55.3240377879657	0	1.33799227744702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8762933-8	108.849437758333	0.425984602915631	0.211555316054918	2.01358496141524	0.0440531266421303	0.5419062935369	C57BL6J_F1_Control-BALBCJ_F1_Control	6.58369587785748	7.02102329989241
Merged-chr11-101979586-4	15.0736585019473	0	1.34428719229276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126494592-4	40.1268137859654	0	1.33633528956625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76224832-4	34.0464467484444	0	1.3439141707378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7714620-4	25.962201130782	0	1.34212122091665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101827798-2	4.41328692444334	1.27654988531091	1.36672506322397	0.934020981732533	0.350293069999465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr1-131038258-4	27.2908272955402	0	1.3507708857596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68183946-4	21.2354829004263	0	1.34466770969807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124649208-4	14.2288412591943	0	1.34259748528203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23754471-4	22.1122677261495	0	1.35850528472786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50936769-5	13.4534579265994	0	1.34221365688567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118682814-1	1.88555451669813	0	1.44685419755032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24792576-4	28.287610571331	0	1.33549542262935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89570685-4	25.7778741905004	0	1.34234671148931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66059009-2	6.25188040760727	0	1.52734290084492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99199496-2	3.35916339734152	0	1.63420563271787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110003193-4	26.2321273038608	0	1.33429899466009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4312253-1	3.40947024678069	0	1.46197348668271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158156663-4	11.9286121632549	0	1.34840498889985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46395536-4	20.3500142966805	0	1.33583616695552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12089778-4	11.0237257447886	0	1.34169042156463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45048839-4	22.0207732995267	0	1.33666526228111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58469683-2	10.7237402994061	0	1.44341362852759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21152270-2	4.63942777148631	0	1.40119543534813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9644435-4	19.8888648337643	0	1.33565512939833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166345784-4	29.8278990918212	0	1.33428065231643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6455303-2	6.26487182832414	0	1.39505986467914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46366001-4	16.9441052194178	0	1.34119076361135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23135068-4	41.0148020444531	0	1.34061633390073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155070642-4	22.2045764578093	0	1.33853280607876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25010502-1	5.24675055050766	1.46664308962883	0.989671027614799	1.48195011140579	0.138353569877134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	2.34695791138986
Merged-chr11-82567525-4	14.8742940029647	0	1.34119077761096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46745900-4	20.0982038118449	0	1.34706887999324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84748338-4	25.6260300701913	0	1.33855352098681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40576502-4	22.4059333142219	0	1.33753218297201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64754383-7	72.7286646414317	0	1.33374355098964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131976109-4	15.5083645252386	-0.0372345119374409	0.698969197555298	-0.0532706048673842	0.957516300852834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52572753666912	1.51118621810175
Merged-chr9-56103811-2	4.93932297435585	0	1.41962104000852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76203137-4	22.8110947764274	0	1.34581726481731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5211064-4	20.3043220717199	0	1.33906276112119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-5860675-4	52.3970887764821	0	1.38582735155837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21813431-4	14.0389272102527	0	1.33949485262381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180888837-4	28.3706333954866	0	1.34118597712365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10436439-4	26.1238489825471	0	1.33613991649426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90504972-4	69.6463365466966	0	1.33811735068688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122219214-4	26.0156957547535	0	1.35242133931016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-18956854-1	2.47808915777277	0	1.49389418911561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6383653-4	76.3151150981086	0	1.33838111337462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53266537-4	63.0447729489614	0	1.33852926779495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122054636-4	46.0034015366128	0	1.33711080061962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49792675-4	27.9489547344187	0	1.34270907935576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33751747-4	39.351185356022	0	1.33309574660748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146568014-2	12.5230471237258	0	1.43052735228866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5824852-4	13.2890944504969	0	1.35170019739337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96628532-2	7.64996529795679	0	1.70473392181467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79132345-4	42.3276105742143	0	1.34054401387955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110372788-4	15.4253971275664	0	1.33875758502314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105169121-1	3.09445990708217	0.615433860154539	1.45849699200704	0.421964435667186	0.673050976423739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr19-29419640-4	19.3409774214983	0	1.34011397403303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44715429-2	3.49595078435926	0	1.58003924443839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4839804-4	28.3250633608156	0	1.34721254201783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32856997-4	32.3467716593263	0	1.34288293711442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165672679-4	38.6780106118209	0	1.33906453748141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10946185-4	25.6644504763523	0	1.3367911427471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128310612-2	6.63826280163342	0	1.40926610995326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34838500-4	16.0407122490609	0	1.34329086155066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34063878-4	30.2111187482769	0	1.34028459922782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50299233-4	11.3027640265468	0	1.34558698250008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24640493-4	13.9410956911639	0	1.34524222995806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30530909-2	3.80127924006376	0	1.42360898440655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99449840-4	11.4763062055281	0	1.35293948875126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27665797-4	32.4644713056345	0	1.34173676929532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31410189-4	21.2351420875082	0	1.33588463204502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100089471-3	41.8821728512557	0	1.33987366532723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44977329-2	7.35625851521078	0	1.42367547931015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8667333-4	34.6769228696048	0	1.33918663853859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62372602-2	4.79786976732116	0	1.49641513482207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66048974-1	2.0388084164705	0	1.5202133353281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36135949-3	10.3704307542892	0	1.36700170157833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121574606-4	13.166403723066	0	1.34570545385177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49930344-4	10.345917120704	0	1.34399021304436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66475877-4	33.2874753672362	0	1.34425666543505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127323798-2	3.95632669908136	0	1.4560060138197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4154466-1	2.35566233480601	0	1.53522561860077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32224538-4	16.1764513098445	0	1.36770525321409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98944098-2	8.84489743485276	0	1.44214613097034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96302842-4	28.5680478290765	0	1.34270803695861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113615181-4	29.2008095886793	0	1.34433385415016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122575903-4	19.2747837536622	0	1.34794625438814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121546165-4	19.9474771738736	0	1.34620740490387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109773314-2	6.678116250849	0	1.40843894557414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86772528-4	43.1668698704339	0	1.3322463679387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-54117991-4	59.2452983685114	0	1.33362817240591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141550567-2	13.81690454328	0	1.35876138514693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80313082-4	32.1167754412169	0	1.33675871108557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120244882-2	5.12806874645518	0	1.36836365155118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53118597-2	3.44152191506705	0	1.52089876016552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91736422-4	26.1992723206314	0	1.33864869269726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19691957-4	57.6390937142474	0	1.33799139926668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28929359-2	9.217450736028	0	1.76604748524376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31078600-4	26.5081468487021	0	1.33681171692122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170343332-4	18.2289194638194	0	1.34437311353423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28444809-4	30.9211036344272	0	1.33863976886729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54719141-4	14.8748641137274	0	1.3383099088554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36598476-4	18.8051741638965	0	1.33711414243967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58916733-4	30.6469755207028	0	1.3450134102756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78589079-4	64.0550879081305	0	1.33847660198364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114805225-4	61.9882839817227	0	1.33803673894166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111980468-8	84.845628475876	-0.637854773988467	0.210030647346741	-3.03696047241824	0.00238976791312111	0.0713290584396829	C57BL6J_F1_Control-BALBCJ_F1_Control	6.72010417378124	6.0871899688425
Merged-chr12-11272740-1	1.57921802238845	-0.674621081867539	1.55330516738689	-0.434313292733356	0.664060952333475	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr15-6391378-1	2.78683208379439	0	1.39132594249869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17468590-1	1.36876255182752	0	1.88476141253496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-123244387-4	21.4906012222625	0	1.34253025299349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3699469-4	20.5144253275677	0	1.33894891245375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170136590-4	13.5289946623442	0	1.35023257970783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102445621-4	50.8082594616833	0	1.33625723887537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120155627-4	22.8342254542589	0	1.33725249241433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37620665-3	11.9746157869228	0	1.35847169553459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170147841-4	19.5134451673644	-0.288407436233059	0.622374498399964	-0.463398543761856	0.643078722278833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47044523122567	2.51843726321327
Merged-chr6-29803170-1	3.00423820363531	0	1.48363154465329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129209997-2	5.2260327542563	0	1.40252623870441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44383151-4	26.9512010853494	0	1.33512988314139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98918428-4	32.4597829937039	0	1.33646405638531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43925833-4	34.1647382250717	0	1.34380114617294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134548347-8	77.3448058072391	0.216579924060021	0.25299832162272	0.856052809642717	0.391968569424074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61619137692536	5.817142237642
Merged-chr1-60627611-4	19.9352231452799	0	1.33929160009635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52000271-4	25.4322070133576	0	1.34457233507883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56507293-4	20.4700165235731	0	1.34146862426342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130800741-4	28.67905140142	0	1.33595420274237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130900284-4	22.8826251711127	0	1.36853855439988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61295022-4	20.3825302430655	0	1.33811579551352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113433680-4	25.7097496808459	0	1.33811898142843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101362918-4	54.5442299483987	0	1.34033900547876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102887661-4	16.1504589270089	3.68167088127228	1.06550703251677	3.45532292975676	0.000549634082757337	0.0231033364636821	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.34502298933502
Merged-chr5-21717386-4	11.3833328296136	0	1.3527868367714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-101097783-2	4.15204405179397	0	1.45127340727996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139015214-4	43.7304530874128	0	1.33939532949934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5935957-1	3.93175170901409	0	1.3878387511134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191193807-4	32.6327802605791	0	1.34861616027431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30638321-4	29.8116326663054	0	1.33799803887098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6299668-4	53.3205145613636	0	1.34509800174673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123931973-6	61.6647298668094	0	1.33799543550665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136831891-8	55.3538007116849	0.305407463658434	0.270076415758878	1.13081870847656	0.258131403952699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.02358808673834	6.27800755846939
Merged-chr1-134093604-1	8.55232154671099	0	1.35788490289123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11391061-2	3.81323947501447	0	1.53901629348667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34012141-4	25.0212931933798	0	1.34287943818339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12926606-1	2.62134903953205	0	1.41768874105885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11939830-1	4.1994575961049	0	1.43947553653451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66437983-4	32.79448502663	0	1.33952331062751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47459055-4	21.9518915917053	0.333198759883599	1.03114670170779	0.323134195485235	0.746593613965766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.02674429890598
Merged-chr10-99467578-8	20.9042567820927	0	1.34080208092421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65294435-4	12.8658147343338	0	1.34623756946855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5020937-1	2.46522178576807	0	1.50054466048863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43614379-4	14.7396714375013	0	1.35433684470401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98871356-4	24.5424743799442	0	1.33494324933287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17764537-4	24.930235983905	0	1.33889932616078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21804508-4	16.0738651447247	0	1.35142921837193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45697603-4	15.7955146190816	0	1.34273338636819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115692981-4	40.2668644310597	0	1.33547577665374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191732868-1	3.71094055541242	0	1.45701047993207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34872037-4	22.2987791948169	0	1.33876002873945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64928104-4	21.7246355474397	0	1.33587937056976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4853738-1	1.35730509334005	0	1.68654492156593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59784467-4	27.9157746963284	0	1.33731648406673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114965633-8	173.297541728445	-0.371905764177736	0.171909126342088	-2.16338580790451	0.0305115182176594	0.427909086376096	C57BL6J_F1_Control-BALBCJ_F1_Control	8.13627520081627	7.77581408647566
Merged-chr18-30507198-4	23.1659067007129	0	1.34491413420501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119001168-3	38.1026515584265	0	1.3367135793599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62553693-4	38.6556424977087	0	1.33353343752497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122635538-8	72.7982804424078	0.152175784442592	0.230168504325055	0.661149469119731	0.50851646317358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.97933405563844	6.17516537009236
Merged-chr7-118382152-4	11.1823639311094	0	1.34111692368397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39447987-4	22.3606951561977	0	1.34703117236987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101694688-4	20.9358061005991	0	1.34242724515127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45912056-4	16.5175307295525	-1.16545865019642	1.23739144713846	-0.941867387956829	0.346260538618263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.303163067301871
Merged-chr14-68611000-2	4.79033152112476	0	1.43238533393234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36342092-4	11.2116441737764	0	1.35579779139553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115612325-4	30.8771570041715	0	1.33690015120544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140617903-4	67.702254315822	0	1.33854510912246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12412285-4	76.8186689541379	0	1.34119197544678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-49419-1	4.85876814880879	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51454583-4	20.131297387288	0	1.34523439317068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46606118-1	2.32082151591606	0	1.51874899681707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99398561-1	2.82072583093252	-0.435577928628653	1.02925380750174	-0.423197782173779	0.672150964790184	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5668077711644	1.74544410475497
Merged-chr12-111071943-4	27.9599793180118	0	1.33335164597052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50690276-4	24.7607437699415	0	1.34282662835094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118554888-1	2.9256142991992	0	1.45723752326192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117991929-4	43.4558118080033	0	1.33534808874691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104992878-4	19.8733586747674	0	1.34047393983081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36675517-4	10.5692884586443	0	1.34583173691084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108749209-1	3.88208745214306	-0.0357242176992327	1.38444117408395	-0.0258040705289415	0.979413615118692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr5-29993797-4	14.1536662673713	0	1.34833693181821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38950043-4	19.5337634699256	0	1.34430946967564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55289112-2	6.06428181593079	0	1.40442905628775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43511752-8	103.030172729625	-0.559550420053753	0.192805243624446	-2.90215353864373	0.00370606849497125	0.09948551966328	C57BL6J_F1_Control-BALBCJ_F1_Control	7.28576222081402	6.75233348895688
Merged-chr9-40622283-1	4.97202318274542	-2.58661735517595	0.970884307255155	-2.66418700544119	0.00771746471411667	0.167939817611957	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45893158977142	1.36657423908294
Merged-chr18-77055021-2	9.20631259258829	0	1.41984737509977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127850310-4	37.1811617001179	0	1.34303684496793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143853632-2	4.27131779591994	0	1.37980585100638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19851566-2	4.01086156552825	0	1.43526134229575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19628731-4	64.1157315668503	0	1.33960905282597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73162110-4	14.325985520026	0	1.34081502305335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46987806-1	2.38296703989611	0	1.45262432602527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16252900-4	17.4529489480233	0	1.33748510795832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-143278500-1	1.56168916259173	0	1.74548079367198	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22864877-4	15.5406772183474	0	1.34593953339071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55859679-4	16.5775446566333	0	1.34934051530747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107339603-4	16.4712083056463	0	1.3395313468173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63408921-4	19.6191403786528	0	1.34056102424994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128747541-4	22.2098720984659	-2.25569519667905	0.497104543877905	-4.5376676283874	5.68798138238924e-06	0.000556102481951973	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48059845332638	2.69879804981808
Merged-chr12-85051373-1	2.24485820713537	0	1.54119888818596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13463278-4	18.6702255448274	0	1.34458205453546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21738603-2	6.56703777227784	0	1.40699706876769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25052116-4	22.0795338287266	0	1.33462450839353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16169056-4	16.1679942735368	0	1.34895258941961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95662093-4	15.2137495623452	0	1.34857713401037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128680784-4	29.9156058863707	0	1.34369227850728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60714935-4	18.3027523463387	0	1.3355672105744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37259255-4	14.785573109923	0	1.34546222133088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137871631-8	180.881804897477	-0.635201239237942	0.129560740539258	-4.90272930360004	9.45141868809027e-07	0.000121172091619316	C57BL6J_F1_Control-BALBCJ_F1_Control	8.20804246665375	7.57635100581106
Merged-chr3-146142690-2	4.2426364751364	0	1.42753173699869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74792521-2	9.77883666435059	0	1.35923407813266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159145402-4	14.0415620589295	0	1.34426549035072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116047529-2	4.7782478969828	0	1.40749476109618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139702422-4	28.6155990314623	0	1.33941009058389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21913508-4	20.3182911557229	0	1.3563533477806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10817611-2	4.80208293948406	0	1.42040530063371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59759820-4	28.6132308423229	0	1.34157022889313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66729656-4	14.2009790113057	0	1.35290760998399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83309086-4	47.249294923156	0	1.33677175941249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-59189780-3	8.50229309311784	0	1.36300737497561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21819825-2	5.69293941541993	0	1.45022573328125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99183473-4	52.8825780236146	0	1.33686085695275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6951604-4	34.5265718976326	0	1.33731122687143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120516757-5	80.9063782067315	0	1.33546966287904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41179251-8	78.5713334981689	-1.27126037409038	0.25769335960749	-4.93322907515632	8.08812028356017e-07	0.000107496853421527	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56697859910734	5.33670278042259
Merged-chr1-151608015-1	1.57338329563255	0	1.63300535932845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12461380-1	2.29387550290688	0	1.4753845535429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103329887-1	2.67646441932646	0	1.4985651091811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58927778-1	1.90413335913712	0	1.52665241676194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6565332-4	37.1608289800953	0	1.33446222991307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87025584-4	15.8355989590436	0	1.36680477502856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46842848-4	22.7633730391169	0	1.33627932398473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107612907-8	79.6436612792884	-0.379807887757314	0.290614394600875	-1.3069135418393	0.191242076418739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6204778683693	5.27206150806163
Merged-chr10-98958947-4	16.7131410327379	0	1.34694640748875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74397492-4	72.4250653587077	0	1.33970295162518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86894618-4	65.2415034784315	0	1.33840206097514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45019596-4	46.8699253403838	0	1.33150235343645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14808245-2	4.24051550734164	0	1.47039208179765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16798469-4	20.4032640805271	0	1.34470646600597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21818231-4	15.0628895204051	0	1.34800658484192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3157958-3	30.0029141245933	-1.84268778742633	1.2354725168969	-1.49148423961268	0.135834405990454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr19-56703872-4	38.384122853041	0	1.3401766517385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-90237341-1	5.06223296947777	2.27993593454204	1.01369065965699	2.24914367398188	0.0245033566840658	0.369334439398067	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	3.60386109492877
Merged-chr2-118008209-4	57.4241163144011	-0.551356302502506	0.567430609127879	-0.971671766790869	0.331213866770316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93460027930195	2.18893016279325
Merged-chr7-139377589-4	26.0288986254735	0	1.33634309158511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148336368-4	11.9946182323461	3.06219395621396	1.12090417508491	2.73189628897759	0.0062970959794684	0.144553986633413	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.46494528794689
Merged-chr2-131530743-4	10.2980838956607	0	1.34861021498651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82783090-4	12.6897497606255	0	1.34958019508356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144698148-4	31.021415195984	0	1.33631594322375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21246061-4	16.5848924853435	0	1.33881782215559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44691753-4	38.4352232709099	0	1.33609894653033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115480913-4	17.8972976279884	0	1.33894475403912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129398454-4	13.2431112381565	0	1.34540723862626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47550308-1	4.74879289485367	0.526527877105169	1.43094621274117	0.367957839656693	0.712904671155516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.465515277017237
Merged-chr5-74126685-4	31.3562842096121	1.68395371347996	1.02855724718544	1.63719979426324	0.101588730031226	0.920223592029234	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.70054887545773
Merged-chr1-58727186-4	30.7733276998708	0	1.35173255627376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108369396-4	28.9290404805615	0	1.3331602323517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-20894345-4	20.9497351626223	0	1.35441349268923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114752977-4	82.0079505232543	0	1.34049620364226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31938973-4	17.8083814590717	0	1.33590291266926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72933153-4	38.0212548008066	0	1.33450526011785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104157754-2	11.2393628908574	-1.5480982895358	0.950243684607263	-1.62915925105635	0.103279310776082	0.930403600283911	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	1.09266895777963
Merged-chr14-14643748-2	4.34974028976722	0	1.40012698435247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97934039-4	26.2976577576402	0	1.34386697127847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44420018-4	12.0850343195624	0	1.34994835076953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80237051-4	13.4734954787221	0	1.35226365132153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82802502-8	59.1166019965312	0.389625618028368	0.252324760921718	1.54414341503824	0.122553593282562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61575094626401	5.9994811428502
Merged-chr17-13684009-8	100.870734279699	0.0125467919592094	0.192888940603437	0.0650467150680476	0.948136805737776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.74890924838291	6.75558412777146
Merged-chr2-145824944-4	20.1688922692145	0	1.33552276897146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29624939-4	24.9507494380996	0	1.34609971694561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92465701-4	35.4468887043717	0	1.34056766908514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44692138-2	8.4869564773303	0	1.36561978036225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83640359-4	31.244478397812	0	1.3374918750995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40845682-4	20.8267771872189	0	1.35940279920956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103059818-4	18.3595384034099	0	1.35484706740442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117328740-4	15.4083877910352	0	1.3528962550355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-134693340-4	13.3073574514917	0	1.3416570593591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116137017-4	19.2994520987601	-0.698737980030382	1.34055455117442	-0.521230545536724	0.602206177844546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr10-75330675-1	2.07303522180634	0	2.14851456934564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65975550-4	22.3985658691654	0	1.33943521617397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19417843-4	30.6937239450382	0	1.36906587401887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43973682-4	59.9852409762824	0	1.33857109411866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77897417-3	9.78869647342398	0	1.36185909130895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3871044-4	19.2189271944081	0	1.34516901715695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155062206-3	9.95157209064236	0	1.3554744427708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73435061-4	47.1180550287063	0	1.33404187231498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85947371-4	31.5692658618596	0	1.33506571650881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50109027-2	12.5129925727391	3.19287992297082	0.840890805138839	3.797020853907	0.000146445473858527	0.00802482813858433	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	4.06423564376888
Merged-chr11-87423051-4	27.3437775381682	0	1.34673966590046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62538968-2	6.06639429844524	0	1.51824839106269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84956546-4	28.5615482719418	0	1.33964884141557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-48567-1	4.4643506419856	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80158508-4	33.4261236127212	0	1.34109997233875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34172313-1	2.2352768107526	0	1.54890712526252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81704937-4	16.2043023984968	0	1.34983602271666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108999297-4	17.5712911720866	0	1.33637118778863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65883602-4	13.0273872356222	0	1.34855430734028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55726406-4	15.6891947605723	0	1.33977837341187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90279212-4	13.3287194096553	0	1.35020113552635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-19973650-4	14.5017715247544	0	1.34430701248109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70688444-2	3.79232240050034	0	1.59516542938127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163845632-4	16.7418219527104	0	1.35933937364005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48324503-4	44.9624903714015	0	1.33761707989387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80390885-6	28.3206506809722	0.173845404279625	0.438402810359102	0.396542631962659	0.691704764168468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49972584710748	3.74381201889115
Merged-chr4-33290301-4	28.1443933662248	0	1.33963656386763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122572654-8	134.194089780416	-0.0733818340079622	0.174264712443694	-0.421094052714041	0.673686404215814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.38977590293307	7.3168526615312
Merged-chr18-5134373-4	52.4460155050478	0	1.33778449834085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54382832-8	90.3211921714494	-0.487019461481452	0.205315840382122	-2.37205010862795	0.0176896914785154	0.296239660838145	C57BL6J_F1_Control-BALBCJ_F1_Control	7.06313770365153	6.55838871803051
Merged-chr9-118669873-8	140.110215912375	-0.172982875125532	0.212884536280457	-0.812566653021907	0.41646655721535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.72901301398436	6.56193427622519
Merged-chr14-61861534-4	31.7729037036284	0	1.33702499042495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45231783-4	24.9109978524618	0	1.35873409504443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72366739-4	32.4505531653498	0	1.33583192720857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160318454-4	12.9203067269087	0	1.34255404420332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53402934-4	49.4351943317028	0	1.33501605561803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10845626-4	28.5555424145265	0	1.34050865439254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79764937-1	3.07443279244282	0.423981622927023	1.53916990655562	0.27546122174115	0.782961914352039	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.67591700901439
Merged-chr17-44783333-4	16.8954379008441	0	1.33855189962164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128707581-4	15.4384007099196	0	1.34574527341412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65649287-1	2.05387263615425	0	1.67491271408677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72753007-4	21.11520209748	0	1.33824604077348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124201798-2	27.3799403918692	2.28970950688435	0.880544085547213	2.60033488892428	0.0093132824352266	0.19118607246846	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.94448075923342
Merged-chr9-84578016-1	1.9982486305968	0	1.62483441671264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55789100-4	22.5922277943222	0	1.34639576264236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26663116-4	22.2057600192791	0	1.3393004892625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111230189-1	1.768690729267	0	1.71091500761366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132686671-4	15.8348699542804	0	1.33638840780495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3541672-4	20.6059327361412	0	1.34339123462889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129380384-8	63.4514726089227	-0.0634506029005388	0.181839990863148	-0.348936461112625	0.727137011472792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.58244071912464	6.51508039959845
Merged-chr6-15729024-4	22.2617944842771	0	1.33400874099837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51395934-4	15.8965188022788	0	1.35191133809763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106136328-8	61.4327310108972	-6.86402903953103	0.970071027571435	-7.07580047691463	1.4858852252711e-12	8.68507902801199e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82976733429649	0
Merged-chrX-85719481-4	17.0071434780614	0	1.34847419529418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-147927866-4	20.8067171386402	0	1.33909683913204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15842056-4	10.7767678218163	0	1.34384337992108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123985071-1	4.32719048897818	0	1.40384472305843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100442653-4	22.4206974830535	0	1.33756992268224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13645131-4	23.1107606826781	-0.0362368248798979	0.476960945517984	-0.0759744067526208	0.939439459787029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55641822173189	3.52106523754173
Merged-chr17-53587282-4	29.8170808894683	0	1.34192724536305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84573848-4	21.2568850911841	0	1.34061783189478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134522046-4	22.7544671157292	0	1.33875343214617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55443322-4	15.9291286390997	0	1.34066630941557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21132104-4	37.8495432443727	0	1.33555288154779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21924181-4	36.9360030536043	0	1.33343064091872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138960079-2	3.48305554860605	0	1.54224828968888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27195349-4	19.3112369162307	0	1.33765798333832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39602679-4	23.3646822014994	0	1.34637071226024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3664323-4	29.4189372702546	0	1.33705355239934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60706460-4	43.4088991288304	0	1.33616199857146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75168720-4	11.6605384990039	0	1.34977602632125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20819333-4	10.8415078705497	0	1.35787321580968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111620050-2	5.18856746187204	0	1.41028562664856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10457227-8	126.661075389166	0.179696883648166	0.180802018018948	0.993887599359284	0.320277592204814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.90480615540139	7.06794280174005
Merged-chr1-58734219-4	13.5168405640684	0	1.34025093237991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37147350-4	22.7299588341798	0	1.34352076107842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105047789-4	15.1768991881	0	1.33833869827709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72104206-4	19.0369186741954	0	1.34388227387243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7858066-2	3.80636371209221	0	1.5640543103431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39611073-4	23.6232789376722	0	1.33658549900523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140495910-1	1.70198549227591	0	1.52596348098035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58021295-1	6.86648291827899	1.28846967455303	1.41903526444794	0.907989890620717	0.36388356282571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr6-100416225-4	17.6543355577193	0	1.35177683394031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23820749-2	3.4904805530445	0	1.42934735132371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34031186-2	13.2818241619719	0	1.34273351333188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120620545-4	19.8323325291217	0	1.34276280169957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6341643-4	18.3500830733373	0	1.33777247765643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95528933-4	28.4147051402161	0	1.33778261716289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20788245-8	95.1911434477468	0.944607283245944	0.202977429996115	4.65375526364692	3.25943647588092e-06	0.000349466878486018	C57BL6J_F1_Control-BALBCJ_F1_Control	5.56076634094673	6.49086556005447
Merged-chr2-92008441-8	79.9821302630949	-0.0447134006212309	0.245853460297137	-0.181870129333101	0.855684646854529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63845700684039	5.62981824661516
Merged-chr8-86878731-4	20.4472379810896	0	1.3541652381172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55405643-4	19.1715351442002	0	1.34620318441584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126758050-4	34.065347981751	1.75175019432832	1.22098397218719	1.43470367689623	0.151371556003877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr9-119334493-4	18.8033230550928	0	1.33799948111439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27236945-4	24.7826178241804	0	1.33534282617768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-10599459-1	2.01291158012065	0	1.5822450181846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129515211-8	66.0650178060272	0.587311303460082	0.219891149758598	2.67091833438885	0.00756440480009199	0.165803822793629	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63860318324242	6.25818353390071
Merged-chr13-51239118-1	2.40881948991871	0	1.42218720548437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8944073-4	15.3123133183081	0	1.34404545855342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85482031-4	15.6925235354564	0	1.33878466247782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71434251-1	2.35605023835875	0	1.53162868776068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6157350-4	28.7848228314132	0	1.34092901052486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13557324-4	15.1952819268946	0	1.33786561603464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125561479-8	57.3286006127962	-0.242246804268358	0.240368266725041	-1.00781524769851	0.31354316452818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83424721650926	5.59356555860652
Merged-chr6-33515494-4	15.9640343969966	0	1.34241955127279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152479064-6	28.2623760006422	0	1.33624879798528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40276088-4	18.8631874532367	0	1.34102559890684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84243626-1	5.5644773084785	0	1.37648808256407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-40705227-4	35.5147774470336	0	1.35286848617794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64780983-4	23.259366291804	0	1.34343459893585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149464792-4	56.6748199911746	0	1.33752797958764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6366823-4	29.6894021633518	0	1.33543887737695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25472733-4	18.2748579774298	0	1.33806938801013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119440569-4	21.8537182857754	0	1.33721502491065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27702871-4	25.413527355025	0	1.34455551987643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102787425-2	3.80184608613145	0	1.52383602083962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73168807-4	30.9404158172305	0	1.33809000796853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70720151-1	2.96749687554795	0	1.55412421516934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51397969-4	22.2555646462886	0	1.34473743286828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59331882-4	34.4893169446074	0	1.33598351359039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36571784-4	59.4817727159916	0	1.33657592270128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140998000-4	18.4845189597105	0	1.34166761243898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124309167-4	26.4538150933968	0	1.33981568890649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52943850-4	20.2555887219806	0	1.34444109770087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106839067-4	16.1942480641748	0	1.33986938858136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-44905-1	5.74819704858877	0	1.4101396463739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76287950-4	19.2371055562974	0	1.33937149152335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4530996-5	30.289811863899	0	1.33498665045944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99089042-2	4.45321540959212	0	1.4069733720477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-95918654-3	8.21599511864067	0	1.38114349740389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137006828-2	6.49261321099748	0	1.46259911340241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89294793-4	46.8446271815963	0	1.33555469536129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29432171-8	113.550047964679	0.238027025674854	0.236253667135102	1.00750616302069	0.313691597557638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79300484392505	6.02229348005331
Merged-chr7-120684849-1	2.59906290722397	0	1.42618554601458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86834690-2	8.12382438073306	0	1.4041992123569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50470013-4	20.2866321576023	0	1.33764043717218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44969480-2	6.11406361927771	0	1.40466452815196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81633704-4	41.4849630018173	0	1.33965993526237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133207798-2	10.6316949448112	0.360075044863884	0.763404609881015	0.471669990203499	0.637162360649133	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49049261434799	4.85538862718562
Merged-chr2-79966871-4	37.9035623092372	0	1.34480267770216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85071899-8	103.144139982259	0.204911946647185	0.197972906259974	1.03505045472282	0.300645348934487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.6497270333149	6.84873457210695
Merged-chr5-108669224-8	93.498179645754	-0.237697402125296	0.217766418062116	-1.09152459888235	0.275042113896377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.11039404185057	6.86665406860446
Merged-chr5-146781836-4	42.9583422396946	0	1.33792201926774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67195242-1	2.5261234154924	0	1.4864685873375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113355128-2	4.66692464173066	0	1.44538379459204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88515288-4	27.365171118246	0	1.33830698957199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-98666405-5	175.465461946841	0	1.40490249295809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103358797-2	6.37156507174519	0	1.41403643868859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-25748825-2	7.75559122576118	0	1.41328420155536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75877354-4	37.1011198938703	0	1.3349010570814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135534929-4	23.5558326196586	0	1.338179230263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156911130-2	5.45364108660955	0	1.38732439493278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39781508-3	10.7017318819199	0	1.34831432999227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73667762-4	29.2851934453211	0	1.33371372920487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36477091-4	46.9706595763647	0	1.33409428086501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78476978-4	26.2325490604767	0	1.33596092572766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87552600-4	41.631619789503	0	1.34094190857499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106581994-4	26.1032926894435	0	1.3384897114557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111430678-5	52.9907191003494	0	1.33944516211141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97213310-4	15.8106525284578	0	1.34100102446295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85394193-4	18.7973056510295	0	1.33733001785806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58844283-4	18.1349566377936	0	1.33954954974207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25108897-4	21.2151684751412	0	1.35349973804211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11340501-4	16.9417606854509	0	1.34065846065445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34058373-4	27.839230541617	0	1.34142988846539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149841054-4	49.7315368264819	0	1.33314547995458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79143891-4	23.1447043220264	0	1.3531319109568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75171143-1	3.08614849069852	0	1.49830675212815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139233160-4	51.8564643090167	0	1.3379759444511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43769117-4	26.1785586006364	0	1.34212417409981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38423951-1	5.10792698572861	0	1.40053637237487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-65407310-4	11.0157948196398	0	1.35637161343472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-68672014-4	18.7077564751241	0	1.36566888650859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91181771-4	45.305725773249	0	1.33624831156953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-111290776-4	23.0806333530393	0	1.34531889099667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-9953-1	34.0280725384075	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111617964-1	2.22705813254997	0	1.80742661013036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8866906-4	17.7793487023026	0	1.34089363247158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-18800578-4	41.9037245450112	0	1.33908865457062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60273571-4	19.3863006847816	0	1.33635709365597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19554031-2	5.93239178681708	0	1.38976154496116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119063598-4	46.4013602524358	0	1.33408111311085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97775071-4	24.00247951261	0	1.34443548654125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24884526-1	2.09045782308234	1.17981918028396	1.45235546516361	0.812348773136647	0.416591531601413	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr17-46857262-3	7.66867974001871	0	1.34721218564045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9382018-4	12.3167628282198	0	1.34904972406318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46533812-4	22.9897560869357	0	1.34700088321371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55293266-4	26.6596827852345	0	1.34308049587705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50539930-4	10.960954840314	0	1.34036443126788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25789377-4	21.8055232215522	0	1.33859911537991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46934378-4	15.3338353776544	0	1.34086457672274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113945039-1	3.68247711772996	-1.73785768697045	1.3546011332723	-1.28292945006795	0.199516794037448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr8-61517969-4	44.2354228466751	0	1.33469052864984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115650399-4	32.1749362095433	0	1.34214494871498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12306755-2	7.6919370648083	0	1.37987649365536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9462878-4	24.3699552700019	0	1.33907138826546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36605006-2	4.98996221162254	0	1.53848952001881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89863849-4	24.5230801562125	0	1.33470479185952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53126920-4	53.3543941805351	0	1.33938685675576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91452325-10	42.3260012340882	0	1.33508987071037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140508849-4	16.301846890294	0	1.33924513737045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120220145-4	32.8212144531599	0	1.33804346489235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119484121-3	37.5753214136628	0	1.33649405113757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110058157-5	35.0560355215317	0	1.335580152656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44496294-2	6.2652313736648	0.589390547765363	0.888620545764733	0.663264596541758	0.507161106668601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	2.06239089973625
Merged-chr5-30655715-2	4.02042495857112	0	1.47321407650984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116894788-4	12.7547312598155	0	1.34062333957074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128061117-1	2.66149198829018	0	1.45653371375402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9069073-4	24.7862581312088	0	1.34322878528617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5592051-4	11.8735821523037	0	1.34267926073282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103719443-4	17.8767504396729	0	1.34355656828037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38471898-2	6.1176752999881	0	1.36712898253713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8675769-4	19.5102571294522	0	1.33541348385039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143518329-4	32.2748546973927	0	1.34278846035642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131679816-8	161.515597902223	-0.0195319194436484	0.180438111855369	-0.108247194801641	0.913799608828969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.77221775559277	7.75379922583119
Merged-chr18-34856392-4	43.0311871882288	0	1.33362344145282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139366016-4	30.7231147791094	0	1.33861177337922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15139745-2	3.69788138370393	0	1.8583492922602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118275424-4	10.6774491835747	0	1.34922878936511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117080578-4	22.8820058973516	0	1.35822569662141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110710789-4	32.9345247389042	0	1.33523302835283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63875084-4	17.6020814515471	0	1.34048270847555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-126817466-1	3.2751586262755	0	1.3944861933788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80785324-4	24.7840489022589	0	1.3356825017791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40574195-2	4.33472199154877	0	1.43891995285524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42424706-4	12.0462651186682	0	1.35786642733707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167775426-4	86.2691459131078	0	1.34192297068194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140778373-4	15.6070228886109	0	1.34648983084871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37145660-2	3.15896712966063	0	1.42783389415766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130858160-4	42.537966733519	0	1.33730318621555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34927706-4	16.8450063636443	0	1.34895458557823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50462539-4	14.1145485598419	0	1.3447207370775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr6-57765648-4	31.6834682721215	0	1.33641561965523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3502827-4	81.2157205341129	0	1.33471695199312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70622538-4	48.332717933685	0	1.33461518132889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27249311-2	9.59844653395371	0	1.39827924312844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51520203-4	18.8878035957154	0	1.33749770330871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98708687-4	37.215689138359	0	1.33823621075611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53761893-4	17.2156568124766	2.83967732098256	1.12118671141134	2.53274257720018	0.0113174032142336	0.218699865383051	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.34263109599227
Merged-chr3-88237882-2	6.05552834011576	0	1.38583698434263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49987155-4	14.3472167669119	0	1.35266904647743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22717473-2	8.34250697484785	1.76880247896399	1.31313307514839	1.3470093111196	0.177977233896763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr2-151533858-4	30.1256483083632	0	1.33807790234757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72968561-4	37.1410977898762	0	1.33365803625769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93246953-1	1.27852507337371	0	1.89253775113715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-23669433-4	18.8485502989071	0	1.33617831240978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32147660-4	19.3142619364572	0	1.35072924726172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77910725-4	89.1859933935048	0	1.34033127058829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50867083-4	44.0915731803387	0	1.33307693254647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167833815-5	41.8882942046126	0	1.33605768248249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17875830-1	2.33840101627177	0	1.59509343096018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39714920-2	3.53388299355848	0	1.4641797985033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69185598-4	22.9335101620379	0	1.33698512173225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144268160-7	31.6643510473244	0	1.33563643973587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77452159-4	35.8883285945483	0	1.33866675540986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97016201-1	2.15690881765779	0	1.53969513448831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52041541-4	10.3298082352597	0	1.35346110277686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35899190-1	2.79034161715368	0	1.49127568494703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21336017-8	187.82724572845	0.159911818310622	0.172327883995506	0.927950918928437	0.353433029728095	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.72755827813994	7.88148185238709
Merged-chr17-74432793-4	18.6966148791411	0	1.34101824301404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141379763-4	22.2040018898014	0	1.33834789352337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101608059-8	127.068611925646	-0.342540529567494	0.176153242979371	-1.94455988305369	0.0518279715644748	0.604625371000121	C57BL6J_F1_Control-BALBCJ_F1_Control	7.47473355721729	7.12118653336565
Merged-chr4-63840632-4	15.8023170356421	0	1.33827951528601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107561386-4	32.0884830838607	0	1.33405261887303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108071476-4	26.3851386410754	0	1.33545273112085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4252195-2	4.32972764942817	0	1.42680829792736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65343891-8	107.98185435243	0.0055196271677027	0.249351557816247	0.0221359241387625	0.982339530171519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.95325945743764	5.93784229024272
Merged-chr18-26863679-4	19.5485256789658	0	1.34624146024963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105981469-4	35.4684850178383	0	1.33425044201779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88207614-4	15.7873531246352	0	1.34272827807185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-49303119-1	3.09694383533822	2.19883662091615	1.74520291382669	1.25993178414697	0.207693971645705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.65938046875095
Merged-chrX-155584810-4	22.9971408387718	0	1.33686063047647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58498615-4	83.5384046135923	0	1.33798573121499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141024948-4	15.1272907520548	0	1.34192043085005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38212833-4	22.1485954559255	0	1.34294231460737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43848630-4	28.9311067731482	0	1.34098824086175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28732921-4	29.2544003189005	0	1.33401506232734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35732233-4	30.2629782919682	0	1.33490567309583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129949556-4	19.9123036688715	0	1.34094938391465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127935489-4	43.2260826733218	0	1.33811213252423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23999700-6	31.3651992688348	0.40681095156544	0.489145714270997	0.831676409905247	0.405591619544647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04986436022924	4.29106945689119
Merged-chr12-102426503-8	105.972191704236	-0.307495013857955	0.170146690127835	-1.80723476681755	0.0707256822550662	0.735966092793786	C57BL6J_F1_Control-BALBCJ_F1_Control	6.93723503599698	6.63584422144892
Merged-chr17-5190262-4	25.9259749109982	0	1.33865476699454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86548127-4	20.4839037087827	0	1.35302779946358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120955374-4	15.2440456181483	0	1.34488604188456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35028878-4	44.4261893762788	0	1.34310160994061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70803030-4	23.9662983368745	0	1.34426797713042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186575852-4	38.5546790091734	0	1.3382890205477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17750768-1	2.49917976673632	0	1.5004755846753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51220082-4	25.5336018493429	0	1.33817630418471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37613719-1	2.35034119988628	-0.269466112836924	1.51836286868911	-0.177471484843125	0.859138061489224	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.600815099743027
Merged-chr18-82867732-7	31.186447375491	0	1.33541236680859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132078563-4	31.0062773039488	0	1.33546141413787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27625512-4	34.663952013089	0	1.33518596988233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62627795-4	40.4916077034413	0	1.33745247483376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43557284-4	30.9673076372706	0	1.34870116530362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33996742-2	3.67598789664861	0	1.46850983240674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95195982-4	23.7188160718754	0	1.33662660949309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32771255-1	3.26733876645193	-2.0978560243548	1.37760448599807	-1.52282897281284	0.127801499384068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	0
Merged-chr3-117319846-8	68.461466807177	-0.375092861294004	0.2379480842855	-1.57636428307594	0.114941874747206	0.990276964014969	C57BL6J_F1_Control-BALBCJ_F1_Control	6.73576999630942	6.34325926601134
Merged-chr5-32881373-1	5.03512441295043	-1.86581810914604	0.79696655660408	-2.34114981825134	0.0192244509608755	0.311926561131838	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41064498239285	1.66683653681755
Merged-chr16-11433969-4	22.2376706633193	0	1.34472950026644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31109412-4	33.5726523308188	0	1.33501735691446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19666049-4	13.59543394245	0	1.34344916529775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65730532-4	31.2638784568978	0	1.33813352444559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75146221-4	23.7221488986639	0	1.33459513652238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60835341-4	14.9720227548566	0	1.34048347451198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117312877-1	2.10267629043984	0	1.58558488977503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70261854-3	13.3056568536574	0	1.3559374180163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95651112-1	12.913710548518	0	1.36488830798423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44529484-4	22.7869839709725	0	1.33655374634163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117476759-8	35.3328493003525	-0.246524859093817	0.254927245376162	-0.967040061685261	0.333524006987633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6194594348772	5.3688595302625
Merged-chr5-136217327-7	37.9077664578527	0	1.33609971455816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80391886-4	14.6262495579421	0	1.34653344880451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87327160-4	25.5091766212663	-0.296674416014925	0.849626290339247	-0.349182245639393	0.726952494274703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.18984215491549
Merged-chr10-88008969-2	14.0497154781962	-0.034923070654582	1.10796023075758	-0.0315201481832096	0.974854724200645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr10-66931739-4	27.9843918244424	0	1.34023503852334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111930105-4	12.332050798306	0	1.35539354822016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132780503-4	21.8192447938336	0	1.34609719602925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19215923-4	17.0980729639281	0	1.34292063518533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85256282-4	13.3748035041659	0	1.39661583007191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25437751-1	1.8849092052147	0	1.59131471096253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99090674-4	31.4306425320598	0	1.33751511928282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145653457-4	22.9026656932955	0	1.34265151463141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167381818-4	19.7764824918013	0	1.3393015467778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25382346-1	2.07447668713287	-0.769599985259681	1.60971865863789	-0.478095958650873	0.632581908363149	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.465515277017237
Merged-chr18-39560949-4	26.7505318591472	0	1.33641767434436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85705532-7	94.1471055020738	0	1.33485900803015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52239826-2	3.97516073924187	0	1.44469479974916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105965366-8	188.765082429453	0.1160943770644	0.160103380963747	0.725121333263333	0.468377597888952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.76266067878844	7.8841969498606
Merged-chr6-135296558-4	27.5172498389037	0	1.3393343900679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62322859-4	16.0014225029153	0	1.34133650307299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167649502-4	44.4419978212159	0	1.33421924798761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99109784-4	24.657223676325	0	1.33775484516163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40845176-4	16.49246638819	0	1.34953476656553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68863976-4	31.3776791531225	0	1.34611554092702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55471613-4	26.793081755853	0	1.35250102661603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54435345-2	2.9097363862467	0	1.50817240960113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86833900-4	77.271664210832	0	1.33735590019121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59207874-4	30.2768058884677	0	1.33498716739082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53700631-4	17.8220239202468	0	1.34280976217258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125387753-2	11.5376480475387	0	1.3512798965635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143081526-1	2.59440584806313	0	1.399230231109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119978021-4	39.7684276113625	-0.0344175626878921	1.08697421131083	-0.0316636423658905	0.974740289527707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr5-90700381-4	35.6268317958611	-0.204090443252433	0.441075565792552	-0.462710834787937	0.643571650986634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56349751288543	3.43132429706353
Merged-chr11-72696879-2	4.53650630291229	0	2.19319220210375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81163326-1	1.2111296326318	0	1.65600166796859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-126996580-4	30.1901867474786	0	1.33959401808891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110568719-4	44.3469541638518	0	1.33714875521672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91534655-4	21.3417308775064	0	1.33807726993119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53780024-1	2.71834161815159	0	1.54074887662465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94430954-2	4.26957716734198	0	1.46235313209115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98171542-4	29.4424503837154	0	1.33774685105739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30337074-4	23.4428260242024	0	1.33795045287754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99379757-4	43.3315313362259	0	1.3424248095913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3153179-3	17.0617731829498	0	1.34608702453838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143581182-2	4.09935046088646	0	1.39595703043459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56266056-4	20.0551122411029	0	1.34923405504753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37157167-4	25.3391544415315	0	1.33599085387033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110845268-4	21.2084710399803	0	1.3432174096015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131287050-4	20.7748530790652	0	1.35337562116894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25543856-1	4.3333298985356	0	1.38036208984436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4506950-1	2.58137925143686	0	1.42389155956661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16571543-4	28.5157366041365	0	1.33967768318726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78392360-4	36.4662883296871	0	1.33433083465507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35156627-4	13.0805607172907	0.76848417974155	0.8098388787988	0.948934658313035	0.342653845942353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	1.52633957112176
Merged-chr13-34793256-4	16.2435855382886	0	1.33671826831507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117211551-8	50.9434684251396	0.26532117265899	0.250617672003614	1.05866904970358	0.289750528022294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22429701144239	5.51988294118511
Merged-chr3-149451637-4	29.2482292474253	-3.1302321247021	0.491157151884971	-6.37317834564527	1.85150362658566e-10	6.25129724456955e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68884294254469	2.46685710233367
Merged-chr11-121734407-4	22.8651569982042	0	1.34334177048285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73148360-4	13.4976534954947	0	1.34009797827887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96331323-2	7.82820944716976	0	1.36542302139193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20111467-4	15.2818574972723	0	1.33861607260478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10834253-1	2.44877552304642	0	1.5552258021037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131026016-4	23.6402542296994	0	1.34342962988625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113397866-4	17.2925531599656	0	1.3421534600195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80172022-4	29.9343445522277	0	1.34134804232105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86960701-4	12.6864217645816	0	1.37421029142232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10876535-4	47.8469804757457	0	1.33628155879773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141653286-2	8.25371518153263	0.996944478317411	0.94359437106773	1.05653923856001	0.290721923813019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.4994506617149
Merged-chr11-64655312-8	121.574527868028	0.497697699567139	0.237149043802155	2.09867048834635	0.0358459579154708	0.474788191018737	C57BL6J_F1_Control-BALBCJ_F1_Control	6.81568470556857	7.33992934734787
Merged-chr2-128396129-4	13.7969309724714	0	1.34351620278023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-80547382-1	1.81489589630929	0	1.69606045754458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98881666-4	30.0671981546739	0	1.33885551386087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21135695-4	12.1276359302402	0	1.34744179764909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53141168-4	16.4464951661771	0	1.34938815687421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138261739-4	31.8810968306763	0	1.33414334445297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84311921-4	15.4242380493246	0	1.35397246291876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47031584-2	5.23773305777476	0	1.40513095458937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17584081-1	2.11863699388406	-0.200750294352161	1.37567357023887	-0.145928728075588	0.883977652620391	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.577068348605183
Merged-chr19-41900708-4	18.0100649959357	0	1.33882313842025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124723834-4	48.1280625610016	0	1.34221755372738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119157914-4	26.1447798117196	0	1.34403249649284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31733082-8	132.423775363937	0.951455124913511	0.171903322672871	5.53482684406348	3.11535973768779e-08	6.27214222151743e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29147953962284	7.2355702920947
Merged-chr15-12233229-4	21.5843819888061	0	1.34608252123685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73876538-4	14.2252227610518	0	1.35705816286775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79225795-4	21.198065174694	0	1.34249014605596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98683942-4	12.1598563363659	0	1.34102647306761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39800427-4	43.4849217123976	0	1.33797084925713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-17024931-8	61.9410252664061	-0.316510782621056	0.237301920349582	-1.33378938592148	0.18227289049158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.35892737932957	6.05034614704231
Merged-chr3-89196675-4	37.7886646540265	0	1.33317637314263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97546327-4	22.9693756504422	0	1.33644435566959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61441543-4	30.4083178123155	0	1.33857873353895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28738158-4	18.9874004357727	0	1.34241651643045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35124403-4	56.7585257754677	0	1.34753630020982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154878012-8	51.1164606069291	0.297042249758215	0.274064140479549	1.08384208615713	0.278434821284232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8373099894839	6.15222361086798
Merged-chr2-91206777-3	18.7038833780717	0	1.34615281054625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180428079-7	38.0699306739273	0	1.33529193215003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116366354-4	11.1830708810435	0	1.34571735145173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18821784-4	33.8816449711619	0	1.33618887175664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-127780271-2	4.11374135396415	0	1.43042869125827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4908461-1	6.17773046085863	0	1.35609649285454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62217468-2	7.46089425002881	0	1.37889541089647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-18036385-4	19.246122549415	0	1.35174728541978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57801396-8	74.9492437367748	0.22578992318101	0.215720578180916	1.04667772117525	0.295248242370685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77415786599935	5.99931513311509
Merged-chr15-3234320-4	19.751316168264	0	1.33713794276463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117121256-8	69.422430284486	-0.214266926996475	0.200838341724142	-1.06686265758347	0.286033859520023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64634344706398	6.44537022924011
Merged-chr11-98710671-4	22.8490988105755	0	1.34134307886952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157063581-4	19.2022862636816	0	1.33749780782555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137386551-4	29.2229174543676	0	1.33469124915293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101686578-4	40.4510377704837	0	1.33980290147337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63931754-4	13.5163786410035	0	1.34816196898765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25165792-7	52.0506588300956	-1.83799054919399	0.43818230065432	-4.19457962233845	2.73378111960162e-05	0.002008183890276	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72293868426448	2.98695882419101
Merged-chr14-54756540-8	92.3755052280313	0.291140500071406	0.208659263203825	1.39529151786092	0.162927948855372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78780935845623	7.13081503616192
Merged-chr7-49070801-2	9.41576147333344	0	1.37337881655955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137558973-4	31.2687871402888	0	1.33771847097576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37320235-4	25.6334350317847	0	1.35037255462755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85255632-2	8.22022421814875	0	1.36486914071544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3135434-1	5.42966479442879	0	1.43037675315757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21161499-4	39.4896036145258	0	1.34667279022079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25570485-4	55.4506810711012	0	1.33423778467152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30738659-4	33.9699222753927	0	1.33841872453057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83266159-8	82.2709284412603	-0.790629587217635	0.230345740475667	-3.43236035354929	0.000598351940247323	0.0245718267607445	C57BL6J_F1_Control-BALBCJ_F1_Control	6.86812048862212	6.07909032997707
Merged-chr6-140609754-4	9.31800687905607	0	1.34359818094698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105751909-2	4.32342034973295	0	1.48221381016449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75961242-4	46.2343412270214	0	1.33875565953045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-130428865-4	19.5630350300095	0	1.35636015792721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3139528-2	6.37556071902216	0	1.38179356955954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97447180-4	22.5696143355628	0	1.33922466009142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-5101421-8	79.4822276930845	0.100439136070527	0.22316095439329	0.45007486342578	0.652656460918152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.38482989104381	6.5133482927255
Merged-chr2-167925511-1	17.6307311251432	0	1.338130843808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25481080-4	30.2545605425859	0	1.34436358471303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21934949-4	18.4053238751996	0	1.34177276706541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96765800-8	67.7805536326259	-0.373635292799838	0.266931157876683	-1.39974402303552	0.161589985767733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.33853060830194	5.98440087298454
Merged-chr4-9118468-4	34.2754060621142	0	1.34766883968674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60892974-4	12.1855246543316	0	1.34960123598507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47190183-4	23.7605400713771	0	1.33569014344749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68514157-4	22.6315633990588	0	1.35493066427561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-28944454-4	39.7194247102153	0	1.33628403937453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46798516-4	24.9088016609993	0	1.36098950426103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110379522-4	22.2747190460168	0	1.33536301396739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99392148-4	30.271935881237	0	1.33926028257291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81298097-4	33.4233601825121	0	1.3354802689244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72263021-4	32.8377791096785	0	1.33522841116679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25708183-1	7.44528477306059	0	1.35509548013207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135517119-4	34.8321068940496	0	1.33552639622475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20372317-4	24.1190510994112	0	1.3351188742953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11915682-2	3.52560865055151	0	1.51958127346084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83845400-4	44.6454091763859	0	1.33746864854649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36082413-4	32.2324934503475	0	1.3397774764648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93435712-1	2.0965908379501	0	1.50017145298955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131473979-4	16.6288090557847	0	1.35247311272167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119113961-4	17.811385216155	0	1.34028747350696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71179076-4	19.3982846674577	0	1.34817746149948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117158739-4	75.7230993921066	0	1.33572271257336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64925868-4	45.2311641944923	0	1.33616909098101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124272315-1	3.01264674147198	-1.13503199421555	1.28755892323247	-0.881537903807928	0.378026747917353	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	0.724326877898254
Merged-chr14-102806735-4	29.265809212804	0	1.33744804497492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-37971927-3	57.6196857438674	0	1.33670247156441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156523200-4	25.1649390547893	0.627263055816329	1.33566290429441	0.469626770197449	0.638621695223469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr11-116389377-2	6.46324595067686	0	2.27118126510741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38187624-4	17.6747573504992	0	1.3433827435255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132243055-4	53.2878213076214	0	1.33965328144399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67329591-4	41.9921280353304	0	1.34069298588549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167225136-4	29.1410855164729	0	1.33579839924803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63384893-4	20.7653855377374	0	1.34225929131007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39430913-2	6.65957836853149	0	1.36850559999382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31374576-4	16.0514691450475	0	1.34253585144707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45247794-4	31.1033627318855	0	1.34189765087383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21283195-1	4.74154702089384	0	1.47206630533053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4367315-4	25.1178013065894	0	1.33662173205985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21158756-2	5.57830106382777	-0.693035421139173	1.39536332631931	-0.49667022779455	0.619421620618265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr13-113623035-4	38.4420271837441	0	1.3331202743625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3164536-3	19.9596400530494	0	1.33838997701502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78217109-4	35.2379447318374	0	1.33687449140995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102025949-2	8.52258287587413	0	1.34923321527791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73612210-4	19.3655439421625	0	1.33782349768723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171117137-2	5.18138906689615	0	1.50951036401392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48234675-4	15.335057486196	0	1.33896234128076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34010038-3	13.7252391691528	0	1.34511270735225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116314802-4	31.4282280991439	0	1.33896165194406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-59854981-4	12.6208008756401	0	1.34500894804224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5980237-1	1.8699919416114	0	1.45041279728085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120519918-4	26.0604539272513	0	1.34205185173283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178342790-4	26.7673107807258	0	1.33679682861577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167336622-4	12.8858929950451	0	1.34597441883075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83855042-4	18.5916267068075	-0.383401032377662	0.645109136382932	-0.594319644157199	0.552298342248542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95988517553914	2.19776446004195
Merged-chr10-60932157-7	48.716682529871	0	1.33398794194657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-19144649-1	2.57631677567504	0	1.46677188934669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21895709-4	22.5448181697039	0	1.34072580081031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50182631-4	22.2568072212964	0	1.34439043530021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80782353-8	68.1555500306186	-0.240164436922814	0.262479194758243	-0.914984660570976	0.360199683006532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66088166801418	5.43110210466826
Merged-chr19-42000080-4	17.6073306539912	0	1.34514695803985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27764620-1	3.66699660337479	0	1.49150295136672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35050227-8	110.699209428647	-0.0402746477356264	0.228398253420949	-0.176335182657454	0.860030623305254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.810509282465	6.74190390009579
Merged-chr12-41275032-1	2.44285153403438	0	1.45958948589251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12009369-4	48.9385255964951	0	1.3334288711486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117717776-4	35.1150009523797	0	1.33770359741849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92410328-4	27.6067362309209	0	1.33359629694541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98562223-2	3.51495619896998	0	2.43858989630649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79016002-1	8.75069880898202	-0.904274664777602	0.593675051530364	-1.5231811787384	0.127713383532469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11754644797313	3.27489809003793
Merged-chr9-69109800-1	2.19496253584369	0	1.54190688061392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172513122-8	61.3314898360467	0.464815389173915	0.255926575966588	1.81620602478814	0.0693387742494282	0.728204487910484	C57BL6J_F1_Control-BALBCJ_F1_Control	6.11682711932013	6.58286472235003
Merged-chr1-35869751-4	20.4520842286528	0	1.34466871468895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34389432-4	19.9704363949129	0	1.33557506778434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36631783-4	22.1837693546818	0	1.34693795522615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32508877-4	27.3316443941594	0	1.33827308238826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80919260-4	20.8326339587957	-0.699740777137333	1.00425682725861	-0.696774727484265	0.485943784448129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.577068348605183
Merged-chr3-20027520-4	46.3435377119749	0	1.33701733319521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46245912-3	11.0779641809509	0	1.34353081893046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83274278-4	42.3917458550854	0	1.34445321501433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83868108-4	10.0071565703771	0	1.35020796947868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134302942-4	18.1741664989178	0	1.33769589765327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167072027-7	28.0446078818694	0	1.3371256320665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55541895-2	5.25959360907788	0	1.42150036304581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63714905-1	2.39977182838271	0	1.50712674780675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150583657-4	20.782140005451	0	1.34195016503688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8509866-8	99.429510136243	0.493118289584167	0.192029464170752	2.5679303523218	0.0102307709343872	0.204455039164189	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04902874462368	6.56167442541037
Merged-chr8-75067500-4	30.1075521635528	0	1.33719129258964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47184397-4	29.8966168114971	0	1.3393729008829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40679852-4	12.8406449260689	0	1.34404918843484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12016376-4	12.9925600112433	0	1.33816890269406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99563860-4	18.6527179026869	0	1.33740689179839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120441936-1	2.65882386942048	0	1.61595493557648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25858725-4	11.7696823486717	0	1.343634685152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101498677-1	4.55412381499595	0.825522216842989	0.946543392462062	0.87214408068046	0.383129781044672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	2.2226307791246
Merged-chr9-25486458-4	36.9777129647384	0	1.33541596375716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68203534-1	1.78778493176796	0	1.7337578437368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48787939-4	34.1964853960593	0	1.33997432123297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99833991-2	4.17292474386194	0	1.43310395619195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4567466-1	7.28988595495386	0	1.38372291239796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39741388-2	3.29465558492662	0	1.98876748666637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81351650-4	17.9141483323073	0	1.34045080518015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64664162-2	6.33786970384778	0	1.42797161700035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34866444-4	10.9632443140812	0	1.3500703316359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16215140-2	5.15669004974926	0	1.41943975734416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43321639-4	34.2941943357356	0	1.34066880853398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8610088-4	55.9049292222171	0	1.34186329502269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148583533-4	23.7676211110138	-2.81718049547945	0.463379048567264	-6.07964581952933	1.20448302105676e-09	3.41012981987628e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73408535086829	2.42342003899653
Merged-chr2-20899521-4	20.0914799405181	0	1.33852497354134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88714383-4	26.0774162472385	0	1.34163472983807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58531454-4	24.7264589010498	0	1.33798293148802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9737843-4	55.4750131474063	0	1.33561315022084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75783319-2	3.53183833232698	0	1.47487326101093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22358997-4	23.9675012383025	0	1.33324481140944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143631759-2	3.24118199051994	0	1.53152802675069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55467771-2	3.8418088823071	0	1.44596019121284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35130849-4	49.3639511921437	0	1.34542487264625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55476421-4	23.7070610273236	-3.38911241144749	0.460075274868178	-7.36643022692002	1.75257602702358e-13	1.36097543218535e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.21374113223896	2.3554851841168
Merged-chr6-22490949-2	4.36563133433449	0	1.44103289427429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7222726-3	38.0746471975651	0	1.3415280056685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124478174-4	23.2510874063359	0	1.34429046847408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9110570-4	18.6403981976176	0	1.34035737455011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-56064570-4	16.1853250173778	0	1.3420013419802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92658773-1	2.65696601425886	0	1.49937711563098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30616854-4	14.7035088991254	0	1.3403524962615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80833724-4	16.4682842667292	0	1.34529768930932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75152842-4	17.0603413071644	0	1.34419656687933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72336250-4	21.3551944762731	0	1.33791673341569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25355493-4	36.9771856513896	0	1.33342161337258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-20033107-4	18.2910151820916	0	1.33933142615916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28751949-2	5.87991751710225	0	1.40410418754532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126826611-4	10.3630409746864	0	1.35207547269271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104384184-4	16.2219314397288	0	1.35361219475791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25440453-1	3.27308741997002	0	1.42233613678413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78919476-8	53.1741872167276	0.0145938615295811	0.232156271332542	0.0628622326065739	0.94987620934974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.22318391819147	6.2260250032091
Merged-chr5-118466549-4	16.3111164426029	0	1.34955100057919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35172658-4	19.2463959587225	0	1.33944204378585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48433692-4	14.6619695835991	0	1.33982397842304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91485898-4	16.4845402226866	0	1.34536502680514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20698227-4	10.4442273855664	0	1.35116366539816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169778829-1	3.59472104870819	0	1.51768889127777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66494599-4	34.2542378700813	0	1.35424448987257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3134517-2	7.00642593152202	0	1.40319727110416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50840635-4	42.2655995608387	0	1.33310360328275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29887692-2	3.66040250085657	0	1.6399957324029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78149289-4	23.8851856670461	0	1.34126869517224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151819409-4	23.9811081909922	0	1.33553585158936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71662193-4	16.2769485607935	0	1.33730321608689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125183762-2	4.42074176582529	0	1.36883523466539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108446340-4	24.1478491958322	0	1.34822272365017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106500159-4	38.4709395488889	0	1.33785707903674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43772871-4	32.1571086868012	0	1.3360922769078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24989018-8	71.7023746995501	0.0351013765408095	0.243162087566089	0.14435382132204	0.885221080043818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78665271613187	5.82952846097124
Merged-chr11-52076462-4	39.9616282318451	0	1.33334890968282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53400507-4	25.2247703134825	0	1.33863624442034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86556855-4	22.3633916676115	0	1.33547182946371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107810617-4	17.8236758827562	0	1.35156420207736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89421694-4	34.602981866247	0	1.33743418602535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5336044-2	2.58863332620275	0	1.51243930970311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32608251-4	18.8222527545208	0	1.3383163175455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79626871-2	5.96476961182705	0	1.36195528037153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52061357-4	41.6142731074506	0	1.3326418289612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33353639-4	20.9163156969319	0	1.34361755303115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73941961-4	18.5159405865748	0	1.33912503126897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24879319-4	14.395955526437	0	1.34588283620806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166697477-4	14.7007727751344	0	1.3560715098544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60818854-8	98.1884450038091	-0.194505395447571	0.221537425776938	-0.877979848169831	0.379954654833034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.72931259791367	6.51908404415425
Merged-chr8-80948589-8	96.6037322741975	0.0885833303885749	0.246746549257878	0.359005346396944	0.719591089691275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.81081901113544	5.88608172058144
Merged-chr10-13273934-4	27.8998877224202	0	1.33459643260176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8769274-4	16.1450937463494	0	1.34596449119396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9605650-4	49.984348097727	0	1.33592453892257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115763447-4	16.209613285085	0	1.34336704939564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75172256-1	2.29744494990922	0	1.45506216336954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3427857-4	14.0225323183473	0	1.34383554140974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171129451-4	39.4678654223057	0	1.33898810735401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3871847-4	11.0825562541149	0	1.34248536960944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27012128-4	13.920212990304	0	1.34047387824671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70140744-4	22.0096179885476	-0.122214893257348	0.564976662536827	-0.216318480675973	0.828739504582072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89188180851871	2.95758019086843
Merged-chr6-17598726-4	19.8670125166401	0	1.35073880164442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122939818-4	13.7451195680531	0	1.34934100309927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64592531-4	40.4050418169931	0	1.3370192955798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55733964-4	23.3827203368434	0	1.3407900875468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69081620-4	11.9296863625092	0	1.34882344898902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55507223-8	68.8604478434425	0.132874696746982	0.226579055874457	0.58643856659287	0.557580833733881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84710786777629	6.00874022175537
Merged-chr6-31157164-1	3.84593059840152	0	1.41684526391161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12224136-4	34.8509112593962	0.861858422984005	0.564943520519332	1.52556563918413	0.127118074909287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22772873920999	3.24451627962684
Merged-chr19-34517408-4	14.4387637573556	0	1.34300876493378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142448243-4	13.7708792164494	0	1.33850997130947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25582247-2	3.19031110274621	0	1.44057747576173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4113849-4	19.9734654562571	0	1.33855651359306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132567529-4	62.661548155206	0	1.35539974428722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_GL456392-22150-1	3.80854205144366	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22799726-6	34.8525426020789	0	1.33294981990561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16048307-4	44.5677686194527	0	1.34175700330465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69516705-4	30.2618322684886	0	1.33435428209881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54237191-4	18.2624145375197	0	1.34128870054385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120518287-4	31.7565564463259	0	1.34873874804395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112897700-5	45.1539439923778	0	1.33366058904949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115066930-4	25.124476361039	0	1.34573679357278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148527237-4	20.5347967413615	0	1.34180202575594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34495185-4	20.35639512051	0	1.34270289724457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80831701-4	13.1016828547462	0	1.34385196471573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48998868-4	24.2431527133237	0	1.34015923184359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101909183-4	52.0986302077763	0	1.33779787610842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151625453-4	13.2132822631437	0	1.35048489993085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19170792-4	20.4690931419396	0	1.33692722216728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47508132-4	24.9224810965515	0	1.33948208100527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34907358-4	32.0280589474427	0	1.33848394490083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42841751-1	2.36016421442843	0	1.42662003926578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140642267-4	26.1791214383882	0	1.33440064307045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80933786-4	41.3614135374853	0	1.34312462943024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63616661-1	8.90975992324002	0	1.39916625978656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60515598-1	2.10680278984581	0	1.54913801689709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52538544-1	1.4625640115961	0	1.79685014030554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9125397-4	41.0201696637658	0	1.33612903299647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44070829-4	11.6494778474068	0	1.34271065063792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28616844-4	40.6749969110899	0	1.33600194444929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75863918-4	27.4695397371597	0	1.33664323329664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76202082-4	20.493578210632	0	1.34679086202517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3360154-4	24.0534898071161	0	1.33988187967362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5864576-7	47.8014978277779	0	1.34071486353678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159736438-2	3.3838495182562	0	1.41141997624302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125463033-3	27.7806300766118	0	1.33517730377827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108554756-3	10.5999687081082	0	1.3503186303391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93917135-2	8.17221062353744	0	1.36396976609281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109750863-4	41.3473942573485	0	1.33702340709417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135655378-4	37.616002129212	0	1.33325469088396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99194848-4	18.1960984922243	0	1.34101685947666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101686418-1	2.26545468530078	0	1.55952703776625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28644264-2	3.56137958657282	0	1.45403049229416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160210035-4	30.7959510347338	0	1.3338975695263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73058911-1	2.16511234247146	0	1.49336394885635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137909629-4	11.7524661774898	0	1.34348976416146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16571133-4	31.180586211377	0	1.34016760937347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171827862-4	32.5433889204855	0	1.33885644304541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156986401-8	100.303963420615	-0.00902959885986076	0.175823914687322	-0.0513559197900845	0.959041909304107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78539200127178	6.77756153013017
Merged-chr18-39636285-4	12.4347336826492	0	1.34588972742075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52914730-4	39.5899842040029	0	1.33915247326799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21925477-4	11.1986396894617	0	1.34386446112819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191850037-2	22.8641432289917	0.446987719256154	0.510311689155315	0.875911190660795	0.38107831541742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62358588376636	3.51490283621144
Merged-chr5-72291473-2	7.1457569165992	0	1.43468820203086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91433708-4	17.9285615907233	0	1.3446788713609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58487433-4	13.9869017122425	0	1.35473959816904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124756910-2	4.78147462793217	0	1.43943580584836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29498282-4	19.4251437004439	0	1.35057843802229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65960465-4	10.1773414406552	0	1.34492723083786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16879922-8	75.7037376274968	-0.239520546971765	0.285161072371081	-0.839948261451609	0.400937396314917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74140496853731	5.48210469251676
Merged-chr8-104373831-1	3.15872313018268	0	1.43556521513005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73767342-4	16.3895532928655	0	1.34102880573355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21213620-1	2.95800612045101	0	1.42727354712322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6444053-4	12.5316970013873	0	1.33829714865661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16210749-4	31.5139871808162	-3.51612846305554	0.466682133391381	-7.53431128272218	4.90918915759107e-14	4.23585100662687e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90021687821239	2.16077569929116
Merged-chr6-82714411-4	11.0489114169685	0	1.34949906438919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173771946-4	12.4942187415707	0	1.34549064805696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-18013439-4	19.1149180981874	0	1.3353739431502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155091542-4	42.645188649654	0	1.33374428255372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86214416-4	24.9345376187713	0	1.34715171575368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36720130-8	79.7350032414888	-0.376333446580985	0.186164309480716	-2.02151232763532	0.0432267575209465	0.533673248258262	C57BL6J_F1_Control-BALBCJ_F1_Control	6.79854431772732	6.41006949687101
Merged-chr1-177569713-2	3.29997526235575	0	1.45760711100648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135300472-4	13.6253377284864	0	1.34015143711356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52059944-4	15.9711436556588	0	1.33745711502821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43094580-4	18.1265861647099	2.93438199505851	1.04937496538905	2.79631408394672	0.00516891405597587	0.126623253343304	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	2.56710344163769
Merged-chr11-70442088-4	24.8950122220194	0	1.35164039020255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92052442-4	18.5104476053107	0	1.33765063858948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-67576453-4	26.4663986395476	0	1.34462084735145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75186442-4	15.8611046384903	0	1.36547068643172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123845274-2	6.61670830599294	0	1.39329304434894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73172714-4	56.0570627097063	0	1.3438554365687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86065141-4	29.4376071946426	0	1.33747910083752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90713353-4	35.7993040472984	0	1.33881205894621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183320944-4	20.7524466671007	0	1.3417070598986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45262154-4	42.5403602507734	0	1.33643433052536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91073697-4	12.7648453780683	0	1.34566200078978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33311265-4	26.9196503391901	0	1.33651489812425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54936664-2	4.73143316138153	0	1.60721071233681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85596088-4	21.097034278652	0	1.33830149956718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130834472-2	11.6958741422718	0	1.41642940538962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13438608-2	6.75555628532088	0	1.3765583168761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28109544-2	4.51469515452615	0	1.40881679061491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51881363-4	13.7550345572677	0	1.34186674672699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22282995-3	22.5351812921279	-1.95696264470586	0.624045407518023	-3.13592988768104	0.00171310153166281	0.0549071262733837	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14675645184521	1.71762629844815
Merged-chr9-119568864-1	5.55624902160878	0	1.42926872562044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23274536-1	4.30299919257869	0	1.39412376405461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84084138-4	11.4918941710839	0	1.34646896604885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138262575-4	11.3107054581364	0	1.3448663327278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84108175-4	21.5792386624697	0	1.3455884699895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34135527-8	103.657414622502	0.0548895764854933	0.203090748230602	0.270271181546725	0.786951634413101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.59448046490835	6.66750305719536
Merged-chr17-56075099-4	36.5396087658451	0	1.33954128007316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53434859-4	19.1041154789973	0	1.34253819347076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38536557-4	20.8592458355281	0	1.34330218399812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54823076-4	13.4760626320273	0	1.35926440962463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32192236-4	26.5679602357214	0	1.34286765636351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31336858-4	49.6164881669317	0	1.33345691968121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110970026-3	23.4297010274625	0.241772957876271	0.57495237882999	0.420509535708456	0.674113264789834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83247173307855	2.29429615377373
Merged-chr6-31080331-1	3.7368352157617	0	1.38306110443809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73148922-4	18.3484916495707	0	1.33621650146287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13558791-4	68.2026269425397	0	1.3344475418041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31039823-4	31.7126031665847	0	1.33625121596096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88635758-4	26.0538127621199	0	1.34780353392144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132620183-4	18.4209137288745	0	1.34947914416539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150828893-1	2.51723905251659	0	1.42323669432634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45959832-4	28.7956327391806	0	1.33679559323159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36941358-4	24.8221022286249	0	1.33842795467572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31079856-4	47.9977487136793	0	1.33503452238989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97430498-4	14.9191608999385	0	1.35063964445716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85524609-4	30.2600906146219	0	1.33910214465155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16314054-4	35.57375752939	0	1.34250453621135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38871207-4	23.5437025742144	0	1.33679583649978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-59845923-4	16.3788278004991	0	1.33714112713021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71279593-4	17.7621426191723	0	1.34706323287206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38463351-2	4.01652377468546	0	1.52196930565023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20661162-4	24.0982626561429	0	1.33616372295807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14842597-4	21.3150597479491	0	1.34249603880797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8224086-4	21.6726447071196	0	1.34147415638217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21289823-4	22.4838098222668	0	1.33731530182913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180957298-4	67.6121527007627	0	1.34206605380437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91712982-4	71.5648789549734	0	1.33892435009348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20377512-2	5.78638913265253	0	1.46512345140967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60481193-3	13.0248325999902	0	1.37498717676144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108582377-1	1.78776437773958	0	1.46274778739855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113418309-4	38.1265637853001	0	1.34204432346662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12802993-2	3.96101053469298	0	1.43275579033306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170330015-4	17.1915095301198	0	1.34468535114992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84119835-1	4.64821340737941	0	1.42380637440037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77030575-4	44.5475381248217	0	1.33582771054578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58415397-2	4.97705788653483	0	1.79295968334289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113635062-1	3.09788511881631	0	2.10994557762717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140529294-4	22.4577706615266	0	1.3441051933371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144241100-2	8.25373555649616	0	1.42170759004693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60940158-4	31.170240760539	0	1.33507415547889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127240293-4	25.7388050841727	0	1.34196078562903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69586201-4	14.1867166154135	0	1.34515284781626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105073190-1	1.70429678093948	1.83799520002058	1.6230879925753	1.1324063811872	0.257463623323661	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr14-17756973-4	22.3138983486183	0	1.33615794168666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88287766-4	15.9376835207915	0	1.3427641692812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39278522-4	22.5918552177675	0	1.34533637783238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52924504-4	14.227510643414	0	1.35126470278548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51709358-4	55.5807131449865	0	1.33278869300793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68061222-1	5.52749397267353	0	1.35899974560917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105723583-4	25.1935507289393	-2.41604589112251	0.743159099269687	-3.25104798352976	0.00114980450188731	0.0400398609340759	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14237932350266	2.94375481845522
Merged-chr14-33857168-4	12.0085490991035	0	1.35081358456367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95571998-1	6.29053585200269	0	1.37501954848064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73490104-4	31.3908645866545	0	1.34240379373632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117022026-2	5.37555422618278	0	1.39816247479319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39266771-3	8.33339691453908	0	1.35314745841851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144316422-2	3.76159597290854	0	1.41228087895061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88654856-4	24.8699163217742	0	1.34646019969448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4567793-4	14.1082666912771	0	1.35761997722902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119000197-4	28.0280727455881	0	1.34921158614579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26498456-1	2.18703424765176	0	1.53780471268712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43786767-4	22.7961335560471	0	1.33686270943289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181274000-4	34.5189557424591	0	1.34387047316504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23984390-4	12.109342040071	0	1.34011438277273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11804648-4	12.8491453183027	0	1.34577513339964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145808533-4	28.6017135006439	0	1.33883515617167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170220591-1	3.46174565964785	0	1.38725872111793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128750001-1	3.03811287933872	-2.23035481903644	1.49269565227874	-1.49417921572398	0.135128783516663	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr12-95747047-4	30.0526738239994	0	1.33377582237522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59004250-4	16.1936005263122	0	1.3445607273586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116634008-3	13.4736356536479	0	1.3518464083118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-54112718-2	7.48061823911683	0	1.41198420518667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17730463-4	13.4670183132314	0	1.35245735393897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119813172-4	72.1332873215694	0	1.33674516978672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11461603-2	4.69517839791463	0	1.42521129873331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116409677-4	18.7744020835878	0	1.34189574983926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134093158-4	95.1998508232845	0	1.34147465977017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91354730-4	38.0197512523219	0	1.33704004470919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13601295-2	8.92522042594009	0	1.35900821870149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130839950-2	8.34436445785182	0	1.36308183015294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59049041-4	17.5781778139918	0	1.33865234004504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100499960-1	5.25780482263538	0.134074195396843	0.913015163726301	0.146847720304714	0.883252217585259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38963397465878	2.80872699067453
Merged-chr2-35661556-1	3.59539391337399	0	1.39170957821364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120009442-2	5.32821909381583	0	1.51811228865084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32113734-4	31.7725157198806	0	1.34142691311089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46062013-4	19.0872862236872	0	1.34277771208159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25548580-4	22.5048821941711	0	1.34278413943428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101973918-4	20.5510748840763	0	1.34050875073494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95990561-4	38.9154008748014	0	1.33750767076007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51734763-4	23.3493913481484	-0.0521554843920298	0.421517209636009	-0.123732752067389	0.901526878516601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96383044218457	3.88012825695814
Merged-chr16-55505262-2	16.1126592454515	0	1.34730859089518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13144789-1	7.88840826594573	0	1.39147008479472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125720247-4	12.2208222672394	0	1.34148346883691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14631779-4	39.1313428456608	0	1.33387762372002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10390924-4	24.5707241962992	0	1.34583784745898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62681127-4	18.1476842604849	0	1.34903019371449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43448741-4	19.5757356594923	0	1.34932576379336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60596171-4	22.8919905244172	-0.0351054834499866	1.08941291734185	-0.0322242217722582	0.974293240026272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr8-115614375-4	25.7379064315581	0	1.33608614815665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43553984-3	7.18312403775293	0	1.35747106810078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74867022-4	32.1757842818268	0	1.33426107560544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166493095-4	44.0428955589055	0	1.34161904965559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128392484-4	36.7333425655846	0	1.33581824326242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87448946-4	17.0377633876459	0	1.34934116149673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25590973-1	2.37708411195493	0	1.54614102889326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8640982-6	57.7307325836647	0	1.33815187961012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122619687-4	24.3623691368898	-2.32998312618321	0.506357339779774	-4.60146016091437	4.19539409815093e-06	0.00043528647351968	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10348034871524	3.69010297380563
Merged-chr1-156666008-3	22.478553464774	0.0496150963933459	0.554128585774526	0.0895371537709014	0.928655027705815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26324053676785	3.57755586431401
Merged-chr17-10359603-4	32.7143037265211	0	1.33493925735448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130821791-2	7.75083682252293	0	1.40771780786148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102309186-8	92.6647987787273	0.255386664978595	0.211017122233203	1.21026513050613	0.226177173246401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.37123813181003	6.65641657345362
Merged-chr10-7064289-4	24.307476209154	0	1.33700131132523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142794797-4	28.2551506345135	0	1.33616541051791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135659668-4	39.6742214402333	0	1.33637854543933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52903375-2	8.16389369482025	0	1.40270181771544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95213169-3	9.38079769639529	0	1.34772643949629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85498037-4	37.53879147739	0	1.34309275505816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-18007278-4	26.3978822779599	0	1.33885214775364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115331147-4	15.0023125004297	0	1.34703121795965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104111333-3	22.3180659089824	0	1.34818260976113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88865372-4	16.8940659741889	0	1.34520265989505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102245280-4	28.8055931310214	0	1.33748716135663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167735066-4	13.1013542851784	0	1.34370971781584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74847798-4	15.8293067001222	0	1.35554043534864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160044751-4	19.4122841232335	0	1.34387543502894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63176627-4	28.5857034112179	0	1.336645859191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105922034-4	18.7189213572868	0	1.33689742293943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-143162204-4	67.7052145743813	0	1.34201666074586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9302750-1	2.23260650899754	0	1.49577478342568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87635524-4	16.8283841993496	0	1.34585067697325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141766563-8	50.85495613997	-0.0805207931704547	0.236979790098962	-0.339779156428611	0.734022845793813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14318360248583	6.01710799374336
Merged-chr15-84994670-4	24.727616156771	0	1.33668299460352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67345673-4	17.6683052442695	0	1.34028359024702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121660888-1	2.07216492068691	0	1.58799624249888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103661838-1	4.18216855049691	-0.74402945570624	1.21813125552913	-0.610795800804773	0.541334773735152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	0.724326877898254
Merged-chr14-102911777-4	27.7821161859242	0	1.34339450958435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93124291-11	168.511069969255	0.973013120597938	0.158336352740271	6.14522883569277	7.98483138132797e-10	2.29654734951115e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	7.17078642655202	8.15642776179893
Merged-chr14-121423117-4	19.9335051346061	0	1.34017161485088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122902959-2	6.31028336626099	0	1.41483847300175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57606430-1	2.41868523797809	0	1.49208943929574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40585024-5	86.0811397003569	0	1.33596581572558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36712045-4	23.6500979421288	0	1.33788120719767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63815865-4	17.246978917981	0	1.34801623497471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76171477-4	11.7169778415857	0	1.34151724407233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3221336-4	35.6778857700285	0	1.34995781628633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58734339-4	31.4600101241517	0	1.33717557800277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47354269-8	53.1402295873459	0.0690888266025956	0.259376001094529	0.266365532320071	0.789957707822201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96327999847886	6.05236846261413
Merged-chr1-151620412-2	4.85316977358616	0	1.39617414316993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54218513-4	40.2256617082652	0	1.33248412339453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99388285-4	43.7773027916259	0	1.33154412549281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145112548-10	108.813894217662	0.267426339285456	0.189953056255886	1.40785489086948	0.159174042686731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41790242924491	6.75100906638883
Merged-chr7-31031918-8	80.5343754237545	0.224652837221942	0.166645371709335	1.34808926835235	0.177629672662599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.97696121064763	7.20724414864182
Merged-chr18-77944890-4	15.1039079307642	0	1.34171630431846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107101178-4	12.3230268019248	0	1.34668631178885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-63956684-2	3.14504155435805	0	1.43306718196645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71190804-4	14.4840952503031	-0.684180222012564	0.81051010834599	-0.844135335225827	0.398593784274041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8131505516485	1.06872581468896
Merged-chr3-97993744-4	10.351630068109	0	1.34353770861316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167370089-4	14.968439492138	0	1.34332364130077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83483653-2	3.94158888776221	0	1.38281522565413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103382421-2	9.19786405876916	0	1.35256648794064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35133181-2	3.15697787129872	0	1.47881402523837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98878015-4	21.8336246314061	0	1.34256179968502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185294821-4	17.3269815871994	0	1.34852257691388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8239699-4	26.3799586148698	0	1.34049329410242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30678267-4	23.5442086356883	0	1.34561004318263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44926437-1	7.53451104324224	0	1.35500775090566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53820872-2	8.2660055794547	0	1.38952357461122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38102689-4	22.427963632414	0	1.34808507375917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110970851-1	1.9103493999284	0	1.73625510378068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94412681-1	2.57151199123796	0	1.40632864428594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82799131-4	17.4653000881761	0	1.33938269272131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45589314-4	57.7882036106949	0	1.3372117086254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71048341-4	18.1481799903921	0	1.3375261268721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13524317-4	14.9640692221988	0	1.34942259099308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40295379-1	8.71754965407004	0	1.35199550229578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57927936-1	1.93277139271955	0	1.45612747659258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99050136-4	32.0636879872267	0	1.33915037028895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36562962-3	16.2745277421413	-0.659508431472689	0.519952682287892	-1.26840086403771	0.204654833232399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85662470721994	2.77348858355094
Merged-chr2-33755827-4	26.3873636477046	0	1.34900228781794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95128159-1	2.02435466175024	0	2.30942712442719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39451267-4	38.9145768208083	0	1.33856927043435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165982679-4	23.1981445970354	0	1.33845550668446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67138753-2	7.31283036396621	0	1.69215560775241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55421463-4	14.6576016901395	0	1.34337736551538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75504931-4	23.0595870975495	0	1.33572030205988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59287357-1	1.51918680398063	0	1.6811227498557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67696105-4	26.0329745886571	0	1.33663796793832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58232626-4	27.3563942223085	0	1.34164782776613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125411139-4	24.619442208484	0	1.33682014469584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91756801-4	24.8698696764021	0	1.33345842059491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82753243-4	35.450850532654	0	1.34607270975114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-190998298-2	4.27562232590914	0	1.41015284623367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116487691-2	2.44899184953786	0	1.53924458048165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86967485-1	2.04915286221042	0	1.6318706846037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18999593-1	3.22910895143977	0	1.42459491197582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159784883-4	19.4630136897023	-1.15328469259632	0.948783380612074	-1.21554057139188	0.224159984591821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	0.723581231604105
Merged-chr13-98819290-4	11.7973311924078	0	1.35297140770081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83407300-1	2.32441425392352	0	1.50853324820982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7134752-1	2.19296285442294	0	1.4556069309705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36365224-4	15.7003173922896	0	1.34890150985414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5814033-4	21.7457878726163	0	1.34362579515227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127597480-4	19.7413047515653	0	1.33502611709027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25052982-8	90.1216083363626	-0.967620762549385	0.214725656496515	-4.50631181358194	6.59641332693487e-06	0.000623607707893657	C57BL6J_F1_Control-BALBCJ_F1_Control	6.73797563089991	5.73423144984604
Merged-chr1-149954171-4	19.6846205929527	0	1.33919858573063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61409871-4	17.357797500325	0	1.34403252045874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57793175-4	16.6135587560654	0	1.34524566419474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81352484-4	44.0847233027948	0	1.33588744918349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91183667-4	15.8931964538171	0	1.34127558208816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85389173-4	28.733525285034	0	1.34104185718571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117486302-4	21.4462555802026	0	1.33848062564346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6016567-1	2.13362548486191	0	1.51899469386368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74529349-2	6.76102204600407	-2.21193916353079	1.28125453860882	-1.72638542684305	0.084278095793118	0.818815551245416	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0.376242425970964
Merged-chr6-134120908-4	18.3662951901216	0.278706286198878	0.707161053851706	0.394119959916972	0.693492475304013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	2.0616452534421
Merged-chr4-138068786-4	25.2162917064623	2.62698713395595	1.12354248466659	2.33812888235866	0.0193805633458569	0.313264360070601	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.897114879832661
Merged-chr9-114743651-2	5.85825212568058	0	1.39239838390381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64794132-4	16.1885844406458	1.29415668011039	0.940947444492789	1.37537615696272	0.169014856972611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.79973735522865
Merged-chr13-54215974-4	59.9247629892656	4.36768840579957	0.475126855717979	9.1926784462634	3.83179089243533e-20	1.04146160560946e-16	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8763281121661	6.61226081910782
Merged-chr11-117947157-3	13.1378917084423	0	1.35569852995307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152581355-4	43.5897700748799	0	1.34253903966397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-134690399-4	12.1856561567651	-1.46146922149051	1.06662108435425	-1.37018594787606	0.17062886366136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72807534006943	0.600815099743027
Merged-chr2-70964925-4	29.2311878950351	0	1.33460610031349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49943901-4	14.8657911003834	0	1.34476785310596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106353289-2	4.12988098858916	0	1.42594426241566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138775260-2	7.26848599046677	0	1.42794156327867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143035159-4	20.8799470696034	0	1.34449810130052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92837398-4	38.5113107149796	0	1.33639650296578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51526348-4	41.8507856591341	0	1.34107825125042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28099384-4	25.5001825252271	0	1.33578716904852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55955689-1	2.15888822031903	0	1.62767552778582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132735368-4	21.7097828138151	0	1.34007509149954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13393455-4	36.9673496575343	0	1.33399724343219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148402430-2	4.68044890363336	0	1.48276897650701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-52420751-2	7.89636795886381	0	1.39358457037628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63117728-4	29.3299901959783	0	1.33456168644013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104687500-8	61.2045895652674	0.696471926320571	0.273854826246591	2.54321581936787	0.0109837363011737	0.214155280342719	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4647819873481	6.21240963034538
Merged-chr12-102333289-4	13.0084507453323	-1.16875318447735	0.960173350111084	-1.21723143465931	0.223516173249206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	0.724326877898254
Merged-chrUn_JH584304-33210-1	1.91201652356088	0	2.14830501303912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150145243-2	4.62589870250432	0	1.4195116107261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82566295-4	18.5236527213692	0	1.3392753895049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84276811-2	4.77784565685294	0	1.44654587288247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167253693-4	31.3517730044633	0	1.33665815682862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39503391-4	31.0347430269823	0	1.34246832225891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9104145-4	11.9941579328695	0	1.34351285463995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129308028-1	1.94135175330189	0	1.45572322617965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101844201-4	13.9101685192372	0	1.34587878690282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66051797-4	21.5870597043496	0	1.34100307737801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68709500-5	32.5528886756391	0	1.33447771096722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84551665-4	13.8861669895549	0	1.35407024952051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113061192-1	2.35628097707844	-1.78369276090656	1.6370616001277	-1.08956972710582	0.27590272438074	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr11-79611156-4	30.7926368200407	0	1.33966010227257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113379120-4	34.8872114236641	0	1.3369156697124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117481894-4	41.4947816658984	0	1.33518296890457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49205593-4	89.7965448517219	0	1.33721570194937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54946726-4	27.9581758576822	0	1.34000417559081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140392859-4	29.3906824850707	0	1.33547954115571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155019868-1	2.73305458078512	0	1.44872503146913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107502222-4	24.9373204106718	0	1.33764189494963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124684742-4	95.1859330090473	0	1.33873046427345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152889982-1	9.57856107357685	0.48153401288914	0.828764125959619	0.581026612767023	0.561222517519447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5281157213591	2.77592473519249
Merged-chr10-99926767-4	21.2227693653645	0	1.34764098478029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109017331-4	14.2325539578464	0	1.34432426478799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10500930-4	12.0257627224499	0	1.34639642875511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16892109-4	27.2823392437417	0	1.33812301241139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142392379-1	3.3857820419197	0	1.46097552795553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14279422-2	9.21805991918222	0	1.43913478132998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35417754-1	2.38288862083583	0	1.46940462516379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10551053-1	2.49417053402521	0	1.41683552733263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5420200-6	88.2721732105625	0	1.33497315698098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22897369-1	2.77815075829379	0	1.4196182537506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50820362-4	22.0076488815136	0	1.33798471839019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63500580-4	28.6254626243841	0	1.34909748026633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139973094-1	2.87609420371557	0	1.44660803109131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144688427-2	6.03988203599569	0	1.38164915414976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86509608-4	22.3977787607379	0	1.34087125708652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55504308-2	4.55440534629584	0	1.48575556442143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7312870-2	7.02906659699169	0	1.4118030863189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132551942-4	19.7202799234277	0	1.34288937783713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33817700-8	96.9466930709465	-0.145962648887831	0.253228712604031	-0.576406393204195	0.564340524123816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.091370595058	5.98835166037358
Merged-chr2-128364359-4	25.5925952953894	0	1.35806274156898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12370087-4	20.6945250581151	0	1.33972123418937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76765219-4	26.1737758326148	0	1.36347745176426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3658033-4	31.9616047568133	0	1.33382182224753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91476350-4	20.7778064650235	-0.462697399831249	0.484230896597691	-0.955530518771642	0.339309479484197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71594332969903	3.0105434591428
Merged-chr12-32292990-4	16.2151063521602	0	1.34112833332122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31350084-6	56.40360299353	0	1.33587841595874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191093403-2	3.90566083518861	0	1.42313731247565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5935049-4	23.1195628088006	0	1.34806283243207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111127679-1	2.41904334971136	0	1.44597058067703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86229601-4	41.0499713050995	0	1.33398728676663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83600805-4	16.8071756397557	0	1.34293744956116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118663159-4	21.7374086802538	0	1.34168923297181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50099857-2	3.82408107236258	0	1.54595537302383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25484216-4	40.983934589197	0	1.33612247154078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62908063-4	21.2388773333447	0	1.3371323402884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19816438-4	59.9739644894464	0	1.33748140886159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89210284-4	31.2860102415081	0	1.34910793648207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97718662-4	25.7764371296612	0	1.33592506337396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63094438-2	4.75898254000094	0	1.47506322854173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42353387-4	42.3580432873496	0	1.33917624567649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128061616-1	2.01543361334918	0	1.50739773253901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105906610-4	25.5071284923888	0	1.37450666069924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55810420-1	4.17243130113429	0	1.64286262719293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110663051-4	10.3565197928548	0	1.34566582027588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95209530-4	20.0537100939788	0	1.35125308298843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34855203-3	11.7383412172563	0	1.35172593593076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73369153-1	3.46684920053144	0	1.48082070584237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116122901-4	15.871842233871	0.384710434550538	0.506269049032195	0.759893252976786	0.447318394942701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16176894445096	3.47289555571177
Merged-chr7-83722655-4	21.8401358723713	-0.0392251395342414	0.809876914408918	-0.0484334580185799	0.961370794941393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.58383754133375
Merged-chr16-49965780-5	31.7373242866358	0	1.33695088031557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125445573-8	139.217106641185	0.071547854643561	0.186271697210605	0.384104808808752	0.700900767458011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.93864759270614	7.01983263118536
Merged-chr3-135516999-2	7.85302662091394	0	1.38429654535862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57727885-4	44.7593201614998	0	1.33927252845243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183905521-2	5.40055560145278	0	1.4439241392285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36987346-4	22.2274152877525	0	1.34913706375024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-15214461-4	23.365865702513	0	1.34459496861211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142550394-2	5.52382528301937	0	1.50653921043456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36857762-4	12.5851334017223	0	1.34205436537846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127478905-4	52.8357568837249	0	1.34353469649978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89733844-2	7.40404244388102	0	1.41409933555088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94456681-4	12.1884023671472	0	1.34256437269365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102094675-4	17.0477111384952	0	1.34365892576758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148918043-8	65.8885403247984	0.0333621205059114	0.226771260221911	0.147117939342333	0.883038930399229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2432323220917	6.28342323814569
Merged-chr13-5887003-2	3.52743401635762	0	1.45615466604277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167777738-6	134.73388814707	0	1.33957206685937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61469541-4	36.287269970119	0	1.33803462997168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117215923-4	16.0646199929272	0	1.34576504137245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-84079807-2	6.6088313268128	0	2.31224890244809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60356363-4	14.6679508065006	0	1.37883774687794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99784976-4	10.6673140126638	0	1.35311540254656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4240441-1	13.2646259085826	0	1.36775854289753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78217884-4	25.7476585303596	0	1.33903261917872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55649584-4	56.1379063267068	0	1.34079242836092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82900268-8	138.328546072312	0.375615058827293	0.217231425047455	1.72910092886072	0.0837910329610112	0.817297104024333	C57BL6J_F1_Control-BALBCJ_F1_Control	7.50888085472164	7.8869231719959
Merged-chrX-107298972-1	2.13638382888429	0	1.43174996883714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17394508-8	67.8814382393946	-0.0564209441597947	0.205295147668852	-0.274828435062691	0.783448050953868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.519250212418	6.50951644515946
Merged-chr8-13674463-4	24.3078629531934	0	1.34138835209462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112012077-1	1.7975154865271	-2.57707351664326	1.48126667993717	-1.73977687579699	0.081898204420163	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	0
Merged-chr18-39619503-3	36.3465078323889	0	1.35057987750504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94298620-4	24.7056320132266	0	1.33829030379252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32595368-4	15.8884114848406	0	1.34101350690309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27783288-4	20.2521607958711	0	1.34317545620489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7939855-4	15.4044944795291	0	1.34984633311403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155235447-3	14.7403867458931	0	1.3438922417351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38470705-6	116.696026621361	0	1.33677216476818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9876993-4	41.0451586507751	0	1.33366992127901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148709723-1	1.29120464695334	0	1.86834264579626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98815060-4	16.4921791745932	0	1.34108889954716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43965138-4	14.3482034751342	0	1.36293308019363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96714295-1	3.04271253376328	0	1.48194823498529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191138920-1	2.54551661860453	0	1.42508451501782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36717692-4	53.3409226415935	0	1.3355592527005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118622073-2	4.64535858980072	0	1.45145366365703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164941228-4	19.7982014874889	0	1.33525142453994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-4817305-1	4.52939021546235	0	1.36787405695799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114806208-4	19.2166602815791	0	1.34211059584079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50470648-2	5.07494115883792	0	1.43324283240003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100085096-4	16.3209072777777	0	1.34068547856016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20782631-2	4.78989205342911	0	1.43633054916712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80772712-4	34.1517145803337	0	1.34194833643599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70001352-8	88.4511130074234	-0.0883955395035109	0.257386551011477	-0.343434958649294	0.731271263792354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62698486276448	5.65919135344439
Merged-chr2-35196408-4	16.8509026865447	0	1.34051087653905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36512402-4	38.9871923812259	0	1.34046725324817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-95914242-4	27.1569502437818	0	1.34026682381149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122231373-4	25.0856947462343	0	1.35401092080082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79531995-4	86.6369133621111	0	1.33343750625045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60758550-1	4.10117858529533	0	1.43108924059854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43364288-4	14.2380106926006	0	1.34397155528291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4318350-2	2.60366301908353	0	1.6342539875399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181274897-4	46.0491187775581	0	1.33671402590582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77912065-4	15.269392125504	0	1.3400876821117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52062097-4	16.2728218531656	0	1.34985579036784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87842700-4	10.8188221299553	0	1.34420591706036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39650571-4	23.622220484156	0	1.34033900980923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145276765-4	20.4692513550539	0	1.34095293088362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150835913-1	1.9884105187909	0	1.51478755779424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92865605-4	23.2105807224473	0	1.34187554291103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89280775-4	70.6868316297899	0	1.33986654767455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89801659-4	24.1773200801716	0	1.34849323436665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72254759-4	37.7759807254487	0	1.33970310049757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101977536-4	45.4682056186839	0	1.33711646496864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14133128-4	17.609614127547	0	1.34470890973496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10501018-4	27.0188760471037	0	1.33623694907016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27615604-4	12.4167630125971	0	1.33970991188452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53429447-4	30.3390927462064	-0.059867102582915	0.765379548161081	-0.0782188428300092	0.937653973526317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53609721040214	1.61141823534019
Merged-chr11-11749181-2	5.92536084489146	0	1.43003668622255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18898095-4	36.3736357223381	0	1.33682651461014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55381860-4	43.3321393857429	0	1.33441946145287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17903246-4	17.6286756839986	0	1.3615459573084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9878676-4	27.4942407483273	0	1.33981337093514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25470390-4	18.0732785759738	0	1.33854767905079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57389813-4	23.8967753856954	0	1.33552319150433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93268206-4	14.9440676753871	0	1.34755429586702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80837942-4	18.6262359291839	0	1.34205490893148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44366794-1	2.11421465746637	0	1.56263530815827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-118070338-4	29.668318326172	0	1.34561733210254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125725205-3	48.9504427230543	0	1.33814243064737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39519960-3	8.42794245770264	0	1.34950464080475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33120528-2	4.83311203936428	0	1.3689551884931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61695606-1	5.50794372900317	0	1.73704662829248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3147489-3	20.0156860531731	0	1.35419607240204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76607402-4	22.7188717678063	0	1.3430153182729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117431500-7	73.3567486201432	0	1.33371971363304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115035264-2	5.36318686556786	0	1.37838975155456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159953865-2	4.23240654953122	0	1.50017497641175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21022610-4	13.6752835191551	0	1.34344851103423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54492247-4	25.6047552028121	0	1.34904873761429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117272199-1	2.72051344743149	0	1.51072499939312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40968757-4	54.8512170990324	0	1.33671283474279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54998645-4	12.7844590733675	0	1.34306898483312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91476551-2	6.05842840952418	0	1.35448543249156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142340230-8	64.1302694081875	0.226640950678668	0.236680724047952	0.957580941964459	0.338274113049566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.34157215099616	6.59520555949885
Merged-chr18-61322737-2	3.19470466863941	0	1.46227493241362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3157640-3	46.8230455521489	-3.58221026767488	1.29900086049911	-2.75766581578592	0.00582156793900832	0.13746942293508	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75520908275751	0
Merged-chr13-105307905-1	4.28537168597182	0	1.48074400370784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-112140031-4	26.9767920473623	0	1.34258027042168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7847894-1	2.61240635784985	0	1.44862471550617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113716324-1	1.79206230763923	0	1.57128190330659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101262672-8	80.4513811654735	-0.0758471680961815	0.241365689672984	-0.314241714300585	0.753337462693618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.81473790680736	5.77284807545582
Merged-chr7-142398161-4	43.5672191218774	0	1.3363355842097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32189302-4	32.5719372822707	0	1.33798443350347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70330249-2	3.66867091947925	0	1.66369833888759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118981174-4	11.1928493226775	0	1.34348401665179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88515388-2	4.80219419023439	0	1.39496603620478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9750044-4	17.46941275261	0	1.34068143725848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49744528-5	54.9609747966099	0	1.33430529525209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49191837-4	24.1196481045844	0	1.34142543856286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58928556-10	126.826038735172	0.524709577016783	0.166982568973555	3.14230150034332	0.00167625329241248	0.0539487582724986	C57BL6J_F1_Control-BALBCJ_F1_Control	6.91402768626253	7.44997314733191
Merged-chr15-66816649-4	43.3491538562926	0	1.33839727726557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40958335-4	24.1831489462757	0	1.33609100856003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chrUn_JH584304-35963-1	1.71271444397463	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45974847-4	16.2394852418612	0	1.34655235290881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37143895-6	34.2716877840484	0	1.34573743830862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186585948-1	3.06046927560371	0	1.53340492662389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74370097-4	12.8277939634947	0	1.33967297075755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr13-17976089-4	76.5375534176773	0	1.33815023685492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3681788-4	23.5377528133381	0	1.335967296372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-42984257-3	16.7721998736686	0	1.37027757885263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70798761-4	20.3071977216832	0	1.33815775337274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90897608-4	32.4416980654848	0	1.34010222599647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5419470-4	35.0085704679966	0	1.33245337596592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37203954-4	30.488812328861	0	1.34251386692756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120897690-2	3.1677747429318	0	1.45881065098034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87959539-2	3.63253516707147	0	1.5107039732515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23233610-4	18.8692899206289	0	1.34955450233162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32358806-4	27.196357653515	0	1.34300927147675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5509958-4	57.7388987117111	0	1.33555253467821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57290933-4	29.1279844323221	0	1.34465273180581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86779396-4	22.2873135276739	0	1.33731321708655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70594405-4	13.7556890662999	0	1.3518667118696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117879457-7	86.2022825757063	0	1.33704050956838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34054552-4	15.4980753653708	0	1.3401865254757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-75119646-4	22.7133789535996	0	1.33381182163088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3147066-3	23.5935150683425	0	1.34803506328344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67702918-4	21.0461540444864	0	1.336833626944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46935055-4	13.2761016329616	0	1.34082875695027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70786077-4	24.2178016698314	0	1.3473790858229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11794440-4	27.1323763299602	0.513823707156512	0.766296215676418	0.670528832904328	0.502520732549346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	1.51226750748471
Merged-chr6-145303100-8	95.8179588311423	0.0620900553928699	0.205986023038591	0.30142848760781	0.763087773898235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.07925781719758	7.14559844949462
Merged-chr8-120104863-4	11.7838075928311	0	1.35119572148253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16470069-4	70.4365343758207	0	1.33965536721353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4586747-4	115.333627087616	0	1.34186389621223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117829061-4	29.4124503785323	0	1.34763132877814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-118472693-4	12.264772169074	0	1.38569826787349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58507082-1	3.41001342376701	0	1.38475541563371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3152232-4	19.6395099023091	0	1.35406793272903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38477093-4	25.3456175329848	0	1.33478146016788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8661440-1	11.8627022983326	-0.714860381251015	0.667171247247814	-1.07147960017751	0.283953838430407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13054261945269	2.56275234502369
Merged-chr6-29245535-2	10.7653063740827	0	1.35429641121602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45625536-4	18.4924906345049	0	1.3549017794161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62750580-4	12.4976409793627	0	1.38006132130741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11496970-4	48.2953770426379	0	1.34313252988034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57730071-4	18.7391147251099	0	1.3433717291932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113654817-1	3.3051050256833	0	1.4743246902418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166459141-4	13.1019512883568	0	1.34644234144738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77856787-4	16.0229998212826	0	1.33614419775772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46152501-4	18.2410165749861	0	1.33568368645591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132084575-2	7.44406170600145	0	1.42237730169259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39651921-8	53.1717018447937	-0.236682855664423	0.232443103753909	-1.01823995567966	0.308563935521614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76439195636485	5.50052237579292
Merged-chr5-21131365-4	48.1368595948903	0	1.33544809299178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125776988-4	33.5661125996828	0	1.33866113912458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166467340-4	21.4166006621082	0	1.35927027453033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115958583-4	21.8052866752124	0	1.34357034474478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57727550-1	9.60222165190715	0	1.3515649364544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83074420-4	27.7565289949486	0	1.33745260250057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38515414-2	8.91253538177471	0	1.36537132511204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106145511-4	10.2799470747305	0	1.36598733485621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74431722-4	52.6201708126093	0	1.33712467100281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3378776-4	25.8112619212169	0	1.33781487075254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80853821-4	24.1917732896479	0	1.33940464444001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5803793-4	46.8952426503668	0	1.33226574631437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99929405-4	28.359890907674	0	1.33710948979335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54494981-1	3.63476763591737	-0.290035904267862	0.892766448859003	-0.324873212516601	0.745277031466536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41264002021269	1.47418322843784
Merged-chr8-60883643-4	15.182114068657	0	1.34792562788254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26813331-2	4.89014633192999	0	1.44745876078021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126758553-4	23.0244549791377	-0.340822124491325	0.515760649528048	-0.660814516972547	0.508731271843494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33026084877685	3.06735584039599
Merged-chr13-49200870-4	74.8280935403341	0	1.34103457149527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25285218-1	2.04870345919952	0	1.61307937284267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40212609-4	21.7388635659235	0	1.34239829431312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35016516-2	4.1206848740242	0	1.59850039918014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87659448-4	27.6700618725564	0	1.33947960166093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35153211-3	13.0493176509471	-3.77376180988505	1.0462410361385	-3.60697170110377	0.000309791431802269	0.014968846614524	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76778958584463	0.376242425970964
Merged-chr1-182489954-4	30.3266497048858	0	1.33839762898588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45252638-4	28.701864519606	0	1.35585988243743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46486903-4	14.5271856077757	0	1.34015554268213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4082988-4	20.2165260510339	0	1.33892204258916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148483461-4	29.1200205949205	0	1.33350444935044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108990629-4	42.1775049400699	0	1.33703535417453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73371750-4	14.7348565315105	0	1.34517351905638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33984649-1	3.24377208580075	1.22413969588811	1.98660404649817	0.616197121940798	0.537764427721481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52572753666912	3.14702417854122
Merged-chr11-43395098-2	5.74781690576616	0	1.37578656037282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142440695-4	38.5388112596661	0	1.33810588205271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28260072-3	57.6064895461022	0	1.33305690671175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99090101-4	17.538278252758	0	1.34019941402991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16489985-1	1.86843478189932	0	1.49018010183854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40844381-4	32.6753281364554	0	1.33921998245101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19044065-4	32.0674715640681	0	1.33793179665667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79450374-1	3.11741941280501	0	1.43025350661641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116524742-4	16.7463167055144	0	1.35466149387082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73541029-4	23.5484942117098	0	1.34432141390839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79323603-4	36.1290240670767	0	1.33701267019059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90742251-8	106.57096549554	0.101567922297156	0.171720272947691	0.59147310072175	0.554203473305915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.91542849420914	7.01482244027016
Merged-chr6-120927091-2	4.31836829788212	0	1.83573299301517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52419449-2	3.62077840609915	-0.0330950429923623	1.16771290296187	-0.0283417635519978	0.977389571468528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	1.02186287315087
Merged-chr1-171380078-4	24.8683955583162	1.07850800530919	1.22127619327449	0.883099180388908	0.377182686968108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.904676873936758
Merged-chr2-13557633-4	19.8270981239041	0	1.33561042883536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114884875-4	23.8180665728796	0	1.34517441427079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20108421-1	4.39546646005128	-0.623867664828074	0.981306401072588	-0.635752160738148	0.524937972863396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	1.40298672487694
Merged-chr2-25228708-5	21.8866332063958	0	1.33796493605324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrM-3155-3	543.201755563703	0	1.39527882967625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99200194-8	96.6911579268796	0.40682389674434	0.210857678920435	1.92937671906106	0.0536841117482616	0.619446960416844	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06473722358421	6.52738522931115
Merged-chr8-111659257-4	24.3780219365997	0	1.34117861816906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58015370-4	48.7343145937639	0	1.33426744692985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27210445-4	18.4892785404736	0	1.34019854200683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120080878-4	24.7395564980241	0	1.3352967656499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33883565-4	16.4099017827169	0	1.33923772566115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53139076-4	55.1580606282087	0	1.33761647012414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47251319-4	17.7153381220055	0	1.33880998916295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35331532-2	3.86348148487899	0	2.10415985022825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18954154-8	61.52525934597	-0.256556046148743	0.254279072507938	-1.00895462461125	0.312996396089724	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68736259258093	5.45507119151833
Merged-chr1-154034337-4	17.8868912054226	0	1.33993233832575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115522710-4	18.2399702835632	0	1.34278405013408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8829004-1	2.00238989764172	-0.0329298768546597	1.64223554822333	-0.0200518597288222	0.984002002785502	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr4-122872150-4	18.3321538637607	0	1.34408811770151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88838452-4	11.5968162064186	0	1.35319192457778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134099329-4	65.0781515921197	0	1.34330442459994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69719525-4	40.859115420717	0	1.34764986366052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36932820-4	20.1987710279262	0	1.34428747652575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115468137-1	2.73194965250869	0	1.42706487319899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6291311-4	31.1648017419336	0	1.35642062849587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35568998-4	30.1229682895753	0	1.35208223770089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98324450-2	3.31118671661058	0	1.46976573456714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116603367-4	19.8471047450264	0	1.34028697842028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29854607-4	23.697468512717	0	1.3416250917692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10268641-2	6.08254986148061	0	1.49227749515232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-130387448-4	15.6884969777904	0	1.35416731061126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105017622-4	22.5214885376112	0	1.343102381099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23856600-2	6.70404914871382	0	1.43049644845867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43462348-4	44.1112387838617	0	1.33673541475882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125845461-4	41.5261371403926	0	1.33850187294554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5569274-4	39.7708824115343	0	1.33306231194798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83947761-2	2.45365982245234	0	1.6709706175789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129633425-13	240.803271059368	-0.116244136279117	0.151609417941702	-0.766734269264305	0.443239524143479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.23901994458088	8.10696309155515
Merged-chr6-100211392-4	18.3925790686635	0	1.34207824514325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112629492-4	83.8978106173704	0	1.33943076858483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27361525-8	99.3378412913954	-0.170465941065307	0.264905458704305	-0.643497275968128	0.519901481749505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77257493169637	5.63606110196931
Merged-chr11-101972249-4	26.7883139636802	0	1.34212124457613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90542884-8	106.862375643139	0.417449967507849	0.398775360707971	1.04682989131205	0.295178041473042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70552459427422	4.12547732532106
Merged-chr2-73496160-4	46.0570256275126	0	1.3428816933093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106352886-1	2.05333056973841	0	1.78301236336509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23993440-4	22.1553739198826	0	1.3390593257594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12578883-2	9.12683256503738	-1.03683391242702	0.942522205424686	-1.10006311412031	0.271304623750309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	0.662147012823607
Merged-chr2-117018617-4	19.7216797445286	0	1.34427511101971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107612314-4	18.8938005274961	0	1.3381034372342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90508150-1	2.8625772531593	0	1.47816266490256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63858674-4	14.6867852064293	0	1.33959997212302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59225105-1	3.62074185307675	0	1.43434860037365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88510141-4	78.6763733901746	0	1.34339245708644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114356655-4	37.8282334728427	0	1.33436211336797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7824213-2	6.56205091355339	0	1.37218968777851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53218302-4	32.5637431303079	0	1.33397876597607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37617569-4	20.6196471892701	0	1.34038072905122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84848314-1	1.88727665082784	0	1.69737630560654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120033266-8	36.9646932170621	0.402247890410596	0.282351823235795	1.42463358586027	0.154263146245889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86490015235839	5.38084720511883
Merged-chr14-55794058-4	10.4662392896186	0	1.34302794417086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27954755-3	9.30646342630456	0	1.3842653712593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53748810-4	11.7608729251186	0	1.34773802264597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98783513-4	41.9161723685115	0	1.33681716686416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151601550-4	28.0835366425169	0	1.35490452667912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30099545-1	3.46675512373917	-1.78435889555655	1.33749780324387	-1.33410230000296	0.182170332178248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0
Merged-chr4-88537558-4	29.7351654326628	0	1.33767918741356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124626639-4	17.8878914850359	0	1.34323397327372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147748182-4	40.2264454881392	0	1.34216279647747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134173542-4	16.5932970887098	0	1.3404749023527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-2690-1	8.1131455576957	0	1.38741165297662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125637133-2	2.08123751018963	0	1.76251159738127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152599513-4	29.4213333866847	0	1.33598597853997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114258947-4	48.1912763356445	0	1.33376421290654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153168338-4	18.4827396453892	0	1.3488970716278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116457212-4	32.2478613593467	0	1.33765744961305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153120304-4	18.4720698591295	0	1.33644140458127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5362202-4	32.9370052158364	-1.1420984803028	0.779155221166518	-1.46581637301088	0.142698319304707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63767395945907	1.17858215524007
Merged-chr18-76237529-8	45.4827077307367	0.511916297161782	0.236500891324822	2.1645427816113	0.0304227169327262	0.427214794561111	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65602322138328	6.19154610145
Merged-chr4-58613219-4	13.8550784606666	0	1.34623061423679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164867404-4	28.0748784657943	0	1.33940722899113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45868866-4	27.0061518568818	0	1.33846861252388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84555010-4	19.533513125478	0	1.34312331346953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24707310-2	7.58205038670393	0	1.3927071729772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96459387-4	40.9357378281667	0	1.33412046976199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54245283-2	5.34278247914041	0	1.39322921540285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95951307-4	35.1044357771087	0	1.33852777131637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97933468-4	16.1219664015032	0	1.347850047085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60624367-1	3.13406164159074	0	1.45955788914972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130787719-4	39.0167478084139	0	1.33434051257427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57769192-4	93.8408086193209	0	1.33433600759649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53217703-4	20.1922674051374	0	1.34323465084725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-71974923-4	23.0908855645305	0	1.33744259162192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86593654-4	12.8597032243365	0	1.34809770788038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13835458-4	29.7985346466997	0	1.33415324387216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97966130-1	1.53589336696022	0	1.66917368612914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43471459-4	17.1233918663233	0	1.38132518998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12270703-4	37.5620646986487	0	1.34461169800846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102895982-4	15.2369997880557	0	1.33974897685016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34448188-2	5.50960272199736	0	1.44882206417131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96623402-4	12.2757410647008	0	1.34749773569851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44436720-4	11.3911425565624	0	1.34955151264155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73031015-4	10.7681375992209	0	1.34706852313256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87679255-2	6.79354279916334	0	1.68959498324396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58640543-4	20.4898772847758	0	1.33991676657795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54727548-4	15.116585283738	0	1.3515985878781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4188412-4	12.4489247723635	0	1.34323566648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107359545-4	17.6538204688081	0	1.34129137831328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5952197-4	30.1929817054596	0	1.34171687415303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102827939-4	25.7084384534675	0	1.33520064663061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134073131-4	15.3977582393423	0	1.34770513392796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99461835-3	17.4503910031972	0	1.33711465827921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25282521-4	30.7278368666677	0	1.33492330774246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9635679-4	17.3553021831369	0	1.34965216968892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-104867758-4	21.9874833547683	0	1.3430203411374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75585126-4	34.1122533857963	0	1.33775277778683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153752689-4	14.4103844502197	0	1.34741548334229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60580101-4	23.268396250257	0	1.34074794120505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169123932-4	24.0875098022687	0	1.34111845970692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40073816-4	29.8967979876078	0	1.33364700611921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78651801-1	1.96040064566848	0	1.48761757167129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114045114-4	15.1266313263345	0	1.36461431605112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-85915199-4	33.1469650014015	0	1.33391677721971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31188877-4	39.0459337027399	0	1.33529621238418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103719037-4	13.1558192247319	0	1.34028901040323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122649631-5	40.6033627053422	0	1.33487103951178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44271836-4	21.8381991450996	0	1.33875317956442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172514179-8	94.1580352279674	0.607056741382475	0.248361107853584	2.44425041677762	0.0145153474657951	0.261394068179341	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59574401735184	6.2038015166178
Merged-chr13-5823413-2	4.9318499093592	0	1.50173002116438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98716190-2	8.41489233921336	0	1.3600600452755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120745454-2	13.0020678167587	0	1.37855495254506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137952451-3	53.9475537751428	0	1.33893630275918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9657246-1	14.9512047640075	0	1.34221488476438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76766476-1	2.75552499147057	0	1.4768791080457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-151587500-1	2.77580681147651	0	1.47616896074432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51925772-4	24.8182467793807	0	1.34037276596117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31106761-4	19.6696357061286	0	1.34154335986883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8643250-1	2.29602611964817	0	1.48079061290439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56566205-4	14.5504092755439	0	1.34397886919045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105825834-8	71.1878309437237	0.219076993297516	0.178191568454594	1.22944646145443	0.218904459463838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.49570940206315	6.72418620466953
Merged-chr10-26797493-4	30.4407925739563	0	1.33510902665145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93750051-2	2.70871541777708	0	1.43642270324246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124755433-4	19.2089626206309	0	1.33703949659064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101907949-4	53.4996253107973	0	1.33957974036676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68378130-1	3.63951186402506	0	1.49042432907213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12032705-8	63.7529603468988	-0.111842138306634	0.257200132191644	-0.434844793249557	0.663675088966784	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63862906456458	5.58061069145172
Merged-chr14-8112114-3	24.8510932993516	0	1.35199462932452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118646064-4	26.0825065287126	0	1.3385505500519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142524256-2	3.58702624729466	0	1.63358249759464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63780718-4	25.6264791757872	0	1.33520977720773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17012785-4	19.72455930675	0	1.33849842623129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-21567765-4	24.7952930019727	0	1.33900554129671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19784671-4	58.8931490450738	0	1.40075792060931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110943127-4	26.3339835644863	0	1.34099142699695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49301113-2	5.96292781450454	0	1.43181494103079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79214121-1	2.5170093054225	0	1.46674625562163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57774012-4	31.4481194674806	0	1.33427431752835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27374281-4	40.5101586595854	0	1.33810223724513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30690487-4	24.4905155043812	0	1.33911938731768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46447804-3	79.6678483895178	0	1.33823401745501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34782091-1	3.29491081627181	0	1.98215223848578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104146200-1	3.42846139716454	-0.689162840905295	1.43084805615339	-0.481646417969776	0.630057145746487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr16-93816609-8	136.843718461663	-0.244593678671936	0.182530485804481	-1.34001549162552	0.180240308497097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.5094502436335	7.28941675723082
Merged-chr12-99616392-4	12.5638051409816	0	1.34628929812768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31809968-4	24.4309789913006	0	1.34942676490153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19146424-1	2.01612684113409	0	1.42720675840574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53882727-4	21.5521847442022	0	1.34190613210337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107756449-4	43.3333929990376	0	1.33805519503575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34768576-4	17.6431888164605	0	1.34410118986808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60723365-4	17.4048492379306	0	1.34708616858907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35036352-1	3.26881020315388	0	1.47251710272893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94591761-4	14.5171426312327	0	1.33959088873977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4456611-1	2.99561341281863	-0.83488645023127	1.1466473040872	-0.72811094331739	0.46654567545181	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	0.723581231604105
Merged-chr1-148764886-1	3.31045266718688	0	1.49728597735729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32181976-4	21.6603750245391	0	1.34239916603554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66848957-4	12.7960993973074	0	1.3424809916507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21179338-4	11.6334219736342	0	1.35405423681439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68683487-2	3.22456815872931	0	1.40378745227773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-5015533-2	3.21722074827387	0	1.77958872636614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95849535-2	13.2737354603612	0.766378537067427	0.803919587562983	0.953302480650635	0.340436834994137	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59982791176663	1.61055102041193
Merged-chr2-118842008-2	15.2930654022067	-0.173054551652902	0.739163336193123	-0.234122207067488	0.814890106225565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	1.9872420510626
Merged-chr4-141273475-4	11.5988015218065	0	1.33929780710984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101257031-4	19.7671767210111	-0.0415602200729556	0.90578954896048	-0.0458828655294729	0.963403611119722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	1.13341594473881
Merged-chr3-97204044-4	15.0403055195999	0	1.34038053973338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121574085-2	2.69150644905936	0	1.57821723418449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8910559-4	19.3263671068415	0	1.33693080221445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55040226-4	17.3518007578597	0	1.33975823227941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110711070-4	13.0093438129985	0	1.34272064084773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125603386-4	15.2312175540591	0	1.35147831752109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57335878-4	12.0435567524191	0	1.34251107878372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33933478-2	11.4218707896223	0	1.35902199028866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71287290-4	16.9152389547195	0	1.34015240396415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120940499-1	3.01715320459662	0	1.42650725319709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127657315-1	4.48117026346415	-1.1665337689669	1.28319680828944	-0.909084063669033	0.363305753996214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63657599924846	0.730937814817307
Merged-chr18-25241810-4	15.1530483177598	0	1.34232666726015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28796792-4	28.4658623386108	0	1.33697265363999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86504240-4	47.7607883321871	0	1.33884788635804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74434762-4	37.0597021462234	0	1.33701090548867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61583098-4	27.3541130174477	0	1.33747499335189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38941234-4	34.209347074657	0	1.33732913877849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87002920-4	19.4114680704372	0	1.34479379337124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19979521-4	19.4008879644876	0	1.35105166349821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141372236-4	56.9225259555335	0	1.33402465193836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72725588-2	7.48561155227456	0	1.69768397075327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-73557240-4	33.3877195089309	-1.80679047890974	0.709250708743305	-2.54746376230081	0.0108509122179397	0.212242076193552	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70826009548996	1.18984215491549
Merged-chr3-118081989-4	21.788365253807	0	1.34090818998557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75985303-4	16.6383966338638	0	1.34269969142212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117019325-4	24.5463608713322	0	1.33693116879105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99090085-4	32.6928686806569	0	1.34771329550612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67244090-4	22.3884580894116	0	1.34451679630445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65663901-4	16.270083135652	0	1.34109395098156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72559002-2	4.81274424320447	0	1.41809767265271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31804589-1	1.60136140412017	0	1.81053333934709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63109486-4	21.4093666043519	0	1.33501784369069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4663025-4	38.855619516239	0	1.34112618166559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103383375-8	71.6612223704384	-0.522251581929266	0.205298689360083	-2.54386223096273	0.0109634316536693	0.21383608943732	C57BL6J_F1_Control-BALBCJ_F1_Control	6.71457071483949	6.16146482718088
Merged-chr11-3175298-3	17.4958941202323	-2.74016164981564	1.15434378510933	-2.3737829970264	0.0176068948259049	0.295471814255879	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0
Merged-chr18-57656262-4	26.8820580593148	0	1.33859033223923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122256861-4	16.2520086341664	0	1.34677281503314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108120886-4	17.166409527002	0	1.34190185193395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70829411-4	24.7237164394516	0	1.34343685499875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65113677-4	35.9546566172235	0	1.33772026364116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116767917-4	25.2464395250789	-7.36887963699729	0.981193277216433	-7.51012038922872	5.90730123908411e-14	5.0174216883652e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05766941120242	0
Merged-chr10-37204591-4	13.7180964902409	0	1.34489309868699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13684551-4	24.5321557282549	-1.31322033870154	0.981492014265366	-1.33798372234793	0.180901743067524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	0.841757702988201
Merged-chr12-8547470-4	25.5224091719854	0	1.33972433632907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4333187-3	12.0699552833295	0	1.36160956326643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10887659-4	16.6240667221379	0	1.34585617946116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28407650-4	13.0671628656672	0	1.34061270181661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49743773-4	17.8209818370556	0	1.34104228241016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36205612-4	12.5579596143206	0	1.34748529288537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45126584-1	2.38117115555644	0	1.54934328848586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46893125-4	39.1949046205521	0	1.33527891146727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127254236-4	41.1675675295018	0	1.34132758489756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10952592-4	21.4884921039948	0	1.34122564078729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65102850-4	14.8740565434083	0	1.34436615809632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9682692-8	139.209620210858	-0.135966261846158	0.167019129812405	-0.814075980391437	0.415601425114478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.08623839518744	6.95580608916826
Merged-chr4-53082093-4	21.6998561499963	0	1.343668080409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120163703-4	35.3063081173408	0	1.33557087552441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123610719-1	1.89849284882718	0	1.51665875938366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53995373-4	54.0800538625247	0	1.34470325861539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179842738-4	29.7732761772089	0	1.33796954290983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120528464-2	5.62302727253815	0	1.38552790316596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13551326-4	21.5441459463161	0	1.33734370271055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94687370-4	22.2313503449601	0	1.33817302299454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111103301-4	77.175666948656	0	1.33518942021269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36578694-4	20.0236006125261	0	1.34789046333041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27689623-4	38.5678905245424	0	1.3352034852773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171847197-1	5.12561992573519	-2.27796320481268	1.02791888466156	-2.21609237733063	0.0266851761954276	0.39285586184821	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18630051868871	0.662147012823607
Merged-chr1-16216774-4	16.4553871602065	0	1.34359032931027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69186069-4	30.9586509732935	0	1.33520672269149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79630385-4	43.6714856802428	0	1.33700170010893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6297841-4	77.9082880102734	0	1.34300315509312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29705419-4	21.5235412154927	0	1.33995427350939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94098525-4	33.4660554544089	0	1.33413113002942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62720372-4	24.6318928321015	0	1.33553523410412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180830005-4	35.0231464702594	0	1.33585044412516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22644156-1	2.28600238211153	0	1.50996896386266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77301495-1	2.56802157221261	0	1.53396882608479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51197283-4	41.0005156201722	0	1.33842025729781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50022624-2	10.2242027517984	-1.85106381411721	1.06227165347884	-1.74255220691915	0.0814118645690175	0.802151086841983	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77338015316878	0.465515277017237
Merged-chr13-116949717-4	21.4250781901278	0	1.3377980475537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122565600-4	20.5555779851885	0	1.35656387340765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67580002-4	21.0384417565952	0	1.33617685685722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62416911-2	3.49989316327124	0	1.54194385281104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95198074-1	2.66061794774096	0	1.44450506650705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142699477-4	10.0311143102127	0	1.34533303231368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82015310-4	25.1053385680611	0	1.34948577411712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114996738-1	7.20965291938106	-0.888507804111832	0.756254039074005	-1.17488007759901	0.240042697103961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55270831896051	2.1436861034703
Merged-chr7-68129204-4	34.4503121642707	0	1.33834437050564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75691796-1	2.70124457173333	0	1.62206919003353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116084213-4	24.3801497020326	0.0371177659656889	0.580085186549082	0.0639867502676666	0.948980776941924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31193049927473	2.05692240690225
Merged-chr15-78257857-8	89.0541022752333	-0.0481094910252719	0.197799461642304	-0.243223569092781	0.807832209490777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.36278693344601	6.32321722491921
Merged-chr3-105047039-4	71.2335186623484	0	1.33528847550748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5207000-4	27.8021947033894	0	1.33688697463542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55840964-4	15.3170490683956	0	1.34056189323402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63827955-1	5.59169006513931	0.909784543571814	0.73806220717161	1.23266648086247	0.217700222381971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12616253549792	2.50059417451451
Merged-chr6-134220488-5	67.295851170495	0	1.33313325432537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151598103-4	41.3238077561406	0	1.34403806430673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50793848-2	7.42508035181724	0	1.40766143772782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140206033-4	17.4122524779576	0	1.34717021424689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35353186-1	4.60293421981743	0.554495617825638	1.02507167926223	0.54093350644974	0.588553415103506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	1.30064958020929
Merged-chr7-126770992-4	19.9979312154251	0	1.3441023926102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140610339-4	27.4226842267816	0	1.33533690460043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101382417-4	59.5098134794613	0	1.34221364529748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8347604-1	3.42477212041771	0	1.40574075004097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126695535-4	28.3185481121649	0	1.34039545408561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13536879-4	22.8771750093918	0	1.34419795924851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57746448-4	35.7524570010111	0	1.33902281148751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-31834437-4	10.2084510400807	0	1.356498772361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81196822-2	6.2948001153538	0	1.35879987908799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109251983-4	13.8236066955673	0	1.34776818494416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125649620-4	27.2855006218043	0	1.33700209081864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73618489-5	107.258146396922	0	1.33824534069917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26962664-2	3.29193674907429	0	1.42640314993856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47760227-4	22.9657849584998	-0.441417831611629	0.541658725631623	-0.814937174873157	0.415108272587148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18272394346079	2.45914805170659
Merged-chr10-12869389-6	39.4468086652603	0.362577995368199	0.766863797430585	0.472806248753735	0.636351415551066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	2.00101204725338
Merged-chr14-60736749-4	37.2026763187028	0	1.34491834767322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-39324-1	6.84702150719829	0	1.39363790855256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92899884-1	2.08370710608936	0	1.59973932598554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138614685-4	16.9554765872685	0	1.33809281476985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53805952-4	42.0414503667117	0	1.33925563668387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78265210-4	16.1599814410175	0	1.33800517024694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86445069-8	142.348767570449	-0.452614905979317	0.164995135538686	-2.74320151622406	0.00608433343706782	0.141710872168079	C57BL6J_F1_Control-BALBCJ_F1_Control	7.52101910341159	7.05973920982127
Merged-chr7-113612827-4	28.0652303044958	0	1.33474489873173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90016676-4	17.1378661407381	0	1.34679354877275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120715403-4	17.4648916701546	0	1.34199187150632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149229171-4	37.0832210284723	0	1.34666294303656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86204100-4	36.1133544519831	0	1.33884938930819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60120860-4	20.8294649017944	0	1.33610577245664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77841698-4	21.1739434883718	0	1.34418106265876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54901050-4	12.9257020774349	0	1.35479040922788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45451512-4	19.5839855321518	0	1.33883458642454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20697266-4	19.7521664036347	0	1.33861995122091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10139510-4	29.2346645232835	0	1.33450632789308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33288101-2	7.33034283241828	0	1.46654395507298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7085295-4	20.9530487608655	0	1.34288753330862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59225303-4	12.2832513218928	0	1.34411909601373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85019075-4	37.3308174450598	0	1.33736394827337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124143831-4	16.9498363323809	0	1.340730801726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138613804-2	3.4732497484545	0	1.44358137573552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94696878-8	99.7553531427155	-0.203620163559578	0.174692556036156	-1.16559152936909	0.24377963423083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.93026422585269	6.72807579324937
Merged-chr7-92980961-4	15.0885361498913	0	1.34624521414316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88845726-4	21.8844602875273	0	1.33958203141456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-37924442-4	25.0077136695023	0	1.33685971309105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87031022-4	31.6630597872732	0	1.34000141904367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42938935-4	18.2667917316054	0	1.3382658180577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47320104-4	16.9049039940991	0	1.33928467580546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24341631-4	23.4207109281403	0	1.34187847523305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78332135-1	4.30491055886993	0.0403942424175272	1.23959302087674	0.0325866971959531	0.974004178297325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.859510663435501
Merged-chr9-7825017-4	32.6523584619195	0	1.3333592064166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86886610-4	25.3996051903136	0	1.33414700060786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61705802-4	13.9608435607372	0	1.34487516662939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39021036-4	19.5837153562597	0	1.33665799419785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98898216-4	38.0954465144307	0	1.33554306988333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79370811-4	11.1197642570739	0	1.35302289660389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103108599-1	3.3902008979953	0	1.41678386252789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25464481-4	18.8567591484945	0	1.3365120449526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109414998-4	48.6060010832886	0.291132760311037	0.503535961555398	0.578176699459046	0.563144828231548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36806638008192	3.52248453363627
Merged-chr17-67450310-4	12.1268057301677	0	1.35179348907412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53818940-3	23.8101584509972	0	1.36044054372036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120323249-4	21.3387414097222	0	1.33879238645217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68915889-2	5.53013992174472	0	1.85550188716059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118611350-4	24.4107246947897	0	1.34891125088441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143307523-4	16.7336583386856	0	1.34876278928683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32352112-4	20.6020764411601	0	1.34517768879308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100426457-4	32.4541353186976	0	1.33713029636836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26531741-4	24.503512909185	0	1.34178472102353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87561751-8	50.2880010991371	-0.132037349564732	0.240148675328711	-0.549815023480773	0.582446253151222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18220977987288	5.99528882527262
Merged-chr7-35065057-4	28.2545807097074	0	1.33648170409784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95293833-4	56.4809195633539	0	1.33592646178704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39511979-4	14.9502942680314	0	1.34211996259313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3894770-4	28.0250018830735	0	1.33552300935039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46831436-4	19.7632048459315	0	1.33629826960562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117020766-4	20.2204531201425	0	1.35471149599862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24444873-4	17.9761183678224	0	1.34191405737722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101292194-4	23.6594821644213	0	1.33729308453779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16114456-4	40.1187628260558	0	1.33350947174002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62543699-4	102.650326307215	0	1.33813444215661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80442131-1	3.13381361523463	-0.0342168387727644	1.17003419074534	-0.0292443067419828	0.976669744660257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.97908007631626
Merged-chr11-115072018-6	57.7202250541515	0	1.33646282107185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53285243-1	2.83851144781864	0	1.42155488380024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127605139-6	98.4594699928315	-0.0135613893587404	0.260142115014158	-0.0521306954008671	0.958424554818171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18872920377116	6.37298034213257
Merged-chr18-20741669-4	22.043460355118	0	1.34506678766374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92433652-6	34.9188522017679	0	1.35333330036778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69778174-4	18.552846669102	0	1.34294984883212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167774992-1	15.1302200564573	0	1.3512499933311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75659522-4	13.1064687956383	0	1.34109332760953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44392611-2	4.80407883612603	0	1.40944581810738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22299503-1	2.35070175019591	0	1.43022022142981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53594170-4	20.3359205804393	0	1.33785765820887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32202828-4	29.9326946001957	0	1.33950585792583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59974272-1	3.98878705425284	0	1.43452017592578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170120661-2	6.80024385177796	0	1.44849401954417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112398294-4	36.8151574957667	0	1.33742217545681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38375044-2	6.7276687087512	0	1.51635178768824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51477555-4	24.1794973049377	0	1.33554903419625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99242638-4	16.7116074077683	0	1.34622627162343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46497765-4	15.2537676347547	0	1.3461887449073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76767802-4	25.7691903944005	0	1.33915505153416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71327941-4	19.784763011308	0	1.33795544676583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59366389-4	30.9302276638542	0	1.33764139058857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60172000-2	4.32608213650198	0	1.43178886677731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51718841-4	19.1429827883708	0	1.33868315989495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45277446-4	14.9340190061046	0	1.34160637684118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36875084-4	15.9953645978906	0	1.34166362174112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170436491-4	22.4531116383378	0	1.34122023205131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96595786-1	3.2577292237293	0	1.38945531705147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84235512-4	22.1879770054605	0	1.35738869170491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7232967-8	43.6091736413468	-0.0536342775514657	0.284060987054178	-0.188812543769822	0.850239740171306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4626436501091	5.42718347871429
Merged-chrX-151929591-4	11.7063050591518	0	1.34475047176607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113645015-4	54.7412540060905	0	1.34211367296384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19508220-1	2.19579975956409	0	1.54457310968169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51952592-4	25.0814987866088	0	1.33415270223675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70402596-4	20.8728557632116	0	1.33559358332781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54383407-5	41.8376861943521	0.321292484476271	0.300357885179397	1.06969885037102	0.284754883983892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98262531445404	5.44468917487683
Merged-chr7-24601139-4	12.0848809236887	0	1.34599077289561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172401262-4	76.3702776097224	0	1.3389565750163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29945466-4	28.7669535522258	0	1.33362749968978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58475032-4	21.0992161030979	0	1.34311176279632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128082783-1	1.76263312076561	0	1.76621655517461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10663967-4	43.203800349475	0	1.33732251364261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73942409-3	14.6602354274839	0	1.3436032471685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8983478-4	19.2888455074601	0	1.34348962073635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72350221-3	15.6004653469367	-0.0431130721545512	0.528171900504275	-0.0816269705249157	0.934943353479196	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80345337275093	3.29780311287829
Merged-chr1-86492908-4	14.1931702590674	0	1.3469533341409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67334470-1	3.10755759852768	0	1.43700039088431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55368595-4	16.3146353336359	0	1.33969948629809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91999748-2	5.14591304689828	0.959432834891882	1.24735176909984	0.769175832078437	0.441788935554647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.39949824061849
Merged-chr1-40295017-4	44.5111333061249	0	1.33483659139768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50291889-4	11.0671152467438	0	1.34510429945189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119785298-1	3.40751790984211	0	1.4736750359234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59364496-1	2.13536624760748	0	1.63623126261567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7601128-1	1.82672777736824	0	1.47499880980907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45056018-2	5.69843344188776	0	1.44655844168782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103569989-4	20.9892570912517	0	1.34498689390192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5042685-1	2.04660726699532	0	1.46985423460754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75541155-4	27.1842031665103	0	1.33819243146541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6569274-4	65.9212518954465	0	1.33909505879523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103774868-2	10.1688408133054	0	1.39478209659785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27199457-2	3.43516646500087	0	1.58404188546139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110436937-4	15.8587138192154	0	1.34245041088133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-95945346-1	2.48967944455665	0	1.58155642061241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118666254-4	61.210535790448	0	1.34024736870537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111544100-4	54.7933191404443	0	1.33583620363332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91172402-4	18.4018931567576	0	1.34285329138302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83038864-4	25.233378738973	0	1.33726894849591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103323572-4	12.8128808011319	0	1.34124497690484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21406120-1	1.25083832226264	0	1.74369333317319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122301530-4	37.8512277017705	0	1.33802803299987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96709936-4	78.1512584208834	0	1.34119485150615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85730040-2	2.86192660680651	0	1.4716188629852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56465526-4	37.4531697857871	0	1.33615982205647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58745662-4	28.6981105547525	0	1.33418187946276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40324464-4	84.7430294874001	0	1.33552151451101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43880785-4	25.8501288213723	0	1.3447951316351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55553555-4	14.3013236284425	0	1.34417452470007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17653551-2	4.62121752331025	0	1.42048248446786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122009703-4	34.9157215180736	0	1.34533563056175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46792857-4	17.3939117257072	0	1.34288793390252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9129038-4	60.5424771334988	0	1.33527442225876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74017848-4	14.7719922458754	0	1.34217818155415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124818048-4	15.1071707826169	0	1.34211876225045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90234672-4	17.2232457167792	0	1.35240642695614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91522225-4	30.8571098411419	0	1.33475657006078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82796287-4	14.0372332120217	0	1.33787877226019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30856108-4	16.6194124922019	0	1.34345754437231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118404574-4	66.2237083302741	0	1.34043976063146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20133976-4	20.2103207200415	0	1.33728422954361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76183742-2	2.83509834220629	0	1.53724252321368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69331363-4	11.3322789658629	0	1.34292576949459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104223371-4	34.0202200125859	-0.0206226946567561	0.734179525432971	-0.0280894439879594	0.977590813230258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62128842389662	2.02922356684558
Merged-chr5-143818182-1	3.67608973749506	0	1.418578856497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51333467-4	31.3375339915882	0	1.33444782123806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137848556-4	27.0681909301401	0	1.34515057721666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102684890-4	15.6551732318443	0	1.33987829988651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102739048-4	18.5850136855843	0	1.37806934299501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137336658-1	1.68704741748965	0	1.61085314765917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3334257-1	2.38745064200966	0	2.42431047050728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31596693-4	38.0378392052626	0	1.34069510585768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116914186-4	27.0082543766282	0	1.33740745697593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17584649-1	5.20255600746489	0	1.43867628168992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4798585-4	28.4488256265735	0	1.33826978026196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75084005-4	47.5110755441866	0	1.34120542291346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140844609-2	4.81301532522863	0	1.39122395406919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105502577-4	30.5016237046102	3.89421368538862	0.543870808853004	7.16018146589136	8.05703351929991e-13	5.34112542775151e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	6.10652859877862
Merged-chr3-19460837-1	4.60975351546917	-0.960382676192329	0.885909088448213	-1.08406459389029	0.278336159953593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21017871366514	2.0616452534421
Merged-chr14-7997364-4	17.690558324136	0	1.34126361406677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8995675-4	15.462655946196	0	1.34158454333019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123335099-8	100.11249538335	-0.207397011303757	0.184285279154402	-1.12541279615715	0.260414151158877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78984326955138	6.51482458245005
Merged-chr11-115139067-4	40.3813195374698	0	1.33596648474101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32706825-2	5.12625848294067	-1.4836952840639	1.74959393209907	-0.848022650766652	0.396425356310348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr4-145267943-4	39.6154944727696	0	1.34845135311493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148804067-4	43.3664777924873	0	1.33869907598784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38396313-4	43.7280161978451	0	1.34165773855684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26140235-8	64.7718582967738	0.406248373751382	0.222290826924222	1.82755347745353	0.0676165933358586	0.717464453863739	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6605225302481	6.05926132622823
Merged-chr10-122687019-2	6.57229242214598	-1.21810450816609	1.32061553878955	-0.922376325575104	0.356332314193309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.41385117919798
Merged-chr3-116085671-1	1.7134560585535	0	1.60414024729743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-81454688-4	19.0331702190196	0	1.34137706524589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34451153-1	2.51179888199783	0	1.54470142146799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4066394-2	10.8167223559732	0	1.36287468636886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74493334-4	22.9716664126066	0	1.34478816011159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13208152-4	20.1447082893625	0	1.34498035804703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112344518-8	103.346375200966	-0.248915740037797	0.18679360652799	-1.33257098390302	0.182672632536327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.6930889814188	6.44989103066065
Merged-chr11-3159531-1	9.70925708526362	0	1.37891736389991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124025353-4	19.141423007848	0	1.33887911064923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3490578-4	21.9590714336826	0	1.33787539029569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93028845-4	36.9203673586278	0	1.3397859571523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110970345-4	42.4682555508154	0	1.33683771910056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37232063-4	55.8721186611142	0	1.33883072813338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172636463-1	3.68427780853449	0	1.41984861140394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131698341-4	57.208633984636	0	1.33682478984784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92847963-4	20.5740017168868	0	1.34403427584121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9490705-4	23.7941426490866	0	1.34260607228482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155059683-4	29.9543195548673	0	1.34034638858314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81845897-8	168.338005176417	0.268751682053046	0.186350719596445	1.4421821532809	0.149250993876216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.03748087209854	7.29710456931131
Merged-chr1-128705373-9	104.288624021495	0.424007168801075	0.193109643244615	2.19568097002788	0.028114786185293	0.406136503387282	C57BL6J_F1_Control-BALBCJ_F1_Control	6.47838354483454	6.91488436868758
Merged-chr14-60444385-4	16.962665260239	0.952592579866588	0.799002547227802	1.1922272127563	0.233172165874501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	2.39886785033251
Merged-chr12-69447445-4	31.5454092998166	-0.0351447928985669	1.08595288730668	-0.0323630917228198	0.974182495598496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr19-32292641-4	11.6882933833751	0	1.34739076197945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55362170-2	6.02553657684817	0	1.4399531331601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87122075-4	13.0189431480686	0	1.35020922567522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34539201-2	4.20775402914615	0	1.3947399480275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88128356-1	6.18865767128833	0	1.39936525564538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9873624-4	58.849709151435	0	1.33984473348134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120137595-4	13.3653500248972	0	1.33900159258497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72195308-4	18.9436635228668	0	1.33719570632681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73541742-4	14.0136864358707	0	1.33819020273619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24133349-4	15.3666492023457	0	1.33897440714738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56749602-4	13.7076039261637	0	1.34537055409326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63716322-4	34.8972159618854	0	1.33711585931393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-63864420-1	2.58559938084323	0	1.46353785543947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-39846575-4	74.3979978772629	0	1.37816843084422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72581192-4	25.220718380568	0.212153079901033	0.603743093195119	0.351396284764568	0.72529106923899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67113172082159	2.34314163205726
Merged-chr15-67413800-2	5.82314227524897	0	1.40053761071616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101766804-4	16.9298998492715	0	1.34177651360448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41801531-3	5.89334970405247	0	1.43579912923602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132529515-4	18.1148006530948	0	1.34828322152887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57589407-4	33.7243888170225	0	1.34294377571825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10859467-4	11.224561748857	0	1.34600576217711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85359322-4	24.031654246463	0	1.3382168318716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34995457-4	15.7158354511159	0	1.33720921677955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12012449-4	18.1295184480199	0	1.33753295673066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148918583-4	64.548075697891	-0.602741654953598	0.465611462171505	-1.29451635950402	0.195487122190028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59102064112776	3.23211434677695
Merged-chr5-16356049-4	26.5965567482607	0	1.3403837332388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12841656-1	5.10049566971844	3.27659414207603	1.22558542120443	2.6734930796223	0.00750658249843931	0.164735695612702	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.91178115877367
Merged-chr16-10498327-4	26.5084172331672	0	1.36178421474436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27577140-4	14.8001806248283	0	1.33967854770993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83328214-4	15.2964334525261	0	1.34336244573925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105595723-4	16.2585052485423	0	1.3366856798788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-49074923-1	4.95098148441538	0	1.3960837471328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141269254-4	31.5992894460041	0	1.33969507665911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77084269-4	46.1727885299092	0	1.33488998333383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103890981-4	19.6426595530719	0	1.34130810263418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117852619-4	18.1794039028027	0	1.3493482339981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102835439-7	59.7820755803953	0	1.33280131301181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79071796-2	3.94196911904216	0	1.52267786232185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162625081-4	38.8158947180806	-0.488296456888073	0.288375698967067	-1.69326492709719	0.090405050906335	0.854220087296621	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59945392457258	5.04916951445586
Merged-chr9-64089271-4	23.0276328080493	0	1.33836247825946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75164557-4	25.6977114976891	0	1.33717356789502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140794242-8	48.0871976844641	0	1.3378829478497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96502190-4	20.5725534755045	0	1.34108752415048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76579971-1	2.60107448465069	0	1.41909521179399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116588157-2	4.57072463600276	0	1.44257675998423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46443286-4	14.4925400543116	0	1.34693588660266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96633796-4	27.5532470979574	0	1.34066229542877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51988324-2	5.65385475725802	0	1.46134231340965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70789478-4	14.2271474417717	0	1.34488297517177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61265534-4	35.0667560622553	0	1.33664637043541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145110818-8	108.612067241398	-0.0867629427760364	0.201763317942586	-0.43002337422269	0.667178638230983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.51075505638028	6.4161273038314
Merged-chr2-69802975-8	59.3732570998585	1.17499037325056	0.257802143375322	4.55772150637222	5.17115418191406e-06	0.000512953960172749	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79507956873204	5.98900045479751
Merged-chr8-122407823-4	28.0139231636925	0	1.34957917607698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17688904-8	54.0927104060147	-0.106395672130903	0.236500343215507	-0.449875339224993	0.652800330237972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.93235762055301	5.86150935649891
Merged-chr10-24635543-4	48.4363549171546	0	1.33426436269291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91765336-4	28.7312132010678	0	1.33789564314886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87304549-4	42.1324307080541	0	1.33352325471234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-77335745-1	4.01980584150124	0	1.43333789285571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50252858-4	22.5104707288539	0	1.34618008816923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117960116-4	58.6969833245349	0	1.34067864284782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80092632-4	17.6769290124731	0	1.33964092229533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108836421-4	35.5896060471867	0	1.34211026234697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167753455-1	5.90831404852656	0	1.37190500510994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88142197-2	5.89976724122446	0	2.25516595680696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-12949673-8	134.671087970826	-0.188486480395927	0.21713203783536	-0.86807309632882	0.385354318096495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.73685909569358	6.52701629310408
Merged-chr4-129032860-4	26.71235921962	0	1.35241772670207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131106155-6	32.179333983127	-1.60513415681532	0.401914486845506	-3.99372057825905	6.50445114270864e-05	0.00410256979688198	C57BL6J_F1_Control-BALBCJ_F1_Control	5.1179262682702	3.29225558173546
Merged-chr18-46404822-4	48.208767686139	0	1.33655573287236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83634703-3	8.45821958059137	0	1.38518505240418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117996897-8	96.1895250419332	-0.087852703119771	0.16476205231879	-0.533209570306816	0.593888517388852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.13841154684913	7.05285707720372
Merged-chr9-78533473-4	26.8592355282216	0	1.33618269126793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94226215-1	2.76952542843105	0	1.56694437735149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114879849-4	20.9266429515436	0	1.33675212044678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33345208-4	13.4217386420089	0	1.34605821440738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46791819-1	4.37028077425511	0	1.37061001509748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44011590-4	14.6716348248185	0	1.33888160037886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52624300-4	15.8804125780724	0	1.34287862287776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3981525-4	33.131696232472	0	1.33989130317084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94138662-2	4.14500496828073	0	1.46936879595477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134066299-4	22.2295908346258	0	1.3368049469806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43642790-4	21.2784624018093	0	1.34198673129396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16216426-4	30.8390065823548	0	1.33607458604407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44927199-4	96.9996818375725	0	1.34216112823987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57423145-4	36.9082708922045	-0.628260696131115	0.537854710976225	-1.16808625695738	0.242771973254572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31443673173493	2.24631017169283
Merged-chr1-165675330-4	55.550292917871	0	1.34074948699966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77442645-4	33.4495087981437	0	1.33496056956715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38763719-4	19.9889459980078	0	1.34901251879643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16323161-4	23.3865884720146	1.47005441429382	1.17595983055112	1.25008897081533	0.211267048264862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.815004392037195
Merged-chr8-128435971-1	5.93900946697931	-0.941473894653127	0.923035707388623	-1.01997559478676	0.307740035401244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70287015972834	2.10306136624384
Merged-chr15-100041819-2	10.7955263759712	0	1.35096495470366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80326195-4	21.0276426971427	0	1.34980408062285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103234765-4	20.1657780050688	0	1.34098060263778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-55090-1	3.15740888910562	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36234644-4	27.1392860601525	0	1.34124243498288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59265824-4	28.6360822593339	0	1.33777138188944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16088593-3	57.2473432311307	0	1.33476561676615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52513054-4	28.3649142271131	0	1.34437597353538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35445695-1	2.38164744013741	0	1.53108999157235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37715370-1	3.37365864323267	0	2.04154027665749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47314098-4	39.7596881895431	0	1.34152582680921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125370234-4	61.4039935815236	0	1.33705865593389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87830836-4	27.6027745534612	0	1.33820977087139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13511297-1	2.51892733514597	0	1.53468427907715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69441012-1	1.62451744792169	0	1.79561243018198	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32637493-4	31.0424220524697	0	1.33457613430329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95799829-4	19.019302578861	0	1.33896857148425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91041769-4	53.809152328851	0	1.33819702862768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82825686-4	30.7104607094923	0	1.34612857981059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16215536-4	53.9347265006787	0	1.33803674973982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73818956-2	3.58418031211795	0	1.61410276265782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27194126-4	40.8875545654604	0	1.33484563597531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112866693-4	23.4800407278837	0	1.36536197419075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41768567-4	10.6969864098149	0	1.34629976885187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3711333-1	2.21758822941093	1.75635119377825	1.52076526122545	1.15491275251971	0.248126156629163	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr1-191849649-8	129.256594001676	0.481716794447021	0.173588242670084	2.77505427232509	0.00551924966231008	0.132987984216983	C57BL6J_F1_Control-BALBCJ_F1_Control	7.16534135592652	7.64652352108517
Merged-chr12-86800935-4	21.2863699887697	0	1.33761055010759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32173960-1	3.74969269430752	0	1.43491821356769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60852219-1	3.73292691089475	0	1.38612112706224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103486857-4	15.9016302020774	0	1.35461348709627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106408105-4	28.1288082149405	0	1.33616425859243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110503583-4	33.6540420297265	0	1.33560317356984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30729997-1	2.49766708976129	0	1.52518176494852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85366597-4	38.4670839382863	0	1.34310447048977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr16-93780827-4	14.1948937152641	0	1.34016472697711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78137342-4	25.1491008599801	0	1.34931737100888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107402289-4	12.2673004231991	0	1.34424049902962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-69089329-4	68.3601089753593	0	1.33792844864462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43767902-4	21.6165905948214	0	1.34129846106913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70803722-4	29.6647086633197	0	1.3354111686172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5952608-2	6.48956437297343	0	1.36884669346199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-65446-1	2.69163449082898	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28027114-4	12.7724007468226	0	1.35487023613305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49929515-4	13.9475972761436	0	1.34640251867761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90383850-4	17.9468081991135	0	1.35132329393951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10982325-4	14.1608834204664	0	1.34660567786798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139295822-4	19.7163828104839	0	1.33758546943012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr11-32881817-2	2.98662457147086	0	1.49767606815034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82762832-4	22.3770711401649	0	1.34389243861574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9913990-4	29.2170956827838	0	1.33424233214261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58408191-1	2.879563058909	0	1.41907058132767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55483160-2	5.36910259965356	0	1.55421717863393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19277026-4	32.1954708577156	0	1.34919515511266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123032916-4	16.8140910683147	0	1.35481135550221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr8-117050967-4	19.8016203167625	0	1.33970414311595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118879300-4	30.6597641968224	0	1.34348520890348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87130845-3	9.76190447952845	0	1.35875858885205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111540174-4	61.8021774164081	0	1.33741941897015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-37165424-4	16.7786718575195	0	1.34722707446593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109191138-4	26.6550485217543	0	1.34532511156346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4257724-4	20.0801516835849	0	1.34336366360972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38753693-4	15.8295825377119	0	1.34037166327499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66356375-4	18.7597083219282	0.70912782774112	0.521478360556663	1.35984133068177	0.173880140151085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55093367249462	3.63904901492452
Merged-chr19-36006475-2	5.63058986530919	0	1.42133976410717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38377031-4	26.2082015522124	0	1.34753451237056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112018750-1	2.3349390482679	0	1.71485115615455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11728128-2	4.01387022016255	0	1.52751012136271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24766236-2	4.14179246152232	0	1.44043293880945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23882683-2	6.26200818623177	0	1.36208429744748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30778489-4	24.2131589683565	0	1.33963612605883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136147025-4	16.8550721308182	0	1.33636782909555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20803233-4	14.6439658555784	0	1.35574826454148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82812534-4	19.6492750522022	0	1.33835020332943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67271858-4	19.5116721608649	0	1.33630788484218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37959480-4	21.0587900962446	0	1.33825884014132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr2-116972757-4	14.1915138468917	0	1.35945555876272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110164959-4	22.3635715859736	0	1.34741884179574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72014743-1	2.30909062575425	0	1.49247376226125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106785296-4	29.5949252161381	0	1.3355355163762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117417173-4	33.7416730245635	0	1.33638643734179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13946696-4	39.1914613262433	0	1.33874068609981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34953875-2	3.4041932680831	0	1.71094911176223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15726635-4	26.1911426179387	0	1.33901153493551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173680353-2	6.90049622603002	0	1.69941488895604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165987450-4	12.8930736037485	0	1.35052927430748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50842059-4	39.9632952446568	0	1.33434565581192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8334648-4	12.3757817640556	0	1.34138135688306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99354073-4	19.3813473128792	0	1.34007173035375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-26365616-4	14.3527081558636	0	1.34642099986323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103443950-4	15.3201331968746	0	1.35635305655251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148489105-4	18.6783870298405	0	1.3363540461359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134262171-4	51.9004608353915	0	1.34269988846566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92267390-1	3.07736716581227	-0.0483828387794287	1.3759799010889	-0.0351624603972342	0.971950195971446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.55634759613363
Merged-chr10-85194703-4	9.45069298422581	0	1.34508672656235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33245105-4	15.4312102681739	0	1.33790172828062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54812903-4	22.8281144013365	0	1.34117242971259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8890241-1	2.00572394041279	0	1.54067777540258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66223798-4	51.0714143493273	0	1.33527993012003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128204232-2	4.35238479397139	0	1.38118069520869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67500149-1	2.8569836817517	0	1.54136567513132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39714187-4	17.9502441093118	0	1.34990417459535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13361855-4	55.9201967775932	0	1.33408286610474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31413905-4	21.7742154367031	0	1.33614161901224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr2-167376314-4	27.45544869805	0	1.33823232596758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68712709-2	3.87744865736685	0	1.39708001894469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35557055-4	12.917395571091	0	1.34105342836256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr17-10431033-1	3.17203492645702	0	1.47188228112749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14932076-1	3.23717067616492	0	1.4701151655934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39420999-4	47.1130170859199	0	1.33518137355834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr13-47232342-8	81.6604348178841	0.327466428625496	0.211730395965543	1.54661982816481	0.121954945571783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.50460984567132	6.82201189914111
Merged-chr1-106375206-4	19.316408450277	0	1.33577689252577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr17-81480942-4	13.528647733675	0	1.34645030461071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr12-85381837-4	24.3756608797121	0	1.33570433163707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37276097-4	20.7498201664914	0	1.34428973444729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57013437-2	7.47058912191835	0	1.40773309465651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37633155-4	17.6496672255292	0	1.34276803313156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr15-24589211-4	37.6078103000283	0	1.33747179301246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr15-88129135-3	26.7584176515877	-3.24852350863332	0.500162259938628	-6.4949392803686	8.30669069927316e-11	3.15764615190063e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5536431213215	2.4926420445116
Merged-chr11-97415514-4	16.1223531121468	0	1.34990260291338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr1-191443741-3	11.630751527232	-0.0350942420013399	0.747653091215526	-0.046939205379709	0.962561681141758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93994840877528	3.00393455483044
Merged-chr4-123921303-4	31.3976155190283	0	1.33515536522296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28600979-4	28.0019822806423	0	1.34041069090532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
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Merged-chr3-38423563-4	15.3884851019592	0	1.34132658495167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93340834-4	32.2190674779837	0	1.33707164793561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21017309-4	14.5238417151492	0	1.35102734636378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98792533-4	16.8440774466005	0	1.33941629544234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100609022-4	19.9420657037166	0	1.33999020964297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-31661-1	14.488419930359	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120127705-1	2.5999432625167	0	1.43216368071764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49000993-4	20.3681715248473	0	1.34359741641417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33782141-4	23.1598342928543	0	1.33457885484597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86690440-8	80.1001282969136	-0.412866110775138	0.259922166807391	-1.5884220874516	0.112190926200881	0.975773849176587	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92284089709123	5.47850782194914
Merged-chr6-113330762-4	15.5294149371149	0	1.34678106965625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5159538-4	17.3175455089	0	1.34124532095305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5442911-1	2.18346180909459	0	1.45340946982301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59799617-2	7.98774129896597	0	1.3995583807491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98754221-4	20.736242595596	0	1.35958690731554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95530003-4	18.181788186066	1.2479187957823	1.30010496758331	0.95986003199571	0.337125663978862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr14-69861595-4	11.0868225828265	0	1.34387509166753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22814166-4	22.664362610162	0	1.33529236500322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9131820-4	37.7218321714442	0	1.33874489777149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108387365-4	14.0735461653027	0	1.34125330638382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12445200-4	18.0404211111127	0	1.34026366537787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5189853-4	42.0136938254034	0	1.3368830715297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39967892-1	1.66701408281175	0	1.56706105445031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115623723-1	1.94750402209192	0	1.53960693863876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90023103-4	50.1534384079325	0	1.33994730876913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88257204-1	4.61361692017824	0	1.40492706640579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65536265-4	40.844392939716	0	1.34096256058897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5793983-8	80.8047669143427	-0.959949186326971	0.222130647629032	-4.32155218819749	1.5493539467046e-05	0.00126424010234336	C57BL6J_F1_Control-BALBCJ_F1_Control	6.80161670158034	5.82583133278821
Merged-chr1-180972369-4	15.1951402130257	0	1.34824086393269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43654707-4	18.702732932276	0	1.33679233810447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80202780-1	2.86925132329364	0	1.41126448565641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23418388-7	39.2906920918664	0	1.33464145002636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146222160-4	35.668607095275	0	1.33611259945897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3147985-1	4.09115440985586	0	1.39367674254701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32528293-4	31.4114064333172	0	1.33313582778074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6877117-3	12.6353126131204	0	1.37370805951749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-95745239-4	32.62448397138	0	1.33518098499579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89164919-2	3.50459840601835	0	1.48290223661827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51460826-2	5.01303930462128	0	1.45465188773661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121269556-4	42.0961381772053	0	1.33726498780011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75089773-8	75.6194728917476	-0.152790378160255	0.189292906184866	-0.80716378251934	0.419572128789242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.78771734704345	6.61659092742493
Merged-chr18-88820300-4	30.3700877876051	0	1.34398777368767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-144248426-4	20.077919667027	-0.904893652156166	1.12005368290501	-0.807902037167717	0.419146978488037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	0.465515277017237
Merged-chr13-101664166-4	30.2072061809459	0	1.33618071690888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-26220010-2	11.0668278088113	0	1.3473062516562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85468861-4	54.738713564801	0	1.33629828004976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51455985-4	31.2435592935051	0	1.33803188207432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167949387-4	27.4994591215513	0	1.34129980998031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167885805-4	18.0682744856264	0	1.34970991973008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144981301-4	21.52624587823	0	1.34901395761047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184728889-4	24.2650789372566	0	1.34712987457063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39171883-4	17.0611247971396	0	1.34238970500657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77375159-2	13.6891361446019	0	1.41877951843979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28389263-1	1.80607636602973	0	1.59624903091941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122924425-4	17.3775345205069	0	1.34841826656805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81983741-4	19.7689482975262	0	1.3361434092936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85706124-2	7.43894161623905	0	1.39888444961738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97772315-4	78.9176171218446	0	1.33855873240947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3739601-1	3.38642647660625	0	1.46097386028698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129500893-8	162.974126600529	0.0792034392239944	0.238170304356441	0.332549599069497	0.73947429390985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.48844848914478	7.55603055237859
Merged-chr8-103577350-4	49.5784599585869	0	1.34159653817654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80402165-4	15.207571617079	0	1.34758871938895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34319410-2	4.56421271188459	0	1.48118600194975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103249711-4	16.8497070722874	0	1.34289165637382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17018086-4	32.1825797989943	-4.34441416450774	0.763184602986542	-5.69248140948717	1.25206234855444e-08	2.80085832119633e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	6.71573924321118	2.18927216584514
Merged-chr4-99336328-2	6.73908990020048	-0.0414742086289651	0.817032551102625	-0.0507620027782169	0.959515169210651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67810954354252	2.64756916089956
Merged-chr10-25126239-2	5.11621731366703	0	1.41507490610468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71193210-1	2.40923082057336	0	1.5907736681786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5939545-4	24.7785582348347	0	1.34029585623299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118507327-4	18.9278992521653	2.42067412711991	1.13956717202434	2.12420486176325	0.033653016875773	0.456081860969869	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.17788344834821
Merged-chr2-102724738-4	20.9186421731548	-0.472399826538014	1.19455533640688	-0.395460814698593	0.692502835101297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.600815099743027
Merged-chr13-37874694-2	3.4799195498957	0	1.47592788518773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52434239-2	3.11344194492394	0	1.45235248757752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34906993-4	44.3180978479911	0	1.33756052907877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13383720-4	18.5898214355679	0	1.3424679657019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23272329-4	41.032255711535	0	1.33542229300792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70258026-1	3.41649886910795	0	1.43093491027079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44030398-1	2.23559083873959	0	1.42782606746878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43915367-4	21.4687166208025	0	1.34241418128605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94544802-7	31.2617184292543	0	1.33792272090599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110424354-4	22.5388261422874	0	1.34052000782365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75363417-4	29.1417903789198	0	1.33955935469013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128779637-4	54.6374820907772	0	1.33707349372797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34331486-1	1.91613066287986	-1.8424149537514	1.50222146714476	-1.22646027503071	0.220025515609897	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0
Merged-chr17-4908347-4	28.8102457721203	0	1.33980495242894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-27098198-1	2.42610088364932	0	1.56873383531754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89255642-2	3.20540022056597	0	1.46685976460587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14234235-4	20.0306371424619	0	1.34603586161838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85354535-2	11.9997363217757	0	1.34909472424306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101050926-4	36.5483207540205	0	1.33930685128481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75222759-4	113.659319820739	0	1.34026639957972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46932056-2	9.72244256194751	0	1.38782221696148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-123190219-1	2.56643274275953	0	1.60060442631211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137688302-2	7.40232421607087	0	1.40600440930055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96857266-1	2.74046988264748	0.511116938859151	1.43872566431444	0.355256704969326	0.722397287124058	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.724326877898254
Merged-chr3-126744586-2	6.8883704475067	0	1.39891871892413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102521557-4	20.1101254677942	0	1.3413240293108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53158839-4	11.8418726681264	0	1.34224257858499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171055410-2	4.43102299027341	0	1.44218052569171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44130648-4	18.5175941111996	0	1.34682412296586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117405471-4	20.6127098979758	0	1.33969864002916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52967682-1	3.11109611744911	0	1.42193021929882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41615612-4	17.8059014711272	0	1.34263958921033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5804475-3	12.0053543151068	0	1.34456746430828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14206995-4	28.0375245525637	0	1.3349251928088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36792802-4	11.9999791433103	0	1.34358417005485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38425875-1	3.75466578750405	0	1.53698146290533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7917370-4	22.2685338308935	0	1.33698508300512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123430021-4	21.1908248481863	0	1.33725376588368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117250445-2	4.18733087512285	0	1.50084142317575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63828632-1	4.7891261409582	0	1.38516580677778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46464677-2	4.24294467925857	-1.89404026596419	1.30721216639359	-1.44891572665635	0.147361118663543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr17-45585453-4	29.8463126662269	0	1.34281178468269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5446587-4	29.9654768893105	0	1.33738833635859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45635406-8	83.9020465292014	0.278948333536779	0.230868280560649	1.20825750882439	0.22694822717154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56296988895094	6.83307953491827
Merged-chr7-100992220-8	89.6299336328667	-0.319021768267578	0.253278035990383	-1.25957139165313	0.207824021167802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.17672570888197	5.84252889009548
Merged-chr4-140975644-4	38.2048456790206	0	1.3421610338907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145270344-4	39.6323259611447	0	1.33858268128278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102502572-4	18.7609949330375	0	1.34186798925996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3491373-4	16.8382251603136	0	1.34217649180956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43737165-4	32.2049380684597	-2.54943184326552	0.36377508643091	-7.00826400256996	2.41293193510618e-12	1.2859271280435e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05179823455461	3.61904898893577
Merged-chr13-112787184-4	15.8903907628552	0	1.33861546614276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130839584-4	14.2925069008631	0	1.36746418422222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151210532-4	15.9949596877421	0	1.33959196383942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143149134-2	4.03998223801102	0	1.43572987014957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21067341-4	8.6297145022603	0	1.34908289960258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34771370-4	19.5483997389738	0	1.34036950804947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146172429-4	11.8074325437218	0	1.35369770681886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85284414-4	16.2695468056552	0	1.33938031280905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62056594-4	54.1243048783848	0	1.33520702968364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9814622-1	2.70696933153104	0	1.64194972163314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118478420-4	25.5232621343274	0	1.33886981126908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20830252-2	14.4834556658096	0	1.34983828623026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77032559-1	2.94416415338097	0	1.43127399541232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7769869-1	3.73142521508722	0	1.38868912980519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52603001-4	43.8361358995712	0	1.33786573862027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60716881-4	18.1959278168373	0	1.35831570417164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68382571-4	20.9980597933137	0	1.34183542872154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122921037-2	3.10053150142717	0	1.42820812087466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70084799-4	19.0913641034945	0	1.33663745885282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-104995835-4	18.0197071437935	0	1.34571964131156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53616080-4	22.0219873325453	0	1.33498123519506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67611099-4	17.8272723779128	0	1.33884549789099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30953577-4	48.3176784459663	0	1.33576955820658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106540409-1	3.42125404440233	0	1.41887507100745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119925444-4	14.170712154942	0	1.35547021954542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118804817-4	52.8291344291088	0	1.33855307705909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109456997-4	9.71566372265053	0	1.34690632704415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103258361-4	17.8745061472076	0	1.34219860024994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120938031-1	2.63278495777654	0	1.53957317392807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34943915-4	14.295490232054	0	1.3524395936397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24779721-4	26.3213238831622	-3.44508133532783	0.501034476656591	-6.87593667868308	6.15838525516385e-12	3.0158888656347e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82616938282155	2.07970494261888
Merged-chr15-53259422-2	2.69578985176927	0	1.53721490301614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46535343-4	15.8793096857178	0	1.35214373326989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105637102-2	2.74783720682215	0	1.5485673471662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69156649-8	104.9953707593	-0.238293992204108	0.208144059395252	-1.14485127702637	0.252270769990046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.84604017190273	6.58946976777152
Merged-chr1-182944903-1	4.98167672803081	0	1.3899638504255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74841899-4	17.231627746265	0	1.34340498409474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97241486-4	18.6951089927627	-2.03666302111453	0.886576696684534	-2.29722146852143	0.0216061390354734	0.338371683039268	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137280208315	0.723581231604105
Merged-chr5-118463757-1	3.28827245847509	0	1.40900775842059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31235601-8	129.687488471299	-0.133045750554479	0.168364920541402	-0.790222512662678	0.429397830672237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.86086810299928	6.75117160192697
Merged-chr1-191111452-9	159.69984994733	-0.15904887112694	0.20176429442156	-0.788290473212415	0.430526818877287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.80831041687587	6.69358985378253
Merged-chr2-153238099-1	3.45901342562855	0	1.55075346515154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145252771-4	19.3183808932381	0	1.34851255588208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128360749-4	15.297782274205	0	1.34891049497974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55129511-4	38.2630511983321	0	1.33713936486458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58355452-2	3.10272373315517	0	1.45070180048593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117079512-1	2.51224711451604	0	1.47570077952533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100325225-4	25.451942545678	0	1.34248749383608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65516890-4	15.3021146957775	0	1.3503234006076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75872435-4	31.6928717541384	0	1.36369370305813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31283252-4	29.9335479358809	0	1.33823312050193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82958521-8	156.32942873005	-0.525004757008699	0.166309359110813	-3.15679622491289	0.00159512775911944	0.0519218861424992	C57BL6J_F1_Control-BALBCJ_F1_Control	7.32460089761024	6.81216991761594
Merged-chr13-52636383-4	47.6425201350538	0	1.34154447429391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81146497-2	6.45561473448001	0	1.44849125538051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122310931-4	16.2267495317518	0	1.34029805339888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9341092-2	5.0052296786406	0	1.36108042742246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145254571-4	37.3879047040222	0	1.33852018882801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55450541-4	51.9436026563897	0	1.33628078688378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22547782-4	19.7456672043233	0	1.33845524527749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141182150-4	21.5165343632862	0	1.34096372902586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34189450-1	2.49384100418844	0	1.52487479476337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103333102-4	21.6769778493062	0	1.34104730647428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127576527-4	16.1137096477107	0	1.34079875165675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72603097-4	22.0569793893973	0	1.33513986950163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88149189-4	15.5106807795649	0	1.33953582524842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80046819-4	63.2015998283685	0	1.33418997113797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36083116-4	33.2422587948756	0	1.33942108113887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120832039-4	18.2101575048619	0	1.33876828876341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128983924-4	38.9081941628468	0	1.33635457876999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77279762-8	81.7848264557786	-0.152306117226363	0.205935973316661	-0.739579951833702	0.459554910163129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.68838971670145	6.55153947005613
Merged-chr8-95037208-4	26.1397253273531	0	1.34145961834654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90048931-8	75.1093847462569	-0.107616983315992	0.248662461231646	-0.43278339152181	0.665172140264715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.46968428336473	6.30644561897983
Merged-chr1-80648159-2	4.90327666499179	0	1.48764120370747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40329280-1	3.75712696590235	0	1.39470949602554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101659208-4	21.2054446735008	0	1.34357272400297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33951109-4	23.0857274280678	0	1.34169396439295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41444544-1	2.19187767544691	0	1.47463833185009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-139861854-1	2.82454697272978	-1.31699667217126	1.43274970159571	-0.919209175688168	0.357986172677384	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.465515277017237
Merged-chr2-32969574-4	20.1485702482298	0	1.33621715186195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23446223-2	5.93005976160094	0	1.35668079274722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134557059-4	34.287624452068	0	1.33876455123333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99333138-4	31.9835816939215	0	1.33717428960487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66144968-4	17.552267137097	0	1.34287897121976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140964871-4	17.3536668594016	0	1.33599114109579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83859254-4	12.3996174016054	0	1.34920632752468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111237457-4	15.5104586112181	0	1.34231598034183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31997071-4	22.9424720748437	0	1.33836586608932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71008529-4	26.0848438541917	-0.891054131313985	0.983016764658076	-0.906448560543036	0.364698479833935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.723581231604105
Merged-chr6-42339378-4	18.1364134112133	0	1.35156399351264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66147801-4	16.9829281366314	0	1.34437783139654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65837248-1	3.96381067995135	-1.39388239516063	1.18814221536329	-1.1731612404113	0.24073115194631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29043377261676	1.25298535761957
Merged-chr3-105036520-4	14.0832769009188	0	1.33977501553533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107776400-2	2.66504367094312	0	1.51144361238824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181860876-4	50.1032278499171	0	1.3393119592388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5286092-2	4.88925962041276	0	1.47222030012458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12091203-4	16.7101970110534	0	1.34336475578156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133856275-3	6.91939605215697	0	1.38632442226552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-13679-1	1.91488088524153	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22212447-1	2.61603304855516	-0.550105007268027	2.19558260465065	-0.250550813302494	0.802161414097895	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr2-120348301-4	17.8735487595879	0	1.3348026132101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97192865-2	4.02908907947149	0	1.39825131463568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96854667-5	34.9736926635322	-2.83215642979189	0.702598338598038	-4.03097513074562	5.55459213918986e-05	0.00362040856228084	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20899432370262	2.63180215825415
Merged-chr8-92840044-4	21.9530041335405	0	1.33721631064583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12013438-4	36.690039883969	0	1.33562835219427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36495616-4	24.4386354836495	0	1.34089037001463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117237342-4	17.0981444550829	-0.0341286636805566	1.25361608876421	-0.0272241749180165	0.978280934053706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr11-93821746-4	59.5337417796613	0	1.33674008470885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66041054-1	2.01519430264065	0	1.53941258487492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135907504-3	5.98381999946664	0	1.40003209489167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34887525-4	50.1767247561388	0	1.34061712954278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-114140035-2	4.28630422867378	0	1.41804527949156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65541820-4	44.4055392433354	0	1.34060522411228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63129156-5	82.6000975514762	0	1.33531437521068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70374515-4	13.9429075563833	0	1.34336818373027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35752305-1	3.79570544555839	0	1.41215715047415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17854693-4	60.0805279006217	0	1.33495213036959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102379168-4	13.6157014474528	0	1.35463017602452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121637033-1	2.74061353259846	0	1.4479413002051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4335805-4	27.9645200622771	0	1.33517716855354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59744672-5	52.1668183248176	0	1.33286663717663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-65650851-4	25.8222464086292	0	1.34245302072129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83597213-6	34.6060694064577	-0.0383289845383685	0.634038581558012	-0.0604521328089899	0.951795538566244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79248826455399	1.77006617524958
Merged-chr6-100800624-4	27.987708358863	0	1.34155741023876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89555179-2	9.27053030687481	0	1.36546257846652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112950979-4	16.8865601702474	0	1.35616010455062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61978063-1	5.48199379423885	0	1.42945217836383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53378822-4	25.6163634607433	0	1.33748640701011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59245763-2	3.21592227287077	0	1.50433664462619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87541140-4	40.4274393611037	0	1.33695404453127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86787421-2	5.34211472421835	0	1.50795537817978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76588209-4	49.6413030694983	0	1.33902498797678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165134028-4	16.1616649595476	0	1.34031990650193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4526503-4	25.3424397077255	0	1.34149177869036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165737671-4	15.9413064138751	0	1.34337629432451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5819860-4	17.0990953044578	0	1.3480841787084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84174507-5	44.7048866813995	0	1.33857644461294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25891775-4	20.0764456382315	0	1.34236962480709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70215006-4	9.70362521341745	0	1.34694775872149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25557382-1	2.47673729972973	0	1.44265789914292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90737616-4	17.7693822539142	0	1.34000316118018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183320303-1	4.04016873718009	-1.30959880887381	1.37309940393099	-0.953753825196206	0.34020826746835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0
Merged-chr16-76225322-4	55.1175433540459	0	1.33896244673474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39687531-1	2.60000894570602	0	1.52930348948265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73388754-4	24.7105001243907	0	1.34216880017901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81514383-4	35.0081730030027	0	1.33798812878244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90882373-4	10.3253971903222	0.62452512955666	1.36556146917298	0.457339448757946	0.647427079333373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr13-113487282-4	64.0234730589138	0	1.33596327388361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6390853-4	20.8213671737052	0	1.35146740051432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95628668-1	1.91856615141479	0	1.67488925549699	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127243018-4	18.9276910986397	0	1.33979241428817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192753485-8	79.3029252073736	-0.183225421397503	0.243063660277741	-0.753816597627706	0.450959356237278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.58927481749756	6.40782632179118
Merged-chr7-101027806-4	21.2917453278286	0	1.3401433582476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32652435-4	16.4151784662172	0	1.33954132776169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88824731-4	26.1287157645869	0	1.33543197193557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48546676-4	100.549971094944	0	1.34245488454133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191125988-10	100.168439784281	0.251567058423545	0.200047766866602	1.2575349495968	0.208559991774016	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.86268047459854	7.19094446875641
Merged-chr11-16999594-4	22.818534830102	0	1.33554477911495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-130092643-2	10.5636206296639	0	1.34731647831856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153237279-1	2.2014401499034	0	1.51245897850014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32224896-4	21.0133740291196	0	1.34149519083815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155051128-7	36.6184493463061	0	1.3319390010919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75063632-8	75.9960014571909	0.180711630224305	0.253128459572229	0.713912732411428	0.475281143658171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69009397589654	5.86479244222819
Merged-chr15-8340813-4	19.3838637597298	0	1.3366352857261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6740160-4	26.9051070131454	0	1.33522010396809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136609046-4	13.5896401475549	0	1.34986657097449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39552638-12	329.554654277582	-0.02892788369034	0.179348009319766	-0.161294701848424	0.871861295938885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.59572706088082	8.56987499231797
Merged-chr5-113634394-2	14.2643487077452	0	1.35141308458852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111457964-2	4.49713278355392	0	1.43096823696956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63130828-4	23.9798005367165	0	1.33390688632507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46618544-4	42.069291387521	0	1.33916430562579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86225250-4	47.5372657068637	0	1.34079603347992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116682718-4	25.5762788374445	0	1.33928288012647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50446661-2	4.56411327921296	0	1.39541612185679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112739196-4	15.7353720726249	0	1.34275633614222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87301757-4	22.315795311458	0	1.34164784972704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108580696-1	3.21267743189462	0	1.42396853094603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145340870-8	214.617404993046	-0.124641739251954	0.175420407337457	-0.710531580354733	0.477374554482708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.83005746465125	7.69698004220992
Merged-chr18-5990109-8	121.947863563695	-0.178763350023434	0.193612793096684	-0.923303399348026	0.355849116882606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.58841973141215	6.41767314994191
Merged-chr1-125450689-2	4.14436676389269	0	1.5516668401932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13437242-4	35.5228842694683	0	1.34338897087559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100677946-4	19.5738569210525	0.218666435372057	0.533755978468892	0.409674915490996	0.682044433506641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89010511185031	2.81476308096013
Merged-chr5-139061277-2	4.17942538625637	0	1.4792179631962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68718261-2	9.82081502659136	0	1.37266741932953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-194981056-1	2.11781449439024	0	1.43662674252932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177681384-4	33.3662596128954	0	1.33704006014663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7337327-4	15.7586922610331	0	1.33758054740261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52366554-2	5.79961746808017	0	1.39606621332493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145234007-5	57.8914078060822	0	1.3448947464598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57463030-4	16.694860719455	0	1.34304067230036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69309291-4	15.0688241107655	0	1.35160585393703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5850005-4	19.4079891374246	0	1.34299043234013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167860713-4	19.9656958061431	0	1.35277436588384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70489890-4	49.5836344686804	0	1.33917500824785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182908550-4	44.1070321602569	0	1.33490685905805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58046761-4	13.5069202381356	0	1.34340729368842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102748791-4	22.6118259958883	0	1.33970894259356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65568938-8	119.715831540061	-0.197048751094902	0.180596141676641	-1.09110166621234	0.275228149759193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.02312711400157	6.85027878583591
Merged-chr9-104269465-4	17.8049579069054	0	1.34209603839259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3156953-4	71.6086502140446	0	1.34185060420729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79520108-4	26.6044358918559	0	1.33905234023346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100626810-4	24.5770202685767	0	1.33424304413356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150674051-4	53.4046060557225	0	1.33232720826217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131426654-4	12.1099128031754	0	1.35154029503068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141993811-1	5.51892336810165	0	1.3585118498473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49840278-4	71.6260824070605	0	1.33411532432894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118795205-4	19.616303071238	0	1.34585370918546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14189281-8	62.3646402647552	0.572865725263292	0.247841270700408	2.31142183722813	0.0208095659149277	0.32950398880558	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67658451719019	6.23495755652428
Merged-chr6-83381826-4	26.987040936425	0	1.33412372598758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87512648-2	4.04062364422837	0	1.45316682804506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4208906-4	24.949815680371	0	1.34407743576972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41605132-4	23.1840081358892	0	1.33995643045275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165405449-6	68.9882516418048	0	1.33372493125266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120567676-4	26.0173331505138	0	1.33511799317383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83649243-1	2.09979386340629	0	1.59284890792798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22398589-4	16.2151440747213	0	1.34599717804054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33247888-4	39.8557364043167	0	1.33675044741824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121596710-8	54.7823510963616	-0.214640123304518	0.269251249985705	-0.797174101572097	0.425349924898761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.58121947008911	5.37622182602665
Merged-chr10-50634369-4	24.6100406300635	0	1.35540888977661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134425536-11	98.1997252110633	-0.0589595394364798	0.192434727437179	-0.306387210986786	0.759309844613163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.82794520337707	6.7649361005243
Merged-chr3-48101053-4	20.3539957294274	0	1.34102298967585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13230816-4	18.0634235494428	0	1.34328015565988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50756879-4	16.4018631653294	0	1.33671690817669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101186494-1	1.98582471852483	0	1.77031796517586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-41387-1	2.96810213533158	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47068041-4	71.2364145518937	0	1.33733235007095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131053378-4	17.1808212727615	0	1.33834492865563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76524838-4	22.2467484393038	0	1.33969558871934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62187230-1	2.76310139275177	0	2.44647872696733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64191740-4	22.4405177168491	0	1.35056106049458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117231814-1	2.59701447891065	0	1.52354829625918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-190174835-1	4.60224324029598	-0.157278285475638	0.886019796245521	-0.177511028694956	0.859107003151339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78917914819163	2.0906146763627
Merged-chr9-118658817-4	61.4390576807922	0	1.33842150387697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71864177-6	46.1562336436522	-0.137115130528858	0.475356037714619	-0.288447226184545	0.773004421845759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62843519411555	3.60299711564543
Merged-chr5-3420630-2	6.08743006777098	0	1.3574647942773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127596921-4	61.0916220159801	0	1.3392330879859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85980185-4	16.458609923953	0	1.3385540056708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103103109-1	5.95969963600492	0	1.36129949404273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20004768-4	34.9358911412484	0	1.33669042203434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81694142-4	17.3341471105919	0	1.33781052601005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171114083-4	37.3051827657878	0	1.33799262020157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118277658-4	32.0357024004712	0	1.33786836712958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14650949-1	8.76798307784083	1.97618222511476	0.965147326797044	2.04754462893551	0.0406046396312083	0.51283169277715	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20997209872237	2.89892374609951
Merged-chr15-27670334-4	41.86874658492	0	1.33950771478178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30925234-2	4.14248225034436	0	2.09543266586832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50452624-4	13.3152034379731	0	1.33811868980876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73122663-4	39.6637119451962	0	1.33749340601704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57948162-4	38.7770515108208	0	1.33724832722489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35507341-4	20.0525199089704	0	1.34345576726972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50069178-2	7.61455959189685	0.500869079949524	1.25457294739698	0.399234720459055	0.689720262212327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0.97019877533161
Merged-chr6-15816677-1	2.29422761942077	0	1.4567556585086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47790940-4	19.6410511275144	0	1.3391661328035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30435551-4	18.3341842999136	0	1.33451907894733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26437743-4	34.7412461070268	0	1.3374987311681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49083286-2	4.93540268669563	0	1.43552925183251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96743421-4	10.8023479113616	0	1.34860292283764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46941440-4	44.3378693139201	0	1.33703497150438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108832574-4	42.5953414301035	0	1.34052299208769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47171357-4	24.3371732906876	0	1.34508271635999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20967330-2	5.75970397894914	0	1.39437112035282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73645781-4	33.48094396692	0	1.3419596431682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95887946-2	8.10162031267445	0	1.76108567866813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95151288-4	25.3066565718672	0	1.33850061335766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75473631-4	13.6343996537206	0	1.34205030695959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8580024-4	39.0917211583066	0	1.3515162947507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117872724-4	43.6309661931672	0	1.33899100936156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71952754-4	13.4932388563382	0	1.34956158870928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45270231-4	19.2104421454989	0	1.33676037346253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29845257-4	28.3389751246868	0	1.33748925482615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63082285-4	40.7649744369058	0	1.33452711096132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39232835-4	10.5167733420824	0	1.34228248454388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39552147-2	3.54704214029252	0	1.41111703469088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123564681-4	11.2277017730947	0	1.34374504461872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17728847-4	28.1510800985229	0	1.34090354486745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167375378-4	72.5637717618576	0	1.33669466753051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95887578-4	20.9640409950088	0	1.34398836915042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81788827-4	15.0921757310713	0	1.33908858631006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141065317-4	9.73067944596288	0	1.34858183991089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103897803-4	11.840222747805	0	1.34018267561909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100737847-4	24.8876825106732	0	1.34042385483945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85154147-4	9.31625773916748	0	1.34748037280603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95552216-2	6.0688268191733	0	1.35810346314796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4198944-4	27.1083081961741	0	1.34192419594191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16199695-1	2.0640025429979	0	1.55866475013757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31349212-2	5.22180871277999	0	1.43113038582873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71377640-3	9.07438265808448	0	1.34672177288355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54908827-8	41.1790595980861	-0.175933312086317	0.332593521789336	-0.528973959383829	0.596823514452333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.22317064093585	6.04296933356119
Merged-chr13-30549028-4	13.7309772280593	0	1.33893090043753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97446813-2	3.97645952024327	0	1.43567359589131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131517734-4	11.9520404537859	0	1.3460185972756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-20280-1	2.6485014748686	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29463834-4	17.4156889723583	0	1.34008759465456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73459845-2	3.4850369975056	0	1.41844491197964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98283299-4	17.6075216719111	0	1.34062604180105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22727303-4	16.9341883315932	0	1.35382038466147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91242728-4	16.5176105956891	0	1.35120389348923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54246642-4	17.793326060534	0	1.33798966626196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117339564-6	62.5358256751921	0	1.34060928529675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167167473-4	14.2104982614081	0	1.34273709301751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88458277-4	16.1598354706088	0	1.34062628313203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80323929-4	17.2960363355565	0	1.33966843340176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153501991-8	42.5959768192427	0	1.33394750134551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181247386-4	37.7051863453738	0	1.33986559808874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76615455-2	9.28916626125209	0	1.35951042333963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94262116-1	2.71827950996751	0	1.45728769671582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20997346-5	22.2123015217451	0	1.34167914679773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84715209-4	34.6801075443546	0	1.33468560167135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35657011-1	4.98010210022791	3.56289441312673	1.33015374585003	2.67855834278004	0.00739398496592434	0.162724546057766	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.04909488009165
Merged-chr10-81297321-4	32.1365671987422	0	1.35239641558198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114316611-4	20.5659174142892	0	1.36254361608113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48718016-4	20.3525931556475	0	1.34341580544041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21031993-4	19.5137070347352	0	1.3671674180561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43789141-4	60.8478755388417	0	1.33565399165614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180393262-4	18.6893485203474	0	1.33765805859591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94183341-4	31.9411479281149	0	1.33486458582407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117866856-4	24.8059202590399	0	1.34097598818612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49183953-4	22.7198751749176	0	1.34425372989712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135631640-4	34.5814938012851	0	1.33318726534057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35890704-4	32.9505921903056	0	1.34532032180367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-105065002-4	25.1596957599278	0	1.33573138147315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32869676-1	1.78618137138019	0	1.93216931865071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120011268-4	30.375875630076	0	1.34236108879515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121376573-3	25.6796983040007	0.272544437483768	0.528959491481362	0.515246331473327	0.606380896754439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23310585692455	3.30692279337202
Merged-chr13-18785904-2	6.71576972899156	0	1.36030187750434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27160024-4	13.900431445593	0	1.34208107434325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49159133-4	29.184131211195	0	1.34374544160001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120835919-4	15.7598328191645	0	1.34216617412616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124652943-2	3.53684151905312	0	1.45194626716387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71237603-1	6.6143649510301	-0.127126183438424	1.0327358723218	-0.123096511746628	0.902030673496734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	1.338064021838
Merged-chr14-32798153-2	5.17116861622973	0	1.42648887525221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65630242-4	38.688919703533	0	1.33654325437414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9058703-2	4.39950865966742	0	1.43986443234932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166481100-4	29.6420665915435	0	1.34495172441807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57341733-4	20.4594731021948	0	1.35363772375061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40814835-1	3.76128249872844	0	1.39199180665608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141552618-4	21.0838618608519	0	1.36256548423037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10325744-2	8.10780207895862	0	1.35852324092103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110190252-4	14.7158153589141	0	1.34807286085289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34570256-4	34.5468857241596	0	1.33846185126762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5603702-4	16.5348019175979	0	1.34960783694797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132816606-4	15.024274879333	0.10075816212424	0.666936916507557	0.151076000788598	0.879915763785241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0900981927122	2.15162704854195
Merged-chr15-88743546-2	6.05769030032146	0	1.39609894877921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79871336-4	20.366318301053	0	1.33509910425095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33045874-8	110.326164871982	0.63428205506821	0.167548404437763	3.7856645498753	0.000153298354269697	0.00834148672647292	C57BL6J_F1_Control-BALBCJ_F1_Control	7.14278624735747	7.76990318197992
Merged-chr10-86990008-4	25.7791186607181	0	1.33679330294755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25076188-1	4.35569289386205	0	1.3789403995745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117188635-1	5.41412365457041	0	1.40546663995695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21715458-4	35.1134606464545	0	1.33502533021963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3732801-4	28.7365594126379	0	1.34157861261565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126517321-4	39.6226408075748	0	1.33671620542891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20358062-4	18.6752759785174	0	1.33928203705425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112443362-4	13.526999102537	0	1.35469628390434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75025542-4	11.2507836474543	0	1.34894663657972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17345051-8	58.5366690951189	0.596955326337188	0.227985477094051	2.61839189910735	0.0088345278280119	0.1847061916165	C57BL6J_F1_Control-BALBCJ_F1_Control	6.08625730303333	6.71606547346672
Merged-chr6-82997914-4	22.33389690483	0	1.33788948018606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166140618-2	2.43759614856319	0	1.59082276206358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53554659-1	4.95616771312591	0	1.44831062586292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19876939-4	25.4541067457365	0	1.34710180664366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80935519-4	33.0883895660011	0	1.35102456144548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78403417-2	3.95417950363878	0	1.47270517416429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86059589-4	15.5522052278467	0	1.34371075217144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116460589-8	89.7173365879066	0.455383935118744	0.192097534895153	2.37058708414605	0.0177598596107935	0.296940553866965	C57BL6J_F1_Control-BALBCJ_F1_Control	6.75904579339667	7.24256530170554
Merged-chr6-134065260-4	29.9745887387648	0	1.33448729477799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-72109140-2	4.54748424454881	0	1.4014944731537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150798958-4	36.0820789367187	0	1.33842596053704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134116587-4	21.2900858075277	0	1.33907500426883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90197557-4	23.1601559275778	0	1.34121955466568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63051274-4	45.0544246597451	0	1.33706652926079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121804404-4	38.1091775399282	0	1.34040801153466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92902084-1	1.17453957844752	0	1.95936175296454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15995734-4	13.0825333720715	0	1.34294062874084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126890089-4	19.5231341254918	0	1.34854901626785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91666795-4	16.616048467018	0	1.33605383163587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70257274-4	17.5249136417051	0	1.34927545919153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65600056-4	23.5272657978598	0	1.3396652351201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4032590-4	24.9759948760826	0	1.33895915618495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14835511-4	43.8536502641345	0	1.33592029051719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11691299-2	3.94307692051549	0	1.5030261840648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26571581-4	34.6311001860398	0	1.33652206642668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4894515-7	33.0108021760592	0	1.34484661560027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41883831-4	16.0923633114588	0	1.33892846920238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74462764-4	17.5211237714821	0	1.34680752671764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145888522-8	111.108160103676	0.000114660012927694	0.158003470400953	0.000725680345100839	0.999420990907385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.19367031428948	7.19792576210596
Merged-chr11-110427331-4	32.6387219583886	0	1.34291617289199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46873604-2	9.14558352481848	0	1.34790504871543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-119906726-2	5.23553902634953	0	1.44310032699778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31280471-4	50.7112840358754	0	1.33676482143625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21024753-1	2.60012623794981	0	1.55055376322319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35208523-2	3.36790648382168	0	1.48129416166055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94564637-2	3.18149116890085	0	1.44266037199366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10429838-4	15.7029635644245	0	1.34667658022862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118363254-6	36.5113920528057	0	1.34120643509146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158167869-5	47.4028425442757	0	1.34337257622142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89552650-4	30.5719716904715	0	1.33748944263561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97659654-4	50.3856537265813	0	1.34137725860855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66220539-4	14.6698584720894	0	1.33842473358292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16228409-4	46.9492135187827	0	1.33587589532717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55232369-4	97.6996890480973	0	1.34171259053248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10583577-1	2.31759611529561	0	1.49966085411597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22108364-4	22.5857568983291	0	1.34146584900281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66375640-2	9.8529089548218	-2.46659364848219	0.918565440905586	-2.68526719887311	0.00724718425732693	0.160272452825075	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07370578505094	0.724326877898254
Merged-chr8-11455622-2	3.13354112558492	0	1.51330301032379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24530213-4	14.926180711299	0	1.34331518880132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73380508-4	13.0477059541169	0	1.34086323615121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53397771-2	4.11487065132349	0	1.53593725622305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54954810-2	16.5409003094717	0	1.35247615807703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35955494-2	11.4831588627965	-2.03747092849327	0.665605097980394	-3.06108071388793	0.00220539634319883	0.0671990694057988	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41102395105928	1.84558675562706
Merged-chr6-121338312-4	12.296653298297	0	1.34463470838041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107982820-4	20.0776628414833	0	1.3407161918072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105558036-4	79.9964578773237	0	1.3388561081614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125764600-4	17.4585352267236	0	1.34142635146459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25087723-4	33.3835179735087	0	1.33715786977129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78015652-4	17.7778532175318	0	1.3525405546505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100436899-4	39.7621913113336	0	1.33602995486647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88441383-3	38.1031720962334	0	1.33644492081159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126565419-4	31.8631424655746	0	1.33455624699861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44437951-8	86.5171272234987	-0.175669039811946	0.189768165962703	-0.925703417750647	0.354600131233266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.07440368179062	6.90272957323387
Merged-chr16-73647568-4	29.8059871413339	0	1.33756725103309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47303574-4	26.8480482636765	0	1.33775169775573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72835336-3	11.5279811627314	-1.66522561019697	0.774947752090287	-2.14882307317534	0.0316484276532484	0.438229835012345	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64556326003117	2.01605390242743
Merged-chr3-121330356-4	10.1773232688382	0	1.34916063390359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52070056-4	31.2464819633908	0	1.33527721978536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34557651-1	2.41844895681052	0	1.61579141987941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103945097-4	23.3837131131335	0	1.33775748659009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119377790-4	15.0090497972926	0	1.34209000826199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110731845-4	7.85067818157237	0	1.39925040753098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-95698231-1	2.45898223200982	-1.54764616305515	1.23974067302128	-1.24836282033363	0.211898218177159	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82166021832917	0.67591700901439
Merged-chr17-5210425-2	4.22711907217502	0	1.41596467714694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174018189-4	28.8643506432037	0	1.33468782326262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49411856-4	16.1866926379845	0	1.34405927466675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85812679-4	16.0182611744525	0	1.3388134774342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60620800-4	35.4747398177227	0	1.3419546604082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79455611-4	11.7655771711589	0	1.34441442001927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8495368-4	36.0759119274719	0	1.3361067364495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-18882620-2	3.19456756827005	0	1.50093013527416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39802282-4	22.9883827905361	0	1.35053694595352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103007096-4	41.5867318578565	0	1.34004619207284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128719532-8	62.1282678555165	-0.301607636883348	0.182445241318667	-1.65314060648229	0.0983022508013374	0.901116321061902	C57BL6J_F1_Control-BALBCJ_F1_Control	6.65344616306216	6.38716366389574
Merged-chr5-105567057-4	31.694132961982	0	1.35654948229088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65535461-4	78.6946593785879	0	1.33548729738505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64885231-4	16.4416206678456	0	1.3402049978041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56370894-2	3.23116269023925	0	1.86042823851204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64884428-4	34.7675599306097	0	1.33659560100409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46516016-7	30.2437582431784	0	1.33522594718513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95851105-4	39.0766399725136	0	1.34175633031382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142370170-6	37.0636765059094	-4.19551381487322	0.638461080093588	-6.57129141569322	4.98807257857441e-11	2.05414119165702e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51216198126962	1.18909650862134
Merged-chr7-29005987-1	3.44247951625982	-4.04479233934626	1.27491870036898	-3.17258844675792	0.00151086530807093	0.0497149680880312	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5224352130397	0
Merged-chr3-138521459-3	11.7802995865226	0	1.34333546028043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53387574-5	29.1510232722963	0	1.34228850009288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121250216-1	3.04524636426739	0	1.6271670631569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53289323-1	2.24946725160627	0	1.52858075773091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113242314-4	9.37606292162687	0	1.34892027478605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57387170-4	14.0245538052846	0	1.34784636216847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85099267-4	19.9315524833288	0	1.34252294262362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55551159-4	56.7497954247529	0	1.33708763907471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14125469-1	2.84504828459082	0.0900036753227423	1.27178056074688	0.0707698152501136	0.943580955511439	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0.723581231604105
Merged-chr15-99017449-1	2.88275173248003	0	1.53634508966984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111805915-4	13.8065722094574	0	1.34258976281821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79841485-4	21.9086622340063	0	1.34142540945238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3144940-3	21.6146412764271	0	1.36056562462907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43643352-4	39.0074370962739	0	1.34268781852299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4756636-8	74.5014418580102	-0.609005675103156	0.202044998992135	-3.01420811275246	0.00257651000982752	0.0754208441702822	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56407538063493	5.94936820243642
Merged-chr6-92101184-3	17.6422803888138	0	1.34507687754186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139169524-7	92.4342759844365	0.122080913889993	0.201265371983194	0.606566905608517	0.544138368559124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.03063744723358	7.15279169374311
Merged-chr3-149394023-4	17.1933391484966	-0.0353812128587667	0.967057441310932	-0.0365864646166253	0.970814735976768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	1.08918047352118
Merged-chrUn_JH584304-9526-1	5.74327216784141	0	1.41230328176545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30712183-4	27.7571483680325	0	1.33946063472484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32642673-4	18.3033861031782	-0.155029698892777	0.586745883921047	-0.264219491164999	0.791610792810622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80580015938179	2.75072703541089
Merged-chr10-8759372-8	68.3879233283743	0.280672409525094	0.244385744843336	1.14848110189496	0.250770010139741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59926301601131	5.87032162857419
Merged-chr19-6296741-4	24.1349195311634	0	1.38795425237969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29259546-2	4.31006733808305	0	1.51872499845672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113436506-4	14.6722196381235	0	1.34602948022893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95808063-4	20.4581636532643	0	1.33917552120041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73054032-4	15.788714665318	0	1.34127307143377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88075289-4	42.3373492888383	0	1.33612483302921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63911444-8	62.7788011650283	0.313493453686168	0.263840961579609	1.18819099130511	0.234758172097363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80639030204633	6.07574594614244
Merged-chr14-63422773-2	4.81329936613613	0	1.44705175108134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19950971-4	24.7896552192884	0	1.33502502104495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117860078-2	15.2957076174045	0	1.3456892378364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38483500-4	30.7024027112082	0	1.34191641797719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75137274-4	40.6960773945232	0	1.33972942261333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19896069-4	37.1609568610438	0	1.34004227368201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87260734-4	20.2317781226713	0	1.33964908992844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11588189-4	31.6162221352431	0	1.33304848801031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80146143-4	43.8223515183516	0	1.33580385489178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75176825-4	32.8277037009481	0	1.33907887134099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43786103-1	2.95592765268051	0.359077393035734	1.1734822664405	0.305993028872022	0.759609953531364	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.02748994520012
Merged-chr2-167760194-4	61.3872165339907	0	1.33648956495113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108900379-4	23.3839411708609	0	1.33508944684762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73553061-4	18.343294088561	0	1.35374620898218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44248279-8	84.4196044844123	-0.0830282970879856	0.268458237890961	-0.309278261454242	0.757109865744898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29763806349832	6.21383351187202
Merged-chr13-41600193-4	18.7249467049586	0	1.35011912979895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85941115-1	1.1101599114297	0	1.74017034821225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5929732-4	27.7660334873502	0	1.34284352396458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12533116-4	27.0072130905875	0	1.33737384172816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132652997-1	2.42138427494864	0	1.42404366998059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20123591-4	15.7751369701532	1.47751712436267	1.17594134018988	1.25645478551174	0.208951129158883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.10056930386922
Merged-chr10-99081733-4	45.4110986582691	0	1.34455304303234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63026760-4	24.3535160195687	0	1.34548663070708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85569068-4	19.1330967054108	0	1.34177496064113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75573345-4	29.0902596583558	0	1.33898765010335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86470698-4	16.5608975623551	0.580294626649605	0.507182561235615	1.14415335029634	0.252560045630459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87080228804603	3.56894562907775
Merged-chr3-9342266-1	4.21969813913782	0	1.41509399871652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33074229-1	4.09433729190623	1.73490575985045	1.24174716183619	1.3971489633083	0.162368780438021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.14143228603163
Merged-chr1-64343447-4	9.41247241356053	0	1.34597289318322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72145679-1	4.26671096938214	-2.47804303646023	1.28975015718793	-1.92133571192049	0.0546893976732156	0.627053568470434	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	0
Merged-chr3-145913477-1	2.40966108759192	0	1.44146724726323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110598576-4	12.5605173413235	0	1.35002585578795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46790879-4	10.8083656156824	0	1.34915389995139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-12304050-1	1.26752833028449	0	1.58391978282653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59346688-4	36.430418457697	0	1.33621111694666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34716620-4	22.2067032565662	0	1.34109096330598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43917051-4	12.4998677954232	0	1.35377765250802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4509939-4	11.0094141825328	0	1.33930331837945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51833604-4	27.4434906125224	0	1.36697321190694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14098787-4	10.6492511924089	0	1.353150820087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30730242-2	3.17521729231146	0	1.4810064716099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19419079-1	11.3453819731391	0	1.3817343395986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120452572-4	16.3326708248322	0	1.33852874467503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11548773-4	19.5150791997683	0	1.34146031714945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41368422-5	21.3075342427094	0	1.33955343851857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119131312-1	3.49362512601568	-0.0837715413402291	1.10256032287905	-0.0759791002831313	0.939435725684559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.06702908365212
Merged-chr17-45752890-4	81.6725173213522	0	1.34105193779804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182380861-4	32.5849484193704	0	1.33405910098627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70998822-2	3.34102945844463	0	1.41824352750302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63091210-4	11.6010912902371	0	1.34563980469015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94521887-4	24.1644424722854	0	1.35085534473604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74839139-4	23.7722006223153	0	1.34607408252547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27449629-4	20.0137414373858	0	1.33823318855524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23984833-4	12.725071455897	0	1.3440633479456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126537011-4	20.5265225796594	0	1.33699669383011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97659128-8	129.633891657106	-0.0748828831683341	0.273481699534214	-0.273813141046996	0.784228224336511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.38777790639645	6.30389381705073
Merged-chr7-45095558-4	29.6036170261631	0	1.33996072955678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72512661-5	58.2739813468379	0	1.33373501374444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-40500603-4	36.4928771404793	0	1.33780367735192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11098581-5	67.8756751488551	0	1.33570570643156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148556671-2	11.7207160841102	-2.53976847057797	1.14781269551169	-2.21270289177778	0.0269181359027193	0.394682956117928	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr10-44071295-4	10.81467483518	0	1.34557891170947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69145460-1	6.97955271180475	-0.325430258137172	0.728370273686335	-0.446792338861039	0.655025003335275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31653289104558	1.68580115571326
Merged-chr5-68049745-4	12.9754634199359	0	1.34373402529033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-50763170-4	18.6330873453983	0	1.33956241252815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97951314-4	19.2086222319809	0	1.33691495055142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50753268-3	10.8337123395342	0	1.35070713670382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110411701-4	10.2461477522199	0	1.34574584188047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65309063-4	19.63819686988	0	1.3393440245748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109369296-4	80.4118905747673	0	1.33261459135145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164681665-4	18.1451458565515	0	1.34008472030888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-48928-1	6.17091042328571	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31510630-4	13.7017321277891	0	1.34242894042325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-64726521-4	33.782529639011	0	1.34012500595675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126541021-4	18.5242270791501	0	1.34542213707814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20968044-4	17.2884921166218	0	1.34224894696388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82888646-4	19.632985397673	0	1.3497912144595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41344839-2	10.3480543565085	0	1.35028877311267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8927825-4	51.4536935863099	0	1.33614132121344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83817632-4	21.4340976373117	0	1.34047953436947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31291083-4	24.9081546287984	0	1.33904865012105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63747855-1	1.92674936457323	0	1.69764382543862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73193296-4	18.6803562491775	0	1.34436727510983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40551494-4	16.4489394909072	0	1.34177613075995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83636114-2	5.598472704998	0	1.43369387772166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85479343-4	27.382498843907	0	1.44665690149585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122840411-2	6.18960389143033	0.00477428051836726	0.948148952250238	0.00503536971383714	0.995982373225189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79795952835561	1.03321995648104
Merged-chr13-112753517-4	20.5578944955315	0	1.33934792449929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152526926-2	5.37645833328658	0	1.39691312784147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90039986-1	5.84876017672252	0	1.35826208822633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144200717-4	41.9236373448997	0	1.33365546491008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91393369-2	3.86230760181832	0	1.48431382560633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41331840-4	18.6536875025913	0	1.33969022738735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129032346-4	16.7715314078444	0	1.34126750883852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84597783-4	25.472441890098	0	1.34075296109537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27540277-4	57.6988111734228	0	1.34224507603109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119177893-4	35.3673748541856	2.87569784972586	0.39968101629007	7.19498232970568	6.24688548134409e-13	4.29841073266308e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08320653278703	5.95016419273496
Merged-chr10-118709872-4	57.9778442883672	0	1.34053186655677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31234250-4	46.2384058544077	0	1.3379048695677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155177387-4	16.963434973061	0	1.34296316334097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37845819-4	14.1429213081641	0	1.34211327902873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5626486-4	27.8319189768748	0	1.3391568257691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80846994-4	27.3664644404481	0	1.33810987827807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88179493-2	3.95471127700719	0	1.42287001458578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96167720-2	3.76512148021784	0	1.44043786331841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64122531-1	2.17645892385577	0	1.65268358647774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12302056-4	40.7025287708842	0	1.33628394118634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77837702-4	52.4425977090016	0	1.33925562757086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21974314-3	9.74824711488849	0	1.35074122880181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66845533-4	55.8199073385116	0	1.336696460929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35783163-4	12.1424177731264	0	1.34366008025184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27401727-2	5.29345476910758	0	1.47060241914342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63076499-4	40.1468032589148	0	1.3345780760765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84619270-2	10.6708884239374	0	1.38797189621927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89796512-4	35.918500710709	0	1.34256538903758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137963797-1	7.44509783674658	-0.387349567616186	0.894740560475532	-0.43291830584982	0.665074120544237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01788589397739	3.65535407281958
Merged-chr17-71179434-1	4.34937916233841	0	1.36922704090949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110960428-4	24.9657583772671	0	1.33834510486738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-91000135-4	15.0538424228526	0	1.33952596774546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52576255-4	47.1358191473095	0	1.33693938476446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117540011-1	1.91227629703834	0	1.77364850420935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127236769-4	53.0147706943356	0	1.341928941815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94601838-4	49.7784633196911	0	1.33805017574887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67464821-4	23.1036897492218	-0.295895191227756	0.46647474273313	-0.634321998859084	0.52587070258286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51026811465286	3.3478129876819
Merged-chr6-86556535-2	3.49216447700888	0	1.3820395329358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67306029-1	5.09692633788319	1.2155624658749	1.12540958008728	1.08010673392404	0.280094653553695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76620369058164	3.10087169485198
Merged-chr7-64011919-4	52.4098270644275	0	1.33375237168754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59184684-4	25.5621612056955	0	1.33638120452693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9454921-4	26.7689385880737	0	1.33705298938113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120263583-4	21.8392850171665	0	1.34198464802904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86487481-4	65.9285326271477	0	1.34248456330965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64753288-4	15.7490362537622	0	1.33687663039101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127183035-8	65.9110449392438	0.0603590026986993	0.218891410510831	0.275748612327174	0.782741155303975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.69129338469293	6.76380480167885
Merged-chr6-34608784-4	24.95615233555	0	1.33877297607631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65718792-4	12.0079693727463	0	1.34195651028204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51757406-1	2.16935371397581	0	1.73421652106593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114680469-4	13.0035857079262	0	1.34691193070994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19295983-4	10.3082683041122	0	1.34169097894889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115668256-4	20.9057772968624	0	1.3501313092037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127596132-4	25.5666457195986	0	1.33741602417966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36645880-4	13.0198402433117	0	1.34749582439813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132110902-4	30.4335351332673	0	1.34373969441051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63756309-1	1.90454581128272	0	1.91254499482484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95840126-4	14.3927250019795	0	1.35746511524911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21947107-4	90.5644110779822	0	1.3422459964515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138244144-4	34.9758399703476	0	1.33946998819353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99497637-1	3.55183677685778	0.620457520545664	1.40827674181247	0.440579256991155	0.659517622479857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr18-80408830-8	60.7656723536328	-0.36858626770329	0.275275097652386	-1.33897425101901	0.180579055525584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11765630601485	4.74610373040399
Merged-chr11-11774184-4	19.1196510689453	0	1.36666652710199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109924001-4	10.0023035387986	0	1.34426542706178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38761605-4	11.5584094086532	0	1.34639421009043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72791846-8	42.4409358677137	-0.353790194780017	0.335838618939167	-1.05345298255917	0.29213343232849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67898299753544	5.35211033852659
Merged-chr17-80100035-4	15.0909464211613	0	1.34367124389014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67958236-4	23.8753975692294	0	1.34070792723603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17176908-4	13.487119827498	0	1.34242254837566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79696111-8	72.0445463369243	0.346339027073234	0.229028189491255	1.51221134761866	0.130480105151986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.28523200515066	6.65440726565
Merged-chr1-151041196-4	21.7793164184499	0	1.35717718199307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25203737-8	65.3103269993343	-0.54550418674381	0.301268645781141	-1.81069020750369	0.0701888195367667	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	6.02597754268566	5.44845251651756
Merged-chr18-61767905-4	15.4065815227692	0	1.35030335147783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-141081077-4	16.802656488363	0	1.34927994061462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121469588-4	10.6925599301514	0	1.36694403515846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38864139-4	9.86953310892832	0	1.34832848194072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73512226-4	21.2688216290753	0	1.3402416579292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46639201-2	4.59741311674762	0	1.41849737175109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46713194-1	8.49567602355801	-3.59385620525866	0.997861325451411	-3.6015587673296	0.000316314897991149	0.0151761355162408	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9367696272132	0.577068348605183
Merged-chr3-144669577-4	14.9783737456073	-2.48571839094305	0.973929030062959	-2.55225823875726	0.0107027158578218	0.210488035931743	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15579102048539	0.723581231604105
Merged-chr11-116868340-8	43.4326131489492	-0.0439301663533184	0.260212562544647	-0.16882415638861	0.865934956998953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5000160423297	5.45021403321496
Merged-chr3-9027552-8	81.0604005753901	-0.394963191572539	0.210620859247868	-1.87523302764484	0.0607606723256318	0.672275470577858	C57BL6J_F1_Control-BALBCJ_F1_Control	6.6394197017316	6.25472511105651
Merged-chr8-88229021-4	11.454372451434	0.340773448987814	1.05262972198788	0.323735347643678	0.746138407227268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.990919527803163
Merged-chr3-84345163-4	10.3385705757791	0	1.35759881179992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11282912-4	13.6715535373191	0	1.35862080319814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121735206-4	12.8471427324711	0	1.34911963025022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34293743-8	66.344693902249	-0.509188438576051	0.307071719897596	-1.6582068799623	0.0972757166043263	0.895295804054899	C57BL6J_F1_Control-BALBCJ_F1_Control	6.32456546411328	5.7122615589923
Merged-chr2-118961698-7	49.6709110964251	1.41432978694431	0.318829821790677	4.43600218762745	9.16449166514524e-06	0.000827529239909684	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92894682220723	5.47616897812822
Merged-chr14-76857568-8	43.0099270548789	-0.340897364352785	0.287069015518635	-1.18751013144662	0.235026462684739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.87844071063988	5.48172591122782
Merged-chr17-71082119-8	72.9987806628955	-0.0214683462447287	0.25327821163841	-0.0847619149940056	0.932450671966477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.00078875063496	6.94453503797582
Merged-chr3-127293077-8	40.3587977824886	0.945268894690472	0.265886617317745	3.5551578497117	0.00037775223372002	0.0174314377527899	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82924173409088	5.95677919943434
Merged-chr15-77798135-4	15.311809855867	0	1.3445105080796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50294349-4	12.7891830147102	0	1.34269791181655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57570699-4	11.6763626549098	0	1.34845564203307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49084898-4	13.4835351929869	0	1.36175779011043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46524330-4	11.6801731013568	0	1.35127145411038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87019657-4	13.7172224953545	0	1.33940859891297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85574770-1	3.36261308726547	0	1.38405608777498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-33186544-4	11.3545688615024	0	1.35199873369016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55766952-3	8.0489270754457	0	1.34794795309195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102521079-3	12.284125668142	1.80668894026251	1.3164771336642	1.37236636631422	0.169949414947993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.9134233865196
Merged-chr13-88459969-3	11.1661684867551	0	1.34532033412798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44518418-8	39.3836832797911	0.160580991068842	0.359320244945739	0.446902152961326	0.654945709423182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43531862784922	5.5897179489381
Merged-chr8-128491876-4	11.3952673396789	0	1.34591970684184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64189687-4	11.4735433097471	0	1.34448014998722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64029933-4	15.3978527102076	0	1.34285619996333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54699632-4	19.7865850238279	5.34762759409181	0.992927621383177	5.38571742685778	7.21562489236376e-08	1.30744717841334e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	4.85304798315924
Merged-chr11-100571290-4	16.1983650174657	0	1.34947490316304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36218925-2	8.26444960005062	0	1.36521274923799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135768769-4	12.3754855510535	0	1.3527321430437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43531536-4	15.7400938918445	2.58488572948167	1.11400403890301	2.32035579693865	0.0203216380174456	0.323948363926781	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.6542276833624
Merged-chr5-100582681-4	13.7069606340986	0	1.35622333920216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113269986-4	7.69268042099309	0	1.3562780996094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60628015-2	11.1027610320785	0	1.36160781381483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23846146-4	10.1856050815269	0	1.34783380363113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-64756517-4	9.92540633178585	0	1.34362681297693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112266401-7	30.0802247734684	0	1.33361910442945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180422262-4	11.6518076959091	0	1.34123923021838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-116505509-4	9.92320554515391	0	1.34347303867439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51930839-8	52.7609509319265	-0.467544961136327	0.268783252773065	-1.73948695207985	0.0819491453590426	0.805546761767124	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0682123701357	5.59875319632633
Merged-chr12-40656106-4	15.5718102088962	0	1.34194691703761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16119611-4	10.8539016643785	0	1.35644586611607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17905764-3	7.67836009261007	0	1.39035242439594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59265776-4	16.4742412941226	0	1.36587336636516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5849709-4	21.7423730721759	0	1.36537374841935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58269546-4	15.3630110138403	0	1.34313122535596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120763421-4	10.2431982919478	0	1.34469266109755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121313796-4	12.0688774698088	0.104748485556185	0.482614207142923	0.21704393282638	0.828174107451632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41561343388903	3.64082126070743
Merged-chr19-5850375-4	12.175640660379	0	1.34652980947504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45442656-4	14.1362905112888	0	1.3379850109929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40018308-4	12.6376695812714	0	1.34910040534523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136915232-4	11.6329435688305	0	1.34934156416898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99049437-4	11.2496207505762	0	1.34902952704924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62224121-4	12.2265107486871	0	1.34522354238735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24264276-4	25.7903542094955	0.943113859768357	0.646971658128138	1.45773597331456	0.144913332339979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05402110133586	3.12681563542707
Merged-chr6-89311713-4	13.6118641405778	0	1.34145002916859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99460936-4	10.0567552035801	0	1.35179408777908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113494557-6	40.0130540998437	0	1.33703260901371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53742287-5	23.8926001662478	3.75852656902011	0.620818316706814	6.05414896415677	1.41161938135541e-09	3.955372059335e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	5.31354680402386
Merged-chr2-102812943-5	22.781872882018	-0.0918767356543344	0.582003553330357	-0.157862843153783	0.874564877734105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08392302876793	3.31722748527629
Merged-chr10-13837864-10	91.190517977304	-0.755938482163526	0.228590355420238	-3.30695702700938	0.000943153594063292	0.0342248906673474	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30217066004256	5.53708935323934
Merged-chr10-126990532-4	9.00929126689171	0	1.34264491581826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55418228-4	12.7828857196187	0	1.35815519838176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73716054-4	21.0523478823716	0	1.34387089302421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45060370-4	15.7885280483239	0	1.3553996151141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119125659-6	52.966844662725	-0.740163629780882	0.430490091359941	-1.71935114102781	0.0855504530783329	0.825689923646582	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03879677247611	3.25446472702544
Merged-chr15-97663837-4	11.7541001057954	0	1.3420988433338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24165856-4	13.3430162847863	0	1.33973677148037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19466015-4	13.8130261487461	-0.690314187228869	0.994908518594083	-0.693846895797375	0.48777822949855	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.67591700901439
Merged-chr14-70060552-4	14.8793155044584	0	1.33834403797601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141655978-8	48.1156862361586	0.445612345885449	0.247785356774155	1.79838046802581	0.0721167358265162	0.745425678416732	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6650981389054	6.27057113294612
Merged-chr15-59737398-4	13.5032588898967	0	1.37319010156326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60752195-4	18.8512717577095	0	1.34632382221851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23015922-4	11.693849812494	0	1.34397228308967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-54132845-4	15.1434754355292	0	1.35063690853758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5927982-4	11.6698513592822	0	1.34712646514174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106820691-4	32.7016702031252	3.55416686325099	0.504269353525438	7.04815162452996	1.81310016011969e-12	1.01606506808192e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26276386882201	5.98596927049894
Merged-chr9-85331691-8	40.8538000517254	-0.0670974356886514	0.362524359471708	-0.185083936942692	0.853163200401756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73852207507414	4.72027091485565
Merged-chr1-120057265-8	61.3889229428052	1.29437409942982	0.306396928301573	4.22450090020429	2.3947089467262e-05	0.00181553673131226	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99004468405036	6.2530172806177
Merged-chr8-13673410-4	11.6308772132547	0	1.35144155826659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122804672-4	10.867427592829	0	1.34734950465655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32479367-4	25.6902477465934	0	1.34707233946331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76933488-4	9.99699404028031	0	1.34978794981118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66820451-4	11.1354303558459	0	1.34223729241753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87696698-3	32.463736473794	2.38061676277615	0.597493669685743	3.98433805002194	6.76684867087599e-05	0.00421350660824912	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	4.15111257349167
Merged-chr5-140765671-5	24.3232489452549	0	1.33793256458206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76715349-8	48.9847176429639	0.0812540804831824	0.246634030515108	0.329452023767681	0.741814051119731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73757699593433	5.85488748784156
Merged-chr10-82953623-8	59.4611243957452	0.232296431400971	0.257668771385622	0.901531179551911	0.367305963622128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28277043173845	5.5576877931856
Merged-chr17-32528914-4	9.79115943608692	0	1.34922809130448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24599946-4	14.7623319338297	0	1.34822960109817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123612157-4	10.7420915659851	0	1.34136257156136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57902700-4	26.1379115693334	0	1.34625047939947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96483069-4	21.4915539278434	-0.692723211612427	0.710262497364065	-0.975305910396888	0.32940853957741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25795226179178	2.09090111698119
Merged-chr5-63827153-10	120.737756892714	-0.275834852177594	0.175866220229434	-1.56843566557433	0.116779493076918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.70423005955588	6.41971616191021
Merged-chr1-127242325-2	3.49418857138926	0	1.42437362867655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8637373-2	3.40301436595785	0	1.47519585561163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122852909-4	16.7756536670003	0	1.33819258805607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102624284-8	79.6345502422179	0.277835288762782	0.299845466534431	0.92659492896111	0.354136888810176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.72255821263727	5.96246035201847
Merged-chr10-118812136-4	15.1553186884463	0	1.34263522418597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148511946-2	3.68500078591727	0	1.43740690138746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34410068-4	9.74390629353549	0	1.34131623741314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64398286-6	31.7267849596233	0.40290157412576	0.425148652867808	0.947672235130038	0.343296339790132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27427622865857	3.79480694880307
Merged-chr1-156025262-8	47.7155445756936	0.216759841505396	0.248869648800714	0.870977407449833	0.383766489045779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42177085620541	5.68842513016923
Merged-chr6-42376403-4	11.9983801433661	0	1.35164662748165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101549452-8	51.7072006215766	0.580644227992962	0.255909637455963	2.26894240390958	0.0232718286184964	0.357455024547286	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34454393045559	5.88141602515635
Merged-chr3-127796529-8	58.0877070653166	-0.222781472064381	0.288633308665573	-0.771849489909387	0.440203576118917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39719750457193	5.15836289380887
Merged-chr15-79414740-8	52.7996546108877	0.349789763136571	0.271833850901667	1.2867777945106	0.198171748761984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22755946079563	5.58427283210769
Merged-chr10-82178473-11	65.7480039094467	-0.0875919679452303	0.284548723094232	-0.307827661262157	0.758213472295941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.7972569490353	5.72529217850661
Merged-chr13-43802973-4	21.3681523010401	0	1.34533941728925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53398390-4	16.2543107901073	0	1.33851313712041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105718764-4	12.4213502328557	0	1.35412647050806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127008906-4	16.9679448732585	0	1.34866947157812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136948134-4	17.509081304021	0	1.34810182446659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95546881-4	14.6634024696167	0	1.34450089837454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15243923-5	32.7507708544459	0	1.36265479400477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-127441298-10	130.315408635557	2.06463548410658	0.200076165458304	10.3192475694305	5.76733431708097e-25	2.8500593285655e-21	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46380016353804	7.50350241281933
Merged-chr10-127607300-8	62.8532033138461	-0.0195120488165786	0.292766331150108	-0.0666471746936443	0.946862589231293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.56858381740403	5.51433160136017
Merged-chr7-19461760-8	42.967352244949	0.0483520847132743	0.291898730140107	0.16564677992969	0.868434930746713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74349071053449	5.82287318308431
Merged-chr11-68458328-4	47.5574748563779	0	1.34283608247427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128166317-4	12.9329582890893	0	1.34756317301074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121264074-4	22.8556337941624	0.0165808992636447	0.59608672730851	0.0278162530786616	0.977808702896306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27360810621371	2.44306101831552
Merged-chr5-114965591-3	10.1348582212316	-3.4286050832227	1.08310786435485	-3.16552505623706	0.0015480332850858	0.0507335005477067	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03247245696714	0
Merged-chr12-111471341-4	21.1338599198171	0	1.38862362204374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135706002-4	18.5241259415695	0	1.34215474081556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76328939-4	13.5164847556808	0	1.34914000520973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104794085-4	17.9375357762363	0	1.34416116857967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156002495-8	104.980408446386	0.611803544006523	0.216200707501558	2.82979436596948	0.00465779302869486	0.117056389850589	C57BL6J_F1_Control-BALBCJ_F1_Control	6.657415135906	7.30143656249562
Merged-chr16-91382590-4	20.1105453977966	0	1.33968174664595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32460579-4	15.3603105261114	0	1.34751587531801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102115907-4	12.5248920368331	0	1.34786043731029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42367843-4	20.9707138704553	0	1.33698017276709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125465806-8	79.2275169341587	0.192180081454165	0.263246685263315	0.730037991786811	0.465366962261015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52294863530066	5.65475734992843
Merged-chr8-35642149-1	7.06191060322069	-0.839542714007345	0.745225475221038	-1.12656201635932	0.259927706204587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8631871709571	2.2918226953127
Merged-chr7-101003956-2	6.24788244699277	-0.0326296495833933	1.1914320622037	-0.0273869158120864	0.978151134005072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr19-55654601-4	11.7266049373065	0	1.34593057316371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94389191-4	13.49927945771	0	1.34333945027882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104602898-4	12.1615896045996	0	1.34948299575458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60792166-8	40.8430571515603	0.560956951202736	0.304372123371467	1.84299713452445	0.0653294288581928	0.703077098258266	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53562802578936	5.31537182075355
Merged-chr4-133756852-8	43.5626873948308	-0.294845993672652	0.290430134040582	-1.01520455047358	0.310008331920143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62308199411469	5.35083395252204
Merged-chr7-92698918-8	121.248629648677	0.056911727302476	0.310926255791745	0.183039309940408	0.854767174749029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32758820579426	5.37359608839235
Merged-chr13-93996640-4	17.5992151007695	0	1.34354766008763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97195909-4	13.4264383544803	0	1.35097507038292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70839237-4	10.4285545324263	0	1.34526437370635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99619643-4	9.48151648271081	0	1.34299407627306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43139791-2	7.03854042440217	0	1.35764192985533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55734520-4	12.2049066722685	0	1.34206663214566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98055966-4	16.9340918840084	0	1.34123751246524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28247813-4	10.2952469527621	0	1.35075136997691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117836543-4	11.750670089747	0	1.34584035457684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103008359-8	55.1205069991889	-0.0802703122564172	0.261837891033487	-0.306564920529975	0.759174558039777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82083163246715	5.7103463232899
Merged-chr13-60877514-4	17.849037023412	0	1.36753509182867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106560287-4	8.3037254000203	0	1.35139909515384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55655518-4	12.8040709034559	-0.637157609139587	0.833052467409645	-0.76484691428958	0.444362707948246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	1.58309189503961
Merged-chr7-130943422-4	21.6513752867611	0	1.36066990206123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172241084-4	12.3284904245242	-1.17210375454122	1.23115856561526	-0.952033139578141	0.341080175323089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.41385117919798
Merged-chr3-97680747-4	17.2054046536024	0	1.34198231891565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93428456-1	5.67852215498492	-1.10216780383136	0.793867810971246	-1.38835179937945	0.16502994612241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44823763137854	1.38647389072186
Merged-chr6-137697059-4	16.6215051913048	0	1.34107228847649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-18213777-2	9.25816149404263	0.263998955542607	0.793714218263558	0.332612103283432	0.739427106004679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3009007084372	2.87278986419448
Merged-chr3-69163275-8	48.6806399817732	-0.34997411482828	0.257171225277628	-1.36086031573115	0.173557836581432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48423024225156	5.14773349191729
Merged-chr17-63422841-4	13.9009302807212	0	1.35081845674814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13601779-8	63.1879847921023	-0.432461913618068	0.246054275624103	-1.75758747748298	0.0788177255892077	0.788137114614118	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2235258044408	5.80380923345995
Merged-chr18-53877587-6	31.4946434669488	-3.30120806955846	1.06670016454281	-3.09478537576992	0.0019695536079064	0.0615304394093011	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	0
Merged-chr15-94557625-4	10.3542466875724	0	1.34009975544162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-6410251-4	12.7011510148891	0	1.33927049493072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85647486-4	13.626934908187	0	1.34062384513174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31076536-4	10.170049661975	0	1.34205963590456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35170968-4	21.826802267128	0.492972903244673	0.6670372287841	0.739048559768219	0.459877511064405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61093010937348	2.98884140769149
Merged-chr19-10803954-4	8.06423892111929	0	1.35729240257216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106371815-1	1.62579611197554	0	1.69153112828397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81203738-3	21.6062125619019	0	1.3454856220933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36330832-4	6.97899785155146	0	1.37118632685971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21997586-4	10.1261570740323	0	1.35273570129227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37705881-1	4.8168575708941	0	1.3989023750795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-156194129-2	2.85720995676081	0	1.48226553007536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68784904-4	8.45206677528376	0	1.35094600295237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77280688-10	75.8612766631524	0.173417156241013	0.280092987128263	0.619141371653121	0.535823230722134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48756918825847	5.5282806566279
Merged-chr19-36768287-8	42.3040000706726	0.438356209334225	0.286191968369036	1.53168592337636	0.125599957719556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83826277850262	5.43934709786446
Merged-chrX-143052147-2	7.06955247331982	0	1.34706373890318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19584280-4	11.8214202671144	0	1.34018887996893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43589193-4	11.6221564605351	0	1.34792789577026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8859635-4	13.0532178908999	0	1.35111368216408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27302346-1	2.62905364630399	0	1.43055883825597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59840955-4	8.62477016494088	0	1.34955813208035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164938889-4	10.1318192075808	0	1.34188539434385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90614264-2	3.8827688256352	0	1.43948915622912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25505434-4	11.5095773136147	0	1.34764020330093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8460301-1	2.48680527316587	0	1.46831530583061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92059615-4	12.989820050469	0	1.356527565331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21657536-1	2.29886059218728	0	1.49522413168218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113450501-1	10.1865331427878	0	1.35383273702923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31127411-3	9.25379522559332	0	1.3531752334238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172504086-1	3.7693875553407	0.135590201002718	1.0314003169005	0.131462244853856	0.895409651561599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	1.2960273170181
Merged-chr5-123398028-4	10.6934191972247	0	1.34597764620569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99386039-4	11.0263744158707	0	1.35392771932993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73880645-4	19.0103868243703	0	1.35170348519042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80210290-1	2.6410396476177	0	1.44133217009093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6193744-1	1.70625034359172	0	1.58379774514054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32376639-1	1.86531293590671	0	1.45299571661279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28795991-4	9.50470355755611	0	1.34675824299573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75451912-1	1.27177145803979	0	1.84112439256415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142079879-3	16.0371352862089	0	1.35765797917082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124898530-3	11.5181775944453	0	1.35469644470652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73794239-4	12.8881057492347	0	1.3436701348917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76429062-4	13.3879509900969	0.295044206855562	0.957527158063143	0.308131424128344	0.757982330745323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.18984215491549
Merged-chr17-50530358-4	13.8224749722488	0.258335244479738	0.94924299356348	0.272148697679549	0.785507686753581	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.14143228603163
Merged-chr8-4524654-4	14.1819522813819	0	1.35751887806473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19338221-4	11.0401913250479	0	1.34188256765427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124621602-4	12.5261183287741	0	1.34152112832537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74524368-4	8.74079517122168	0	1.347267543528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22935786-4	15.8403242864191	0	1.34180894957143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99091380-4	16.3566784747213	0	1.34427632062513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145806875-4	13.3336331607122	0	1.35320016284052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68275525-4	20.8877788606038	0	1.38544150764103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99298155-4	10.5553966871891	0.289241720209216	0.609569134425165	0.474501912702612	0.635142034337905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75033869392915	2.95314773288896
Merged-chr14-57887299-4	9.63017884176304	0	1.34808859598513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-194989193-4	13.678630384487	0	1.35862011963392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78182321-4	10.9588494537212	0	1.34999178685149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54160883-4	13.0952284475168	-1.33193288074499	1.30299742163775	-1.02220684295052	0.306683012723841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr15-58616905-4	14.3590284001646	0	1.3507788366922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80691649-4	15.0656810478113	0	1.34264481677528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36749363-8	68.6706154433727	-0.372514610769197	0.311079441299139	-1.1974902912693	0.231115509496748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43511522544595	4.88090991808451
Merged-chr2-36238474-3	24.8716029028426	0	1.3534649450824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115633115-3	7.01859217461384	0	1.35455058006283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100461864-8	77.0234195296239	0.650896658922086	0.26857314448007	2.42353590558042	0.0153702337623519	0.271799133730541	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41852889640663	5.99716754354534
Merged-chr10-77391276-4	15.2047958827874	0	1.3436761256673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83640803-4	12.2411689368694	0	1.36305469803689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152315829-8	66.3217700747615	0.482207999271676	0.245069028225457	1.96764153660436	0.0491092969848991	0.582867308908762	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49149933661205	5.95778407683241
Merged-chr18-76378892-8	59.0045456862074	0.0149905589305349	0.234033411438722	0.0640530719027695	0.948927968263678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.03345411506544	6.03387449019868
Merged-chr3-84069527-1	4.60892577070519	0	1.4143503376733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44360103-4	14.3637656949259	0	1.34905842285506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4200226-4	9.92669008682274	0	1.36387304193423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43423212-4	11.8142604154403	0	1.34192844293068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37210431-4	11.747800925761	0	1.34219705456824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102497420-4	14.5661721604458	0	1.34314866827778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116788240-4	19.0442792871754	0	1.34404175547392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170903600-4	14.6874795430305	0	1.35550526799772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12058705-4	15.923969322781	0	1.3484454759463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13860066-4	10.6970423810905	0	1.34369695199413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65490576-7	40.0751945060918	-1.30679097716307	0.383566108171078	-3.40695110783931	0.00065692893491481	0.0263737075133192	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05095202836937	3.75457501234066
Merged-chr11-8762391-3	8.93263005584004	0	1.36345436789082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129782445-8	48.2640918357829	0.48310880028194	0.267278453161326	1.80751121000518	0.0706826084334659	0.735966092793786	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47005104595535	5.95008587448274
Merged-chr1-89450259-4	23.7545093072211	0	1.35060383322331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77193446-8	58.1654522364525	1.2336589668499	0.243448335989489	5.06743643096071	4.03209092781879e-07	5.73770761113355e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08017247784118	6.27359582037287
Merged-chr12-100445483-4	12.9528650814492	0	1.34760864460838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9173612-4	19.5163533656263	0	1.33486825921749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60269354-8	52.2819656966758	-0.0746914321707361	0.325909935350082	-0.229178138096665	0.818730463693042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59870357568971	5.53570168384038
Merged-chr1-131700584-7	64.0710963492611	1.15978422165974	0.214354326236266	5.41059395452274	6.28160557393561e-08	1.15749761828327e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76600586312356	6.90431924212533
Merged-chr6-128843820-3	18.0651325267249	-0.207577114872856	0.694969129991976	-0.298685374521963	0.765180117376526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90990595114556	1.46460328489499
Merged-chr8-35428317-8	57.4194893997385	0.319034276852441	0.244964028860485	1.30237193736776	0.192789270885158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.259775062297	5.56196127998157
Merged-chr12-106658438-3	13.3241141779138	1.73723341960401	1.27253269208954	1.36517783032466	0.172197164536984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.878778741524029
Merged-chr12-26438947-5	57.1287987248844	-3.11753724955841	0.348850727296177	-8.93659380824967	4.01350399058361e-19	9.48565493148411e-16	C57BL6J_F1_Control-BALBCJ_F1_Control	6.50973376785246	3.40951768244187
Merged-chr17-24463966-8	43.8023830234882	-0.905412152405887	0.259267329130777	-3.49219531609086	0.000479067800116707	0.020861376360243	C57BL6J_F1_Control-BALBCJ_F1_Control	6.02286969075205	5.14831787759908
Merged-chr8-40584864-8	81.241178602039	0.546504069441217	0.257041429415301	2.12613223745435	0.0334922503566655	0.454469604877179	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19697092707461	5.74367149892025
Merged-chr16-77251623-4	18.7832321916212	0	1.340141721945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122934145-4	20.5280007151888	0	1.34833819709696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98781164-4	15.8954055288251	0	1.35197761833467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47272246-4	10.8662222131214	0	1.35129165432735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27379544-4	16.3313066933791	0	1.34156719886185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91734985-4	12.1941606454267	0	1.36837999105497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62382451-4	10.8866524929542	0	1.35057151624103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72255459-7	26.2267802894503	0	1.33781460195515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148940809-8	44.8659977893323	0.416438332560258	0.304431336121506	1.36792203413004	0.171336481915685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04095119038329	5.44910108168807
Merged-chr9-97105579-2	6.66252399722508	0	1.40194266796672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143046542-8	51.0993228599441	0.150788319669557	0.242243278653792	0.622466474642873	0.533635181771317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69127179352223	5.86064194154695
Merged-chr4-3626791-8	55.5902327812193	0.217136615282888	0.283253690837692	0.766580003391058	0.443331268376359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12509971538285	5.403341266155
Merged-chr5-134352928-4	26.4545076688808	0	1.34954271506412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55665044-8	46.8104740604378	-0.181423131399394	0.280698449325216	-0.646327515650784	0.518067271779281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00047307003475	5.7783263615719
Merged-chr12-98820798-4	10.8433714767878	0	1.34745957610266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85488910-3	15.4150503099012	0	1.37025028227456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31209694-6	29.9213727178455	0	1.33753742048869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122054660-3	8.66640900448242	0	1.35313507441615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141676621-13	116.348568437512	0.0525081439362187	0.184538615904926	0.284537432334871	0.775998552081831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.61853409284867	6.63612841909793
Merged-chr2-163770045-1	9.64319565953575	-0.494328612898212	0.725896846822847	-0.68099016418355	0.495877714115243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78730055031641	3.17500006360417
Merged-chr17-34348204-5	45.889679969402	-0.789977762410154	0.293511995455066	-2.69146670201795	0.00711385994220453	0.158225168820907	C57BL6J_F1_Control-BALBCJ_F1_Control	6.03667831347535	5.31716279235772
Merged-chr6-29474637-2	9.6053429855156	0	1.38659358114497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93387630-4	10.2775371213539	0	1.34681466807206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89843322-4	21.2923952671145	0	1.34907031200666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21316939-4	22.0613603162338	0	1.35262806427405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28259578-4	14.9548098778913	0	1.34371474162529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104239269-4	10.7696439000197	0	1.3502062750507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134243773-4	11.8920339623375	0	1.34390973629802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121369058-4	16.5159904578863	0	1.33751552370533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100750944-4	10.3718634694203	0	1.34857879412272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22461174-4	11.7466496853167	0	1.351065669952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8466149-4	8.67606090085624	0	1.38018039385105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54404322-4	11.425214083533	0	1.34637843850744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-164941747-4	15.8083327570385	0	1.33946374295626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50482535-4	15.2132507259629	0	1.36542117972752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148490778-4	10.1917381438447	0	1.34548020156415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11813280-4	21.9572784232699	0	1.51225725376977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103614385-7	27.786549278925	0	1.33592934537287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100411335-7	64.335757687206	2.31620759048988	0.35852672468431	6.46034850687727	1.04462123356483e-10	3.76056726061925e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63925430270747	6.06524396919032
Merged-chr4-28967883-4	23.5337043356077	0	1.35776129269684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17554136-4	12.4207216508314	0	1.34623917306954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8968845-4	12.8738312598636	0	1.35622564576537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4480377-2	5.58253134808916	0	1.46645825325074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31938606-4	10.5113913077438	0	1.34704984549191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5511982-4	13.1944841676626	0	1.35212200065556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62401320-6	21.7275224629933	0	1.33550576889692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26637875-4	11.555102874062	1.7856558538787	1.25977978682011	1.41743491407017	0.15635581091233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr12-99608472-4	13.5446902435016	0	1.34724993012233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8382485-4	8.05972970772243	0	1.35617303779857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10452720-4	14.1117903173799	0	1.35035391048429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55876703-4	14.654214979708	0	1.35248682042439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72429588-4	12.2208368774379	0	1.34399685203848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45107211-4	19.5612565854134	0	1.35076014466391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118152557-2	7.05149861659981	0	1.37971910832692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66183334-4	17.7444962563123	0	1.34678850997151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27202946-4	22.6000123774113	0	1.35241256332522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58359256-8	70.6546064220719	-0.0381343679058668	0.274166732108365	-0.139091886213219	0.889377539766441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6868618936438	5.64849047833326
Merged-chr19-41381984-13	112.641269731044	-0.1606655634483	0.205836802750529	-0.78054828534732	0.435068217915816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.214987015035	7.03879531200031
Merged-chr9-48422478-8	40.5785966840825	0.479937298689693	0.26631047037282	1.80217209641742	0.0715183333865328	0.741496296883184	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13567577834003	5.60513871024002
Merged-chr7-73595449-8	53.1424233078501	0.640917062403923	0.274165363672276	2.33770252310224	0.0194026852018864	0.313528705377331	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17327223400957	5.78592144110514
Merged-chr15-62152866-3	6.73019371666914	0	1.36998900388624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159954229-3	10.0486975668493	-0.69182669813661	1.40216964905746	-0.493397285129981	0.621731900268796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr10-19062212-10	235.054335382957	0.0405430940424971	0.199733282507138	0.202986170024258	0.839145841912519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.89717971308768	7.94800079654211
Merged-chr7-101363634-8	64.1728068061896	-0.0204876058704527	0.242602792817256	-0.0844491756774014	0.932699310354351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77699035629459	5.60957599162881
Merged-chr5-134520331-4	12.3470716049014	0	1.34732611355047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128131507-4	16.902747817177	0	1.34698174999492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180601945-4	12.1407778735732	0	1.34106207022024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37137324-4	14.5339180894257	0	1.34710744270428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51518625-4	12.2487658419861	0	1.3420530561947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100740444-4	9.9234581469868	0	1.34947098124593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97928016-4	12.6478344009827	0	1.34311606704614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87639947-4	11.6672945866567	0	1.34892544612892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39403969-3	22.7113209839172	-3.42635085303449	0.479365956743118	-7.14767247201618	8.82615916428615e-13	5.64448454131095e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2009048339302	2.40799833663131
Merged-chr1-177258695-8	62.3528809642629	0.370176404090535	0.308186498471916	1.20114413164102	0.229695296617335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96727963662743	5.41598533806838
Merged-chr16-55526683-4	9.39804338138794	0	1.35029592288544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35971527-5	32.7141735414762	-3.21664135599266	0.524616376268409	-6.13141621478269	8.71002027140746e-10	2.49193679964968e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	6.08657883818473	3.09012216938928
Merged-chr8-90795598-12	80.9269329923495	-0.339360276993806	0.243563357121868	-1.39331417091613	0.163524807248925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.35193403411563	6.11632219446892
Merged-chrX-100637646-4	13.7830137838596	0	1.35453159524598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155178475-4	14.1545651032412	0	1.34451131164205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73881677-4	13.3955140531313	0	1.35021494536946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122068072-4	11.0359480575858	0	1.34833553432696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30595595-4	16.6314734643097	0	1.35838094380713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57828846-4	21.1806840681337	0	1.3682608064614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118349069-4	11.3390590902389	0	1.3472164938239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130783134-4	12.3768079128289	0	1.34343645743544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13765869-4	13.2484228534986	0	1.34857171397346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72225316-4	16.9428387042501	0	1.34576128036633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58117289-1	6.29388669088178	0.237484574295841	0.667193469080504	0.355945591948212	0.721881311376873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90012233499004	3.03741475890424
Merged-chr12-52307743-10	78.9527101171385	-0.228919775689458	0.231345332734024	-0.989515426933839	0.322411025796534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.60215635127767	6.38243919729022
Merged-chr18-39517384-4	18.4675272400281	0	1.35664616636968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112251640-4	18.7284690668189	1.24061748844686	1.31076600857233	0.946482804965416	0.343902388489571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr7-16895245-4	8.85564600169695	0	1.34363209542493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33898580-4	13.001812122694	0	1.35276639423889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3327534-4	11.9003731839797	0	1.34922832528228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94122728-8	52.8066390976623	0.207074847811002	0.227416493026341	0.910553342263603	0.362530763781537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92495031753996	6.13480332979615
Merged-chr6-82702867-8	35.3700136292062	-0.010621860334308	0.266039949632142	-0.0399258094470211	0.968152274541368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48095147558182	5.51521294001826
Merged-chrX-73580349-3	8.69832784582897	0	1.35529719674998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105696191-8	57.8287504806515	0.368924382062091	0.294996769817069	1.25060481947265	0.211078691396919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28909029629514	5.61623095071286
Merged-chr6-97420255-4	14.8694483978734	0	1.35743240006176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88813104-2	6.87432364400979	0	1.36592977441269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90426397-4	15.4025094938667	0	1.344575005087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191253835-4	15.3802136433122	0	1.34867644991355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25024800-4	11.9076255682966	0	1.34624724288123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-103632677-4	8.86144783752765	0	1.35886465197797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92021177-4	11.9304905333713	0	1.35990983398681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87661133-7	122.009697628314	0.0272043782397771	0.236112209785816	0.115218006999532	0.908272326205715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83061298018164	5.84984492301044
Merged-chr2-131254145-4	10.0106811857172	0	1.34710429186944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-94566046-4	9.64571618822236	0	1.3459410636505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59601067-4	17.4651212376294	0	1.34836050910708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155246783-4	17.9906588323595	-1.65247957888754	0.92106157950868	-1.79410325612433	0.0727966894413922	0.750056485711688	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9450324219075	0.67591700901439
Merged-chr19-11234440-4	12.5602628443236	0	1.35264660756249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8803284-4	12.0887632364546	0	1.34906871607231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150621819-4	15.3404013633133	0	1.34482138080791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20107852-6	36.8662686501019	0.652708839139045	0.476393388662797	1.37010473837841	0.170654208921184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57431100767806	3.67972879474148
Merged-chr10-13935868-5	45.9701229063166	3.8683142920342	0.592319575992436	6.53078920370444	6.54240252850149e-11	2.59590116092564e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	5.622153328135
Merged-chr7-44745355-8	42.9451399851866	-0.338488581330522	0.253355144718192	-1.33602410839939	0.181541393486198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57287747492844	5.23277096148949
Merged-chr9-48407738-3	26.1130608069469	2.86039194720151	0.842772874559027	3.3940246934243	0.000688734819865539	0.0272916316044714	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.54284503379392
Merged-chr8-11452201-4	12.6717394036533	0	1.34455784781132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60743361-4	12.1600453051422	0	1.34211849268229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96430361-4	11.2409594091246	0	1.34767146103347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92066926-5	20.2554964493876	0	1.39344023492499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83984209-4	15.1186462592198	0	1.34814077796233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132656793-4	12.4574189015497	0	1.35331467272599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70877919-4	12.1482559336884	0	1.34519617927883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32359274-6	29.6702721772086	0	1.34796779743336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162574323-4	24.5660476231543	0	1.34799243052613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94549715-4	12.8437388334345	0	1.35023931686796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30873708-4	10.308877252047	0	1.34418891709889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56023563-4	22.083575791002	0	1.34621069064366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90245823-4	21.6417364530789	0	1.34075508360118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113738074-4	12.2721327066076	0	1.34245980793023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26584603-2	7.2122525748856	0	1.36294949712308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147046465-2	5.14435362360777	-1.35058226924191	1.38595163209866	-0.974480088599344	0.329818220850423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr19-53404843-4	28.5089743394678	0	1.37958128887135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154061559-4	11.0894292232095	0	1.35688636733548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87207854-8	80.2904239530508	0.332138546717882	0.204336395877665	1.62544976528181	0.104066759417945	0.934136454810037	C57BL6J_F1_Control-BALBCJ_F1_Control	6.57071273889953	6.90192712518639
Merged-chr16-91612723-4	15.4125100097539	0	1.33788794683391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-61998984-4	19.7040518194886	0	1.34984661455614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66812705-4	11.3352216031971	0	1.3429016898205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27192421-4	13.4837915979875	0	1.34742061623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40495855-3	11.6591097663301	0	1.35694155054096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6340590-3	10.6189926427787	0	1.36399279128303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30513825-4	12.1804555304104	0	1.34898976552107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155412938-4	13.3952959347391	0	1.35298539384122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70457205-4	13.5504171586583	-1.79811835794575	1.23665850276925	-1.45401366174997	0.145942518562941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0
Merged-chr7-141525447-4	12.2159858542519	0	1.34367864834623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32967518-4	11.2732639891917	0	1.33930597463219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69538722-4	11.4388399983556	0	1.34322565960158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123990840-4	16.1973661783004	0	1.35323598057364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67072071-4	12.6191543492111	0	1.34804672060596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114683932-4	13.0727545582423	0	1.35379596451508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69156136-8	57.0270274275964	0.795583707901215	0.25748397202595	3.08983779316964	0.0020026583416457	0.062406704140107	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6829863795853	6.53577664804067
Merged-chr7-49253203-4	24.0319892639603	0	1.35648982978701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54492758-4	11.3386719001524	0	1.34371452589158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99540826-4	9.63052097057411	0	1.35436935446864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53644194-4	8.50794578618389	0	1.35516225842455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61921243-4	9.96785235362418	0.765080605027216	0.822421654264671	0.930277797355999	0.352227270407657	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	1.86774501229157
Merged-chr18-20734399-2	3.4101184387199	0	1.62941364505609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88256588-4	11.7787069336399	0	1.36978607659592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94505747-1	7.08106732058069	0	1.35373256569051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17616841-1	2.24816259576106	0	1.51074653615046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72788976-2	5.62517364529578	0	1.37970535945111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61423019-4	12.7470824997319	0	1.34450951599235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66851641-2	3.09224858779656	0	1.39690928423503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64084510-4	14.3479327360763	0	1.348077520005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-71785167-1	2.97017511267999	0	1.5070823403148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122955794-4	14.5324236331234	0	1.35079492265555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112950548-4	14.1813974463482	0	1.34568788052905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46963601-4	12.1495828090377	0	1.34795191687287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153250791-4	10.5600879767893	0	1.34599999578803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40956687-4	12.5440766644411	0	1.35360297531885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35131589-8	36.6827650436742	-0.343772724017544	0.301358443563516	-1.14074362726488	0.253976625729705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70504136677613	5.42888725450293
Merged-chr4-63410212-4	20.1771285479621	0	1.34904956790118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41321401-9	94.9773534070658	-0.131558485493938	0.247124623088409	-0.532356848337502	0.594478865983859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63495330994224	5.51097830043216
Merged-chr17-17910272-8	105.390865687668	0.431531893282053	0.274131739079617	1.5741770534521	0.115446522725526	0.992339900195579	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21133380771546	5.63961380701978
Merged-chr2-144337922-4	10.5808942714766	0	1.352014137389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17013135-4	8.5533736481634	0	1.3667100752109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44704326-4	12.0898087391341	0	1.34628076826756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111577646-4	9.36307202538918	0	1.3512684337846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122598620-4	11.7690998417983	0	1.36059262812893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16099966-4	18.7546443047729	0	1.34846988698179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6384743-4	15.1802814083807	0	1.3484057434771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153914064-4	17.1814932719773	0	1.33861771142436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88746052-4	11.462997008286	0	1.34937469777108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63595821-8	64.6031667687539	-0.818394663646301	0.24065815906414	-3.4006520569626	0.00067225335727892	0.0268280177965452	C57BL6J_F1_Control-BALBCJ_F1_Control	7.09562466803976	6.24069347943756
Merged-chr6-50114454-8	46.5844883761214	0.105491721346884	0.250418604065761	0.421261518250381	0.673564126983861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33599813804044	5.36805657722988
Merged-chr17-78366281-4	15.8534441588987	0	1.36494275872324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-148904277-4	10.6608712267011	0	1.34426053126952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59407947-4	24.1930812925001	0	1.34464116064702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20714009-4	9.07340806986687	0	1.35991489294105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32472536-4	10.1458885120332	0	1.35572669078732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100872164-8	62.3385952488087	0.435563761320109	0.27168210426957	1.60321108558528	0.108888058842104	0.960572215286905	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39086950367052	5.85709456927737
Merged-chr14-121894659-2	6.93661698394884	0	1.35995105707534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102037003-4	22.6959431329488	0	1.33655938452102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-18624013-4	15.7387543478077	0	1.34810562361788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-50702539-4	10.4367139862582	0	1.35263361170216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122261438-4	19.8229825495309	0	1.35171923119492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62675910-4	9.65374963302421	0	1.3418533025965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-130417452-4	13.0051721348787	0	1.36176479130219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82971272-4	21.0514375888986	0.0418414982576201	0.527602639674253	0.0793049448794523	0.936790073246896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86738604325439	2.86665454548713
Merged-chr12-16877746-5	24.9412493701851	1.45785841017928	0.602081482051929	2.42136397420963	0.015462386724817	0.27289606492673	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	3.48487569697692
Merged-chr16-58499802-5	26.3059694069713	0	1.33496824810478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47873604-5	28.0573103527955	0	1.33762933217051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91367280-4	13.5208631464657	0	1.34474351213757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25143647-8	97.6564127337712	-0.455545581263786	0.250912642044482	-1.81555451950096	0.0694387356001527	0.728604864467014	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54632541614824	6.02766855758036
Merged-chr17-64579965-3	9.42163955305132	0	1.36578848363875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22027477-6	37.8271937150259	0	1.33875596432073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-123112951-4	11.0135311712027	0	1.35406629511101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50111297-4	14.5294860314033	0	1.34112586027105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180705320-4	12.0285125047504	0	1.34756328637545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99523111-4	12.446454908656	0	1.3449404705596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67559758-4	17.3971810424328	0	1.36310627381092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50687502-4	15.7215436268596	0	1.3491882344389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41552847-4	12.9427970934448	0	1.34508561311609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134747721-4	11.1447833295032	0	1.34261286466892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79506876-4	13.0527301589481	0	1.35173049046383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5092967-4	14.5934393486343	0	1.35507820750647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126996944-4	8.19427735843842	-0.035042437769504	1.15253018414525	-0.0304047896112089	0.975744225065825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr8-22658070-4	15.4752178533584	0	1.34863996170674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143832459-4	13.2056674179944	0	1.34170941802247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30495985-4	11.5927269462616	0	1.3408956052869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119826376-8	45.6987427555907	0	1.33518251053275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66226057-4	9.39520979437925	0	1.35442222415352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8956995-4	20.0636765392814	0	1.3444201722712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50111430-9	66.802947747845	-0.600156284943802	0.233506805730579	-2.57018755006337	0.0101643470116099	0.203753256612976	C57BL6J_F1_Control-BALBCJ_F1_Control	6.57729401991766	5.97238173756792
Merged-chr4-9634301-8	39.1001258704768	-0.0430983866830889	0.244990277013511	-0.175918763832052	0.860357763834171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57019036727595	5.53207488952798
Merged-chr6-119358326-1	3.98531445434236	0	1.44751541568229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82913475-3	10.935260707799	-0.0501921403614343	0.775205957371977	-0.0647468455113407	0.948375563721074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69736543272236	1.65422789556272
Merged-chr11-95849975-4	10.6636880313478	0	1.34670894029315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37511089-4	9.11860682055223	0	1.370134908509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21728563-4	16.5915086077406	0	1.35815456143469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83410365-4	16.1779331783048	0	1.34366660078459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148805933-4	13.7906123412948	0	1.34551986487688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99323795-8	73.688457993817	-0.264237272678967	0.276712296555949	-0.954916987671852	0.339619678287184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22564483235229	4.97509400027982
Merged-chr10-10468869-8	46.1286914723015	0.332032315749423	0.26872326134471	1.23559201420789	0.216610254599479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12750328226545	5.46003762975691
Merged-chr11-68867344-2	6.5190663843191	0	1.35666958444461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24164318-2	9.48083877277357	0	1.35118660338584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28702961-4	15.8800907835818	0	1.33797058824074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13786179-4	15.1796963960984	0	1.36381518467847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8649822-4	17.7280175333623	0	1.34056752821205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43856540-4	24.8762023320529	0	1.34193471511114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71179522-4	13.3421103842886	0	1.35230607336569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119709429-4	19.0223699991441	0	1.33815385478359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57854480-4	10.1413962149075	0	1.34579294065123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-45415194-4	20.1374968628475	0	1.34202815128486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6165984-4	13.0034589228879	0	1.34519652256883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78237957-4	12.6536462020956	0	1.34210128399366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146156385-4	31.5099656814266	0	1.35046276871975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90789794-3	12.3890213132116	0	1.35046834479027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62736666-4	11.9523302939813	0	1.35897162739875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8718512-4	9.5144984692	0	1.3549196737003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116975195-5	28.7492051702977	0	1.34581655536101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47234766-1	2.58160085483761	0	1.49315961348802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80936603-2	3.19887117579754	0	1.4407179796647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72837478-2	2.8164710806584	0	1.52498980213168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68105464-8	72.889157942832	-0.227426300653773	0.204536692444575	-1.11190954510718	0.266177044270548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.81929377111477	6.58392403927152
Merged-chr8-126778851-8	74.5610448739867	1.0084827452996	0.231401004831314	4.35816061401618	1.31160117373905e-05	0.00110026741054446	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43641148418704	6.53945649253025
Merged-chr7-97136595-8	58.9059403000839	0.457284242506969	0.289791900863017	1.57797454361268	0.114571458117709	0.988674353600392	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40054134352949	5.94387671853908
Merged-chr3-69679946-6	26.8629894811744	0.220505259600974	0.467824033607446	0.471342307706237	0.637396307688686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63303927324872	3.76469869524424
Merged-chr14-54757211-8	56.0698767728727	1.05953707401417	0.304303327027999	3.48184518507311	0.000497971502573662	0.021381700559559	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05413144295671	6.42138003046305
Merged-chr10-81303570-4	11.5200533223552	0	1.35072436286381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22347691-4	12.6018169076078	0	1.3413226917322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20713604-4	11.803093160733	0	1.34289915786892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68249619-8	81.6820409732105	-0.00546964951099323	0.294743015996772	-0.0185573506890258	0.985194226191078	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53557862634669	5.5499286267443
Merged-chr16-50046163-5	19.6063248505499	0	1.33830006595992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117386737-8	62.4009395030239	-0.0938296131793936	0.243212390544486	-0.385792898829434	0.699650054868209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54053057262515	6.44579643712802
Merged-chr8-71296426-6	38.2889101016485	0	1.3371651575323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43855998-8	69.8059427306042	0.385907213292577	0.274667697955311	1.40499671481342	0.16002225516512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75732128547604	6.16683754743894
Merged-chr6-113714486-4	12.3890200880915	0	1.34117273664437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78144335-4	11.0569338651595	0	1.34320861162924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34958559-4	13.5393056847829	0	1.34451278378539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94849552-4	14.0317830719918	0	1.34541630999158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97821640-4	23.7951964011122	0	1.3442080579109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62858490-8	62.6992742092292	-0.37128848927421	0.270575641966708	-1.37221697627865	0.169995902148037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54212592424802	5.15396978656321
Merged-chr1-51494001-5	15.3396472372409	0	1.34088647748641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5986020-8	41.9167496591998	-0.0695070441288347	0.313334202181866	-0.22183037678246	0.824445931276928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92258005283017	4.97854758304299
Merged-chr8-119784474-4	9.82805294688343	0	1.35798061294368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75667428-8	25.6497963409748	0	1.33735058008231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29498084-4	10.4563514227489	0	1.35115499238017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102647271-4	8.53055952785756	0	1.3513724773443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47282154-2	14.7905529435294	-0.150634908943351	0.612124816645979	-0.246085283339314	0.805616215040285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81960882153758	2.52022272749692
Merged-chr5-150216233-8	55.0685359303065	1.02972098349759	0.257837867766444	3.99367630681128	6.50566633843939e-05	0.00410256979688198	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77660575526781	5.90563170161802
Merged-chr9-16215166-2	11.040925144912	0	1.3563359219476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164456988-4	14.416955719901	0	1.3764710093937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177714217-4	12.0050788841937	0	1.34550694787167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19059480-4	9.32412430687814	0	1.34649885156318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154677261-4	19.2239966844869	0	1.34052956275845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111094808-4	11.3074812743766	0	1.34708783250384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5572951-4	9.04700912456368	0	1.34525019146036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90034124-8	60.0553283867545	-0.0264015514142929	0.256753407093617	-0.102828436487569	0.918099135835304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66481950944925	5.62419045134503
Merged-chr2-154314100-4	17.8742866083026	0	1.36179179481569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58482810-4	14.3922662446052	0	1.3427649424185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107683832-4	16.9778434658286	0	1.35292239571768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43788576-4	13.4414956108003	0	1.34588874306127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134083818-4	18.2774362481258	0	1.35472134025797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9769757-4	9.90373121928924	0	1.34650181873313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9880565-4	15.0686719512328	0	1.35081086017991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35055827-8	41.1023698908646	-0.0660548359132625	0.277357647960264	-0.238157614902784	0.811758849765552	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31169158095631	5.19967789358988
Merged-chr2-154732914-4	16.070870952005	-0.492962052970573	0.6419327553129	-0.767934100403221	0.442526337002788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40436455841047	2.39057570002462
Merged-chr11-97127195-6	22.0220883386796	0	1.34680647489572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65533072-4	10.2324952531485	0	1.35470552886101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119004080-4	10.8310967159871	0	1.34909890824509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124193181-1	6.8154166702708	-1.7052398625574	0.992277086959549	-1.71851177959016	0.0857033077224832	0.826165296060731	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99468681090207	0.724326877898254
Merged-chr7-63912185-8	57.6773050201867	-0.00628541233273919	0.209363830780045	-0.0300214813099334	0.976049921282842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12842557728031	6.13975239720655
Merged-chr14-103898795-4	12.1723003464569	0	1.35420174166629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46408193-4	20.5002665673969	0	1.35783618576451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124059844-4	12.6371581491191	0	1.35370007673562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45013504-4	10.2533004606903	0	1.34978835597881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101976168-4	16.4111855863571	0	1.35734834439346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87379089-4	17.5067498805508	0	1.34858929384318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55147658-4	17.8393607039381	0	1.35078439964701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46462182-4	17.1055607566528	0	1.34174098751414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106821167-4	9.79498252626239	0	1.347147923936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74260781-4	23.7288322536852	0	1.34231177559871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140912433-4	12.1602773262162	0	1.34891478722811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32509472-2	6.05159859487886	0	1.40300636043661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17838138-11	166.390687456173	-0.124307176373541	0.274157522204242	-0.453415158461109	0.65024982319712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69813619149018	5.4962341085922
Merged-chr16-17410411-4	13.8072339039497	0	1.33978571865741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49190941-4	18.7136275235613	0	1.35831746305188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66453584-4	20.1395671358408	0	1.3453548426882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80085845-4	13.5450012526027	0	1.34208917871529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37854076-4	11.1088394463245	0	1.34555767246218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101177999-4	20.3644056519548	0	1.34122014572005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140678822-4	10.5866759663153	0	1.34594198676655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191557326-4	12.2917203902392	0	1.35042510682947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25044311-4	11.1683605825082	-0.0349700448073563	1.09439507187336	-0.0319537667028191	0.974508920877652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr2-66120175-4	11.940415344763	0	1.3470966360923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70111040-3	13.4089639850095	0	1.34752975092844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99100664-4	17.8390750768828	0	1.34926665009523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127378301-8	43.7776228926931	0.244080834836198	0.282863777752733	0.862891801754704	0.388196958599192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22103273410248	5.5166203747413
Merged-chr17-80553392-4	11.0042899128353	0	1.34478528972433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105779510-3	6.67074354112554	0	1.3516418125671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114528145-1	2.40171205308904	0	1.53982437634332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61029437-4	12.5343092913396	0	1.38275611714165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21474825-1	1.45855648138616	0	1.65609859687715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-98437033-5	19.2974260922427	0	1.34073296851128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10033273-2	6.37016444448668	0	1.3860964856832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95851840-3	9.56406022738898	0	1.36077684549258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-37656555-1	1.42752636632545	0	1.72060466168778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80065221-4	12.1218078182845	0	1.35306239951756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51330510-1	2.55473390958723	0	1.46920781545011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84360305-2	2.25371212188239	0	1.68080318374615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84531834-1	3.7597912468522	0	1.39157132334281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78587485-4	12.4538914012237	0.573193433431171	0.956688281207777	0.599143362253314	0.549077287719131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.897114879832661
Merged-chr10-125321748-6	31.2517212751753	0	1.33588072341868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11550537-1	2.11815321169799	0	1.45789192801176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86950793-4	12.0730305213014	0	1.34595003976121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78463539-4	9.84508816994849	0	1.35430345318015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38520109-4	17.1972973485856	0	1.33903022123215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39493277-4	14.0109241413266	0	1.34490179274946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6179948-4	22.1083064232767	0	1.3441171634642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65927926-4	16.2684079021705	0	1.34584991934945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38202461-4	10.0366267338677	0	1.34692390318224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120914043-4	12.7519514108405	-0.706848056333816	1.00864557628382	-0.700789328733368	0.483434498651457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13132003301738	0.723581231604105
Merged-chr13-65241049-11	122.743077932742	0.267328079983706	0.212451064261997	1.25830426367756	0.208281739793757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60653704662948	5.90975178239555
Merged-chr13-89505046-3	6.94999658942897	0	1.36993285504617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143706893-4	10.7295659650441	0	1.35526418401587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25119288-4	13.4951686340007	0	1.34153925845243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84847713-4	12.3372107376414	0	1.34785485094438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116081987-4	16.2496922114594	0	1.36124819879015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45628612-8	45.7653552548275	0.419934882617282	0.242694959931397	1.73029914892335	0.0835768415396122	0.815793415200535	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80890955914134	6.20957831122351
Merged-chr17-23983094-8	68.1903695238614	0.464263361868139	0.236791389320339	1.96064292371742	0.0499206914903404	0.589025150580293	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49064546468508	5.97330470308721
Merged-chr1-150372116-2	4.22076102690467	0	1.39457647494516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50560982-2	5.44901500645563	0	1.37384783348736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145750551-2	4.98967118188713	0	1.37578158086217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100370496-4	12.0349458186016	0	1.3491230417669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91305959-4	21.2052047463514	0	1.34191876570726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73041117-4	12.1729881764708	0	1.35649566911574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115314749-4	17.0676956953508	2.66059449230816	0.544167355825853	4.88929455952079	1.01197973152398e-06	0.000128829522777311	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	4.79399012001853
Merged-chr2-167939750-4	29.0518717719686	0	1.35706617103752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82761934-3	11.1286173369752	0	1.34079289555067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94373277-2	5.057915080926	0	1.39903899586217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77112936-4	11.076143742298	0	1.35409032919684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149989173-4	19.4809127569008	-0.397588872184341	1.03507566303761	-0.38411575731338	0.700892653050588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0.724326877898254
Merged-chr10-13184283-4	11.9029725918961	0	1.34618280084496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149380286-4	13.9176992412654	0	1.34101378667409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43882076-10	124.382891429524	-0.0884886760679097	0.246188545869648	-0.359434577897718	0.719270011219925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.79862547819599	6.66214659029718
Merged-chr14-26675961-3	7.85590123052971	0	1.36904676676372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9059623-6	21.8584767095119	0	1.34523254933732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45664460-8	49.2980466455701	0.789788645124434	0.249668134822357	3.16335380839202	0.00155962660754825	0.050949364639252	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42412019417598	6.23861189284826
Merged-chr10-67049028-4	10.7011160867569	0	1.3432151141256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60616339-4	8.99917724483728	0	1.35039593024787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56962624-4	13.8976555713952	0	1.36707913766547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79228201-4	24.9672603701485	0	1.33788321310192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113844084-4	14.5267506962868	0	1.34931889685872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153350691-4	11.9975478840198	0	1.34886629906958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23696044-4	9.23826431805118	0	1.34632508481245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97445341-4	19.5004722876647	0	1.37439702257248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26504286-3	15.6966875564824	0.582736081274545	0.69078793926591	0.843581724796485	0.398903180047499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6342703608096	2.23369880798954
Merged-chr8-90938625-8	48.376979845464	0.349610156182269	0.219962109605205	1.58941081629814	0.111967674220891	0.975140935691206	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00806060968515	6.39541134274557
Merged-chr15-73732711-5	20.7022727647322	0	1.34395467107511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53250881-2	6.17233645230132	0	1.3706135793473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19117137-4	11.5936808911943	0	1.34498460805075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90689904-8	88.0577535075579	0.168825190201453	0.285577306083715	0.591171590336256	0.554405456005556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23970617003387	5.47448919943673
Merged-chr15-38468439-4	18.6928714245286	0	1.34381557738185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11115413-4	22.6618822367267	0	1.3530489118007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10441563-4	11.4624243173539	0	1.35500490493002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69503816-4	10.747041094605	3.36870248415513	1.08430023687927	3.10679862419897	0.00189125183133513	0.0596441085754504	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.39057570002462
Merged-chr5-3358926-4	12.1701398590426	0	1.34208746523119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55815993-4	17.9598721055627	0	1.34062264663817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116756544-4	10.6017087927734	0	1.34639499615111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69401126-10	99.3095952962982	-0.787679669089899	0.178421601726093	-4.41471022269556	1.01145384281662e-05	0.000894010072222258	C57BL6J_F1_Control-BALBCJ_F1_Control	7.41230321004031	6.62820096533183
Merged-chr14-45669878-8	43.2328137796612	-0.0389455967224406	0.295980496387856	-0.131581631890386	0.895315214815218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14728829249135	5.1576730857441
Merged-chr8-71310595-8	44.1964730299191	-0.0667046436629033	0.281224230064464	-0.237193799579833	0.812506446301857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46161182330283	5.41728195801707
Merged-chr8-80913158-3	17.7345857110362	0.127089068450487	0.595535087875166	0.213403157996842	0.831012517512381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	3.00600125633687
Merged-chr14-66846498-10	97.6123720078648	0.870682801111745	0.255197137828406	3.41180472681159	0.00064534325240587	0.0259853435981709	C57BL6J_F1_Control-BALBCJ_F1_Control	6.36402671773185	7.17972224854963
Merged-chr1-189707200-7	38.5890930459613	0.388739578132347	0.314595161337768	1.23568199993697	0.216576790930813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.72739562070572	6.0892814863708
Merged-chr15-59807955-10	106.943160883334	0.140232205014307	0.229631444240998	0.610683808908739	0.541408926963392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18623691822554	6.30506847220453
Merged-chr7-35086745-4	10.0786560648422	0	1.35524123803713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61696610-4	17.1247524794865	0	1.34258431759906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-3832156-4	14.3589763619708	0	1.34430685453588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67595455-4	17.8548923922203	0	1.34268854126792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21187492-1	4.61453590452923	0	1.39192867977915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69692379-4	12.310238050073	0	1.34804109790086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16112649-4	18.5715329267316	0	1.36204574175507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79885491-4	16.2429369091063	0	1.3420829716707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59295454-4	12.8773098205498	0	1.38351592982346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3686670-4	19.4784820404327	0	1.34139470081133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71294885-2	5.05910988114527	0	1.38065637373591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83655853-4	13.9860629722725	0	1.36098179029314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137817653-4	10.4212940996302	0	1.3413594488715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102520399-4	8.32698936317182	0	1.37081687520158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9893287-9	75.327586497965	-0.374610651395126	0.202408546509615	-1.85076498920133	0.0642033698838567	0.695152735097229	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56696263786024	6.19370303485539
Merged-chr5-134214586-4	13.7412937140202	0	1.34240811455128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54941333-4	13.2411340225554	0	1.34510033424173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21841118-4	15.4300340699693	0	1.34587877650387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55817116-4	10.1165884986109	0	1.35150986253294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50536574-4	18.4344086316514	0	1.34421336178076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90199232-7	34.5816497756012	0	1.33259304015683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92216409-6	48.9700890224051	0.163684189443896	0.344765805818197	0.474769210523768	0.634951480901998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37407990370662	5.57587680565006
Merged-chr8-115276476-2	5.16283973030826	0	1.37232921260862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121769011-4	11.4116445943112	0	1.35484645171255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145720357-4	10.5514218771637	0	1.34350274947584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129019027-4	11.9034407980165	0	1.35073283681781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22814578-4	11.70229566381	0	1.35977448310184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77737529-8	52.4643434534879	-0.673281094554186	0.26416774700989	-2.54868772654892	0.0108129073504205	0.211735890007747	C57BL6J_F1_Control-BALBCJ_F1_Control	5.71646416404667	5.10053961879316
Merged-chr6-24645501-4	21.5271042127756	0	1.33710252374064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89120569-4	12.3901785280678	1.76675418035912	1.24732296375213	1.41643682646912	0.156647648111008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr1-191277873-4	13.3327210675941	0.674981222239071	0.545041420850353	1.23840353488363	0.215566470593152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8692000926858	3.56620969423473
Merged-chr6-119883353-3	12.0299482202453	-0.588389965280509	0.58710046206175	-1.00219639278469	0.316248749656053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69192818927546	3.18702340357023
Merged-chr2-163719372-8	60.763550990219	-0.171372030559898	0.255214393072706	-0.671482624849757	0.501913124606253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33819131011522	5.14877732649067
Merged-chr1-80613569-4	15.5104395880834	0	1.34652935716732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53509292-4	8.10089729779775	0	1.35103299601837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152122250-2	6.58667645025074	0	1.40971876920319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11197169-4	23.5432859971491	0	1.34300338066121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142391150-4	11.7054082372587	0	1.34817717221682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109045712-4	10.1041887889948	0	1.34705020600148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68874656-4	11.8162263307477	0	1.35259720901685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-8168401-3	15.0029520035238	0	1.34599177107084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100588331-4	12.4017196234222	0	1.34389332356881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77911656-4	16.0355504948234	-2.20893906344903	1.18659827973877	-1.86157278429168	0.0626633324524906	0.685688401253781	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr19-38015742-8	74.6510401003774	-0.343483687642269	0.195456698255223	-1.75733904598018	0.0788600361728659	0.788295826833545	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54533476478664	6.21204490320047
Merged-chr7-24389599-8	125.790702723527	0.83989675286427	0.175460482280605	4.78681434102675	1.69449451412373e-06	0.000196398778876869	C57BL6J_F1_Control-BALBCJ_F1_Control	6.224185908255	7.0739412919776
Merged-chr5-123080312-4	11.4151012407483	0	1.34723280180989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10914513-4	15.1024804718245	0	1.34897191785157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51022662-4	11.943700589261	0	1.34625891467908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31757869-4	11.6149237009885	0	1.35004939515687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49272583-4	10.1582541883616	0	1.35005646782663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59615668-4	11.3061034084585	0	1.35071181982889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78373414-4	10.820209843176	0	1.34456799767774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81088603-4	11.0439159886316	0	1.34652476652627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63020828-4	13.7260514219448	0	1.34727562292976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138014319-8	51.5683197285487	-0.988318532911304	0.256335564660795	-3.85556539616004	0.000115462458293088	0.00662769141536848	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54226652607505	5.50959406626645
Merged-chr1-105790503-7	40.9474949153006	0	1.33359354307429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9393606-4	12.3696502187621	0	1.3476999596269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167337337-4	15.9125852379869	0	1.34172304745096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42912391-4	20.4145582488019	0	1.35173044675955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82874354-8	97.3564869184777	0.629296876287497	0.215396242903964	2.92157777593211	0.00348263309702999	0.0952890149223919	C57BL6J_F1_Control-BALBCJ_F1_Control	6.16864251025269	6.82346528693949
Merged-chr3-27439844-4	15.9689517517873	0	1.34676401952177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68058556-4	12.6107653474665	0	1.38284240263097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52024939-4	12.0208192792736	0	1.35328213300969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9828800-4	17.2415791561928	0	1.34608193496657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92318356-4	9.50494949041689	0	1.35167841518902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116638125-4	15.225457810095	0	1.33713112865596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9535007-2	5.1118561058988	0	1.35926312381633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126566159-8	58.3737099671604	-0.321775895167472	0.262122887051928	-1.22757649584306	0.219605989569678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53141951582749	5.22711588940671
Merged-chr10-80692618-9	47.1865264717292	0	1.34018740885854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167754812-3	7.99162438813078	0	1.36133456559641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4977623-8	33.0544583739547	-0.0388043623167453	0.400026426492335	-0.0970044970703677	0.922722823148991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66589917582395	4.6285576817521
Merged-chr7-111373568-4	19.1065563490386	0	1.34269359135652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116893127-8	43.3461356337083	0.192716625973621	0.252388116934433	0.763572502201781	0.445122041105732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36633785013889	5.5033625970526
Merged-chr13-110569267-8	76.6952662706665	0.288231525318163	0.285057814935593	1.0111335673547	0.3119525063271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00568449868812	5.30795121821238
Merged-chr1-176068134-2	8.09233279459561	0	1.39653657799571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149031409-4	21.5353108270765	1.1293672822512	0.73103634131097	1.54488527919952	0.122374014762444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	2.86228010699883
Merged-chr11-117087160-4	8.87760388689785	0	1.3494473155722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32312417-4	10.2100634877149	0	1.34679998355148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52589245-4	12.9102133929533	0	1.34492868060963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84334058-4	14.6570299505482	0	1.34175021646301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121573415-1	2.40706602575237	0	1.44975132782771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-110968716-1	2.19763866103418	0	1.52789950148603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81241244-4	14.1942269023782	0	1.34711362080646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72401407-4	11.7568917257933	0	1.34858546006248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-69689200-4	9.85260187322855	0	1.34081122410326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40992281-1	9.46732807139903	0.363343408345883	0.72236883010763	0.502988768620798	0.614972168650033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25887686095708	2.85476293333406
Merged-chr5-64701949-4	12.4740737354879	0	1.35148486061925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27563953-4	14.1984833533937	0	1.34755324804794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37262731-3	11.8404748269376	0	1.36530673888769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-18925096-4	19.5555472310671	0	1.34790980293213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185187494-1	5.84546771571812	-0.239798445689417	0.735125851317165	-0.326200534588407	0.744272636952536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24934517694232	2.85681071927413
Merged-chr12-35885361-4	13.6914137678671	0	1.35029122295722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29008342-3	14.5368265379494	-1.59555476788847	0.521469309854056	-3.0597289960075	0.00221537353744052	0.0674274860703971	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65009241760564	3.01901030080854
Merged-chr19-17224919-1	3.85648028031866	2.3235589629314	1.18464867407814	1.96139075978752	0.0498334570698715	0.588378994974185	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80659218898308	3.42746130428247
Merged-chr2-12084532-4	14.6012421183362	0	1.34477216095316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52476712-1	1.80125173804127	0	1.76362733522486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29917572-2	2.47832017697555	0	1.60738579350159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40932463-1	1.77121264640294	0	1.58484685797571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118092404-2	10.0874017197788	1.93584741583618	0.77028918893597	2.51314369154036	0.0119660585291738	0.227713234293981	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	3.38238622913283
Merged-chr17-27935308-6	39.4649836201009	0.177791215515408	0.534161965057706	0.332841398575058	0.739254006646221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7337995627857	2.90174811370339
Merged-chr11-103418699-8	64.4924714245439	-0.146994120093269	0.284361141214982	-0.516927592375003	0.605206705362725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01548385071419	5.05141452590812
Merged-chr8-68914720-8	47.0270308812311	0.446752125498762	0.252259550405462	1.77100183037942	0.0765603973469561	0.773271393419396	C57BL6J_F1_Control-BALBCJ_F1_Control	5.58930862485868	6.00131909880415
Merged-chr18-3891074-4	14.397104335057	0	1.34237228088098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53137550-4	10.7878079371018	0	1.34814431905996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59121225-4	9.59032387680351	0	1.34798373879607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34313528-4	21.1564353966658	0	1.34184082885965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9573822-4	11.5100209335834	0	1.35492010716159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38285739-4	25.7245713017794	0	1.34391761492949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12008278-4	16.3170175717374	0	1.34095553705319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30943501-4	9.31645078103755	0	1.34949183468159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28269911-4	13.6094946549292	0	1.3419574462901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9657590-8	78.991044543138	0.311561450652417	0.260618647552411	1.19546875704572	0.231903935938889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51140290610293	5.82015934126543
Merged-chr18-60843916-8	50.8099192967134	0.140958698346076	0.257307432616241	0.547822101028489	0.583814061556821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16836973501101	5.26238914408993
Merged-chr13-81133608-6	35.4594915201919	0	1.33539530619634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79684224-3	13.661384279878	-2.10460494080396	0.834504960576821	-2.52198014419139	0.0116696295080437	0.22351986977722	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21704889399714	0.837303648891292
Merged-chr2-12023558-4	12.2629874346714	0	1.36397770595981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99576082-4	14.0718291623282	0	1.35541515146552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67693773-4	14.3522297764456	0	1.35654538999524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77309499-4	10.8499124643809	0	1.35191051201209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103021490-4	10.5293410719004	0	1.3563226687539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34174266-8	45.4277509835244	0.874457925736424	0.283960579042455	3.07950465760138	0.00207345128331864	0.064222642911634	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62015372924723	6.41803204750943
Merged-chr17-6828038-8	77.488862083984	-0.46495481776551	0.2373086244395	-1.95928327031387	0.0500796218777492	0.590443002855663	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29381224357141	5.86694006768196
Merged-chr6-122669595-4	9.00857187026607	0	1.34637293281844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25651475-4	14.8270431051061	0	1.34885521793216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54888683-4	19.551116932716	0	1.3419058022586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103487127-4	24.1011863315965	0	1.33718081717875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145888161-8	37.0963865922971	-0.189660832406913	0.297171243615413	-0.638220677409705	0.523330038936221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45210597343746	5.27140137663966
Merged-chr18-70522463-9	75.7156578705135	-0.541837108619493	0.304585958342598	-1.77893003199457	0.0752512337226723	0.764969969942597	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01240898432713	5.46554946918512
Merged-chr4-132760501-4	15.4523929523922	0	1.34042241202845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75991067-4	6.60732275035665	0	1.3588406134837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129413768-8	54.6963549363242	-0.706926002856738	0.284777379479231	-2.48238116436595	0.0130507590414759	0.24237315023423	C57BL6J_F1_Control-BALBCJ_F1_Control	6.52147179216795	5.82071330542698
Merged-chr14-60435777-3	24.3396868613093	-1.0809821269824	0.649586985183429	-1.66410681192628	0.0960910860172582	0.887581197079378	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73893482823591	1.92460482503279
Merged-chr13-5888952-4	15.4930165377232	0	1.34151602027315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41552134-4	13.2993168196705	0	1.34938685059806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140814606-2	5.20458496247105	0	1.37680943182941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-91278690-4	18.8660188304928	0	1.34837956211585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21068567-4	12.813306755045	0	1.3565914280094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59734042-4	12.2542251727731	0	1.34096427090367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85853483-4	9.33591422500215	0	1.34864447684911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70287916-4	10.1080790481526	0	1.35149626516003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93175504-8	47.8871407653591	-0.138440622058825	0.290414360408546	-0.476700332118807	0.63357552634674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59799772142802	5.46136491583397
Merged-chr4-59244926-4	11.6265246056888	0	1.34442769041152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172470173-5	30.5571156590625	2.64763718416414	0.408808383047497	6.47647478368007	9.38902987330733e-11	3.5129448730718e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20191471427944	5.78751846696294
Merged-chr13-113508539-4	16.0533542978727	0	1.34064292076225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17614506-1	3.51676159897525	-1.79421023707166	1.15311054338058	-1.55597418423699	0.119714231270232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52860153008918	1.09325667247081
Merged-chr8-105332772-4	7.80174836845551	0	1.39303322750985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59755397-4	13.0489519421272	0	1.34164057801525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52145048-4	13.8488561604129	0	1.34201363347801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58276067-4	11.9020860051077	0	1.34278900261287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3421410-2	5.45370626216245	0	1.42156698596729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108608209-2	6.8777305904806	0	1.35709499310389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-42094925-4	15.5376300833312	1.72097347633665	1.25427864309638	1.37208226083493	0.170037831080031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr8-57800542-8	39.9056977800985	0.692235620741606	0.320795908466643	2.15786923234274	0.0309380002492021	0.431033315502255	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08124350192955	5.87398184341856
Merged-chr13-116000283-4	21.8872663670429	0	1.3547252548588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55110650-4	8.9028937564813	0	1.36062529063338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125122715-8	29.308839730658	0	1.3375644334247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70297030-3	7.64572429019381	0	1.35970761895404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-114949008-2	12.1973156048733	0	1.36646310607157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99999598-4	15.0148177518447	0	1.34406349909254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98803904-4	17.5542604151878	0	1.34340761296683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13627767-4	9.4073859094198	0	1.35668821586669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73434272-4	13.5354641740154	0	1.35511493808663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42254058-4	11.4159605347859	0	1.34143130165117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37506286-4	18.96300473091	0	1.36421183840897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32932356-4	13.1840095129234	0	1.36284946407812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-21705-1	5.51833494188588	0	1.43530919470301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64226253-4	19.4710458825434	0	1.3643766184218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87488109-8	44.7275051318278	0.14876974102844	0.235909463519055	0.630622183651498	0.528287590448333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52280364920329	5.6694219924801
Merged-chr17-35257589-8	37.2254289377787	-0.225540148628807	0.315879373991773	-0.714007204011619	0.475222724815205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43473788057232	5.24728248898321
Merged-chr18-32311948-4	14.386806508668	0	1.35115512850876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95648193-2	2.88849428775449	-0.0353048703752077	1.45843874663816	-0.0242073041851012	0.980687251941517	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr5-102003635-4	10.2535457875362	0	1.34776935020069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98024598-4	19.1081763969648	0	1.34031552666393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83884714-2	3.32613857107465	0	1.39009043749368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86168350-2	13.1517056413617	0	1.34529791717902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-39373265-4	11.2549337645371	0	1.34849435542393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137831721-4	14.6770925509559	0	1.34304850738785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105976367-4	18.0635786366839	0.0663712649326033	0.430882469054819	0.154035658675543	0.877581619541143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75225060332627	3.81221071291242
Merged-chr12-104271645-3	12.6789494483168	1.98834289380828	0.955267080266404	2.08145233399415	0.0373925227198349	0.486738539877276	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.25943793482504
Merged-chr7-129994950-2	6.61351381198924	0	1.38511289545662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103016084-4	18.3668118228456	0	1.35883584066537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24400369-6	31.0578890974544	-0.0362468699660299	0.46308895354069	-0.0782719382289153	0.937611739012423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43248415910497	3.39756063308529
Merged-chr10-123360699-3	9.78921073232579	-3.39970692654098	1.13250398063795	-3.0019381694587	0.00268266657556009	0.0777744386031311	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12139497612295	0
Merged-chr12-69446682-11	98.5306369289851	-0.492048403674838	0.144971652365938	-3.39410081657073	0.000688543396927906	0.0272916316044714	C57BL6J_F1_Control-BALBCJ_F1_Control	7.46640068402282	6.98527548494279
Merged-chr4-89381980-8	37.5898665478293	-0.825397401823303	0.316136362938463	-2.61089042130838	0.00903068249263287	0.187365980769859	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25949328162796	4.04853162062336
Merged-chr10-67490060-4	12.9877809906761	0	1.34735060971533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131430643-4	14.4494774815776	0	1.3577707721516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21808740-4	17.108602512773	0	1.3399759764096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119357503-3	12.2746928670785	0	1.34882535917189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35708030-8	52.0945402171697	-0.0976957969209118	0.256788343504174	-0.380452615518833	0.703609464043397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73306572920137	5.65689616579407
Merged-chr1-180884468-4	9.84651210499532	0	1.3510906454992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159650830-4	16.8964342260306	0	1.36005892352533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91751503-4	10.0683983816022	0	1.34874957602218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116457937-4	10.1081394512559	0	1.34734011814451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27318398-4	13.4859147145063	0	1.35541695422635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56600973-4	12.8164581445015	0	1.34417603476217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121369637-4	12.6790419082728	0	1.34543910557279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70392794-6	40.000540422215	0	1.33799139544683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4521719-4	11.1340693932402	0	1.34824722783211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75490940-4	9.89214210369091	0	1.35382277014125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9717212-4	14.3614834453403	0	1.35343255414713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59886683-2	6.21635263683163	0	1.38674811196221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-163758011-2	5.53513333981331	0	1.38406322330975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121906571-8	50.2709224451154	-0.129819345714587	0.269965705415218	-0.480873470631835	0.630606428850441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14018253250539	6.04383175521211
Merged-chr17-10344771-4	9.0219081328485	0	1.3470985910673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52684475-4	13.1661977811338	0	1.35314647018498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45825377-4	10.5413682017454	0	1.34669381528888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135670566-4	9.95294839497071	0	1.35040304047397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88077301-4	8.01976188191727	0	1.36438172950477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83168605-6	19.2240411782924	0	1.34895214614012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45826998-4	11.6242748741967	0	1.3480535518579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5625520-3	16.3690967167907	0.298911994099096	0.51566873708843	0.579658941100083	0.562144636983875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18987721073584	3.33499767865252
Merged-chr1-45861804-4	10.7941600116781	0	1.35990347719086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70546583-4	16.8657733235451	-0.954505945737469	0.979600700336233	-0.974382669806024	0.329866571010509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.577068348605183
Merged-chr1-144241936-3	16.3680751507882	0	1.35144427275173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35740565-8	57.8784640697836	0.579318990546115	0.247434477946825	2.34130261616416	0.0192165841341569	0.31191447794633	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44190123035124	6.09366593733592
Merged-chr14-33175300-4	17.1042065130626	0	1.34674180761047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146293468-4	13.2820963584899	0	1.3429181984001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3780476-4	9.29763703023711	0	1.34449346726272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21036704-8	46.3893242902021	0.0778169860846529	0.280418085363752	0.277503449835307	0.781393557216959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38082067285258	5.64093192944143
Merged-chr17-17871869-10	106.937450000911	-0.0964178260809381	0.223180347635718	-0.432017545910064	0.665728660840168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.62244713266179	6.55482435779866
Merged-chr4-34466029-4	12.7257992551788	0	1.34889664740893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32738629-4	12.958647554792	0	1.34677452433441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97345356-4	11.2585655626233	-0.0695752194428548	0.854166183251109	-0.0814539615441565	0.935080936528178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.60294768781932
Merged-chr17-26532736-8	93.3159396454445	-0.273717572305165	0.271269121210868	-1.00902591155001	0.312962207529548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53253231575847	5.26721331985088
Merged-chr11-53795406-4	17.9358106096102	0	1.3466531494419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12135240-4	18.5929878950112	0	1.33809574528504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22357980-4	9.16818581418734	0	1.35761688126608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111243758-4	12.1027058098631	0	1.34508685712604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12424238-4	22.0827007219121	0	1.34004524420925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39493808-2	5.2677092616465	0	1.38231190089991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122348653-8	40.8988182117401	0.564110155263062	0.33800953706041	1.6689178659543	0.0951336583783932	0.882097102908603	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69968839414707	5.25000978826306
Merged-chr12-32163894-8	71.5919695651455	0.130401265914957	0.24557435430663	0.531005227655553	0.595415156572476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44110165086748	5.62207187260069
Merged-chr4-137465326-4	12.418615049166	0.0535467801403425	0.635668645586216	0.0842369377696165	0.93286805044769	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04259702247068	2.46604532555703
Merged-chr9-65200777-4	10.7559889437858	0	1.35206353845983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170160341-8	34.9028588111556	0.0738298164882205	0.267837946282556	0.275651070032973	0.782816080446572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36521410314677	5.43832388440991
Merged-chr12-33314200-5	18.5850256412877	0	1.35565613273119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56313823-8	53.2267240224783	-0.0138015235689711	0.28675863551665	-0.0481294087067512	0.961613108599139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92744766273076	5.90717313416529
Merged-chr13-60644799-8	54.1320810078042	0.393997186359932	0.288229446763529	1.36695674499621	0.171638863914885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0676559098257	5.41254025434532
Merged-chr2-102968449-8	70.0170270269901	-0.118112522181698	0.322149003173381	-0.366639415358147	0.713888003380106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59823448218493	4.52160174494407
Merged-chr12-100203628-4	17.8875678137336	0	1.34296712753649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95335896-4	10.2254046875135	0	1.35202915196843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25896997-4	14.885833434482	0	1.33735813782091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21630795-4	10.6672343922248	0	1.34429571533615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64134648-4	11.3763711710077	0	1.36493916364048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4593625-4	9.09490882773132	0	1.36504251157444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87025079-4	9.78852665564924	0	1.34909090070225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23134200-4	17.6352111189903	0	1.34631807424689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61093905-4	12.5296987824075	0	1.3477873057218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108994604-2	4.28826570584695	0	1.3892202714199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71257361-5	36.0269299657813	-2.63383640931596	0.534447133068561	-4.92815144164704	8.30112651851713e-07	0.000108732755763873	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28743657527961	2.11350194101828
Merged-chr11-3182665-2	11.3342860998767	0	1.38738707283724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102879720-4	9.36751695444521	0	1.35154389678574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60598445-8	47.4778293263712	0.117259058570868	0.26219004428133	0.447229256519936	0.654709539493873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17147104339279	5.2706527775557
Merged-chr11-118146509-3	25.0668398684804	0	1.34278135143035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171713546-3	12.5169032873233	0	1.35240017289616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135715789-3	10.4157560145917	-4.45430475199557	1.06089385655612	-4.1986337506517	2.68530228288476e-05	0.0019886968228247	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1302480415236	0
Merged-chr4-134758677-4	11.3039223987203	0	1.34631575129474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121091201-4	13.1430177222627	0	1.35436477477224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129401448-4	12.5557074813384	0	1.3443826059685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32591892-4	11.400007500678	0	1.34002777750314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50490838-4	12.8335397365008	0	1.33982341644441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149504953-4	10.5525067486226	0	1.34669094751091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5769873-4	14.7432164340028	0.116025338866464	0.684511155006515	0.169501019841466	0.865402570250331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01585784396829	2.17884592431967
Merged-chr7-140999062-4	11.0652128606948	0	1.34267044421247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36648066-4	10.6034952567542	0	1.35116677574283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110692648-1	5.16346576182288	-2.11932154454509	0.891130547185822	-2.37823913818001	0.0173955403609823	0.293028874645999	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86081654425478	1.15716269587666
Merged-chr6-145301875-1	12.0807453559172	0.367573695138991	0.471895342957668	0.778930541749306	0.436020631563869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10610386290133	4.68204078411614
Merged-chr4-133690738-1	3.03282150097712	0	1.43304008118824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68981046-4	15.1845928019713	0	1.34604302096921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56070853-4	18.846433923605	0	1.36142756502203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70056332-4	14.1771726672022	0	1.34142882272053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65195785-4	18.5559340379485	0	1.35929353262304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9801841-4	10.2784259972159	0	1.34811739913463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5511539-8	46.3894407193525	-0.163792723635331	0.268309251524306	-0.61046245220692	0.54155550886212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05486113376622	5.86205268566818
Merged-chr18-50096664-8	76.1455154085815	0.448940095344649	0.255733726627042	1.75549819441444	0.0791741292318117	0.79016716666202	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33539518350439	5.87154487620868
Merged-chr1-21014638-5	34.1745271509899	0.292928418083181	0.623434651659546	0.469862265922214	0.638453424951431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22781771998735	2.35612604634828
Merged-chr7-34448567-4	15.9837394173322	-0.68175221389517	1.00669097173632	-0.677220947675032	0.498265778859599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	0.859510663435501
Merged-chr14-76927531-1	4.69688282249553	-0.481789614573234	0.809408110980678	-0.59523694912014	0.551685095122615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99624464073807	2.58934039553399
Merged-chr15-73442587-4	10.9332092963515	0	1.34674473165623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43395488-4	32.1110197927132	0	1.34456805857211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105498887-2	4.20789674241982	0	1.38197062172453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48204629-4	13.0627552643749	0	1.3448291697109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34269215-1	1.93947948361393	0	1.48932463111248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21768692-4	10.3042889397826	0	1.353155444358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111774045-2	6.58692221795354	0	1.37808822980215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13600933-4	9.75380551182191	0	1.37312540008444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114874281-1	2.18219686931155	0	1.42703538419895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78373002-7	42.8959582565391	0	1.3352661121442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100729233-4	15.865230589155	0	1.33839375965773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151817082-4	15.7820806753326	0	1.34958222736948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25794974-4	12.1918858015975	0	1.34178711805704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86394466-4	15.6652431581225	0	1.33843624518697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98328488-4	21.7919042137271	0	1.33671245385106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110681331-4	12.5748301197796	0	1.34470075912765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125685623-4	9.56494373313322	0	1.35089042972237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61424451-4	10.2862901972537	0	1.34620376141722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86378848-4	24.2360989469618	0	1.34099069588067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122811904-4	11.8042749426487	0	1.34711722279291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151270767-3	9.5022527450822	0	1.35130420588606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83442655-4	12.1333019954335	0	1.3470835288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68175876-4	15.5996725522984	0	1.34501259496922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31029923-8	76.504124721967	0.124492460893795	0.241164697107558	0.516213452412032	0.60570533571746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41263871948489	6.59429741832064
Merged-chr13-28843026-4	12.7785441508295	0	1.33848527304743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135240575-7	42.2476433298917	-0.674129499051243	0.322376630887544	-2.09112396638453	0.036516952831577	0.480277629928903	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46053669914228	4.73112970846615
Merged-chr4-40823792-4	14.2223280574349	0	1.35687402626948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102558037-4	14.0572798099254	0	1.36059824253512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8644163-4	24.3232698677012	0	1.34578894805518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25129012-4	10.6267513528785	0	1.34613280343234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5302577-4	17.7366381261958	0	1.33866911442358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43398004-4	14.1095217939227	0	1.35592283852601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37903354-4	9.06092570776893	0	1.34765208875483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121230098-4	13.0644181542781	0	1.34955102289946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60738729-4	12.5976860721913	0	1.34179427399514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25283921-8	54.5871611619874	0.0408167096418601	0.24492879578068	0.166647247465378	0.867647615373004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53036115659367	5.56699408150623
Merged-chr9-110685772-4	12.8327577594372	0	1.34305762364116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-144003008-4	15.4026193175973	0	1.33864162147388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55969643-4	20.8979924966947	0	1.34292938793124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114968928-8	126.159919605424	0.00230304097578653	0.21662371888649	0.0106315272751518	0.991517428326328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.69346403893849	7.67475378190239
Merged-chr1-39469189-4	9.60950545206816	0	1.35357389592224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121793734-4	13.0249458515243	0	1.37273950181733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160091242-4	11.4022162125297	0	1.35548811693729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46869556-4	13.6801571672762	0	1.34919011627341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159591764-8	23.2414970520621	0	1.33736832063094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63370086-4	13.0119311076229	0	1.34552335565319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108651275-6	31.0378187247542	0	1.34049378944882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54867581-3	10.6554763113231	0	1.36502139780929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44284235-8	70.2375704356262	-0.262071401524245	0.284209013873364	-0.922107986487075	0.356472251537972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79454174372278	5.53120619010691
Merged-chr17-27826336-7	68.0349291880104	1.72526935677323	0.352582806168715	4.89323167944743	9.91935206858827e-07	0.000126574192276148	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47010273003485	5.36182502619964
Merged-chr18-80464944-4	16.1390729123645	0	1.36000910129147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39140745-4	10.4718047830681	0	1.35391185423659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46640022-4	14.9795905374358	0	1.33778459654833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92287149-8	48.1056169461599	0.582052944323317	0.270069346820928	2.15519810439373	0.0311463351982031	0.433511907314038	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75319650075086	6.3163664913335
Merged-chr19-9082675-4	9.41960853531079	0	1.34542176644843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119827954-4	14.1839224599254	0	1.34650737830873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64023904-4	12.1104440954416	0	1.34592182971955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28294626-4	15.8556037743983	0	1.34598166461854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40784217-4	15.8050245933676	0	1.34495559188433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87394046-4	11.6326116185227	0	1.34128191418347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99216882-4	37.2562686248925	0	1.34734260091815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143537216-4	9.77053598843379	0	1.35494360815675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-31050501-5	22.3026894806588	0.158323925445113	0.671829675386168	0.2356608099428	0.813695882556917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35476919581267	2.38349950306539
Merged-chr19-10290502-7	31.2929950554696	0	1.33866902229399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20108060-7	42.9629117175475	-0.284407753560419	0.433850702954356	-0.65554291285853	0.512118266793586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74568385460741	3.72480648831785
Merged-chr7-90043628-8	53.9721121950882	-0.166487505760592	0.283367765991113	-0.587531560543881	0.556846760471483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.37236922659363	6.21470527390879
Merged-chr19-55689715-8	47.1795049768664	-0.422469211725923	0.287875887179596	-1.46753941729881	0.142229374672796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84775452927386	5.40886178355596
Merged-chr14-73474994-4	12.4875752940279	0	1.35023753044821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151997774-4	14.2076759527897	0	1.34596560266902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115150024-4	16.1270478352033	0	1.34005023887222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125390188-4	22.9210331792958	0	1.34287698364765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149947807-4	9.79490755092466	0	1.34773826028166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153275135-4	10.9411675913598	0	1.35495416215055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76590017-4	16.1251119997015	0	1.35172183801922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118506817-2	3.35489659886704	0	1.42801967376628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25331468-2	10.104525241141	1.97795412774539	1.05625459359338	1.87261114862126	0.0611221007026668	0.674763662082913	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.97656658922368
Merged-chr19-43520584-8	50.8461770795051	-0.0713113949404486	0.261327376256189	-0.272881456057399	0.784944341653896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.27218392484049	6.15822585066046
Merged-chr6-91705610-5	25.3181108410947	0	1.3799208117607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17600182-4	11.5230890406856	0	1.35006929725105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115192361-8	58.6908440097957	0.411285116704359	0.254906330125534	1.61347549314218	0.106641243345591	0.949068655373767	C57BL6J_F1_Control-BALBCJ_F1_Control	6.5643358149455	6.89578088669839
Merged-chr17-87302513-4	11.0417828485548	0	1.35331863276284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6469395-4	10.005950807458	0	1.35524965922408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127163002-8	59.9033275756306	-0.180926483511479	0.267127040012202	-0.677305013761295	0.4982124504445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4101029452758	5.20088347069057
Merged-chr2-169700455-5	23.5556390456668	1.09548440831484	0.684928005736677	1.59941541175059	0.10972833009412	0.964275773779112	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76171389311731	2.51235881042827
Merged-chr8-70865751-13	122.48022391762	-0.220897017978756	0.228584104567178	-0.966370861162997	0.333858639406104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.28292005915062	7.04211514478423
Merged-chr1-87625478-4	15.5210303758995	0	1.34015030169338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59636894-4	9.79028158013664	0	1.34541131522239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38641395-4	13.235761202536	0	1.35515591876296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130030050-5	51.5639142443509	2.18282140673982	0.347144270302521	6.28793730294782	3.21711780006992e-10	1.01086304331792e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81775761019942	5.87480230127687
Merged-chr13-28824210-3	9.84963300361815	0	1.35366338501784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19845291-3	9.26116797448084	0	1.35596543609824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84199103-4	11.6557782092033	0	1.34892840478825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105967751-8	59.4843559401532	-0.0797505107660757	0.258407966912764	-0.308622492250785	0.757608709218561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.25165197126314	6.1234482168892
Merged-chr12-3344901-4	14.0911331710253	0	1.35557398695716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143991367-7	17.5101493678201	0	1.33710099538483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99288054-8	37.5567093622596	0.158813897553659	0.270655592518762	0.586774860536643	0.557354922864945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2736673501114	5.46842748223551
Merged-chr12-51968068-4	15.3186415293804	0	1.34672917380595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20151757-4	14.598088790547	-0.123312443922413	0.600042384601795	-0.205506222704996	0.837176636838129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52352953733079	1.91539609430116
Merged-chr4-8666859-4	8.31709390335399	0	1.34672512965471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12121930-4	15.5080187048817	0	1.36191536258494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95945636-4	11.8205813840938	0	1.34476151912628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50244024-4	13.6788445159617	0	1.34486118275865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43847702-4	21.9013579262318	1.19713363970314	0.664440930808432	1.80171567432876	0.071590150715557	0.741814056750294	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81518459389541	2.66494980847066
Merged-chr10-75675825-4	12.4041225894189	0	1.3577315283703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59829948-4	17.5400038559736	0	1.33951509009452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170742602-2	4.78480329048273	0	1.4261383218225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23445901-4	10.5359351744931	0	1.34569988546973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92145613-2	2.25831900100708	0	1.68897343543202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121747148-4	10.2671033231185	0	1.35185124442426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58586197-5	32.8931031750328	-0.742960132114753	0.5844433354319	-1.27122697286934	0.203647913448802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45391569783273	1.72466273450451
Merged-chr14-66844824-8	72.5289644260539	0.122212428931996	0.263608128436578	0.46361403821961	0.642924294768712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.94822973454276	5.9326691828325
Merged-chr3-148325107-4	11.8801033797663	-1.1056045780911	0.829049716838929	-1.33358055088257	0.182341360478636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07721457594951	0.730937814817307
Merged-chr16-24773957-3	9.77249899215435	0	1.34903348583617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106007328-3	5.79102498983468	0	1.43788043201034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73745149-8	70.2104108415745	0.102394391109381	0.304908014613574	0.335820595726716	0.737006158086543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18575805173859	5.30759145797574
Merged-chr3-101601033-4	12.5856304496756	0	1.34187470811457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115321534-4	13.6099800649938	0	1.35825395072811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-100211266-4	9.80079139626087	0	1.35833662477984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106305999-4	11.2007156671508	0	1.34166461454734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115693706-4	11.8379441382635	-0.0352033520856687	1.10309447453658	-0.0319132702577066	0.974541215895358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr5-139465097-4	10.6106716427344	0	1.35414111455824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86233984-4	11.1440891559405	0	1.34611281375229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145342974-10	69.3104727716296	0.478303238872418	0.200166533332437	2.3895265152944	0.0168701060648398	0.287834932698878	C57BL6J_F1_Control-BALBCJ_F1_Control	6.22101188627599	6.69769073002865
Merged-chr18-53904430-4	10.3571906812802	0	1.35335602593192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146675019-13	208.14895141427	0.274351761203164	0.152191274060366	1.80267734071496	0.0714389028164299	0.74109681645006	C57BL6J_F1_Control-BALBCJ_F1_Control	7.794203163026	8.05654763371124
Merged-chr7-16207552-13	114.881889477711	1.9032118781943	0.199590290037977	9.53559352928523	1.49030607105169e-21	5.40076984775324e-18	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4100012293617	7.38517155046671
Merged-chr5-59847851-2	4.52722538285304	0	1.45032884245381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50437931-2	6.76290116628933	0	1.38295877999576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92021843-4	9.56170511601288	0	1.34360625262577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118156739-4	16.4839129396108	0	1.33861027492142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98026214-4	13.5339416809939	0	1.34454898650664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5802461-8	48.8934310755444	-0.0188148490288437	0.33710921541556	-0.0558123248148241	0.95549131646703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14512194554955	5.33726618897573
Merged-chr1-39580966-4	9.94271944483146	0	1.35840985161333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150176426-3	17.9726091277684	1.37669370888016	0.48660883598648	2.82915887889552	0.00466705235726366	0.117180738609005	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65707512103572	4.87374021769174
Merged-chr16-17727404-4	10.8472167354228	0	1.35605393368713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72182939-4	12.8550845118854	0	1.34717656293274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17902426-9	76.9047403814729	0.846034270533572	0.337212280660878	2.50890705663356	0.0121105344678642	0.229618605908138	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93185285441602	5.82469375635233
Merged-chr2-60046221-3	9.56317108489777	0	1.35168750399272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23935555-1	6.42337451373137	0.371734537324433	0.802886089980341	0.462997854818403	0.643365904743854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0837505008635	2.22640535030318
Merged-chr18-34989481-8	28.5102508101663	-0.37709121446318	0.315699214591119	-1.1944635812654	0.232296678487125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2521266736587	4.88289075278763
Merged-chr5-134106057-4	11.0911864125328	0	1.34316886301547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100622428-4	15.509943897329	0	1.34608116478996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135535507-4	14.351820291877	0	1.34319011382032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79321102-4	9.37696726697403	0	1.35351334504739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-21565536-4	11.2024909741344	0	1.34752612702195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141409043-4	9.93725945681263	0	1.34744442217888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78481126-4	12.0927445406724	-0.0361248438080008	0.742245332820703	-0.0486696813177903	0.96118253803406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	1.85774282263707
Merged-chr11-106122897-4	15.926795753748	0	1.3431800190915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180343051-4	10.993643811033	0	1.34895958159478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23983607-8	38.6213282049805	0.0395429420410459	0.341355139727308	0.115841062398049	0.907778506475639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57341761406087	5.60363261718592
Merged-chr7-141048431-4	12.3966528575161	0	1.35869069483061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106759238-4	11.3986585674494	0	1.34558824413199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57557437-4	12.5090483695484	0	1.34572504865547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-71731211-4	20.2039237633886	0	1.33814256383224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30938873-4	11.3379079191229	0	1.3420619262559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101725180-2	8.29127906590402	0	1.38076913708527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6695608-4	16.8709310527822	0	1.35381140523665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111418212-4	8.93701940726982	0	1.37276003891136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130903100-4	13.0807088665936	0	1.34595342518046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21125720-7	25.5167489192245	0	1.33312359978211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155563074-7	55.762553222779	0.835229400487529	0.435107004665114	1.91959539040374	0.0549090267645095	0.628908509458907	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77439072745571	3.75335702661512
Merged-chr12-12231892-8	33.6057327251792	-0.177741637561259	0.279385999485832	-0.636186630283428	0.524654786287983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13051222816662	4.92763170489587
Merged-chr10-119055845-4	13.935687589145	0	1.35211684253882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12300343-4	9.34606936567532	0	1.34569870413262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55815557-4	16.0821660915147	0	1.35695469117827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21988208-5	19.6530823332172	0	1.33880463425495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45472169-8	61.187023583908	-1.01740358887876	0.370368530517479	-2.74700333599414	0.0060142522744473	0.141039145550768	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74788399748099	4.70307941698904
Merged-chr16-91613151-4	14.1217761970872	0	1.34014820392833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159912284-4	9.69062318109189	0	1.34588387310677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123891900-4	12.4005144580186	0	1.35846095031423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78115506-4	13.1180677259318	0	1.34069183069001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45880997-4	10.9058329427974	0	1.34566631316297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125441866-4	12.7417650137138	0	1.35295875939182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58604809-2	6.06624352639614	0	1.39232447882899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47174987-7	24.1521490416298	0	1.3410633165299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80816613-4	13.7212134090192	0	1.36276266523497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65583253-4	9.66817968490786	0	1.34874996430882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57926145-4	9.38030255996195	0	1.3434753878587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136654537-13	143.501000658916	0.297039163393223	0.169095632186947	1.75663415755663	0.0789801869291878	0.789206614206566	C57BL6J_F1_Control-BALBCJ_F1_Control	7.55990053866947	7.85220204745973
Merged-chr10-81390013-4	7.8785865409602	0	1.34304889836061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70830338-2	7.51133692860322	0	1.36308356174431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79744311-4	12.4543620268583	0	1.34593485542583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80032979-4	16.5095750979829	0	1.34211603205846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116268870-4	10.5685924615734	0	1.36323922826182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99198103-4	14.2810168673174	0	1.34560072330568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32565133-8	37.2648196588803	-0.247060421334314	0.287822446355427	-0.858377880053259	0.390683837809104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47226754583912	5.2200740883596
Merged-chr10-118883548-8	74.7459272984139	0.0486132691151188	0.364328111386515	0.133432660274587	0.89385121717566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12327869723762	5.1359176926664
Merged-chr11-96862128-8	47.3846745070405	-0.0938491443405537	0.285276582173525	-0.328975984027557	0.742173840586971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6447648987925	5.51747207363811
Merged-chr15-39670188-1	2.79289895026266	0	1.48326554528054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44381677-3	11.5199138080493	0	1.34350289739477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35215000-1	2.46219371658224	-0.42355844064317	1.34151873701021	-0.315730544015462	0.752207040915029	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.55634759613363
Merged-chr1-87632344-1	3.19592420271141	0	1.41440641397119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105626395-3	10.8516593447528	0	1.3511380212856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61322580-1	2.26845877779703	0	1.58160723670119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44390225-6	45.6792045791245	0.276615375171798	0.533638070977622	0.518357647656285	0.604208758506423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0526081795128	3.41214721848664
Merged-chr9-56107753-2	2.66030205005367	0	1.46972847113951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44378509-4	9.00950459867487	0	1.36321502041344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38025180-1	15.6901794227918	-0.185851792110049	0.515484205865629	-0.360538286130331	0.718444630798102	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27112514778619	4.44695122715243
Merged-chr19-6459705-4	14.1673207264462	0	1.34134100534934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117082927-1	2.13414223709069	0	1.521119847637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73324520-3	5.18214934894438	-1.88777038555494	1.36391964641736	-1.38407742018644	0.166334750008435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr15-27672346-4	8.48292629648596	0	1.35679677402331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85513818-3	19.145709343783	0	1.5186420409399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51839459-4	10.6035275720079	0	1.35259066319265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60978718-4	9.73184483201605	0	1.34599549747892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27405187-6	23.2021188896534	0	1.3391747360076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117684900-4	14.0544842035606	0	1.34519753731261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12472103-8	69.7404768676603	-0.278064490912893	0.226073803671036	-1.22997218783256	0.218707519875125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.72631920431449	6.42513540079319
Merged-chr18-65440416-2	2.94646039262906	0	1.47359829618009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-34069158-3	7.89732307312246	0	1.36100461037827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34176463-1	2.91034657330627	0	1.42790157812751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-101229123-2	2.98116935079335	0	2.02327749824502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77468634-4	9.55082339466691	0	1.34768088214965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43670777-7	41.1886849163567	1.30032529699949	0.367531128366864	3.53800044849949	0.00040316937354224	0.0183090091699103	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65525490554892	4.96159609048831
Merged-chr3-9034657-7	78.0041153858757	1.37112657645601	0.249099838131058	5.50432544133018	3.70584434108997e-08	7.18715868773802e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	6.35144962773896	7.76706633173995
Merged-chr12-80063953-4	13.7375114587804	0	1.34138142575304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62245699-7	26.7549582960847	0	1.33796344997874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40595317-5	40.7533618846238	0.0346872424870336	0.691400804791004	0.0501695141901358	0.959987305101541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58707500045288	2.52903522822522
Merged-chr1-84883133-4	14.3645454734865	0	1.36324735202195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14640736-4	7.90071261312019	0	1.36033721528203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86166377-4	14.1801011618296	0	1.3524103595076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116227886-4	15.5566292921812	0	1.3441299777307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40900184-4	16.1728262653255	0	1.341639453771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146158191-4	10.2318442831075	0	1.34471233518675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91483638-7	25.8403860938835	0.432169633800847	0.424903379613834	1.01710095644242	0.309105405359846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82478561311438	4.1079791067459
Merged-chr4-83264947-1	6.2539114184086	0.282998651998322	1.0668381953303	0.265268578906385	0.790802568081097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.40024388691264
Merged-chr10-9739301-1	11.0872992559188	4.19780999642275	1.04149604181546	4.03055780135798	5.56446426884293e-05	0.00362249955916207	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.61871129346697
Merged-chr8-35433965-6	25.3905195615476	0.137890657667277	0.462409744068563	0.298200155675853	0.765550402982036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55237769814203	3.63885231761842
Merged-chr18-23894376-6	32.4469223537836	0	1.34530303291379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45038484-4	16.1629704220672	-0.264977018098989	0.760765479009932	-0.348303157030513	0.72761252314852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36540726817539	1.75589456049906
Merged-chr3-105721978-8	64.0787241971699	0.116242697593612	0.266645531224279	0.435944668038853	0.662876875594787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51053679954144	5.6530662665593
Merged-chr5-44052744-4	27.7718970214692	3.16233990854039	0.457911328820641	6.90600932867299	4.98477216389074e-12	2.50895583386053e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11586815623841	6.54743587381102
Merged-chr10-117839104-4	11.5747839478072	0	1.35496331198144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87817046-4	16.4398812717018	0	1.35016967428661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122164248-16	134.650901393717	-0.0619437810712871	0.166403233996584	-0.372251064979655	0.709705929161166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.07896096431052	7.02623798994672
Merged-chr1-59186497-4	19.9936910569969	-3.73311743354717	0.552139157287262	-6.76118942892677	1.36863436938592e-11	6.14856162689662e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8835377722347	1.88744669294464
Merged-chr11-20159148-4	15.5484047855899	0	1.34759093064941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97757396-4	13.747877937794	0	1.34151116876773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83929325-4	13.1785508796247	0	1.34990761436219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19171999-4	11.3460102004975	0	1.34768009162701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108691963-4	19.3606047514576	-2.21957395839004	1.18209566916943	-1.87766017275875	0.0604276683795917	0.669681473077721	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0
Merged-chr14-30746520-1	7.10461009504481	-0.0349642601466812	1.04126730949241	-0.0335785631873197	0.973213216725353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	1.06872581468896
Merged-chr1-105805779-4	13.8457488374179	0	1.34550887568843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65010319-4	12.786651855418	0	1.34155114907658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54776308-8	57.0550936642734	-0.596336912221626	0.280545017388516	-2.12563715361155	0.033533483523039	0.454802053600019	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60898315772452	4.99199291181689
Merged-chr12-110458878-4	12.7903625206772	0	1.35082008035442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17631578-2	12.7014232367984	0.174809193645708	0.666691115310843	0.262204174663709	0.793164035046038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90726132930557	2.39573989605625
Merged-chr1-170702495-4	12.5635463354547	0	1.34867256592382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114723310-4	17.6278893011361	0	1.35810351764744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36708602-4	9.6453639526378	0	1.34671827462128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121196947-4	11.2565322581189	0	1.3516554628813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119844827-4	15.2899448946972	0	1.36968982961527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33073168-4	20.616607251531	0	1.36074340237754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61451058-4	18.3638224167604	0	1.34980196340727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69205812-8	102.812616330733	-1.28000024663116	0.254520488724483	-5.02906564829348	4.92875636892639e-07	6.86980172970435e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64961114756717	5.37434062496554
Merged-chr11-32324758-4	13.4972339623122	0	1.3388499964067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31385455-4	11.1894308872409	0	1.34224994372498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133512801-4	12.2924163197109	0	1.3547265992376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17691894-3	4.70611825659735	0	1.40461538397633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91210189-4	9.42768067185691	0	1.35246052055343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-38741593-4	14.0534236441339	0	1.35865453033428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78626839-4	14.6507802933579	0	1.34012854072991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158154198-4	10.3722131742575	0	1.35353237249762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74908485-4	15.6898048886757	0	1.3554537615369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150913963-4	10.906974385136	0	1.34549262983264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120825185-2	11.8529020341338	-2.47327296885468	0.818088973645337	-3.02323225044091	0.00250090227135657	0.0739643887751208	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04570681189271	1.46494528794689
Merged-chr2-163932392-2	8.02334044895019	0	1.38058001434135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72917614-2	6.98960928284836	0	1.39359167903612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66895486-4	10.0418701836405	0	1.35081348535603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84409063-4	10.1333449615669	0	1.34339873187988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29004180-4	11.401634591337	0	1.34719854245557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116139775-4	16.2069552358388	0	1.34827458903904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79058704-4	11.8029590930606	0	1.35246230143969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49791205-4	24.6244090646547	0	1.36176603765366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113776347-4	12.7624108643673	0	1.34467723217423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-82073588-3	13.3053479372138	0	1.34559308650763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87026699-4	12.6902919313543	0	1.3439734222986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134619293-4	24.4227385857542	0	1.34225686112153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44005061-4	18.9006944412518	-1.35359823238448	0.937688340733799	-1.44354811037237	0.148866130091801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21225560339436	0.723581231604105
Merged-chr7-121333176-4	13.1710207230072	0	1.34588291668173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66857188-4	15.8057209338023	0	1.34347560635935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59214881-4	13.9900899988492	0.0196325530252509	0.54144702997897	0.0362594158583037	0.971075510097659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05750724623645	3.1682726129075
Merged-chr13-111896526-4	19.0878831960476	0	1.35871669522513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4346975-4	10.8825392544586	0	1.34433920098865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163413402-2	2.74397303327939	0	1.95769659073194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34433108-4	7.29976630695578	0	1.35612909566891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29114079-4	20.9331399742861	-3.97166932130674	0.550255387333893	-7.21786539982887	5.28099474896758e-13	3.74892564029458e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	5.97222934150899	1.51301315377886
Merged-chr11-75054924-4	25.5970941589416	0	1.34207359176225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105500785-1	8.83064417075095	-0.342903582950676	0.765179696930939	-0.448134711788654	0.65405597781097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04449627883859	2.24843468403287
Merged-chr18-78312303-4	14.5431918213822	0	1.34407760304078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65528108-4	19.1570697609446	0	1.35305752971397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71289684-1	3.87689273790254	0	1.42912363411427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32403347-4	19.004768270194	0	1.38152272379206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119040422-4	11.0468425256038	-0.126392353970557	0.600015388826408	-0.210648520561735	0.833161547772495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32240838767146	2.88815034409761
Merged-chr11-116620767-2	3.2197825736094	0	1.57583387734097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64242496-4	10.8172055401557	0	1.34679757372373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64927154-2	3.72251004586277	-0.0295211847627274	1.36530164630021	-0.0216224633162392	0.982749114584307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr7-55870531-3	8.00972616127349	0	1.3534976072763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5614383-4	30.5125566180963	0	1.3638314726648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23217602-5	20.7589135189362	0.138588579301014	0.532132411861503	0.260440026226188	0.794524371427866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98095685408011	2.62632718997788
Merged-chr15-11972052-4	9.96625028801705	0	1.35019092406705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88069977-4	12.5761558266697	0	1.35270212938951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29290323-4	12.71176345387	0	1.34735368528329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-19980011-4	13.2744194379979	0	1.34316244750943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102906071-4	12.1339353755277	0	1.3428374837801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165642026-4	9.09139020841194	0	1.34708658428426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135820385-4	9.58842772541956	0	1.34365696522011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116073127-4	18.6416220989593	0	1.35525876759944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-21036649-1	6.97832808865985	-2.1219952119966	0.932501811096557	-2.27559366292413	0.0228703409759308	0.353184336679155	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05264649967201	1.18984215491549
Merged-chr17-88511445-8	36.5559899446174	-0.252804846101334	0.295572030145824	-0.855307066695757	0.392381176408594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28675418472595	5.04230210562461
Merged-chr7-123170585-7	30.5943307319495	0	1.34008118184114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8635621-4	15.3913111077495	0	1.35579582156345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142826905-4	14.0129046528095	-0.0350844465662537	1.12819527667263	-0.0310978491859386	0.975191504942417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr2-166469162-2	11.7225841439329	0	1.37788875993976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50964249-2	5.50305822694092	0	1.39364702560936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67252573-1	4.52308939121786	0.3216341976832	0.913083772804979	0.352250480473598	0.72465042191466	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961371261847668	2.48629754829693
Merged-chr1-173977817-3	10.0553565013208	0	1.35291928818076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31108409-4	13.0969304847506	0	1.3476192501092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-22022458-3	6.47037541700592	0	1.37799187551496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145952870-5	40.0021330561008	1.65765765398177	0.294488401569333	5.62894037642259	1.81320056983888e-08	3.89580117691192e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92389665011585	6.65573998000127
Merged-chr15-25605576-4	23.8753502692348	0	1.34050617408453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77467279-4	10.6432126709103	0	1.34485666177348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77656082-4	17.3868127282445	-0.207988391247677	0.47729422391063	-0.43576557357757	0.663006823960719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59379492644403	3.40890347157532
Merged-chr6-125360198-8	82.8781631032222	0.707096574713755	0.222280405423181	3.18110169615523	0.00146716117037513	0.048511809039186	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66179439021815	6.40043010548647
Merged-chr2-120632187-8	50.2582064953677	0.141853945054527	0.275241719794268	0.515379518630231	0.606287841795469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45018107782385	5.64749157940154
Merged-chr15-53283157-3	8.3226465476758	0	1.37187726554463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103471746-4	27.3897208919549	-0.0375825510335623	0.864495408376851	-0.0434733957744508	0.965324171566662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.40024388691264
Merged-chr7-110796806-4	15.2255233221753	0	1.33743549711298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59438111-4	10.762119959099	0	1.34472875751192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127978242-4	11.4781182324145	0	1.35043487182266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86130013-2	7.39560857650849	0.35527549922132	1.08130853209787	0.328560710172186	0.742487749394856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.815004392037195
Merged-chr5-141056215-4	20.6307574552989	0	1.33537791960691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-32903411-4	8.44343204349232	0	1.35002385047202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64957714-8	63.289564504188	0.72896371588399	0.260810708658331	2.79499150795588	0.00519010785178704	0.126913662939852	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80826626632778	6.49392661672682
Merged-chr6-83475675-4	11.9573538371123	-0.528781390414698	1.19590940330751	-0.442158401758739	0.658374585478909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.55634759613363
Merged-chr6-129703526-1	7.23640280396963	1.55425759795451	0.870757373410726	1.78494910914913	0.0742695719279497	0.759483953055552	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.80621469843146
Merged-chr19-46648758-8	62.4298232600286	0.00565696024551298	0.245065651413628	0.0230834481000563	0.981583708671954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29568960842565	6.27849553800968
Merged-chr5-123061481-2	9.92958374698699	0	1.35179833052333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54735719-4	12.7107277230369	1.51747638080673	0.936610366035356	1.6201789301459	0.105193846109503	0.940963021337253	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.67285245412069
Merged-chr1-106162802-4	13.2924707029886	0	1.33908001718087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106135063-4	23.564364768234	0	1.33600112327526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-77270874-4	11.6879553817216	0	1.35726873680812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125214003-4	11.2216874308245	0	1.34755966825091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32676758-4	12.708933215121	0	1.33799506755068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-121028830-5	17.4689712131325	0.208777620772929	0.864894336206628	0.241390898324776	0.809252166302475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42539729206526	1.78042541828092
Merged-chr10-59266297-4	12.1658754698185	0	1.34974933687811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10702986-4	25.7121335453548	0	1.34104115449162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150896024-3	22.2383794145073	0	1.34966906908924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55741538-4	19.0896515969889	0	1.34489588825096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101783504-10	97.3054684645679	-0.0804986201909216	0.192711352113416	-0.417716026109069	0.67615475358656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54470222468651	6.41833875180604
Merged-chr2-181659725-4	9.45503795287936	0	1.3426642573101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9022817-4	14.9259433801478	0	1.34188137272527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48818033-4	13.2411418597924	0	1.34122552406553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65655645-4	17.376901190297	0.644066670247474	1.00669656731537	0.639782324841986	0.522314125201904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03338881410105	1.19201838126386
Merged-chr7-19267277-8	42.9181053536615	0.148375053389274	0.24719751767388	0.600228735245715	0.548353805538706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32939099873796	5.49923657926705
Merged-chr10-13301162-11	141.702511711514	-0.173953663284896	0.214595033580982	-0.810613649263465	0.417587575979526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.85411521040723	6.7024018582108
Merged-chr10-118096244-9	128.405517976612	0.0724744796237424	0.211749392866501	0.342265347931526	0.732151210842895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.51200671817105	7.59863031392547
Merged-chr15-6626268-4	15.0345515928867	0	1.35791650022401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99177154-8	55.8067726998925	-0.231566801074761	0.254919376303179	-0.908392309886069	0.363670987244237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.6325369537239	6.39954754221775
Merged-chr4-126153064-4	14.2674082136987	0	1.35009443586868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91002411-4	11.3875318131221	0	1.34756699395803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91209101-1	2.52145206264956	0	1.500752254032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98799006-6	31.6057740013855	0	1.33868266888452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96305159-4	10.7046077996194	0	1.36517393924006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57837585-2	5.12386756878833	-0.0356290192649608	1.40175574496896	-0.0254174233940806	0.979722013738644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr19-41780324-1	4.74818585340459	0.830154348598014	0.872386417238017	0.95159018090434	0.341304863240771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27641180929709	2.3470985339175
Merged-chr10-17215660-3	10.2314161513748	-0.969139962808666	0.777348490424535	-1.24672521365467	0.212498270457424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35972355266179	1.7902295787826
Merged-chr13-9454534-4	14.3416542036779	0	1.34842716652933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38527119-1	2.12740195765601	0	1.60195270807725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83075160-1	1.62531263064234	0	1.68592248836088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85477937-2	11.3783523370723	0	1.4202575632899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32518525-1	1.19149265913235	0	1.76873885482546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125575889-1	5.77998927772442	0.334755921234578	0.837172209887644	0.399865066327876	0.68925590354588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49077112886706	2.94239072553214
Merged-chr17-81524874-1	2.43471940544486	0	1.44520218069378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119396417-4	12.738551501041	0	1.34273728776151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34188481-5	21.4402698670114	0.390132602808866	0.553756450695111	0.704520195329816	0.481108877803938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45400388430303	2.77775226870143
Merged-chr2-167260575-4	17.8668617461539	0	1.35323185998226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109464787-8	61.7802320724442	1.12009693192071	0.342537377788055	3.26999914331617	0.00107547810073249	0.0379622818686477	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77117545181261	6.89175153724467
Merged-chr13-45968362-4	15.9296166314694	0	1.34192262387979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76195494-4	25.6092689155713	0	1.33790868525697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108710125-4	12.1158480979407	0.268980125034463	0.786114816290516	0.342163917357155	0.732227537922708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.82070600302968
Merged-chr2-59462259-4	10.8374888928004	0	1.34885227856196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97839726-2	8.5538650423666	0	1.37576888203732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34173528-1	6.88773450498152	0.0924835247438079	0.674081311676183	0.137199360287614	0.890873216545938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4555271198677	2.16077569929116
Merged-chr5-64298448-7	32.9285885543914	1.29077401327475	0.349342431389435	3.69486754912929	0.000220001440057421	0.0112218516834404	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24587967066357	5.47182807402231
Merged-chr1-36436834-4	16.4984559063551	0	1.36056466892627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90397081-4	14.3918777902784	0	1.34801605101346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50588144-4	9.69166751756314	0	1.35241728669047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66264975-5	41.9474450718549	0	1.33548599305306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59731316-4	17.9491555350446	0	1.34223568961521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41005902-1	8.1659232434981	-0.552477066624308	0.700836373104193	-0.788311063504363	0.430514777855567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9852853107353	2.90672280706949
Merged-chr15-35152682-4	12.4251875902555	0	1.35662418622796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22124443-3	15.8243649326646	0	1.38434842070854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66915616-4	13.2217992810785	0	1.35852081088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118798339-6	25.9925548107191	-0.95553269905474	0.844873506532908	-1.13097723110758	0.258064674868412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	1.02674429890598
Merged-chr19-29063990-3	12.0675584297171	0	1.35076026717958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121423641-3	13.6434222947054	0	1.35381567670013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3501821-8	91.8953666171265	-0.282322296222892	0.247130860900328	-1.14240000295535	0.253287790049071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29601764375311	5.96674136650451
Merged-chr10-21622274-2	5.96280631205299	0	1.35552284244267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10476746-4	14.0587559184864	0	1.34354770218882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70992909-4	8.88486418514314	0	1.37355497226374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80490781-4	9.69438281647692	0	1.34884803901796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99493470-4	25.8634937091615	0	1.34034851183833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87984647-4	14.0123993311218	0	1.34042780245772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36814755-4	9.28049494439574	0	1.35209983217375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61024919-4	12.4629693743456	0	1.34404806100162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173961681-7	105.467876880512	-1.95787466688017	0.223014999942358	-8.77911650510603	1.64763786781889e-18	3.44476718679874e-15	C57BL6J_F1_Control-BALBCJ_F1_Control	7.9916042248779	6.01161411200229
Merged-chr14-20765894-5	27.8228311238538	0	1.34072126473114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144123633-3	11.2144672283271	0	1.35565565259882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78995330-4	12.1237678397106	0	1.34862495892958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98892339-4	8.0348310449726	0	1.35613239121519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145200259-4	23.2002347736242	0	1.34084787474526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38400057-1	3.68973143768794	0	1.41802283371209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110466405-1	3.40425276768757	0	1.43871619033584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80830668-8	117.108430496931	-0.55932240946282	0.28974441875242	-1.93039925280061	0.0535573874519562	0.618435705416557	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54957744456434	4.95502387649982
Merged-chr10-67748781-3	9.04122987420219	0	1.35490907570363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4987415-1	4.40509456078158	0	1.41257569136177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65102193-4	11.6955595360307	0	1.34318794618208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5602186-4	23.0018674699938	0	1.35562660452463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112396738-4	11.4284443030281	0	1.35256233246163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62015876-2	6.02178764001357	0	1.37387949680384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50157196-2	6.50560367672269	0	1.38722073489887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57396455-4	12.1143680302092	0	1.36115351315456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-113868048-6	42.2208296022505	-5.0190417626802	0.646501091848691	-7.76339255410704	8.26871759870741e-15	8.64383115284877e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30352882716368	1.18909650862134
Merged-chr14-65890806-3	14.3210046516858	0	1.35235706943733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113857714-2	10.1664640144283	0	1.38225879414761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67311699-4	12.5571064099986	0	1.34338983972768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73746722-4	11.0983404737595	0	1.35948055484165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61087148-4	17.7344836604163	0	1.34209930638954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80938844-4	13.3893950626778	0	1.34112243118812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-37926171-7	26.9408826521343	0	1.33536616745792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55419134-8	38.1454015579518	-0.0814716121484702	0.284601404812056	-0.286265671113859	0.774674648868275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52151164555899	5.40987931184055
Merged-chr9-71805842-4	16.2050488778552	0	1.35214903997868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51689696-8	54.8616958139686	-0.194770313496497	0.312077785502014	-0.624108227322833	0.532556511129033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29659796818466	6.06814988711473
Merged-chr2-73548768-3	10.0652954257638	0	1.35887605514327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107594150-3	13.0467331784803	0	1.35674581775852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65201493-4	22.1043783247012	-0.762221704211052	0.751002121338261	-1.01493948226511	0.310134676158429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00129118555875	1.56608458088645
Merged-chr16-91789913-4	8.73610879136345	0	1.36287631066184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68438100-4	11.0136432455884	0	1.34744405832984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138531727-4	10.5380873196353	0	1.34976029668923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48645230-4	12.966469960184	0	1.36673238741791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3481848-4	11.7769507932081	0	1.34681892023377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151265001-3	5.58790651246568	0	1.37310501448421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116607287-4	10.6199833119668	0	1.34637539051607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73472721-2	2.69771509066214	0	1.44474132180975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19541111-2	2.54847297217147	0	1.52819990656092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29517341-4	12.2870865562182	0	1.34057167737941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129063307-2	6.44049936919093	0	1.36819985340467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134268252-6	74.6985290701365	-1.62294883149962	0.292123441049789	-5.55569531040478	2.76508837566878e-08	5.6506556019917e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	7.34763569442379	5.73107339636439
Merged-chr4-129031629-4	9.48492811283924	0	1.35010658789044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93756043-5	27.1352445970566	-4.47917094772876	0.789340145872293	-5.67457638022309	1.39032273621418e-08	3.05977949869904e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04848903595792	0.879366456215217
Merged-chr2-118490805-7	30.2996495299625	1.42074679675894	0.40528673931352	3.50553486937525	0.000455690806480018	0.0200899404293977	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46941575194059	4.66859140580755
Merged-chr10-93950114-8	83.6487646286504	0.985825986694922	0.234884759362874	4.19706237803159	2.70399476009173e-05	0.00199438875391895	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18613066123723	7.19094084773365
Merged-chrX-144338592-4	12.3199924739264	0	1.35768110101579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94507272-4	13.7639774078991	0	1.34721183513792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59205282-4	13.5402820300033	0	1.34386603793657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117405665-4	11.2654335005333	0	1.34558206896746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80988252-4	11.0072835544768	0	1.35036094428209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80702657-8	58.0888130211237	-0.593009610722782	0.272448325745525	-2.17659480600615	0.0295108130535899	0.418946781962249	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10501072190845	5.4067040336376
Merged-chr6-93758279-8	80.0410773345107	-0.583977453314022	0.2054166612452	-2.8428923426856	0.00447061686211032	0.113400962205999	C57BL6J_F1_Control-BALBCJ_F1_Control	6.91201191565227	6.3279489064659
Merged-chr8-35666000-6	66.3249787819009	-1.8443008050917	0.257942430794045	-7.15004816933081	8.6747454836597e-13	5.61369630650306e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.97848041695613	5.13760375444086
Merged-chr12-98265221-3	7.41406684773763	0	1.3787027578974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107277171-1	3.06436164000631	0	1.4859011265414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120296295-4	17.8249187112584	0	1.34680556333103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73459385-1	4.22766207126201	0	1.42484009170131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3659082-4	9.11753015237378	0	1.35554867014178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22484984-6	29.4043735812302	0	1.33718199904805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68985471-4	10.5358082345622	0	1.34786182139894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82354451-11	57.2754578432149	-0.0641102966255874	0.219191530487674	-0.292485282086173	0.769915611342009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96113377890121	5.89986454163058
Merged-chr1-61141109-4	15.4272343404216	0.215274773151086	0.646753075708145	0.332854656957568	0.739243998046083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30712077184164	3.01788632613492
Merged-chrX-102032017-4	12.0204176474002	0	1.35364831691493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87805904-6	33.2263639359832	0.203629062633951	0.489567638260259	0.415936525865093	0.677456450887803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49959394815356	3.63910271535255
Merged-chr17-46857698-4	15.3023683973557	0	1.34803303037484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12591545-4	13.0879190589698	0	1.34471719353592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22856646-4	26.6581677154843	4.02037743668754	0.519112715947742	7.74470998913512	9.58002498996505e-15	9.82567129112284e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1439715376394	6.31012522510718
Merged-chr1-138127007-4	16.6661882981958	0	1.34308878466506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99327588-4	8.07405544502378	0	1.37348937149844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65662869-4	15.1437415689755	0	1.34608634523992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112991380-4	12.4083692611637	0	1.36013601770639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78440158-4	15.0729605741848	0	1.34335711528238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101592519-4	9.97275251202875	0	1.34880925907312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66088641-12	74.9214713056088	0.263907323534521	0.33892283544162	0.778664922918654	0.436177124051408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95131288910843	5.52025316814002
Merged-chr8-36164387-4	10.7918223689529	-1.29595096999896	1.32932487814207	-0.974894091962114	0.329612797025939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr4-97751971-5	36.0730267264967	0	1.33905448722482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173491610-1	5.83144860777529	-0.913638640110061	1.27529809191429	-0.716411830224447	0.473737092217008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0.465515277017237
Merged-chr13-60673034-8	136.091951937038	-0.152532471233279	0.29833360333281	-0.511281563757065	0.609153912638681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80584506778418	5.67136757160919
Merged-chr5-3493262-4	16.738703214545	0	1.35204885767926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120172225-4	13.7835203540415	0	1.34415692502814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21646242-4	13.9506101200528	0	1.34209556272717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20028798-4	15.5983786889126	0	1.34191476539326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135402502-4	11.4086093639893	0	1.34163612916658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83602167-4	9.04599425276848	0	1.34825759425619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56285055-4	14.6937780015187	0	1.35247763870793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88284675-4	10.318238732975	0	1.34626754797117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144698210-4	14.3944093046886	0	1.3549107400784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79562004-4	14.5788876994992	0	1.33962804303186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23867552-4	15.6946809051394	0	1.35248164185637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120310981-4	10.5610247279095	0	1.34807297887613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-51930148-4	13.1629458996318	0	1.36554395650343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27827181-8	46.8928529795646	0.226133117766649	0.357734236177564	0.632126016740557	0.527304536024335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10071971505225	5.30443952002327
Merged-chr18-73749580-3	7.58038242072174	0	1.37233360468494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34682897-5	32.1947648533965	0.0718614406395457	0.566404293816272	0.126873050617896	0.899040876735479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04983561184268	2.91577036123833
Merged-chr11-4260667-4	18.7105754571338	0	1.36472736711148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88551717-8	49.2816852516464	-0.109974401905692	0.262901396424808	-0.418310451755799	0.675720148947984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78831448678779	5.67475947034072
Merged-chr11-105460088-4	11.2798953565751	0	1.35128055975211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48325952-4	13.7640620199735	0	1.34753417908136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126882489-4	11.9809042442884	0	1.3628838457133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63616992-4	19.8219923266535	0	1.35777857888303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135633621-4	17.7383574636997	0	1.34415814540826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132117982-1	2.3500284263591	0	1.5317822757912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20733396-1	2.18408871979539	1.13186785137948	1.42772303495661	0.792778307603532	0.427906997107745	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.67591700901439
Merged-chr19-43631051-4	11.050023871152	0	1.34475208223914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95772492-4	13.6452990578533	0	1.34421050238124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96715225-4	10.4915979244267	0	1.3661734719449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86724148-4	15.9494504134888	0	1.3425179339484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72863307-3	5.98580208110471	-1.35552694012684	1.41158342694962	-0.960288222606923	0.336910175826296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr17-32193168-3	6.28165612051355	0	1.36587559049713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22729147-1	2.03701472168084	0	1.44687481337635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74218253-1	2.50627231991457	0	1.51276212992451	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-33212024-4	11.3921999987921	0	1.34420003688687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108558144-2	5.07355108975703	0	1.37300480811148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22115942-1	2.21689701903532	0	1.57201256801831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121372078-1	2.30224788570482	0	1.47097954405376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15727778-4	13.0486383886455	0	1.34534855658942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25403974-4	17.7260405693929	0	1.33851356209125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65737290-4	9.76744464281512	0	1.34214636669659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25519929-2	4.94835873946371	0	1.36524950696768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64141830-1	13.1015073219532	0	1.34339482147826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99170545-2	3.41262734432255	0	1.43862458237819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135628190-4	7.70528710449596	0	1.34903519307826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38485201-3	9.58466983176714	0	1.36568331523525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95181110-1	2.251520633294	0	1.50598580558741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120872571-1	6.76543309215942	-0.111118220005153	0.599690767404008	-0.185292530825797	0.8529995961319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24997699552959	3.12661511686363
Merged-chr1-36072099-4	18.5943733985442	0	1.35316921058313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51183694-8	60.2881670590827	0.685169819261722	0.271712438815107	2.52167262658138	0.0116798351108418	0.223636546949718	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00380170641241	6.71154242300818
Merged-chr5-115260508-4	10.0770459312952	-2.48478410420933	1.19043183548283	-2.08729641643154	0.0368613485249951	0.482249348849629	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0
Merged-chr11-76628803-4	15.5097824175345	0	1.34768176835741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78528072-4	10.5406974765543	0	1.34545091032063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55529078-4	22.6174556335521	0	1.35423306907907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33835409-4	12.4041997028807	0	1.35632040053139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51708784-4	9.99065053354987	0	1.34633676933744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-25081767-4	20.3630760031151	0	1.34591192955305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106148374-4	17.5911017673528	0	1.34424668713002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34531841-4	15.4305440391645	0	1.34525292922741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114699165-8	90.7822054073468	0.0670115456846924	0.222385126228913	0.30133105941498	0.763162058923406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.63745593019718	6.72370614386085
Merged-chr4-6227219-7	37.7268379362148	2.65990452749173	0.319176943993692	8.3336361775063	7.83965863071071e-17	1.12146316712317e-13	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00929850205299	6.60189823765984
Merged-chr13-115209595-4	9.65537956362007	0	1.34582285871494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85992644-4	18.3639189603042	0	1.34872305083335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46120116-4	18.7292226566419	0	1.3503464122259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31077678-4	16.0057361194206	0	1.34221215618765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43185689-8	54.2342757234579	0.076939398035842	0.298711234243112	0.257571156407273	0.796737892604448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14914098305959	5.21684226974214
Merged-chr10-93945572-7	40.0390435387251	1.15009607537338	0.327849602372334	3.5079989942072	0.000451490756881905	0.0199533219945882	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88593050669671	6.04360907528698
Merged-chr1-55807128-4	8.95933062763305	0	1.35400336758525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119360462-2	6.35153690800255	0	1.35534746029495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51288064-4	8.44072714939953	0	1.35686627796139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-138392872-4	10.0852621034821	0	1.36223228745667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68468201-6	40.6451558902165	0	1.35747279945217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37073435-1	4.40256721345752	0	1.40976697862976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27925838-6	26.145155852916	0.477424864326002	0.791034823950828	0.603544685860353	0.546146397722811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.41391928460556
Merged-chr10-44729620-4	17.4979432924143	0	1.36215025498442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42887609-4	15.3304197685886	0.367089889073051	0.701302028270047	0.523440506765079	0.600667741915114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1199222003366	1.55809314683451
Merged-chr9-110645389-4	10.862801078225	0	1.34869303010507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36467800-4	20.9204229411	0	1.34319733737606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97142427-4	19.9185512852304	0	1.34773381500879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32698963-4	19.6441996869743	0	1.34517273851352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-10280387-4	11.2761188792969	0	1.33910173171539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6567987-4	13.2825531978935	0	1.34463802796949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3537873-4	14.1362090554855	-1.79876045496677	1.15424859361324	-1.5583821933332	0.11914267518249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.376242425970964
Merged-chr6-145348359-8	40.6724389611572	-0.283753732575366	0.328542518122685	-0.863674309787224	0.387766830094902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48137978061836	5.17374954684925
Merged-chr19-21913937-4	14.2926365313348	-0.0340513432960097	1.27820577652273	-0.0266399541618753	0.978746905744815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr15-68401666-4	27.7907805834123	0.345378584524233	0.857891783382375	0.402589920097524	0.687249926189968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46261730325446	1.16492870185157
Merged-chr10-24641949-4	14.8508978404387	0	1.4085229022156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29673032-4	13.2831461705469	0	1.34888291844857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180695366-6	35.233449971091	-0.782387195394869	0.409672188860839	-1.9097884031875	0.0561604630425943	0.638800295152204	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09829006238487	2.75258859297605
Merged-chr19-44388588-8	76.5182429871443	0.17268120951908	0.240191547239304	0.718931250927979	0.472183280173407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.44019787889105	6.60804170387144
Merged-chr2-152805040-4	12.7735909916919	0	1.35607862812817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67821445-4	11.5976175547184	0	1.3452506898677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22354251-6	53.0318781573185	0	1.34405221879413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36296644-4	9.5571318177093	0	1.35220130688681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56334505-4	14.2750347841849	0	1.34785395071085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64609134-4	11.013296274765	0	1.34971286471078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4510042-4	9.40735846584679	0	1.36380814769971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79370842-4	15.8834794401037	0	1.33926778708001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108268028-4	8.00185150472356	0	1.35062460619037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102316403-3	8.386412332716	0	1.37387911593173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-123267087-4	9.5204587482703	0	1.34216801243849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94381090-2	7.80354211873969	0	1.39566277648572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3170130-2	5.45882488576492	0	1.37514859753046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45552380-4	9.61447453758636	0	1.35796191705697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66179154-4	11.1530772005763	0	1.35500933658862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109776289-4	12.8187724143089	0	1.33952844469242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133814598-5	30.6308908654791	0.240952778350164	0.323163603235006	0.745606175751613	0.455905351164214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45321598165703	5.63986759711183
Merged-chr10-44665880-5	20.0920450502864	0	1.35091113724125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96912980-8	44.2020006294931	-0.735777260830752	0.250842502845158	-2.93322404490972	0.00335461719002529	0.0928953824924017	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10157330930184	5.28310885639504
Merged-chr9-21901643-4	7.60685383332298	0	1.3535331911586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34034962-4	12.8748375394362	0	1.36811979845562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33050543-4	12.2742694828213	-3.0094055291996	1.15151037206674	-2.61344196474609	0.00896353055070619	0.186685270960091	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	0
Merged-chr8-20550189-4	22.9930135995572	0	1.3763496535788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122922297-4	12.4419157073346	0	1.35258248413621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43343358-4	11.4129325086305	0	1.35288463079217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45282677-4	13.1974454669878	0	1.35063935161817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77931084-8	43.2196044993452	-0.51375573351825	0.280942926730515	-1.82868363869169	0.067447014889357	0.716784414930705	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62257448510507	5.20217963597941
Merged-chr13-113359074-4	10.7809028954202	0	1.34713933834713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73039518-4	13.8913034665303	0	1.35535552749834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80030689-10	96.1372189524081	-0.505975537965521	0.181015633479854	-2.79520353153273	0.00518670497540821	0.126887531844381	C57BL6J_F1_Control-BALBCJ_F1_Control	6.7779618447595	6.35932091362187
Merged-chr17-24654183-8	39.3213616519984	0.257510530986934	0.247272758340094	1.04140275182582	0.297688665926815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54825807215687	5.86925626068988
Merged-chr10-21777328-4	23.2136165713808	0	1.33968676759827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47752001-1	5.06046473124124	2.13326476823215	1.08696442293836	1.96258932050908	0.0496939126355261	0.587369297011212	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	2.70374281082078
Merged-chr10-44604954-4	16.2455644750997	0	1.33925580601402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62761369-4	10.7416928467465	0	1.35223379783744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60736645-2	7.25274547924689	0	1.36032891005251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54749505-4	12.6610221234907	0.39498017336041	0.733731742561303	0.538316867662857	0.590358308197393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	2.086211388454
Merged-chr8-10139747-4	9.08226129518282	0	1.3559000554349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98087746-4	11.233292966077	0	1.34673880824333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141998820-2	6.26259360587381	0	1.36079533140143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101905856-2	2.58150354968144	0	1.5006137869871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191248646-8	57.5793830947231	0.299994516670851	0.215545686422638	1.3917908618344	0.163985737972626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.08985200456933	6.42915972154175
Merged-chr15-58746334-4	13.6705257874883	0	1.35305994377745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44973613-4	9.16227776824915	0	1.3463007005838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108504955-2	10.8248869251066	0	1.39005383534428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21808397-2	2.62533452793716	0	1.48605779846232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97782032-4	9.31540131852893	0	1.34900942125991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17264929-10	106.284887104214	0.340676484775486	0.201335967275042	1.69207960895577	0.0906307957936251	0.855346134740814	C57BL6J_F1_Control-BALBCJ_F1_Control	6.43332797435733	6.76710957289545
Merged-chr3-152114992-3	9.9083091431701	0	1.39258021140987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90528355-8	54.9675141082275	-0.121342357783202	0.339868264717615	-0.357027620345846	0.721071128529932	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41405211273116	5.23595479261782
Merged-chr4-9243673-4	13.9119273037116	0	1.36750831224666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105164242-4	19.5931726599471	0	1.34491084410633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38974035-4	21.6151391115653	0	1.34994781623794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5769874-4	13.8106539755729	0	1.35111859874488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95950855-4	12.7867093023114	2.0602303198201	1.11031224475155	1.85554138446984	0.0635189551928231	0.690703517768888	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.36465105606579
Merged-chr12-102380329-4	11.6051163011097	0	1.33915159395312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94363517-4	13.5906029815685	0	1.34713260129212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113662057-4	9.51353845202918	0	1.35699773234095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101329317-4	20.3553507569226	0	1.34462360105233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26612697-2	6.54313749184862	0	1.36123109465112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34600104-2	8.08952858831835	1.27722910113553	1.3666569183408	0.934564545055063	0.350012757970882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr11-95827646-4	6.46135230031598	0	1.34987574071639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54904339-2	7.32661215228824	0	1.39432306977619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6452403-4	8.3071273830826	0	1.34972489014389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120172449-3	14.4208536456451	0	1.35317463969097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34938616-6	24.374481167194	0	1.34854745175084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53512684-4	18.9314331131285	0	1.34023665414774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21030414-4	16.2272426353909	0	1.33810966155371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25606725-4	15.4251586605099	0	1.34787180699301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52619708-4	10.208818030848	0	1.34432544402245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106563760-4	13.039828547253	0	1.35149215492533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11180081-1	4.52937648394419	0	1.37979026819002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3649171-8	47.6102358389934	-0.522557407243773	0.29970554803505	-1.74356934888192	0.0812342119129386	0.801589923988448	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62359148741995	5.09121129764434
Merged-chr12-85490556-4	11.2963345005577	0	1.35338623206117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-14628780-4	8.28787945358312	0	1.3462529090133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35123470-8	60.0362157593241	0.850307126641846	0.307353778957879	2.76654196192062	0.0056654293177079	0.135310664446961	C57BL6J_F1_Control-BALBCJ_F1_Control	4.768214528362	5.7121370670461
Merged-chr15-38278281-4	19.1383653200428	0	1.34516790882505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69419963-4	13.0180133912521	0	1.34751062574446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51571401-4	7.06416624434694	0	1.35176670957842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79642062-4	11.3551052586016	0	1.34475111793637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21940447-8	49.7543541660635	0.385544039407057	0.294442184788222	1.30940489958788	0.190397232685366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07319404336523	5.43962193344177
Merged-chr5-27195202-3	11.5847563753848	-0.0358857410123838	0.918932807048988	-0.0390515397177138	0.968849297173255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	1.40298672487694
Merged-chr11-21015164-4	20.2748258904191	0	1.35704207723198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33691502-4	10.5029869652564	0	1.34589857837863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140614065-4	24.2504179677096	0	1.44734707400971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5116467-4	12.4007193737982	0	1.34319199882647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-71104136-4	39.386394037118	-1.65421332045354	0.695387783054496	-2.37883575289086	0.0173674125147128	0.292837917041288	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24095438322535	1.62830504494315
Merged-chr7-74645734-4	14.4281955044856	0	1.35232060239294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52100160-4	24.5773231531435	0	1.33882648751899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130089839-6	42.8302149745843	-0.666399153038214	0.658770207863627	-1.01158058619458	0.311738632163765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43049365066179	1.47418322843784
Merged-chr14-79290801-8	39.3538736001418	0.430798888701187	0.386446678277826	1.11476928879558	0.264949300193511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80667869667468	4.09427323264449
Merged-chr9-99180538-7	36.8514689600374	-1.09483882069085	0.400096959649132	-2.73643374258824	0.00621091010536621	0.143323371454419	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49739329772685	2.86896085838424
Merged-chr6-72522510-4	13.6130319579171	0	1.35575704303862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126661193-8	82.8841610893795	-0.788454675569299	0.271331322870644	-2.90587414393432	0.00366228721245917	0.0987694657368698	C57BL6J_F1_Control-BALBCJ_F1_Control	6.21431897546897	5.27907435038178
Merged-chr8-117054304-3	7.61040902762953	0	1.35538076413448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67563372-4	23.9020883847908	0	1.35996298305463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135947625-4	26.9648739038277	2.67799377118029	0.525806401618738	5.09311747239263	3.52223305061273e-07	5.11938680209244e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69735600200997	4.82005030368695
Merged-chr6-129402622-4	11.3328267429352	0	1.35322480397041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71382133-4	8.75766308798387	0	1.35524490139337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67461008-4	10.5657447170089	0	1.35000701381635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116162383-4	19.8619635764022	0	1.34540855173907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89580146-4	9.4645496972069	0	1.34701505401456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66210089-4	8.02306252096373	0	1.35059297014328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180793677-4	20.9191101576398	0	1.34803388948431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38348773-4	11.1721095685412	0	1.35092066343598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34501029-4	14.6645220246869	0	1.37068092896764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34234035-11	152.753729698966	0.0978794042310067	0.179137176186844	0.546393586828209	0.584795417522384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.7380488297532	7.81243043559524
Merged-chr11-3382790-4	15.6299772165305	0	1.37722375364008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22656804-2	7.27729380779419	0	1.36259769580161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59680836-5	21.1234482856293	0	1.33711774358686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27385010-1	2.10843635196963	0	1.48319945199308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137825532-4	21.8443747959845	0	1.34104162151252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53721567-2	2.74413196340696	0	1.71325292544913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104367938-4	22.4461118975534	0	1.34019303713123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50650390-2	4.12752848817579	0	1.40397661697097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21796548-2	5.81438728338595	0	1.39854551018307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15989047-1	2.94669163461672	0	1.4319555405355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152806734-3	7.79660567972849	0	1.36007299666745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46483133-4	16.3597556843758	0	1.34058234869521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118705019-1	8.43712634815273	-0.379045651070076	0.530733627531329	-0.714191887243288	0.475108532767229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28525990207753	4.1215042210273
Merged-chr9-110997423-4	12.258456167954	0	1.35114478456724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80047000-2	2.62149189092811	0	2.34744781029578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72735372-4	13.5288446197856	0	1.3545091867316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80315020-4	15.1026530817858	0	1.35088607820357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103604395-4	12.623250316538	0	1.35052996941653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-63771365-2	11.8677197552163	1.0289844168473	0.596126310018018	1.7261181054334	0.0843261672115506	0.81898983802978	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11480110409737	3.48424833019579
Merged-chr1-52799759-12	75.0163993385032	0.406730990904118	0.268824091785897	1.5130005209059	0.130279526539872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94765251085556	5.33024617777133
Merged-chr5-146819775-7	44.5314270687147	-0.376614074999625	0.259820304556476	-1.44951748725921	0.147193120344515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63331805403119	5.22717776376358
Merged-chr4-62662247-4	12.7219229786719	0	1.34461314436189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75778325-4	11.7988717029324	0	1.34330533579885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48924975-4	10.3381842197082	0	1.36021874868901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5208047-4	13.1643087231974	0	1.34744472752333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124071693-4	11.364727841684	0	1.35890828351477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129315993-4	17.332893116408	0	1.34692801961467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58876173-8	36.071143036589	0	1.33889681344621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69036015-4	9.93914069645896	0	1.357454995153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119063226-3	17.0232490307143	0	1.34332809085893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31559071-4	9.14916960760783	0	1.34970069581801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20018257-4	10.7368986391428	0	1.34546597702082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35520604-2	4.68680371776188	0.615042220870547	1.46230210904968	0.420598600702456	0.674048215703595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr7-88128655-4	11.6410980513621	0	1.37159655851817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165617357-4	14.6148348873713	0	1.35982337245795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46553958-3	12.2521862138127	0.100486698459569	0.698703041095952	0.143818893792062	0.885643482892412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62319166842064	2.78597213134036
Merged-chr12-73304833-4	15.1853911877282	0	1.3535791809014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62001746-4	23.1918030462309	0	1.34455222359168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128020578-4	11.1955783175582	0	1.35017210997122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45033739-4	25.8219285680192	0	1.35521290328191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98867994-6	22.7386395312536	-0.177447946940657	0.447295510785114	-0.396713006641163	0.691579107688298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53873698183212	3.54563688904172
Merged-chr13-95844760-3	20.482989098396	1.61214012396966	0.488386409146864	3.30095206127012	0.000963573450053931	0.0348032486189247	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59485125810271	5.02314950486996
Merged-chr2-3519982-3	11.693750666003	0	1.34307877251242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107584131-6	38.9592667864072	0	1.33638482122793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154933125-10	80.7731494337371	-0.263815009416502	0.29065378874174	-0.907660658952962	0.364057535273748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77982697109957	5.61333358980077
Merged-chr4-86580200-8	54.2005246576608	0.202394264732203	0.26373515841505	0.76741480335241	0.442834929825592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.56715476642764	5.60946289552891
Merged-chr9-106908916-6	37.8697849229855	1.89103544131637	0.428892664684028	4.40911117635815	1.03795733507233e-05	0.0009129825692103	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90265069314093	6.03148609375736
Merged-chr11-18970051-4	14.5122279124727	0	1.35573192750343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77238783-4	13.5643793841154	0	1.35838703354546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27215917-2	5.57605445769453	0	1.3662549597706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122146014-4	13.2348115258415	0	1.34604659595446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84685839-2	7.87724801953341	0	1.35785416863759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116003684-4	18.9696177292327	0	1.33955246125397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-177206497-4	17.241209290505	0	1.36487653530819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161528353-4	10.3673506180877	0	1.35772742934744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59743077-4	19.4897437957471	0	1.34803707152984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103662319-4	13.8028897091755	-0.917098049956625	0.834521985295919	-1.09895013686359	0.271789815981432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.3492022585148	1.14143228603163
Merged-chr5-122637119-2	6.53588676475613	-2.10586401626379	1.14463796823696	-1.83976425271597	0.065802855739158	0.705796652550294	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80756150444367	0.303163067301871
Merged-chr13-53219643-8	32.795765051027	-0.178305409446351	0.424107969036615	-0.420424567478375	0.674175324053821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65125081181642	4.18386539688762
Merged-chr1-161560562-3	8.62672782507344	0	1.35026630782016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31123578-3	11.6674478041094	0	1.35179918791385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91083034-8	56.102014325023	0.126893576590147	0.277018372820185	0.458069171724271	0.646902746334801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09911593283376	5.22477092356621
Merged-chr3-27863505-4	16.9597022550385	0	1.35851696390629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36792083-4	10.8411416643825	0	1.34423732423111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29484892-4	10.2076689285055	0	1.35386901557675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33352544-4	10.8966016653957	0	1.34157951401487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31380449-4	8.71981867658011	0	1.3571521302742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-5357039-3	11.8381764915532	0	1.38234930261967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128694664-4	12.3055036936509	0	1.34514537898955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122924042-4	12.1358323687968	0	1.34249888239582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70713666-4	11.0817129652457	0	1.34475682002938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35644698-1	3.50525596213407	0	1.46725463710763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75701948-4	8.76722755294501	0	1.35017510820878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104118065-4	10.6702545687451	0	1.36204648166325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121506832-8	46.5391694969337	-0.0367673785869959	0.313692035653763	-0.117208517935017	0.906694817111153	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23826420153957	5.2002916786187
Merged-chr6-34874675-2	6.1592398647808	0	1.39591715704666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45454969-8	51.3050424351559	-1.8622509206377	0.751452798634107	-2.47820079188294	0.0132046811003177	0.244530023437625	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04997081279711	1.0754104773304
Merged-chrX-38461078-4	11.5208021599935	0	1.3421774283916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125294215-4	12.7532740741149	0	1.34440559102551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118554564-4	8.28222217975922	1.27171212282084	1.34946139441174	0.942384960464323	0.345995584304969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr12-91764487-4	16.3244732101776	0	1.34997195711591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111821352-4	22.743659238304	0	1.34210476564078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83144691-12	100.179071528606	-1.25267729361431	0.199480044707573	-6.27971231634054	3.39200087513264e-10	1.04764645210986e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	7.56471232419169	6.31440204095521
Merged-chr16-93812475-3	15.6889004758759	0	1.34619741308096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87299172-3	7.95923188774144	0	1.36721150330688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122576683-9	77.417368898901	-0.0176899174192119	0.250178882799078	-0.0707090751277313	0.943629298011254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.44004261924787	6.37748229765481
Merged-chr1-180432055-4	10.3767725698215	0	1.34276809270017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119977129-4	11.8412734676508	0	1.34374856161471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69418218-8	73.2803343078596	-0.157725925854048	0.278984469997945	-0.565357368656435	0.571830715179456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.25439392089262	6.08435861280182
Merged-chr2-156857488-4	12.5865931700446	0	1.34431102658695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117832383-6	29.3327909370931	0	1.33884038639563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91371013-4	19.3676644964448	0	1.3405200923944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128796669-4	14.531222778368	0	1.3409642842458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57947753-2	9.11871652995912	0	1.34723945860735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37231061-2	2.66079062986465	0	1.66073578905513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146671597-8	65.2768259548794	-1.325174721632	0.221584939070265	-5.98043678957703	2.22540071931068e-09	5.87235716995192e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56821709398267	5.25483316991177
Merged-chr2-167744167-4	24.4224570830927	0	1.36953425516305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142098541-4	10.951925938068	1.4691950272965	0.713104226635772	2.06028091325128	0.0393716935198912	0.501745985259006	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	3.16649519084711
Merged-chr7-64341914-2	5.4492714991732	0	1.43061543551791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111156623-1	4.43984800932128	0	1.38583521751593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17878625-4	19.6195504891867	0	1.35026827092461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68443534-4	18.365659666388	0	1.35940489800683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38769764-3	13.1494712270443	0	1.34498558392858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40994094-8	97.2707918086936	-0.741407457853764	0.336484598400275	-2.2033919572503	0.0275671345783163	0.400674296401791	C57BL6J_F1_Control-BALBCJ_F1_Control	5.88310952728394	5.12903200778922
Merged-chr16-92801068-4	12.2459877476054	0	1.35016885803635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124704396-4	11.6013018168785	0	1.34292052772731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56884966-4	12.2611987551789	0	1.35613542472125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174041718-4	9.42374829907001	0	1.37253205040141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41369967-4	13.8848090559215	0	1.34146668566703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80009001-4	13.9456155445322	0	1.34741130476006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54642603-4	14.5816162171584	-4.66745295920962	0.969774156421737	-4.81292776086294	1.48735064111059e-06	0.000177304591009058	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45955806537768	0.601513806634888
Merged-chr17-35209953-4	11.3777193744268	0	1.34561273672455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120665936-4	9.89817984748216	0	1.35900017702307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96311683-4	9.96279458558545	0	1.36804375913062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45371795-8	45.7758980839894	0.0272674863568692	0.27726833972076	0.0983433102543572	0.921659688228489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28158625767522	5.38147557518415
Merged-chr17-17454863-4	16.4513531744938	0	1.35194749887754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8629397-4	8.3286692744735	0	1.35431656605387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76623482-4	21.3734443344469	0	1.33949256357921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66134364-4	8.14402287674762	0	1.35217863602887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97676389-4	15.2670691988949	0	1.34423155769896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92440404-4	17.5179066668647	0	1.33944655512416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55761233-4	17.8374771723385	0	1.38634821727079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166710088-4	17.7833370205406	0	1.34242485917585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7226782-4	20.8503813142424	0	1.34124532441085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113949888-4	39.3657123215059	0	1.36590219867545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54446211-3	14.5026817381732	-0.473001415827694	0.591299331980954	-0.799935650600277	0.423748081081488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82432570933726	3.3681657229973
Merged-chr3-21633999-4	13.3741060575945	0	1.35568215043944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101781490-12	105.93342647004	0.239591596211742	0.227719688908243	1.05213386405197	0.292738137279058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.86411853760201	6.22137057757493
Merged-chr13-55432528-4	10.8970182404311	0	1.35060410495966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96562761-4	13.2845366876288	0	1.34301520498611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91178830-4	10.5191344978969	0	1.36023251546927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104742463-4	14.3088522145645	0	1.33827398912087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121371622-4	8.2811796814692	0	1.36140289214326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-18339327-4	9.97102733243945	0	1.35049546494584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75047936-4	41.197467295441	0	1.36060906899939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60268723-2	4.64276693427097	0	1.37293459424349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118259976-4	13.5679696496344	0	1.34629327227435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4080732-4	13.6455921387115	0	1.34469551353523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30587405-4	11.9008327720651	0	1.35258014177316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32705285-4	11.2660759229256	-0.118318857188528	1.14426324529724	-0.10340178073079	0.917644098905153	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.577068348605183
Merged-chr15-97174814-3	8.59759236251111	0	1.35598294041791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12728997-3	12.9044814657477	0	1.36060959891568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30152283-4	11.1153460212986	0	1.35993141839692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129230442-4	20.3558328965408	0	1.3693361969962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31176552-4	13.0461282142311	0	1.34351836514777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91272972-4	16.5439331017431	0	1.34623412451776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92491013-4	15.2288656839769	0	1.34873042718128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3420306-4	14.2363028051514	0	1.34229481250171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94955283-4	9.1370951015253	0	1.35335216436883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167007028-4	26.1856602266507	0	1.3429783285578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85367080-2	5.36552893031292	0	1.39741271682794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3025531-4	14.9443182835157	0	1.36420930450195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143146949-4	10.233897533282	0	1.35360010925089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111047457-3	8.06463606143991	0	1.35328422099677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43352021-3	14.8558662188775	0	1.34929144246599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150377474-2	5.2509058786571	0	1.37025253890291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128622670-4	11.2418111861238	0.346669314928133	1.0505240326264	0.329996558062009	0.741402562853173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.990331813111976
Merged-chr3-122964505-4	9.86345735163146	0	1.34528732677862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10476090-4	11.2137563830929	0	1.34894317387392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27725208-4	17.336502924802	0	1.34191864937259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-98881266-4	10.6188619859932	0	1.34912231034135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130816114-4	9.60923652084522	0	1.34806419348026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60978104-4	14.9637118765077	0	1.34530922387944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3357010-4	14.7701579970038	0	1.35944843182487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108958139-4	10.0692571436351	0	1.35023752463568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152788960-4	14.2792010397001	0	1.35258963249242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119486814-1	4.64372252919756	1.26183966195658	1.0137959905	1.24466823086787	0.213253728394245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	2.19069586525023
Merged-chr11-44415481-6	40.4275780036595	-0.18466908865269	0.267559171603887	-0.69019905969094	0.490069014609015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18031742018008	5.83826119786432
Merged-chr10-13832961-11	301.464034408996	0.195624646671641	0.13333399938337	1.467177520935	0.14232777027384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.10337333392287	8.29094002204916
Merged-chr15-79720989-1	2.72099583810391	0	1.44453217441406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91776521-4	15.1862835892275	0	1.3463174022977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103759780-2	2.58037723986689	0	1.59659582280012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88509364-8	95.5832353409981	-0.54155928092318	0.269949666568491	-2.00614910107984	0.0448403424878662	0.548486988590891	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59717270616815	5.07815546955269
Merged-chr4-130821118-1	2.66752121744864	0	1.46379676659218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143593751-1	3.10274732719243	-2.8970995735907	1.30362839911761	-2.22233542591713	0.0262606457396065	0.388859286777245	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0
Merged-chr2-168578247-1	3.79059197206769	0	1.40409470028379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62940569-1	2.38719594298109	0	1.47423292882271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42449305-5	57.3522586733564	2.82980066179539	0.371019385698792	7.62709650997247	2.40099848722119e-14	2.212133504523e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93427423341103	6.92853033009689
Merged-chr3-136426765-6	43.1918689116371	-6.78974984183862	0.971891906683764	-6.98611624929179	2.82599943557534e-12	1.46303336493752e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65961957584592	0
Merged-chr8-81806961-4	11.2288961228826	0	1.34672208916269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144007520-4	9.76605856153407	0	1.34329156895052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79786880-4	8.45198519605755	0	1.36664286860908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51931384-4	9.76460286583884	0	1.35931832673176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163761603-8	59.3452971554813	-1.07285647557984	0.242118536339104	-4.43112077167535	9.37445635292241e-06	0.000840901110377078	C57BL6J_F1_Control-BALBCJ_F1_Control	7.04925424060535	5.96706177888097
Merged-chr2-6471922-4	17.2301617082173	0	1.33978005489416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12006248-2	7.355157684848	0	1.35980940063828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75823442-8	52.3972538729689	-0.245676033384991	0.271633424170568	-0.904439629015327	0.36576233271869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.93972877737523	5.62855109343083
Merged-chr6-146162784-4	15.3493466673229	0	1.34986742919393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58463180-4	13.8739037742667	0	1.34854464895499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21081284-4	11.208789695351	0	1.35968117222284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81307721-4	12.253684412553	0	1.34757606742958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3481929-8	54.3618261642354	0.069315559228369	0.239606160912113	0.289289553175528	0.772359806074274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.95887552117827	5.92101834961581
Merged-chr11-23855560-4	8.84370979953323	0	1.348107703201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92667027-4	12.1319152861546	0	1.34489121572577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16034005-3	12.1718169320764	3.54776799159908	1.07808823941786	3.29079556003207	0.000999044903533844	0.0358699352121507	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.13836773113792
Merged-chr19-55218618-5	31.618332076718	0	1.34234768805391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30190543-4	10.8846798580475	0	1.35244382201301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83166858-4	15.8602130588554	0	1.34226233942415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170155639-4	8.34141750909253	0	1.35486716291752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135898561-3	9.40917757106903	0	1.35337316588952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82260329-3	8.89493221424026	0	1.35524650977975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51853518-4	14.0033016843759	0	1.35524184833483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56566176-4	9.5990692478765	0	1.34802406542984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36129538-4	12.5242695536222	0	1.36816876839525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113875924-4	8.98124644434186	0	1.36149021451503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92419225-4	25.482304784156	0	1.34719019997455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84722287-2	6.98748094743876	0	1.36758533620608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157069648-4	14.226144287555	0	1.33710427250939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154094502-4	12.2689261922535	0	1.3412716575852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46792119-4	9.45583024902153	0	1.36776618428002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13717151-6	33.211561075151	0	1.34086624417242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12229784-4	19.7093122699671	-1.91148932285925	0.493546732644318	-3.87296520558024	0.000107519182423785	0.00623095441084704	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32170473756352	3.37623235772255
Merged-chr15-53104138-4	13.3989094903345	0	1.35828885012652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122650749-8	52.0076235822053	0.498543923130562	0.332052574214027	1.50140056679465	0.133251987391899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96122758000579	5.50641951676322
Merged-chr6-83598178-4	17.9585824754874	0	1.36051610883241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8574715-5	32.0381467897533	1.50603956310759	0.565839434891909	2.66160233847131	0.00777696959094656	0.16889664002967	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30868691370583	3.52277780314502
Merged-chr11-70489354-3	10.8086832084206	0	1.34976538546796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99165015-4	9.84272414877296	0	1.34765807053843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23332927-4	12.1725361670993	0	1.3443405338472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3183482-1	4.19104698245504	0	1.43671635103369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-112990936-4	12.9875587997817	0	1.35700320696126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50038533-8	41.2798004477477	-0.349392285369219	0.266638134645211	-1.31036127234434	0.190073648415286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51882248649629	5.16957032132355
Merged-chr5-114597884-4	11.7790470331722	0	1.35070329183279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54828009-4	12.5494437793408	0	1.35959827492759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113636041-4	15.7070605935054	0	1.35201289939118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83141533-8	45.0097197388131	-0.598528233045339	0.292483646836009	-2.04636477806544	0.0407204947438503	0.513604736802819	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4906595758695	4.83396402012536
Merged-chr2-71814204-8	35.2223245330621	0.500919993679959	0.32974645992139	1.51910650928406	0.128735688537985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46479308343871	5.07982074185671
Merged-chr5-146750018-4	9.70554417525291	0	1.35782014879005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12053439-4	13.7279528474515	0	1.34486314064574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137854083-4	12.5308741194902	0	1.3515177555698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107335331-4	9.30732500450664	0	1.34758490360417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75106800-4	10.4352261034087	0	1.34513199107146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73611640-3	14.42907071703	0.608025462968784	1.01952160048793	0.596383110154594	0.550919321018912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.39234354082305
Merged-chr15-34580066-8	36.9864307780018	-0.264187608050603	0.347666996019994	-0.759886935127457	0.44732217171979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15628324313139	4.90253292634387
Merged-chr3-68708427-4	11.2695336566899	0	1.35451994026438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38259452-4	22.8612325389919	0	1.34512888677448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74471924-4	9.8927710582516	2.16008693394743	1.18911122232176	1.81655583884729	0.069285150579802	0.727781932438156	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.13759034240505
Merged-chr7-66304138-4	10.9608021543823	0	1.34828122729833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71980246-4	14.3873692863984	0	1.35073144327968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55308668-4	11.0004139091357	0	1.34310881458089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22701501-5	34.4083738904864	0	1.34408310345293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112623960-4	10.2765471289601	0	1.34994008125135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54900507-4	12.5341428699572	-0.0356851350755156	0.99261988166295	-0.0359504536779293	0.971321865627547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.08976818821237
Merged-chr10-13304075-8	48.6567849023761	0.593540243157238	0.344346063360841	1.72367367108613	0.0847667706554837	0.821563111383319	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44755550837484	5.31419240050528
Merged-chr1-131068387-4	19.6465956318773	0	1.33813584013548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102700960-4	12.8121472881751	-0.0349307201435358	1.10685900549461	-0.0315584188863573	0.974824203780983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr12-38645544-2	5.02783247314604	0	1.44213474338232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-94688668-4	7.95471691921684	0	1.36437288708158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38692243-4	9.74900919517606	0	1.35351495297233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161500518-4	14.5742070190013	0	1.35138011825666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59251275-2	6.40686931051292	0	1.43192824695125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133584536-2	3.62886766180701	0	1.41536205856456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17136460-1	5.98899901410187	-0.856795183892758	0.903809972766175	-0.947981555537028	0.343138844053218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43512432291587	2.14086229696128
Merged-chr5-66038379-4	12.444938816398	0	1.35080388159126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115480470-4	11.85734029833	0	1.35182582539036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95574531-4	12.7219355103876	0	1.35239311712033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43507993-4	9.55894082230877	0	1.3569329914419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126885721-3	10.4344320312216	0	1.34270059502117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20749657-4	14.7428239199416	0	1.35256394639306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115650031-4	12.6709371405186	0	1.34344613234355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63151916-6	13.9490609092939	0	1.34650003935563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90226618-4	23.0970385398675	0	1.33782185748949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45673151-4	12.8269693146634	0	1.34233853542271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69012511-4	10.3904292315906	0	1.35283577300707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-117487077-3	8.70397033716618	0	1.3573107060734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24471349-6	41.7686451485699	-0.777026029677869	0.528823612729781	-1.46934821171632	0.141738366377931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55292144533106	2.28242002473277
Merged-chr19-9931520-14	124.908366508978	-0.247129574262257	0.217841746540566	-1.13444543200188	0.256607750970023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.67059649967222	6.41667599257691
Merged-chr15-30520257-4	17.1095359395903	0	1.34743746118062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34050622-6	31.7322336982789	-1.51355168641489	0.787177359989207	-1.92275815254092	0.0545104298391617	0.625947961106701	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62400334963741	1.08918047352118
Merged-chr5-99327159-8	91.7861722809599	-0.0516496842205667	0.210762846431223	-0.245060669350095	0.806409455804679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30727292115852	6.23215500979263
Merged-chr12-32111781-8	40.7621333637579	0.0463449182499404	0.255731148683027	0.18122515965931	0.856190847010026	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44367921213843	5.45245320391519
Merged-chr8-54562323-4	12.319459129358	0	1.37965826669859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100119599-4	10.8622907290452	0	1.346185793116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62294533-1	2.50331997793755	0	2.43310501298376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-61723185-5	15.1777231435752	0	1.3554899454958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135597180-4	14.396119321635	-2.20012083266214	0.899337459255993	-2.44637962092924	0.0144298975547619	0.260263514482738	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43014059632518	0.724326877898254
Merged-chr13-81793975-4	11.2119658363672	0	1.34535960938844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112507014-4	15.4104009307249	0	1.35008849123242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-98109245-4	11.0204526802232	0	1.36184910705113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10744325-4	10.3512692613143	0	1.35507301417263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6081510-4	12.9004822808752	0	1.36030625018002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62059228-8	38.8134198214382	-0.580112922192368	0.39306829518326	-1.47585783259853	0.139982061504156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87449462894489	4.19596695737649
Merged-chr1-92666856-4	28.2614635710583	0	1.34937633139054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16047921-4	10.3528200191699	0	1.34801348282171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108642250-4	12.4674210609992	0	1.3430373325786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12464175-20	141.897109518888	-0.295534403338652	0.211008346806138	-1.40058157798929	0.161339232961172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.31547073935551	6.97959951005667
Merged-chr13-10107032-4	13.3560263934713	0	1.35437474423375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119992000-3	7.48179999545767	0	1.36372566610579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25140515-8	77.1341477647626	0.302002237856568	0.284382037440166	1.0619596110043	0.288254021177472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82983228691355	6.13827042755736
Merged-chr9-118705697-7	75.3824127251394	0.874764831460013	0.274576167942182	3.18587311497556	0.00144317876941605	0.0479228801018246	C57BL6J_F1_Control-BALBCJ_F1_Control	6.70640263048823	7.62848820017448
Merged-chr8-83141016-8	46.9503500502269	-0.32731902202686	0.28899271038316	-1.13262034046771	0.257373723038756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24741493768085	4.9482348294046
Merged-chr19-41774423-11	77.7619787066799	0.714473172571479	0.239018117527915	2.98920090226229	0.00279708149948452	0.0802780112093343	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54810557196375	7.34571184364598
Merged-chr8-124242452-8	69.4260295475027	0.300076217103382	0.276537094494419	1.08512103105733	0.277868053734678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51041350964688	5.76596304366505
Merged-chr6-108537146-10	76.7011423265844	-0.0204335421099252	0.215457618334438	-0.0948378723754748	0.924443604623316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.85396735677088	5.81728792130968
Merged-chrX-21568196-4	12.2488481511736	0	1.34413382283383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150486241-4	16.1254023304771	0	1.3474610839477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-39923354-4	10.6959690963205	0	1.3520135418396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124627894-4	13.1745864332835	0	1.36030581014596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77709148-4	15.6980707666208	0.191205666865677	0.484350140523619	0.394767443773155	0.693014523654194	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47275255634029	3.80738056222216
Merged-chr18-38930580-8	44.7823011488062	-0.33505651177377	0.279802628897276	-1.19747449512627	0.231121662820631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17269766740212	4.85304798315924
Merged-chr15-25632373-4	14.3345463618941	0	1.34668861297478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72797225-4	9.08479800582731	0	1.35437777844849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16326084-4	12.384864246548	0	1.34902980687288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62164518-6	18.3320314008993	0	1.34188083138378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112264846-2	15.1225590950027	-0.114277999799769	0.563982211797806	-0.202626957746566	0.839426617830844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99783254049031	3.41811586077932
Merged-chr15-53556295-4	11.7285186321591	0	1.34652689822188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144943503-4	15.991477296428	0.56439072592401	0.693255244705412	0.814116777672327	0.415578055243575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	2.52916639857587
Merged-chr10-85970065-4	14.1379161379373	0	1.34586828850064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101540153-6	23.2869566723258	0.421290336096081	0.537009614532668	0.784511719520531	0.43273990797713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35204052049844	3.22411339621941
Merged-chr16-93914262-15	128.35263621666	1.1963222362995	0.169525502468028	7.0568865385025	1.70274541869077e-12	9.74337761048776e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.27627556637794	7.46572741638359
Merged-chr4-40364417-4	11.1449393626846	0	1.36574341221217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123399114-2	6.23772149594812	0	1.35459517508706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-54003736-4	23.6566919536187	0	1.34188724901401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115267007-1	2.61897117898344	1.19291208334417	1.40934985370882	0.846427223307913	0.397314457051726	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.724326877898254
Merged-chr5-150118499-6	54.4378243408086	-0.190543140680766	0.305721611700498	-0.623257020074306	0.533115636796523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.1968144668742	5.01945109190311
Merged-chr9-32633168-1	1.60501062300929	0	1.55977131838215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19794672-1	1.57600626772321	0	1.52981554342437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142926538-4	9.5122996785829	0	1.34593585904908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35052025-1	3.40769341649314	0	1.37705126193663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25451364-4	8.52837577904293	0	1.45147418470002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54897006-2	3.13578091134885	0	1.57335679636374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54959778-4	10.4658573115449	0	1.36290271879662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79441634-4	16.4651580470759	0	1.34510997952314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70831828-5	36.1616394435809	0	1.34191488135464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65740528-4	30.7335211938427	0	1.34740750954938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117728502-4	11.4682721911162	0	1.34589545797076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12230166-8	65.6154716804261	-1.74800455720628	0.235969080509209	-7.4077694985893	1.28441289890315e-13	1.02675589369818e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	7.07758141331878	5.33201935192566
Merged-chr7-141480968-4	12.7779506866781	0	1.34639378307514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83573303-4	9.27065005932996	0	1.35869147500115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53770334-4	12.376588608457	0	1.35793550844011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53415992-4	13.3398510120015	0	1.34773881861541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152810837-4	20.0642208730327	0	1.34512284132425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72272608-4	11.8637947527589	0.202488626705179	0.870702562240423	0.232557747601146	0.816104840263278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	1.62830504494315
Merged-chr6-145139987-8	70.0910566117118	-0.00213550006131949	0.218607844746945	-0.00976863416677244	0.992205881578933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.88276802663781	6.87110488923962
Merged-chr17-73944939-4	10.169671890335	0	1.36562605953637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128379559-3	16.8644465891139	0	1.34381965142085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119377134-4	20.3690164072053	0	1.3579021127951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35633860-14	117.164683736808	-0.0413239956485034	0.213610191332454	-0.193455168925852	0.846602512803709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.93907233512285	6.87864748841775
Merged-chr1-156617092-4	13.7357327348206	-0.678857972637071	0.842215491526871	-0.806038335160939	0.420220745451011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9272926343824	1.18984215491549
Merged-chr4-141643711-8	32.6089263455357	0.508890720099757	0.325772563687042	1.56210429245549	0.118263421855584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01409089321149	5.50984796578349
Merged-chr16-20316956-4	12.0124635489426	0	1.35637062022229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13295011-2	5.21486385993754	0	1.37581662677743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157417478-2	5.42581971899088	0	1.40421301545375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30137316-2	4.12760236356545	0	1.40038001785704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46994955-4	17.5111473517223	2.37887995535038	0.859548634356769	2.76759203640708	0.00564720976313499	0.134994140507588	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.66711269881543
Merged-chr5-36720939-4	20.7038571442179	0	1.35700316129456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167895212-4	10.5829569512756	0	1.34692702918467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137582427-4	15.0477747207968	0	1.34835004328421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95367838-4	14.4829250069	0	1.33968020987497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35493572-4	9.60172524114606	0	1.36304093837132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62630186-6	27.5866928249874	-0.426786697903076	0.432889645265168	-0.985901840275358	0.324181283754508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04474562072845	3.51604433769442
Merged-chr4-148656138-9	46.7142089332038	0.156072915030167	0.271356797788498	0.575157564881841	0.565184739130002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80378880708545	5.9926117506331
Merged-chr8-14643281-8	35.5305826509334	-0.138054233360456	0.329286551991943	-0.419252570520506	0.675031555535973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92360588856804	4.68325630083708
Merged-chr16-37682797-4	9.80457303711091	0	1.35067186942547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91182123-3	11.8725725764408	0	1.34822046646911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143023603-8	46.9735288608868	-0.174977352750366	0.363913630870414	-0.480821101237271	0.630643651742076	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15598279309645	4.97783318403302
Merged-chr16-33591897-4	20.4860431753191	-0.036887826078054	0.514388007455497	-0.0717120647126389	0.942831054632399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26193464270395	3.22704777696034
Merged-chr12-108204094-4	14.9782889948049	0	1.35079017426575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17885459-4	11.1472080794915	0	1.34446339749457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61794982-2	5.71058676001284	0	1.36940241321217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66106595-4	13.633572885303	0	1.34116642146182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9409225-4	20.3470454866285	0	1.34025296823757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63108845-2	8.31874364992823	0	1.41689138661841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94556467-4	10.7307198270735	0	1.34912444281312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47745799-6	28.0782307827664	-2.49668678434996	0.477544712422181	-5.2281738639433	1.71192488065548e-07	2.74508922087171e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21700416730748	2.40373656850996
Merged-chr14-87190876-7	45.8386297447082	1.11628985234346	0.250236567520584	4.46093815705668	8.16016379327699e-06	0.000749287742633014	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44193538100185	6.53833800351849
Merged-chrX-71053974-4	9.13901668997177	0	1.38364114110951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30577810-4	29.9970148780587	2.87178984350707	0.514327650529574	5.58358050660927	2.35616632607458e-08	4.94512916289916e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09282686802642	5.13762867285289
Merged-chr4-123996034-8	51.195770361483	0.241545765160116	0.280003185088118	0.862653634043842	0.388327932144471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08845831488963	5.40042611954682
Merged-chr17-50499559-8	44.5501109770622	0.0707459086920831	0.288252883949069	0.245430011741298	0.806123493469566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17094744417344	5.3298680424234
Merged-chr8-75226989-1	7.09625684010367	-0.453976759505883	0.848898507562545	-0.534783316805908	0.59279970064061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65704874563126	2.85476293333406
Merged-chr6-101555401-4	19.7188077370561	0	1.3449357490069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90932914-1	4.26494415171833	-2.66140292217065	1.08413035685356	-2.45487353559101	0.0140934158947395	0.25562362182921	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03717289800416	0.577068348605183
Merged-chr2-144720662-3	10.1307041940916	0	1.37849857278049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94370985-4	18.4968481546068	0	1.34997032601841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84617981-3	7.66958906053524	0	1.38739168719983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25548045-4	13.6332930370502	0	1.35200310892288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49047389-5	23.6925890230012	0	1.35717772544979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35379389-2	5.89355370839199	0	1.36562389112441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29772804-8	72.3577087908861	0.469755553089607	0.273293903504768	1.71886583295632	0.0856388047888929	0.825689923646582	C57BL6J_F1_Control-BALBCJ_F1_Control	6.17952603857122	6.77180924253614
Merged-chr8-85142722-9	95.3734296026557	0.455807967575246	0.199544064011329	2.28424719038181	0.0223570076023212	0.347428409449565	C57BL6J_F1_Control-BALBCJ_F1_Control	6.4375494951728	6.9522326343678
Merged-chr2-30591077-4	10.6513712942586	0	1.34686402436455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34480991-4	8.48336871062894	0	1.34892260806319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53566457-4	11.7539172601513	0	1.36140997957347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25897740-4	9.52160265640617	0	1.35271748161248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33125739-8	42.264066170368	-0.0727832683876362	0.269569529992395	-0.269998127717512	0.787161693998614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.88659259521761	5.81237372155339
Merged-chrX-48428770-4	15.4937658979691	0	1.35974715631597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86943487-2	3.36936130814072	-1.84430036451631	1.44499648221822	-1.27633553936762	0.201836932215546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr2-118263576-2	10.9200097691686	1.10937333085346	1.24960178475919	0.887781487177727	0.374658303025623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.67591700901439
Merged-chr11-114927701-4	15.4314655900672	0	1.36226551396778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97417135-4	10.8637158745901	0	1.34957263599397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37356766-4	16.0901950165983	-0.136698901581456	0.445163944180424	-0.307075412033037	0.758785972500682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91296185529155	2.9323967455829
Merged-chr6-134172535-4	14.8947207875268	-1.46089269218861	0.637735551916324	-2.29074996336458	0.0219778790965552	0.34271242966427	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26397892821813	1.4068548238317
Merged-chr13-10107514-4	9.98764260236077	0	1.34321149348542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8865048-4	16.7361783521785	0	1.34126133427759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80852191-4	13.5981227489937	0	1.34503650095328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137292592-3	15.7972372666968	1.4750282508224	0.745347592377419	1.97898036554668	0.0478182169292487	0.572292041844348	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	3.0255164625829
Merged-chr15-79243343-6	22.3182950736861	0.223232035125966	0.464178399169481	0.480918619921518	0.630574338586135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67376140570993	4.00068159871859
Merged-chr3-107134671-4	10.9360792893967	0	1.3609370704055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97660252-8	62.4428047166951	0.0172450541128572	0.295175335343828	0.0584230863759998	0.953411625908316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27587580369447	5.28301642954111
Merged-chr5-32112725-7	44.8313188728024	1.27072739831487	0.279264888669076	4.55025837430161	5.35800826357728e-06	0.000528595229037745	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28437383319217	6.53297123157033
Merged-chr16-21719910-4	10.0972666557337	0	1.34317134081107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12499860-4	14.7944843076999	0	1.35342714487869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105999183-4	9.29871777729673	0	1.35645908559134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98754901-4	13.5844805699926	0	1.35589241872245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171130070-3	5.74164377444743	0	1.37205862624748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53633654-4	12.134096928507	0	1.35103113256296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31129669-2	3.72804049172357	0	1.41693405979257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76828601-2	11.1096521533733	-1.2760068456629	1.19394521443294	-1.06873148804314	0.285190678671266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.55634759613363
Merged-chr18-32395801-4	12.8232625862436	0	1.35149687961096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123891446-1	9.2922648031117	-1.81224520862639	0.947085993385388	-1.91349594575722	0.0556845920364434	0.635782133692297	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32304776864408	1.08976818821237
Merged-chr10-40066639-4	10.6365160452871	0	1.34980184701565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35549295-4	14.9754329450183	-4.53311770251522	0.826313852059248	-5.48595148346877	4.11249765726592e-08	7.87152324476473e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09912043084031	0.577068348605183
Merged-chr5-25010540-4	10.1325914486306	0	1.35307031989653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148959529-8	53.6809104775495	0.528994810868603	0.27291538953506	1.93831066752887	0.0525853317206837	0.611048748825277	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94491287337422	5.50653347907677
Merged-chr8-117209318-4	11.6041361927685	0	1.34512496049942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74442095-4	10.1614981800258	0	1.35905046167939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84504530-7	35.8211083646828	-0.510708634711497	0.328275668374664	-1.5557310026664	0.119772071142702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.88976530410634	5.4582347835833
Merged-chr16-30968624-8	99.6090201164661	-1.18269823791091	0.196714458352931	-6.01225882333973	1.82955904380895e-09	4.92527607999297e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	7.29492489925849	6.11542479667987
Merged-chr10-82922160-4	13.0618034457596	-1.79639260482733	1.10164870813138	-1.63064014106129	0.10296627395282	0.928678228936679	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	0.601513806634888
Merged-chr13-12575157-4	12.2237550766837	0	1.34794466104157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105047491-4	8.95177937245161	0	1.36521242636487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79539086-4	12.7981804924327	0	1.34759005188803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120682888-4	15.1384695028992	0	1.35325165239673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-53766737-1	5.92081807462386	2.51335405805833	1.13603194205909	2.21239734993966	0.026939221840507	0.39471405930677	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.25429968924665
Merged-chr5-121722042-7	41.7597340594573	0.462459936770033	0.34909441017563	1.32474174117359	0.185256823611015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1357369947725	4.42207658771395
Merged-chr2-120008839-8	40.574810414994	0.337322828858641	0.31097145940085	1.08473886802526	0.278037327861635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60824287492742	5.15896548735578
Merged-chr2-168563415-4	12.7660066803433	0	1.34143699744097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101551658-8	77.1081985953016	0.0753898779441422	0.290144150480925	0.259835939546534	0.794990327071895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40029206713229	5.47411787006111
Merged-chr8-53496422-4	19.3502291135385	0	1.35903094630179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126696614-4	14.6100232613084	0.331356903607066	0.559034135891595	0.592731073709104	0.553361142239036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83556479495308	2.68787445423825
Merged-chr16-92676213-2	8.5592077087046	0	1.37876579380069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132653230-2	8.11235149409532	0	1.37244068008509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-95965226-2	4.01733530643307	0	1.43516937827211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43036316-4	12.5521313972506	0	1.34631921443321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65484595-4	16.1346280660828	0	1.34960453318344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22748174-4	18.5598762838699	0	1.34303019796022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10945927-4	10.9146654469293	0	1.34289797937487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6259339-4	12.0235768699357	0	1.35200300758546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157139531-5	25.7531598383977	-0.607583368475295	0.706150956911623	-0.860415697986989	0.389559935564514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70071892797997	2.09074318537823
Merged-chr11-83714182-4	9.78053665635629	0	1.34796367870554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120629559-4	9.80820574822295	0	1.34969476123954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141672423-8	49.2687487009859	0.120816573239938	0.280004757045647	0.431480430956545	0.666119078535946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90081424994642	6.00151397621599
Merged-chr9-103208092-8	56.6164974147412	-0.416306693771192	0.279202931207155	-1.49105416612662	0.13594727442349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32653672909712	4.89023373813054
Merged-chr12-70911960-4	19.4544814898117	0	1.34167848089666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164942969-8	88.6037961691427	-0.638408520244078	0.284434853405196	-2.24448063449743	0.0248014935465439	0.372015559518924	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36743358696001	4.69923346716438
Merged-chr4-155770194-7	32.17125741371	-0.391661907931067	0.740876175740378	-0.528646919358243	0.597050405734497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56070666783485	1.28728541095094
Merged-chr19-10495841-3	12.3981598401605	0.60306008594507	1.31380677710107	0.459017335316027	0.64622171745539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.601513806634888
Merged-chr18-56531619-1	7.4589890509622	1.18589244637661	0.830200092255562	1.42844171837498	0.153164758574059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	2.52042300943934
Merged-chr10-34193874-4	10.8468299512788	0	1.34461111597508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80427921-4	15.4226732515753	0.297934105478	0.748400101754115	0.398094688629379	0.690560389396622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	1.4965005622044
Merged-chr8-11473220-4	12.4771015928009	0	1.34367303455738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78887121-4	24.188143545485	0	1.3621685533532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55254052-4	14.8762334115195	0	1.36179735044217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54681768-4	10.9146506982485	0.892732046077479	0.880085480977561	1.014369700868	0.310406376412374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.45451904642141
Merged-chr5-65326354-2	7.15983659674709	0	1.35349723030208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25268676-4	7.99363378288371	0	1.34356606494934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122112420-2	3.34886231001335	0	1.51568317431882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34760694-2	13.3285019908874	-1.0951573111376	0.752737097558769	-1.45490014334268	0.145696908147263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61924261089574	2.1985101063361
Merged-chr5-125364069-4	9.99780034976421	0	1.36429418525335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86344531-4	8.89900471135971	0	1.34473458052471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44415080-9	93.0407616220359	-0.0634274604122654	0.229271024255032	-0.276648392959204	0.782050102110529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90923619373876	5.79377319842741
Merged-chr7-83863771-3	8.16552479089111	-2.73256198140221	1.2199455053223	-2.2399049543449	0.025097093943204	0.37551690879676	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62635771927786	0
Merged-chr8-86921165-2	7.22921888616986	0	1.36242627716662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128711603-4	12.1020961149514	0	1.34077669202433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70652320-4	10.7246019482134	0	1.35772675773798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6459584-8	52.5105346871452	0.875913737635286	0.353381865949596	2.47866068419091	0.0131876695663954	0.244498134365514	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05505915932979	5.95510356686195
Merged-chr18-4009310-4	10.4222051329861	0	1.35124388578286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81431921-4	10.7452999220703	0	1.3448351957764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4190784-4	12.6553711830812	0	1.3529244602304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10287633-4	14.2095885045385	0	1.34232114225986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118513155-8	65.6585659792902	0.39323152220392	0.265234688258059	1.48257954035532	0.138186156320356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6149305880709	5.99093127261042
Merged-chr16-24637566-4	12.6454379820389	0	1.353110136697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79520119-4	11.6719105180653	0	1.36204241230274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17409849-8	77.641322817395	0.50367341673636	0.272437916535363	1.84876401619002	0.064491895404132	0.697238453117186	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13428760152212	5.69222213653443
Merged-chr6-97829313-9	65.022100293195	0.394025347326452	0.25705584983139	1.53283944942277	0.125315417984609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05473558598634	6.46020785798707
Merged-chr16-31066896-9	54.388335333397	0.32272439626267	0.243487524788268	1.32542476885953	0.185030306329471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52135481517591	5.84611023372948
Merged-chr4-149780647-8	65.8128691744623	-0.331578079320901	0.307201019090997	-1.07935214636343	0.280430774865546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4586172814634	5.12005584652225
Merged-chr17-47441538-4	18.0431434635921	0.852746556571209	0.721245023737039	1.18232574022184	0.237076475955042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68598010415578	2.75914929466435
Merged-chr7-12780686-4	22.6466221540777	0	1.35779719587724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32335811-1	2.02980690374031	0	1.68409399970426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37022915-1	2.7788648572139	0	1.44345842439777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108447381-1	4.95002313302939	-1.51089549846805	0.738302734892183	-2.04644440154849	0.0407126673325827	0.513604736802819	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0359240131647	2.33413225201603
Merged-chr1-37472479-4	11.8343777084558	0	1.34053163784434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121255148-4	13.8764715166699	0	1.34590314022189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118910126-4	13.4384213055257	-1.14413588711976	0.763423240012677	-1.49869145600121	0.133953694260709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63617674289933	1.55528346522961
Merged-chr18-67194743-1	3.80122225776733	0	1.38403276499764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26497725-7	94.8259692166662	-0.920372131079307	0.425884415632218	-2.16108431606503	0.0306888268756583	0.429398697589165	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3163687519925	3.19562469115465
Merged-chr17-48043713-4	13.0290351874627	0	1.33804970943072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15671880-2	5.87817298429171	0	1.35482929100068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79356885-2	2.87941801239098	0	1.52355888125127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86596357-3	9.07006664371913	0	1.38982576645092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83109957-8	46.8174951553813	0.123457488882166	0.27529838861103	0.448449733051649	0.653828656195309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.458756833582	5.4405042027697
Merged-chr17-28420565-4	15.5813859682871	0	1.35135826496638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65424890-1	8.67381380165933	1.38286922876429	0.910553069544748	1.51871348855668	0.128834629884516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38268966767817	3.19312919041124
Merged-chr9-23570353-4	12.3918689717691	0	1.35807595827004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51889791-2	3.62304953916436	0	1.40653805358477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124053752-4	14.7880672766273	0	1.3433870367476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87509293-6	26.9226232335609	-0.0364756883824536	0.475795453776458	-0.0766625407891998	0.938892004926052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60029881927397	3.56486927713185
Merged-chr18-79759058-2	11.2286110911132	0.707053292569959	0.585246241473481	1.20812957429646	0.22699742558928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94950034359837	3.65370270197677
Merged-chr7-139131659-2	6.75846382342591	0	1.36871388188301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24348189-4	16.1368713064106	0	1.35219833772085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120629020-10	133.337354044001	0.00901141068454305	0.208220097530828	0.0432782944173237	0.965479693553715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.61462503799658	6.68936977401662
Merged-chr10-99204740-4	8.62917861092535	0	1.35874903724313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40229589-4	10.0440524168113	0	1.34647271390303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36303575-4	14.2376200704562	0	1.34526676768298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165946375-4	14.2637744283712	-2.46270774442452	0.919635434851539	-2.67791741280835	0.0074081482061333	0.162838466776062	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85894914094816	0.878778741524029
Merged-chr15-98992692-4	12.4464056954548	0	1.35045330183716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79633648-4	19.7498471849446	0	1.34029545369109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93997188-4	9.08743950280834	0	1.36668201944334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124377349-4	13.9885985623817	0	1.33985217910513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42031225-4	9.06283031422752	0	1.35325583372254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53256395-4	15.1301976238744	0	1.34902714157773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64471753-4	6.956902968564	0	1.40406523584683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100642643-2	5.14224591905224	0	1.4053113609904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131680255-3	17.8872356358964	-0.177500280186189	0.477023549283649	-0.372099617414575	0.70981868117781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50987620327687	4.46340531459463
Merged-chr11-79305683-8	41.9788719586949	0.236029829065741	0.472714165423371	0.49930771347702	0.617562621950142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2180769473006	3.32420198250756
Merged-chr6-145830337-4	16.0792428141752	0	1.34770089725008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81155153-4	12.8076786150166	0	1.36690624176253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68473005-4	12.4843175470782	0	1.34814308378674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23592723-4	8.347839040418	0	1.34940076155786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100400551-8	36.624218330143	0.639718023728279	0.274632687163137	2.32935864385391	0.0198400740339987	0.318419422620057	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35724981086939	5.97376305322428
Merged-chr17-65726519-2	9.85020042805439	0	1.35964218183638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80138987-4	14.4271684919145	0	1.35641500327126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39781110-4	13.0585841391432	0	1.34202981173189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79330291-4	12.9495975352488	0	1.35576383837213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64156376-4	9.50639557315228	-0.698533977387492	1.34257126589024	-0.520295641009646	0.602857533578411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr11-53560149-1	4.19432023954333	0	1.40413204908862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-105650911-4	10.4951108290423	0	1.34220741677794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167361788-4	12.0120070657859	0	1.34163898157182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64367791-4	17.539381232528	0	1.36148326244505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116433943-8	97.0932578711268	1.01855394660205	0.208818210221807	4.87770652530804	1.07326449772454e-06	0.000135049964888445	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79294621635037	6.79258595623054
Merged-chr9-44567796-8	54.2664294625886	0.450933295964916	0.315065346526813	1.43123736372746	0.152362198520596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85826946103061	5.31002689239013
Merged-chr1-162563457-4	15.5800668527586	0	1.35613444425659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117168833-4	9.72844319551995	0	1.3463067779317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-15848196-4	14.6932611873753	0	1.34714800733403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33077306-11	94.6351446278171	0.872622087835896	0.223213698286907	3.90935724166119	9.2542024698563e-05	0.00552194502808912	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8405434130342	6.73390763472628
Merged-chr18-54978857-4	13.3344389810331	0	1.35224563531075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181739546-4	10.1959411018733	0	1.34745472102042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145468913-4	20.7799275494755	0	1.34087030241614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119798352-4	15.4713586303639	0	1.35035699446715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37426044-4	14.6394548847446	0	1.35641032034516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-75127114-4	16.2701898056423	0	1.34396498464982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104570611-4	9.91513425108387	0	1.34987627217895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34538115-4	15.4426044841749	0	1.34142310207103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121748501-4	9.34905441207949	0	1.34879984283222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136497999-8	46.6834156023866	-1.25915181081673	0.251071153782927	-5.01511938685469	5.30005453754258e-07	7.36843131985363e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.32538715019126	5.04118643788247
Merged-chr13-43775401-4	19.4390897830444	0	1.36248308688157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-117470665-4	11.9228011930896	0	1.35580251592963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126607675-4	10.6863063148828	0	1.35059420275848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92478489-4	11.0483007955362	0	1.3491529025179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8700379-4	14.2902808795983	0	1.34545213415781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146135611-4	8.69972976307712	0	1.35699239698416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131974270-4	14.3883144438739	0	1.34597781591412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-67587626-4	12.9368050384306	0	1.34501586441817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8630042-4	15.1529881090798	0	1.34005149932672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61489725-4	10.1833966447837	0	1.35481215181747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78791659-4	10.269122091074	0	1.35124234311601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94776501-2	5.93042955561117	0	1.37625119853847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101381961-2	5.13935540201951	-1.88022963105976	1.27484456884792	-1.47486970333876	0.140247576969861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr7-96539394-2	11.1899750642275	0.360865797382739	0.664522724446632	0.543045081992107	0.587098763113322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78348390616087	2.63260596865369
Merged-chr11-20193273-2	6.70957173344301	0	1.38035925785986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10408377-4	10.3374966976432	0	1.3427464111626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118665684-4	13.1459144384539	0	1.35099047633381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17878617-4	9.34576765626693	0	1.35062761116294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34536066-4	13.8981891930006	0	1.34610756320908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69613458-4	11.4410285241871	0	1.34635511498138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132212496-3	16.9112970636583	0	1.36869129137198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12478545-2	13.5146331233214	0.384248807856508	0.717152600274649	0.535797831185931	0.5920982812723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16286647593625	2.25285891757623
Merged-chr6-52672811-4	20.4349833841316	0	1.34870604559805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59120686-4	9.38726911968767	-0.0138514595395799	1.26909847329227	-0.0109144087957546	0.991291734626284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.601513806634888
Merged-chr19-10510962-8	53.3478342613324	0.376791652578741	0.255065588725954	1.47723436336828	0.139612825421912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36983680614918	5.79919539930117
Merged-chr9-66383587-4	8.59942178383136	0	1.35677157761986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132247691-4	18.0420168789965	0	1.34238025737359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160360641-3	24.7288550206381	0	1.34426783229958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17408291-6	41.2821995944812	0.747620462655814	0.539181465039706	1.38658413007717	0.165568610268278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	3.35859990940591
Merged-chr1-149891268-4	14.9851080639821	0	1.34918781212766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-6406584-4	11.0639078578978	0	1.35895747190228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126110863-9	73.4998784073928	-0.25997993516473	0.33638094868818	-0.772873541675298	0.4395972246309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32832393751154	5.03131990400787
Merged-chr8-35654430-8	37.9548174267388	0.520039165123177	0.326337140830945	1.59356413983101	0.111033691725339	0.970210649171789	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24794999376712	5.76192713145145
Merged-chr3-96578340-2	4.53025031592774	0.451654431318946	1.00718459171308	0.448432625990381	0.653840999949722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	1.6227392896897
Merged-chr7-123455295-2	3.81709161579837	0	1.41622419498003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100314450-2	3.42999634925475	0	1.58397933932334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83742354-4	13.686178353027	0	1.36119486227426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96910113-2	5.06068027109966	0	1.3751282475924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11293403-2	3.31476119642173	0	1.43666426994218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60273913-4	13.9265549381871	0	1.37265878003072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99739167-4	15.4548212731911	0	1.33745133394183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36208678-1	3.89712905959212	-2.47434450000551	1.2410801408844	-1.9937024358816	0.0461845830313249	0.559345179297054	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38660038197036	0
Merged-chr6-8339669-4	10.7417162515268	0	1.35227248488758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126305619-4	7.28920861049198	0	1.34541589457969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93946092-8	91.2439180218608	1.7221453190187	0.304854501558168	5.64907295190492	1.61315392659775e-08	3.52166402794889e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.314436350909	7.16363642077902
Merged-chr2-167951456-4	16.2086926070613	0	1.34223102515569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47365263-6	29.2131078486689	-0.0999815153153379	0.471771544792876	-0.211927820613329	0.832163345823697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70381930644174	3.38677284565114
Merged-chr10-96075604-4	9.33681593462716	0	1.35582759426004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75268053-4	12.752993880493	0	1.34372029732323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36265419-4	10.8069741475443	-0.0573782905449292	0.753239404804759	-0.0761753702460663	0.939279577439266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82166021832917	1.97656658922368
Merged-chr4-132962834-4	13.6526356933026	0	1.34268854347412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97355281-8	53.7989296695397	-0.2915470701061	0.30244331068795	-0.963972618349321	0.335059654001307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07603338364225	4.64839821330232
Merged-chr3-158062396-4	16.5440311339227	0	1.34861654878772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4920783-4	8.68258677674678	0	1.34930660802343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90216483-5	28.0586149291057	-0.890436768879315	0.591532653659712	-1.50530450579581	0.132245807306417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77752175629353	2.27029500171431
Merged-chr9-105034163-2	16.3883728068672	-1.02715157047305	0.393918189442637	-2.60752511054741	0.00911993811317552	0.188713633762508	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3043850388071	4.27236945461745
Merged-chr12-35833497-8	43.9592453721163	-0.250759448884893	0.328619335005425	-0.763069674158866	0.445421844632636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64559400838592	4.4820346263423
Merged-chr8-86873267-4	15.1054901227334	0	1.35792355803728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41432472-4	10.1939671575141	0	1.35354529046425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79927794-8	56.0394476840101	0.144952729269356	0.221627348388086	0.654038097390097	0.513087261208377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.35787102509515	6.49775222578788
Merged-chr3-41412861-4	14.3188329211756	0	1.36165305043428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38982273-4	10.0060580273603	0	1.35377590946045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32564641-8	77.0441260132434	-0.536947742604591	0.283197706910389	-1.8960172681571	0.0579577611651379	0.652553011428279	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64921523967539	5.1585669572955
Merged-chr2-167771776-4	12.3900689124465	0	1.35116161835207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79321858-3	12.3811603392316	0	1.35486931207436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3308525-4	15.7770412004065	0	1.34771791078856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184615490-5	19.9617368543672	0	1.33530008790336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19872995-4	12.1856298208526	0	1.34663223201948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165751374-4	13.1301436501431	0	1.34888017070057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56467380-4	10.6658001642526	0	1.34845999931359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100432057-2	3.71700804941666	0	1.39704386092653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34495507-4	12.1746318550623	0	1.34823971786818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12833306-4	11.064671129229	0	1.34098604209163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83131901-4	12.8840937766806	0	1.37923136877067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21036346-4	13.2257015534089	0	1.35353123054084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121741091-3	10.879576939288	0	1.35191733427672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-106031807-3	10.5493081327357	0	1.35031207451918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20803744-8	28.7698309326912	0.771903442953366	0.283926104832461	2.7186772537483	0.0065543527214012	0.148639157105819	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74581172624082	5.50519644820039
Merged-chr2-29661910-4	10.5084200347941	0	1.35752863931259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53421424-4	20.5833676535501	0	1.33741113189249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101412935-4	13.0931979028631	0.420175958464303	0.85164006005653	0.493372703060038	0.621749266222126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	1.43881745552618
Merged-chr5-124075094-4	23.113597462562	0	1.34676876808704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12344703-1	4.72495197839628	-3.05535741520572	1.3061728616835	-2.33916773563013	0.0193267541891359	0.312970665370429	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	0.41385117919798
Merged-chr14-55696808-4	7.95269182811554	0	1.35307711252601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143803740-4	11.5422024713758	0	1.3464696002003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8624739-4	15.2534331060971	0	1.33834124174813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156450737-8	60.6420216161017	-1.53587961386667	0.282646324116205	-5.43392743093033	5.5127007825763e-08	1.02624966383584e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.31814291334894	4.70570592906328
Merged-chr10-17698099-4	16.136106756591	0	1.34893771350223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142490643-8	60.2199132185285	-0.791526541573392	0.233834830539988	-3.3849813551965	0.000711830894421816	0.0278778210301697	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00038520340672	5.24292204755948
Merged-chr18-12188818-4	9.2274467437693	0	1.35184143688483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104139772-4	11.9947028172396	0	1.34893621485796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80731279-4	10.0637887589015	0	1.35160689400392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125735959-4	13.5048709203856	0	1.35044013150823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100143963-4	11.6661637402418	0	1.35027792235265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55747395-4	24.7615967389933	0	1.34183800730056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118279704-4	12.3250918238864	0	1.34551325057472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75845966-8	52.3766447869634	-0.0634157785504928	0.27943039913181	-0.226946598321176	0.82046526703299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05953816393629	5.00526821885781
Merged-chr7-29492086-8	57.2272542236725	0.0232312771816188	0.234896086030318	0.0989002310520423	0.921217485453822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43681699832826	5.52884808030074
Merged-chr10-14053283-6	23.7564744087443	-0.392456172293565	0.530265304078084	-0.740112862892071	0.459231514405462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51925904886557	2.5974210596722
Merged-chr4-46630555-8	66.4794636337928	-0.847261587856941	0.296646673574039	-2.85613041821443	0.00428838942769963	0.110218704917411	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30402019997663	5.3830184550453
Merged-chr18-34538369-4	10.9999507662694	1.24941057957153	1.31968419743827	0.94674967086584	0.343766353275021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr10-8768930-6	40.8649285959618	-0.954137563798605	0.755990121521108	-1.26210321621506	0.206911648125648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18907334447161	1.30064958020929
Merged-chr9-96395381-10	86.1487284307209	0.0685594581358246	0.197699117591844	0.3467868697187	0.728751442167853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.49542574937714	6.5748340578318
Merged-chr18-4908359-4	15.3329022764393	0	1.37275091433893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54519576-4	12.2285365849722	0	1.33927513505489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-89162556-4	16.4336930514098	0	1.35302117350844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31400360-1	1.95283000442181	0	1.52050454675482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154286591-1	3.50074635775828	0	1.443330695277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137830383-4	10.9102160395209	0	1.34363203014544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54934059-4	11.9540755870381	0	1.34749668930606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94273797-2	10.7145093127531	0	1.35203095813204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27976474-3	7.82508973773919	0	1.40571343375141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166127355-1	2.10674898536568	0	1.62419811498905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110770079-2	4.14373602998341	0	1.40337799161217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14132410-4	13.2695648728113	0	1.345474360404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52120358-4	15.4753733483898	-0.706177893471432	0.998327955003771	-0.70736063227716	0.479342395023668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.577068348605183
Merged-chr16-24625194-1	3.95352825459734	0	1.37048094332765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96231469-1	1.58845739408627	0	1.55633041287512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55430819-3	6.62222289056803	-3.27266281885885	1.15937553915677	-2.82278063347714	0.00476091348107992	0.118945111084614	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6342703608096	0
Merged-chr13-59875923-8	104.923823304494	0.613445376500551	0.271473308499521	2.25968946962472	0.0238405303162619	0.363382532520727	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06739673657722	5.69306841245988
Merged-chr12-117479191-8	51.5719229972682	0.125508433345815	0.298405624894516	0.420596741064051	0.674049573875366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63086394735638	4.80790372869223
Merged-chr6-83008780-8	62.2631099188532	0.342818770041855	0.238009690535939	1.44035635385228	0.149766605327028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44944612260649	5.8331378674552
Merged-chr11-69931163-4	9.4790468407266	0	1.35145358196518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91485111-11	51.901080937268	0.336318531712736	0.301187161169122	1.11664298839049	0.264147003294425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74316698334105	5.07428331261694
Merged-chr7-45099020-7	29.5241662489358	-0.0213307506449076	0.350294422437862	-0.0608937775727542	0.951443805028967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81195487683729	4.91382795844185
Merged-chr19-53303567-4	11.6111434797246	0	1.34131660718246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99382694-4	12.9591902043819	0	1.35090493954807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30850458-4	8.62866878154981	0	1.35028162360228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90215413-2	4.68685994817308	0	1.38011066573408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80754220-8	39.8989798042641	-0.334111063942044	0.276949213342729	-1.20639831364524	0.227663945965768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92163980979454	5.61591736149936
Merged-chr2-154992761-1	6.71014375880794	-3.04805954283821	1.16679879182849	-2.61232661893795	0.00899282935088788	0.186940476826419	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8405601103675	0
Merged-chr17-10392557-3	12.6618157500589	0	1.3467657816488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139166455-7	68.0070032973234	1.65302604468608	0.241364948628775	6.84865824170879	7.45458457739869e-12	3.52368489602448e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37067459261208	7.14149549054412
Merged-chr13-48550742-4	7.91162771950341	0	1.36614466742409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72449602-2	8.87459783338884	0	1.36101785573557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37793104-6	37.4610602439648	-1.38061057130516	0.449500601088931	-3.07143209143789	0.00213034616883781	0.0654256990914431	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20690156123302	3.90818933018474
Merged-chr14-27123712-10	102.499985985574	0.173585254764442	0.266725437907791	0.650801273871944	0.515174777802096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.86965010966344	6.05401513934442
Merged-chr6-34293038-4	7.59241996301219	0	1.34646789527237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73547433-4	14.3065891936535	0	1.34291786567947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97394678-4	13.364734335968	0	1.3467711240013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134785118-4	11.0985811099236	0	1.34584604068161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-118296410-4	12.8490295369927	0	1.35602721775893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94711516-4	11.8104734751274	0	1.34939994257003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48975217-4	10.9330086156613	0	1.34360591420813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21066582-8	43.6388671202415	-0.572191112903841	0.325559552361475	-1.75756204587886	0.0788220560189427	0.788137114614118	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50423446611211	4.87252383796432
Merged-chr3-31342754-4	10.632178488337	0	1.3440076029644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91231990-4	8.04711051287453	0	1.35423980231916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118135449-4	11.4640048114051	0	1.35143540308971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105926569-4	9.9650475790187	0	1.34848136914937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120118390-4	12.6436518799058	0	1.34563509398096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56744411-4	13.5462844957204	0	1.341875601812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167227373-4	8.85825056797248	0	1.34162214825865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41311293-4	22.4113107384575	0	1.34510773558123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7632727-4	10.3446972923672	0	1.34970306198283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85519748-4	15.6385135011165	0	1.35733660070241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143130579-4	11.3215209019425	0	1.35908795782011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19968895-4	11.7147696873556	0	1.36355713778499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19068543-8	41.4506450768133	-0.521493687897234	0.2767640940625	-1.88425340961848	0.0595307061949141	0.662984973990849	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53436447014713	5.05162072392008
Merged-chr8-34918653-4	13.6585830220049	-0.0352983051979235	1.10702431052389	-0.0318857543256832	0.974563159265299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr11-87461936-4	13.7725808841321	0	1.34859507105547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32506857-4	10.6135371196234	0	1.34913852912998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108997945-4	10.4646536821793	0	1.35488685325356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4332909-4	10.0281447998757	0	1.36716037188348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101653631-4	13.9709356022811	0.273087298967736	0.954767637805427	0.286024879933549	0.774859065808186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29281866668399	1.44075340970692
Merged-chr10-40094933-4	21.5976749835616	0	1.35068807827535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126666588-4	25.5562510647414	0	1.33884809802329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60710156-1	3.83974073387524	0	1.40977123149731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144299330-4	9.3059714545921	0	1.36679785422529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7857350-2	6.01898432396346	0	1.39323971025455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139198188-8	39.6253974961201	-0.00549696988410707	0.278028453687392	-0.0197712493494918	0.984225853094671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32370049938039	5.297459235199
Merged-chr3-98057211-4	17.1432996083903	0	1.34712654587949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94162733-4	11.7834548213584	0	1.34943756689311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120425002-4	9.14647085261603	0	1.34604132629261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31342187-4	18.6391818540858	0	1.34542604321805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31038590-8	61.3157201503122	-0.261692867923311	0.258828781655837	-1.01106556330077	0.311985051035983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43785836819306	5.21854410847383
Merged-chr4-126110208-4	13.3006760821637	0	1.36289813460172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62005156-5	14.194087670063	0	1.34694098579651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40435573-4	9.77999242048964	0	1.37434366413931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17770770-4	8.95743905720845	0	1.34846989931223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56264475-4	10.1073853159512	0	1.34922334087618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59316808-4	10.7044573054177	0	1.38069552376376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62374973-4	10.7999256174432	0	1.34730230262935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40392531-4	12.9855879283231	0	1.36366454490631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114742876-8	70.5761410242938	0.318960751576928	0.238011007361367	1.34010924584113	0.180209830601025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4350388766044	5.75308178329589
Merged-chr2-60892369-4	9.94839220134608	0	1.35582910689517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13347394-7	24.7478448716825	0	1.3354415533585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150922321-4	11.4071414589968	0	1.35092472939855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-93963208-4	15.0439690357466	-1.17078895564861	0.958768145999155	-1.22113877117653	0.222033482155187	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	0.577068348605183
Merged-chr1-40393421-2	2.55656027442409	0	1.56059856438307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11187387-4	11.0243886690734	0	1.35200423999091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55574765-2	2.49571924510615	0	1.65920162710588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61330934-4	11.5151315824032	0	1.34514969996303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120043265-4	26.7885576527237	0	1.3599115774892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135313572-2	12.2598451620593	0	1.35058456074711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36025057-2	2.55385015415719	0	1.61577283287389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17766631-4	12.9177493894503	0	1.34411407590389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78487880-4	9.76752000341921	0	1.34365607320193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64210955-4	11.1518985228814	0	1.36387893352617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25370405-4	11.0116536190235	0	1.3538565622515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-91302313-4	16.5425519265531	-0.037982095186692	0.692091997651555	-0.0548801247747047	0.956233966144318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95160684218358	1.92835129883284
Merged-chr9-105123582-2	9.24168787550001	-1.33383283428246	0.588167517672234	-2.26777711146191	0.0233427951408222	0.358144934156663	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57893522550495	2.13869887539473
Merged-chr10-20834721-3	18.9133306927755	-0.307097900232888	0.597754938441424	-0.513752175822436	0.607425268081241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21486150294643	2.92578411131222
Merged-chr2-152112114-4	13.1934258346693	0	1.34723619275526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39650161-4	13.8243952760073	0	1.3468630111795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111655439-4	13.4309091939915	0	1.34670548403104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4493309-4	10.8602306226178	0	1.34551703407983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11929732-5	39.9386739549174	2.84987418316835	0.51562009191608	5.52708132954637	3.25602045192716e-08	6.45963561117914e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2046848628481	5.22944669940968
Merged-chr16-30024897-6	45.5474965685984	0.0704304747456248	0.429907422716489	0.163827073048868	0.869867278407967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83547202501241	3.71379616820334
Merged-chrX-107330073-4	9.85920876417513	0	1.34541538063968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100110201-4	18.0300369140599	0	1.34235545849133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132180899-3	5.42781686214767	0	1.38302752072315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126833647-4	15.0108707817626	0	1.34806972948334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16296971-8	52.6204312829405	0.798994397336823	0.256617877588031	3.1135570321391	0.00184846780904495	0.058692092074693	C57BL6J_F1_Control-BALBCJ_F1_Control	5.142388296675	5.95054624946189
Merged-chr2-11212202-4	9.87361945836751	0	1.34976079509473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77786217-8	35.3116195772346	0	1.33425110184442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96807429-4	14.4521053407121	0	1.34209663743778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45699041-2	5.59608523865075	0	1.36941742923786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33878351-2	7.04694308534413	0	1.36488604337187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111721217-4	16.3067122073385	0	1.36089362244283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170217717-4	9.82645876884537	0	1.35583573036536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129810405-2	4.88084902563566	0	1.37378573239688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129948587-4	11.0631892193614	0	1.35662909999812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97673061-4	11.7430911824097	0	1.33936850953952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-81973825-4	10.4816002219904	0	1.36307313073635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79141686-7	43.4052377467246	-1.12638657547687	0.360144071444351	-3.12759993787907	0.00176239891912149	0.0563211304200617	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00608169993613	3.94690550879938
Merged-chr10-13935553-1	5.81409535693497	2.72043781984263	1.14150773915392	2.38319700036286	0.0171630069121436	0.291096378389147	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.62144175773092
Merged-chr7-118482574-13	96.6577827002496	-0.253656395317072	0.195720133946262	-1.29601584774471	0.194970025061037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.96439135355378	6.75916919243879
Merged-chr17-30570355-4	12.9076843420393	1.25930942813543	1.30604759250055	0.96421404194342	0.334938625784513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr7-110557193-4	7.4263142316025	0	1.37933691960635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96338798-4	13.923878658272	0	1.35678198689639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81997379-2	6.70401561114622	0	1.36212627967168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-81572187-2	7.4071189436441	0	1.3573469001982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135196553-4	9.26498741871223	0	1.35338454293712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84850641-4	8.73903772764421	0	1.34281409126612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121507516-4	8.85497736740345	-0.0341506949806467	1.27622906194929	-0.0267590638693695	0.978651903815972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr7-104400924-8	80.4142790463897	-0.356200487175652	0.296226390743359	-1.20246034217881	0.229185222290842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74516997681916	5.31874188251454
Merged-chr10-20076935-3	12.5807422115181	0	1.34537796201845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8007453-4	15.7315794786186	0	1.35508362044822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25058005-7	38.1328074232868	0.0105376631536039	0.261317106648941	0.0403251945069192	0.967833867799905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9273349785519	5.93418029875919
Merged-chr13-23518159-2	8.51309322987767	0	1.35818669912836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103159210-4	8.4547738488701	0	1.3451522184402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120754867-4	9.06192888172537	0	1.34784270537172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94994963-4	14.745825874625	0	1.34247200256833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110778038-4	11.9362519359789	0	1.34876243150762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150227378-4	13.656952853525	0	1.34079123115614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81102310-8	72.9128580285438	1.09182993749391	0.203948873399827	5.35344922133235	8.62932594072465e-08	1.50415245649992e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62342246847111	6.72880050175092
Merged-chr14-77794704-8	90.7710507510334	0.565023078565074	0.26329197593863	2.14599429606915	0.0318734337731372	0.439413641002781	C57BL6J_F1_Control-BALBCJ_F1_Control	5.81573768118247	6.36562349559347
Merged-chr6-134135067-3	10.2947109741073	-0.0445275038869286	1.27962431549435	-0.0347973255491995	0.972241353244199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.55634759613363
Merged-chr10-117899671-8	70.2500601367062	0.232712078411285	0.273319914130154	0.851427453253436	0.39453194692385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62063141152439	5.85372894897688
Merged-chr14-63111819-4	9.84076681675044	0	1.35321564219213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59238813-8	72.3953546336737	-0.219758496304143	0.264807823318858	-0.829879168786981	0.406607103716181	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34200014088989	5.14767853213114
Merged-chr5-77460526-4	10.7407827495356	0	1.3459157802217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3894935-2	8.69419983438192	0	1.36442478983447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43019992-2	6.78458208150308	0.419282340924659	1.26885248312454	0.330442148713914	0.741065898335152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.577068348605183
Merged-chr1-64407491-2	2.13308766793055	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103939738-1	2.90224844315765	0.0108973051808097	1.23263999832284	0.00884062272491307	0.992946295502301	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.56608458088645
Merged-chr14-25527501-3	13.0253328739979	0	1.36733927404713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52952403-1	2.85187051824302	0	1.49166004662102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127603193-1	5.83585947052647	0.484886409063609	0.781204392360829	0.620690838153462	0.5348030586864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62235589016187	2.41734449426204
Merged-chr15-63155923-2	2.14536657235145	0	1.60500701386401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6889649-4	29.6975695095462	0	1.3628197968342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122575062-1	2.58698650815634	0	1.51874801130545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14635481-4	12.5534152297134	0	1.34236415999669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-47510-1	3.6197441615094	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114520311-1	3.36024958650696	-0.0352113413645749	1.47418046847939	-0.0238853668987319	0.980944046477345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.41385117919798
Merged-chr1-151036689-3	13.5908525129396	0	1.36414964735041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26442818-4	12.4781262043918	0	1.36260600947395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183669097-2	9.00053981372607	0	1.36599289417724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72589666-1	2.85877816949803	0	1.47976522541261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84070368-8	33.8429475938321	-0.116590069174658	0.2857627061495	-0.407996098391028	0.683276539323752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29790144412098	5.23586275992184
Merged-chr1-161076451-8	68.8881840341899	-0.336241152363099	0.225699124446032	-1.48977606000195	0.136283127837518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.70714809691775	6.38446471117018
Merged-chr4-6222234-7	127.660913719765	2.36482801503526	0.200450560967454	11.7975624693773	4.01781596159848e-32	5.4601114464133e-28	C57BL6J_F1_Control-BALBCJ_F1_Control	5.95995924442148	8.31447062953425
Merged-chr1-23983299-4	15.8607844141259	0	1.3453315232518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167769959-4	14.270915231004	0	1.34766929723687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66189033-4	9.17869227468194	0	1.34350526579097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48856746-8	24.2728077434757	0	1.34024214627254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65136388-2	6.24918853548196	0	1.35871464532031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126630286-8	49.9442264078473	-0.580172936246342	0.256987513419666	-2.25759192937482	0.0239711122823384	0.363877601942371	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54054347379582	5.91964519187853
Merged-chr11-68475852-4	16.1404007257548	0	1.34774911258229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78219363-4	10.6235073382015	0	1.34883632322417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94107311-8	39.3103835278437	0.238308422949216	0.342547219271479	0.695695102870911	0.486619793031493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21196692784746	5.48370410546124
Merged-chr7-43346382-7	35.7170670842783	0	1.33481842610789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79258971-4	16.2734243829894	0	1.34395359515288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6459810-4	14.4808469694163	0	1.36169479218329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39680829-3	8.49252418593874	0	1.35043685694553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167716982-4	12.4049687196364	0	1.35990301190508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67386141-4	12.4371655516729	0	1.3409702393171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101252798-7	56.2724726631487	0.590046147568918	0.219474510240589	2.68844954670183	0.00717846827385391	0.15933620126518	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20750443551711	6.83915445067703
Merged-chr7-35171992-8	36.6440114456253	0.201456129739931	0.283817679303368	0.709808248148623	0.477823053541303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5168770607004	5.53875849543342
Merged-chr17-34341189-8	49.7819657910481	-0.210851904087991	0.285981060284853	-0.737293245496647	0.460944038902829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97877987405772	4.73620047084775
Merged-chr9-66882049-4	12.2092301525813	0	1.36619484016003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33531358-4	18.0887831057232	0	1.34419104676641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21079964-4	9.81152460499385	0	1.34355604213685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67604604-4	10.3310094648902	0	1.34364326568351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118768195-4	10.9595803160266	0	1.35138998560859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60982134-4	13.3822658897534	0	1.34506063992012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88668780-12	137.21177404135	0.364009719552927	0.202693393602677	1.79586375797952	0.0725161876163337	0.748416070369525	C57BL6J_F1_Control-BALBCJ_F1_Control	6.6514394003287	7.01871096540968
Merged-chr4-87683044-3	19.5873101754226	0	1.34717505378237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34886672-4	17.5332577225733	0	1.34725411892118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82151189-3	14.625141602563	0	1.34072636852751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57530837-4	20.1364512115251	0	1.34506397839292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39666370-3	9.54531062981765	0	1.38544643067499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101375092-4	10.1259626320283	0	1.34420822740686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102055159-4	21.7718279320257	0	1.34843943748707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113444691-4	11.9766415091903	0	1.35092736246105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50061905-2	5.33771849936461	0	1.37139149913985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157153413-4	9.82854263127859	0	1.34562460146522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165667601-2	5.47691099135347	0	1.41694306017358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58116931-8	34.9138697165564	-0.0736421841145575	0.287870330997944	-0.255817207210157	0.798091986482089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11521696137156	5.1136852209858
Merged-chr9-110938062-2	15.8333979645561	-0.655465657351738	0.54569188329499	-1.20116438858118	0.229687440281429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29969394493008	2.89546280739407
Merged-chr5-101968276-19	291.588891962566	0.347840351207715	0.123463220799068	2.8173600927989	0.00484202050604792	0.120405943590237	C57BL6J_F1_Control-BALBCJ_F1_Control	8.43861859639728	8.80875781829267
Merged-chrX-121401228-4	20.0228983450628	-3.50686800877994	0.566884703220999	-6.1862103331668	6.16277680211518e-10	1.83061412123595e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36709533016959	1.75648227519025
Merged-chr5-107754945-4	15.1370501310224	0	1.35773256034625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155529502-4	8.00430957418714	0	1.3588822214575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81173302-4	10.1212023232059	0	1.35320984981545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60537228-4	12.5809754701418	0	1.3489369978588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29453490-4	12.0826222573254	0	1.3480784536507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96026025-4	14.5061407717483	0	1.35588741062674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79936888-3	12.1910420833236	-3.27125140300983	0.605740527365022	-5.4004169363404	6.64861908676519e-08	1.22098744911307e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13751415893475	1.85699717634292
Merged-chr10-61121932-3	6.98661205675486	0	1.35403462488729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40733453-3	11.8866008629059	-3.47224638283921	1.07669672634635	-3.22490660357247	0.0012601377134418	0.0431903064091946	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06184626282042	0
Merged-chr2-27266033-2	5.65891521316827	0	1.35714459916128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88244637-2	5.38274668104891	2.91543642298115	1.16882004992434	2.49434155682893	0.0126191050574438	0.237343992302432	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39284430389808
Merged-chr2-178506225-4	15.6230016527231	0	1.35526610729698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19526523-4	12.2264902512217	0	1.34447606358982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70214506-3	9.96571820789423	0	1.34796814785893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115745227-3	18.7134110811908	3.57308417548818	0.680899841825858	5.24759143122551	1.54100576619776e-07	2.52311844713084e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56586581096048	5.06734593332437
Merged-chr17-32576522-2	3.41391187979571	0	1.45266792772601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24387424-9	79.7407086232502	0.857263981273439	0.347988442408055	2.46348406096833	0.0137594013048661	0.251918927427152	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4931004368132	5.06953542988074
Merged-chr17-35809700-3	16.8992544174689	0	1.35108933438466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90461129-4	10.1049706668084	0	1.35977286805048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108629735-4	13.2005007118074	0	1.35101184411021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-9006331-4	14.1918964344142	0	1.33836270870557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83647802-4	12.4506048485407	0	1.34389452370018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-138389247-4	14.8404225611175	0	1.33704348920272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126625318-8	47.1810285878511	0.514617524048782	0.284383705666194	1.80958864307378	0.070359602418174	0.73410319152582	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53486711813175	5.99864534606418
Merged-chr17-17634262-8	57.5071463415928	0.245771538516907	0.217777678389431	1.12854329394318	0.259090543571267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8728314824298	6.15223434718969
Merged-chr4-66894793-3	9.26952255217808	0	1.37642427704207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32348549-4	9.88782932863212	0	1.35699832304341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80219397-8	50.0940514521136	0.165183594561485	0.310411969739242	0.532143121607859	0.594626873322428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26691629331353	5.48397824592037
Merged-chr15-41861161-4	9.32169723874786	0	1.35868042579543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24643038-8	68.9732064272881	0.0281565863172807	0.255505664451953	0.110199460265099	0.912251190313939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47340936243907	5.3063201096627
Merged-chr1-87652847-2	9.18596345712722	0	1.36829510164478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34550137-1	5.48147817066978	0.240571014497745	0.896680778121339	0.268290589435599	0.78847564932837	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85139442775557	2.56122006004787
Merged-chr1-45865930-4	11.5164976559337	0	1.34654076259841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70872295-4	13.1488320722138	0	1.36035548656166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-23675657-4	20.0669653410489	0	1.34017545817298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40477093-4	15.0804790363399	0	1.34671942291265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45420443-1	3.05097492739582	-3.25487098114641	1.40543047177501	-2.31592458432726	0.0205623867549862	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58180101474665	0
Merged-chr6-113850032-2	4.90114149942998	0	1.37036289661449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-158061717-4	13.4302533719077	0	1.34264661004932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4336492-5	34.8240703584072	0	1.34097998453587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40630276-4	9.73880353118272	-2.79278470306348	1.13069398953484	-2.46997395308735	0.0135122890366285	0.248314577329982	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38860239282551	0
Merged-chr19-11533596-4	12.2935535854735	-1.70594925242427	0.835758162722367	-2.04119962988741	0.0412309884967798	0.517974417309095	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36809407398891	0.990919527803163
Merged-chr16-85148797-8	88.5662235426687	0.766931973105232	0.235784629669579	3.25268010124319	0.00114322121928793	0.0398616820136452	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36772368346671	6.26806078874055
Merged-chr12-17881855-10	104.281152389464	0.260567199834816	0.231963408181539	1.12331165452997	0.261305155764983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78266474483475	6.03929392344077
Merged-chr15-81142350-4	12.0201888929956	0	1.35453278500921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155475177-4	9.73149317355571	0	1.34587528728581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16900970-4	10.1942485157407	0	1.34828012385636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46745694-4	8.0588706371407	0	1.34894906484988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161734969-10	76.1361659685435	0.113843046089506	0.240715740174506	0.4729356127978	0.636259116333435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6507537063558	5.81718506316141
Merged-chr16-55801817-4	11.9883941529066	0	1.3591727722227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44638845-4	17.1892141436239	0	1.35378862161096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111425466-4	11.3011893832964	0	1.34196485137498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83322154-4	10.6046066717577	0	1.36403814272822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35258251-12	112.13631977253	-0.350412711159185	0.201084270128056	-1.74261622222381	0.0814006744521597	0.802151086841983	C57BL6J_F1_Control-BALBCJ_F1_Control	7.61281341953223	7.26883538877153
Merged-chr11-68440239-4	10.0683276517273	0	1.35221081043589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48444090-3	7.58978891979827	0	1.35680562868379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78427525-4	12.4122953467394	0	1.34773552816184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98776811-4	13.5192638204102	0	1.33997693020089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34501788-4	22.0680535896489	0	1.36101469340318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12543885-4	14.0921811985503	0	1.34429983707299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64422146-3	5.75713215781731	0	1.41188708168336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8747341-4	20.3872718633787	0	1.34479433294135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36716122-7	19.7909223712946	0	1.34646556788743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151842817-4	14.0150809747283	0	1.35250971813993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122398038-2	6.389224178557	0	1.36452681128326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67041105-2	4.69616517764063	0	1.45631602242448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82041907-6	19.8822696824828	0	1.34960630368277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131672560-4	14.4199885132917	0	1.34950784549205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35327058-4	11.5691894708177	0	1.34425898028902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61021991-4	13.6752138407803	0	1.343709744204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7204275-4	10.9586341712727	0	1.35989413922942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143978641-4	8.68260694647454	0	1.39108501547708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-21517055-4	23.2993984421669	0	1.3390809191873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51089481-4	17.4110577807128	0	1.34735161083605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112433568-4	9.79364810727981	0	1.34745658549899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-98814070-3	10.0093612580182	0	1.36018679156218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115045982-1	1.65944087678724	0	1.62056376903685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76363173-4	13.5016758252456	0	1.34384201383969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11047929-1	1.84587517330643	0	1.62376610878895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72736547-1	1.77216815100563	0	1.59957413709836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37236132-4	20.258936192451	0	1.34540084325221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62850550-1	5.43247730350945	0	1.4059646681462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70324582-2	2.45290767931954	0	1.47387338081838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126155268-4	9.40012282034301	0	1.35240518789177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45640412-1	3.14953773863646	-1.17560474846812	1.3355107939937	-0.880266002907097	0.378715225211745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00619542038056	2.001525184128
Merged-chr16-30604676-4	10.0871131117362	0	1.36349487538199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50837803-1	2.56637127378865	0	1.46829093597578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126196558-1	3.0759340549965	0	1.42689868982184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129361370-1	2.69635869461247	0	1.53471210856232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70841996-4	9.66898364216509	0	1.3508161080003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107998062-4	11.5518115329202	0	1.3444262349788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70219211-1	2.83715783172175	0	1.53793620767652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58841403-2	3.12054554848607	0	1.44235048334037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91411870-4	19.8167480095155	-2.93272099311338	0.582590219156647	-5.03393448204255	4.80513958911843e-07	6.7147193553956e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03999185055606	1.99631334303834
Merged-chr7-52439431-1	4.49268635626136	-1.41344077111574	1.18109628315787	-1.19671934563765	0.231415964060177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95054544097938	2.59506697294569
Merged-chr17-31075239-19	152.425419250111	-0.115917934011984	0.171367514509255	-0.676428868936676	0.498768393351685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.49394321676538	7.36432143095242
Merged-chr16-57339626-4	8.03055985368326	0	1.37059074213678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35393630-8	42.180108917639	-0.757266156091409	0.257485232731414	-2.9410081038757	0.00327145974958964	0.0912901850759462	C57BL6J_F1_Control-BALBCJ_F1_Control	6.32051966786551	5.57563602513214
Merged-chr6-89405171-4	10.4244578889922	0	1.3490073540779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21757789-8	43.1586041382887	-0.00321779351343741	0.267985886190176	-0.0120073245616894	0.99041977132249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64855850907306	5.71858850725539
Merged-chr12-16875757-13	114.720918795808	-0.329370390395962	0.237898907590825	-1.38449727967	0.166206240485138	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.79483896811827	6.44704916554591
Merged-chr1-144242652-3	10.4334119534683	0	1.34889067348723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70468826-4	12.1093725866837	0	1.34197428607522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19214765-4	9.62092703902029	0	1.36670239661046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117295026-4	11.1393800703782	0	1.35462368259418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80160979-4	16.227107815376	0	1.34814238514001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5849258-4	15.8149310592792	0	1.33855025327293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122438150-4	10.9892500562247	0	1.34364792120688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191312785-11	104.959307008265	0.0964716770015083	0.185120248119461	0.521129795262881	0.602276356146964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.14233806510694	7.27536622821198
Merged-chr4-141767073-8	49.6794271771357	0.106818443402225	0.275033320216411	0.388383645000447	0.69773214558911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79325924033532	5.95729089744383
Merged-chr11-120800242-4	11.1430811160223	0	1.34554674680582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80483745-4	12.2736488083868	0	1.34684868228358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191288949-4	14.3800856909281	-2.32821992387948	0.750899237146611	-3.10057569471855	0.00193144840007528	0.0606887881963539	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89406295304858	1.13341594473881
Merged-chr3-144137717-2	5.00294501067881	0	1.38935273860196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5815233-4	16.9058196019364	0	1.35360716262693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86746237-2	7.13338643285666	0	1.37983578306058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75903461-2	6.40117923735897	0	1.36437865209783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38967405-2	5.04931098494723	0	1.42322712837901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41196594-4	11.3070169643345	0	1.35194308694154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19321694-8	96.2230536949182	-0.239296919775722	0.263148468241223	-0.909360869075488	0.363159670163197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8143635400141	5.53873025690862
Merged-chr8-105622602-4	11.217425631885	0	1.34575431300226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17408038-4	10.4732832063105	0	1.34832097829245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116666290-3	11.6411082976866	0	1.35198564472211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32292569-3	7.58642951993256	0	1.34647943391193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103376580-4	12.835497038277	0	1.36648013573952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-10251967-4	9.89573445044046	0	1.35688109673855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93456790-3	16.4619328712171	-3.00470611734319	0.833502135061387	-3.60491712132434	0.000312252559919929	0.0150743667004329	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67338850236547	0.67591700901439
Merged-chr4-35994181-4	11.8877059572938	0	1.35579662036238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96594104-4	10.7566291103879	0	1.34918686462824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181275507-4	9.08967736533209	0	1.35913054365211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85712797-4	14.3427596445369	0	1.3484234687406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70968339-4	10.3021522852417	0	1.3499962519867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80962409-4	11.4985560189722	1.36243529341397	1.11203992716973	1.22516760426177	0.220512077688356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.897114879832661
Merged-chr18-5142705-4	16.5022923458316	0	1.3435542271049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77954606-3	13.6499378616613	0	1.36207787283102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134461330-9	81.6222868722861	-2.04675906210307	0.21899961907344	-9.34594804667996	9.10698944472807e-21	2.91204023074102e-17	C57BL6J_F1_Control-BALBCJ_F1_Control	7.25571480212029	5.11509083536986
Merged-chr6-97818295-6	27.4854354280733	-0.740786683102	0.437937118592775	-1.69153664225214	0.0907343556017484	0.855770471805781	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03736649338667	3.02311385233254
Merged-chr12-25378262-8	83.150813726515	0.7786361937763	0.295089476531614	2.63864439670346	0.0083238243179379	0.177758418570414	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8260953672972	5.58805301103962
Merged-chr1-39615001-4	11.359143760393	0	1.35245064838699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97062297-4	12.1862688246522	-0.0106539912174518	0.72791058358182	-0.014636401032977	0.988322258534096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56706844884727	1.55926189265627
Merged-chr11-19920423-8	63.6684419724438	0.073852549019033	0.249867372228125	0.295566997645482	0.767560780155024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.55978792194774	5.63761952155939
Merged-chr6-108832418-4	10.6003045047001	0	1.35096361697386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77267223-3	11.5960783036966	0	1.36841794493372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132107190-4	13.176018633597	0	1.34325148657116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46546686-3	10.9751197015255	0	1.35718071025881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26503618-1	11.9934470988841	0	1.34641676823282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27399589-4	9.53146537734983	0	1.34284169528046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121594772-2	4.2543119312474	0	1.40594679386839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148202400-4	21.4844730795675	-0.0355164584804062	1.10835152310103	-0.0320443990378032	0.974436643750125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr9-113664607-4	13.101167890827	0	1.35919661210388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40834887-8	32.4723164624578	-0.200660475682373	0.279282447195808	-0.718485811396831	0.472457793325339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35912816371032	5.12261283099241
Merged-chr19-5723044-3	10.4763464075854	0	1.36516340247559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109548920-6	36.7989021957863	0.610992684759707	0.557344225156201	1.09625731672105	0.272966182849247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86048388135544	3.54754815341843
Merged-chr1-183978792-4	14.4924393091338	0	1.35534613103711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-153877168-4	13.1906667656158	0	1.3450745823172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50519151-7	41.5477549620888	0	1.33439216157844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74880253-6	34.9918885932275	1.71140033922543	0.691922646688465	2.47339835950763	0.0133834867787188	0.24653099213974	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.81305551035515
Merged-chr17-27914970-2	8.19760164682612	-1.77672894710513	1.0069244330502	-1.76451071082169	0.0776460336643206	0.780321823619672	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69735600200997	0.67591700901439
Merged-chr12-55648324-4	8.41671167764557	0	1.35067940806816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94574182-4	9.28575167816416	0	1.35792183701593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61257720-4	9.61989840143637	0	1.3650845319408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29468909-6	22.9611469872208	0	1.36065551574719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55714110-8	65.8817528771501	-0.159457558523886	0.30216993787615	-0.527708214935806	0.597701870621983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19901125499946	5.14225800145341
Merged-chr16-92443754-2	11.1884502829172	0	1.36370857365954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99691168-2	5.27306767060882	0	1.41839193100565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21710115-4	8.61502936764502	0	1.34705163231561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82664835-2	2.30899621180026	0	1.66008580233603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17827078-6	25.4693988576068	0	1.33538380349982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84751439-4	11.2125404586169	0	1.34560959714767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118804684-8	34.4201695032046	0.0355258557289043	0.374552475575044	0.0948488076987398	0.924434918651981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90126772848606	4.79161797042838
Merged-chr8-18564806-4	13.0223514568703	-0.430520263594572	0.670335603277117	-0.642245856388735	0.520713563110331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82425274925535	2.06239089973625
Merged-chr4-59239454-4	14.2390919528397	0	1.3532868958511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123025290-4	8.3521741436025	0	1.35136698755397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62055179-3	8.5148839537569	0	1.40012585603429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136718974-8	36.4966921819782	0.694386460888773	0.366889886522166	1.89262905955524	0.0584072164563603	0.655441345861125	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8131188606204	5.77770192601831
Merged-chr11-21564062-4	9.99023750069395	0	1.35496454543172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52862153-4	17.1871405132137	0	1.35789578732899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84843005-6	19.0840918751047	-0.139788885480724	0.641586226026855	-0.217880122437156	0.827522515094428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18210741161866	2.58132405424117
Merged-chr12-46870254-4	17.4359604085764	0	1.34377723145329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149690143-4	20.9203492325521	0	1.40254435628962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97094437-4	11.9038297974355	-0.210852077827158	0.665253636425625	-0.316949906444789	0.751281612830292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07370578505094	2.51130439439051
Merged-chr6-116131926-4	19.1800404308454	0	1.34538759204494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118468233-2	5.03185639166643	0	1.39350774793253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134606418-2	5.78279034606541	0	1.35966005090166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9878120-3	8.61813667022101	0	1.37649573485578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67823933-4	11.1137605503193	2.0667949416287	1.14325058508851	1.80782320917745	0.0706340203249094	0.735836471989604	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.94927122251658
Merged-chr2-170325411-4	13.5005403522803	0	1.36508473753082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32724641-4	13.504959024599	0	1.34111906371091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36940394-4	13.0330803622125	0	1.39477214206498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52801839-8	65.4013220209287	0.705358139486331	0.247365630070562	2.85147997029792	0.00435162277832605	0.111422450592099	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24258068540168	5.83105272439503
Merged-chr10-117906541-9	58.8244469826704	-0.0863080305943522	0.260033521399732	-0.331911171028125	0.739956334868791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60373479390072	5.55770144927923
Merged-chr13-46098805-4	14.4986684894233	-1.84220158019759	1.2543841867872	-1.46861033453868	0.141938510157472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr17-73971546-4	18.664377659055	0	1.34945455067894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36804425-4	14.4019836221147	0	1.34860201912511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12302441-4	8.84651798780084	0	1.34961270182332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27763581-4	34.5812162105059	0	1.35195047517058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144700141-4	14.9406638367475	0	1.34038789162465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120481686-3	8.72557733379215	0	1.34707848301266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125791611-8	54.3594811463641	-0.245215547311357	0.27567515911707	-0.889509044256043	0.373729564711899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2163122613714	4.95251644177339
Merged-chr15-9428046-4	19.2439407594329	0	1.34017428288351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56756607-3	9.06615899661548	0	1.35690295718606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40612272-4	16.8163169822382	-0.234154840222066	0.790540018645537	-0.296196061805008	0.767080356203503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	1.79408446835346
Merged-chr9-110781431-9	65.9023759178478	-0.521546845443809	0.269592818618022	-1.93457247161607	0.0530427808427927	0.614263426466419	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47856179022243	5.13627909374677
Merged-chr10-14959284-4	14.9119260593331	0	1.3427038265254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30617087-4	10.004977489392	0	1.34825587797222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60767158-7	31.878829490571	0	1.33588847917777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111668672-6	26.6192649507554	0	1.34072050472754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33324775-4	12.5914617043372	0	1.35163554023861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123951869-4	15.679242328071	0	1.34545832644969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141560141-8	59.5037765378898	0.00588163366444083	0.288921047253257	0.0203572350313586	0.98375839827495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.44508782701543	6.48206199820874
Merged-chr4-101721913-4	16.4766878277638	0	1.3613489117904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160250465-4	12.1518598019503	0	1.34942249119887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9419409-4	9.74447535135753	0	1.35109437051499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47736179-8	55.0899488826079	0.697678549410555	0.233894658486141	2.98287508541755	0.00285554512921814	0.0816541702678426	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67164034964849	6.40052106719975
Merged-chr2-166045182-8	51.9558924547037	-0.054887706811821	0.285415289957964	-0.192308221538884	0.847500778739133	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31946953339906	5.27921596595487
Merged-chr13-34278287-4	10.4239440812788	0	1.35949193280411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182960270-4	10.2674949843298	0	1.35062367427054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86161110-4	11.8398265201535	0	1.3578435047519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141994203-5	24.8672916207836	0	1.34489234487281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92430910-4	10.9018533581154	0	1.35188670208526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65953956-2	9.21135039989567	0.558430562658531	0.589842372100288	0.946745417203741	0.343768521314891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08674768604548	3.73359054579861
Merged-chr1-170371448-2	8.91791493253483	0	1.36377664555586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6713722-4	8.68276356388512	0	1.35838194526995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35827914-4	11.4109911515572	0	1.36182710099089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140173944-8	43.2639554001955	-0.360685099333006	0.256084544301081	-1.4084610233601	0.158994600542473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.32577041608145	5.9780659846458
Merged-chr1-91092671-4	10.8490980129648	0	1.35473925229767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130520404-4	11.2611183153689	0	1.34819278839685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48492112-6	35.4073298875643	-1.67114670585925	0.586932980084777	-2.84725302983974	0.00440982962193508	0.112488938723026	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59296178371372	2.10026576145793
Merged-chr9-106310054-8	36.6062712867879	-0.310322478473201	0.281785885612265	-1.10127048343437	0.270778953502744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50775255377038	5.26401731165508
Merged-chr3-87326237-2	10.9674765675185	1.68822992386526	0.536499243942637	3.14675172971124	0.00165095079551321	0.0533872898829878	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93739295304115	4.62750280337974
Merged-chr6-135008408-7	29.5756034614005	-0.535423548459735	0.38745585017212	-1.38189563590764	0.167003748133495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6915767658227	5.1745489318797
Merged-chr15-62321101-4	22.2353843868729	0.578321835518254	1.29475324861597	0.446665676364554	0.655116467868739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.716426531808663
Merged-chr16-58512348-2	7.86590257088807	0	1.36619254837657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25543522-4	12.1844857601523	0	1.34291061881383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34867830-4	16.7520895484902	0	1.33877225357151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17983359-4	9.97393072301505	0	1.35136889339346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99358157-4	9.7944259281421	0	1.3761221464988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110627831-4	18.0310848764645	0	1.35116023900269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20864768-4	14.2153515292065	0	1.35608518912063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123363254-2	4.86773761042153	0	1.39370074097751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113422197-1	2.13524347051067	0	1.62640858491174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67302162-1	1.50372865775926	0	1.94442713834981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101733435-2	6.39588362639721	0.643367992615439	1.06479648259913	0.604216865034154	0.545699469693865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	1.57112486727531
Merged-chr1-173848059-1	1.53603629653802	0	1.84854148787072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105273286-1	1.86419363366494	0	1.50072751076206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-49051575-4	16.0424780893862	-1.05006790996992	0.65786145461679	-1.5961839724773	0.110447724897287	0.967579029442647	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01206875777999	1.45526469271556
Merged-chr11-85953168-2	3.27962409825932	0	1.46865173660998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90068085-4	23.5879320226022	3.38818415629264	1.06185775513379	3.1908079400576	0.00141875558664907	0.047314193211446	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.07771909425719
Merged-chr10-43752243-4	10.4405337567419	0	1.34445260499818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32709607-4	10.3227577877995	0	1.36272526489709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124904286-4	13.4379221778334	0	1.33950409857223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59294825-4	15.2133297981563	0	1.34560542654138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68799116-2	4.21222133143583	0	1.40152965193859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91456052-4	11.7182177537311	0	1.34340118900835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88102614-1	5.39520566879206	0	1.39797463840897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97412681-1	2.19261568451903	0	1.52818491294082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128535985-4	21.9930532432573	0	1.33814435915287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20801764-4	11.7544338867314	0	1.34776722581616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121743782-4	13.1676274292929	0	1.36174641972482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79389492-1	3.25492619842606	0	1.43010045028021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84146028-4	15.5902185814859	0	1.36110920683464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30635442-6	23.1170915437022	-0.752151610494906	0.645100854193771	-1.1659442172572	0.243636999821551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58111491336869	1.60650301571838
Merged-chr12-84614246-4	10.9943832080102	0	1.34726741718518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108726617-4	10.798827968522	0	1.34644799999008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51678478-4	9.75290256947494	0	1.34680936602992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27356326-4	12.396107674156	0	1.35280431313562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87716561-4	14.5052088109448	0	1.3512301292967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97479018-6	70.1461016167715	0.490871880795151	0.242574516709574	2.02359212110832	0.0430121363818091	0.531990152805179	C57BL6J_F1_Control-BALBCJ_F1_Control	5.95920811929856	6.47293708333881
Merged-chr18-60638407-4	19.4458715398119	0	1.34888438899852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59888218-8	35.0557629569168	0.144408595411122	0.299094022773346	0.482820064647546	0.629223502829998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94017767551212	5.06141700430789
Merged-chr2-69856584-2	8.16426449536664	0	1.36126086936575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99632781-4	16.1727484103489	0	1.34138696687578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3929382-4	17.3635238829378	0	1.34268971751501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19980001-4	20.2733738852069	0	1.35099137137352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24797781-4	7.9515017612765	0	1.41737003182298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122258713-4	9.44569798279645	0	1.36109420716967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5888358-6	29.2261411109377	0	1.33646679207466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140721030-3	6.19224393993977	0	1.37733831334389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43089707-8	70.4801176277575	-0.276353987962284	0.239806267346831	-1.15240519365824	0.249154607782329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.1844406346822	6.91587469253737
Merged-chrX-52560190-4	8.03804846598348	0	1.34644119513873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22752701-4	15.9148195141688	0	1.33982246633365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5445581-4	9.01208612878628	0	1.34916114658676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33921664-4	8.66314839217509	0	1.35420959263769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30811071-4	15.1759843442561	0	1.35429428641573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135537487-4	12.1469592125837	0	1.34158151940417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123962676-4	17.3579016463687	0	1.34346093786359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75434646-6	52.5268450808993	0.00349940612419673	0.317541061736828	0.0110203263321484	0.991207229741726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95174629304493	4.88327833878066
Merged-chr5-90271398-4	12.4671812553095	1.77887706777696	1.26551307849568	1.40565680276613	0.159826059960923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr3-121370597-4	11.2084790458591	0	1.34373548266657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138083319-7	35.2159266203693	1.27880787288481	0.380617506252494	3.35982410655718	0.000779921103202088	0.0295852974521719	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06398610100787	5.42153646238992
Merged-chr8-35698383-1	3.35676234252168	2.43644303830897	1.31946422407538	1.84653967409864	0.0648138842600992	0.699328688863583	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18909650862134
Merged-chr16-91376876-1	3.65024117416764	0	1.40927163363983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103982442-4	11.2703703937714	0	1.35707183863543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119164338-3	8.68795261935086	0	1.40093451168503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17842268-4	14.49035324948	0	1.33737739487205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85985759-4	10.8437059133237	0	1.34596603014183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142023389-4	9.33490214603483	0	1.34562834130395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73606959-4	10.8480050265738	0	1.35351873445882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38143302-4	13.8813483693428	0	1.34924906158193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61533816-4	15.340946798717	0	1.34360908198362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40727709-2	4.79229395102055	0	1.38655656589829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-118128192-2	6.93638987142293	0	1.37347339245677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67442563-4	10.1768399688061	-0.0338805416275372	1.30052756656329	-0.0260513829146031	0.979216354699988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr8-104116624-5	21.3929292875466	0	1.35486446713271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173018794-6	27.0791415217383	0.350086538750178	0.44480070795181	0.787063807434648	0.431244514821055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88285023239858	3.80012712703882
Merged-chr15-97162463-4	10.5279224932436	0	1.35028172376952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160361679-4	16.5191287611372	0	1.35189248262715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59902458-6	25.8835279982971	0	1.34652960921903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24007602-8	73.8060315658121	-0.253026283288464	0.296946052261222	-0.852095124221008	0.394161297938196	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28909467317833	5.09813167349553
Merged-chr13-37857979-5	40.4724214607915	0	1.33563026111805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103393783-4	16.7135324017537	0	1.35297303838148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34620463-8	60.3537807957119	-1.25742317275649	0.284432349109819	-4.42081632659513	9.83287278475533e-06	0.00087337439821326	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41127833839478	4.97025371059124
Merged-chr6-128764247-7	60.4740461512773	-0.00877421103542126	0.313300153491803	-0.0280057667946556	0.977657551715183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18311336093896	5.23918880338246
Merged-chr13-58688439-2	8.19190134452658	1.50795233246813	0.879645456450368	1.7142728600602	0.0864786251228969	0.83099029897721	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.73556682010248
Merged-chr13-26234925-4	9.2889505525081	0	1.35130467976181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123138315-4	13.7052025921345	0	1.36215665650352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77626659-4	11.2435604283511	0	1.38785762067025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59328006-4	8.87750730369009	0	1.35077868541851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5837716-4	14.3424857297837	0	1.3383830340068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101256168-6	24.7472703154539	-0.169747927723885	0.361114706778657	-0.470066503904341	0.63830750454999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21109535521538	5.09080878909724
Merged-chr13-114964440-4	8.24390928490084	0	1.35803557756797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6477290-3	13.5983567018128	0	1.39390434330063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45005326-2	2.31513916679306	0	1.51141555500455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60852085-4	14.5155321251448	0	1.35274004568943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75829174-4	15.7922285602928	0	1.356906927179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109156055-2	3.26560706534121	0	1.4455527191826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16884134-4	11.5215878166101	0	1.34328279629856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111432304-4	16.3771677282171	0	1.36386653928254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108327797-8	33.8508250700551	0.115854797409885	0.317374060193162	0.365041797490862	0.715080206035934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2026472811154	4.59542711503346
Merged-chr8-126828220-6	39.1297480121885	-0.0145555856799907	0.50936912889911	-0.0285757122962072	0.977202982952228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66036991031164	2.99924047502289
Merged-chr5-135913416-4	8.95960213564159	0	1.35434131363082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69524219-1	6.41257853803657	0.266650260766779	0.894084724899764	0.298238246712775	0.765521332586978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47092068604539	3.24025651188993
Merged-chr2-38481418-6	22.8927515527649	0	1.33706639241325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107417430-4	8.9171605655425	0	1.34412226995575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17581391-7	43.9356404545888	0.0893434670046761	0.256234525092039	0.348678488867119	0.727330695348088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61226369262454	5.68740518383821
Merged-chr13-58478617-4	12.817743335889	0	1.36694440594154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16671238-4	10.9829432221756	0	1.36899264059436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86888693-8	48.6370602386107	0.0597355758782939	0.260728128774276	0.229110591784324	0.818782961350489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76169814024367	5.83745188632359
Merged-chr4-150594019-3	8.10201286758372	0	1.35936825938567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122264447-4	15.0336492056547	0	1.34621130010325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158179155-4	13.7566087394582	0	1.3602689817743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86151111-8	56.7720589030495	-0.543254592972923	0.287144132624913	-1.89192301443456	0.0585012389028888	0.655908101470409	C57BL6J_F1_Control-BALBCJ_F1_Control	5.7242179423856	5.17107931090367
Merged-chr14-22813492-4	9.7419992386301	0	1.35165479986251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150013946-9	37.9824112044441	0.218929366633607	0.353573200459044	0.619191065242986	0.535790497150966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64130082813507	4.37498841655922
Merged-chr8-115420432-8	19.3937110068544	0	1.34333442410857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99571173-4	8.70290283821989	0	1.35154633772421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37854602-4	12.3487879761446	0	1.34759119943336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57433016-4	11.9824369754458	0.866182647309441	0.888098816403874	0.975322375517651	0.329400374762488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.38950137562363
Merged-chr3-121602210-4	16.6839205917341	0	1.35137083749633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78397105-4	11.2330340274417	0	1.35447729634166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15919632-1	5.0188872014186	1.18409043394532	1.25660908106768	0.942290209250487	0.346044079428164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.14143228603163
Merged-chr16-49165955-4	14.0263224417532	0	1.36294579762526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149357298-4	16.0732973594711	0	1.34420448759077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97082252-3	8.34081873221943	0	1.36109012214238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25436408-4	9.33017808968595	0	1.37058745629195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51927351-4	26.734759589442	0	1.35169006858301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80196324-8	69.7528737097576	0.185892505011447	0.2327009148103	0.798847332263338	0.42437894124368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.94302697630748	6.10428268683107
Merged-chr6-38913101-4	18.6221469784809	0	1.36039162345005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50763323-4	8.76092252144842	0	1.37788330709753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28430701-4	15.2393043454439	0	1.34385433179195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80057668-3	8.25509683577429	0	1.36323270144859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14873939-4	12.9463729160371	0	1.35722957763997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49939129-4	22.7169145577081	0	1.37327153572539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82570200-4	12.2282906224164	0	1.34089824395645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105426164-4	8.63159363857496	0	1.35051646823495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-4922815-4	11.3885453804239	0	1.3464742828779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-139110238-2	5.78707842624059	0	1.36713204644241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95001857-4	10.0310726475611	0	1.34633978939483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-117770146-3	14.8378593305916	-1.32312262403961	0.925241288445416	-1.43002981012954	0.152708463477353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	0.723581231604105
Merged-chr13-95038441-4	13.0419935378333	0	1.35910429925187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122870076-4	14.1576578430929	0	1.34444138634365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59042878-4	10.0110145432671	0	1.35320302812155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24441982-7	29.491503334662	1.12599781663709	0.388394105590609	2.89911149636231	0.00374221793206526	0.100109854610795	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65809024895148	4.69262618032358
Merged-chr13-111805241-7	37.8112632001168	0	1.33460335940461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102424875-4	12.9292140580052	0	1.3665347062214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17770772-4	10.8284025753229	0	1.3488459304485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148986149-4	11.2212887162395	0	1.35600319796209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132035395-4	12.7450392522459	1.06567898990586	1.00496525566481	1.06041376445486	0.28895640290983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.20253745507858
Merged-chr13-55024431-4	12.1779182209049	0	1.35038501835096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45372719-1	5.64122953922181	1.82283082260296	1.31339641185951	1.38787559197165	0.165174931418362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr17-57344165-4	8.74292459403982	0	1.34970595992329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31232984-4	14.7351303361291	0	1.36103844873479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3706401-2	5.36345555229482	0	1.39348201335517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23702889-2	10.8720791214393	-1.20385851103877	0.534380654867897	-2.25281080082582	0.0242710808924504	0.367098410192741	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26050659930734	2.63328746592141
Merged-chr6-30229144-2	6.21737676939109	0	1.39201923594338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108528183-4	15.2606136318578	0	1.35428862081943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98833176-4	10.9121551170698	0	1.3453157087006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-51030367-4	9.59196445462573	0	1.35207921540939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129175841-4	12.6892519805246	0	1.35197865174069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71087119-3	10.441317650546	1.78139643466742	0.561805316719648	3.17084296223627	0.0015199728877748	0.0499633978401033	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17543988140679	4.35306574073561
Merged-chr17-50666497-4	38.9306378999131	-0.969029313799	0.477064795862927	-2.03123207204211	0.0422314583863198	0.526160273342242	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8734437918504	3.82650468090813
Merged-chr5-54019714-4	12.388163436616	0	1.34845049683129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144980939-2	10.1632574252292	0	1.36569015122601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60070890-2	7.35199723699145	0	1.36295947903753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99130799-4	19.7062417719577	0	1.35160410167847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180922511-4	11.1229338767894	0	1.34542077422929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139236244-8	77.2220560989316	1.75864539579894	0.267712836358855	6.56914856873568	5.06037753380232e-11	2.06824858917264e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84009954100174	6.69706259497527
Merged-chr8-46844802-4	10.2312654606327	0	1.34315846225151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136716278-7	29.8700356543857	0.944604072947972	0.435133628125069	2.17083675425901	0.0299435145498057	0.42277785683188	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83380858812872	4.93206938062632
Merged-chr3-69674377-8	41.7742479291671	0.401151295856211	0.268333109556701	1.49497502011187	0.134920961565105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3367375353198	5.80801886324104
Merged-chr10-44553847-4	12.1242674731967	0	1.35194256757665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25022270-3	11.5667108046909	0	1.34889515645616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64317680-2	4.78701720269957	0	1.37469686736646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28525926-2	3.70980519509305	0	1.45162103039069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115375663-7	26.8171991030976	0	1.33636047125673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30198486-1	2.27952936115216	0	1.58304160386033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111422806-4	11.341642367263	0	1.35208906579119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55002599-1	4.40592605950253	0.163318439903271	1.00844401307725	0.161950924181608	0.871344500401626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56155645697149	2.88440387029755
Merged-chr2-11464944-1	2.19019363843504	0	1.58838115519431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22824014-1	2.29958005283	0	1.47546434517836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120318466-2	5.67434238908515	0	1.38686816378656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29434180-2	2.79189895217898	0	1.4344785432444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136016447-2	3.34441299325275	1.48549854876028	1.3622836965734	1.09044727797654	0.27551616545682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.948471875794396
Merged-chr6-54048956-4	11.2156351572445	0	1.35335027145137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156680439-2	6.66515032502655	0.316504098423607	0.963700212942847	0.328425888230428	0.742589671585034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34557707159302	1.51226750748471
Merged-chr14-120757079-1	2.38653138479239	0	1.50306982799346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85398945-3	24.5588019578688	0.311112953288007	0.636874025520469	0.488499987157991	0.625195734815736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2547128493771	1.87547555837002
Merged-chr4-95230735-8	51.2201380616377	0.0683286771594715	0.315239072625302	0.216751929227656	0.828401676207043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3748299021085	5.45409055749267
Merged-chr12-100170479-4	8.46757303186417	0	1.3501321849999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17335040-7	57.7693337882473	1.68837084133707	0.316821374622807	5.32909385721582	9.87039816080438e-08	1.69792713171888e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91615846087122	6.64810982792007
Merged-chr2-71843502-8	51.5890580689595	0.976410861274277	0.262388279774454	3.72124418862606	0.000198243623631345	0.0103288688453829	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24910612979959	6.26023948252759
Merged-chr16-55863566-4	10.1492393818852	0	1.34280835186207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80272084-4	14.6237635101726	0	1.35242800402257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105866881-3	18.8341621032398	0	1.36117731013229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88022992-4	9.62004602167218	0	1.34294359538585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136311141-4	19.9359975605512	1.20662526283996	0.792525498205848	1.52250655098362	0.12788220521389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	2.44800645601486
Merged-chr1-36073804-3	7.5799286302512	0	1.37347103594188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140888927-3	7.75503124686953	0	1.35486393003296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121995011-9	99.683139990502	0.397841998340042	0.189577158990091	2.09857559032645	0.0358543299937805	0.474788191018737	C57BL6J_F1_Control-BALBCJ_F1_Control	6.65134646193976	7.05263595866288
Merged-chr13-5778372-4	17.1193543639054	0	1.3409254787774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11430972-4	14.2862422616195	0	1.34969488831091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87547037-5	16.8813332648101	0	1.33971446671577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-98016995-4	18.7410820404488	0	1.34045601910294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32565074-1	4.47810996655737	-0.952944074603624	1.02874577868454	-0.926316388702133	0.354281581369135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18988090107364	0.815004392037195
Merged-chr6-71446395-7	40.0758062380691	0	1.3416656827416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11540337-4	9.44897115588071	1.77032902668515	1.25063341011111	1.41554592446709	0.15690849336315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr15-96593276-4	11.4339515079319	0	1.36609035209612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164492966-8	42.3572928436893	-0.0945816558049973	0.274200648072386	-0.344935930931968	0.730142537478669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15759179513099	5.0287611836839
Merged-chr17-28432223-4	9.49493917153712	0	1.3605508426532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17726542-4	8.85011575401839	0	1.35463494808024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68519977-3	8.00193480601291	0	1.37816058561156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149083672-3	11.6502330862086	0	1.35225769413623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33289582-4	18.5708862100336	0	1.33898724845219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37370557-4	9.63609539385328	0	1.35374544832832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128381426-4	12.6602860683289	0	1.38471354089258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99215420-4	13.1035833387493	0	1.35867897396027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-46107537-4	10.7647351941419	0	1.35260743896194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64747703-4	14.0440263280296	0	1.34954191801759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123755478-4	18.9716161831945	0.316612431343729	0.550845592608522	0.574775282932581	0.565443285193233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45023979605624	3.35150576105392
Merged-chr7-100856437-4	8.56253568615159	0	1.35925774360886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149763530-7	35.9345897252587	0.444050398844579	0.288541508486826	1.53894807431095	0.123816973402204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18998655276403	5.64303578839354
Merged-chr17-33564786-8	34.4908033830491	-0.0764531358744226	0.373069854103318	-0.20492981417161	0.837626961181051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78316274776008	4.34972529951468
Merged-chr5-118413577-4	10.747474626349	1.0886579628192	0.895630328588742	1.2155215473047	0.224167235717276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	1.94207584056134
Merged-chr1-154006254-4	12.4951859041172	0	1.34461840444623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111470581-4	10.0038804034136	0	1.34905506344292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109469673-1	5.20176741955214	0.60659396674811	0.853279863252673	0.710896849757822	0.477148158303739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57074540165941	2.46284082507861
Merged-chr17-7897957-4	11.2154593742044	0	1.34414343388985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16932345-4	16.2008093056547	0	1.35196215828637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142698324-4	9.86351225447321	0	1.34400008834129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73589306-2	6.23849802819815	0	1.39558292229524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70805095-8	47.7462961693181	0.883183215444406	0.31893349286716	2.76917675689917	0.00561981377495403	0.134754061311304	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62666894387138	5.57757281069208
Merged-chr5-121586623-4	14.6216643498271	0	1.34099943781187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34235141-8	50.2904286248856	0.997525145339661	0.229433954663308	4.34776599132207	1.37531227238753e-05	0.00113964328985844	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73850724049474	6.75028325336232
Merged-chr12-86906543-4	9.0154214276137	0	1.35337973954189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162574769-4	12.2254905045461	-0.670016823662723	0.791670424525744	-0.846333023068408	0.397366990586059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	0.788686275880602
Merged-chr9-45272368-4	16.6584854093552	0	1.34996219286147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12833832-8	61.0657151967297	-0.31582922322218	0.259171537499109	-1.21861075591013	0.222991964700725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.85508425198305	5.57859396585845
Merged-chr4-123928117-8	68.638238777049	0.591690941037349	0.271487348019624	2.17944204528669	0.0292988455641942	0.417320153770958	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12496222044383	5.66776430279393
Merged-chr13-40844294-4	8.79895326195594	0	1.35616417064376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149955687-4	10.7051612498713	0	1.35090638847269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89267296-4	23.9861346653326	0	1.34307083791421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-58382134-4	15.7247459202301	0	1.36230681952938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64627521-5	15.8267801714374	0.379491497109684	0.773195469394086	0.490809261217053	0.623561359162535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	2.34871576270704
Merged-chr1-58734712-2	3.71925926076366	0	1.41824193741116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22658718-4	9.1799764212239	0	1.35013529883152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12648355-4	13.8612308117103	0	1.35151570511466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117418625-2	5.61130579397841	0	1.35650820840556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131108775-2	5.78922139580505	-1.37667235177905	0.979081067893958	-1.40608617296659	0.159698537715971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	1.02674429890598
Merged-chr5-88688138-2	3.57118426949126	0	1.47423194420778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140842155-6	39.345794042515	-0.883018000945017	0.321200688673373	-2.74911615100225	0.005975620691482	0.140436128477419	C57BL6J_F1_Control-BALBCJ_F1_Control	6.45428564205003	5.52514596289452
Merged-chr15-36334596-3	10.5745801999472	0	1.36781705703217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90701568-2	2.8015013646705	0	1.59118368546041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38397038-4	12.0408108225329	0	1.37618822325796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27937150-2	9.35140020185739	0	1.37564832610923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122662742-4	11.1089511251867	0	1.34696734643878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56727353-4	10.7701222861059	0	1.34753094287082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-42142862-4	9.00229521586505	0	1.34619582909817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99100925-4	9.33977327342991	0	1.35584100650726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64278946-4	12.5791968303706	0	1.34388659010875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87664038-8	53.671233074028	-0.155610892768518	0.257134369964014	-0.605173446048057	0.545063757464639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.25327941185107	6.05222741090613
Merged-chr12-31060399-2	6.6092206158319	2.51621128820506	0.959983909145435	2.62109735823068	0.00876472277610892	0.184381410753291	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.18502937059779
Merged-chr5-64391608-8	64.8258361037003	-0.211488832281357	0.247638611714242	-0.854022039686609	0.393092777788869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.53406589917417	6.36914379770617
Merged-chr8-40961924-8	40.3010841442125	-0.326487896322092	0.271317095427979	-1.20334435914215	0.228843089861963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29455633078661	5.92712377640238
Merged-chr14-45038192-4	13.2282400746592	0	1.36173904216166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43481406-2	7.1238693227431	0	1.40420060841308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57472400-2	7.12253699070372	0	1.35749765266373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94464965-4	9.63158346060886	0	1.34598285517209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70475389-4	17.304592999257	0	1.34538797673385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83536661-4	15.6774177432813	0	1.3499996128126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-24298434-4	17.5735574086829	0	1.35314758895408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149355334-3	7.79322852941266	0	1.36484166397185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60705331-4	12.7178881439347	0	1.34030897319707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63498698-4	12.5706189267764	0	1.35747303702748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35459993-4	15.2476428959638	1.00556897605483	0.849284457492399	1.18401904942883	0.23640552218254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47190689055611	2.0587585364566
Merged-chr10-88574204-6	20.0607014347597	0	1.34310558676503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95848087-5	30.6222704011776	1.43955375587864	0.466296759151101	3.08720514914015	0.00202048103635646	0.0628325678806069	C57BL6J_F1_Control-BALBCJ_F1_Control	3.348255802097	4.74197306440896
Merged-chr1-36927781-4	9.99406655697348	0	1.34826173580262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93251962-8	43.73226416538	0.0153189419810167	0.257735332668996	0.0594367168148049	0.952604268950816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38786137540701	5.36732551414595
Merged-chr19-34520370-4	16.3262666014622	0	1.34190865003642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152774770-2	6.39759218338979	0	1.36674277763403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128913819-4	15.2070201382075	0	1.35412678346268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52763268-4	14.1235691904179	0	1.34179095604021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132945554-11	56.1380007979547	0.317132695949566	0.296154415240281	1.07083561692729	0.284243349072188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.1238296285494	6.42715190483115
Merged-chr1-127278545-3	8.53204247027572	0	1.35104382485009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60757460-4	9.83419166587558	0	1.36854911265421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20433379-3	13.4105981140809	-0.546779529944563	1.21873656736561	-0.448644559116224	0.653688084371599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.601513806634888
Merged-chr16-91793763-4	13.6076882415621	0	1.3416112199259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61202038-4	22.2805087111318	0	1.35691209964421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84924305-4	16.9430875643246	0	1.34320821108777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90251252-4	17.0592175619431	0	1.35041890396555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99331707-2	10.0519589621303	0.610542814276632	0.630213793267195	0.968786816155541	0.33265156585387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30406722002565	3.12428017203678
Merged-chr11-32647426-6	27.8616838652564	-0.596340906914235	0.398180692410852	-1.4976640461987	0.134220557569235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21388118325651	3.6022603223149
Merged-chr17-88337912-9	62.4420181469596	0.0775655488074772	0.2403436159332	0.322727726743678	0.746901451903363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48782432786941	5.50013437417011
Merged-chr6-125367792-8	90.068678392043	0.393262931797447	0.268953347151311	1.46219757427373	0.143687076178397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08905996088655	5.46998385149419
Merged-chr2-18975458-3	6.70929737323148	0	1.41495779740973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4299772-4	9.96205755997332	0	1.3462827165976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161998942-4	17.0505291034561	-0.616891690085453	0.695211301408558	-0.887344162610098	0.374893635758828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67800608098903	1.86501351763573
Merged-chr2-163575544-4	15.7139483968333	0	1.33831291594567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38338153-4	15.9577765451257	0	1.34602377437616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83832334-4	18.3557513677623	0	1.35037034220022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12083459-4	11.7283560688113	0	1.34592356994824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44773827-4	11.6147033490421	0	1.3461581615919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17583651-7	35.8843089514459	-0.236291162350482	0.447140073923271	-0.528449978274659	0.5971870569122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47124214672555	3.5300132103584
Merged-chr8-105384419-4	10.3432101948729	0	1.35471501828133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37833698-4	12.9889474043505	0	1.35558019590443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121877462-4	18.5443526065144	3.74914782130914	0.643498463531737	5.82619545155174	5.67052015556342e-09	1.39476834903291e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9094343094868	5.48325550401961
Merged-chr16-94625922-2	8.67188972242701	0	1.36201897828227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66093667-3	10.958999725467	0	1.34851315558571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95823988-1	7.82010466577235	0	1.35971371613792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63104169-5	34.5977913899298	0	1.33510944504161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148542401-4	18.6792366660411	0	1.34685611916135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15657471-3	23.3019720376833	0	1.34220154361822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59363265-8	46.388704810931	0.240851402526395	0.279626245904923	0.861333319220285	0.389054489728155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65090190495258	5.0419155478042
Merged-chr9-20892204-4	25.0042849830486	0	1.34511389976609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40404245-1	2.62456557446198	0.568442556803689	1.12986265719493	0.503107659310504	0.61488858195215	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40684701627341	1.73709028346892
Merged-chr5-54060213-2	4.81182495826799	0	1.36804715593538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90874564-1	1.77954651194052	0	1.64997684213716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12090376-3	8.99077923346775	0	1.37052518550051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-140464215-2	2.7892894663032	0	1.5666106529513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65900881-1	4.56454397603298	0	1.41932416125328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63930293-4	10.8849004830327	0	1.3561671975479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34792154-3	7.68337366869401	0	1.35520472775303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138118944-8	55.4071643173907	-0.309497022476569	0.34912284940828	-0.88649890146442	0.375348745858399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62219580808098	4.66271587850233
Merged-chr11-48853837-7	29.5897628330361	0	1.33427729443647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18989052-4	15.1941861071826	0	1.355922727513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39785547-7	19.842513427862	0	1.34172887640946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32199617-4	11.3250481512541	0	1.34576926296604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26550014-4	16.3395609608842	0	1.35053804180752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38473465-4	23.5102815697387	0	1.34130454652473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26513312-6	30.789268624082	-0.150404500796999	0.398854363814124	-0.377091275519028	0.706105774575585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30413093287805	4.11483493636712
Merged-chr5-102056141-3	11.9677718002756	0	1.34385089035849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84328662-3	12.3344442505568	0	1.39596050918221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20232212-4	12.8247639113954	0	1.34847930524115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139761428-5	25.9387759005135	2.23456530693088	0.489146701473361	4.56829270278248	4.91713048453348e-06	0.000492904563075948	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85322399374351	5.18332167592151
Merged-chr6-24159983-2	3.54649081938237	0	1.42166251732198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117210544-4	11.1325536729858	0	1.36036472332463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171471084-3	20.0350441081007	1.26133624201602	0.601209865772822	2.09799657960476	0.0359054475213005	0.475048185666689	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75520908275751	3.55750549638976
Merged-chr5-115072302-3	8.48384186840187	0	1.37382599647555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99187009-4	17.5850344336939	0	1.38045236159414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96712220-3	10.3479835467568	0	1.3740747758309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16404573-4	12.5740662756445	0	1.3586709151845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19972651-4	11.9668065667802	0	1.34940030062821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38569473-4	26.1507207757912	-1.6185152928845	0.676488975377641	-2.39252279311868	0.0167329887276085	0.286484577714668	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2748292160886	1.74544410475497
Merged-chr1-172566478-6	58.2407825978031	3.66627795315777	0.524576196472732	6.98902843440086	2.76796324779936e-12	1.44676648256851e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	6.05588263501495
Merged-chr13-40971421-4	19.5066931706262	0	1.34914031885744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30088649-3	15.6432323414493	0	1.34325264796402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134595232-4	19.1965700424103	0	1.34723699444561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86949333-4	15.1359871605374	0	1.34893698284408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60269007-4	19.255005056453	0	1.33689151997915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12761320-4	9.51632520146729	0	1.35569602604115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140992483-4	10.6495054444953	0	1.35585065834211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184853456-4	11.2769118558194	0	1.34974778606543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122378017-8	61.6174049346861	-0.00327756180715419	0.297321141807755	-0.0110236419355386	0.991204584433658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34214460746588	5.18673081092953
Merged-chr2-155367823-7	47.6521755805424	1.5289771266623	0.268980046226083	5.68435149043421	1.31309969184598e-08	2.91341984281861e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14213354032513	6.69451069039224
Merged-chr11-8847827-4	15.1136732088049	0	1.35555707772447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110541727-10	72.9666437028605	0.235016489764689	0.332681409916692	0.706431086196071	0.47992009469484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51983455130222	4.7373865612198
Merged-chr2-79056289-4	16.0552936665405	0	1.344320048768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31785225-4	10.4750929514367	0	1.34479832422332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121423913-3	10.3201592964041	1.58981588028783	0.765277533241011	2.07743702282077	0.0377612421198563	0.489545280322745	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08307023099066	3.54371718558473
Merged-chr1-39916340-4	18.4252303103671	0	1.35103575348904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29111526-4	21.1213930669006	-3.10896517785467	0.530085134478499	-5.86502992752907	4.49051696162108e-09	1.11972482347138e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70486624808483	2.19790030280897
Merged-chr5-81037319-4	12.6274474609911	-0.0359448959245013	1.34303844696918	-0.0267638622003844	0.978648076672437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr12-40277789-4	10.4561331620866	0	1.3443448567199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111930546-2	7.05729467321763	0	1.3731193751664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103551434-2	3.89647107200543	0	1.47040645587956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127258878-2	6.22007571915661	0	1.35559139133897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102033493-8	36.3089529502583	-0.0969351803189754	0.347247900487362	-0.279152675028206	0.780127660313931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66389805611602	4.478308780902
Merged-chr8-88279756-5	25.509297972986	-2.46039520604439	0.839967953626995	-2.92915366047046	0.00339886352638982	0.0935584369519526	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09247499969	0.577068348605183
Merged-chr11-115413432-8	36.8139460971952	-0.114670440128127	0.299928985761804	-0.38232530222736	0.70222008919617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12818621298791	5.00283614903436
Merged-chr14-121938816-8	64.2899699492615	-0.232749728907726	0.308231367421125	-0.755113701941078	0.450180762498288	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.44859436320303	6.19641316858122
Merged-chr14-75832202-4	10.3593286516206	0	1.3474527026299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117282309-4	14.8250258271211	0	1.34220750961378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88435879-4	13.7580266822722	0	1.34358576765984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106562961-4	10.4420110773004	0	1.35305626234612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115332566-3	10.7212284684268	0	1.37868714309203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102695535-4	11.4952913399632	0	1.34350393468173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4908909-4	14.228972843232	0	1.34935053991376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144004923-4	11.3683491871702	0	1.34649297090719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60469535-4	18.7495164395698	0	1.34662816077125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53394883-4	12.3074691596588	0	1.34699603132582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146154013-4	22.8578334251687	0	1.37298953369408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72752211-4	12.3888625913903	0	1.36732041045441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45677448-8	56.723497966488	-2.01694113770885	0.28581191165836	-7.05688271005219	1.70279231221387e-12	9.74337761048776e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.65783972394863	4.58646234336791
Merged-chr4-139242622-8	54.9291663056491	-0.0423113408076685	0.249480683839968	-0.169597662457946	0.865326561006232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.1710527517901	6.09082125833037
Merged-chr1-36133275-4	7.9228267219424	0	1.37483426912901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41555404-8	61.8895280987944	1.69028910908789	0.261076984467897	6.47429382767264	9.52563782342376e-11	3.5129448730718e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95163444056772	6.59449375360294
Merged-chr15-38653201-4	15.9343332542665	0	1.34203131891917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55227277-4	11.4070577359644	0	1.35977405434522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126147389-4	11.3485271935344	0	1.34667170826765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-105767851-4	13.3444985394895	0	1.34466818336617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15774103-3	9.7846661016818	0	1.36625947967529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93138920-3	18.8765884702759	-0.0536173725393675	0.865044534359736	-0.0619822106373431	0.950576998614204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60230598860646	1.55469575053842
Merged-chr2-4457909-3	8.24779870442159	0	1.37148141051307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84550005-4	13.2951113799327	0	1.34299045816634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134764027-4	11.1792040540578	0	1.35293868429845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41469716-4	13.934951041151	0	1.34468966560578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135536535-4	13.1710553039853	0	1.3650681819457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79618118-4	7.42836054434808	0	1.35938136533192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75884250-4	8.6161271572939	0	1.35039944898455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4256607-4	13.9402188938507	0	1.33972310304077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51398901-4	19.496264636911	0	1.34351112304535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86272945-4	9.3546125699664	0	1.36789402254635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27187055-5	27.8492174177515	0	1.33295450673147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44869607-2	5.02959971534971	0	1.4318357113308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91861518-4	12.5311707001164	0	1.37802208226706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108613316-4	10.2749272142739	0	1.35231445771335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191835021-8	33.8445855304122	0.499352141656139	0.358246225193975	1.39387970211204	0.163353934707229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59617779485076	5.03664328949708
Merged-chr16-32171511-2	8.73091957349906	0	1.35560917333631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103555234-4	9.35930324633467	0	1.34981840385583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191756735-4	13.5137351385783	0	1.34815343226597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43262912-5	28.3875013927758	0.54928014470118	0.411344631249298	1.3353283426429	0.181768906222458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62734044367009	4.23266990456431
Merged-chr10-8778088-8	63.1227476168867	0.0325954495413773	0.310775131438038	0.104884356063336	0.916467572547301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.197919304367	4.89591109028789
Merged-chr1-80659649-4	9.69240523063098	0	1.34387812468045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120519562-8	57.0838814126419	0.646520910504074	0.373175304283507	1.73248578639304	0.083187105632801	0.813742644429266	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3349558834728	4.99066305876171
Merged-chr19-12010503-4	10.328705039481	0	1.34779056789683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4616870-8	50.6893935708537	0.436857917293773	0.270699532027496	1.61381112860365	0.106568399946247	0.949041882810952	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45935866128588	5.93559296748679
Merged-chr16-76224173-6	24.660794877224	0	1.34778104457805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126643408-2	4.75582966798965	0	1.40142566657547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148530688-8	78.0844519513805	0.555692908743406	0.302689757309422	1.83584972839155	0.0663798844351456	0.709202482401048	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04514471517363	5.59564955949059
Merged-chr5-93032880-6	45.7928764832487	-1.16763622435427	0.355091679881654	-3.28826691952744	0.00100806216302816	0.036098320895947	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96794312556301	3.50238670550546
Merged-chr2-102700913-4	13.1392063713606	0	1.34228109201151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100138702-4	10.4178411113217	0	1.35354630848062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120449788-4	10.1183879020645	0	1.36564116329613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106149703-4	16.1090048880152	0	1.36137350309667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132753113-4	11.1276698418174	0	1.35263904382108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103207668-8	40.5468187260993	-0.301629620742635	0.301145608911374	-1.00160723522754	0.316533325177689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41973585875112	5.01449061025599
Merged-chr16-87737422-3	5.63952150298524	0	1.37061974624908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104124756-4	19.9227276761023	0.88084282355722	0.580713276159839	1.51682914739282	0.129309825944618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66069583796294	3.16223517408817
Merged-chr1-183266297-4	13.4766573626589	0	1.34538315824697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133335365-4	14.3015340629416	0	1.36503279489732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117033970-6	27.8017441299729	0	1.3389464827099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111004340-4	10.9553786302987	0	1.34353963327112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17732179-3	7.41487907815202	0	1.35687348097224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86817773-4	10.9334339664519	0	1.34985791614172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145741815-4	7.55410645065324	0	1.36081798171426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12919426-4	20.3026959275084	0	1.34485048800873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26586517-12	69.7413521836438	0.259944422702971	0.214643535257928	1.21105172066145	0.225875583061528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.13021344187355	6.4758480622604
Merged-chr10-105273293-7	45.4203914068233	-0.346988641683684	0.396817186616654	-0.874429468749027	0.381884414944257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.45097325178851	6.17504769842223
Merged-chr13-109288341-2	7.7062345424005	0	1.3905339785004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105259949-2	5.99603190895636	0	1.35737186266546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-98979930-4	7.53323832044226	0	1.36078523407345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111937318-4	12.0958356597927	0	1.35668767334435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104937947-4	20.1464791435432	0	1.35340039240644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76540376-4	10.163191445919	0	1.3603776285017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108197302-4	23.3144401017671	0	1.34433864731277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152805074-4	12.5583209412545	0	1.34828557975213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94341005-4	10.8332523213571	0	1.34526352257982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44382262-3	14.4406196568464	0	1.34945246997744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56222221-4	10.6987523066897	0	1.36034812773969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54578327-4	13.6866099582878	0	1.34378135698781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120870269-4	9.58035156756757	0	1.35259906217881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65503020-9	58.5549031374912	-1.08368066159028	0.234926997216697	-4.61284005001218	3.97203964732812e-06	0.000414426301706544	C57BL6J_F1_Control-BALBCJ_F1_Control	6.63459368160449	5.51248358629032
Merged-chr2-45047546-4	8.67589627291902	0	1.3713904770088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93167213-4	8.88150018782225	0	1.36625739115575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92528744-4	9.21418333899728	-0.0347067215197837	1.27673941767451	-0.027183872479632	0.978313078850331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.600815099743027
Merged-chr8-36347135-8	34.7216708180093	-0.270567123081371	0.272842206130967	-0.991661542831452	0.321362656905041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49232158620335	5.22145265667046
Merged-chr4-144986628-1	1.66270761360945	0	1.51242525932452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31392408-4	12.6900587268983	0	1.36367363856563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94648133-4	17.4674765243231	0	1.34645572499854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3080812-3	7.79947459477753	0	1.36174432479266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127213028-2	3.31703642701078	0	1.42181675209172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49905683-3	10.0907380541417	0	1.35211940225365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4648208-2	3.67052332441584	0	1.39857628159048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73617285-4	11.9439489292177	0	1.34700084751295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5722469-2	3.01364571861681	0	1.48133470173157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45616747-2	5.16177552170748	-0.559092538441581	1.3686204578805	-0.408508096764396	0.682900687417789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.600815099743027
Merged-chr4-102607767-1	4.52555639629207	-1.71892354674809	1.3423485024522	-1.28053448386016	0.200357224977102	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr19-43771652-4	12.0400054809216	0	1.342797121078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64205875-4	15.2033506117419	0	1.34594284310674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49733619-1	1.60206115499347	0	1.54788631100327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106942028-2	2.63689444889527	0	1.43380290220563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183344963-2	12.5177236456205	0	1.34845542835552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103347189-3	12.5546431293293	0	1.37098371086492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102722728-4	13.3722642781042	1.40569723432666	1.23333169065147	1.13975603236478	0.254387955978087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.990331813111976
Merged-chr4-9074593-4	19.4760320332289	0	1.35012887345135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17611739-9	47.0004673514028	0.667892496926594	0.326897746749101	2.04312358701943	0.0410402055325257	0.516293573835354	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0616972814267	4.71619120478931
Merged-chr12-73682908-4	11.1567187960407	0	1.35216131667413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77825853-8	78.3585382699443	-0.701020839997426	0.277206918645334	-2.5288720910113	0.011442972106242	0.220187086981667	C57BL6J_F1_Control-BALBCJ_F1_Control	5.55367855005904	4.84736379974172
Merged-chr19-11431361-4	11.4426602084518	0	1.35971712161218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53324460-4	11.2059242436312	0	1.34464228591273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23816321-4	11.7349863371542	0	1.34354108276142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53187376-4	13.1409984318965	-0.0440092328793865	1.10542911447439	-0.039811899562924	0.968243089274305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.67591700901439
Merged-chr9-100866217-8	40.4257257940662	-0.0148820217743591	0.300751711415637	-0.049482750087471	0.96053458379448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26410747134546	5.19623798012288
Merged-chr4-132040300-7	33.3819470690936	0	1.33438762707013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27970475-3	11.3494394009875	0	1.4221526447879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43703273-7	23.4295588270313	0	1.34737702786829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34789200-8	46.5290478431682	0.421977408120699	0.294968338743059	1.43058543136819	0.152549065264835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6412950812187	5.18213695663851
Merged-chr8-126824857-2	8.97945991156449	0.586596904804193	1.33938941135775	0.437958445714122	0.661416406652228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.679405493272835
Merged-chr9-70650439-2	6.02379690055147	0	1.38521839703142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87442865-4	17.8273595374727	0	1.35736791455501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83709709-4	19.8013562551961	0	1.34387831948142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22749985-4	14.3337295985617	0	1.34482108780073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114362581-4	12.3694355270027	0	1.3447254945596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85346610-4	11.3938730938017	0	1.34811089543073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114079608-12	67.3491917725985	-0.00905212020657392	0.232877893804155	-0.038870671916101	0.968993499310869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70645035293918	5.7236147982518
Merged-chr1-183264447-10	50.9127608870495	0.461451265596173	0.35651234926962	1.29434861524864	0.195545031110875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89593062152937	4.48031007700744
Merged-chr7-83802734-8	36.5181543085043	-0.296203764742671	0.325621662913451	-0.90965620067299	0.363003849688147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61042763785197	5.42849936993047
Merged-chr8-35643937-8	47.4266452669365	-0.555651395530392	0.269718901757759	-2.06011292463824	0.0393877465749264	0.501745985259006	C57BL6J_F1_Control-BALBCJ_F1_Control	6.43228959611321	5.96670065912903
Merged-chr14-76081774-5	21.6297466896752	0	1.33997036215302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4304167-3	9.35291082081489	0	1.38174727975931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96661066-8	33.8156399315956	-0.294194394273193	0.324553874798942	-0.906457809063115	0.364693586648515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54205666126888	5.14782906811646
Merged-chr11-89024410-12	169.134224313652	-0.155043523892917	0.216269256189455	-0.716900435247699	0.473435533400762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.97832529716793	6.82374284984368
Merged-chr15-97182719-4	14.1128586505866	0	1.34627494072431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37419268-4	14.4631376146514	0	1.34594642492011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23028388-4	12.3520011188591	0	1.35335761166065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110498743-4	11.645388141035	0	1.34769577783165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58017518-4	15.0961226165362	-2.23738081612598	0.635575020159166	-3.52024661945599	0.000431145712383362	0.0193851528365982	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47206272095457	1.92763241379101
Merged-chr1-155075139-4	19.271233719466	0	1.34228827014928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142478566-4	10.6331787415373	-0.0364762295081321	0.989102471923856	-0.0368781097444675	0.970582193765842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22237730641564	1.20232890637792
Merged-chr18-61074836-8	53.5954651607015	0.994925640116158	0.307497598902867	3.23555580162574	0.00121406152562251	0.0418575535282907	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02443162731516	6.1421019473012
Merged-chr6-37213094-4	10.9832677525053	0	1.37062489412818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31119210-4	12.9691807246668	0	1.40021377170461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74632606-6	31.2546730423097	-1.66716746884486	0.42653133630291	-3.90866350710722	9.28081248000672e-05	0.00552569206572492	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89515812041152	3.36636531904449
Merged-chr13-97858053-8	42.9951120126105	-0.274092827475297	0.371561260087859	-0.73767870043956	0.460709718324428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20693675823124	5.06636697395004
Merged-chr8-14608060-6	61.6363941995749	-1.98774213364025	0.43402861948848	-4.57974899439323	4.65534278998858e-06	0.000473120327225403	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26585841090468	2.40122489545384
Merged-chr2-128058062-4	9.23005989428387	0	1.34753784775791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57970354-4	8.59790736253248	0	1.35625041265718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86495037-8	34.4307482259272	-0.538826633220441	0.292263428173844	-1.84363345283125	0.0652365773090167	0.702448094847308	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82795730312458	5.26567482926625
Merged-chr16-45174024-8	53.0701616777212	-0.362069999594317	0.281700620043585	-1.28530068389021	0.198687231295084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3379232004932	4.925397025627
Merged-chr16-91917963-4	10.8439305538926	0	1.359107383454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95906509-4	8.27940170102469	0	1.37648685192163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38371917-4	8.2959931175146	0	1.3607785449755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95151562-1	10.1703588321161	0	1.34859880835166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-18187257-4	14.9500730945782	0	1.3420320899435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145098578-4	10.8604180834018	1.18369998208189	1.1179345881641	1.05882758670683	0.289678307613814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.27743081564928
Merged-chr12-3745616-4	11.203481906281	0	1.35278447125047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52303644-2	4.65180054761288	0	1.3658098982855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139640946-5	25.5744416943117	-2.49942486702416	0.482606099954248	-5.17901631840357	2.23058959228127e-07	3.43491840359257e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90054453315146	2.03251253258455
Merged-chr13-82949793-6	29.6971642939119	0.223690991001503	0.450662611511148	0.496360215575527	0.619640289072383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43325798495756	3.74718553959048
Merged-chr1-45902111-4	11.5128163052127	0	1.34966755101571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106529236-4	11.9729956350679	0	1.36089417404457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-69656228-4	12.3604807275403	0	1.34150697384278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-133048265-4	13.8327443927763	0	1.35027020146148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13286663-4	19.7637220336748	0	1.34849504561934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119058175-4	11.2154587894967	0	1.35459958229955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101827348-5	20.6385412824875	-1.55187294167596	0.690078433085607	-2.24883559211804	0.0245229580061638	0.369366437865629	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43726270250954	1.90221032624646
Merged-chr7-102244058-8	34.3973823911431	0.294458088859357	0.294715624073434	0.999126156901636	0.317733581527416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75425362168749	4.98622496944456
Merged-chr3-142590560-6	42.7907043172198	-0.67992030621935	0.481312981729462	-1.41263654218561	0.157762618791889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63867035509972	2.49683641881066
Merged-chr1-171845216-7	32.9555802242377	1.74913934291685	0.402661422465296	4.34394567080137	1.39946139049738e-05	0.00115612950951439	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09538491816753	4.94014458015437
Merged-chr4-150789343-4	10.026228505817	0	1.35286711734747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58563313-4	18.0691873898408	0	1.34023006375595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155278637-4	8.25368776015538	0	1.36117184026977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71102663-4	12.5687443411944	0	1.35179516859344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4572649-2	2.78657037454175	0	1.53693876683741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28867727-4	19.4731479948118	0	1.35092331487161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102834149-2	3.2221442327069	0	1.42893537259233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54813290-2	4.12292284045678	0	1.38134515487466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65378456-4	9.97220281509262	0	1.35149054023019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145303748-8	55.6461382320805	0.221240031081435	0.296055277610086	0.747292981457386	0.454886728145451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75877918775339	5.96739506441603
Merged-chr13-3779982-8	35.1774758663882	-0.198375369207651	0.365739508928031	-0.54239524132649	0.587546257167568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54321287641548	4.37093154148137
Merged-chr17-27083799-6	46.4415615894649	-1.70710471183969	0.372167352914441	-4.58692762401473	4.49816530573428e-06	0.000460481672042203	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17150329773086	3.29183177792549
Merged-chr14-18234995-4	9.0529404832246	0	1.36222256606901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78450287-4	13.2463720174132	0	1.36289123914108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127975810-4	10.0346067089047	0	1.35221948891923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56197667-4	11.5885723401504	-0.036835013921245	0.614368954704376	-0.059955851673803	0.952190796657752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77265447302712	2.73946703573547
Merged-chr1-138939872-4	15.1530103201586	0	1.36609563366516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60289656-2	5.29058682573402	0	1.38275547918161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22498153-2	5.73091134909327	0	1.40604495758691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99560527-2	4.3419052241027	0	1.37993316510127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80417320-2	5.8053321337724	-1.71644200771309	1.12719655044221	-1.52275307002998	0.127820495143162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50954942419772	0.55634759613363
Merged-chr2-30707493-3	9.76650869050301	0	1.36393237229585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9122649-4	17.1437610022362	0	1.35360544503371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20936058-4	9.86486873340417	0	1.36150102936438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7264995-3	18.3585446113621	-3.93195791317987	0.713986140440744	-5.50705075416824	3.64895084830131e-08	7.12436066356776e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11203077302922	0.730937814817307
Merged-chr10-118981705-6	51.1691062775216	0.497990650948284	0.388340999612628	1.28235404308335	0.199718477877083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69391987388201	4.51159985283089
Merged-chr10-77974537-4	8.50245598523014	0	1.3500886448122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117159546-6	25.3937487970493	0.724232226001302	0.454904651788022	1.59205280305373	0.111372840610908	0.971612300235652	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84963837514038	4.48392509502999
Merged-chr7-128312850-3	10.0227148439632	0	1.35824156092475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16582418-4	8.02682181819339	0	1.34866783613127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6490292-4	9.2896891535366	0	1.35590395612311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95675796-6	29.8060885844775	0	1.33393832147848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107389956-4	13.9179445991207	0	1.35005471097155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93999580-1	6.4390465831155	1.30689542163695	0.886945504681511	1.47347882675862	0.140621968948804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	2.29350574780863
Merged-chr4-141670398-12	78.2740804057507	-0.643080171207545	0.245595468480682	-2.61845291847528	0.00883294797468197	0.1847061916165	C57BL6J_F1_Control-BALBCJ_F1_Control	6.57595382505762	5.89535344291174
Merged-chr10-41665685-4	9.09829311070742	0	1.35158460400362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87571707-6	31.3728171152777	0.062960440762153	0.514415020848447	0.122392306232251	0.902588331439947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99448903548698	3.20277156504105
Merged-chr6-54117267-15	95.7096953529717	-0.0979424338494758	0.186471044211607	-0.525242051727511	0.599414935370829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41381547053007	6.34510517033175
Merged-chr11-80327529-4	8.40909607773895	0	1.34702449916157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102411911-4	11.0504142182615	0	1.38103917117799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69038514-6	35.1522795387328	0.0559014005099413	0.44103637737245	0.12675008996533	0.899138199455416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57058717652133	3.03384502435519
Merged-chr13-9895255-4	10.4401067157494	0	1.35163572127101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59889905-4	9.22533204910537	0	1.35110901214041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8505040-4	8.27096717379169	0	1.36985933622622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73782403-4	9.511468763713	0	1.34233026010496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74922492-4	8.70074263705837	0	1.36285293295056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76194373-4	19.447515679733	0	1.34988506563923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80065522-3	13.5005067052534	-0.595968119499884	0.558718241979849	-1.06667023684073	0.28612077165487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17799977121877	2.31110203264429
Merged-chr1-177470269-4	16.139980944932	0	1.34459628978776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134152144-4	12.8913326505328	0	1.37546126984897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23978796-6	32.0971408544995	-0.824126884806602	0.307712176992104	-2.67823942770958	0.00740102929713522	0.162813659070406	C57BL6J_F1_Control-BALBCJ_F1_Control	6.07600773898298	5.07067387118787
Merged-chr8-115632371-4	9.98398674655174	0	1.37110092421053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32857561-5	19.0453536430814	0	1.34642140911856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181540634-4	11.5153049931577	0	1.36740268609706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135406361-4	12.548074824785	0	1.3475131657689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76859444-4	7.86562279594452	0	1.35363285839323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86947753-3	11.777446597228	0	1.35927545440729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76070536-4	11.3154293669143	0	1.34670896346775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51556761-4	9.21253681253354	0	1.34893720738792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112792165-3	8.92461272721582	0	1.36936945671643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79293966-4	13.3152567615927	0	1.34426157837428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184590839-4	13.0264608588145	0	1.35151335995697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9412048-4	13.769251854542	0	1.36058682161004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38431396-4	10.8776500087223	0	1.34513428818548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64241305-9	52.814813846195	-0.154214778540902	0.30755820067837	-0.501416571565173	0.616077979480396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80449616055867	4.6134340653991
Merged-chr2-153084339-15	203.89863499337	-0.247623698785495	0.179168018404844	-1.38207533347815	0.166948571366182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.07844556627719	6.81762850007876
Merged-chr12-3823711-4	24.0552358632876	0	1.34755185092292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83903605-4	8.91621521366878	0	1.34740968628719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4569845-3	13.0814317829887	2.26812245471483	1.1128110150977	2.03819195168167	0.0415307400809793	0.520910791618959	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.78577552468569
Merged-chr4-119239427-4	14.6253645121929	0.958078739695413	0.681180801008094	1.40649698035754	0.159576600642015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53875279165684	2.34377460879188
Merged-chr7-109444023-1	2.26790919944933	0	1.47984799835696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-72143538-1	1.18631867186792	0	2.06732037697528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66340994-1	3.60515535118905	0	1.46021193042567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66519359-4	8.1553390692881	0	1.36273103314166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35728915-1	4.20786742864612	0.00165342126230692	0.961701096420565	0.00171926731544855	0.998628223828912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	1.48948003571834
Merged-chr10-28540790-1	1.82329460736182	0	1.63943410666389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35022514-4	10.4180268622492	0	1.35562123609844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37680511-4	13.60127241887	0	1.38176244355416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9084141-1	2.37558732630191	0	1.45549144252083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57953043-4	14.7807101818645	0	1.37598316663814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51985571-2	5.08347900535891	0	1.42228454573606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78815734-2	11.1619966680721	-1.62658895094796	0.821628573223674	-1.97971322317335	0.0477357618792981	0.571901329307663	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67810954354252	1.30064958020929
Merged-chr12-41197478-4	17.9351950894657	0	1.35652196866978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8509798-2	2.69728352549381	-2.07123609068458	1.65997997147228	-1.24774763929684	0.212123489222027	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0
Merged-chr2-102638335-8	34.264669755431	0.144881612763962	0.302826723914561	0.478430737192266	0.632343660881678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93398582629389	5.14037347911704
Merged-chr10-127481512-10	70.4325745121581	0.0147200128663523	0.32252116463956	0.0456404555118203	0.963596823917451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25741588263878	4.99886096901965
Merged-chr13-45109071-8	82.9155705210898	-0.109185138529015	0.276937055835965	-0.394259764910938	0.693389265445756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27336924860877	5.16419458507142
Merged-chr11-20959855-4	10.6694165758431	-0.0449035244850309	0.823737395050418	-0.0545119412507459	0.956527294994136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32643090402693	1.67023962132385
Merged-chr10-96646268-4	15.2305766867615	0	1.35262562750913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94154696-4	13.2644208857828	0	1.34742142311072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115236685-4	17.7965891198308	1.26136918475155	0.794566569794262	1.58749339917253	0.112400940777896	0.977287706293294	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	2.72055806012266
Merged-chr4-125114854-8	40.1080436341766	0.107361826346789	0.329707767964583	0.32562722743712	0.744706409503208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54488266846394	4.75286687364514
Merged-chr17-84334485-4	16.2461604524838	0	1.34554887464928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49994659-4	9.49888881708067	0	1.34571962109238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161520217-8	38.7204893837997	0.35201969187009	0.312974280361133	1.1247559750402	0.260692454847804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38852684243724	4.99366765322829
Merged-chr19-43885295-4	9.53299763800136	0	1.35333566005466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63247685-4	13.1737324844751	0	1.34191704795708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38292167-4	12.6245019228591	0	1.34328190956155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117375047-2	9.46036451358821	1.0666588373969	1.28225231952812	0.831863449301027	0.40548602493697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.878778741524029
Merged-chr17-25332502-8	55.7320446321571	-0.0511589268502588	0.276440645575192	-0.185062969824181	0.853179645673126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00785255554218	5.88307991381259
Merged-chr19-43801671-6	26.5233412728331	2.04696836060793	0.996715073671298	2.05371466197268	0.0400033166291049	0.507240561847799	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.06634306869099
Merged-chr13-80933135-4	13.1917681524587	0	1.35908527413995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40939220-4	13.4927884306271	0	1.34967993044681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113054503-2	9.170859710684	1.08482642590793	0.672341849175085	1.61350424228231	0.10663500233746	0.949068655373767	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92717768006747	3.69479204683789
Merged-chr2-102998548-4	21.082549238914	0	1.33708728712789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-166230969-4	12.6149170536946	0	1.34327431361767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149247284-4	18.4869351730957	0	1.33932841507538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8793442-4	13.0103010968575	0.0861966479364577	0.631271902988825	0.136544407454776	0.891390921190618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89928934249206	2.84413604420567
Merged-chr19-34148646-4	9.0760254524344	0	1.34558970017125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25474172-4	13.7044151983636	0	1.36720555818365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13867601-4	24.544307951365	0	1.34920580111434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43576536-4	12.4969685246266	-0.270468910843795	0.684741285245984	-0.394994309050071	0.692847087930278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08706762733164	1.86774501229157
Merged-chr18-12141518-4	8.82554833857443	0	1.3532837902921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29414678-4	8.8188515919141	0	1.35283102284488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26697458-7	34.5831560877232	0.733805935095835	0.298042273507574	2.46208675856577	0.0138131248774729	0.252647259493455	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63227101887596	5.29478431630874
Merged-chr3-89295726-7	20.1560649991613	0	1.33635312541022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157071746-2	4.18075570810241	0	1.38061265637605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29864474-4	11.1206707937331	0	1.34230726294652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95817584-4	16.9303657107295	0	1.3448878273235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120156030-4	8.51596368042822	0	1.34753073385731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151040531-4	12.0105554962812	0	1.34649953280571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177131699-4	11.1374427139651	0	1.34228011490053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102658642-3	12.1801204301694	3.79859751908541	1.08309692234144	3.50716306244654	0.000452911519276397	0.0199998515648624	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.15002376528672
Merged-chr2-38950592-4	16.9001784322136	0	1.35762876669163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43854313-4	10.0244153046071	0	1.34498037760809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89351262-8	43.6172522534272	-0.320155299115318	0.358841243622759	-0.892192034235311	0.372290011090556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61170786081057	5.33496688937744
Merged-chr18-5680331-4	11.6214242994513	0.626456740912689	1.34159685998187	0.466948574194752	0.640536671389483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr6-135007802-8	54.2704384894492	-0.549719740131268	0.2369758986097	-2.31972847600278	0.0203555703808216	0.324204058110483	C57BL6J_F1_Control-BALBCJ_F1_Control	6.81573850669905	6.27276228965745
Merged-chr7-117470282-4	9.47293719868365	0	1.34470020042588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9597577-1	3.04010018787997	0	1.3931749173555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26585564-1	4.94142345000255	0.156995608271272	0.981067909910475	0.160025220155859	0.872861207414287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95040317292908	2.14752886985324
Merged-chr9-57421415-4	8.27847227784301	0	1.38242760683106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108847709-1	7.37750417718466	0.419602595351057	0.642279823397277	0.653301847676936	0.513561701494053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56287028992079	3.39149483489274
Merged-chr5-64290167-3	7.89291019755646	1.3461209137219	0.8879725923182	1.51594871887614	0.129532319854694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	2.28284312426037
Merged-chr5-44212094-4	18.4835658558559	0	1.34103319827164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4489261-4	10.9565521803485	0	1.34819195787029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4498400-4	17.8309148717687	0	1.35001314695451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12132310-4	16.9001115683194	-0.0350976110093103	1.11767651336352	-0.031402298061796	0.974948708468227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr16-65416381-3	45.0443854788856	0.676398046673529	0.645038422382547	1.0486166764689	0.294354577415343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	3.22584191142072
Merged-chr12-52687584-7	33.1226483285394	-0.373954654761736	0.3456122232099	-1.08200645014405	0.279249661865174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73309055759185	5.28458299446911
Merged-chr10-19099813-8	40.11508151377	-0.175494126968262	0.383050291270393	-0.458149049792477	0.646845361618977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19572265047646	3.84665863228341
Merged-chr16-21640997-5	32.5354233773376	0	1.3377741856677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31195330-4	14.252889315524	0	1.35052011418844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32521532-4	14.6124427848689	0	1.35391422296617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106419623-4	20.5393331654672	0	1.33982274336257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88436962-4	14.5920884218326	0	1.34200231076815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119492405-4	10.4369980984646	0	1.35199570713205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134117175-7	46.351201191783	0.514195250800831	0.281596985557951	1.82599699986849	0.0678507137529331	0.718966266841265	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6169434634738	6.1794056690371
Merged-chr17-3314310-8	43.9908704295835	0.313882294690266	0.290132626005551	1.08185797306457	0.2793156417943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44891126990706	5.81342228229162
Merged-chr2-122777061-8	43.6771921084268	-0.616776564831476	0.315729261360505	-1.95349826675466	0.0507605824620399	0.595107197237079	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78818058065804	5.07813123143699
Merged-chr13-42246010-5	24.9122660172087	0	1.34800485285989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10950745-4	8.24358543700277	0	1.35739092057521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97855823-10	50.0584955415543	-0.140984016126859	0.288662656733865	-0.488404069033565	0.625263660274698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18346894570655	5.18774155620783
Merged-chr17-84878062-4	8.81480843402523	0	1.34906508577484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4237188-4	16.8821722468286	0	1.35037635876485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34521614-2	2.14959500309121	0	2.41813078952456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-56897836-2	3.00279709888365	0	1.49898313216418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99496846-2	2.98357731085739	0	1.43809262290799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25649926-4	17.2699450033409	0	1.34482236071369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32937147-3	11.9619307673011	0	1.35199982240697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53294551-2	3.24643469952365	0	1.51192457125955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43738692-4	20.19704920247	0	1.34462007152887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94381589-4	8.5052030871063	0	1.3537999524352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68469130-2	2.52457433578737	0	1.51330956067466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78382909-5	22.2307973720305	0	1.34504410146528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83855860-4	7.32463144686447	0	1.34630915687922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99464206-4	9.25719772228181	0	1.36125729652847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16820559-4	11.4333565055617	0	1.35050114123782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10660177-4	12.0916865763106	0	1.34380514188317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81041158-4	11.6177168863185	0	1.34354050493678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69415681-4	24.2514905966901	0	1.35925538257281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105300793-5	63.9062644828752	-3.90481910709526	0.376169027364433	-10.3804907449551	3.04207386550788e-25	1.65364093255143e-21	C57BL6J_F1_Control-BALBCJ_F1_Control	6.86590819465611	2.92978081318965
Merged-chr12-44266021-8	44.5263523438976	0.318163462423706	0.251922235116573	1.26294315496399	0.20660960940024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65589306495687	5.97956636488131
Merged-chr8-3221898-6	21.2045914765835	1.34880857814529	0.391429415125962	3.44585390372679	0.000569258027970235	0.0236758203079067	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53901644661592	4.86102326697688
Merged-chr18-9489843-10	84.5853624351214	-0.468278987937506	0.37833522959815	-1.23773561461588	0.215814108921438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13936571926576	3.70170465700652
Merged-chr17-69223676-4	14.9559306585204	0	1.34939989574381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81405682-4	11.0292321810447	0	1.34732908465854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59452665-4	9.57559976968492	0	1.35407065287867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8766400-4	15.8739269506839	0	1.36103280911254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27234987-1	3.37167672771761	0	1.40764146503557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93939669-3	4.81488514755626	0	1.41297441441901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7114067-4	17.8745572309894	0	1.34802434267387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75315611-4	14.5471260532569	0	1.35847436872015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130902397-4	16.2622595223534	0	1.3472237338586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97797747-1	2.57123988958472	0	1.42671987082612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-194672005-4	14.2426509829981	0	1.349978679443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74497374-4	15.2754930369025	0	1.34790341176657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88794888-3	6.9121256200958	0	1.36891139390423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118144579-8	61.3695643435322	0.609103350032493	0.287972549951168	2.11514378761371	0.0344176941850848	0.463555856840194	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56535631836798	5.30570516097971
Merged-chr3-52634554-4	18.1146385342095	0	1.35219656393925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33503055-4	9.09445242208193	0	1.34981030264492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95674707-4	16.6261087899215	0	1.33853142490113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24424427-3	7.64953167310147	0	1.36325669922155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67396834-10	85.0829820310504	-0.496148025602195	0.31155749046211	-1.59247664007787	0.111277647822074	0.971112735696393	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29817730932234	5.83215502666741
Merged-chr17-65763756-4	18.1454951976687	2.3254951018037	0.548540736590798	4.2394209703672	2.24097068371649e-05	0.00172789965100914	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86448155788252	5.02787369686065
Merged-chr13-30769413-4	10.7594361757569	0	1.35767174150449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170573510-4	10.867520129772	0	1.34057870901322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108098692-4	12.3093584664986	2.70950492972855	1.13520209835671	2.38680401811339	0.0169955486604857	0.289248913473809	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr9-40760570-8	45.3199133593957	-0.318601863674853	0.296928465092684	-1.07299198672449	0.283274711504947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.157904669393	5.87482845346194
Merged-chr10-58399575-4	12.6298036180788	0	1.33980938921705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42340346-6	31.1115455303567	0	1.34542501913509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55487570-9	46.7219426226841	0	1.33966196376668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102899472-4	19.0028899404025	0	1.36650619896145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-15062943-4	17.108713908151	0	1.35712069213859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40985850-4	17.3265038189589	0	1.33825857375389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80813053-4	11.2671883786782	0	1.36569058404295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13295723-5	16.6092222391627	-0.526248561272859	0.600927314507888	-0.875727477463418	0.381178203933582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23279526911171	2.4657467976946
Merged-chr8-84423161-2	7.48936855013105	-2.98435771327848	0.820484818769602	-3.63731009399275	0.00027550017801686	0.013589758781142	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1181421158536	1.14143228603163
Merged-chr5-125278576-2	6.78102823430969	0	1.35736196545592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111725606-12	182.513942031526	0.331735836842731	0.184007233401186	1.8028412835242	0.0714131445468576	0.740971010578857	C57BL6J_F1_Control-BALBCJ_F1_Control	6.97230176329504	7.31276293895871
Merged-chr10-79923937-5	14.0013089172672	0	1.3438923945934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11391145-4	11.7713438777016	0	1.35912491894977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105013250-4	19.1573211420468	0	1.34393487569171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176801124-4	9.78660529520066	0	1.3545083867455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89205599-3	5.1212133717261	0	1.4565022256943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86902584-4	15.3355129928209	0	1.36366135542288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100343809-2	7.61586201753688	0	1.36948077892466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17278596-8	29.2990770753797	-0.0591207878366281	0.299215322395581	-0.19758609740736	0.843368913022044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29822827205082	5.25142164820624
Merged-chr9-94818802-2	5.9749061630363	0	1.36613413735027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-158061169-4	10.8107107750378	0	1.34923920963998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67431050-4	9.76542783350505	0	1.34496039838192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64482285-4	15.0201450482725	0	1.34173349868521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140863718-4	13.1868397958966	0	1.35792053504015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34747195-4	11.5930055296727	0	1.34640052020286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87315444-4	10.6316944427385	0	1.35351222813533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47133279-4	15.3961872745523	0	1.3441545434216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145866812-5	20.7683657571356	0.990141406222898	0.819988100055268	1.20750704328046	0.227236934248891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	1.47751579018518
Merged-chr9-40325822-4	14.0181696377762	0	1.35034195792417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30070861-2	3.67990464746912	0	1.42978958707235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61363385-1	2.94138584952287	0	1.44195766540668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144971233-4	8.56152695029311	0	1.34742160993505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11530286-3	18.1512791604953	0	1.36204150053032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76217877-1	1.88049153808695	0	1.49948755177073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17764245-1	4.17960744960428	1.2815177315595	1.09179607875573	1.17377022733035	0.240487072315709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.51226750748471
Merged-chr6-90477356-3	8.02931222577985	0	1.37683469702112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163827770-4	12.969954287565	0	1.34398699228871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-45367285-2	4.89899049040465	0	1.40317687369692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23091741-2	2.81996500592273	0	1.55765760347263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10142859-1	2.18802375053944	0	1.43469544538777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3189673-1	4.02666310360439	0	1.432830440734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55852562-4	10.5034877056129	0	1.35195310333021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113490201-2	6.52372909100188	0	1.37144992393602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4302546-2	7.61988926483386	0	1.36121919938305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121995595-4	14.500174566144	0	1.34721986816383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96328634-4	9.76080588559859	0	1.35026273148925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54914622-4	11.5055423782112	0	1.34024665172893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29848989-4	12.697826708073	0	1.3473323234318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142091289-8	47.8329527053002	-0.704436312981018	0.284898253028464	-2.47258909274758	0.0134138274289573	0.246838945568954	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83657000495189	5.09773203723018
Merged-chr3-132116312-4	11.5311442552492	0	1.37141881248864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124613655-2	21.9277872232996	0	1.37121580671013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101361317-8	48.5868958605412	0.118881693778357	0.246099145677549	0.483064227838162	0.629050132680226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8728466722224	5.80138531500219
Merged-chr3-55978533-3	7.4222607148948	0	1.37453553879364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84181743-6	29.9147201279932	0	1.34138057485925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85964697-4	21.2570009914692	0	1.3448830573261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34082671-4	18.6703905847389	0.0645939492538144	0.701965389905584	0.0920187094444961	0.926683174670498	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	2.95399403087158
Merged-chr8-33492506-4	18.6516874889034	0	1.3512907685031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53577222-4	15.0566359906907	-1.24071962040161	0.846723996812766	-1.46531765377138	0.142834272220039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62319166842064	1.17788344834821
Merged-chr8-115597339-2	5.92037081456691	0	1.36347739928961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76313427-4	10.5480475386668	0	1.34555819568964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101318328-4	11.082058774368	0	1.34546272921765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7976360-4	20.1440993856182	0	1.34284766053022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51072185-4	12.6391949803235	0	1.34705307549129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-117486639-4	16.4701629287115	0	1.35293962817827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134673898-8	47.9707786266131	-0.076827791573648	0.359883956932358	-0.213479345477154	0.830953097729742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98872933185687	4.9111408009232
Merged-chr17-84361183-4	8.41977573307695	0	1.35363841818726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-121197205-4	15.3235709001357	0	1.35047354952923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68283252-8	46.6708795360612	0.243681838067189	0.30019293972369	0.811750730351898	0.416934678468833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00809067991353	5.28188463340532
Merged-chr13-107945077-8	58.9924874961312	-0.0865999086124851	0.274472668108101	-0.315513778509917	0.752371591185797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06163358398798	4.95141665783273
Merged-chr8-83989445-4	9.59952493244897	-1.5265608346952	0.813395076011959	-1.87677658706746	0.0605487206675674	0.670749522471631	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83225203110276	1.03838943879457
Merged-chr1-120038844-4	8.47116980037706	0	1.36991705412874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80692080-5	34.8598187118747	0.0219048206212215	0.440863049308289	0.0496862249072359	0.960372433832811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55758880326738	2.9833654495347
Merged-chr7-34302087-4	8.96848733324166	0	1.362909082838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71118184-4	13.40806876683	0	1.3508952385247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7308428-4	12.6197673041636	0	1.36154380071222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-143288632-3	10.872314171936	0	1.37601044889167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61408060-6	27.8362378450415	0	1.33601437773717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117724704-4	9.8882389980684	0	1.34539778176793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98608632-4	10.6615073035281	0	1.35074667124518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94711500-4	13.9363769470733	0	1.3418923190687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-97534550-3	7.20887778146877	0	1.3641933075501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63612178-4	10.3326633524556	0	1.34589678694154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34473241-4	9.95429793635227	0	1.34977983230317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132656269-4	9.09042545691253	0	1.35001696984862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60619801-4	13.8884941588691	0	1.34325897409633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92939240-3	13.1392026543397	1.5429862289757	0.766843093022174	2.01212769993755	0.0442064774052022	0.543154472109788	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	2.82323356651535
Merged-chr6-81987178-8	27.5691231839215	0.990381351668806	0.442365869359394	2.23882858119912	0.0251670718483341	0.376252500302508	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89506971517333	5.2516446165475
Merged-chr10-53893235-4	7.66087503444365	0	1.37692195516812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28864806-4	21.3175160989766	0	1.38053449358766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48537086-3	11.6813097949672	-0.0369261680558769	0.809241504617779	-0.0456305909239268	0.963604686528225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81534621159246	1.79065725465852
Merged-chr4-148676841-8	35.9211413954891	-0.307998459702867	0.325252551339393	-0.946951710092747	0.343663386392943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9375769374819	4.72726455205034
Merged-chr14-122056860-7	24.3975278092191	-0.443021779123209	0.468001161612382	-0.946625383571458	0.343829704597742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64361600567935	4.34751984137117
Merged-chr8-117280562-4	10.3065036574753	0	1.35105982161048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97398558-4	11.6316298216102	0	1.35063900365023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113611405-4	11.9895049116881	0	1.37601317717822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180835829-4	11.1944879341213	0	1.34684330105645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72551420-4	13.0652184034965	0	1.36685346154426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87247083-11	125.304387945102	0.0236475955930785	0.187740890627295	0.125958684408417	0.899764629092335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.88969438037881	6.90327542383912
Merged-chr14-103945917-4	18.4488482933532	0	1.35094753828486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89289448-4	10.3329042415639	0	1.35841650626363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91030952-4	10.9178939097827	0	1.3535263820924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-26733066-2	2.99340306129611	0	1.4224832086674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21218107-4	10.5780668047452	0	1.34725778006012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29846741-2	4.07738556484914	0	1.38519744703892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102328353-2	3.98705112557142	0	1.42711994034477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83065464-2	5.47057133904776	0	1.35988805579994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3131539-2	4.84291981145295	0	1.41960620209101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9630608-8	70.8667116205288	0.0171533010525816	0.306955223782108	0.0558820952490382	0.955435734460064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63957248413422	4.61280378124342
Merged-chr16-25805141-4	6.81514189539122	0	1.38408530398458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149274805-7	32.6110946094815	0	1.33833012561853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100343215-4	16.6060578526162	0	1.350619672161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9947869-4	9.93123193474956	0	1.34616109038273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-40308218-4	22.8006749006565	0	1.3825933347241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-54025818-4	12.1490862535243	0	1.34215066142798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81263022-6	31.748679659446	1.5537553254578	0.467504481067784	3.32350894671429	0.000888925713375888	0.0327378813369918	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85971213640217	4.88769870672592
Merged-chr9-119076829-8	40.6707658026458	-0.455871761938994	0.486604228553879	-0.936842993111225	0.348839326446757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64989173876739	3.26030975257228
Merged-chr6-135161517-6	35.7406102100674	0.0716058899072446	0.42711318325336	0.167650853953549	0.866857961682142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57845666590341	3.7884994440989
Merged-chr7-106617113-2	6.52952287835996	0	1.36442993910998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-70420692-2	6.55812408981466	0	1.39024454493848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166921046-4	11.8684279750307	0	1.4134510880837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88067936-4	8.65166166289352	0	1.34688844501769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117831039-4	15.6557146214	0	1.33811044524184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118158296-4	9.24975059550711	0	1.34492405217132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100182583-4	8.96048275536549	0	1.34871318280294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123062133-1	4.05753985673071	0	1.4498711588141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105764810-3	8.06896049851572	-1.17671470776885	0.81427795169201	-1.44510201378255	0.148429233433385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82374999908923	1.63990324542946
Merged-chr3-139064504-6	29.7792901119191	0.633524142923574	0.457088065105674	1.38600018527526	0.165746846915897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11742056194996	3.63285684845656
Merged-chr8-70549890-4	18.3382132545161	-1.93264864721312	0.536197782183796	-3.6043577788441	0.000312925745108711	0.01509346102783	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58475686803041	2.42345445095442
Merged-chr11-23679431-4	12.6078959443744	0	1.35241434523105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47056502-4	10.8506237219803	0	1.35271991141838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116587800-4	8.69619309097018	0	1.35880315292653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34079772-8	50.0906463125362	-0.0673679265859304	0.31712166471649	-0.212435585711742	0.831767225887155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12828948278538	6.03766872410347
Merged-chr1-128014168-4	13.5158523175364	0	1.38019717710196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51500382-4	11.6167119005411	0	1.34377507674127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80453191-4	16.3080152519183	0	1.35463400416579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92488352-4	17.1568380219853	0	1.34619170150629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55236256-4	17.5489603312946	0	1.35314674103952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99789776-4	17.7065848034983	0	1.35674514530343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121545657-4	9.37251775457049	0	1.3485780643045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-39847183-4	37.4714782102949	0	1.37420855946486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162622064-6	61.3611881215784	-1.90522161124741	0.294280768874423	-6.47416281578499	9.53390556432783e-11	3.5129448730718e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	6.91338151197494	5.03863014228524
Merged-chr4-123635588-4	8.59946489735072	0	1.34571344078053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99134106-5	26.314689427515	0.204987007996607	0.458685644310117	0.44690085800465	0.654946644455121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33773048058368	3.62054581280034
Merged-chr12-78299334-4	20.6622413477393	0	1.38648928473629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67258552-5	18.0055540947514	-2.4991499375047	1.141630417949	-2.18910594725967	0.0285891403782754	0.411131503127691	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0
Merged-chr14-51870928-3	32.8590869639592	1.43264143950211	0.84337604558097	1.69869828175546	0.0893760473653211	0.847612262068189	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	2.49049078358674
Merged-chr11-100719439-4	13.6766934867976	0	1.35807871274654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40501648-8	87.591557117458	-1.28791293589156	0.235114942479904	-5.4778012928789	4.30643337256565e-08	8.21380391927355e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	7.05575828154959	5.74533542397437
Merged-chr5-113918924-8	40.7161446473929	0.824476901534907	0.293625272991014	2.80792212855648	0.00498622824213296	0.122812134578208	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76290724711939	5.53767808298563
Merged-chr9-70740167-4	7.85188706185129	0	1.35387236385399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99459398-4	13.581222086937	0	1.34171014550981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16046200-4	14.4735585854456	0	1.34002595428401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62483244-4	14.645476642453	0	1.35205875289063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21333089-4	13.5613625970016	0	1.34854403214717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34005808-4	11.3346448257805	0	1.3431753348854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5429568-3	7.25623986901569	0	1.35454859690886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96757641-2	4.40725295054196	0	1.37817024827287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5605593-2	7.53504193521321	0	1.36358476053566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17319953-7	42.4623095614085	1.02052173446881	0.28715485581171	3.55390728665919	0.00037955299171979	0.0174552631784231	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08640108552509	6.07788053616779
Merged-chr19-56556167-4	13.2347656667198	0	1.3529689005239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77909068-4	10.7170955231532	0	1.3453745247536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28746313-4	6.75162969115684	0	1.36702602887516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134027206-4	17.2487883273027	0.431522388938742	0.480212433912975	0.898607279745994	0.368861879787231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36821206385671	3.76016365218715
Merged-chr8-110594317-4	12.9163749946013	0	1.35385648239644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125385824-9	71.5095999127295	0.672853718307418	0.332109870414265	2.0259973528282	0.0427650559154648	0.529746129382951	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95615775900561	5.68098332802809
Merged-chr1-106553069-4	13.604991938999	0	1.34787082196922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85518395-4	10.4030943138943	0	1.34502358713786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40117084-6	24.6472130605032	0.494650707329773	0.564613571225685	0.876087172782556	0.380982645512788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67154369292436	3.15904736749075
Merged-chrX-86951145-3	9.08404755398248	0	1.37691124247911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97345947-4	8.33157763017919	1.77174673276454	1.26349147736988	1.40226251185537	0.160836870608451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr4-150594575-4	11.2410542633388	0	1.35170992030459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99325978-4	11.895270597533	-2.87217999914256	0.989394929847853	-2.90296615890708	0.00369646577937126	0.0993749670132751	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69422113745304	0.600815099743027
Merged-chrX-38439858-4	9.34355114473651	0	1.35526108823772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53996823-6	32.4917445955216	0.939443504391067	0.432776674139641	2.17073507082765	0.0299512045228861	0.42277785683188	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85711347477297	4.95354969801072
Merged-chr3-41228700-2	2.32904569578299	0	1.52532171262802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35860922-4	15.958902117956	0	1.34594077527664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186677818-4	9.20643493160753	0	1.36221498198698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157457320-2	9.01472313409488	0	1.35625292965336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38923255-1	5.73172245326607	-2.86776762973586	1.26118718354093	-2.2738636002344	0.022974188833283	0.354284803060548	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0
Merged-chr7-121332875-1	4.84731672499526	0	1.36722054641467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34572648-2	4.24276294994968	0	1.46260909633698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-71893790-2	3.97826335446895	0	1.47657812777036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157428519-6	48.4416940685691	-0.836914255495652	0.603817789206319	-1.38603775916527	0.165735373946904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37210355657933	1.6454950719498
Merged-chr10-122690807-7	35.460195687675	-0.702456538518841	0.53015391132311	-1.32500491558331	0.185169520949565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93243551476186	2.88643184345611
Merged-chr6-83017275-4	8.98604941500181	0	1.34919606870978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-27109657-4	10.5695602547443	0	1.36561476946933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10460337-5	33.9416232009449	2.69986769460922	0.458467621053177	5.88889502906915	3.8878628259345e-09	9.84236296262837e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44846862147826	6.08003508573836
Merged-chr4-86396880-3	7.93624886636854	0	1.38859275889546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19416190-4	18.7526122095305	0	1.36568691665231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110608979-4	13.4404513263309	0	1.35052850300403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123436352-4	8.47314649257716	0	1.36231699253795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144704145-4	8.57324617397757	0	1.38380117153937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7774726-4	11.985430056948	0	1.33985867849306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146819482-4	16.5743100754382	0	1.34391592156104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129338417-12	103.92985897967	0.111118545027189	0.199237859623186	0.55771802225413	0.577036949112501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.39337124484233	6.50049038651566
Merged-chr11-105424521-4	7.64386469119686	0	1.38560906229636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33398271-4	13.777298798465	0	1.35080730617605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34846648-8	41.7740928451244	0.406677688303048	0.266178852158113	1.5278362086462	0.126553209764394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00421741898872	5.37619329165713
Merged-chr6-29781896-4	9.08437795820644	0	1.368897441999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122644391-4	13.5335873584321	0	1.36176880415321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5138886-4	18.6949839055634	0	1.35756410996437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85522460-3	12.2193542451447	0.578550619391946	0.700473946291037	0.825941667717027	0.408837182446018	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96739710961373	2.3532682208703
Merged-chr8-82398733-8	43.6512123299683	-0.103870157863742	0.326376518697336	-0.31825254549046	0.750293377522413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8318137369055	4.88731714540455
Merged-chr13-49324466-4	9.93182867746096	0	1.34565438398013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31071055-2	6.20110931518277	0	1.37132795414457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50674730-4	10.833209167173	0.518532510290789	0.768948370874462	0.674339825573861	0.500095289882764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71989966306259	2.02497645810754
Merged-chr7-114016431-6	28.0092385269119	0.216190614523988	0.384637617909973	0.562063106824327	0.574073023507793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91341257571854	4.26710865037765
Merged-chr14-55677719-3	9.22642436850464	0	1.36654542271655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50997270-8	29.2828804266175	0.104989567238382	0.32628607562952	0.321771522231895	0.747625789818855	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86320468120521	5.07286072762063
Merged-chr17-74668066-4	13.7422229116566	0	1.35475050207587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37525638-8	46.6668499132869	1.73512159491546	0.266976661613745	6.49915084122894	8.07746406207795e-11	3.09213287993307e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70933253621819	6.31408247405964
Merged-chr5-72329646-4	13.1441569531772	0	1.35895348354996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75788377-8	42.312441531873	-0.0547583506977957	0.301111802320695	-0.181853883759349	0.855697396356884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80940114153216	4.89410449689128
Merged-chr11-113430316-3	11.3338037372133	-2.165387815556	0.89729848857301	-2.41323020503429	0.0158118292491063	0.27569189154294	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73238230963349	0.904676873936758
Merged-chr8-84197697-9	84.4780729225236	0.152634001787321	0.271525485909663	0.562135083842931	0.574023986374534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.66874922399198	6.7956835967673
Merged-chrX-106031332-4	15.028232464053	0	1.34296850802095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93193592-6	26.0525621781432	0.0710653841487626	0.434115314634184	0.16370162892928	0.869966035148752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40175758108277	3.53180653108148
Merged-chr2-167701657-4	11.8921923678845	0	1.34567847280719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9430045-4	15.8617531071728	0	1.35563904802115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164680064-4	13.872799587892	0	1.34817086171605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32906248-4	10.4847005713974	0	1.35402820830822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12307920-4	13.9488932007209	0	1.34489595824486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81712584-4	18.7498351413587	0	1.34405294657311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72014059-4	13.6445440735234	0	1.35552744171884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53424799-4	15.8915721931465	0	1.35601882024017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16263184-8	48.5511292455817	-0.525730858346225	0.297234388703626	-1.76874170125192	0.0769369896937628	0.775777744901364	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14528172175407	5.59880703051869
Merged-chr7-114509073-3	7.93446412535652	0	1.41841687752437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8993638-6	31.6498537915776	0	1.34068884492099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113606311-4	10.0009142858972	0	1.37530313581695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24407018-3	6.86623091788285	0	1.37622176747834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27761930-4	13.5794107216725	0	1.34431312086488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127118851-4	10.9250801490242	0	1.34599814959051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50642427-4	9.08354077635595	0	1.35587950794791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-108813818-3	5.25561939720709	0	1.40050991751969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21463663-3	22.4066817020115	0.0921498234558585	0.643472791884284	0.143207023852579	0.886126682768482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35526103100457	2.17232302214082
Merged-chr3-14913505-2	5.43056411116719	0	1.3656234942795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119386465-2	6.17456560352275	0	1.36259190162945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35742242-5	30.1139700175961	-3.32969912490932	0.638884222709463	-5.21174104251362	1.87076566469263e-07	2.93910262332447e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82735955565199	1.30139522650344
Merged-chr8-125116743-8	57.0269779980337	-0.175673296010235	0.276896200579121	-0.634437365492262	0.525795430823095	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96877788527772	5.74208392878505
Merged-chr5-96912314-12	58.40693625175	0.0125979053400939	0.229642632338845	0.0548587394761496	0.956251003477787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.86762120257544	5.805391962145
Merged-chr5-122146501-4	11.2324104199527	0	1.36024585042805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-15850581-4	24.3481197416347	0	1.35467002380597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45006033-8	46.3816427634268	-0.0163927019089106	0.271453108915985	-0.0603887057119104	0.951846053777429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19998860069675	5.16721768463508
Merged-chr12-55416128-6	22.3262076930211	0	1.34705984269337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117072520-6	24.1295626557587	0	1.34254337078348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45593280-4	12.7423155352027	0	1.37272548485003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120305272-8	39.126104975664	0.0227126404063393	0.363714712548482	0.062446306466945	0.95020741966163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42234397243456	4.46633376867919
Merged-chr19-46309209-4	8.31125311527385	-2.24775256829959	1.19566912507298	-1.87991185953086	0.0601200913294621	0.667722908886589	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0
Merged-chr19-6871822-4	14.4899318254937	0	1.35343980993426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32239989-3	5.73167840889265	0	1.37586474286398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102843886-3	7.65362385226031	0	1.39038713491708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71206337-4	9.40002719216314	0	1.34238473218703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5615052-4	14.9151245340431	0	1.3637759070047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6335549-4	11.2747681356103	0	1.35397090407305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45677125-1	7.95315568687785	1.900364705819	1.32681563759511	1.43227487826677	0.152065169702346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.88866493597531
Merged-chr1-34564564-4	8.71887580119402	0	1.35423335870063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58940635-3	4.84269830802349	0	1.38904943598445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20371899-4	10.9995646970534	0	1.35844042190875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98058220-2	5.09816262201273	0	1.40849530225806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4900433-4	19.0721244465319	1.10893281628299	0.538062540486319	2.06097383267138	0.039305536576942	0.501551564034269	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08622768639799	4.61734796760178
Merged-chr5-95923015-1	3.65062530320317	0	1.37415086341744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56757618-12	86.3068293726686	2.44791321826159	0.271207891698703	9.02596603265913	1.78116809663684e-19	4.40102348023099e-16	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90032211006254	7.42970092471469
Merged-chr11-43410480-4	12.6882044277432	0	1.34244422075895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58829101-4	15.0188508021226	0	1.34711827502491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86202019-3	18.5573617420058	0	1.34041146509121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62684792-3	18.7615344662177	0	1.35950446798852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67448204-4	17.4760344460578	0	1.34480772139833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13501402-4	16.2239903911435	0	1.33709774161176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87753694-8	50.5525810222217	-0.0509835821432696	0.323747177296795	-0.157479619031644	0.87486686912988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16574378632745	5.13320527895521
Merged-chr19-16209793-3	8.15238975549743	0	1.37150003264169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136138349-6	19.8900654493906	0	1.3379872236889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124496208-4	12.8808358529482	0	1.34017405104718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64072023-2	4.6004009450912	0	1.36524755926422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120762358-4	22.4650957111007	0	1.35308944980641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38484790-4	8.67452708368931	0	1.35101843425522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6297084-1	7.75338303661394	0	1.40579238266623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53373966-2	8.02185307300372	0	1.41115380794848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82670445-8	38.0553893134795	0.371435156425026	0.320566674400158	1.15868300134458	0.246585422231751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91772865988611	5.27567104988042
Merged-chr2-52999715-4	12.8958828598979	0	1.35069360684668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48832648-4	19.5761864461336	0	1.35342886459378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10120653-4	18.0224742375675	0	1.35372347026305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125623385-10	80.0232272550042	-1.67483018778096	0.325002771230652	-5.15327971339772	2.55969720916786e-07	3.87583789953079e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18596230722381	4.54359151559646
Merged-chr13-118775321-8	95.5242214854529	-0.528192133629839	0.200910807972251	-2.62898815131334	0.00856393447508617	0.181491974320159	C57BL6J_F1_Control-BALBCJ_F1_Control	7.67682821506911	7.14894189837432
Merged-chr9-111063043-8	57.6099287469793	-0.755449027602893	0.305241549301284	-2.47492200630013	0.0133265274897891	0.245798812802178	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53656473805096	4.82144655145783
Merged-chr10-96334852-4	10.1413143168652	0	1.34441577805029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47148572-12	97.9581279585758	0.207036324094399	0.222450767608368	0.930706269617795	0.352005525659605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.86935018703441	6.06400771704424
Merged-chr9-72526279-8	35.7928247651663	-0.401539608353839	0.32311828594974	-1.24270159199934	0.213977817068027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14380117517231	4.72527099933477
Merged-chr4-62641067-4	12.213918595749	0	1.3475650052912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58503244-4	14.9861797276112	0	1.35124859797658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50285440-4	14.673511901198	0	1.35071720240423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115018596-8	36.6207431752982	1.0780841016138	0.342217190547108	3.1502920700455	0.00163107313793188	0.0528387989897729	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49105328936558	5.58654904907537
Merged-chr11-118104175-4	11.4548290916142	0	1.35587918222472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76218519-4	18.4278484937826	0	1.35521758245297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115816072-4	10.659579876715	0	1.3537424719551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13655296-4	18.2069195150087	0	1.34673941038244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96572124-4	17.3839140344882	0	1.34127603091914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71483981-4	42.540812785515	2.61291914702573	0.358684638284483	7.28472554476489	3.22325807499332e-13	2.40017925614468e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60746428566538	6.19242347951798
Merged-chr16-35907636-4	9.9620220686523	0	1.3465527013935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155627226-5	19.8741056511189	-0.106009512515335	0.554743694238074	-0.191096381295394	0.848450082704349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72989318984745	4.71095666108694
Merged-chr14-47515260-8	42.4621785003167	-0.167118471830876	0.323224544607999	-0.517035214740745	0.605131576692439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.30347137488031	5.09895220714829
Merged-chr9-42128178-7	35.3377775828167	0.633171033076154	0.377266511479791	1.67831231718024	0.0932861447460318	0.870996486130117	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83006751535612	4.46135684374476
Merged-chr10-53876105-4	14.6568343920508	0	1.38103686908557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92651117-4	19.7061460450523	0	1.35484760220374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70062324-5	37.96741975196	0	1.34098460958196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44514261-4	13.3806452456062	-0.814696361424058	0.701208531542831	-1.16184604832392	0.245298005464233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77223252243827	1.95465925600843
Merged-chr11-5758008-4	12.0550959578435	0	1.34131932737345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53521725-4	12.4863524335279	0	1.37247249036856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60650136-4	19.2587927871721	0	1.34113168210188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33954920-4	12.6316938129761	0	1.34805515922811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16584210-5	27.4206753955227	-1.53927936038461	0.477302875091784	-3.22495304493737	0.00125993331560229	0.0431903064091946	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11857039252692	2.91156459876667
Merged-chr1-127219330-7	38.1266013346024	0.787339137463565	0.425475570342798	1.85049199611912	0.0642426705787685	0.695235383235372	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89170664533402	4.22411109922708
Merged-chr10-15154982-2	4.41315093579753	0	1.40184818493832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113509508-6	66.2527343332648	0.00473391946457221	0.319869734105024	0.0147995229302248	0.988192120186842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83569389685282	4.8438787332345
Merged-chr9-37094364-3	9.19183467557018	-3.09180998378557	1.03140396034843	-2.99767123517841	0.0027205097817417	0.0787036674963795	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16161743275258	0.465515277017237
Merged-chr1-161482380-8	68.9566877933244	-0.100060954283664	0.288086865532864	-0.347329108873413	0.728344084674648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79062009246741	4.85767834406331
Merged-chr6-29940600-4	11.0205134497083	0	1.35026157793657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50050549-4	10.6927746532324	0	1.34648837023126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-16379515-4	10.2971754603413	0	1.34559933191268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12165328-4	11.4607787112331	0	1.3416657471819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23912209-4	12.8810538221704	0	1.3433801426078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167799804-4	11.4064330245377	0	1.3475291039824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8691957-4	9.34112316159821	0	1.34483533592407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3726939-4	21.392158150602	0	1.3415905610668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34535308-6	28.1431858084815	0	1.34229453060854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41628312-3	16.476418535359	0.750190444124305	0.467914140482158	1.60326517029658	0.108876122664233	0.960572215286905	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43851920339405	4.11433697525435
Merged-chr19-55820393-4	13.8244744814867	0	1.34321564723516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172348326-8	45.5221241448557	-0.27682893243262	0.270285354573756	-1.02420988687746	0.305736149887803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9467017948487	5.65507056122861
Merged-chr3-136698033-1	2.90560223454405	0	1.47683174520604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-39996345-1	2.9980740837517	0	1.39951012690706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20106365-1	7.2378455567378	-0.918174604235808	0.685501930903765	-1.33941942807555	0.180434168160321	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86705529831763	3.31862228758823
Merged-chr4-95916386-2	2.84246065308488	0	1.54432466764689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78521098-4	10.3702578220144	0	1.34570861912843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46110387-2	2.89249626259946	0	1.48663212038316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32404845-1	1.5897470971546	0	1.95106710423282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39490426-1	2.8641538003125	3.25358487803137	1.36792657972674	2.37847917150736	0.0173842190112329	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.55008632225961
Merged-chr4-56114102-4	8.45944281811462	0	1.36202601659212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108618361-1	2.14957321625978	0	1.45755613588374	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91259975-1	2.46270388904153	0	1.46025145039823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103372795-2	3.67018590527837	2.76097981011225	1.16936583607243	2.3610915634286	0.0182212310890911	0.3014266283542	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.40024388691264
Merged-chr2-75696615-4	12.9944106752823	0	1.3485922363131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117348866-1	1.69231501237539	-2.3990340710089	1.50435229679732	-1.59472889170729	0.110772874327015	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0
Merged-chr4-62265630-4	14.3070719068978	0	1.34343200121443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14303714-2	2.43632424920471	0	2.35104767416399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55792119-4	9.56401978935877	0	1.35389290386284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95685906-3	11.8178933866851	-1.15375095573269	0.559934486473085	-2.06051061973328	0.0393497516731002	0.501745985259006	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88333314561878	2.38843762269911
Merged-chr5-102010543-2	4.85990303646337	0	1.36566635837258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81083003-1	3.95183873368467	-1.13310520662108	0.838276222181406	-1.35170863330998	0.176468542171541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97316282921634	2.15100933087298
Merged-chr11-35178767-5	25.1880057713709	2.08562027521689	0.400873266562008	5.2026923448992	1.96421892120736e-07	3.06818897522733e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30483543417642	5.33462632674554
Merged-chr4-107552972-4	13.1022761316003	0.620179902677077	1.4029181867067	0.442064197722697	0.658442751108474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr1-37308847-4	8.52688588757968	0	1.34696529667481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62104778-4	13.0911959706435	0	1.34813504458083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100415434-3	9.31029405720112	-3.69295995931981	1.11801253898982	-3.30314717458945	0.000956061960819099	0.0346239654418157	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69949452834228	0
Merged-chr14-102907694-4	10.7739164993413	0	1.34479296833858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-159225638-4	10.9839512516327	0	1.35011264473255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35810735-4	18.5505563542607	0	1.35118124901636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106153713-2	8.3078854412203	0	1.36626377104638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47769220-2	18.5362717683601	-0.340931183272473	0.516201545164898	-0.66046137689023	0.508957796139871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06092144068299	3.05192279715927
Merged-chr17-12171246-7	62.3795399104321	0.200673272714554	0.458000650103694	0.438150628539765	0.661277095506052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31024472866438	3.68399812831413
Merged-chr15-59845365-11	46.9264270340453	-0.159361292896548	0.39233234999716	-0.406189530120831	0.684603346340438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08528992645403	3.61526157702505
Merged-chr16-10695170-3	6.36316414408288	0	1.40259259604939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164074842-3	8.37390109535416	0	1.35121434733734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139830849-3	8.80656782840073	0	1.34308895622662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46905199-8	41.1952624387229	0.844528056646181	0.322427508689832	2.61928040841762	0.00881154832681761	0.184651871818612	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33835988599116	6.28830388662662
Merged-chr1-131072611-5	36.044713600484	-2.51379775835936	0.357708080926527	-7.02751179634572	2.10249038950352e-12	1.14289275083022e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	6.11935515135936	3.54372363867365
Merged-chr11-90238848-4	14.5257921920733	0	1.36076312888779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70415612-4	15.2069299151819	2.41340676128688	0.537564186644776	4.48952296534156	7.13828515880185e-06	0.000667865822628761	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25531563498385	4.83323825045512
Merged-chr6-149174149-2	6.64510956931411	0	1.38521561358486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137956080-4	11.6710178195166	0	1.35999556184041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67263032-4	11.8243663984034	0	1.35227446004121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23125455-4	15.9396659567167	0	1.33830134326765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46874250-4	16.8192452800593	0	1.35051464850229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13409959-4	20.3527033832311	0	1.35624831496273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21220908-4	14.1976478536548	0	1.35944124877339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35764170-8	39.6479784276635	-0.353427804143612	0.321177990106414	-1.10041103385233	0.271153073139036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47473487230853	5.14868844408637
Merged-chr5-108031492-4	8.41121986563433	0	1.34849126081656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85838732-4	10.4372590125708	0	1.34977279298294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102233902-5	17.8790119593254	0	1.37536126515467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102873619-5	59.2036624483688	-0.961179358809703	0.672071844577868	-1.43017352469724	0.152667222084935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50487228621753	2.06906167129522
Merged-chr16-75869480-4	9.01212831552552	0	1.35541560326016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149841117-4	9.7127549941038	1.48201808873436	1.18952401366553	1.24589169424794	0.212804159756116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.13743241080208
Merged-chr5-121249857-4	9.53606759751855	0	1.34961168336739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67700956-4	9.29806734221678	0	1.37504360959908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-139570251-4	15.4933063918358	0	1.35391156064334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98957937-4	24.3865595484288	4.0599587559721	0.542624639113952	7.4820759385375	7.31576493138135e-14	6.02541918037816e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49705754145624	6.1394484513158
Merged-chr12-100013044-4	10.3026755649904	0	1.34564736103395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20740637-4	11.0021786445015	0	1.3544250933928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65747567-3	20.6991031397288	0.516170984692486	0.565205701304175	0.913244476305628	0.361113977013821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98149480288825	3.4631267365416
Merged-chr11-64496206-8	57.9036550342718	1.0376249657368	0.284847007316151	3.64274483875881	0.00026974619920817	0.0133544022247331	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36728882692136	6.46084301421746
Merged-chr2-128870936-8	44.5600923829853	0.0870204441748154	0.30715308304933	0.283312943861415	0.776936955834915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02477948791543	5.1572166919906
Merged-chr2-129514507-6	22.7583099383113	-0.0307717171202614	0.455383730237372	-0.0675731588043812	0.946125422718417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59252346797052	3.5462335275178
Merged-chr8-26961887-4	11.564293007741	0	1.34704962819032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10877807-3	7.15474832720474	0	1.38209551313903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92964364-3	13.5264525042008	0	1.37287572032981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34296547-4	7.55961906871853	0	1.36145807231813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52571006-4	8.16345723387986	0	1.36332196875797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103308108-7	32.4494439563386	0.211809943659523	0.320267463118355	0.661353300136045	0.508385767273825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29084380193579	5.51293566753948
Merged-chr2-73037842-3	9.98115553368131	0	1.35631838202984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64527449-3	8.07745085796023	0	1.3610261836461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59395503-6	20.9725149528646	0	1.34850324502202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57525790-4	9.57283431380943	0	1.34440991506191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115343238-4	11.0113029795567	0	1.36723465105598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42372408-4	11.1482887679309	0	1.35593177167738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99903045-4	8.34834774668655	0	1.35146155824409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113423989-4	13.7246144642884	0	1.35146519297258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96631398-7	20.3021483168161	0	1.34112608654828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101074641-4	14.3890579969254	0	1.37725841483519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70329690-4	21.3971776644772	-0.0370413830051367	0.664479136159299	-0.0557449903081029	0.955544958118876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85705179220891	1.83959545306943
Merged-chr3-61321808-4	11.7009639423379	-1.32739228431086	1.30747836176998	-1.01523078555115	0.30999582887102	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr18-65524706-4	8.82527698232321	-2.2268180916468	1.19882184777846	-1.85750542982955	0.0632392794014951	0.689178826981931	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr8-57540374-4	8.79102493349716	0	1.3484159001555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47864691-4	7.62375800837911	0	1.35311254373993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139176051-8	40.2794885125515	0.0149468614004029	0.275510478225807	0.0542515170263418	0.95673477643457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47124838128253	5.65990154494206
Merged-chr2-165917387-4	10.1221227532174	0	1.35024252833986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34158417-8	42.3639497221855	-0.220609414218829	0.255700941396944	-0.862763402487282	0.388267564773643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60353263678288	5.37310053794045
Merged-chrX-19168818-2	4.57608326263997	0	1.37210038982037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5806529-8	58.7391811468689	-0.308823605010032	0.332351417374246	-0.929208027604947	0.352781287986831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06695071692803	4.730106295128
Merged-chr3-10258524-3	8.53539633253943	0	1.46746253804912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121376059-4	10.5511059406487	0	1.35428635446138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84187228-2	3.60755243030802	0	1.44965533981217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101010774-4	11.7939960088836	0	1.34650693247761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97999359-4	19.6978310129984	0	1.37244227884937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144905263-4	12.4020912451699	0	1.35037322637265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82941981-1	4.13080808536467	-1.04546295688437	0.967167344413855	-1.08095353190193	0.279717784375565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88906532169278	0.662147012823607
Merged-chr16-85124059-4	16.7376237741994	0	1.35580368990229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67361007-1	4.25236788343132	0	1.39528131313185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39918927-4	9.58940093673523	0	1.37263944974061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132672670-1	3.7028751879214	0	1.39768698365639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87017207-4	12.8985687133867	0	1.34688804648601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101685323-7	42.7702433691685	0.812832135618096	0.289816663666377	2.80464251204613	0.00503724138357738	0.123844144898183	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21887190801761	6.08288364451359
Merged-chr9-44522155-4	10.271392039926	0	1.35470093765575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34878807-8	37.872653088788	0.149546428929395	0.288302526436365	0.518713556824842	0.603960506443713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98787005463794	5.15687685970224
Merged-chr12-98290676-4	11.4866404200783	0	1.34095024140762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-69136056-4	11.871240895191	0	1.35003716481868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106135333-4	10.9537340235897	0	1.35493193242608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95495033-4	36.6305627280409	3.44784983019791	0.435277562766697	7.92103734518913	2.35537177779392e-15	2.78338379280652e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90249028066537	6.24604593785309
Merged-chr13-21200668-4	8.59545990139654	0	1.35293684721548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51938090-7	48.7852026031052	-0.790166853901272	0.30856283781581	-2.56079720906944	0.0104432294893739	0.206731067666743	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24245885870594	4.36478018758898
Merged-chr2-156356196-3	15.608846060177	3.08077857270294	0.966686906593478	3.18694558878359	0.00143783821198032	0.0478123796136528	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	3.30085144834262
Merged-chr3-152478145-6	29.4091181191796	0	1.34111091034089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76024824-7	28.8932825767151	-0.393088478164952	0.377461556632421	-1.04140003467359	0.297689926459719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96788573922445	5.58322709859793
Merged-chr10-19999909-4	10.6903795026416	0	1.35382432593471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117282774-4	7.71074870980195	0	1.35937377386229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55293569-4	10.5376436208277	0	1.35106293057755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-45092595-4	13.2426172481715	0	1.3541968564995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88586376-4	11.9778267786276	0	1.36116709543876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77526734-2	5.58344114109689	0	1.41220812743782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182512008-4	11.2737423222559	0	1.34380909325338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80231623-4	16.533250601433	0	1.35119490317199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75613321-4	11.4547809261215	0	1.3505487714579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25973289-9	109.90457561638	1.25821419140714	0.202328642028721	6.21866572518456	5.01400190536019e-10	1.5058349700192e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	6.52064948788184	7.76579141430994
Merged-chr18-56933005-4	14.0409510687878	0	1.35223687835688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122034510-3	8.03946478872743	0	1.35464402298517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67031409-4	9.59950170622315	0	1.35260794172136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24266606-8	82.3713495963889	-0.174706323602985	0.335980187014649	-0.519989958798872	0.603070573679028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46632274381484	4.26594982075409
Merged-chr16-30252272-4	8.18994085931442	0	1.35125645449384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124671112-4	9.02189854258271	0	1.35487911612481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106320806-4	7.61693773223411	0	1.34727841107083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171044676-15	107.25117561353	0.202146280288081	0.147828339992149	1.36743929004964	0.171487654196361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.39294711776901	7.63156543632324
Merged-chr13-97190573-4	10.3838225744705	0	1.3590408137304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82845896-4	16.5420361883245	0	1.34768038038579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-48331631-2	5.3711373566929	0	1.3672294000632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4325291-4	12.9280657430134	0	1.35128470120255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79813974-4	11.3737873710278	0	1.34756595237299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60815077-4	12.1718713086392	0	1.35880213536074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105528173-2	4.95083408115192	1.45813201774892	1.24709177046783	1.16922591607025	0.242312622258228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.990919527803163
Merged-chr19-53825081-2	8.1143886744758	0	1.39645592310927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74201261-4	14.4876997128198	0	1.3453947147164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72161866-4	19.6116231158004	0	1.33961580567572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55467067-4	20.7960563189342	0	1.35320079254465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79319502-4	11.7970551752134	0	1.35462898943537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132121267-4	5.79064433429136	0	1.4115953232587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54802432-4	10.9485833009282	0	1.35713880072679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123058055-10	98.2536454104693	0.53079095667715	0.281430649874505	1.88604530783637	0.0592888494154572	0.661239754898408	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63950871306518	6.29749577503702
Merged-chr16-87625318-10	109.384539514345	-0.334705840408479	0.283028118320445	-1.18258865018324	0.236972212829132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.17080330816161	5.82372970597093
Merged-chr16-30512166-8	33.7582132232051	-0.298485593552452	0.261633898151629	-1.14085214362959	0.253931457239327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.55502969127093	5.30221548001405
Merged-chr10-80848741-1	4.00251775654458	0	1.3882787766433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89216821-4	11.8547970657329	0	1.35322957856355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37729335-4	18.5704694792173	0	1.35494519847909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95361381-3	10.9324958419894	0	1.35285353061657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55252609-2	6.82596261436748	0	1.41039144112461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53249712-2	10.3075364548032	0	1.38422182593721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141646194-8	38.7881821978997	0.632546894119038	0.269269596508781	2.34912111252193	0.0188177848280589	0.308014443079931	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46507950802655	6.13380938506837
Merged-chr1-172578247-4	19.3214069885844	2.21108678691389	0.699492275124683	3.16098814174862	0.00157234899519113	0.0512846994310757	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	3.79182513775478
Merged-chr2-128420686-10	85.4155970688199	0.0362126826295828	0.313681622062031	0.115444068388621	0.908093150912805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.22771779991531	6.27627857864818
Merged-chr12-51865975-8	71.2565802130019	-0.166367108414648	0.218061359675501	-0.762937132292582	0.445500889854539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.25513437549988	6.07092408577176
Merged-chr2-131076991-4	15.4115073550398	-1.27517009141264	0.875650019166052	-1.45625542568603	0.145322022712246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38835823208704	0.97908007631626
Merged-chr5-96222064-6	21.7414230484695	0	1.33852217861622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89458076-4	10.9025195111737	0	1.35268930577252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-50657536-4	9.76241264253441	0	1.35039397589435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69538495-8	113.105315313417	-1.68445980491567	0.236877565520169	-7.11109893930519	1.1512257061523e-12	7.11130433644692e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	7.01626667763731	5.34930701967437
Merged-chr10-19105195-3	13.4742395041799	0	1.37653285569618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152789682-4	11.0662845989736	0	1.3647869045467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152742591-8	36.1383430605883	-0.867880468892908	0.428061186253316	-2.02746826099603	0.0426145471563709	0.528816464943781	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73272444344118	4.87636867347972
Merged-chr16-75900102-1	1.53122902134311	0	1.79928314807475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105964697-8	38.5164775377671	0.659587217978892	0.335730209216875	1.96463469735847	0.0494565330671664	0.585366547497706	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29273813549059	4.97138787023056
Merged-chrX-155194253-4	8.12652709346436	0	1.34726849492776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85437231-4	8.70332273910392	0	1.35011714738418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17811260-4	11.0721799356355	0	1.35104530335885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53045684-4	10.8885210725376	0	1.35646017365806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117890879-2	4.24010613102109	0	1.37961140762902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5856458-2	4.99168024562891	0	1.4008754542201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64877676-2	2.71917293187039	0	1.67919430254992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52565641-2	3.65496623004472	0	1.43741535149015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5303359-7	21.4384084929892	0	1.33894777714119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55928851-1	4.81930608722086	1.05848138744981	0.957423043310283	1.10555244606409	0.268920282261327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90896656829731	2.65192549957914
Merged-chr19-5946246-3	14.8166870478949	0	1.33763225073493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58898516-2	3.3512545275143	0	1.48103590541293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-18970595-1	3.78388897630791	-0.0806650588748371	0.975923092746727	-0.0826551389903132	0.934125756653807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82361065065357	1.32471430176536
Merged-chr6-87920151-1	2.74856308070638	0	1.44915931890439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76402413-1	1.98607930535275	0	1.53846243375852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104986144-1	6.56684648195765	0.90751641053989	0.892444892923887	1.01688789720856	0.30920676145752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.993458951033742	2.6085181155194
Merged-chr4-125145335-8	76.6999199277133	-0.20205962902167	0.283592795309904	-0.71249916204981	0.476155730154516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17224585993801	4.96710878149465
Merged-chr13-110599800-4	7.50204017477713	0	1.36068837985706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13964663-4	11.8655485998596	0	1.36288606825129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23006461-4	10.2501653955074	0	1.34305763581006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76529858-4	13.4380392184052	0	1.34476696218685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70394549-6	59.6099490604254	1.9907039049066	0.316702729392523	6.28571755199278	3.26342803262711e-10	1.01952117485964e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40650587117757	7.50816587034344
Merged-chr3-54723978-4	13.7028746748216	0	1.34744748660714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64812744-4	14.9668567218138	0	1.34140666403801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170845857-4	8.97182747687067	0	1.34210770175177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91475901-4	28.4136354021159	-3.29360366319912	0.54969153866285	-5.99173069174571	2.07619540926005e-09	5.53234834568467e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28937086098521	1.94207584056134
Merged-chr9-55310323-4	15.9235642088617	0	1.34425202363753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-152283371-4	11.1531730593154	0	1.34520651818271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26637291-7	32.3424675850054	1.45683668030383	0.42671699363145	3.41405826823498	0.000640028861421647	0.0258357666349716	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70208978115177	5.27336977359908
Merged-chr3-79120378-15	91.4018790346982	0.367956486368824	0.31327067165394	1.17456410594125	0.240169150669688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.28036819405617	6.63578116133363
Merged-chr11-79652460-4	9.14255649179009	0	1.35419469539522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68134736-6	25.2898190946968	-0.619661039844911	0.48896316501388	-1.267295952298	0.205049487307673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02643832661353	2.85694129656796
Merged-chr11-70804868-2	5.09750852266035	0	1.37979554437089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120959551-2	5.92034843465506	-1.90574247845565	1.3145634354349	-1.44971511232181	0.147137979729837	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr6-88033696-4	8.43737852009794	0	1.34640258409837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67205101-4	23.0162592841672	0	1.3390843465988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184729417-4	12.6501461674991	0	1.34358020998827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120159005-8	26.1269945423741	0.0308114312705516	0.319824304044355	0.0963386174250174	0.923251641438938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81191628731495	4.83855250042104
Merged-chr11-77520790-4	9.8753897810956	0	1.36076729549184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67341670-4	13.0735166003007	0	1.34468180526721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92861634-3	9.65657773803512	0	1.43690501957843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46179394-6	35.7912468571979	1.43982410361848	0.360472962778516	3.99426379310213	6.48955805596025e-05	0.00410192891120864	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94707627612327	5.33326917933336
Merged-chr15-6304003-4	14.9669718537364	0	1.34272879054766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71855319-4	9.49311654800421	0	1.36991701216451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69252926-4	20.774480025909	0	1.34235947793421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60259892-4	11.9116184003219	0	1.3552881673709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78257411-8	34.8593166241763	0.000416725363873679	0.268905763432149	0.00154970781791677	0.998763512553252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31168667604118	5.22903978155682
Merged-chr2-14252254-4	9.75416969998965	0	1.35173491706299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92870431-4	13.5325653992303	0	1.38465563662899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70882988-8	50.3908728766821	0.331893494069481	0.310868288320825	1.06763380678751	0.28568572772436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75727401990846	6.0680981335188
Merged-chr18-5345067-4	15.8400226825704	0	1.33851483878101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65458437-4	25.6273091341306	0	1.36105302426871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33303657-4	10.3285231581095	0	1.34314137023345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53806616-1	3.03906005499239	0	1.54113730422593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-9965790-4	14.596599320456	0	1.34569082728986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149890109-3	6.46898321393607	0	1.37318156112612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54284499-4	21.3913193769183	-0.10529156936728	0.57683550282048	-0.182533094534662	0.855164384913013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	2.49233917051521
Merged-chr6-114364847-4	14.2518973638408	0	1.34069205573577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15034553-4	13.630894244528	0	1.34291882575788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154008783-4	17.4228818213093	0	1.33673527973023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64337035-8	50.7851400064863	0.533078844134516	0.369208095575063	1.443843866165	0.148782899606803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78215899742242	6.256092667239
Merged-chr2-84999665-4	9.66779846562219	0	1.35059871555925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-126910897-8	26.5436813714186	0.306391020415034	0.364758680971611	0.839982806163508	0.400918026961807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24709447736122	4.76997091465619
Merged-chr7-97077216-5	16.8589385616038	-1.79441104224333	1.27878171769424	-1.40321918699215	0.160551487758275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr10-81551726-4	11.9479968997301	0	1.34819727199607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154911442-8	100.76966059441	1.2673764202168	0.247602716030643	5.11858852170244	3.07830746515517e-07	4.54711183419484e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29741954197946	6.64270942035818
Merged-chr11-74838385-9	122.275819024238	0.45670542439293	0.261964795502531	1.74338473044375	0.0812664337294714	0.801589923988448	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01532669273724	6.48464635970941
Merged-chr9-44721474-4	11.4134133248843	0	1.34359934546855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96181556-4	13.8029163141074	0	1.35491541978774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74491316-4	9.15675697983208	0	1.36016495370306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86442609-4	14.3893453812778	0	1.35369704400513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75592840-4	13.3287068103048	0	1.35763053619864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-126702190-4	10.2461787955573	0	1.37301527186671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106815595-4	13.4697230708657	0	1.36073721226368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35187698-8	39.2092830612112	0.333127703662038	0.37813954107487	0.88096500756074	0.3783367599808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18119363589914	4.59838153806043
Merged-chr10-8874569-16	107.601855019232	0.289306053358051	0.23540694348604	1.22896142770405	0.219086268332049	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.75479398204581	7.01802483277681
Merged-chr2-154990487-5	35.7009087272064	-3.03558388543304	0.39390909510272	-7.70630565065133	1.29512228262683e-14	1.28002822111476e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	6.39514933289241	3.49371942046804
Merged-chr2-158177198-4	15.0394583641184	0	1.34591446548478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191292625-2	3.26958013763416	0	1.58905721311597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125273876-6	38.8931653548509	2.79272050022275	0.629231645526248	4.43830268245188	9.06710525241089e-06	0.000820097794369058	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	4.30183205005662
Merged-chr15-97580917-2	8.86835904127485	0	1.37882616649568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94278829-4	7.55570781204028	0	1.35490186073072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114931240-4	12.8359698873279	0	1.3527030444846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31183083-4	21.9301936382395	0	1.33847638588999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8462020-4	11.770453693761	0	1.34205351930864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17455310-8	80.2165407088232	-0.517007753306569	0.293128633101692	-1.76375725508606	0.0777728569433535	0.780586176252539	C57BL6J_F1_Control-BALBCJ_F1_Control	6.1608236715825	5.38958079451682
Merged-chr8-84204047-19	253.682728654099	-0.0547856183521055	0.198879471949134	-0.275471459247023	0.782954050112695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.75671873664898	7.70868163975729
Merged-chr6-81443393-4	14.5945405504697	0	1.35536437996042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128446291-4	10.1654627417553	0	1.34763173717985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131294219-8	59.1455043212796	-0.206844484056949	0.279074954491108	-0.741178958298599	0.45858493983023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16441546785631	5.01803061568406
Merged-chr10-94771606-4	8.13037669748924	0	1.36083541083823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64400937-4	11.7705753497801	0	1.35972643412132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87527577-2	5.6812014089926	0	1.40837751974547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32795974-8	79.4800203556836	-0.827234735184144	0.271538207272119	-3.04647638170175	0.00231540668892981	0.0696987590889924	C57BL6J_F1_Control-BALBCJ_F1_Control	6.07897712572115	5.0983190949019
Merged-chr7-73524581-4	10.5852043807399	0	1.34306908644648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14959611-2	4.69496249697696	0	1.37550250622192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39619949-4	18.3439368912754	0	1.35601292690497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96411121-5	10.443921747649	0	1.36270735986264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6571056-4	8.22656749078291	0	1.35361217559607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119352291-8	34.9121032504486	0.0609286248094586	0.372203895225128	0.163696902668377	0.869969755969613	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32329951600425	5.30750931362321
Merged-chr4-141016580-4	12.9734295429676	0	1.35214307264211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136578428-4	11.3898433762703	0	1.36139596602307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149235261-4	14.0328978161158	0	1.36508995902611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109062583-4	8.99345116607522	0	1.34606518536938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32491199-4	11.5050090805566	0	1.34666940831304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73361178-4	21.955219960389	0	1.35508333920795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53592486-10	89.8264368184864	-0.230868774428723	0.237338866913079	-0.972739009971233	0.330683031832229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98687931350738	5.7348120142067
Merged-chr5-24596784-5	11.8348269202784	0	1.34590384730911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32288676-5	18.6290636498102	0	1.33957415614433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32328329-1	4.36489322674906	0	1.38184877000341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8736180-4	14.5746055426923	-0.425955174029683	1.04736133532558	-0.406693621067529	0.684233026167796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	0.904676873936758
Merged-chr13-44510845-1	4.17245661213097	3.06991732918627	1.2948785604215	2.370814857099	0.0177489193851349	0.296940553866965	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.74142748524765
Merged-chr9-44192935-3	6.31236498671345	-1.55273924512065	1.14950596427961	-1.35078833287633	0.176763246512585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	0.465515277017237
Merged-chr9-59544478-3	8.11320331344548	0	1.35758631100523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82863188-4	13.2801451523518	0	1.34042345493301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67114015-4	8.60060843913479	0	1.3803267612144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81046748-3	6.38358816963573	0	1.37994915374153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111526760-8	40.1114693073217	0.762781587061175	0.348169658548418	2.1908330273274	0.0284638776471035	0.409785694448083	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55923167803649	5.31993360624903
Merged-chr7-132339627-4	13.7108133078795	0	1.3606297987397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-56659017-4	12.0558859953965	-3.53275758175735	1.07351862067617	-3.2908209636198	0.000998954693123715	0.0358699352121507	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09296523225154	0
Merged-chr4-56222642-4	11.6485182351379	0	1.35675218495283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99469663-4	20.2824647158676	0	1.35555686971361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121722666-4	9.4004013120133	0	1.3636201803971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50377993-12	143.488561219682	0.70711323834994	0.207469879275019	3.40826938744492	0.000653763189796641	0.0262660112595385	C57BL6J_F1_Control-BALBCJ_F1_Control	6.48486919318445	7.26932433224798
Merged-chr13-5420022-1	4.65265238721856	0	1.43685145922408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81039505-4	9.33413035612462	0	1.34833264190981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-118127379-4	9.02567918735302	0	1.34392545606506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72844483-3	12.5570737814671	0	1.39104272486405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115640753-3	13.1821916192546	0	1.35032150840328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80922116-3	8.92302093931968	0	1.34581379522093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87944569-4	10.1799832309207	0	1.34797481149657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165583722-4	8.90639661755581	0	1.34903621822681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35724720-4	12.9715274549426	0	1.36457170309159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126771699-6	23.1808470181818	-0.210028995600911	0.56707815652298	-0.370370456320688	0.711106483562292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43491183200938	2.68097198226837
Merged-chr8-104176090-4	13.8967888728024	0	1.35906131766618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18767211-5	21.8149094693306	0	1.33709263542957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108756099-8	39.7657521801801	-0.686153651519132	0.267928093551491	-2.56096194476622	0.0104382789382834	0.206731067666743	C57BL6J_F1_Control-BALBCJ_F1_Control	6.13655852124923	5.37120960839625
Merged-chr11-8594742-4	13.6759324729877	0	1.3589380452619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96371164-4	10.2496520525058	0	1.35963982160246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40229941-4	10.2813163587707	0	1.34483806052043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83728575-4	14.1250562711531	0	1.34745815004693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112728880-4	9.93117582685632	0	1.3503507310406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59669032-4	10.6161063194013	0	1.3463600386313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107451295-4	19.0768308757614	0	1.35082241342824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31069701-4	13.667265135968	0	1.34352633702662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57761419-4	13.1203194248647	0	1.36005989558779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117327115-2	5.28049572091691	0	1.37308472353123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91703304-2	7.70812133053316	0	1.39213409832198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45142780-8	48.7166502648831	-0.994747412599049	0.279883369019237	-3.55414977347467	0.000379203195100329	0.0174552631784231	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01313291160887	4.99152609565633
Merged-chr16-57301789-8	38.4038839320634	-0.0893652349866775	0.324341260951726	-0.275528419432206	0.782910294886693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6007293954713	5.59951147281649
Merged-chr4-55387001-8	39.2731248382907	0.318152877278072	0.301351399592108	1.05575377353052	0.291080722641778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92262151088568	5.15031078664191
Merged-chr11-46077898-8	28.7765153607336	0	1.3389572775946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21261802-4	8.04027092467365	0	1.34795328980652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95292187-4	9.13490600710476	2.05439550379281	1.13384336717877	1.81188651207138	0.0700037339073767	0.732499128290874	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.39949824061849
Merged-chr17-50071823-3	7.3794596600791	0	1.3730318429015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-36289350-4	11.1091049553989	0	1.34531124052198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25588758-4	20.8552455827952	0	1.34993238299177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-23825147-4	22.0983988483786	0	1.34862525571415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118011909-4	11.9991639203994	-0.849765044417579	0.540348102142987	-1.57262520409985	0.115805628100345	0.994115794192827	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59017879480329	2.78974526253627
Merged-chr17-5220660-4	7.12287512450905	0	1.35784900349845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24202882-4	12.0660696737228	0	1.35484227352444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27345689-4	13.6627133353682	0	1.36194949946255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90655028-8	43.6468011045033	0.124128375525699	0.27820691495588	0.446172862185628	0.655472384222265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60322374695801	5.59174540898692
Merged-chr6-66849137-4	12.6542138763321	0	1.36689153348602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44582605-4	20.2762219737521	-1.20075823308644	0.726330403662785	-1.6531845934456	0.0982933010239587	0.901116321061902	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88854826306555	1.66784418339515
Merged-chr5-142932471-4	9.98402980508874	0	1.34384094594515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32765868-4	10.9573641768634	-0.0363091714233782	0.786895221959472	-0.0461423203625047	0.963196815140661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76891977860032	1.74618975104912
Merged-chr13-49326461-4	8.33470249809761	0	1.36341633831223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136148616-5	26.2771009957254	0	1.34000298536321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21847277-4	21.731807168756	0	1.35107273960087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18876209-1	2.40604757488531	0	1.54674495291875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135323573-6	33.0562529352174	2.67545505923966	0.585851140411401	4.56678305236528	4.95266121866628e-06	0.000493984791166018	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49176722630688	4.42816015105876
Merged-chrX-159802617-1	2.47083225013428	0	1.47661920123093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126695552-1	2.07840642556868	0	1.4489954134469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38106184-4	8.79538842957825	0	1.36339174202948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98793262-1	3.11106060345734	-1.62471335181423	1.10578725260788	-1.46928204135335	0.141756305749931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90781241071831	0.67591700901439
Merged-chr12-117481116-7	112.083866949811	0.826843237319324	0.414206172559265	1.9962117710861	0.0459108767282076	0.557317853521357	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98556206695392	4.30620260445003
Merged-chr4-137331899-1	3.32005941318789	0	1.44618762545111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152832513-2	7.90973919490092	0	1.3728604556649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90200431-2	4.40080152644	0	1.44560550460408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171750952-1	2.65390641437055	-1.91557661633119	1.40955873890262	-1.35899027366715	0.174149670806979	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr10-26798183-1	2.64600723450113	0	1.48453847228546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128957721-1	2.50415807115581	0	1.4494396571684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-30480655-4	10.8969137481243	0	1.34580079966868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91176326-5	43.2537729028058	3.0700077272787	0.449509840033176	6.82967858290291	8.51050936106436e-12	3.9540408406675e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46801699129062	5.83464293824103
Merged-chr3-152555284-4	14.0906947346178	0	1.36720386051494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21032000-9	207.258201019911	0.284052628889636	0.145017386375921	1.95874878170333	0.0501422144869765	0.590491629533913	C57BL6J_F1_Control-BALBCJ_F1_Control	7.07972982785875	7.37660426854969
Merged-chr1-165681488-6	35.0462928492229	0	1.33757900802287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112287249-5	22.2225264906294	0.1698549770114	0.541044389275856	0.313939078526879	0.753567309326013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47341853569617	3.1200788169859
Merged-chr11-103315545-4	17.2606169316521	0	1.35265605462827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64373854-4	16.1203785204458	0	1.34836647479517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66853426-4	11.2287686892461	0	1.34209932166134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135734331-4	7.13447615493321	0	1.36384977174608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56912901-2	4.73332450331692	0	1.37324158937294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12466276-11	110.558393892184	-1.21524377498094	0.247768208379287	-4.9047607153886	9.3541300981378e-07	0.000120779372447666	C57BL6J_F1_Control-BALBCJ_F1_Control	7.28853006910702	5.93354675380291
Merged-chr11-53775978-4	16.4468265918066	0	1.35419503905579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126987429-2	4.83108607851047	0	1.38893886046983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25303710-6	35.5467940687986	-0.0113104770750722	0.417786516063808	-0.0270723841966809	0.9784020009035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90447266582512	3.84226568095283
Merged-chr8-76897157-4	6.76353124525659	0	1.38170595330025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68759399-4	11.8055852987592	0	1.36148467125091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97511055-4	10.3878234545653	0	1.37848719960787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20373009-4	15.9433150952513	0	1.36080658844246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45448549-5	48.3783300469677	3.084171993505	0.348286131893353	8.85528222653834	8.34723377911433e-19	1.8149891239955e-15	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30915810202608	6.89446599945565
Merged-chrUn_JH584304-5805-1	3.8352930433752	0	2.41599410231845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125331154-8	44.2089079709465	0.40527368974871	0.361501086575411	1.12108567525472	0.262251395541645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79633381393985	5.20058796735572
Merged-chr15-74926902-9	50.6172839926945	0.108285438969069	0.280422713369237	0.386150742456044	0.699385031603511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00799603545677	4.9898432340116
Merged-chr12-12209441-3	18.2195842022487	1.18435932323925	0.684429288861583	1.7304334319316	0.0835528650326586	0.815705853144807	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89807913501705	2.79874750381123
Merged-chr15-57898148-3	5.64834807959002	0	1.37687687800369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109751893-8	73.8350927868804	-1.10083344564914	0.256419083288109	-4.29310264873017	1.76193497081784e-05	0.00141264045838772	C57BL6J_F1_Control-BALBCJ_F1_Control	6.99058480223414	5.89487993806663
Merged-chr17-29054068-4	14.1933021167096	0	1.36854680988829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185208018-4	10.1805558181817	0	1.35197047978138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117822062-4	13.3590359352094	0	1.34467564994177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73234181-2	7.85744448942178	0	1.38443673531724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191438644-4	37.9370560371173	0	1.33953029305713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70781272-14	126.500903918267	-0.022366329954808	0.172160767537798	-0.129915370816974	0.896633383201083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.845159779052	6.84722405723151
Merged-chr13-47265351-4	10.3060262172225	0	1.34599458046433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8212638-4	15.1484968055513	0	1.35317357341467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145825402-4	19.5941020836799	0	1.34910559073147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-98554083-1	3.20599702231005	0	1.45264709703335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-14836940-1	2.0022837456336	0	2.43049301258969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110002233-4	11.1389524607514	0	1.34744149153604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71942563-2	5.89206002690946	0	1.38028430899217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122377483-9	121.644999347025	0.0577926436640229	0.201715325642952	0.286505963192501	0.774490626851882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.38136391024047	7.45784313202615
Merged-chr4-3692967-4	12.9250195661395	0	1.35460971933787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105745519-8	38.7675093881489	0.0602291702039896	0.272171445103934	0.221291290057963	0.824865631411608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24217147293617	5.42419711415923
Merged-chr3-81057912-4	12.0930679385889	0	1.34897085643515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136499441-6	46.1098239751027	1.16560084996972	0.446417211110165	2.611012346659	0.00902746344978384	0.187365980769859	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93113305247234	4.1774032799293
Merged-chr16-44243442-4	13.0626944646228	0	1.35542086076092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52637931-2	7.20865304675634	0	1.37284874246473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8634988-4	13.7301703605157	0	1.350865854752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78373938-4	13.5290110684628	0	1.3501089415535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115718438-4	11.2533321240104	0	1.35320838313322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63253376-4	14.2923925915214	0	1.34665427274948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142938503-3	6.86940874694388	-1.87340949077404	1.29063420838541	-1.45154179131644	0.146629053950945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr1-155384073-4	9.88614478516504	0	1.35194610853833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116625551-4	13.7710248790869	0	1.35854208956895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45417440-4	8.67101903451779	-1.85840727547685	1.24602710831726	-1.4914661672061	0.135839147453667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chrX-106633724-2	3.59814958325845	0	1.42437113548291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9666110-4	15.1801668628501	0	1.35474532001687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61344717-4	15.0419241698275	0	1.36947315318085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59544936-4	10.4077282371251	0	1.34748433720383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84222178-2	8.85826807634846	0	1.4531666509257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9380880-2	6.18651687905956	0	1.3892635943548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84585173-3	11.9633076156033	0.127906599778134	0.812112643932851	0.157498594232834	0.874851915707968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	2.28966581249056
Merged-chr7-116626208-2	3.86861975141091	0	1.41219519248803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9447417-4	14.9991130263403	0	1.35822244112531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36902015-4	12.4562737222364	0	1.36682092972278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156044403-2	11.1252827974971	2.34560365264969	0.861936975073008	2.72131689495164	0.00650223960133303	0.148137151085022	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	2.98349163249041
Merged-chr4-150488276-8	58.3949257219604	0.0525850975633991	0.26295434671707	0.199978050258203	0.841497747731802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.7783940795077	5.81369165026936
Merged-chr16-55623619-4	14.7623534400545	0	1.33923459369277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3516904-3	9.13114356982399	0	1.35966453545769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12542271-3	7.42323393024846	0	1.37579150963064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8862141-4	12.7131799884249	0	1.37207613658933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39458971-4	11.8759179642796	0	1.36904338896105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57713029-4	8.25909421986366	0	1.37590885898483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41627809-6	31.2939377342484	-0.913819415608586	0.545276429714529	-1.67588284732388	0.0937611421265733	0.874230175790462	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90553399046049	2.5628126341579
Merged-chr4-119127433-8	46.71743246928	0.550988949913235	0.309432994311809	1.78064059115175	0.0749711841528636	0.763891021436834	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91765789525436	5.49286603456617
Merged-chr16-22683791-4	10.5495445150796	0	1.35054562131418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26356395-8	31.516827588818	0.856208846228262	0.407969849186319	2.09870618609669	0.0358428090256582	0.474788191018737	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52639890346519	5.54424056592625
Merged-chr2-51372954-4	10.4304497597828	0	1.35858486361094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12824749-4	24.3467146623309	0	1.35439626960019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90216722-4	11.7662307694091	0	1.35657756221514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101146543-4	11.356524077622	0	1.34485985508089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30407387-4	10.3999067288377	0	1.35376113124633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16502111-2	5.93998648917923	0	1.37442153506051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91235593-4	11.5449803875908	0	1.34859511472637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96637371-4	8.75278271527731	0	1.36050311271806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62590368-4	9.05519542344365	0	1.35120874947742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34888706-2	6.60368637227584	0	1.3648491304146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65768622-12	82.1194186091466	-0.247214918852153	0.2514831448911	-0.983027784860909	0.325593764033155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.52701821471644	6.28710683249975
Merged-chr7-100946596-6	47.2343167096801	-0.564579547726051	0.77080758179395	-0.73245199069276	0.463892735554953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.2636608194585
Merged-chr12-32501279-2	8.63597139620068	1.90588871459172	0.980379542975551	1.94403150111349	0.05189165249821	0.605057558590776	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.15100933087298
Merged-chr6-31208431-4	13.6324619231427	0	1.35440889059544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110385669-4	7.70511033759091	0	1.35603010177811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-44091710-2	10.6405340977292	0	1.39070442503569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84110198-4	14.4183853504344	0	1.36142432311708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131427152-4	10.8193004105314	0	1.37364101788909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10983823-8	35.4121022117738	0.888699809188044	0.301166851094931	2.95085533469922	0.00316895302692874	0.0888401844202266	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86475089989128	5.84274274865208
Merged-chr9-67845273-8	48.4317176567408	-0.27023562530336	0.28251152765723	-0.956547251520423	0.338795823861417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68301288075505	5.31302559460168
Merged-chr1-180365652-2	7.84421117468781	0	1.35120592306022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108001125-4	8.8018274477278	0	1.35079173695174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-26253577-4	12.158756963969	0	1.35260950527747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77547078-4	16.5601395001338	-0.0340919132077854	1.27607407371129	-0.0267162494012857	0.978686052610325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr13-36315038-4	18.0738444515374	0	1.35766106244507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99599561-1	1.847128141756	0	1.54212260491775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132335204-4	9.16860700458379	0	1.39760311945993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8816902-4	14.1344177906806	0	1.36612608742521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21946645-8	75.9997169799009	1.01494198367576	0.276581765802969	3.66959109082694	0.000242938760480383	0.0122163812034719	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98209259841195	6.11301280785377
Merged-chr11-76589272-5	28.0642462758916	1.42162974791756	0.924056137054174	1.53846686463185	0.123934504319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	2.30741877293786
Merged-chr9-121286030-9	31.2948978471519	-0.502980296167758	0.384200066065491	-1.30916244059682	0.190479331975639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42372297950969	3.90002857563809
Merged-chr5-127611331-4	11.0558199967955	0	1.34450934169827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43755622-2	6.32924293985469	0	1.36944759128307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91027134-4	10.0524458794253	0	1.36200795688138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-22026641-2	7.18723038477502	0	1.40175475713719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39055292-4	18.5461062969413	0	1.3496997924194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58537915-4	9.99954737040324	0	1.35404992362107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17522318-4	24.4549584907006	0	1.34234947447406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57910698-4	11.4117323409184	0	1.34243485116143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98672722-2	5.48287619987948	0	1.3564711361719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91478318-4	13.0351116421645	0	1.34737039879727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154264665-3	13.2723233257748	0	1.35093223485192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124026612-4	10.7653336222184	0	1.36382145229234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100053804-4	8.55821171642575	0	1.37005656932825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88981747-11	100.616707672626	-0.246604727724619	0.256666362015758	-0.960798780907174	0.336653351686306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.86432181768719	5.63045294757878
Merged-chr12-33041003-8	27.3773420540201	0.837182713899665	0.37954735755665	2.20573980356248	0.0274022232545923	0.398917368477874	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91884181450402	4.84758079581738
Merged-chr9-44089050-4	17.4033218554909	0	1.33983358846541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-194879867-6	21.1921957660157	0	1.33647754205745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28777963-2	10.9792420253911	0	1.35177491398401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123818816-2	7.87029513141238	0	1.3745143663765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73035408-8	51.1327957310944	0.47060984761253	0.305467166212566	1.54062334570206	0.123408482661701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37363086252492	5.77837843117961
Merged-chr7-46607890-4	12.5234517322538	0	1.35014157345448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88465250-4	12.0192686728231	0	1.35188415380617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64703992-4	16.8803952704231	1.77772275776749	1.26965222753937	1.40016511546062	0.161463879543266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr1-105967118-3	26.2024430054901	-1.57712324595634	0.391889243620921	-4.02441065078559	5.71181742581789e-05	0.00370511555429635	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15441637635639	3.58046882774403
Merged-chr1-151584825-6	21.102080286129	0	1.3381659628868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83040145-5	12.8402587044542	0	1.34015606305595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91743226-4	7.83939471082744	0	1.35885305787044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139235748-6	50.3625546616587	-0.945542256673018	0.416199612524148	-2.27184799846049	0.0230956926514008	0.355718122107207	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84331670053856	4.00407314105188
Merged-chr1-75188120-4	9.87055941302983	0	1.35099355419896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115678355-4	9.40443800038503	0	1.35990539442729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31192037-4	12.0206426092958	0	1.34736417404373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180268803-4	8.02815622621279	0	1.35285012570846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84245481-4	8.96179044148074	0	1.35512836889127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99979718-4	21.1240443648685	0	1.3540084578807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99211195-4	13.8902810874358	0	1.35639030675765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11367429-1	2.69782861288066	0	1.46943884772194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138211587-2	13.8362987451798	-0.047287629173075	0.828322437946692	-0.0570884320003393	0.954474751321926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23948114767965	2.55982224292851
Merged-chr4-133910445-3	21.0965151798414	1.11928655194007	0.421580762402193	2.6549753967954	0.00793141930797769	0.171770526757912	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07025374527102	5.4066165634196
Merged-chr4-150673031-2	5.00727055444335	0	1.37686360252415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61167564-4	14.5835489647036	0	1.34672989970702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41571253-4	11.8401094702443	0	1.35692609929959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16168609-4	9.82769074315186	0	1.36101548348261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35710544-4	21.1777735833295	0	1.34996877681134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81401343-4	14.87516562614	0	1.34093090755171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119875864-4	15.9507648054726	0	1.34894829120064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48337022-4	8.60780330863786	0	1.35170854809825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68795791-1	2.91581330128852	0	1.48012141237388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88851278-1	1.99769212702582	0	1.48942602357818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-81076577-3	5.20272526554108	0	1.38844088983239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57392172-2	2.85966664754709	0	1.68742730582335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12327351-1	2.48965935318331	0	1.42265167213007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36317279-1	6.47637580251323	-1.880882577809	0.764840647756739	-2.45918229284177	0.0139253889656499	0.253846485172288	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12283661469433	1.86501351763573
Merged-chr14-70994624-6	26.9112203567701	2.3157299998514	0.758009030320572	3.05501637476805	0.00225048234623559	0.0683048407923061	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.67535048019656
Merged-chr17-28013396-8	29.751486968797	0.298653456927218	0.336066933043627	0.888672545740906	0.374179090024764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43444330524693	4.76096637840102
Merged-chr11-16969865-8	46.1563461560227	0.115799262299773	0.31890412656885	0.363116224131935	0.716518065497241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29128639751343	5.29949915326559
Merged-chr10-118588177-3	8.77255639722772	0	1.35645924802925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12382807-4	12.9402115850226	0	1.36227320965444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29219274-4	16.9224175440101	-0.142517263709112	0.470922581066025	-0.302634168415743	0.762168672177114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46701791671767	3.3756979614154
Merged-chr10-67566358-4	11.5169876704075	0	1.34790535763051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81610494-4	6.52713052927153	0	1.38852022545557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8911757-4	22.2148935419984	0	1.34164437330388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66796934-8	50.6189928229313	-0.0558486045748463	0.231831183807923	-0.240902037670299	0.809631042811075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68955566614679	5.66728268368879
Merged-chr10-75146813-4	10.0416816912366	0	1.34357517254025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58116520-4	7.26340606108901	0.483690968892064	1.20323020204574	0.401993706665348	0.687688657859043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.723581231604105
Merged-chr5-64602097-4	11.4299423108536	0.171007720634035	0.469636917637995	0.364127508318779	0.715762796137191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72355394136653	3.85886906081488
Merged-chr7-67425664-12	98.7516698457665	-0.160610088168551	0.194005034800989	-0.827865567165847	0.407746637096626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.49846934923053	6.3799887433361
Merged-chr6-134615475-4	12.3411939376668	0.0291429742235596	0.704783919846646	0.0413502257967248	0.967016692888241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52139425992504	2.03681675675745
Merged-chr15-87074790-8	28.3042672783547	0.342527550888806	0.381313220759504	0.89828396247724	0.369034180361553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56547357561537	4.85512754873976
Merged-chr16-44991132-4	17.3135152727956	0	1.34645648472386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55572321-4	13.6875667949709	0	1.34256500654153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65196693-6	25.3220072885297	0	1.34165713944661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90198691-4	14.5986410291739	0	1.36839340847521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77850388-19	177.473715165614	-0.186825011077225	0.163681450518452	-1.14139391168314	0.253706037148152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.36989108743793	7.2104418954826
Merged-chr7-97336836-8	58.2031252320091	-0.904414846391664	0.262891915373137	-3.440253554804	0.000581169447014311	0.0240241748823201	C57BL6J_F1_Control-BALBCJ_F1_Control	5.91805164904103	4.93457752871474
Merged-chr1-153754208-7	25.3707727274839	0	1.33624815048985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141165016-4	13.293078153313	0	1.35789302484026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102683927-4	9.83573234285484	0	1.3484520779719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89095677-4	20.7589839052974	-0.706152260995209	0.674193877233743	-1.04740236427627	0.294914041746748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34574658350842	1.97656658922368
Merged-chr4-40287629-4	10.338465500385	0	1.35208505542694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160068119-4	15.5049943387605	0	1.3515178009351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163587661-4	11.1504340421212	0	1.34496245748301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-67478696-2	3.51235195319787	0	1.49354342077663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78197647-4	8.44179819502771	0	1.34748531241902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138283032-8	36.9081042363299	-0.322156260245247	0.324694071850123	-0.992183991563458	0.321107780149278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20642715389979	4.89297109626445
Merged-chr1-181881753-4	12.6777951236968	0	1.34846012785649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115063270-1	5.04100420543865	0	1.38146894010224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75086399-4	28.8803934996597	0	1.43933344920297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5870077-4	8.58319509270969	0	1.35527821037774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32339972-4	6.9268460611086	0	1.38058063268853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-5311945-3	15.505562922967	0	1.36700973389571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146125051-6	29.0913613767913	0	1.36034932244775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97962015-2	4.78895068018531	0	1.38760732715739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134595024-8	53.924526966619	-0.507289545427325	0.245608695282457	-2.06543805317612	0.0388815711679346	0.498599510997347	C57BL6J_F1_Control-BALBCJ_F1_Control	6.83183582496643	6.32901201919454
Merged-chr13-5716959-3	8.7213988258488	0	1.35858431020878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145274277-12	90.6773278068415	0.271532652488471	0.199549149702928	1.36073069162513	0.17359881170812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.93346103085155	6.23104105486162
Merged-chr12-12223485-5	48.9524968487054	0.284219121101938	0.392985326370738	0.723230874105995	0.469538053622742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93819784929114	4.0598484134944
Merged-chr6-8420288-4	12.7793250111408	0	1.36961566154574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10372527-4	10.1990069318688	0	1.35600284814995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72712791-4	10.1943817313008	0	1.3621986608813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20379804-4	9.65782258026607	0	1.34788613008382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40978831-4	10.7999901742062	0	1.34368685313344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-52094798-4	17.8410016235596	0	1.3532445238771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55892476-4	12.0711629889642	0	1.36961660055208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79525234-4	9.19961785952424	0	1.3896430405041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46169034-3	13.1906449845021	0	1.37737249823557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10876008-3	5.97151074327274	0	1.3967292054868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136035402-12	59.0927979527906	-0.144307423361219	0.225478174943984	-0.6400061708725	0.522168587558073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89963007234361	5.74191142359502
Merged-chr17-29398319-8	47.920320022368	-0.63625925897944	0.341511385424697	-1.86306895211766	0.0624525657798205	0.684309418106282	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79200792560005	3.8654468265629
Merged-chr2-128334300-6	23.1672963202079	-1.14831118554027	0.550586990123903	-2.08561263912511	0.0370137255291439	0.483643155747031	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9392982047584	1.92763241379101
Merged-chr4-102515188-7	34.1352662435251	0.49470257839701	1.1580334856524	0.42719194611053	0.66923952699612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47614437676521	4.79334850436349
Merged-chr9-105759060-4	16.9340968163653	-2.7860616847388	0.614597171615331	-4.53315083994978	5.81102865340937e-06	0.000564074476019071	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71513272595673	1.8079825392299
Merged-chrX-167333582-2	2.53182691432136	0	1.4804355590463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58467812-2	3.36675298506782	0	1.46947136959337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92061833-4	9.67384914111309	0	1.35793972697657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58989524-3	9.71033704429999	0	1.35508685909966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67629102-3	10.7653916842521	0	1.36564649053829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166744661-4	8.06028008679568	0	1.36259336609296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151689218-4	16.2709540392917	0	1.35554164026649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75164927-4	10.325311122534	0	1.34953256782684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118913253-8	40.5105764381063	-0.404808118040259	0.306214681694022	-1.32197488311404	0.186176514806587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18419768100403	4.74355092699076
Merged-chr1-92742529-4	14.622852208602	0	1.34745983912547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99045085-4	10.6110332597577	0	1.35438111383276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4767053-8	32.6866819286457	0.276226608473392	0.335992586334234	0.822121141085569	0.411007954412428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80880154696192	5.04377876985324
Merged-chr2-129387846-12	82.1520786276039	0.13991200849475	0.24020169190505	0.582477198162518	0.560245295937565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.57594285842545	6.76134607939689
Merged-chr9-35421479-3	13.1433770053184	0	1.34187520884323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58506992-4	10.2177507325785	0	1.35337073484217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70860794-8	60.1370546413085	-1.71276430943689	0.307179799943001	-5.57577129015224	2.46435525328467e-08	5.15230335435775e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	7.08190342108758	5.22847008763861
Merged-chr17-27790219-8	36.3511352357001	0.0174034713319955	0.333312032878324	0.0522137505259183	0.958358376544207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39120331303952	5.41862882968872
Merged-chr2-30441227-4	6.78263399959096	0	1.35025704195395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13851479-4	9.53884205082205	0	1.3584027667527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7113064-4	7.42415494601177	0	1.36754264214888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180357922-4	17.6374842891518	0	1.36715804303569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40958777-4	12.3501289565641	0	1.34926806097097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-96208582-4	14.6374284777723	0	1.35001892287035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71924252-4	18.4935498157143	4.57283944928005	0.847305690983306	5.39691813467372	6.779530216873e-08	1.24083664329629e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	5.05542696674448
Merged-chr6-82797580-4	14.9259094355176	0	1.34004678398508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98946709-6	30.5981843844416	0.817772787779369	0.528168557543124	1.54831781653833	0.121545796954896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71204808382565	3.38554205839445
Merged-chr3-52196469-4	12.025972034764	0	1.3398350039054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112840388-4	12.346123993868	0	1.36225430535506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55654983-4	13.2712517365402	0	1.34858456757363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113854748-2	5.99523475283086	1.27175521253561	1.34235048314586	0.947409211307612	0.343430299159946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr7-43985830-2	6.80925639950222	0	1.3755116255844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43553301-3	12.3615738295787	0	1.33969791084487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19418820-4	19.0251834305921	0	1.3836887943825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83430773-4	11.5541667902417	0	1.34818436488105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43460839-3	10.5269409149346	0	1.34371767078999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182368958-3	7.78057788946498	0	1.3727166988136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58568506-4	11.0999221526367	0	1.35584470093196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19840346-3	6.37534502333897	-0.935404385033832	1.20475226154777	-0.776428826812993	0.43749582949273	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.904676873936758
Merged-chr8-84198657-8	111.04038569797	-0.130928025191914	0.293567678546814	-0.44598923777992	0.655605020004554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66182155981717	5.57316003766365
Merged-chr1-143988911-4	13.2776964193079	0	1.34783017807821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5454378-4	17.8890826988127	0	1.34028199636991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124319724-4	7.6542242977837	0	1.36119640631025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73041908-4	15.7415618701171	0	1.35314500460264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56114033-4	8.8414230787101	0	1.35142729368021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89296572-4	11.346082811596	0	1.3578394834339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33156949-4	12.9874064060603	0	1.35316393399581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81132852-4	20.4468393382015	0	1.33828617680282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106099338-4	11.1367179501602	0	1.37041393766338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99122654-7	28.3883058639344	-0.885396718596124	0.55675656188119	-1.59027621624164	0.111772557245129	0.974161365927199	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12488039271991	2.2200817938085
Merged-chr19-40693409-9	50.4600628945347	-0.09832967232274	0.26403094534652	-0.372417226297811	0.709582230135727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96028980906037	5.7985155930115
Merged-chr15-84466624-4	7.82498989854041	0	1.358109339984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73611025-5	28.257962234073	-0.414995803232423	1.02054230247037	-0.40664243140913	0.684270628148704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	0.577068348605183
Merged-chr7-35051721-2	9.08268691043494	0	1.38227521360553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118380671-7	24.5881987778151	0	1.33858424630241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78356183-3	14.9463439076829	0	1.34658630565031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88867524-4	10.104552718901	0	1.34758654824993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74788036-4	7.74878769817257	0	1.3481330545409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69189080-4	9.66254138650518	0	1.35093886628293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166360368-4	9.42257388903933	0	1.34727498713419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91498777-8	34.2870020494434	-0.137059922289224	0.283411964637553	-0.483606690580286	0.628665025586998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40582447277592	5.29460603082469
Merged-chr12-102297701-4	13.1387774133022	-2.4097463202728	1.18849186603084	-2.02756652287452	0.0426045086191814	0.528816464943781	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chr9-61025564-4	16.1167391091308	0	1.34588018587441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136965066-16	96.5383478584561	-0.24838176646624	0.226253295856513	-1.09780397021823	0.272290097453559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29066078032793	6.04627115607545
Merged-chr7-111383878-3	12.8212646565627	0	1.34786389465522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42564099-6	31.9660861171804	-0.583584007783279	0.509501806454806	-1.14540125351851	0.252042979317286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43285906107659	3.54045695610118
Merged-chr7-139220519-8	45.7277960122658	0.499865021985884	0.311379982603283	1.60532163245298	0.108423040878621	0.958601280027707	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05063785370404	5.67405293393807
Merged-chr10-14130338-4	14.4630906916999	0	1.34915019286484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105798567-6	41.5395843430024	-0.241046746138946	0.576172819526911	-0.418358412562513	0.675685087893721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95087636052832	2.62155752609076
Merged-chr11-102434578-8	30.55694345415	0.130475562872272	0.347781386393975	0.375165457315377	0.707537418181434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38656837931857	4.72504661634837
Merged-chr12-81669781-1	2.61011897805011	0	1.42466494601129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12955761-4	12.9124177201527	0	1.35155016469892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67102854-5	12.4637831506832	0	1.36817220761803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-18227-1	4.44104203576928	0	1.62043739356839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102404444-1	7.06772970341278	0.970514864374072	0.671780665532819	1.44469008140375	0.148544957146611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06245009089352	4.53092736579695
Merged-chr9-32020063-1	1.54353901106456	0	1.57568409132909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118504631-1	1.19006354489505	0	1.73706120419042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81986746-1	7.53485859388335	0.52035989048419	0.638387645390051	0.81511585357554	0.415005997739756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44975065122858	3.87651304977833
Merged-chr19-45964008-1	2.12838677493877	0	1.49676958826464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3282670-4	13.0036440253798	0	1.35771636335762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60185569-1	1.63717349338604	0	1.97648805665175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17276125-5	96.6599725547802	4.3389576055579	0.294230046129826	14.7468202606452	3.22505549698686e-49	1.75310791760709e-44	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99813062760014	8.35364767306562
Merged-chr10-8953170-1	4.6215463723551	0.242868910657495	0.943177598113852	0.25750072005864	0.79679225951534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2547128493771	1.84656301641358
Merged-chr17-37524798-8	36.7743800520848	0.418048899663922	0.250427846636793	1.66933871483644	0.0950502717592059	0.881814215381216	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32560479666409	5.74037297650485
Merged-chr1-95339794-4	12.4259481326808	0	1.3672805086607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120927422-4	10.1426418153806	0	1.36419730890765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84370537-8	29.8384138773948	-0.640103632135647	0.350201960134283	-1.82781281946624	0.0675776486039185	0.717331263515018	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08794236848704	4.43557373001901
Merged-chr15-97949830-5	12.742223121352	0	1.34762747028102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125422381-5	17.6500997069853	0	1.33903731470148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73441751-4	20.535036534458	-4.1759338915657	0.790166941225921	-5.28487547844872	1.25790291421601e-07	2.0847056254228e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82846808787622	0.724326877898254
Merged-chr17-72939693-4	9.66528657440806	0	1.34609982294173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80832403-4	15.8856783521513	0	1.34338704719841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44169281-4	8.19009319481122	0	1.38174259693007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126489923-4	8.94102865909785	0	1.3626895408099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45229520-4	7.92774182227224	0	1.38805552651008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35556324-6	52.0314977887752	1.26584520357094	0.518129564454944	2.44310552883152	0.0145614786860171	0.261921329562178	C57BL6J_F1_Control-BALBCJ_F1_Control	2.575641413063	3.7616006370302
Merged-chr10-26762689-4	10.8809520517076	0	1.34675886004591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84685681-2	9.42896926272882	-0.140420394509735	0.565599425868167	-0.248268276252573	0.803926842618482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43335120402952	3.07462213079607
Merged-chr17-55722377-6	17.1884895798785	0	1.34749667463286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148069926-3	11.0848984492074	0	1.37013247906844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92715654-4	9.53975095020585	0	1.35262140973374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107259345-1	4.26628299038661	0	1.40332261295455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35269701-8	34.0026626073655	0.1401773389743	0.272138464749106	0.515095648472677	0.606486183376897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33714558568624	5.41606907748009
Merged-chr18-65495976-8	134.910664870404	-0.700284334898638	0.339122178638833	-2.06499125981508	0.0389238272836503	0.498670828968171	C57BL6J_F1_Control-BALBCJ_F1_Control	7.47433590606411	6.79530036560156
Merged-chr5-31602593-4	12.5134732355618	0	1.35631316313137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29263779-3	8.26237307628381	0	1.36277939321096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135267105-4	12.9386390705316	0	1.35223304984189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5777567-4	12.1904711600107	0	1.35077389332281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32635274-8	45.4631349488837	-1.25273375234054	0.264004390120054	-4.74512469952059	2.08377924935676e-06	0.000235983658782883	C57BL6J_F1_Control-BALBCJ_F1_Control	6.46695834681224	5.24224628042866
Merged-chr12-32735449-4	11.1046393158798	0	1.35205333162284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113913755-6	21.9293678557823	0	1.37353944339122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13214097-4	9.89401275540174	0	1.3535690197845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34526938-4	16.0226403098885	0	1.34381361859532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75181721-4	12.7463992518972	0	1.34783935802319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59184286-4	10.2661858573087	0	1.35611547948407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108477801-3	7.20198557239175	0	1.38174193486351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95632466-4	10.2970125290863	0	1.35704690221206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8451241-4	8.20828532973127	0	1.35227838989849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46868385-4	9.28466239031276	0	1.35016744416366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80814047-4	9.43418394930809	0	1.35820553457738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107903687-8	67.0438680016309	0.0709550017535164	0.310630983098374	0.228422165251448	0.819318059510695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99331308267655	4.93948851617715
Merged-chr18-76162138-1	6.93099783534877	1.80498147560525	1.18459224598921	1.52371542335901	0.127579814942936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.18909650862134
Merged-chr9-107644750-4	13.2500487631044	0	1.3455006731305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17982874-4	11.3909896755259	0	1.36753791466044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60960742-4	11.9895235380155	0	1.3450097594886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76356122-4	10.7180594755472	0	1.35569548233287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-21632691-4	12.0471706429594	0	1.34067575904278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95293287-5	13.3845488420846	0	1.34727629153248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145218067-4	16.6987285273973	0	1.38180012087493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-23597932-4	8.26494174737494	0	1.35177526894047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27691643-4	8.62486621225551	0	1.35053505380289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39777363-5	19.4332337903932	0	1.35290120860812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49784450-2	2.43898885300556	0	1.51784992352845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149160649-2	2.7196263678753	0	1.47270051709267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16131762-2	4.03154301480602	0	1.46862456622756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102009870-2	10.2877550839975	-0.191415718118386	0.541499200431275	-0.353492152834083	0.723719510673329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75604983780945	3.46494681590549
Merged-chr2-27764204-2	7.41866292298631	0	1.37340325271726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93889863-2	10.1784986924355	0	1.35426077269777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24781329-2	3.38276347941009	0	1.41353674808624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45083224-4	9.24154313852238	0	1.35648898779385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128380824-2	3.43791098304071	0	1.44143198321375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28444493-2	5.1377414370183	0	1.42487288033793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149340935-4	10.9129711946371	0	1.3411688736437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65655194-8	41.2370517737769	-0.583284559500795	0.282715061294895	-2.06315346918282	0.0390980494197129	0.500228934469447	C57BL6J_F1_Control-BALBCJ_F1_Control	6.09023837851626	5.48420794417026
Merged-chr19-7307234-2	3.0234507480701	0	1.49475411307293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12871296-1	4.80969297304255	1.50829432113745	0.794630662507613	1.89810737529021	0.0576819388155245	0.650525417442551	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75485430327507	3.23466946014457
Merged-chr2-117019731-2	6.01151094090657	0.153844581570098	0.968899737127337	0.158782767375113	0.873840026197943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.28032775213398	1.25163494309627
Merged-chr7-128411148-4	12.0886611932244	0	1.35067791113014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35430729-8	73.4479345688768	-0.984553247125002	0.267678984836596	-3.6781118537416	0.000234966920796352	0.0118704152858447	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41028369944647	5.38723834206666
Merged-chr6-50378667-4	9.58762076190731	0	1.349719522535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191910802-4	10.0343134615119	0	1.37311822693644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193170064-2	6.63532744109631	0	1.3804802101756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98868733-3	11.5767829130674	-4.46991634645142	1.01406301736465	-4.40792758429139	1.04364424803687e-05	0.000915023510952193	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96194241223882	0.376242425970964
Merged-chr1-128712882-11	100.415265076177	0.142690665379673	0.215269203642655	0.662847555363926	0.507428192995561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.19737585783168	6.32146384127818
Merged-chr11-96967777-4	9.77248956774746	0	1.34675990270424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34672141-4	9.16517029170213	0	1.35131299691391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139422644-4	9.76723345183995	0.845121725040335	1.16960626034297	0.722569426733846	0.469944457219677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.15786140276852
Merged-chr9-94362746-4	18.0370165246251	0	1.35339129050941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93457870-7	50.3698369688692	-1.10587540888626	0.400511202350358	-2.76115974383873	0.00575964972001302	0.136545594734334	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75774761217898	3.37995232386451
Merged-chr8-46896848-2	4.53623978377516	0	1.43903502369343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45041391-2	7.6965411110792	0	1.42095608342663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77836299-3	7.34076319730312	0	1.36451847944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71133266-3	9.55171226185299	0	1.35153826739464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75342912-6	29.8385109167614	0	1.33921194626929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42574356-4	12.2298327138939	0	1.35273789043836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40503384-3	4.31310683715432	0	1.44988027355341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62500408-4	12.1532643310931	0	1.3558973967159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93007315-7	65.4669394039223	1.65360732720822	0.2519415917155	6.5634551085774	5.25750682443134e-11	2.13278219006913e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85931770887298	6.53101298364127
Merged-chr9-107629324-8	51.4340039818916	0.792467367240815	0.341949325392759	2.31749943162074	0.0204765415764097	0.325748997235017	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14975877341639	4.84401082255554
Merged-chr14-70886017-4	13.6404270324618	-1.76919043762547	1.1907150690414	-1.48582182557728	0.137326255535494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	0.41385117919798
Merged-chr8-72295939-8	102.995923090631	-0.135225483321667	0.264390434850676	-0.511461329522151	0.609028059839124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79402400659821	5.60985987267228
Merged-chr16-92676661-4	8.57582561029175	0	1.36802807031851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28430992-4	9.94977222641604	0	1.35831396735402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169863022-4	10.6648563231015	0	1.35025033880492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28658711-4	11.6712536591105	0	1.3457770487453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121973270-4	7.03373309826202	0	1.35857104070279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-98202440-4	11.5877092532278	0	1.36740283039949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91834256-4	11.2508555930142	0	1.34231384155695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40931345-4	9.37573640361591	0	1.36671657497851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71096726-8	34.9943826279955	0.0223829728599378	0.35527225562583	0.0630023102156094	0.949764664691793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19770907578923	5.33917784045149
Merged-chr8-106953751-3	8.50603920517766	0	1.40968505375776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116608580-3	12.8491868672636	0	1.34806187043027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61242329-4	8.1748128083534	0	1.36294239056425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70968879-5	17.3706215628621	0	1.3517244155608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135568682-9	58.6277711109999	-1.11946674219267	0.349552035913094	-3.20257537413112	0.00136204651272943	0.0459872586245086	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33959958501454	4.21678920661508
Merged-chr17-83680439-4	11.7474329786385	0	1.34021872884515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-91492905-1	5.07837982410363	-1.48703003101598	0.914503378885632	-1.62605198116163	0.103938597851392	0.933674531949764	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84515340046558	1.18909650862134
Merged-chr2-170321639-4	11.6698878841015	0	1.35057129106128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25487210-4	13.4424891292513	0	1.34482025675661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61861927-4	12.609556047636	0	1.34486144123351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152766651-4	10.4873216271916	0	1.35008148902985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88707300-4	16.3774397505606	0	1.33965040003865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88745531-4	17.7623641672518	0	1.3377744097971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116597783-1	5.90651471884661	-1.97752087203594	1.20409293017157	-1.64233243338965	0.100521129086354	0.914209144387675	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05629245276768	0.600815099743027
Merged-chr10-127610768-2	9.18858571924614	-0.105567730127743	0.815388353147029	-0.129469264210483	0.896986343838526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05043424441622	2.51010240258394
Merged-chr14-74848359-4	17.2669290302178	0	1.3805428216569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87397289-4	14.0509507119852	0	1.3681164409511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109126299-3	6.82181861560823	-0.0390165355054772	1.21668676949627	-0.0320678554938431	0.974417937819533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr12-85347711-3	14.6465056513511	0	1.35161487432773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105271393-8	46.3706172919994	-0.47954548067969	0.363518140267501	-1.31917895576493	0.18710929194687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.88758092869766	5.15924932019308
Merged-chr4-19604683-6	22.6243843970887	-0.695028562980627	0.538384378672913	-1.29095232052206	0.196720211201928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40500680697766	2.11318657531541
Merged-chr6-134072610-8	31.6801091939598	-0.14540136709777	0.320963661889819	-0.453015043016564	0.650537909412736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85636781156867	4.72800878868919
Merged-chr18-54997742-4	9.14822483428325	0	1.35947435009673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106332947-4	23.8585125677717	5.52206487901273	0.979911550948842	5.6352686869195	1.7478560733186e-08	3.77030588450499e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	5.01417689650274
Merged-chr12-99796111-4	24.3680003863597	0	1.346971287216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80069334-4	10.8523692030701	0	1.35509123247576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30592528-4	10.5115154508905	0	1.35308644982353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90597692-4	24.5858619487702	0	1.34469645446706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95000803-4	11.7364131990706	0	1.34737030449922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185350080-3	13.8237644939097	-2.46928218269113	1.16017636393235	-2.1283679442681	0.0333065887659532	0.453271720660623	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41083941945204	0
Merged-chr14-55728478-4	9.13974962754597	0	1.3518341005787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29853248-4	15.1073906538407	0	1.34765497441871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71150683-4	12.2687899074305	0	1.35086792440509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19098879-6	32.6972309420904	-0.503668509763869	0.614825957237049	-0.819205018648353	0.412669452051205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98923977879559	1.67656321522231
Merged-chr5-25087162-1	2.85201197393707	0	1.5027745389115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62088126-3	9.23648576585235	0	1.34859596652802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156532218-6	39.91163687655	0.114304512216173	0.277285233683383	0.412227188219806	0.680172911014205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.23903042687269	6.38328911473456
Merged-chrX-96145104-3	17.3744400849808	0	1.33557258069282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23305904-4	12.2033880903689	0	1.34745342934839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136609937-1	1.81816426058853	0	1.72455073983983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96871687-1	1.60073752390626	0	1.46316749313659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-39838089-4	10.1707733398385	0	1.35691578062314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100583316-4	15.3793156085335	0	1.35143072729072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117965862-2	3.36638156007442	0	1.45821283994157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142396725-8	39.9659512253864	0.461081972229239	0.354488674467834	1.30069591904854	0.193362559715566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20686959134459	4.76428642096798
Merged-chr5-137099086-1	1.42793271637916	0	1.62169008465726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-25721737-1	2.28598842763334	0	1.48661803574741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127185042-4	17.168869642897	0	1.35956202941624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102608264-4	10.756707562806	0	1.35400145281733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173978943-2	4.82348352385032	0	1.41133125638629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154009999-2	2.96263740393202	0	1.57361796635562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50551137-4	13.1321087858916	0	1.36826272053437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73772192-1	2.9943025766682	0.824496146170282	1.0817829978433	0.762164082643232	0.445962079897348	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.34695791138986
Merged-chr2-173783891-4	11.121133417348	0	1.36049339481909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109838774-4	14.6516551579152	0	1.35571704155208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138345108-8	46.8080692692879	-0.85007795051546	0.298620198962842	-2.84668603620225	0.0044176908203417	0.112583804642735	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8102558031193	5.01466759449395
Merged-chr17-56153909-4	9.37271281132429	0	1.3503936241498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138229727-4	12.4521241064422	0	1.35135086475064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21115942-4	10.7310161686403	-1.14255233389533	1.24638124791767	-0.916695702702679	0.359302118576476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr10-8766213-9	50.5646454363196	-0.494498349504062	0.350614102806588	-1.41037780724082	0.158428154826322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17271980130391	4.56833457544837
Merged-chr10-111986627-4	14.6188806868128	0	1.33993060865469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103182347-2	5.59572400696048	0	1.35458352703604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-112371042-4	19.0058691163528	0	1.34361421665355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106678377-4	13.3897588086146	0	1.35288531474255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25531071-4	10.5552957213111	0	1.35549321929164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-26717765-2	4.87991363947495	0	1.40084760872114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56548018-4	9.4942285930645	0	1.36382857531851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125542051-4	9.72260596272302	2.05363404081136	1.01562991460955	2.02202988634976	0.0431732644327032	0.533255051419521	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.0616452534421
Merged-chr18-39763646-4	15.9681942993854	0	1.35159439527854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9552623-7	36.5124475204076	0	1.33546654274095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36709020-2	3.85446014266357	0	1.42373191496594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31170473-4	10.764096276309	0	1.35561308302039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141562424-3	9.97814446895792	-0.550704046384825	0.694217297705127	-0.793273299592629	0.427618609550677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47759419528723	2.07776144459665
Merged-chr3-31425571-4	13.3262879741025	0	1.35601729641577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122131266-4	9.562602813146	0	1.34436881151444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4771328-4	44.083913150596	-0.209968065874748	0.277959899749392	-0.755389774079119	0.450015147094878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37015284095227	5.10486257547154
Merged-chr7-83658838-4	10.8237740574843	0	1.36661019660987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117817176-4	10.0203875945173	0	1.36187854719541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58302528-16	114.313888244823	0.360657799434696	0.190788459663862	1.89035437505034	0.0587105810578554	0.656946989650877	C57BL6J_F1_Control-BALBCJ_F1_Control	7.23768671548211	7.54699038209227
Merged-chr13-69382972-7	42.1750640447038	0.585653646322199	0.340367553828874	1.72065063116047	0.0853142399409547	0.823975657542446	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10084761059569	5.66262913845325
Merged-chr10-24823968-14	94.7471052062318	0.0198737498164771	0.266923841561724	0.0744547572078959	0.940648539715412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.28993274789305	6.18475589206227
Merged-chr10-88372732-4	12.4640526832774	0	1.36759230881261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59613974-4	9.14273757759019	0	1.34941654419636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94236893-4	11.2170634286624	0	1.38745458922304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126126937-4	18.1526694445276	0	1.34798416632883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83343341-4	12.6515668535447	0	1.36732997176586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98342766-3	12.0240848286652	0	1.36512388728692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96705765-4	10.4215323920229	0	1.34689496986324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19303961-4	17.1326333893449	0	1.37394645830061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121580091-4	7.8313920386687	0	1.3475291371499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99190941-4	9.40821801509242	0	1.3502729895704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84482068-4	10.4326032383953	0	1.34608078279563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69595943-4	8.5711847572651	0	1.35717553833473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59823262-4	9.75051081324091	0	1.39105055537517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52444143-4	15.8824232791819	0	1.36710407204389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35038410-4	14.0305882861116	0	1.34332053983347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91335345-8	41.5131961242661	1.06778132106062	0.307411649906733	3.47345756539993	0.00051379860276696	0.0218506148879896	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86240201921223	6.00914988143398
Merged-chr6-128850101-3	6.62817994885443	0	1.35450576953002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95507574-4	7.15189117344792	0	1.37948020824725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-22916921-4	11.6567045547925	0	1.35002894272283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119597868-4	14.9127603688384	0	1.36212515048028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86920785-4	11.4712213274853	0	1.35448816718856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75857289-7	53.4058513145891	0	1.33506263502819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78537730-10	124.585333864031	-0.121364057226696	0.19242955380057	-0.630693439909314	0.52824098923147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.4411557126428	6.35527291210047
Merged-chr13-55016680-8	47.5847058381879	0.132767821114057	0.320260939566766	0.414561392637077	0.678463015694902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.56454438019682	5.6548657566408
Merged-chr19-46014720-4	7.23246486990695	0	1.34909174012314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16956615-8	51.7854618398515	-0.249324200565324	0.290136909936173	-0.859332928789281	0.390156861967467	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00060730440226	4.79452937570633
Merged-chr4-3691536-4	13.4845141451718	-1.30513881028432	1.33065613152145	-0.980823504560906	0.326679785203612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0
Merged-chr11-83082304-2	4.13313131336577	0	1.49860754625885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141871562-8	56.4022732735236	0.981660863012478	0.296088737711581	3.31542790380872	0.00091502940669123	0.0334950057362482	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77742198584244	6.06212032416946
Merged-chrX-71264207-2	7.47978535334642	0	1.36542327224352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128738110-2	3.22956423091366	0	1.50938054290818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102828656-4	17.416813726433	0	1.35380723641433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45006046-4	19.4143248685014	0	1.35833038475329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93944434-6	76.7047237268844	2.08880945694176	0.355029302266364	5.88348466903337	4.01717322306622e-09	1.01096999644748e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10902270631569	6.19906198859937
Merged-chr13-112012817-5	24.7392005593238	-1.35980472886346	0.563413040949821	-2.41351305353361	0.0157995619296803	0.275625284639118	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95045521167234	2.61283681135392
Merged-chr15-50650007-4	16.3451376477621	0	1.34846679335454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25550471-4	10.5428462344429	0	1.34759460150699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127492169-2	8.91691595469127	2.86075951736999	0.888165038928512	3.22097739944957	0.00127754222198888	0.0436492254211776	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	3.78997723192375
Merged-chr2-148498072-5	19.5798515254209	0.599351884179663	0.846220132078159	0.708269469680149	0.478777932631113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	1.86575916392988
Merged-chr3-95669030-5	32.7632356048413	0	1.34372320909211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86888242-4	12.0820497819035	0	1.34912127971486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40273524-4	11.8046769906026	0	1.35570820886249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41097851-4	12.3537867372848	0	1.34153630592603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122013780-5	23.5483884266388	0.767687059848136	0.568884054764793	1.34946137691544	0.177188818021578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31598728753819	4.24957584638866
Merged-chr3-28032051-5	19.7257229822538	0	1.34276675737834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-109230999-4	6.54732250634485	0	1.38622382708459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87185907-4	32.1034694498448	1.66939327358943	0.51222358552589	3.25911051494339	0.00111762122279677	0.03911962141018	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55866154161747	5.43740882038556
Merged-chr2-65391518-4	10.9635147256955	0	1.3576966313283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112003255-6	26.3385091901017	0.677701153842925	0.924215676555997	0.733271649717429	0.463392762683006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.38572824442771
Merged-chr17-27932590-6	34.6357419225504	-0.906151194553884	0.418977978365982	-2.16276568541354	0.0305592061029268	0.428428917263876	C57BL6J_F1_Control-BALBCJ_F1_Control	4.803866944429	3.80179320267958
Merged-chr7-68692936-8	56.2696398946025	-0.464739237613003	0.318721091931869	-1.45813769272711	0.144802593723646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32093915605234	4.87133752670907
Merged-chr13-30696104-3	15.6602906262186	0	1.35137053709821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37526323-8	57.6349976916783	-0.267301715174629	0.265580304815325	-1.00648169434289	0.314183913000869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25118484975253	4.93960169647131
Merged-chr11-118459322-4	35.6597495268011	0	1.35220581657581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109298307-2	7.53261953304152	0	1.39250327075855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-20992671-4	12.7972105654745	0	1.35657432038829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-127621343-4	10.0194790903404	0	1.35110889577565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97924077-4	8.80731094850172	0	1.36820405483599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84201200-19	211.681208000994	0.0495234150825094	0.365174626334473	0.135615706873209	0.89212508788442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.25309638435866	7.30674712494616
Merged-chr1-135617532-4	8.31652296216981	0	1.35727154124827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17977030-4	10.4100330757836	0	1.35024906631565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22437689-4	15.4007126878208	0	1.34396404982578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10424558-4	9.66178772508473	0	1.38481028459585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55202179-4	12.5964599535516	0	1.34213319440461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59567340-4	13.0769283637208	0	1.34652778273717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115789316-4	15.0279068118594	0	1.35403734982933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34639794-8	50.5840876285263	0.936586585894802	0.352832480061422	2.65447950180709	0.00794308653709219	0.17188624246409	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24682062025367	5.28449969347914
Merged-chr14-102978833-5	13.6970482144245	0	1.34714627350704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46478939-4	14.206077318989	0	1.34834934727422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181917619-3	16.9430957630478	0	1.39258913272345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70990361-4	10.0017477817218	0	1.35533190739009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83809897-8	34.1930828102303	-0.32419532532916	0.315596650116973	-1.02724577465889	0.304304748762931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28895033400679	5.00278799983269
Merged-chr7-24394662-4	23.2440765669924	0.673333538269949	0.528878560703087	1.27313449305796	0.202970320877945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95705471804045	3.93441478944706
Merged-chr2-132111545-4	9.47789728668036	0	1.34882775886946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160086600-4	11.2406142885526	-1.65320029670867	0.69607958615119	-2.37501620446831	0.0175481797842742	0.294777968137626	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97283807204493	1.90216338684418
Merged-chr2-155602591-1	5.55825314431292	-2.5362759215206	1.09011779095812	-2.32660721855703	0.0199861799957051	0.320008470806047	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80505237968249	0.465515277017237
Merged-chr14-47361936-13	160.454795931227	1.23120500797424	0.230757338596109	5.33549665403796	9.52833862503815e-08	1.65479539718354e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2624085464598	7.53462070515406
Merged-chr10-62324044-4	16.5764176178521	0	1.34389084191573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60367251-3	20.2684742283257	0	1.34470991699699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90545516-8	73.1580113656477	0.135301070797585	0.419677877307675	0.322392668552298	0.747155237632509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19297638740036	4.19415935834304
Merged-chr6-5167497-4	10.5394818433405	0	1.34901420672581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87448325-4	16.0513079130918	0	1.36346301882654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45790778-4	10.5525295620193	0	1.34564327847968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-106574725-4	8.12452205071568	0	1.35437206837243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12295123-7	27.7904678678635	0	1.33725686736531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38787897-4	8.74546371992846	0	1.34290050506105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110372654-4	12.3924273662469	0	1.359890479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116531461-4	8.67356446470458	0	1.35520117397926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184618201-8	58.5806824149373	-0.0034032948612939	0.265702968451854	-0.0128086444841906	0.98978045976065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35543059468481	5.34435139971678
Merged-chr12-85123239-4	13.7015672578663	0	1.34626360428181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32478863-4	11.7610096337044	0	1.34052598073449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74631034-2	2.57743028124725	0	1.56154144789003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-19303025-1	3.94222473842895	-1.07982741927424	1.57212196653123	-0.686859825295106	0.49217106567115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03633090095135	2.24843468403287
Merged-chr4-39617044-1	2.28983602202575	-3.23240948043296	1.40843820985098	-2.29503109034153	0.021731342614989	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89255009218154	0
Merged-chr1-74435790-4	18.6852528741108	0	1.34436014520177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64485120-1	2.12408093173328	0	1.42536626426085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109861419-1	5.47131223272184	0.0234439389147804	0.842791579632183	0.0278170065783191	0.977808101923114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38713383244935	1.99561463614648
Merged-chr13-92322779-3	14.4507606678193	0.21073194270808	0.690926015006954	0.304999288101721	0.760366694517693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	2.25129509282521
Merged-chr8-70869679-4	8.50273113291696	0	1.35159266900356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98944710-4	13.3999437742141	0	1.3473032961941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37171715-2	2.55784058840557	0	1.5227077621059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64141008-4	10.615206863432	0	1.36538255932507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61793599-4	19.0744316749742	0	1.35856636320812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82122721-3	6.46448362850675	0	1.38147067209878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98357872-1	1.39207709280636	0	1.51817925391482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85885184-4	8.59462658706895	0	1.38149848438616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30373746-8	53.0085291540308	0.489443198812729	0.308073781352584	1.58872071704334	0.112123459572261	0.975656161236752	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47789115997836	5.21151836369241
Merged-chr17-17878254-1	2.08833136220485	0	1.54450545899284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78092903-1	2.70535893611981	0	1.43165794484108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93976130-1	1.13785784459035	0	1.69682485961702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75686721-4	9.45987079237324	0	1.35659352071388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109822603-4	24.512680200822	0	1.34962549232806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74430671-4	10.506520028454	0	1.34733170714891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56748107-4	23.5323860784454	0	1.35901060313681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34195036-2	5.37306955722131	0	1.38117157199683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109690938-10	69.1978373091533	0.0467650044989013	0.25982113506013	0.179989224079399	0.857161027982594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.81504952652201	5.88632063752101
Merged-chr14-50875878-8	54.8048983263298	1.30473487935615	0.309042386702289	4.22186384618187	2.42290456837559e-05	0.00183229680935592	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79283900363033	6.00057116947226
Merged-chr3-105018952-4	18.9290477840903	0	1.36106458639708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84562846-3	9.56216397077526	0	1.35128862287126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30300523-3	10.0196572045937	0	1.36110500932722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100439298-4	10.108442405697	0	1.35388112116721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155006732-4	8.64151203568292	0	1.34922725944893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101656020-4	10.6276813765861	0	1.36651677769502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24578710-4	17.1331996280436	0	1.37961771717069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59016540-6	25.1524749737318	0	1.33874324823717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25640604-2	9.23416844453966	1.75734175285	1.24610261380727	1.41027049729132	0.158459826506501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr13-100594249-2	9.42232050353501	0	1.37399400476134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27414566-2	4.02070920713319	0	1.38767239495998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32620180-2	3.31747805699034	0	1.40699977675414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55706993-1	4.70349912503329	0	1.39048121924802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52091095-4	8.65394907905284	0	1.35340593961427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56266681-4	10.0514370096371	0	1.34928784932171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25318620-6	51.3091286602574	-0.764842988853055	0.450619110507565	-1.69731591718682	0.0896369495353998	0.849176531856884	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77820357258503	3.23206064634892
Merged-chr4-8915746-4	11.3387460762741	0	1.36283248539984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127330344-4	18.545720938398	1.05405897280134	1.22421925916796	0.861005056821052	0.389235257964251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.879366456215217
Merged-chr1-152682846-4	16.1064765246681	0	1.34432848005398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109331571-8	38.8367736298645	0.304639462686566	0.314658615134961	0.968158658411124	0.332965138244716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46766812124237	4.89289332478143
Merged-chr9-72133371-5	32.4661234259122	0	1.33457130254827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149220404-5	22.4895959017784	-1.6057210662825	0.874311123199839	-1.83655568787209	0.0662755140104697	0.708768574876081	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09355669101354	0.953310774576147
Merged-chr7-75686261-4	10.2879215640429	0	1.34850912572003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86085161-8	52.7219221190372	0.937005328869067	0.315479448014312	2.97009943045976	0.00297703374736365	0.0844745633788178	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39347823902617	5.45771791168791
Merged-chr12-85389305-4	11.1683229800746	0	1.35055511653513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17815513-4	9.85570277935728	0	1.34908188977812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83266571-4	19.7253454732407	-0.794466076750362	0.499279230648797	-1.59122596731689	0.111558730922057	0.972921715737544	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29603057298338	3.23156941160167
Merged-chr14-50372767-3	13.5085803168058	2.21590765732704	0.687273785850537	3.22419929720547	0.00126325449801276	0.0432698495636268	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	3.92846701262494
Merged-chr11-16638575-4	13.8136861018665	-0.374812039433612	0.515090457932694	-0.72766255647195	0.466820176598189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97975931787349	3.51122422081808
Merged-chr10-111365291-4	12.3861598193686	0	1.37930861619032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70436231-14	117.576139903445	-0.125392604988898	0.181144256269742	-0.692225122513276	0.488795964229775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.71142880522025	6.58187287494895
Merged-chr3-88513682-8	23.6623834284708	0	1.33863338361683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104370362-8	60.7294805676688	-0.334579827622751	0.302237127010724	-1.10701101129405	0.268289167607445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31697432806651	4.92099986012423
Merged-chr6-47621202-4	15.2549043618561	0	1.35678157132753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82382485-9	50.5194383496485	-0.384377370505103	0.308135294270898	-1.24743052046214	0.212239681451487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37179596653155	5.06392324471945
Merged-chr2-150675118-4	9.66808197110204	0	1.34404979068292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118633024-4	16.359202898251	0	1.35391828135265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30301048-3	4.6089748019083	0	1.45817405438346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96552196-4	7.44469878987696	0	1.34821337832412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-7753381-4	10.3556681832335	0	1.34833243675348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70007171-3	7.34751711998639	0	1.35447305711217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21377068-4	17.3472349711408	2.380064318341	1.16592152296688	2.04135893493459	0.041215163053227	0.517895295517884	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14143228603163
Merged-chr3-126650556-2	5.11253665345794	2.52375525553002	1.21466370614581	2.07773990674179	0.0377333213352713	0.48953355953795	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.887876939341704
Merged-chr1-157141236-8	42.1564420956036	0.315984645697274	0.297677780235796	1.06149893165347	0.288463218174035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94191623028595	5.25493962901493
Merged-chr6-134115753-8	40.3713965039665	0.703144684448789	0.31576555428659	2.22679350202528	0.0259610778776217	0.385684130185744	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79345952914062	5.57168397121835
Merged-chrX-163744102-4	8.94128368186629	0	1.36859105309511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34966360-4	7.02551947097033	0	1.38256962996723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34841914-3	9.52469554451983	0	1.36266070618718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26639668-4	16.1011315366394	0	1.357756478328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70632274-3	13.6922738301495	1.6579287558841	1.33230095597713	1.24441009251408	0.213348670328142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr1-152597089-4	9.8152201687359	0	1.36067707602429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47011174-9	74.9749951720763	0.0697441898221305	0.193598719668836	0.360251296813495	0.71865921697891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.26715231470703	6.31696018926723
Merged-chr9-65364363-3	5.9562037031226	0	1.3683882624285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67188732-14	65.7904146328253	-0.338934949963151	0.307187610665839	-1.10334837146752	0.269875908004946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90899188137605	4.63227862074017
Merged-chr14-30631240-4	13.8080709088935	0	1.34863307066058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24572811-2	3.48451724296319	0	1.43913389187071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76802113-4	10.0395837626746	0	1.34310023129228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35559263-4	9.44144141183385	0	1.36131153009117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103842557-2	5.35502995413035	-3.09807800019981	1.21159049042769	-2.55703393570396	0.0105568918041539	0.208525465691134	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	0
Merged-chr2-168539255-4	11.2377857320364	0	1.34887342996818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56315364-4	14.0540383365069	-0.487638390196304	0.73740190074903	-0.661292559323451	0.508424712277017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	1.00114351279961
Merged-chrX-103529402-6	26.5443603891371	-5.19629825648919	0.979369586581969	-5.30575824252868	1.12205589675212e-07	1.89421852458225e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58223914515412	0.413263464506793
Merged-chr11-110538413-4	14.0578326967795	2.11894984017453	1.19539404469365	1.77259527900489	0.0762957945802636	0.77160243676066	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr10-44858870-4	14.3101406400063	0	1.36906218303146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50711541-3	13.954203120167	2.7174034821627	1.13285057135916	2.39873073365928	0.0164520077571245	0.283369673532805	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.44790810950236
Merged-chr6-21955009-4	10.642034156145	0	1.34968059801258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69144520-4	15.0756581403621	0	1.36257683565011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118038567-2	4.26149921233603	-3.081773630036	1.20107943994461	-2.56583663623293	0.0102927291385097	0.205246684974412	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90927269178975	0
Merged-chr10-99247315-4	9.97803078884221	0	1.35712041690704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120325883-6	45.8512390529326	0.509171301562817	0.447175230907916	1.13863932161231	0.254853620658132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48110925856644	3.76016365218715
Merged-chr13-38193039-4	18.3716328836175	-2.39918914803493	0.520049038051857	-4.61339022378056	3.96153536809832e-06	0.000414125194373955	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25337580344242	2.94002263438064
Merged-chr6-145341949-8	44.5486076128792	-0.0116209204003846	0.254859463377342	-0.0455973666678358	0.963631168085639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04959797206331	6.04507733669315
Merged-chr4-138024831-3	14.2976815954995	-1.3933120928668	0.635899809497749	-2.19108745128777	0.0284454646407235	0.409785694448083	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40622887944214	2.00766992357472
Merged-chr13-107101775-4	12.3161557809865	0	1.35641856682698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57980876-4	9.86023196689425	0	1.3589366228413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69320944-4	9.47868604123811	0	1.34795870398264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24595897-4	18.088824818629	0	1.39434559249631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122935030-4	13.0691714294118	0	1.34969420344357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21953622-4	11.0439169791886	0	1.34543267950654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101907436-4	10.2868488698471	0	1.35197886281568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20140196-5	27.3678007841486	0.165466377312639	0.70187438436074	0.235749275083381	0.813627231344275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.993458951033742	2.1881845164991
Merged-chr13-56352643-9	92.304098333529	-0.417609713821611	0.230966719070324	-1.80809475712585	0.0705917540476049	0.735549576454872	C57BL6J_F1_Control-BALBCJ_F1_Control	6.45852878723244	6.01599786494556
Merged-chr4-89351690-4	7.33786003031853	0	1.37273094679634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132983220-12	90.6369184279752	-0.0862455332171547	0.256753713649014	-0.335907636900059	0.736940517936092	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64056203820933	6.55720264636381
Merged-chr2-18649098-4	9.15732415310766	0	1.34764495497031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-93127075-1	3.0866826966368	0	1.5707213271316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-88459044-4	10.4144919221426	0	1.34982874591022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116865619-8	50.5960196519005	-0.41781274330122	0.33589686107499	-1.24387212778372	0.213546628964985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79596970722765	4.25339916688668
Merged-chr14-47533840-7	49.652255726941	1.48714825752998	0.31165052561651	4.77184581860752	1.82545224285836e-06	0.000209788072874287	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03140789374975	6.68426237854369
Merged-chr12-73201818-4	10.7119853528792	0.907540078155015	0.995563137497729	0.911584653923654	0.361987403822873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.44790810950236
Merged-chr7-100431293-8	60.5018921715762	1.46332872270136	0.296537006508192	4.93472548311079	8.02635705871771e-07	0.000106937437096773	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16240427663388	6.65643014686172
Merged-chr6-125509950-5	31.6263517596915	2.64944436958829	0.369815256500872	7.16423761057584	7.8220631218272e-13	5.24937690419018e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14706260651765	5.92722593786167
Merged-chr9-70761211-4	8.71446438205499	0	1.35454705694679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81432921-4	8.5545604193445	0	1.36465522556741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48817490-8	53.1404343308459	0.109735858767575	0.26217567480744	0.418558506040549	0.675538820040432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48299527079081	5.57398449679142
Merged-chr6-82045306-7	48.8449091466828	-1.04859334454075	0.350669232309494	-2.99026332488526	0.00278737042398768	0.0800415577800034	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19002552548689	3.79107559058199
Merged-chr7-31131072-8	26.6488641458571	-1.07466630828368	0.392781286578003	-2.73604253819322	0.00621829871282318	0.143323371454419	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17244350162826	3.79102123825195
Merged-chr1-9953117-4	11.7905178387102	0	1.35074528052284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53059236-4	12.0960753765531	0	1.35761400564872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105971943-5	41.9502143422838	-0.603971674375078	0.519698135336464	-1.16215863269175	0.245171034511849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05445496320943	3.06066185834148
Merged-chr1-55488508-8	48.0958763552875	-0.353333452123681	0.286165433141834	-1.23471744383801	0.216935681487395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29280190923873	4.91332084049056
Merged-chr16-59617384-8	48.2399557094165	-0.310911467180975	0.306753606199807	-1.01355439967822	0.310795425969385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13477096446261	4.83915068844565
Merged-chr11-11762257-4	12.1837356225994	0	1.37095807615007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8776154-4	16.2886759907183	0	1.37837334569029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56272418-4	10.1536375578896	0	1.36453356186819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69655621-3	9.99317978839022	0	1.37464610777806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95797772-4	9.75033864264315	0	1.3489819402035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191639633-2	6.91338391646449	1.20805900236452	1.36166675081631	0.887191378977491	0.374975873090302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr17-86978683-4	11.3148040376558	0.748219517089488	0.911620294806926	0.820757854286203	0.411784209374261	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.32471430176536
Merged-chr3-61393150-4	17.6476703305585	0	1.35002102587039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111731944-5	28.9904955297052	-4.85842050156013	0.92665553036223	-5.24296282962987	1.58018381730069e-07	2.57949585959904e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93973986331528	0.679405493272835
Merged-chr7-16043618-4	9.75092176122546	0	1.35153056388929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27937745-8	50.173335528332	0	1.33364416798033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-126836867-6	23.2143392597418	0.274925637932778	0.485808907256625	0.565913127211457	0.571452837339704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36497541999394	3.57575139357995
Merged-chr15-88101533-3	17.5105083561282	-4.8040338703245	0.736130843055607	-6.5260597564197	6.75223903901311e-11	2.65974610088198e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00657640012291	1.18984215491549
Merged-chr6-66973301-4	11.195302570531	0	1.36171847473692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42436153-7	44.4826469902527	-0.146974327724472	0.259497146577171	-0.566381286511616	0.571134613213412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.43292377663559	6.28784876866221
Merged-chr3-144693279-4	13.134498807853	0	1.34804666570307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127922551-4	23.0803222515997	0	1.35059506116821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87675179-8	36.5386312598965	0.360875656370227	0.296404957988723	1.21750883932231	0.223410675360435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81000532612847	5.16547593165262
Merged-chr7-101028717-4	16.3996161999359	0	1.35903607837195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6074094-4	8.73213998812989	0	1.35290744529234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29495865-4	13.5564239448415	0	1.34316852302547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137302745-8	53.77668851355	-0.242090342659252	0.317762290950269	-0.761859885687758	0.446143633852884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20058114349849	4.95824004239588
Merged-chr4-150136913-4	8.14924783294847	0	1.35498702524457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35777072-8	85.9715055398168	0.244574537038692	0.289950860023853	0.843503402675104	0.398946963532993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28135909394866	5.70841515595691
Merged-chr4-137622253-1	6.0235129297124	0.738874904092004	0.725701630866465	1.01815246468416	0.308605505688411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04607318663426	4.13722142293504
Merged-chr9-85352302-1	1.79212567055675	0	1.58565889292211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127508188-2	6.05469374150849	0.745856668064348	1.11156552419051	0.670996582596884	0.502222706574936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	1.62805269464997
Merged-chr13-37894398-1	1.91271340599976	0	1.488902686741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45106552-4	12.4782469486684	0	1.36747116178164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44371277-1	1.67885852848035	0	1.56435320772717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108820741-1	4.48438811263648	0	1.41035575388965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43304272-1	2.51937637113872	0	1.45192441125822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145019285-2	7.11222757724067	0	1.3841227953822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33337360-1	3.04671912050443	0	1.51630200760345	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25546106-1	2.89902554016549	0	1.43659265677212	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58742870-2	7.40576826238346	0	1.38983623125303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6359822-4	13.5439178203557	0	1.35867521138456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149280964-8	31.8086958950272	-0.734149903304651	0.342723198843481	-2.14210740849187	0.0321848398863912	0.442696283245026	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35606304749126	4.67172351070423
Merged-chr13-64252323-4	17.7863526423358	0.560828942486513	0.736388827834171	0.761593496924708	0.446302657295155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57964324217899	1.47751579018518
Merged-chr10-60369603-4	9.9114946452727	0	1.34720886449388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25128152-1	9.21530428008707	0.150411564336556	0.816246663462796	0.184272194998579	0.853799925568854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65421415838646	2.75788269098555
Merged-chr6-108277135-3	4.82485586748925	0	1.40599235206172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60516447-4	7.91269131877911	0	1.36670655525557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80874352-8	54.0248942867327	-1.13742654167467	0.25354707715172	-4.48605661107284	7.25534714545199e-06	0.000676489563429888	C57BL6J_F1_Control-BALBCJ_F1_Control	6.21355991503567	5.06832731069351
Merged-chr13-99337649-8	50.9958401657548	0.335835483205125	0.290911158860763	1.15442626718167	0.248325451317584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96747129307304	5.22376723090767
Merged-chr14-64753577-2	7.25625258880375	0	1.38370078550309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117881148-4	14.7499748987054	0	1.35482701848416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84709329-4	8.03713549839208	0	1.35680097316158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19203164-4	15.0651727532621	0	1.38337051014603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-129995216-3	6.98743978235143	0	1.43159981654172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75571318-9	113.497667960959	-0.0909321858880856	0.202054609009268	-0.45003767216176	0.652683277145993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.12273800660788	7.02880157129792
Merged-chr8-123251158-4	14.841891748845	3.32664817779587	1.07667704457497	3.08973632767392	0.00200334256929831	0.062406704140107	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.02922356684558
Merged-chr7-64048551-5	22.0078965190469	0	1.34172017445582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86477021-4	7.98812940560559	0	1.36439333382379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76897952-4	11.1693083390773	0	1.3566120788849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-95924712-3	9.56165208835491	0	1.35893043480921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119357085-4	21.8976876761259	3.20935570599849	0.458958704402784	6.99268948428517	2.69665928083841e-12	1.42318157133102e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43305732527509	6.01226353446881
Merged-chr9-64105465-4	13.0675146076665	0	1.35081222536195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121851021-8	43.8812127774172	-0.164741435661802	0.387615693609771	-0.425012295368138	0.670827711640316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38291293681527	5.17037460633454
Merged-chr14-54733684-8	64.7791789346211	1.17356499523471	0.260541090400159	4.50433746720049	6.65803321517551e-06	0.000628340325596746	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06993864352034	6.21783211663272
Merged-chr12-85533819-4	9.43514333493929	0	1.3491940492547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58978301-3	21.3366913169863	0	1.35326323154387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90234042-4	10.6421766745198	0	1.35137611374257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32180333-3	8.5039916629146	0	1.35663948068891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75668081-4	9.36468572286087	0	1.34694161752128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28823651-3	10.020448070839	0	1.41990864217263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59454253-3	5.09063256685972	0	1.41863991189448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89575655-2	7.61612693068883	0	1.37506382016248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70653466-8	37.8848274525103	-0.10968514739254	0.302169750290453	-0.362991819290675	0.716610995414563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52151576968227	5.37642911006785
Merged-chr7-35750953-12	54.6161753918679	-0.471440130130164	0.312342156890182	-1.50937079651377	0.131204051735622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13354678494146	4.98244488623112
Merged-chr5-16541931-4	11.9850981449737	0	1.3569714603305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17865338-8	44.7342439126171	-0.429679091026172	0.278089345604703	-1.54511166219561	0.122319256583153	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17255458235984	4.78360787401027
Merged-chr17-17392950-8	39.008902568708	0.63652677629706	0.345515649308079	1.84225165364218	0.0654383480081719	0.703831254328495	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01839831038695	5.56827958821329
Merged-chr16-93084915-3	14.6310903935001	0.0734310545329056	0.533024715979074	0.137762944815843	0.890427770812655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71594332969903	3.04588419511297
Merged-chr1-135735474-4	13.1632600193488	0	1.35591771870486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42244554-4	28.0186615531593	0	1.35928536272203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90052362-3	14.6980410423323	1.62274766107697	0.735960903120413	2.20493731962751	0.0274584932527928	0.399629513983552	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05916644618774	3.72799262898415
Merged-chr8-126901299-2	4.82975378625614	0	1.38251162869871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57790742-4	12.5673392644501	0	1.35605079639659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52502926-8	53.7522150305517	-0.612184853798254	0.338107679575251	-1.81062096716441	0.0701995443006626	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93978357180357	4.3010186404531
Merged-chr6-143225088-2	8.03278729614543	0	1.36263902498349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-114382372-1	6.27051603583037	0.126576245926427	0.819595252995721	0.15443750493158	0.877264783713136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92968630254835	3.27866420966827
Merged-chr10-44755494-2	2.51286700565468	0	1.54581459074858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-28463944-2	5.62245188519137	0	1.38553840686199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23008414-4	10.2760354783386	0	1.35160650679188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64637595-4	10.2669083064294	0	1.36501993384465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97294481-7	43.5365149652503	0.63795937555889	0.59367840889077	1.07458746352399	0.282559467048709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11480110409737	3.16740988154697
Merged-chr13-37600242-7	34.6416074010067	-1.54189938823657	0.719712203506479	-2.14238327587659	0.0321626525572666	0.442615096293786	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70235009098418	1.32509503823899
Merged-chr12-12289859-4	9.1174350882391	0	1.34720691114898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67194024-2	9.85706584300928	-2.50517227915207	1.18489363415771	-2.11425921022261	0.0344931341786149	0.464111950696864	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0
Merged-chr17-71684434-4	11.2303994715377	0	1.35242579790673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76691013-4	13.4722458576227	0	1.3731049450196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27234680-4	9.81747788123488	0	1.37187112995126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31253395-4	10.7164379659835	0	1.36585523568047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133163879-4	8.16986157530859	0	1.35781963575805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130129913-4	16.069648457458	2.17807648693495	0.5344160072576	4.07561984924803	4.58919384134046e-05	0.00308742559432458	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96948545381398	5.19384289492842
Merged-chr19-40641063-8	48.2527369990491	-0.347524874376051	0.314642530445971	-1.1045069904678	0.269373272856926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68877320733712	4.16976861038467
Merged-chr8-122557900-8	39.8320771161525	-0.287982354591379	0.339045297451327	-0.849391974335586	0.395663217484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38315853932763	4.87732840544237
Merged-chr2-49554930-4	15.1410781368633	0	1.35262903537611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31081177-3	6.02820372272924	0	1.3863811228994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46357089-4	10.2844932635252	0	1.35160419451262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84363004-4	10.8600866225894	0	1.34455545113199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40678845-13	108.890199354905	-0.175228583785245	0.243482123779856	-0.719677408201338	0.471723639206927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.19461622226055	5.99768163578892
Merged-chr16-91477807-2	5.38158488106379	0	1.39616911868705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83605208-2	6.53381040172782	-0.0355029599822754	1.42420539433888	-0.0249282583280455	0.980112187348013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.303163067301871
Merged-chrX-93889228-2	6.98749696955646	0	1.35450266853373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85495546-1	3.57296139206497	0	1.44049489562368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108716350-3	8.59105346166022	0	1.35320193598276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53007659-3	13.8542646091143	0	1.34408643414585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117241232-5	21.5043825860287	0	1.34158176233203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71827204-1	4.08652958209674	-3.03797501915597	1.280412788358	-2.37265282475963	0.0176608553431035	0.296022193333029	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	0
Merged-chr2-166980313-4	10.7684964132626	0	1.35146311582133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101020183-8	54.4403346160642	0.313758712054701	0.379823272945783	0.826065000233642	0.40876722046346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87815911575309	4.90725258045869
Merged-chr5-36549445-10	56.9066144728981	-0.16030799729387	0.240122735609326	-0.66760857478605	0.50438348274391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24183925996649	6.07859636597293
Merged-chr15-25835108-4	13.7552321710636	0	1.3491148074471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-14880529-9	66.8862520307208	0.172966434158562	0.243317921411735	0.710865986175649	0.47716728546481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05962129573328	6.25771353296916
Merged-chr11-118148086-4	12.783889273602	0	1.3455496940531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113782811-4	8.45658509654628	0	1.36555396779623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150831260-4	16.8182791505892	0	1.34176241869677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34906929-4	11.184009527	0	1.36391084694953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61908663-4	10.278565476323	0	1.35145807977343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97478830-4	9.70380663903493	0	1.35268958240808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112298364-3	6.96885985468133	0	1.37578352920957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56443407-3	8.85337044889201	0	1.36233399505499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78315955-4	16.2770205030565	0	1.35583460594858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65484116-4	11.3063082092147	0	1.34483880373513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16335467-4	25.5136515019728	0	1.35454673836692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24725974-2	6.93843832615067	0	1.40950617871503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27579461-4	7.65693976083763	0	1.37073973481185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182951506-2	7.92292167359451	1.12005415829515	0.733219418985507	1.5275838709303	0.126615888860766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	2.54635642558252
Merged-chr17-10848979-4	8.68583962034204	0	1.36369434896944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-157476404-5	13.403084428612	0	1.35711662936966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56071002-8	59.8610843334305	0.579260912565613	0.300249999944999	1.92926199058026	0.0536983458463873	0.619479707526267	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71611829265874	5.3162737567316
Merged-chr1-123606259-4	14.760399790361	-3.02561988479008	0.699926298993107	-4.32276925319515	1.54082862485147e-05	0.0012614142050949	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15893776852525	1.5682414637086
Merged-chr19-6408935-4	19.4462245271461	0	1.35229307454424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38373304-4	11.0510064497483	0	1.34309161801198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123832525-12	85.4910802816893	0.779146651532243	0.210962033398475	3.6933027188857	0.00022136025108852	0.0112562412431439	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06863899194634	6.84236514132732
Merged-chr14-55730291-4	11.6527587465807	0	1.35155333061844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36359310-4	8.45086966544809	0	1.35399017153425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61774368-4	14.5132267172452	0	1.33957865541367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80554645-4	27.639948093638	0	1.35076030281556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83906864-3	7.81864568142491	0	1.36839697661649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130488720-7	47.7478550647647	-0.0420426272855961	0.368530852930669	-0.114081702932768	0.909173026465767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24248081902944	4.2240800878584
Merged-chr2-84382191-8	33.0612785881616	-0.858079385366667	0.317043749697093	-2.70650150392962	0.0067996274405284	0.153003286217648	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73453009360688	4.754846078379
Merged-chr7-63755737-4	8.14234498518829	0	1.35136042329679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88802438-4	7.85714317415871	0	1.36211797747828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8705100-4	8.59394354082155	0	1.34597279984874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3923035-4	13.1363163684391	0	1.34693756198263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67444790-3	13.3152159646384	0.261891121557211	0.520649461533097	0.503008532431879	0.614958273256727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25396805794692	3.51794678840676
Merged-chr6-134274094-1	3.27246186991025	0.612969205766247	1.48219136826522	0.413556048760207	0.679199266794426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr4-145261508-1	2.24212754730615	0	1.49210546912702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191878961-4	20.7449421545354	-0.580689505951987	0.519727499188635	-1.1172960962399	0.2638677440762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08406591029688	2.98329758132862
Merged-chr11-96874986-1	2.0763461215285	0	1.4790155017503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49007102-4	12.000977876582	0	1.35387568901708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43969534-2	2.79184401178263	0	1.59623972696412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131448593-4	9.8822783577799	0	1.35201133683346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73592551-1	1.87821287825152	0	1.45831675871446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111771525-3	7.40899779927198	0	1.36966335738148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95662514-3	5.6374648705447	0	1.38926642415171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-56088857-1	1.62583091979382	0	1.55519545529703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44225909-1	1.82083974492818	0	1.48266135292186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87524459-2	2.41494937413273	0	1.52371458356445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34681154-3	11.5177488414439	-1.9630177407187	0.930647053420235	-2.10930420238734	0.034918332299488	0.467604506539613	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09157224416565	0.723581231604105
Merged-chr17-28750453-1	2.86401224133809	0	1.45656107489914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21935670-3	9.86262575357815	0	1.35295445167969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66333444-1	2.02872984890657	0	1.5484613840205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29772220-6	23.045626008453	0	1.33601831391313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102977393-3	9.03480987824047	0	1.35002513703919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80739091-4	15.9854341271963	0	1.35310361187284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43365493-4	10.1334812361279	0	1.3412073564089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17669609-4	9.22772200678613	0	1.36145661301129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143287458-4	12.0888340220979	0	1.35978141933632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41974294-4	7.03980975745934	0	1.37008815926992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31181407-3	6.10711918590075	0	1.38597094219439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32580694-8	61.041160988362	-0.130659961117618	0.290068609661434	-0.450445021507577	0.652389588209686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33158968515074	5.25766059091436
Merged-chr16-65406147-10	44.2706581040147	-0.183210393831997	0.293126836692282	-0.625020881402022	0.531957353264608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66401342631321	5.28883800132907
Merged-chr12-34041143-6	24.1156308574403	-0.879740751235832	0.579446219664645	-1.51824400846895	0.128952896992179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37566223165822	2.42153332471713
Merged-chr12-25092633-14	123.934516943133	0.0039490730889239	0.197243818224053	0.0200212768363573	0.984026399505529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.47141272412541	7.44824714841596
Merged-chr17-23967018-16	166.908717449586	-0.0722248361007822	0.170428425865215	-0.423783976963455	0.671723364647431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.18441245661218	7.11724083464755
Merged-chr13-89828641-4	15.4396540577654	-1.83254928859967	1.24540255185462	-1.47145136796988	0.14116909027218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr10-112138771-4	11.4993507335531	0	1.34845397817685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113649556-4	12.0616434023014	0	1.35733612895886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36375574-4	7.19121748620088	0	1.37243485144156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164136126-4	10.1939712573834	0	1.34669749922609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50974005-3	11.5368753623954	0	1.34889011282697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93401770-4	8.25867461605897	0	1.36095994897071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7972140-4	14.5068799328702	0	1.35344775059604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81430577-8	49.3597978033513	0	1.33441030544451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78931796-4	11.6589942301534	0	1.36320909155234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64438897-3	11.9932895713883	2.75861372382909	0.917576713257808	3.00641208955137	0.00264350478591832	0.0770500142936912	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	3.26151516649252
Merged-chr15-99400840-2	7.50162003314133	0	1.37745457432582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-111015106-4	7.8862818986522	0	1.34634909550267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54398835-11	80.00417651348	0.048555343265369	0.202387017814997	0.239913329370532	0.810397447255187	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.71704102047483	6.75811817650224
Merged-chr17-87156379-8	60.052198206698	-0.816019155401432	0.313897374997023	-2.59963676156633	0.00933224842125814	0.191393688241419	C57BL6J_F1_Control-BALBCJ_F1_Control	6.46316071984128	5.49424786562388
Merged-chr3-146352381-8	53.331993057548	1.04586349836083	0.310448567079177	3.36887848509249	0.000754746949785175	0.0289122172140123	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88097181678031	5.99942742924895
Merged-chr6-129049267-4	9.87027330703543	0	1.34956906854969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94443420-3	10.3054060913307	0	1.3528003417845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25386298-4	11.2315188423187	0	1.3565327291232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61812021-2	6.6694019227717	0	1.3998939312955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113643098-4	19.3295651565628	0	1.40076475000985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41290021-4	16.3182352025781	0	1.33854121176235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92107481-6	22.9792792491262	-0.0705546828357073	0.438552273547922	-0.160880896283844	0.872187208853838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04582676502243	3.97866057523962
Merged-chr9-114861633-4	19.60879048011	-0.520028886033426	0.671939012491295	-0.773922746508432	0.438976477291199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57139917454706	1.99358654727727
Merged-chr9-99107877-4	8.28872589695616	0	1.35356719459207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24355560-4	12.8074154671948	0	1.34671364858779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150545077-8	49.66980454001	0.103942524131914	0.33119409896448	0.313841715347295	0.753641259619843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31976336970706	4.5461181733014
Merged-chr8-72583279-4	23.5105451845115	1.94692758818607	0.543047029854525	3.5851914864678	0.000336830973659877	0.0160190681515112	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42594657933142	4.85814496205969
Merged-chr2-166293226-6	22.9326164609463	0.121582429278737	0.462067888259461	0.26312676636483	0.792452874067502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16190355963277	4.3245932563856
Merged-chr19-17253049-5	38.6294963495675	1.77840051569072	0.417489152744225	4.25975262830424	2.0465327304019e-05	0.00160068306031535	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69945035786123	5.31022329544809
Merged-chr19-41989979-4	8.88150510972675	0	1.35592803164504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88705367-6	58.5733739860314	-0.565079558642888	0.459162239651094	-1.23067515105832	0.218444385437269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51377558193557	3.91059515080882
Merged-chr4-145201632-4	9.70657463683956	0	1.35896082115279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44910312-3	7.01575589015534	0	1.37770334393967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64720758-3	7.32010398283317	0	1.38663377262743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8867758-2	8.32285966787152	0	1.37005031699857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105248280-11	57.8484469360897	0.34770017040096	0.328719663694798	1.05774070979759	0.290173670018704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37181080578773	4.61280378124342
Merged-chr7-110179393-4	7.98127634740858	0	1.36418314490777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150217267-2	6.56722091236099	0	1.35426753875809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3406840-4	14.7537225168044	0.529009181392703	0.689842463196992	0.766855056937309	0.443167697473515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	2.50093563380008
Merged-chr1-85987445-4	12.009684172668	0	1.34293635114423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12224575-4	10.348492534916	0	1.34613254251585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13561400-3	7.31499959212483	0	1.38130010616448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99101933-8	46.262551021031	0.0104109990449602	0.277663952943305	0.0374949608496207	0.970090357982814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41278435326285	5.43182682283075
Merged-chr5-31758942-4	10.4827390002408	0	1.3593837238366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80128778-6	17.5085857934448	-0.035229658594938	0.611222207375843	-0.0576380540003435	0.954036937334814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60978507060531	1.59708520306594
Merged-chr12-25393947-8	43.3606801050963	0.809358294439033	0.391602213183788	2.06678682395286	0.0387542455772903	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47589611298469	5.21433156937842
Merged-chr10-20771505-2	7.96225791470651	0.0582615871997359	0.742903981663359	0.0784241148759069	0.937490691705306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38551848038378	2.62375345084918
Merged-chr9-83555761-4	11.7036165841935	-2.19643855219808	1.19363567307996	-1.84012475643474	0.0657499234759973	0.705507321403817	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	0
Merged-chr13-107935151-2	6.12069854254862	0.488550978626665	0.91229293046904	0.535519855859767	0.592290431173279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99642079673038	2.40161060865401
Merged-chr5-19970263-2	2.36007891291694	0	1.6351019610596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97343111-2	2.32837415666698	0	1.51361221637198	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37748152-4	12.9613026362673	0	1.35047618533121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120114811-2	4.16969486968071	0	1.39482041729944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19166453-4	8.83248826851383	0	1.35244579473114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118230156-2	5.7492764315934	0	1.39008356177549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115690517-4	9.20914605494008	0	1.35146576274555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96214099-4	11.1343438332603	0	1.3481270795725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61267431-4	8.35598805405962	0	1.34717155489981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105408234-2	4.58868553459922	-1.35444388646022	1.42731653568008	-0.948944296938916	0.342648943447956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr17-56814547-4	12.9643060430218	0	1.36060545518437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53543584-2	2.19435681215837	0	1.53294808999779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122653463-2	10.7994700796976	-0.780604600181192	0.680622241871616	-1.14689845873188	0.251423589772131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79785788760542	1.68580115571326
Merged-chr9-24512044-5	24.9540964903195	0	1.34661256597033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152019315-4	9.29636507922873	0	1.35318980892828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145859529-8	36.0803019316078	-0.12916545162896	0.311015259759362	-0.415302618041627	0.677920384921899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21701156531401	5.03747972873517
Merged-chr15-27715537-4	8.98888961061071	0	1.34907313342413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106704140-4	9.2617177379068	0	1.35928372756644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58503797-4	14.4567101789001	0	1.3504758502397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60946833-8	46.3367080672594	0.232430096641833	0.313417944974477	0.741597921780645	0.458330983075475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76271988018267	6.03908461675163
Merged-chr1-40410071-2	5.41593362700186	0	1.37772756790377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141308812-4	12.1651785476656	0	1.34631787325052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12440500-8	53.636444173478	0.167181534087329	0.29200033258808	0.572538848177169	0.566956975019921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24695341407493	5.41012154559974
Merged-chr3-51228245-4	10.8787186592563	0	1.3531237590097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127578190-4	13.2980978979655	0	1.35994756148209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181846026-4	8.93598283470982	0	1.35945180134714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52825732-4	18.0764578232521	0	1.34617283895964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60877963-8	38.1469290606471	0	1.33429566428743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83134885-4	13.393239868473	0	1.36028883506088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102090795-4	10.1346652554855	0	1.35831261593251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116491274-4	14.4428990056869	0	1.34647937223683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74348488-5	29.6085243517829	1.22062461308044	0.57091890824135	2.13799997768585	0.0325167450456328	0.446132696601604	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69735600200997	3.53709029453599
Merged-chr11-67047373-5	15.3364532199332	3.96529314128541	0.807738252500717	4.90913130461392	9.14807142934877e-07	0.000118682581104527	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	4.60411354198258
Merged-chr16-62857697-4	14.3803475397098	0	1.34278299115254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151599052-4	10.7535317220657	0	1.35434595565637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23357534-2	6.83006224679173	0	1.35792612495108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-15799124-4	9.24885662456106	0.489052133610401	0.937823403175765	0.521475719153858	0.60203541585684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	1.60310561942228
Merged-chr3-94595940-4	15.5791326165282	-1.8195587020961	0.930607177814724	-1.95523819875196	0.050554961863123	0.593802327553479	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11197723984608	0.67591700901439
Merged-chr16-4782688-4	9.53979977748737	0	1.35559963891246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44351462-2	6.18677787257323	0	1.36407441694687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36531664-4	11.7798102625701	0	1.34547630984063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131548723-2	7.52389683463533	0	1.35763127870974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62613870-4	9.39387596576868	0	1.36045874001725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38189640-8	60.192465895532	0.0466087935452736	0.345025011896922	0.13508815864978	0.89254217238607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64812201800633	4.58921175115255
Merged-chr9-90021620-3	9.63272903105522	0	1.35010379270158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100925793-4	9.56457850377952	0	1.34999394156388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8822719-4	8.11753712501246	0	1.35288484820776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40469176-4	14.5302396526045	0	1.35877297131849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-75458352-4	9.92274084783949	0	1.34904782642508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23699937-4	12.0969449834035	0	1.34627568917106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-12909665-2	7.79337009562088	0	1.36594974256218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95307302-3	10.106492954076	-0.0155741699377163	0.762608244942071	-0.0204222417486443	0.983706541199577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72585446146488	1.77084107379543
Merged-chr12-3874371-4	9.51418206280112	0	1.35124343712765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35777909-4	13.5612256835269	1.01149616888269	1.29768162709486	0.779464044002181	0.4357064101976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.577068348605183
Merged-chr3-153571361-5	17.2218629320768	0	1.37232445051086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83657008-9	39.5859663786462	0.777210015309686	0.29287559206141	2.6537206799627	0.00796096956625867	0.172192039388313	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76044651936856	5.55171920736809
Merged-chr11-100369993-4	10.8515349783942	0	1.35212339910085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108134916-6	22.9709902486439	0.138553235293472	0.570089241817242	0.243037800278099	0.807976114777186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31205403547308	2.28824474807352
Merged-chr14-52133847-4	12.0804726299615	0	1.3449869723895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87536303-4	10.0842592968789	0	1.35411539010263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-111055385-3	15.2147317431975	0.244202234159032	0.800900608688497	0.30490953747547	0.760435051591738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	1.62355329225066
Merged-chr4-145300281-6	23.4686688352782	0	1.36002546997931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131446738-6	27.6226025293261	0.0410467808103824	0.3848451603123	0.106657910877905	0.915060374321356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14566045259648	4.17734130613292
Merged-chr2-57297676-4	13.3588989766295	0	1.3638631569362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65505960-8	92.4200206241296	-0.869353579380572	0.303116760936384	-2.8680485259046	0.0041301218210574	0.107937159649451	C57BL6J_F1_Control-BALBCJ_F1_Control	6.87866293902189	6.05886133547952
Merged-chr17-31060879-6	15.5060151238064	0	1.34030180497275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13574439-1	2.3508052656935	0	1.46420631021291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82807279-1	2.13009837587189	0	1.45234075068012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75720354-2	5.14781983750852	0	1.38438154865417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56455922-4	13.9473911879999	0	1.3497131756603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133626729-5	21.7942725891494	0	1.37093005241765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10335505-1	2.99008915321027	0	1.40132992944547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34957020-1	1.86389464008351	0	1.47550660511948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114894949-1	5.49990397562942	0	1.37558303076936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56278320-2	3.04897895030488	0	1.50356147475405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55934804-1	3.00191897271146	0	1.45492942310499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146158533-2	3.82978940785993	1.7291239114435	1.29136070419159	1.33899374964019	0.180572707693661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr2-128833192-2	2.82527525575934	0	1.56812965497568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-77057011-1	1.54714230212815	0	1.64111250477364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21421791-3	7.12911877899933	0	1.37905626324653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-49995377-1	1.60416091985686	-2.91239494651385	2.25708913659606	-1.29033226880267	0.196935317600883	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr1-34867413-4	12.7648890395497	0	1.34936020679919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115814241-4	10.1893676069568	0	1.34866299490472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98255178-4	11.0846416621726	0	1.35142499983654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106573433-4	10.8147570881501	0	1.35813328382746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62760243-4	8.45659303814332	0	1.36365348378242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14233202-4	9.80848825367555	0	1.3573900150126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60937500-4	10.2267311508721	0	1.34296656665633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52500070-4	8.72123026637071	0	1.3512923157594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84015442-2	5.22411180446295	0	1.3765105823501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133412988-5	25.9218686922883	-1.67230639351929	0.388551688972718	-4.30394833166382	1.67780808624334e-05	0.00135518528618279	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26045544538511	3.81322523748531
Merged-chr13-92804507-4	12.0295567695201	0	1.35853723608836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123936810-3	12.0688482423159	0	1.35513113358987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145149241-8	33.0287966213186	-0.0876373524191289	0.324767710561468	-0.26984626109418	0.787278531291578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11518556416038	4.99948389991261
Merged-chr19-12011805-4	16.8099736088682	0	1.34139588537873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11929556-4	7.46351270751226	0	1.35793976852977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37778132-2	3.52647274516846	0	1.39800883183207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90208868-4	9.51975333770192	0	1.35566696310121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49276211-4	10.1399095709695	0	1.35087005274702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86618757-4	24.5601932088611	0	1.378423476551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66375076-4	10.3735150790937	0	1.34841599340998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121842127-4	15.9303400645687	0	1.35093539875417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136675921-4	7.6191760788655	0	1.34795242981363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80641988-4	13.7578796121173	0	1.36223106488582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127289454-1	8.14225791984374	-0.116915180184647	0.725939191812244	-0.161053682599473	0.872051119855224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47843137798393	2.96884436916809
Merged-chr8-26076311-4	11.6333050305254	0	1.35219560702125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26957209-4	10.6917010273988	0	1.35063531595941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53563145-3	9.97158836912956	0	1.35406031220455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51118878-2	7.42884198819105	-0.705401984909639	0.687694187016567	-1.02574952388342	0.305009664106482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88854826306555	1.46460328489499
Merged-chr12-73773119-4	6.59784398467019	0	1.39011752244415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34253716-4	16.2685764681689	0	1.35547275081176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13544221-2	8.13818077517975	0	1.38499615509109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10683299-4	10.229092299297	0	1.34807934544532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117776109-4	17.8093352223901	0	1.36092495573127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30749732-4	10.7845861337981	0	1.38389029208934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122614954-8	34.3771913517882	0.263496084090088	0.351108543708548	0.75046901823276	0.452972276548501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28082501190127	5.55170486132243
Merged-chr8-68886900-4	15.5391504451419	-0.842523370308722	0.829189736480453	-1.01608031701509	0.30959114122405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16596752412581	1.19182800327718
Merged-chr17-86732289-6	21.7891420836776	-0.567135157600536	0.558683152283301	-1.01512844137628	0.310044605692006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40493638229029	2.11340057764596
Merged-chr18-4256969-3	6.25132840919783	0	1.35471481751999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166327155-3	8.71714715382259	0	1.34453587206873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80807553-2	8.63421950970251	0	1.38284502584833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103378337-8	68.6906905607573	1.815168271859	0.326182863097898	5.5648793275636	2.62333883502023e-08	5.44282731804828e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5415518707689	5.76611110822498
Merged-chr8-120750770-2	7.51883752337319	0	1.39997490860769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14824650-5	19.1736624983921	1.99852491485594	0.474565971124414	4.21126889928651	2.53940253081991e-05	0.00189895476698822	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2196220251985	5.02608564651021
Merged-chr8-18619250-6	40.5931374966689	1.28107866406585	0.653095826697068	1.96154777246811	0.0498151579241021	0.588290716836035	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	3.02046200754364
Merged-chr5-5809468-2	6.76709942642215	0	1.3685883137409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30163275-4	28.307630227888	-2.83751504413947	0.531927101519378	-5.33440585379931	9.58579062998648e-08	1.65947131482623e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24420037751496	2.24979923409176
Merged-chr15-73320775-4	9.66311184149324	0	1.3628096093855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71055695-4	14.62498088699	0	1.34387946553131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47359785-4	12.5885005092941	0.402015776880762	0.575454204417901	0.698606029453586	0.484798274604628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83276241593601	2.97519421385983
Merged-chr16-38701963-4	8.15273536334574	0	1.3550387609201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85397357-6	15.689832766208	0	1.34296008348974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19033877-4	22.5086554646977	0	1.35415959966167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122785401-4	9.78393671025882	0	1.38516173212259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129330818-6	24.7593782915411	-0.402653418507903	0.483045065941816	-0.833573194092833	0.404521536250659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20734739752629	3.78035433244583
Merged-chr6-73059937-3	6.47320040246623	0	1.36798174172022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78471169-4	21.5298819923337	0	1.34778261632656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149089142-8	55.6624735610617	0.204367618332067	0.288892415189534	0.707417736107703	0.479306918182662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05126956743861	5.25215960926157
Merged-chr16-55750220-4	8.93846817453327	0	1.34430843440373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84226953-2	2.5252825733859	0	1.53373637170885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45050344-4	13.7649197114866	0	1.34075290819687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50498552-2	4.53681292206176	0	1.41547597794318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37359120-4	8.04642084922992	0	1.35710778974088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102982612-4	8.11222905798227	0	1.35060251397894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19690142-6	26.3720323143854	-2.16948550873314	0.758671985723781	-2.8595829944392	0.00424198403411876	0.109388050337126	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21175319635018	1.02186287315087
Merged-chr7-122356701-4	10.0340688271266	0	1.34937039064646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74968414-5	22.1684208196232	1.75129468121589	0.578077629432941	3.02951470883557	0.00244946975980575	0.0727599599307546	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	3.58078894673813
Merged-chr18-46424464-3	13.8743607802174	1.32671754139485	0.711980227985913	1.86341907997634	0.0624033276693556	0.68418364033451	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	3.13740203858764
Merged-chr2-129360344-9	52.4650834395176	-0.205528062655808	0.214069119540472	-0.960101406017838	0.337004180916794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96726584039646	5.82868106009813
Merged-chr2-116952926-4	8.64461248887607	0	1.38787560368766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55318911-4	7.17287845717356	0	1.41473314045678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66346127-2	5.48090331645565	0	1.38107216917508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70646106-9	82.2289792202607	0.56705935300878	0.217332688792623	2.6091765401654	0.00907604054518664	0.188168685941994	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78206865852057	6.35416017200465
Merged-chr5-36515336-5	27.3530320919118	-1.7309972294832	0.401937545667032	-4.30663233167367	1.65758782408935e-05	0.00134084548407252	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20370309530229	3.5039537521573
Merged-chr5-147758948-6	18.2660636721982	0	1.34464531587359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73023087-4	8.48660902016011	0	1.34551663797516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105640987-5	19.4289329757135	-0.254812400708071	0.552319132640659	-0.461349943627343	0.644547558260549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2626815664136	2.41809014055619
Merged-chr2-104110271-7	31.9509249381443	-1.44696231780322	0.488847697371826	-2.95994504133388	0.00307693927427925	0.0866628715080549	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97721297952919	2.74814136281697
Merged-chr16-76768759-4	10.7966691095269	0	1.35055559795811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70370674-4	7.7287084520348	0	1.35520148103262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131321414-3	5.10616376363021	0	1.39146818587103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93125425-4	13.1230329722189	0	1.35290711745084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108443491-3	8.43230399356233	0	1.39021635022608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106242970-4	8.41360151027852	0	1.34656235056116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31559682-1	3.96868947691574	0	1.37868151015528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83859036-4	19.1265776848031	1.37806848687849	0.673004463891739	2.04763647318121	0.0405956327462808	0.51283169277715	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57481894122996	3.1826139367345
Merged-chr5-20256744-4	13.5799614022448	0	1.34595044789963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31076032-1	3.00457611160613	0	1.44126653539776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23980713-10	71.4411143230256	-0.383540918104537	0.234777872290058	-1.63363316296984	0.102335900093583	0.925141725126735	C57BL6J_F1_Control-BALBCJ_F1_Control	6.61002101256908	6.17098867682504
Merged-chr16-14352911-8	44.4458072739531	-0.423810038056577	0.424544764652751	-0.998269377796295	0.318148752394747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87644649098659	3.68074331931436
Merged-chr14-30694961-8	44.4016487513702	-0.482447469602576	0.300840196243514	-1.6036669156141	0.108787492227193	0.960572215286905	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25530785527286	4.78830811748294
Merged-chr13-64375887-9	52.8818961732555	-0.39212794529279	0.244563392695814	-1.60337956130874	0.108850880649572	0.960572215286905	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20749810196443	5.83019249237541
Merged-chr18-65381975-5	24.1439574899231	-0.34890728163076	0.552780893111455	-0.631185494974066	0.527919244984477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53658386094885	3.23742544357038
Merged-chr3-146568811-4	11.8363744149657	1.23485176659505	1.31886720499144	0.936297272327023	0.349120152176973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr11-51890511-4	9.61281158168164	0	1.3563509172494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142190499-4	11.6290915676959	0	1.34318181252471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96725947-1	3.32913780778431	0	1.39807085612065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29944139-4	10.2681347369963	0	1.34456620476654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107602284-4	13.0193925005565	0	1.34983793992433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37231310-4	11.8362723373421	0	1.37750234137125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65596714-3	12.5617412639983	0	1.35041480787058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68519561-4	9.25369011422036	0	1.35966704556711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12015205-4	8.58687676712216	0	1.35524693777422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47917844-4	9.98020162177407	0	1.34981773772286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76309356-4	11.022560409951	0	1.36561350227717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67042006-4	18.9452857205209	0	1.39251619756153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91956166-4	10.281578114214	0	1.35318936104877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69085149-1	4.40251548190713	0	1.40145889139248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93423142-6	32.7315556377354	-0.418953597497069	0.512966688963963	-0.816726712495168	0.414084622253431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22831762469177	2.84379256840817
Merged-chr13-99315020-8	59.822848429248	0.178877854980737	0.31686798621397	0.564518546407988	0.572401281836563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54926936394463	5.6565207344051
Merged-chr13-45255490-4	8.62013541296283	0	1.35364374712604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8982665-4	15.7558562736976	0	1.34855251550764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20212884-4	15.3766885674758	0.158711577478176	0.535564427792154	0.296344509161034	0.766966998198551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1404914953932	3.10598512970766
Merged-chr1-156986794-3	20.0143424583924	1.36088040453809	0.387098549585215	3.51559158771403	0.000438775389427268	0.0195824231476821	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84436969367764	5.20031684991926
Merged-chr9-105122984-7	38.2934835962009	1.23015348420058	0.311151069549422	3.95355698433552	7.69979154574597e-05	0.00470813238059848	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03031129369257	6.27994297119407
Merged-chr9-77751374-4	13.4418984717357	0.603066069982307	1.31751884792527	0.457728609296157	0.647147431268446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.600815099743027
Merged-chr15-81481198-4	9.71869270691072	0	1.34625698634343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16128955-7	28.7948891301665	-0.55371737352222	0.344334065273657	-1.6080818872282	0.10781724557804	0.955154565313394	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29277760610594	4.77404028846633
Merged-chr12-101758856-2	7.94726226584938	0	1.4014449931347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88097914-4	8.54453633746033	0	1.35094788322017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10706157-4	10.652584523909	0	1.35619813624825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59608596-4	7.38557775558808	0	1.37583483993325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75075471-4	10.1999871931156	0	1.36189395938143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110416711-4	8.34126154401786	0	1.35080216289098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71287982-13	105.0891996802	-0.222383807612662	0.210407782244402	-1.05691816738199	0.290548936327325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.08607862267258	5.90565185743974
Merged-chr15-99259683-3	16.4918326806659	0	1.34467566150394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49396504-7	28.4710750327767	0	1.33723649916825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33256893-1	2.15048481792749	0	1.42736368570654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131979250-1	2.38501255487754	0	1.43504654613409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116735562-4	11.3128670818994	0	1.38021125081673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36962468-6	27.3321271527033	0	1.35554993305527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39318862-1	1.71685001582918	0	1.65773687559375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66813066-3	4.73432930455698	0	1.37519028990522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53239097-4	7.82893412674869	0	1.35261674271247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102400094-1	7.77637958300514	0	1.35285118536126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13336513-1	1.67438842046473	0	1.58695415208587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44539983-2	3.06909227109194	0	1.40737765161957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31176614-1	2.18013148977169	0	1.48561796803386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28427762-2	2.2435785906528	0	1.42235647381275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169774646-2	5.26280017151305	3.2919828780602	1.24446175242623	2.6453065927033	0.00816169295512946	0.175221748557615	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.52633957112176
Merged-chr9-99179862-4	12.8743038820417	0	1.34426162207066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18732775-1	2.11529165866848	0	1.44163618006347	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16120844-2	4.08669008692758	0	1.39088893517217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89368911-1	1.87033591262713	0	1.5316978524327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37791780-1	1.56558829524652	0	1.63501165724403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99516401-1	1.91426567678264	0	1.46115472653333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29998592-8	34.9902859332733	-0.0215466570233329	0.326837307427918	-0.0659247170798729	0.947437762000928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15643620475075	5.14152491375171
Merged-chr5-5186316-8	26.9405069940679	0.0113730171299214	0.391588691841859	0.0290432726145072	0.976830078581386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71194725212715	4.66122530360021
Merged-chr4-102566638-4	14.3158511707272	0	1.34628790677503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79206393-4	15.936252785655	0	1.34747711346966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115059107-4	13.2064983248923	0.61895221040597	1.02233253576384	0.605431392187395	0.544892397922089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.18909650862134
Merged-chr19-34521592-4	17.9128487019842	0	1.34948767135491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134070065-4	7.6301486674274	0	1.38857286985681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9886889-6	42.379915838422	-0.214816633016116	0.476941708173393	-0.450404377169754	0.652418889365937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0176734060616	3.42558517843263
Merged-chr14-45705850-2	9.98815571832774	4.12760789922022	1.04681445250819	3.94301768506385	8.04627194568317e-05	0.00489795405034033	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.56258084202057
Merged-chr15-59615159-9	67.2569470785883	0.093230724097533	0.255424384996777	0.365003224334707	0.715108999387979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70907222857981	5.8938947342398
Merged-chr10-13933525-4	33.7510503777763	2.39258653724366	0.431273826249271	5.54772024551468	2.8941846680059e-08	5.89232151191508e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62101378947091	5.44559242206333
Merged-chr4-10923385-9	100.121158648292	0.143412185776122	0.187480508136128	0.76494451184222	0.444304586873001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.35108369912254	6.46518622986167
Merged-chr13-94322654-4	17.2788398540816	0	1.35492107237322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80130884-4	9.58590349806542	0	1.3560476954685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181281849-2	4.3124207989163	0	1.37679958755007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70835294-4	9.39396279144972	0	1.34931437764155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167293514-4	14.8819799214346	0	1.35982089615062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69655279-4	14.653904595306	-0.756215070631304	1.02189713412686	-0.740010951569444	0.459293349178889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	0.577068348605183
Merged-chr18-65376243-3	10.736995596832	0	1.38811260033195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44515418-5	26.6570292992508	0	1.33642053668125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78703131-8	44.8901560109243	-0.456171663218325	0.331966066545709	-1.37415148471361	0.169394658741907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69757361749554	5.34224940325192
Merged-chr7-71872495-5	31.7939307080525	-2.04849608619608	0.415652005484694	-4.92839216259119	8.29090744473906e-07	0.000108732755763873	C57BL6J_F1_Control-BALBCJ_F1_Control	5.91523857185996	3.72953490804855
Merged-chr1-37357324-4	12.6955925505915	0	1.35359211212573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66137409-8	43.7767833345827	0.91063160323857	0.327082821253207	2.78410098014171	0.00536763201294928	0.130142332110575	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72731805155049	5.59106798954478
Merged-chr6-119918880-4	20.7660992042232	0	1.33848278012042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87415542-4	9.95708293445138	0	1.34605864598091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75802094-4	8.38606344100205	0	1.34811959498245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-53483896-4	7.08622462534623	0	1.34705143642167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129495148-8	39.6825229200901	0.107873916101917	0.382769690831498	0.281824602850817	0.778078004921394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36271611214978	5.53901350599666
Merged-chr7-105651366-4	6.35262162163993	0	1.36075279293461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5097417-4	19.4543842798682	0	1.34684589483499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85002230-1	2.12483615263794	0	1.50011242901524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-34416970-1	2.75828195617328	0	1.44755078954435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57530725-4	8.48597478421791	0	1.35725607507376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14132044-4	17.1820204469591	0	1.36450360813152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55272540-4	15.0042368788715	-0.819594285749479	0.823551109929707	-0.99519541151421	0.319641233024518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.27992882773773
Merged-chr10-87688003-7	31.7289087022286	1.2501987069584	0.419782817116495	2.97820362335472	0.00289943290263361	0.0827350515245463	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36107877948042	4.85741431856996
Merged-chr6-98513460-4	12.2640928413734	0	1.35516619285819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5808011-4	9.6445553210954	0	1.34849803290479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165770409-4	7.61190024820245	0	1.36665072888276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122039776-4	9.57622669627252	0	1.35348306463695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109866520-8	77.164286296506	0.398983684551007	0.351777125738044	1.13419450941821	0.256712966636503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17237251232286	4.62752428746922
Merged-chr2-90583745-4	17.460604645109	0	1.34197389614414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191850908-5	22.0344523708304	-0.196133493503296	0.715347672928916	-0.274179257060064	0.78394686800704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5646301976401	1.62355329225066
Merged-chr10-94225576-4	18.0456693507316	-2.63598989132191	0.692857778439868	-3.80451800260864	0.000142080579148649	0.00784097279384917	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34592065321212	1.70887105531442
Merged-chr18-39737885-4	16.620672979043	0	1.35721280185275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97400518-4	12.0706235260015	1.34534501829076	0.731215686741646	1.83987439367681	0.0657866801690644	0.705762413126145	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57612722179308	2.42529269712342
Merged-chr3-90125966-4	10.8087931442739	0	1.35020185685984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99024758-4	17.4060937424003	0	1.35474565300067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111062664-8	43.2965300372419	-0.0205210604026367	0.291066987962541	-0.0705028782078086	0.943793409774309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9176059531924	5.89868807754009
Merged-chr5-22898767-4	20.5998977478783	2.44669869115167	0.467197750162738	5.23696591068647	1.63237828312931e-07	2.62527961812503e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95988517553914	5.29236304868104
Merged-chr16-32803750-2	4.5349568629378	0	1.38086923981271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-8684107-1	4.60575622347837	2.42435851165739	1.43938825118778	1.6842978325388	0.0921241240829585	0.863738236436364	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.837303648891292
Merged-chr10-44634893-4	11.500082777684	0	1.34728540874852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84188425-4	17.0974351011241	0	1.3406610784199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111229268-2	2.66533188392903	0	1.49681490267782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76132226-2	5.45147145974797	0	1.42231692776204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95849990-4	14.8193317225836	0	1.33860669576482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56456150-2	2.83663350657732	0	1.52820794331549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-87924736-2	3.26166196450425	0	1.45175126127737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104366450-6	33.8969166418444	-0.669559273011281	0.796389344715192	-0.840743635577812	0.400491569492544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86737052669785	1.11893902259477
Merged-chr10-122562705-10	59.7077601121919	0.221041651392603	0.204782542588208	1.07939694760549	0.280410811082094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89758902620912	6.11851886496734
Merged-chr19-11485421-4	11.2286405302882	0	1.36330713036293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69041777-4	8.51565834552458	0	1.35663535737712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150556560-3	13.1227527867829	0	1.34444078490334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70650575-3	6.6978038462638	0	1.3603577599656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67736798-3	10.1099395683959	0	1.35175220899585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55909681-8	52.6714467141251	0.258489998325327	0.31362760018629	0.82419403831738	0.409829313932631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29229813535165	4.72183183162691
Merged-chr4-135307111-3	9.89323945468209	0	1.36630368544974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110764758-4	14.3162334003467	0	1.35427079731128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118152242-4	13.4157114202632	0	1.35994406077881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88433574-4	11.8981125123758	0	1.34284361052285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63921783-4	13.582339014768	0	1.34814621383758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131092414-4	15.7469650147834	0	1.35947273050892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46360466-4	11.5537176867456	0	1.34842132200843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44229614-5	25.4057172092954	-1.57326827474948	0.529468788758524	-2.97140890672406	0.00296436799635866	0.084278284473881	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14971552034457	3.1440786134911
Merged-chr4-16102220-6	31.0593414043303	-0.262181439309115	0.485202109513621	-0.54035511010439	0.588952159202698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59365278618262	3.33712439280187
Merged-chr19-16170944-2	5.80028007925122	0	1.40930603060759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71006274-2	11.2861259345294	-0.598047237017657	0.546326262634097	-1.09467048890198	0.273661021948712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42414620212235	3.00393455483044
Merged-chr15-62181764-3	6.28218425902039	0	1.38285673256991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-20829519-4	9.70501084512508	0	1.35249025931366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86889754-3	19.32338348953	0	1.36989551853194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-147960401-4	8.39342972169747	0	1.3541689690897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68467688-3	14.8400752028245	0	1.37898137476558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52270604-1	3.10086616529104	0	1.49956901189508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43931057-1	8.02870981177516	-0.459953038757515	0.817383476353951	-0.562713893861909	0.573629721761916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64730971531962	1.48198927919575
Merged-chr2-4460311-3	13.721480213273	0	1.35518065064206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114897498-1	3.92644083401632	0	1.40739299544606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91011093-1	4.66951604069147	0.872523113393803	1.20212016695899	0.725820211136653	0.467948995041021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	2.19776446004195
Merged-chr14-25378296-7	33.8510946874682	0	1.33335116409295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125461737-7	37.3421417399491	0.283247654995057	0.332947936200398	0.850726567725512	0.394921261298493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27660601597874	5.62240063165163
Merged-chr2-163928662-8	46.7654399863077	-0.791727993823621	0.244292243222636	-3.24090516906867	0.0011915081394472	0.0412280018791919	C57BL6J_F1_Control-BALBCJ_F1_Control	6.39792460458131	5.59722887244981
Merged-chr19-17295241-1	5.40578398378149	-0.536944389492836	0.918848547890178	-0.584366586556343	0.558973702012624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58148496924487	1.54726712393679
Merged-chr2-14324840-4	6.63925241661244	0	1.35931100771745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93357895-6	63.9496654017562	-3.42594043366135	0.363171658606808	-9.43339148986425	3.97039080891881e-21	1.34891546238761e-17	C57BL6J_F1_Control-BALBCJ_F1_Control	6.70235642387222	3.24674846141715
Merged-chr11-121713758-4	10.9080293858134	0	1.34989394763944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118379638-6	14.4351235428724	0	1.36119636155358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72303825-4	17.149881536699	-0.0400437208578035	1.09841213832257	-0.0364560072314532	0.970918756515696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.977057525713991
Merged-chr15-62003063-4	10.9094222549514	0	1.35163331026612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74638596-4	11.8308463694142	0	1.34376430578158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53816599-4	10.5827599143139	0	1.34777219719813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48127695-4	8.83215100941887	0	1.34602812437838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131892165-4	42.8605584645507	3.53159669250185	0.520233371740659	6.7884854842845	1.13316778560655e-11	5.17629139981399e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	5.73438652391371
Merged-chr3-106553640-8	41.3131490087515	-0.0375076326896197	0.274416788521233	-0.13668126098166	0.89128274207618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17512451777475	5.13711642051143
Merged-chr10-67717698-3	6.54990782821428	0	1.36779837033344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72836064-4	8.19688383188605	0	1.35493991522386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45893908-4	7.81515130258455	0	1.35697436235267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60530229-2	8.01443552055498	2.88265175782024	1.13506068922756	2.53964548783905	0.0110964882653536	0.21542643057727	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.338064021838
Merged-chr18-65053975-4	13.8803336591918	1.78536550228112	1.29317448074725	1.38060681591045	0.167399886509082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr12-36364521-3	7.36429762571335	0	1.37270408536935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111967254-8	35.251899604869	-1.01312006348107	0.346361285365651	-2.9250384101431	0.00344413709246079	0.0944600646867186	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74468710003746	4.56760329632326
Merged-chr15-79446422-5	18.2544116890112	1.08803040839203	0.416649151788879	2.61138275146027	0.00901769039755452	0.187239355355487	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46380899332235	4.53012288231583
Merged-chr9-120055008-8	38.8580149799337	-0.19595531629411	0.305228000832824	-0.641996526398102	0.5208754383829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03164715831338	4.88798673619441
Merged-chr14-26441247-4	9.49804546247381	0	1.34921258482352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36649925-4	8.36527963760546	0	1.35454998588704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79725095-4	6.88253806375977	0	1.3646763572872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35066731-8	31.7859284283871	-0.0502909415137295	0.336926295781958	-0.149263925503384	0.881345379617767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86232956077058	4.40571266920292
Merged-chr16-95752688-4	9.89442844611188	0	1.35296113073923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43573879-10	89.6596605072295	-0.151508356911175	0.2281749962225	-0.664000698671801	0.506689863914853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00060032335612	5.81400195956538
Merged-chr17-47250131-8	37.5408782009074	0.395948335369313	0.343071032708077	1.15412931323243	0.248447157173178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07101038565259	4.85012169046672
Merged-chr3-87515902-11	130.961741169725	-0.321916216358645	0.158882986540129	-2.02612138258957	0.042752347404593	0.529746129382951	C57BL6J_F1_Control-BALBCJ_F1_Control	7.32076726709445	6.94578952101273
Merged-chr2-30604932-4	10.3363637461716	0	1.36428636814666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26887109-7	23.7436469148153	0	1.33699884281672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35541924-3	21.8546021484236	-0.72033656742868	0.838659566936318	-0.858914148037588	0.390387883180042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97799227303783	1.44790810950236
Merged-chr12-35418073-8	52.6931392624471	0.871112079660122	0.284437931727261	3.0625735265696	0.0021944255772588	0.0669205923390478	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04563641278567	5.9705329504708
Merged-chr1-43735506-4	7.93758075198458	0	1.35760855910406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123354558-4	8.98708554726194	0	1.40952156089068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21412805-4	7.88742086880595	0	1.34805223616323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57504920-4	11.3655818547597	0	1.34433370620253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17467010-4	20.7541681801645	-1.82895930304466	0.444593601816911	-4.11377783119301	3.8923606572222e-05	0.00269534819064893	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23968746411906	3.37927782433468
Merged-chr19-21843192-1	2.00684077822942	0	1.66173553371282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94075034-1	1.99685700614307	0	1.51936128846587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118106930-8	66.5037202464606	-0.499556988951391	0.261068644322437	-1.9135081895718	0.0556830260993234	0.635782133692297	C57BL6J_F1_Control-BALBCJ_F1_Control	6.37101894190481	5.80997637596692
Merged-chr15-28159100-4	10.7307722867875	0	1.35962855126287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67081802-1	3.01234049952989	0	1.4349109860769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62681583-7	36.1912616215568	-1.47852447420939	0.51637601041194	-2.86327103582889	0.00419291730223127	0.10873064478047	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98326479814294	2.82159560044339
Merged-chr9-107597676-3	15.9506468178836	0	1.35441587127609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161424765-1	3.80643630244139	-2.53895200632264	1.306131863813	-1.94387111796711	0.0519109949241949	0.605100388982881	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48219169541115	0
Merged-chr14-70987937-1	2.61499889659609	-0.034953286546536	1.51629577812664	-0.0230517601188076	0.981608985297032	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr19-53535629-2	6.24093093812679	1.1064361762056	0.957792412743485	1.15519413338882	0.248010936602224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.97489399129634
Merged-chr15-12014270-4	15.0902962482722	0	1.34987595878619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110891749-5	20.5103306962304	0	1.33762215119954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23769231-4	10.8728522453196	0	1.35639195810777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90595143-1	3.60116032171123	-0.40433781288444	1.06481907519996	-0.379724426714003	0.704149986048302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.18909650862134
Merged-chr9-46117000-2	3.87195269031385	0	1.48789173160048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70445608-3	14.5862770613852	0	1.3648080016406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68195555-10	57.77561142344	0.0417586449203301	0.295741957057174	0.141199596215079	0.887712265053735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.52536296527585	6.62670617179213
Merged-chr16-57189704-7	40.180132650621	-0.77294255533118	0.361333897465589	-2.13913657354771	0.0324246091426844	0.445318172912375	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83266323700526	4.15122098585944
Merged-chr5-118647621-8	65.1290479081124	-0.127252612387934	0.22977479805794	-0.553814489071362	0.579705811288867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.19193226661356	6.08434864396435
Merged-chr6-34359241-4	8.80035424644629	0	1.36174805094041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55508889-4	18.9748201282619	-1.62656140227315	0.449231215989409	-3.62076664394465	0.000293731356198815	0.0143716856810184	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17557396944286	3.41908218786713
Merged-chr9-116161144-8	37.0215580286442	1.30392299948332	0.30792803884441	4.2345055824623	2.29055095251765e-05	0.0017538699248128	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59635069773661	5.94981163734429
Merged-chr8-86893822-4	16.5565479776672	3.13396515940473	1.09961824606179	2.85004834234864	0.00437125846423302	0.111752980329227	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.80346354702228
Merged-chr17-31021051-4	14.8619204602622	-0.668729089921625	0.723373583223803	-0.924458821044241	0.355247481763208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67756367980613	1.20027794713453
Merged-chr18-58568515-4	10.8714880499017	-0.0368377411395801	0.830269072274551	-0.0443684371364837	0.964610720378779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.44790810950236
Merged-chr18-79590641-7	26.6907107648313	0.3568933513367	0.49025773854569	0.727970867722345	0.46663141970867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46791040580188	3.62019916586956
Merged-chr1-87112109-3	10.0770102048474	0	1.35645381560865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29500516-4	8.13824450194415	0	1.35486997680648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51520527-4	13.7665070870905	0	1.34332954152352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115582210-5	23.3739818646865	0	1.33798628081994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34105013-7	27.2359702833628	0.9025214609676	0.348929610219442	2.58654305778178	0.00969440572704298	0.19682395472852	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27355692396087	5.15623715006659
Merged-chr15-74931822-8	50.3840856864784	0.644456177243187	0.273802653432997	2.35372509785006	0.0185863507852228	0.30496089415452	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43495328202506	6.19192576192461
Merged-chrX-75104244-2	6.65079687830632	0	1.35926493904268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119347676-2	3.91680449056292	0	1.37573976339565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99072718-4	11.4646509264412	0	1.34844086945843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21403032-4	10.4486788731195	0	1.34973184612148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3981613-4	12.1949603741889	0	1.34969810864536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115319838-4	11.1687754401515	-1.28815065194481	1.32517824887027	-0.972058402741654	0.331021494706319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr14-55778119-4	9.4889580661796	0	1.3568965388845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56183548-11	102.667493739595	-0.413225419735534	0.265865476940993	-1.55426505347758	0.120121205757217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.75657843046156	6.37886776694128
Merged-chr12-26391273-3	11.5806944215993	-1.40404199573981	1.10165130508487	-1.27448856934966	0.202490321127637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.55634759613363
Merged-chr6-124688438-6	20.6093763974753	0	1.34004937892194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41960029-3	8.729746214529	0	1.36163869883603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54902412-3	8.06586686336506	0	1.34602709545937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-26866805-4	10.1121255421046	0	1.37564028963892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115722430-4	10.1957971385805	0	1.34317223752627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144039667-4	14.7255944332081	0	1.34370032377148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111031650-4	13.3887709476522	0	1.35789475159554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167906950-4	10.7871813354209	0	1.34627003984755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65680308-4	9.87849730146744	0	1.35230964688801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100600568-4	15.2816169246131	0	1.36230567563151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60388560-3	6.13816413566808	0	1.37602803136728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101093390-4	9.83606283459016	0	1.37053990114903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128709625-4	16.4290895561207	0	1.35253781694192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79059500-3	9.05498430923846	0	1.36615923439587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4190587-3	6.39200736532131	0	1.42626369765216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34034479-1	8.29888130050631	0	1.35002198215261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101997161-1	6.39864326371425	0.573682736558334	0.739577646708144	0.775689664380465	0.437932243940098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79247632064346	3.12100652996621
Merged-chr16-87654405-4	11.4352049133391	0	1.35190589733876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5320357-8	37.9024494808543	-0.109202931325928	0.306744491298742	-0.356006169380802	0.721835944980744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83868006460762	4.72513864592971
Merged-chrX-139552295-3	6.26688913574273	0	1.38989292206479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44652195-6	28.6869439842659	0.571949254668145	0.449356658913099	1.27281802399807	0.203082623796723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77285250524885	3.89037111532195
Merged-chr1-124073282-8	59.9910899834705	0.297213480737223	0.298980113615998	0.994091135837067	0.320178500428249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7588983669325	4.90129923091346
Merged-chr14-19971043-4	10.75727722082	0	1.36838862731516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11542824-4	8.00784052685114	0	1.34996067424206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109480067-4	10.7179871490121	0	1.34531844102995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24653281-4	12.0097714669648	0	1.34885970344942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43673814-4	7.91812660328909	0	1.35855641117973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33248762-4	10.6925710063155	0	1.34697924950587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93477060-8	49.3362095126882	-0.800880622483305	0.273765583311597	-2.92542478420946	0.00343986320113465	0.0943904713530936	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0131171667793	5.04204646116853
Merged-chr12-70010462-6	19.3149714018623	-0.434462092980879	0.565724210012102	-0.767975075649645	0.442501992655915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2180769473006	2.79220967188512
Merged-chr2-90483920-2	3.63143284089565	0	1.42220498736292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44528127-4	12.9777399872178	0	1.34804666841237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20773353-8	30.3714980808583	0.463133677569428	0.34308362100834	1.3499148580986	0.177043295127282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44075696090428	5.15841903526484
Merged-chr7-25726157-4	12.045053365346	0	1.34624717739888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101906576-4	10.8808333782378	0	1.3476300805609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120835163-4	11.5859680915627	0	1.34450532176919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32932706-3	11.8913658489413	0	1.34775987713432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16104427-4	8.77425696742243	0	1.35608085720672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93128067-2	5.9657196154845	0	1.36234842708586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76377943-4	9.62775190680021	0	1.36255167880799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59560016-12	57.1545395125474	1.37791144112079	0.379162778640389	3.63408941685082	0.000278964110436782	0.0137481505704742	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86957060418523	5.19910850334777
Merged-chr4-63765226-4	12.1632747147266	0	1.35315174407752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152402151-2	6.96732275421025	0	1.36669717030971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-194962406-2	4.93374393010532	0	1.37906615132203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-59179264-2	6.62092311201893	0	1.39243046715831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78334565-4	10.3619169851178	0	1.38383492962192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9493923-3	14.5287538319141	0	1.36852844608507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105898571-8	43.6132783331441	-0.242846234935671	0.32015814730382	-0.758519615948483	0.44813997441669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93309447439465	4.75075690139864
Merged-chr18-64958315-8	33.8656178508497	0.619909546887833	0.290033248185429	2.13737407957967	0.0325675779250384	0.446604684265178	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06461432592716	5.67170592767289
Merged-chr14-102867864-4	9.83667875640772	0	1.35902415266016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79613912-5	21.1206415422995	0	1.33929940146238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95650800-8	73.8834818484049	0.136306787612156	0.310843568634746	0.438506056956005	0.66101948039762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05910871902755	5.19776108265757
Merged-chr3-50406117-7	41.4834661808042	-0.469129440726967	0.406786450790367	-1.15325729216268	0.248804794037333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78022955388949	5.44063395829129
Merged-chr10-20653483-4	10.334074913357	0	1.34286931421038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20056493-2	6.24225531206975	0	1.36742476892164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62206195-4	10.4698764341288	0	1.37480841506756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69424063-8	55.7262507772849	0.0805572525004762	0.282523518695133	0.285134677893504	0.775540963176527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84871910493308	4.93263557602442
Merged-chr6-94163262-3	7.84984699152166	0	1.37912799620725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136230818-4	12.8744145520004	1.93123568169698	0.931360042489481	2.07356510220782	0.0381197190577835	0.492782356304887	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.75072703541089
Merged-chr17-85574153-1	3.16654317668745	0	1.49278574880916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132151180-4	11.18204933048	0	1.36023068676999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122642310-2	4.63428320561358	0	1.38498308003389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45266599-12	50.4752102808379	0.0972775278958953	0.277239734774982	0.350878736681988	0.725679324221762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69111077663767	5.98909650576767
Merged-chr10-118370643-8	35.9567676798154	0.379051853438991	0.275144313076435	1.37764742145948	0.168312172128998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31263828349674	5.75988249349049
Merged-chr1-66649800-4	14.7689454389568	0	1.3503510452457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6163247-4	10.6638420424547	0	1.37553822051516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94588266-8	74.8145794639862	-0.0829630791059142	0.303221345667093	-0.273605668899707	0.784387677036626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84143532587723	4.84122374519194
Merged-chr7-118699052-10	90.0110231133936	0.0750369103120417	0.26596572596076	0.282130000175709	0.777843830394711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.63577501136479	6.73024582978725
Merged-chr3-97681235-4	14.3984816727407	0	1.34917061039636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112361807-4	12.9985672497106	0.135335373504751	0.565004185573641	0.239529860061738	0.810694745256884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62358588376636	3.11629443247429
Merged-chr12-99264594-4	12.5911445906665	0	1.35197789548431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67715218-4	18.0574693205156	0	1.34600163924978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90873257-9	83.0114661925662	-0.838109397342263	0.269771209344661	-3.10674144723684	0.00189161763800064	0.0596441085754504	C57BL6J_F1_Control-BALBCJ_F1_Control	7.25310321926088	6.41467673386719
Merged-chr10-118121280-4	8.46122101833006	0	1.35488986855237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80425724-8	39.269943188384	-0.143624030557893	0.342935158167025	-0.41880812491072	0.675356366417251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90300831114503	4.71660733175373
Merged-chr1-55576177-5	23.9580400607638	-0.990495528388187	0.669616205300927	-1.47919886129855	0.13908717381613	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0849014692737	1.97656658922368
Merged-chr10-86883486-4	10.6777498763236	0	1.35061290215334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23844835-5	18.2897331470541	0	1.34582555057313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118619101-4	18.5839496469236	0	1.34944165261645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112278354-1	1.51435890914825	0	1.60456053630645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100641305-3	6.41698883142561	0	1.38479608849027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-76409583-3	8.20087802610431	0	1.3782908481515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111132230-1	1.73364420665123	0	1.43627138946985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69017592-7	36.3064871488832	0.63764371192672	0.428655680326079	1.48754289559785	0.13687148268826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17584449923301	3.53172906464562
Merged-chr12-32164423-2	14.001327074073	2.03774886987096	0.559205671170782	3.64400608742867	0.000268427066349593	0.0133012095712831	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35651348678689	4.79560800020762
Merged-chr2-148857680-1	2.10723457085679	0	1.65589909332758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140597320-4	15.8711638881193	0	1.34556443115978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62911088-1	2.41916937320249	0	1.54501043550939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30725082-4	15.3997827675976	-0.0351218101832642	1.13088407675364	-0.0310569499608537	0.975224122047977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr19-21476954-8	42.965162012716	0.335922664933208	0.363114185869006	0.925115784527331	0.35490568329036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65192831265297	4.87715537562558
Merged-chr17-65740982-2	3.10957748840827	0	1.64199617330992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167377892-4	10.6375644647748	0	1.34619344846692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118483484-4	10.940796501174	0	1.35643055643223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34072538-8	58.655635035416	0.215981433191557	0.302955905883692	0.712913757404929	0.475899125551216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00340788918465	5.23511169996996
Merged-chr8-67950417-4	12.0454475454826	0	1.34187614381564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90657666-4	13.2882747737717	-3.76269970571704	1.10062894938163	-3.41868138924662	0.000629253609162853	0.0254695435148798	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34492028387591	0
Merged-chr12-17748250-4	13.6420087287453	0	1.34146865273911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43384537-2	5.72913794420311	0	1.38827727114689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-57749045-3	5.91706499015947	0	1.37670857726836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13603314-4	9.17752594970849	0	1.37293578945884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84256475-4	14.1678805365012	0	1.34664197996207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136569743-2	5.99265018193547	0	1.39738244232353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89905215-4	8.68114415013093	0	1.35146821612996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144932585-4	9.34111949751222	0.409635778866748	0.860095583075357	0.476267739222721	0.633883645698969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	1.35339221635894
Merged-chr11-34776164-4	11.554683084459	0	1.35376991034595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28292913-4	11.0258323435388	0	1.35719426748569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17960822-4	9.91361378398172	0	1.36089909562302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22353827-4	10.7699535486853	0	1.35773461528827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34607991-2	5.62884616082594	0.142426765272416	0.910580196366448	0.156413203187101	0.875707330624967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7204458171722	1.70266130792036
Merged-chr15-64095449-6	21.7551518653063	0.564298820908171	0.492038254814487	1.14685965041667	0.251439631244593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77185435753737	3.47098174288596
Merged-chr8-71603140-6	87.5369373203653	1.40454710130728	0.321390653631245	4.37021763214937	1.24122765947934e-05	0.00105755320284698	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18080866879963	6.58359890289198
Merged-chr4-6373152-8	38.9992040223612	0.0287982891983923	0.312920535314155	0.0920306785538393	0.926673665054618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87643442704165	4.89561360386019
Merged-chr13-89889212-6	80.378614247914	1.2400033375881	0.580736693623911	2.13522470889558	0.032742659525858	0.448439967036059	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26927213904674	3.33997603561533
Merged-chr17-71265877-5	47.8753178610193	-3.3339208901736	0.393039013198877	-8.48241721105339	2.20563036904427e-17	3.5263488597317e-14	C57BL6J_F1_Control-BALBCJ_F1_Control	6.44304679440787	2.67453763829544
Merged-chr7-112299875-5	20.8820486833219	0.0706615148275118	0.572061487123811	0.123520838962226	0.901694673544515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41772268080239	2.55902289620632
Merged-chr16-44242776-4	11.626238187166	0	1.35156168500932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23057045-7	27.3344148216452	0.518652958581195	0.529217064085466	0.980038237197573	0.327067244402516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54054682698176	4.04861944357368
Merged-chr4-59553732-3	4.58482849375052	0	1.40961431612439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32459551-3	4.71404570063615	0	1.39862200639824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5402835-4	8.14082622755186	0	1.34755041471095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115985649-4	11.6022373605318	-2.10543122041685	1.12756002416028	-1.86724535750086	0.0618673322041632	0.679677912547718	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.41385117919798
Merged-chrX-163897549-2	7.12858215425778	0	1.37057572838777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59265838-4	10.629934714942	0	1.34985592334258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102986578-4	8.92405912874596	0	1.36325908394801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9020442-13	227.654165544088	0.0309801094775294	0.156521601368671	0.197928651423383	0.843100887017047	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.75913285014489	7.79072884407786
Merged-chr3-81054203-6	33.0785382036393	0.745223856454322	0.55258987541472	1.34860208196003	0.177464811601085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18907334447161	2.04164291770275
Merged-chr4-45452682-8	48.4954748561253	0.158863877236623	0.317240678124355	0.500767676377083	0.61653463676349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87648470256751	5.02884764869375
Merged-chr8-119824254-3	9.82463312788688	0	1.36054412983576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145746800-3	4.41265585499069	0	1.43008033263857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95533555-4	8.6674748179266	0	1.36433273480361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25592027-2	5.94631671552952	0	1.36069333212163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162665276-8	31.9783970426955	-0.028919940260743	0.35580437484125	-0.0812804515786133	0.935218919925821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42475253971584	5.32003121110809
Merged-chr1-177711189-4	10.3165047665615	0	1.36535745930859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45858247-4	13.6312332299059	0	1.36509262173008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45489848-4	12.6393645650914	-0.0374862440913694	0.500070160725408	-0.074961969410435	0.940244970734953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49403072782279	3.45857453874861
Merged-chr9-40415253-7	49.4711154271742	1.19069391175821	0.275493519545084	4.32203963898815	1.5459340566866e-05	0.0012636906674801	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69486760178541	7.00646014607552
Merged-chr8-122145042-5	19.1269819718698	-1.80000318907937	1.24785517015776	-1.44247764654596	0.14916767318385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr18-65679527-8	40.9150606858649	-0.209682391253989	0.282849066887002	-0.741322549024907	0.458497892727609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.95422675142581	5.72476254122373
Merged-chr3-103846201-1	5.97288324142958	0	2.03162326817112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25553202-4	9.00546949831642	0	1.34670482438788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20741060-4	10.887339170153	0	1.34625813418092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131272497-4	12.8331546923635	0	1.34872017155849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116083421-4	10.13271307805	0	1.37175280965677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182983137-6	30.2181761882546	-0.667739105615193	0.372524605653795	-1.79246980060092	0.0730577424827276	0.751853508376947	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43399273854488	3.87695492777589
Merged-chr16-91561741-3	11.1472826491154	0	1.34861361318447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36236626-3	7.03275776585664	0	1.37897746278841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132555167-3	7.15226313685056	0	1.35862717299743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60492396-4	10.1772480253747	0	1.34896596478683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28697502-3	8.51484411859816	0	1.40516730182053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18699504-10	49.5620865733392	-1.21682819573462	0.52864301113485	-2.30179567327	0.0213466976794376	0.33508089493403	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7396795010132	2.20225658013615
Merged-chr13-99221008-2	3.39504301417238	0	1.55476702322934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128529118-6	16.0829239709853	0	1.33972197070391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164087333-2	3.43516375969333	0	1.41925678966088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51768888-4	11.2625704583064	0	1.35218812079663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12439729-8	35.6117495724487	-0.00413506120066061	0.359766680728208	-0.0114937303040148	0.990829531956897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38213638237152	4.36055445287274
Merged-chr2-92058639-4	8.4303378465215	0	1.34837357584379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82953977-4	8.73078974649083	0	1.35120591901614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-98860371-6	26.1547157423715	-5.86762637321263	0.981418983178255	-5.978717014634	2.24901855647136e-09	5.90600964788534e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79602565204476	0
Merged-chr1-136194583-4	11.6217646418842	0	1.36950741040433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4294666-3	14.4832127700289	0	1.38937707781729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118459208-3	10.5295633510156	0	1.3739404041909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8917385-9	165.032932083072	0.381715400043398	0.160305298092666	2.38117769396956	0.0172573851508961	0.292150171104815	C57BL6J_F1_Control-BALBCJ_F1_Control	7.13958876757662	7.51654088021767
Merged-chr2-181193211-4	9.97268853540885	0	1.35919140044341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113013475-4	17.4998148533589	0	1.33614461760623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38200429-4	13.9825220588718	-0.0371722125745701	0.484417757312302	-0.0767358586952158	0.938833677516675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.592484606407	3.55661659848112
Merged-chr10-67049443-4	6.86812133279362	0	1.36418208650877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43546205-4	11.8021623092965	0	1.37124705154078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54956659-6	46.4338889058287	0.685359969716157	0.437211596618617	1.56757042817874	0.116981417973746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36906859149664	3.99460250858396
Merged-chr11-83271729-3	8.71046086720458	0	1.39119430223997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102031154-6	41.850104932436	0.708202597060345	0.51816833766886	1.3667423220925	0.171706087225791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49644819499981	3.51231305456142
Merged-chr10-86990767-4	21.1468361931966	0	1.36578610707112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114317581-4	10.3090697695474	0	1.35383357458049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172370169-3	12.9633944541706	-1.72748351953295	0.64134827404773	-2.69351862230845	0.00707021956796329	0.157576902621942	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71524349300644	1.85237491315173
Merged-chr15-64085989-8	37.9371238677232	-0.000143800786576122	0.346889153218962	-0.000414543911914574	0.999669241822382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35455414905337	5.49715585448193
Merged-chr16-30510868-11	72.1584316728068	-0.285465853094492	0.203917661522281	-1.39990744775828	0.161541035488339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.07991136644479	6.81243550380298
Merged-chr10-122722287-5	18.7921531285385	-0.85215754697026	0.621252489532558	-1.37167667144713	0.170164113813094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86005973207258	2.24668184253909
Merged-chr3-27656942-4	9.77854102051283	0	1.35676151319037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165651377-4	13.1538260404825	0	1.34924899009475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-25083986-3	7.57973810776521	0	1.35818793730829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86168006-3	16.0495491953925	0	1.352225988393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94665427-3	11.2665028186008	0	1.38939428798579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70856131-4	9.3743096375084	0	1.35468005173999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59856965-8	70.9536877016819	-1.68303970054823	0.293986193176945	-5.72489368415759	1.03498534718772e-08	2.37387208809188e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	6.39446511560466	4.73408589721022
Merged-chr1-24613094-2	60.9229702809182	0	1.81215998273983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30467537-2	9.64479116431843	2.07054694527357	1.01936640506391	2.03120971516003	0.0422337252872847	0.526160273342242	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	2.34134396315896
Merged-chr6-128065449-3	15.0346375027296	2.39672782885845	0.613688795679979	3.9054449840539	9.40521549368182e-05	0.0055753337952132	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73112371204221	4.45767608927057
Merged-chr11-5288482-4	12.8038551230431	0.462095098557714	0.877551064955474	0.526573457672415	0.598489827937409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.97656658922368
Merged-chr7-90042639-5	25.2270906109013	-0.250871956794626	0.581381129215385	-0.431510319458073	0.666097350826911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47394001682376	2.58151975688749
Merged-chr4-108318845-4	8.28552036712748	0	1.34816284583971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12273121-2	6.225321709567	0	1.35995039841977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134554622-4	10.933593933152	0	1.35119453276479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129498035-4	8.31549402609291	-3.40032479942666	1.11969539585044	-3.03683020581147	0.00239080086971987	0.0713290584396829	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	0
Merged-chr11-93736826-4	11.3881953106415	0	1.37760658019004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36001078-4	12.2571114969494	0	1.35451318308789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118312448-4	15.5800637895024	0	1.34877998457374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-110040542-4	11.7938656235899	0	1.34248683243459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99823560-4	26.2803810612104	0	1.35429792441294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72261461-4	9.6548827323027	0	1.34896231600066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63642738-7	32.1102727571129	1.34892274071163	0.422203065275298	3.19496197838371	0.0013984926323497	0.0467710756834016	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00026769284093	4.78118773103881
Merged-chr2-75734309-7	26.4333201266188	-1.59612228186899	0.448722631586408	-3.55703539227803	0.000375063641215429	0.0173220768673148	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07057857965242	3.30911035337865
Merged-chr10-122794634-6	15.005365371065	0	1.34009025186796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122585548-3	10.0584349130814	0	1.40856262228898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162517950-3	13.442930727589	4.076053475666	0.917968926800707	4.44029569701428	8.98353546990532e-06	0.000813893341014306	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	4.66456513279949
Merged-chr10-41615626-4	9.66319106037536	0	1.36020994187436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142748472-4	7.44257419025274	0	1.36473523156268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52100667-4	9.15860882278288	0	1.37299698898714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9676456-10	90.03834760246	0.0262832840780337	0.212014705705383	0.123969155774303	0.901339696764394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.85211114930159	5.92744379927671
Merged-chrX-19157608-3	6.97055763738802	0	1.35826204619551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59906409-7	30.7628505118928	0.160895459300023	0.340533633024473	0.472480376963118	0.636583944985567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32302366828877	5.72445465258307
Merged-chr5-134607329-4	12.0367536682851	0	1.34620406289389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13647842-4	14.3101542011448	0.274126627507809	0.646564313835075	0.423974261557734	0.671584584263997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77743761853437	3.01458896732428
Merged-chr2-35718271-4	11.4671271919434	0	1.35506032064864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93435139-4	14.5628798878755	1.76892412152346	1.22831864161662	1.44011827354124	0.149833939976025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr11-87421972-4	9.25626460477903	0	1.35358466472535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66105575-4	10.9923855192705	0	1.354641151993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8924518-4	10.2238608174961	0	1.36185977268474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109120035-6	25.0102144133187	-1.40342142329559	0.408886629693535	-3.43229961896154	0.000598485966099923	0.0245718267607445	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02451126778241	2.93278294892231
Merged-chr16-24193607-5	15.7893776316533	0	1.33756048961579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12230368-4	7.92505094122726	0	1.3615571344441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29536947-4	10.7680937582027	0	1.3549435241528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124642361-3	7.38706847297636	0	1.37503816736246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17002822-9	73.8484271658396	-0.297530602880186	0.377382182959468	-0.788406597648363	0.430458912885135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09375172726452	3.96177558736033
Merged-chr15-8224459-3	7.18587828983462	0	1.39116093689279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129604307-8	78.7207026329651	0.397751444421998	0.265712830834293	1.49692223432766	0.134413494040412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3230335299022	5.69819276402614
Merged-chr17-37203780-4	11.5868114836266	0	1.34597230533778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5734559-4	12.0598182864292	0.198311970936561	0.8867326133659	0.223643483895105	0.823034725277622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.58059388295115
Merged-chr1-138248273-4	9.38371682926634	0	1.35527520172449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76562331-4	9.81022007978429	0	1.36574681144665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145881230-7	46.6928758818646	0.538288470090914	0.344548076092976	1.56230293372951	0.118216641229707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32264519661947	6.08350161287913
Merged-chr6-72113463-4	10.6085702686462	0	1.37741236660175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123572122-8	44.4547661563178	0.362853464903979	0.279784339010313	1.29690413047245	0.194664175149187	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65482695834877	5.10246070326009
Merged-chr7-130968680-4	19.666807282779	0	1.35109893711079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34167176-4	15.5490074683309	0	1.35047682927998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16920734-5	31.5305769567192	-0.278775202198794	0.403931684009098	-0.690154333603885	0.490097137774901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93216555221975	3.63928239684356
Merged-chr13-37498192-8	59.5960486817458	-1.54550447321634	0.250584564709249	-6.16759645594923	6.93358186382032e-10	2.02635793836241e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	6.89166618446128	5.33774585724242
Merged-chr2-75590361-4	9.03142859323496	0	1.34459025785895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180983246-2	6.34447237623809	0	1.35161030009041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90902202-2	2.65796858869109	0	1.59285928304404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39737432-4	7.98933840564642	0	1.36796428291827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84778978-1	2.47764723240482	0	1.47510531474762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49576494-2	4.21131165792032	0	1.41052581992459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148693814-2	9.41232430022685	0.314527749774645	0.787088193886554	0.399609284216984	0.689444317173535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.51226750748471
Merged-chr9-31174822-1	1.67876553401	0	1.59354072825094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-171358515-3	7.59398368705762	0	1.41271256425386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10961395-1	1.45208814132032	0	1.70980392845663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6060803-1	2.26297759344271	0	1.57616578673596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101155294-4	9.14864719013467	0	1.34480930656171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180841653-1	2.29651470132426	0	1.41561711676381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135710465-4	10.8251242507079	0	1.3496665344029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74258832-1	2.41515480202454	0	1.49421314107275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106039768-3	6.06519238484521	0	1.37463565903722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90650162-3	9.55486670679526	0	1.35782273641899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80644207-1	1.94224579182857	0	1.64972385704426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109239476-4	10.4310530432507	0	1.35313674046053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40414605-8	27.0250433743725	0.312764332031142	0.325674597092109	0.960358390933033	0.336874871862913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95377640849053	5.20252831253792
Merged-chr9-102913775-4	7.6994694909343	0	1.35696848343957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39523902-8	31.9788487927103	0.473946327422186	0.358269510108521	1.32287653302852	0.185876440503984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96151321953702	5.41928736592937
Merged-chr4-103322013-6	21.491670578516	0.511100232398455	0.674585182242788	0.757651140066854	0.448659856347139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05016208779462	2.8611256832826
Merged-chr10-78367187-4	11.2295988279023	0	1.34888600702407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12249749-8	29.7247980790763	0.66905156416801	0.329384317845572	2.03121863403857	0.0422328209353164	0.526160273342242	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36126942607199	5.10488672673351
Merged-chr9-122122320-4	11.8240586088426	0	1.34212433805796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103900184-4	9.52098629004223	0	1.35429894263272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117048614-4	12.3244841024859	0	1.347792751809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43808171-8	34.9004601789666	1.12286720525525	0.301279898031619	3.72699012642857	0.000193780046623969	0.0101188180157851	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6918887260565	5.76546042159721
Merged-chr18-12731559-3	13.6280732823481	0	1.37806124703216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38427676-4	11.9023012653134	0	1.34335045706716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57424383-4	8.53484068574458	0	1.36399935107836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116642135-4	9.74963769903084	0	1.35933768973407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10328617-2	5.86703908056476	0	1.35560980836979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21607108-2	10.0448480685333	2.13160994830927	0.831909564181243	2.56230970298699	0.0103978551700262	0.206618626402439	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.29146712840181
Merged-chr14-102883998-4	11.5194730997506	0	1.35304642383817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55388283-4	13.6585929177341	0	1.35663037997521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47636701-4	18.3522949887812	0	1.33787053415292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48434884-1	7.84953724726924	0.569339821646752	0.824364355425883	0.690640998606277	0.489791175998693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52675820545023	2.75591956618435
Merged-chr1-157380918-8	88.5655363990196	-0.167088387796245	0.327249996781587	-0.510583313795305	0.609642862428016	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29782713772255	4.98477430713034
Merged-chr10-37192240-7	20.4003917455042	0	1.33833523477749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62043936-6	26.3674716509331	0.229221756686306	0.479315494658819	0.478227303812633	0.632488431116554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06657444342941	3.5645979370948
Merged-chr6-125279921-6	16.9793805262546	0.0461111209948902	0.754502170683395	0.0611146299991752	0.951267917875906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85297260998396	0.921168194051549
Merged-chr16-76399858-4	12.3428780854244	0	1.35436404002716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154935241-8	44.7487134385774	-0.0566948327965945	0.290260336685206	-0.195324078529135	0.845139248147469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21174931318451	5.19853981007712
Merged-chr10-7600805-4	9.48048987626302	0	1.34858180162684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33261556-6	29.0376248389218	-0.241597203455462	0.811170827492939	-0.297837638222468	0.765827086309844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	1.30139522650344
Merged-chr17-87602346-8	30.9976671297166	0.140989222062333	0.304943426716418	0.46234550316589	0.643833573309996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9536996629991	5.18840292932281
Merged-chr13-109406523-1	2.8471718298269	0	1.43250885620476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-38724215-4	8.98386803091547	0	1.35350478110242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108371700-2	6.87893460344733	-1.09626800671564	1.00601667276664	-1.08971156879618	0.275840218424271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	0.67591700901439
Merged-chr15-62166000-3	16.6684027089573	0	1.34299715472521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26439525-10	134.056922162492	-2.01174407248192	0.275955113199882	-7.29011341429561	3.09694208952408e-13	2.3381482645061e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	7.14906781619545	4.99612533525327
Merged-chr11-89021591-5	28.1335117677478	-1.07459708437958	0.441080628804407	-2.43628265265781	0.0148390841781435	0.265079782070227	C57BL6J_F1_Control-BALBCJ_F1_Control	5.95750966338805	4.3910444625513
Merged-chr4-133775029-12	59.2574761380258	0.31649893478899	0.234945407349843	1.34711692541285	0.177942577836791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06539178333895	6.38386168898003
Merged-chr17-23985194-7	48.6241325443246	-0.043155626913873	0.413539233660818	-0.10435678987902	0.916886212073004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47954644595998	4.30753746790953
Merged-chr4-133167118-3	16.020996789798	1.72961789903429	0.636540557623033	2.71721554631652	0.00658337179733263	0.149048524586091	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	3.7294944591307
Merged-chr1-131339892-1	4.20739119445312	0	1.38290102071019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82933807-1	3.48567408852082	0	1.3849320181405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36148395-1	8.09018276218689	-1.6293145075858	0.674589563177582	-2.41526788512869	0.0157236406680638	0.274747597551294	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41510933044421	1.92627661828565
Merged-chr6-134087889-2	5.00233686843018	0	1.41824797353174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80964286-2	3.73786981493154	0	1.40318269697111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-127982212-2	8.6110433481396	0	1.37190080171143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108442502-6	21.4901221680284	-1.29232218404289	0.651720461756776	-1.98293940404957	0.0473741985319296	0.569098652066534	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92626202662956	2.02497645810754
Merged-chr6-15715194-4	10.2946699535857	0	1.36458872537192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-105762954-8	43.2959362583544	0.554677735639052	0.318752306308552	1.74015285430476	0.081832181512007	0.804833644800287	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49306277567065	5.06249621576923
Merged-chr4-46580888-2	4.99846325350996	0	2.37351921618917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8140421-4	10.8103994338305	0	1.35961855285742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10818727-4	7.507632242297	0	1.35028400489354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75170638-4	21.1463836677513	0	1.35591033760164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14801002-4	14.1325163770019	-0.00562015194258241	0.763052013771323	-0.00736535890234436	0.994123346980376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.86501351763573
Merged-chr10-80963841-4	16.1550306877723	0	1.35136523943786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21136596-4	12.7395535629891	0	1.35510787354312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63424645-4	8.33155274362646	0	1.3464083375709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35707932-4	11.6535633341614	0	1.34790473787245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37062877-4	24.267936494536	2.20042833036796	0.504112139439167	4.36495802861636	1.27147169127744e-05	0.00107710358282971	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84034095258307	5.27856835319475
Merged-chr6-3344536-8	63.5193661904108	0.262391245982458	0.348819498157121	0.752226430485453	0.451914901670802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64943834177921	6.11313820857728
Merged-chr6-87500232-9	33.263858653571	0.574691682642074	0.460677135431636	1.24749339275024	0.212216641413681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24095438322535	3.71775336327821
Merged-chr2-128444340-4	15.3947127430714	1.18020214879719	0.650748686478524	1.81360665541065	0.0697383050775351	0.730424764105921	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98733255708278	3.01320927438891
Merged-chr9-107640719-2	11.8080665177688	-0.172440130129696	0.495604093288907	-0.347939277469152	0.727885786882957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4314922584484	3.29296620811231
Merged-chr13-5624436-2	2.76589340947447	0	1.57504448507846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82270363-1	2.9045807066907	0	1.41429867783875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16034244-2	4.50326336692935	0	1.4647826317816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56699893-2	3.85592645315093	0	1.40062164739368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81836145-2	5.16666601866395	0	1.48365580812228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3775058-6	20.9223694776458	0.125406853076852	0.482374638259819	0.25997812308139	0.794880648771825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5323215898973	3.56928131251929
Merged-chr12-17716031-7	51.4722075051412	0.0882061610297681	0.352780116381238	0.250031554880623	0.802562946197876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96196004137713	4.82819068179079
Merged-chr2-14249985-4	13.6753604211733	0	1.34624503838515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16313480-4	15.7018195194135	0	1.35750510455354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126809193-4	9.89047739645984	0	1.35585648081111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71294249-5	23.6116083975626	-0.519527998797801	0.343678557582957	-1.51166835211242	0.130618253577236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77139242331169	5.28271684251416
Merged-chr5-136173775-3	8.5905576800025	0	1.37411130289802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142470197-4	11.7744993095708	0	1.362267403002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104175867-6	67.7523751756253	2.72048466487261	0.291690348315062	9.32661872628762	1.09302214185293e-20	3.30086614494352e-17	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06598440137716	6.72485118075641
Merged-chr9-96675634-4	12.9160101770918	-0.73972820275849	0.549091075794314	-1.34718671522461	0.17792010544173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63577467008837	2.44856411326546
Merged-chr18-30513330-4	9.78600989698472	0	1.35089363479319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83631268-4	10.7236673578347	0	1.35562800961074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79485728-4	9.68266156076447	0	1.36196220504604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45028326-4	9.62310950177186	0	1.35823009371945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41596909-4	9.80422002318078	0	1.35456617088394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90965906-9	36.6664932403723	0.0995202473874083	0.261396973801931	0.380724558283593	0.703407643999417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52271792501765	5.54796739176951
Merged-chr11-108225457-4	8.10026813634511	0	1.35319846473196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39817226-2	6.8747102528127	0	1.37592408240479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98660643-4	11.6175975295013	0	1.35490959299351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31108983-3	14.8659070535491	0	1.34170100758367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33017020-6	25.5892823240787	0.916700595051614	0.519959137870836	1.76302429995823	0.0778963913434181	0.78124906587396	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96797672098361	3.66968404400471
Merged-chr11-4544531-4	13.7635004309181	0	1.3445723259704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91778623-1	4.70055200567267	0	1.37039520226781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153147886-4	9.07064074077921	0	1.3558605853812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150600974-4	14.8251118446846	0	1.34365474172349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105356593-4	9.7124023381833	0	1.36031640257828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166460099-4	8.81570819631987	0	1.34626109785758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52930363-6	19.8200008920302	0	1.34462991391362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127763278-7	33.013498699652	0.802319844389527	0.291190899226264	2.75530535645656	0.00586373820165812	0.138225041155218	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04702297140557	5.84389977285894
Merged-chr7-75669634-4	17.0672928871804	0.834739779547677	1.14255376637251	0.730591245782585	0.465028860769397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.02748994520012
Merged-chr10-117715310-4	22.0277089668715	0	1.38141340930554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21200228-4	8.59119076341104	0	1.35281277846809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44710058-4	9.80469372802541	0	1.35379511157067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39607331-3	7.53892438899126	0	1.35806890109023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-18453191-5	22.091057177553	0	1.36036688783274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79135669-3	15.6944713401644	-0.0364348913032315	0.551022343733267	-0.0661223482452257	0.947280418458272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74491462548817	2.71924508138375
Merged-chr11-80168833-9	36.5158737510532	0.454505716218347	0.382942581081361	1.18687693318122	0.235276167130413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81659872172966	4.10605639870869
Merged-chr3-60528391-4	13.0041368401507	0	1.35002152440568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127079236-4	10.8407611498652	0	1.3519492871956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95797375-4	12.3894943037389	0	1.34408471256256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90461529-4	7.44916359525849	0	1.36296090165506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45005535-3	4.47140492021355	0	1.41453656541917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38105662-5	18.8023024164381	-0.409446890621172	0.560087622090521	-0.731040777321442	0.464754246175533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66904529407455	1.98745731428397
Merged-chr13-91637009-8	49.8257489262295	-0.761313709620557	0.252905040627678	-3.01027495431121	0.00261011291006736	0.0762402620517742	C57BL6J_F1_Control-BALBCJ_F1_Control	6.33561932029747	5.60360196646786
Merged-chr9-44986630-4	11.5702792581067	0	1.34134994931719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80454965-4	12.7663265670519	0	1.35795841487946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68867359-4	13.1086131343137	0	1.35489486728185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60541829-2	5.80746447768039	-1.27337613239578	1.38047146259116	-0.922421192253864	0.35630891984869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr15-83016174-2	6.93630497451687	0	1.37729216972227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29082158-4	12.4575496263161	0	1.37334827877105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-106681097-4	7.73514998340077	0	1.36099352518753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103019239-4	8.52203986788693	1.74737300736189	1.24207096344275	1.40682220162248	0.159480117450198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr9-32507684-4	18.3268903794042	0	1.34862870669606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176818326-4	12.0585616010023	0	1.36030467844246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99814992-14	75.0513897980217	0.764176429760609	0.267625880943175	2.85539061867812	0.00429839261721619	0.110319322133737	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76873558915732	6.56241522359342
Merged-chr2-30514981-2	5.15134322764821	0	1.41795707841629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100087527-2	6.91932987751071	0	1.39251765634768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-47306541-2	4.69872429168028	0	1.4063281078404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43538900-4	17.7282201361007	0	1.36341416509643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60358919-4	12.906283184924	1.33320375983481	0.619767043592997	2.15113690477277	0.031465395359012	0.436689262049973	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9450324219075	3.5581050069257
Merged-chr15-58472535-4	8.22397118310148	0	1.35475836983597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148477736-4	10.6003826690627	0	1.35619541576506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107783427-8	37.7564581091835	-0.443562005199565	0.330122636155791	-1.34362796312531	0.179068722396063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67831852207232	4.32246373771266
Merged-chr10-94333527-8	41.9533844055157	0.243405881135184	0.323472488508737	0.752477845202004	0.451763748211217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81940516818439	5.19899462834721
Merged-chr15-25559927-2	2.02753892214534	0	1.79624487381415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-39978348-1	1.95642836875938	0	1.55327464495842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90373590-1	2.22858200453687	0	1.56554578216463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88578809-4	8.19700231215799	0	1.34918083767855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-62458510-4	11.2925589753633	0	1.35825077755212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20403402-5	29.3351935569031	0	1.35328998932582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61267124-2	10.7004104208724	0	1.35622282778766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65765159-4	9.17433272201763	0	1.34843669098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107428185-1	4.08234712629057	-1.17861572567204	1.30481147655739	-0.903284303401207	0.366375025054276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.413263464506793
Merged-chr19-24995036-8	40.5665158017772	0.338505876201715	0.29094473654321	1.1634713871218	0.244638300571263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80271096231938	5.03721795014569
Merged-chr10-116512725-1	1.91387943923874	0	1.56580102886427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122601807-1	2.96546427817243	0	1.47797243276309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153338506-1	2.56318014450724	0	1.46399890762024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20804677-4	9.9300824623888	0	1.34970084484139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12479436-1	3.25361681494428	-0.512946169764569	0.961045912624226	-0.533737424015385	0.593523213042715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30731504751027	2.00766992357472
Merged-chr1-86217916-1	0.941190645724601	0	2.43283870539798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59418867-1	3.68718329618601	1.31708280509012	0.959368329900894	1.37286458604088	0.169794447786726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8171389792189	3.36821942342533
Merged-chr14-19768883-4	10.3594646671284	0	1.35578468556488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129607138-6	17.0560243923294	1.75661047989977	0.637074446354347	2.75730801941901	0.00582794243896156	0.137560192374951	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66398411766936	3.31736738336491
Merged-chr6-124202354-4	7.19906082724757	0	1.35418449900012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110703423-4	9.22087693934176	0	1.35299835404696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13299408-4	9.36691876957145	0	1.40231173064007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143424084-4	9.10276709171092	0	1.35529602412371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126109805-4	9.67225235000308	0	1.350925732116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125618203-8	65.7276674397166	0.0487111916056613	0.368037782529076	0.132353779742201	0.894704471396197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37805506163574	5.36316754554172
Merged-chr8-72169418-8	47.7670122223958	0.432853624116055	0.316112855055544	1.36930092273533	0.170905229693053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86572751438526	5.32087573092721
Merged-chr15-76770619-8	40.9420951143472	0.365280105369648	0.305727851070522	1.19478845022003	0.232169694007033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00220760323039	5.6252969306215
Merged-chr4-32238698-6	31.2748448733297	0.332800840088065	0.504332706146891	0.659883517431712	0.509328582295781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82596652232299	2.99879258628133
Merged-chr14-105923017-3	5.70343371362432	0	1.42473185239907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112671873-4	16.1552969972278	0	1.35352814514022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91008384-4	11.1584430441435	0	1.35070369363656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35330891-4	14.0880908685677	0	1.36542061515955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6557101-4	16.3757430498138	0	1.34666942293748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72881438-4	10.9889242885671	0	1.37323385842904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57085202-2	5.42317468681175	-3.1834141391373	1.11858852598707	-2.84592060903555	0.00442832338664865	0.112801888929163	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	0
Merged-chr6-54729905-4	8.74577622283551	0	1.35568996583452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39026602-1	3.41206687445087	0	1.37502883658624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64306330-3	10.1139890011229	0	1.35605559505387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102717194-4	9.75316286741163	0	1.34839176431938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4258413-4	11.2720655879148	0	1.34028356362103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89081320-9	36.9825548863034	-0.553358878219652	0.279245521812745	-1.98162131527653	0.0475216396968659	0.570123330894269	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74746418903904	5.21445487488001
Merged-chr4-10990205-1	5.42716806275121	1.65290315756667	1.27761324063741	1.29374297713291	0.195754215066497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.882176137820124
Merged-chr6-108719079-5	40.4081149406305	0.549634277189687	0.376211959549907	1.46096970932891	0.14402375434224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78936521220572	4.2636246687544
Merged-chr2-130525446-14	74.755941768182	-0.136465021259746	0.217952427769814	-0.62612296938427	0.531234287394355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.31447749719475	6.22085640237878
Merged-chr9-24542095-3	25.0124851798827	0	1.38142466869983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83747858-15	192.188817435313	0.360717907668898	0.161346018579952	2.23567901361105	0.0253728046967106	0.378600134644109	C57BL6J_F1_Control-BALBCJ_F1_Control	7.98336117768281	8.33977259021024
Merged-chr3-121163616-6	24.9423471613699	0.821108821787793	0.399912424592502	2.05322158376168	0.0400510920269985	0.507609538702637	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59605922976184	5.383230285392
Merged-chr19-32884681-1	2.93921860859444	0	1.49321598065579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25447350-4	17.0997092295252	0	1.3486727934829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55259959-4	11.1692183243885	0	1.35143434650386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20058273-4	9.67546207099922	0	1.35412935022257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80478238-4	11.6866852221709	0	1.35248090413418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125067619-26	276.252764349862	-0.0165304473804791	0.12879172864076	-0.128350225243017	0.897871819761097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	8.4063757071257	8.37077063234752
Merged-chr1-191422907-4	8.28668596461617	0	1.34553389762694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64771385-4	14.5211921670882	0	1.35135289209219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70792327-3	17.885387844191	1.11776119027204	0.523672549175901	2.13446588336747	0.0328046634945234	0.449156150289914	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68904493538903	3.80535402578261
Merged-chr2-51014459-4	7.15129323725203	0	1.37009384255818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76355484-4	9.307102022844	0	1.34428942789774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75822688-1	5.22710991806409	-2.38218057855559	1.19158751505913	-1.9991654397599	0.0455904565641208	0.554553625000595	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91520759840552	1.07599819202159
Merged-chr17-34298782-1	7.03379037776966	0.822977885352094	1.05103862951921	0.783013927593278	0.433618933368189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88787614081909	3.02953845758815
Merged-chr7-96554433-1	3.14935161813537	0	1.43201369994288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55430770-4	9.99529597048494	0	1.34828725239644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45374295-3	11.1371960912067	-1.50239251084683	1.22821185190653	-1.22323564010125	0.221240707924866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.376242425970964
Merged-chr2-157448008-3	8.31391434801119	0	1.38184319993323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151661795-2	5.02633484161295	0	1.38830015178287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64723391-4	11.5540202081459	0	1.36106284507738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57275473-12	53.063407829315	0.145918449783133	0.301451342598315	0.48405307644481	0.628348201494063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64364189449112	4.73778919991482
Merged-chr12-82326638-4	10.2766839247918	0	1.35145269591869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180225999-4	9.02393161734609	0	1.34972114817235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130899532-4	9.51496883294759	0	1.36351774867747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109267160-8	31.7203435006617	-0.443162585346456	0.330499147725559	-1.34088873873421	0.17995657900012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35343052725198	4.87903859578164
Merged-chr3-115749200-2	12.0633564028263	-0.0319590838483586	1.02323375211389	-0.0312334144395986	0.975083392037224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.730937814817307
Merged-chr3-27766249-4	8.95518308733702	0	1.35322635121249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10278898-4	17.3005699322079	0	1.35345077263743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94050246-4	6.93288388350424	0	1.38113662657079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13574332-4	10.0537167643863	0	1.34280659653444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20712429-4	7.98393379649399	0	1.38955230977166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28907411-4	11.2326508624985	0	1.35441838794908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64197968-9	76.2694312067924	0.10098096623403	0.190302966666082	0.530632643321939	0.595673370310324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41706821149074	6.45813368635786
Merged-chr17-46856832-3	8.39562600338244	0	1.34658094887724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-3259259-4	17.0656928345896	0	1.34728364813328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19088599-4	8.61119163618446	0	1.3495618178709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55409334-10	123.201308355565	-0.332997049822499	0.173188560777056	-1.92274275118645	0.0545123649787362	0.625947961106701	C57BL6J_F1_Control-BALBCJ_F1_Control	7.09344790818341	6.74883834718188
Merged-chr17-78891193-8	44.6523644381257	0.716457911309351	0.340121434558278	2.10647680067511	0.0351629562308053	0.469521772967415	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78794504932108	5.53933388659622
Merged-chr11-11554256-4	17.3853033411925	2.99666312187911	1.06642935483964	2.80999684440392	0.00495419857192924	0.122411490987046	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.60203569569708
Merged-chr3-95982352-6	39.8433697362081	-1.65867223526991	0.307651718097826	-5.3913959770005	6.991242582173e-08	1.27102660710482e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.23205548287048	4.64853812065708
Merged-chr18-38542694-4	13.3337857337187	0	1.42905688350847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78396422-4	8.80826897957757	0	1.35435611819013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88450282-4	9.88958393566318	0	1.35567019594669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80208951-2	4.92794558731392	0	1.3867303037635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112759104-4	8.99061932361201	0	1.34519254294398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135736555-4	10.3352204192574	0	1.34103311856061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23375083-4	26.8948750356158	0	1.35917123285991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126884336-4	9.16357867722613	0	1.35052741052495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135705524-4	8.8322536548023	0	1.39362504394235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166771524-6	27.1288600775044	0	1.33845846092437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64377945-4	8.24507963103741	0	1.37203555895769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128548408-5	25.2129475361633	2.52596331079032	0.456503404677152	5.5332847135647	3.14288682592163e-08	6.30421346753777e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90517905380964	5.85653469614003
Merged-chr10-122534916-4	8.62508258514712	0	1.34570501279983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79532557-4	14.0391746614409	0	1.35087698934444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63391491-4	13.761950689535	0	1.35429816318609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31414121-4	12.5398126040314	0	1.3511152768626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122208532-4	26.3982181338604	0	1.34443013806587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177711565-4	13.7099688832184	0	1.34846468781148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32650576-7	24.6198821629708	0.355600570669659	0.399092809143029	0.891022244758655	0.372917236554231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12905979346195	4.18332840607787
Merged-chr19-40707702-2	9.75025426677267	0.130380433925504	0.665835073574828	0.195814908375883	0.844755040771752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74889511907211	3.33198714933709
Merged-chr8-94377218-4	21.8850934478377	0	1.34339928642028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5804651-4	9.9300389316258	0	1.35782688292072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31917967-3	19.9538839913113	-1.45056552225984	0.742150622610344	-1.95454329359424	0.0506370000770272	0.594124042129747	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43000953671338	1.41398715281163
Merged-chr7-142342433-7	41.3017949505801	0.662942558170608	0.378788642285322	1.75016482587999	0.0800898763592753	0.794163733858782	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66813819010782	3.86212546373821
Merged-chr7-114890305-2	9.21924009401598	-0.289781765775689	0.780992786545594	-0.371042819815816	0.710605638881317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49632546760905	2.25412887041918
Merged-chr12-55484667-2	8.67029743878023	0	1.43489913028091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30405969-4	11.2092264210102	0	1.35242568825031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-188984202-4	12.5216256227238	3.11464082197352	0.680097167376026	4.57969974200971	4.65643913732023e-06	0.000473120327225403	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00797577754665	4.90105173388735
Merged-chr12-102296114-3	5.44488765857572	0	1.39723738293488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32191130-6	17.9223875773261	0.885220610022469	0.596596921688273	1.4837834018946	0.137866391848189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10370544471103	2.77676716728771
Merged-chr3-14869994-7	31.5070260038034	0.422404696732881	0.359472972941828	1.1750666351243	0.239968057810397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96968723476629	4.66917712472366
Merged-chr4-133941693-10	55.7682427903216	-1.20886818431801	0.337712040128973	-3.57958272336497	0.00034414329636522	0.0162389630617335	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43250366733102	4.1677678882484
Merged-chr5-105767108-1	5.26047149741528	1.98460893011208	0.991122842634647	2.00238441164014	0.0452434037092139	0.55155554658649	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	3.00717000215863
Merged-chr15-75021534-1	3.95416946481792	0	1.46854613780339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12301370-4	11.2747981279183	0	1.36467239309838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3843634-4	9.70945178676333	0	1.34574411473481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32533316-2	6.7460305883926	0	1.36976223773275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8660952-8	45.6203131918375	0.0221347340259478	0.375567944354542	0.0589366966980872	0.953002529100786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03223576732336	5.77061833574333
Merged-chrX-36108783-3	8.39755887463334	0	1.36496494073575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3667045-4	14.3716957945831	0	1.35550624838772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168556247-4	10.1073517574509	0	1.35145065975729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35745416-3	11.0076940063866	-0.975738910888879	0.8771903956067	-1.11234563872991	0.26598956810688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97442138359878	1.21849460895724
Merged-chr1-62725083-3	16.5943428940619	0	1.36792061396605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88631660-4	8.57067922413924	0	1.36401576631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-127610940-4	12.703843058793	0	1.34098198645578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59614400-8	28.4346985233463	-0.181435156416709	0.362759810824572	-0.500152307402238	0.616967837225135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79417070862801	4.66365580178461
Merged-chr17-34296877-7	40.1962737517354	0.506766056624644	0.290905568760896	1.74202941106697	0.0815032979917345	0.802470164016065	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73598597808583	6.22323492971426
Merged-chr1-7100728-4	9.39992875843356	0	1.35152920657312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105001571-4	9.72552749650952	0	1.36213488743807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106664665-2	7.18591798656917	0	1.38904468925658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122573766-1	8.13571928973682	0.835389303144275	0.856214640515813	0.975677433687665	0.329224338457799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	2.48318022225676
Merged-chr12-79748991-1	2.7807571027368	0	1.42695624849276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45758995-4	10.2431007474019	0.730199730590314	0.92563766151031	0.788861301731056	0.430193075781071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.20027794713453
Merged-chr13-24488895-2	2.86456375209786	0	2.34702514350159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106756144-1	2.71617562495407	0	1.45786387409411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-42790534-1	1.46893863092824	0	1.54849929400008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45491568-1	1.15012619147388	0	1.62473550946593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69680824-2	5.15739598962074	0	1.40878442367671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-81321920-1	3.55035493399455	1.41564390488521	1.12138997910253	1.26240106587913	0.206804505886235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72678076939999	2.79822070649785
Merged-chr11-20929242-1	2.15598888720101	0	1.52642675730506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122343966-4	11.4757833208582	0	1.36019613199146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157447462-13	62.4562112567386	-0.365659551465658	0.303191764125285	-1.20603391889814	0.227804412285156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66326696605173	5.36910042962795
Merged-chr9-31841327-1	1.84769038681249	0	1.50652201150469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87623825-4	9.40790738902614	0	1.34892773702344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115413831-1	4.73723761334972	-0.0685687427847148	0.898032838138567	-0.0763543824598256	0.939137161130945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81518459389541	1.39207274064238
Merged-chr3-10065027-1	4.6106048780366	1.36695374948611	0.850692709785224	1.6068713576154	0.108082590729697	0.956571401738133	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88772579123251	2.91859077367832
Merged-chr4-119943436-1	1.77464701141689	0	1.56703245211982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102700313-4	9.4913108834211	-1.20067146248747	0.976699906757139	-1.22931460746624	0.218953872563219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69757189012738	0.859510663435501
Merged-chr10-97313158-4	9.98935706289555	0	1.35875547486577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70816842-8	55.8666123489097	-0.683743063006588	0.289094026316185	-2.36512345730302	0.018024061407029	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	6.46380466861637	5.76922829789415
Merged-chr13-98874396-4	10.7737144317608	0	1.35319551711385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34138236-4	9.54225990555604	0	1.34475846822172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101029601-4	11.9974834269348	0	1.34718896532789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112255310-4	7.56771768806771	0	1.38676391231292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67514275-4	8.50638593849251	0	1.34468684706444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89309239-4	12.701718094807	0	1.36378383287204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60923267-4	12.6460154730019	0	1.35317497378864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55390387-2	3.99302117761764	0	1.38508723091987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27376229-6	45.62144508173	0.439155114151066	0.347800072465251	1.26266539002789	0.206709457151294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22507310865502	4.91882976950218
Merged-chr7-74527752-3	14.4037868336153	-1.26882633172388	1.3705953907854	-0.92574828447132	0.354576808680929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr18-5101055-2	5.97133801444301	0	1.38995888275655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77825298-7	30.6198532880367	0.799526073232578	0.448643400818622	1.78209703246211	0.0747334096641167	0.762325655081952	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51339090749546	4.49587991508916
Merged-chr17-67194126-14	53.2050882634586	-0.908539230851411	0.273785358585266	-3.31843614847088	0.000905230161076147	0.0332033780876777	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98573431224482	5.08250611828381
Merged-chr12-3799757-4	20.747821335078	0	1.34790473886391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51738833-4	14.0861308322872	-1.83858334031851	0.916526205799602	-2.00603466511302	0.0448525496367241	0.54851287867327	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41491760955135	0.878778741524029
Merged-chr8-125198605-4	17.258900583332	-2.63886362486872	0.583817732946364	-4.52001279843131	6.183589303523e-06	0.000592828449647631	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13404849322033	1.66432563910922
Merged-chr6-142715084-4	10.522280400681	0	1.36534702885213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134098783-10	105.098321780653	-0.158465073106205	0.193021588549821	-0.820970722999221	0.411662944746796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.91477708793397	6.73321377776544
Merged-chr15-66801719-4	11.156703151028	0	1.35575807820149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171184516-8	36.9701386457583	-0.303719593985868	0.359195200252944	-0.845555825278258	0.397800577612867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27357461907227	4.88945112883532
Merged-chr10-80152933-6	17.8447674648539	0	1.36236055929884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86801395-3	7.14304144859696	0	1.38404962599323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27116822-3	12.2347292661519	0.242084739602432	0.645461345875379	0.375056912624435	0.70761814060764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04537585383933	3.0092354779036
Merged-chr10-19107964-9	35.5836934903345	0.0546064273000935	0.319724509497734	0.170792121585788	0.864387224118055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12762538314882	5.19385753853728
Merged-chr1-86179020-3	7.86601464793884	0	1.35605261476769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107264018-6	24.5136147616871	0.808393237292923	0.605989115185242	1.33400620083054	0.182201824349412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37076189257221	3.07618370192346
Merged-chr3-65974799-8	104.352070533577	-0.34575076405736	0.32775736123978	-1.05489854674665	0.291471726988454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17390310342423	4.84140808789284
Merged-chr1-170282614-4	15.1084219955506	0	1.35964015136546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81706763-4	9.1748772233378	0	1.35322255100635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104234500-4	17.999682055675	0	1.37153353518012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74572897-4	12.3177095660121	-0.0449369714827304	0.625298559019219	-0.0718648249457253	0.94270948326891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52654123867406	1.87707356607014
Merged-chr1-121508927-4	10.2632018372332	0.636496550864576	1.02603767140798	0.620344231602279	0.535031180080405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.13341594473881
Merged-chr18-67478719-7	31.0045545173545	1.01794944266067	0.392232672395644	2.59526937530046	0.00945168099717824	0.19315185237805	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09993541231821	5.04028899304595
Merged-chr11-106675416-8	65.2163302197862	-0.191644654604274	0.310026597595922	-0.618155526301188	0.536472823173969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11743856754922	5.02451667084622
Merged-chr5-146767802-5	26.6720068927053	2.41700498111915	0.756862741855314	3.19345219080846	0.00140582614277318	0.0469117883947253	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	3.75714536832682
Merged-chr3-117995580-4	11.8021824275276	0	1.38306003010654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82969592-4	14.8275025551493	0	1.36469949654238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59003432-3	5.18938176410624	-0.0350527259534944	1.22590236657997	-0.0285934075250094	0.977188869969242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr5-137883548-3	6.3442895446394	0	1.38238428050584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31408064-4	12.5679347103958	0	1.35533963157794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107056515-4	8.07324199078436	0	1.36341648330968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19506613-3	8.24403623259816	0	1.36374476704559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85342525-2	7.90654342122633	0	1.3959508875183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167700826-4	15.887991247711	0	1.36502390560013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105620619-4	16.4481701411522	0	1.36671947006216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108223350-4	15.5620559740761	0	1.34515087463503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146099973-7	31.8359545770336	-0.137668673089161	0.432226697812638	-0.318510341415416	0.750097851484564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44008557558567	3.72450827107534
Merged-chr7-101550917-9	79.7008479061025	0.217970677318945	0.210955697221755	1.03325333323335	0.301485360011037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.59239571101857	6.80279105393799
Merged-chr5-136007974-5	21.1231775632663	-1.39592580638318	0.680414163072217	-2.05158252450283	0.040210251972735	0.508796342408265	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94059065734247	1.95465925600843
Merged-chr9-94605154-2	9.97097818501015	0	1.36079309798134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98946248-4	8.08504650559464	0	1.36446811673855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99427278-4	8.1144067615325	0	1.35270046225318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41685760-4	9.03121634333159	0	1.35589825180283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91293901-6	40.1879566284871	-1.80662822595219	0.298775062389014	-6.04678386310536	1.47765774386131e-09	4.09816312747739e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18466018599818	4.36800226045316
Merged-chr12-79140960-9	107.836762731061	-0.657818557815806	0.206439447803541	-3.18649640276998	0.00144007278564995	0.0478489709994779	C57BL6J_F1_Control-BALBCJ_F1_Control	7.37534626772896	6.6957922967891
Merged-chr10-40099455-4	16.1416327852569	0	1.38079487967756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82811437-16	74.423799175649	0.634395926839227	0.234353797469735	2.70700084098767	0.00678940853903492	0.152948801812432	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60994694402502	6.25804425187236
Merged-chr19-12457730-10	59.3514814154689	-0.73667929597123	0.25888322244049	-2.84560462832067	0.00443271944108134	0.112810535382713	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05843363084008	5.28682423175353
Merged-chr4-139248906-4	14.7304389683588	1.30913926047848	1.10151941266008	1.18848496488774	0.234642399837759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.2636608194585
Merged-chr4-117167468-4	10.2665047509776	0	1.35517584369066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7863737-4	12.4408516487967	0	1.35794877968554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129363411-4	13.6184638880898	0	1.35376674177172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98961371-2	3.71667001936343	0.583692587310445	1.16980214918481	0.498966930191739	0.617802681342027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.14143228603163
Merged-chr1-128044362-4	8.49397970492574	0	1.35859966774577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70091355-3	6.72537302335286	0	1.36807559005228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139273518-4	12.9973941193304	0	1.35423889540846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152122871-3	8.06151678412409	0	1.36939689095146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-43306025-4	11.9013403686017	0	1.34849897560058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106376458-3	6.30745639861763	0	1.38245349574829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52772555-6	21.5218985583037	0	1.34136705996498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71143478-6	30.2708466908957	0.371783958685432	0.489140155868062	0.76007654294021	0.447208833060637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05797500272467	3.46647118554936
Merged-chr19-41371504-8	68.2395923539879	0.7938441632916	0.285272283080236	2.78275952616232	0.00538987388253907	0.130448866598816	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58665756674822	5.4488324840867
Merged-chr13-102706087-4	13.8702887667275	0	1.3988078272505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89874682-3	13.6200499108456	0	1.35033297992867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63097427-3	8.94754563356467	0	1.36004734023176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59530896-6	21.4432973652942	0.950117522862436	0.643543538562535	1.47638421634174	0.139840777437886	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	2.06823506057597
Merged-chr9-27023786-2	5.6256279927449	0	1.37643615466573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74689773-3	6.12087512156214	0	1.37067090281149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123128598-4	10.2223119435168	0	1.35344706775766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167246468-4	9.628904352421	0	1.35255337253278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31467006-4	13.8193025726841	0	1.34792815881992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76786612-4	7.65664939164249	0	1.3515644726214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140105953-2	5.94432378805083	0	1.42329600660933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80279651-4	8.46758851424825	0	1.35303092423125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-31506971-2	5.0007939078926	0	1.37270005964104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59036894-3	8.02926159022539	0	1.39655130012076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123945493-3	10.0576939617901	-4.29052316600955	1.05130918264751	-4.08112402785709	4.48184297841715e-05	0.00301894055097618	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99820822161176	0
Merged-chr7-116597116-4	10.5265053897694	0	1.35686841087999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143847100-4	10.0601589763936	0	1.35512365743187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83081700-7	25.2082994767436	0	1.34939671331036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78021435-4	16.3101933103476	0	1.36871610660356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52823946-4	6.58408075642896	0	1.36206001795879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20770440-14	89.5781108489781	-0.109008624349933	0.2228594680796	-0.489136159613364	0.624745302977595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.85830314561796	6.7507349495576
Merged-chr16-26626312-3	9.17467041469694	0	1.39161693834974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41923660-6	17.221807044239	0	1.33861295533335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83422018-3	12.0288709257241	0	1.36880865944847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87636030-9	56.2708741199235	0.0208693329636579	0.279217221284662	0.0747422844036601	0.940419763654763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12107931637718	5.13869247915596
Merged-chr10-25449573-4	9.02623282452189	0	1.34391032312918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43181696-4	8.73583541452284	0	1.360960509991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36230823-4	8.53174760821395	0	1.34974953591553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160157279-4	15.0968586554048	0	1.34368703466131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8997750-3	10.4641610210072	0	1.35782817872494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58211148-8	51.3444241895018	-0.267907471072143	0.269678975665866	-0.993431061545125	0.320499930649441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84999897467616	5.61019955354334
Merged-chr4-129701715-7	47.0023601925338	0.450443007004785	0.319961721817281	1.40780279730466	0.159189471843955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64172186915699	5.17334641014763
Merged-chr6-49107318-4	9.75614823987516	0	1.34533446718322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72225994-4	13.0075452112656	0	1.3545073380392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8993443-4	12.1811075100413	0	1.3559439566585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105835513-4	9.95708112583831	0	1.36029092749534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11766627-4	12.4807844305467	0.885748830244609	0.986112731877832	0.898222689568056	0.369066839246165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.897114879832661
Merged-chrX-160116854-2	6.08619616201119	0	1.36074399272371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4349850-4	10.3210011824198	0	1.35383921063094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120469959-4	15.1661874595626	0	1.34456237489757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16997040-8	62.4292318083373	0.238309303833411	0.26541772198739	0.897865078672982	0.369257484186603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9897507677776	5.10378451641577
Merged-chr2-34778623-2	8.5089036771604	0	1.40187474303201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105894922-4	8.0938339551607	0	1.34805286573101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3132266-4	23.6026988489812	0	1.37178309585222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77448200-4	20.6958904216875	2.92406927355717	0.572937072776153	5.1036482233357	3.33167333962806e-07	4.88157496142431e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96073424694151	5.66835836051852
Merged-chr13-45358421-1	3.63134618101666	-1.23537956455619	1.26051401871455	-0.980060154996141	0.327056425882729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56112970471021	0.723581231604105
Merged-chr9-61368599-4	18.1374874628631	0	1.36316500534769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132963684-4	9.23948870034299	0	1.37758781732709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29671250-4	19.2702500203053	0	1.38832192506833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131915909-4	14.7422474345423	0	1.34194106907891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40963160-6	28.1850335429516	-1.03292664239176	0.601694667168077	-1.71669569094456	0.0860347878932943	0.827892553565513	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57374258684139	0.921168194051549
Merged-chr11-45750499-4	9.91718401445208	0	1.3502748617973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129789699-8	33.8214892544947	-0.37536587171766	0.328746149538244	-1.14181070179802	0.25353271300354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83001239772454	4.33351673130023
Merged-chr6-125353024-4	11.7156315391914	0	1.35116100835882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44757916-7	39.0670406507599	0.243107489776702	0.347968929822778	0.698647117432346	0.484772590181764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47727855203268	4.83457438157824
Merged-chr9-25539515-4	14.1159498329934	0	1.36082737092827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186182775-2	3.31978884219154	0	1.40309646567861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48750589-4	10.9116081434125	0	1.35061950733954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43779178-4	11.1022083869031	0	1.35151506029083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84228699-4	8.32202345348875	0.624476791765821	1.36608060236108	0.45713026792599	0.647577415799653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr1-154786396-4	11.5245287727313	0	1.34613315548385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81351975-2	9.46229970870339	0	1.34618430660824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160452175-4	10.654581552258	0	1.35430196603271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20293990-1	1.63865521974381	0	1.64617108159638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-134556245-3	18.8024122008974	0	1.34496409355382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102656766-4	13.4660133245428	1.9897242579671	0.899924106289254	2.21099117587985	0.0270364481233238	0.395818551989161	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	2.31839445878889
Merged-chr11-47060234-2	22.4495929473016	0.726282894447227	0.60149575452931	1.20746138102931	0.227254509145035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7852714664239	3.31748031114223
Merged-chr2-59285615-1	2.12459930400824	0	1.5211910256776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66131653-8	41.1082181961111	-0.373993042395208	0.327260369570423	-1.14279967014072	0.253121775800349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74687117500547	4.50084821405522
Merged-chr7-135667459-1	3.37980644818328	0	1.47170384207061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87487209-2	7.98903411928101	2.13427102319806	1.22467300099223	1.74272725982272	0.0813812676210569	0.802140403737631	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.97908007631626
Merged-chr10-99633374-1	1.79459521725932	0	1.46460347423826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20748650-1	2.35814832583489	0	1.43475741001823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53390671-1	2.00113594678782	0	1.52972145953877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64046503-2	7.37901693509585	0	1.36154907373694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66908175-4	8.44533090974164	0	1.36814069390301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9128600-3	8.07823637689992	0	1.35839022526185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20187866-8	34.2475823318577	-0.110617725198962	0.323723796817377	-0.341704027589189	0.732573640793299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86128171082721	4.71293153496762
Merged-chr1-143929917-3	5.23503617000525	0	1.40139760441916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63256877-8	50.377772516691	0.069450285737204	0.306487343274571	0.226600827933655	0.820734148440746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7893356068629	4.82831520361377
Merged-chr8-105596907-5	11.1367000880969	0	1.34199290887554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137757805-4	10.8798968780897	0	1.35163700150722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3201498-3	9.88094288950562	0	1.37120032646084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105280755-1	8.37810674066069	-0.540512306266352	0.866731667771176	-0.623621273301683	0.532876336373053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16564811853927	2.09731566194742
Merged-chr11-120903445-2	6.21590633477936	0	1.36766199914402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41385629-4	9.68063119099799	0	1.36151098013611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59480782-3	7.49746441627085	0	1.3746308324963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31921211-3	9.21295405389647	0	1.35092415011652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37474241-4	11.989138045236	0	1.34703663750487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12556501-4	12.2848101618894	-0.0356111653955445	0.63253514496184	-0.0562991095106547	0.955103528219015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	2.1881845164991
Merged-chr18-32389860-2	6.06007680742206	0	1.3913574679528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103815748-2	4.81911030150663	0	1.37259182435919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36914691-4	10.5062640485803	0	1.34455360829039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-97313720-6	11.4744726052827	0	1.3479464378241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148405840-4	16.7120240482891	2.33030108699331	0.509846557511111	4.57059296108424	4.86346118618157e-06	0.000489579419666008	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63581209903162	5.3597423690033
Merged-chr6-142752693-4	9.19449162976238	0	1.35440015828096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81304299-3	11.8615266999579	1.49680466260302	0.914630963944746	1.63651212522632	0.101732450127938	0.921218433533996	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	2.01883830095448
Merged-chr10-118098129-9	104.188096719196	0.0749031364886874	0.240197584053282	0.311839674757395	0.755162370335239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.16678578480196	6.23867669545497
Merged-chr7-59163426-3	7.84171442591734	0	1.36624774996525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103777584-1	3.85345549623184	0	1.3737423714159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96163468-4	12.1056390730944	0	1.34754943326591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27975490-2	3.99763015945881	0	1.37748825903614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110421140-8	26.5664987577768	-0.660740189884363	0.357755578756977	-1.84690394536993	0.0647610628406274	0.698915207040709	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86724255487954	4.08945290455608
Merged-chr9-85369779-8	37.9905843030052	-1.06490026224099	0.281480176505802	-3.78321583942533	0.000154815051354952	0.00839042011625509	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24051434253443	5.1744162597486
Merged-chr9-99074668-4	10.279230109502	0	1.353024443942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41375396-2	4.6244189161579	0	1.39879316864105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85691506-4	9.14711158919905	0	1.35582147012978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32187356-6	31.9387164149136	-0.155188786568673	0.353211968129252	-0.439364462621731	0.66039747216209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.07016321704803	5.94412368494493
Merged-chr10-25426722-2	7.99624655471442	-0.984790569826631	1.27750303826992	-0.770871411124238	0.440783154194604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.465515277017237
Merged-chr6-134021045-8	55.0594068329205	0.462628849404574	0.329260435464764	1.40505447838443	0.160005079071666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77183778602393	5.17951477589924
Merged-chr13-34255409-4	11.7373846234873	0	1.34311145527273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115766380-4	11.9224621598858	0	1.35297128877835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135914400-4	14.9296533247136	0	1.34260024386967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116384374-4	13.5471347154264	0	1.34706492535669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3251299-4	20.7342079873733	0	1.35785807214103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55797453-4	8.14824707457653	0	1.34936442923234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11771890-4	9.15668287594116	0	1.34732827118468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53783925-3	9.16150394244214	0	1.36019235185965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137950648-3	11.5895967497657	0	1.35746585924775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14387960-4	8.30137786899351	0	1.36032571765575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118596141-4	9.59624653990027	0	1.35537942959022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14884855-4	13.5447360719753	0	1.37949331435548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8579566-8	48.2722890166345	0.190518939401319	0.300672358421268	0.633643013949376	0.526313822589929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00926152899499	5.28554629788886
Merged-chr14-16427773-4	10.6720309970155	0	1.37207516662873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55552779-3	11.243460387796	0	1.35293502814632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116811825-2	5.1860191864726	0	1.38567336317605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83601966-5	31.662287024604	1.46142438032489	0.379271326428685	3.85324246387416	0.000116563858755621	0.00667681222138759	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69358325332628	5.13755057517808
Merged-chr1-170997890-4	11.4175278553387	0	1.35415026363251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-73548412-4	21.3750101757928	0	1.35422894599978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54952873-2	3.00239097655847	0	1.46956158522192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35590595-2	5.27773716489013	0	1.38870551620279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113401944-2	2.90598830562274	0	1.48760054884032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35063537-2	4.23888537671402	0	1.41682557693435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80063420-4	12.5369083896985	0.139193061616468	0.866932687371704	0.160558095967592	0.872441461179242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	1.16492870185157
Merged-chr1-134063416-3	9.40580652999465	0	1.34909926541622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24271803-10	58.004268518236	0.164239954548536	0.373860857101439	0.43930770346459	0.660438593105058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60490454108354	4.60545096428311
Merged-chr12-109507837-3	11.1384170289826	0	1.34432509344094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-119779449-4	7.71464892515348	0	1.35190961842527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79156989-8	50.7127903779517	-1.06867445472759	0.221129599914566	-4.83279694414711	1.34628086262145e-06	0.000165197474968937	C57BL6J_F1_Control-BALBCJ_F1_Control	6.68654655249753	5.55942968606358
Merged-chr1-84864845-4	7.225757778757	0	1.35316395318587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7037412-2	4.89361274648583	0	1.38752969405893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15537765-7	79.2403680241603	-1.60502404172924	0.34523746149689	-4.64904368943662	3.33477576950657e-06	0.00035613963861416	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43960178697053	3.78848474651321
Merged-chr3-87338083-8	46.7809700350824	-0.0437525231737515	0.35041824388744	-0.124858005931351	0.900635964544416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55510195554191	4.67203656872596
Merged-chr8-71495157-8	32.8557019267977	0.26162063898042	0.381979578869365	0.684907396763985	0.493402358130408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63576279747867	4.82305517070027
Merged-chr15-66708744-4	7.32658801281047	0	1.34978036343474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8770623-2	5.66418211864956	0	1.39617583106995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145599386-4	24.4922856322866	0	1.36345405901236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4233201-1	4.80189886498957	1.12292640239733	1.35321351400247	0.829822042698931	0.406639406180733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.67591700901439
Merged-chr1-62283812-4	7.14138387422748	0	1.36236740199994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32281774-3	15.9052965301218	0	1.34580817200158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49250244-4	9.89170171239996	0	1.3505614493156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125576296-3	17.5785017570734	0.936911724078008	0.747285521410749	1.25375334759501	0.209931670869939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17564474993106	2.72551576778547
Merged-chr15-101979740-1	2.98799282626066	0	1.42242322743365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-30606936-10	67.5425667527658	0.352727749984362	0.263143925067945	1.34043660667175	0.180103441204781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36147880341017	5.8067157268343
Merged-chr11-117326452-4	10.5536224073527	0	1.35657301262502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32435281-5	21.4736151984681	3.01331699988953	1.10754310227438	2.72072210436016	0.00651394961774931	0.148209964768585	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.9134233865196
Merged-chr14-57264163-3	6.64088785814316	0	1.38664854479969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177257396-5	12.2538923586174	0	1.34822717793514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75255552-4	9.52234856855295	2.48213078133299	1.16736449849369	2.12626885992835	0.0334808793627313	0.454469604877179	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.887876939341704
Merged-chr10-59235424-4	12.3816176610268	0	1.34610105682249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-58529454-4	9.26251415490281	0	1.34942096461102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14017936-4	10.5380418329643	0	1.43951167748635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4099018-6	33.6998548921546	1.35469528214505	0.42909803480103	3.15707640743032	0.00159359583205322	0.0519031011591259	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59006331420087	4.51698824564432
Merged-chr3-65518153-6	33.0002740857708	0.734554931225089	0.537407128709629	1.36684999506581	0.171672328416924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44181999537264	3.43581562238011
Merged-chr2-18903863-4	10.6620980832775	0	1.34817669990138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127299595-8	43.0091064225668	-0.411187150892309	0.336366205511146	-1.22243894944043	0.22154167762922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59172786526992	5.11901630539974
Merged-chr11-114542326-1	3.04374266594843	0	1.44900294974518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22367689-4	9.63590265303761	0	1.34351455168519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119663663-3	5.28645605971797	0	1.36186087176301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16194342-2	3.6550558692983	0	1.42594351791855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123039297-8	29.2097422051764	0.489728621774495	0.333751473606794	1.46734519695774	0.142282174529675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44599220533057	5.03621965415016
Merged-chr13-34107230-8	31.1524470626236	-0.935186710543053	0.343649457300814	-2.72133911657668	0.00650180247738691	0.148137151085022	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80965499538639	4.82811290394494
Merged-chr3-65929510-6	55.6960980357472	0.365974248677592	0.424436613784812	0.862258902251868	0.388545062907155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56224752241177	3.94763630157124
Merged-chr16-21310904-4	18.3036553482732	0	1.3372586742234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38901353-4	9.55544131850491	0	1.3490214859976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61384323-4	10.9116429370233	0.466952467694306	0.780982506188562	0.597903876199712	0.549904073346876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41651361393431	2.2456025400177
Merged-chr10-94090186-4	14.9691102385719	2.68815710828809	0.557731634715542	4.81980390023802	1.43699400625746e-06	0.000173200791987028	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	4.74293302888897
Merged-chr5-31887749-4	9.26064379288093	0	1.35342489329527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43556161-4	17.9073955923417	0	1.34816995892507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84465047-4	11.2959947905927	0	1.35553060475442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92487492-4	9.49529919605729	0	1.36384531607499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58723858-3	8.99531139587674	0	1.39059765438474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32394537-3	5.00060237454011	0	1.39215767334586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41335888-8	40.98206683078	-0.0737711817411984	0.291123583074956	-0.253401599973454	0.799957891398057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3095642517347	5.21348350532267
Merged-chr2-91361450-4	10.3520728635052	0	1.35779494432303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41674476-2	5.82590672155174	0	1.36749544348389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40301281-4	9.06870252106043	0	1.35133226219266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102311674-4	8.24530118126444	0	1.36247059243485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-118044446-3	6.520029211313	0	1.35965731621577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14641865-4	13.7325875458699	0	1.36949283576064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103003415-4	13.1611791540984	0	1.35452174859709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-1163242-4	8.48871404916026	0	1.36627240648917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104337852-4	14.6498099544278	-0.0336919892830546	1.29442688651689	-0.0260284992794879	0.979234607009842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr1-172004576-1	3.47192831339303	0	1.39859238352588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38475284-1	1.63999887304464	0	1.76398334910084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3164224-3	7.29840257384298	0	1.36776000592498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34857842-1	2.59667747239949	0	1.41263127026049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46583608-1	1.60551010018996	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116618553-1	2.81672705775324	0	1.42454590994592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113661224-4	13.3901008268523	0	1.34324653194413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101978655-3	6.9309367860791	0	1.38978672626573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77385750-2	3.71171677277426	0	1.39288174200445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17610295-1	2.39220188593444	0	1.41862023254297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142068787-1	2.02108432173368	0	1.48016370739926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-164964846-2	2.50996748102081	0	1.49797202545348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29920503-1	3.66661523801536	0	1.40419479384675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82924835-4	9.51530236150872	0	1.35618003093828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13469173-1	3.02989978058319	0	1.44280701792631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133813436-11	71.8409795537501	-0.11312345661626	0.285020064286154	-0.39689646727006	0.691443809420206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03486378253555	4.87382237184697
Merged-chr1-132312865-7	23.8177362153599	-0.0409512439404781	0.356169042351283	-0.114976988651609	0.908463361460495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15134624975913	5.11328022451527
Merged-chr4-141832433-7	39.6160998065795	1.15468954300896	0.296291027977202	3.89714650116846	9.73327446804643e-05	0.00574779800725541	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59851487755596	5.82364407003758
Merged-chr19-8829842-4	13.0570572104088	0	1.3452846346843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85523273-4	15.400842065877	0	1.34700080654207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76393176-3	8.03053004571044	0	1.36564625781316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14294708-9	45.5116698456527	0.297349591429501	0.2827324363518	1.05169960428422	0.292937392623206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93650752418451	5.24636285383802
Merged-chr7-64065053-3	4.17756837643255	0	1.42564693252782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91074825-4	31.2326176084053	0	1.35237014377173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84590476-4	7.3498421588836	0	1.35184098316427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36570082-4	18.6864281380832	0	1.36171974810479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108082464-4	19.1240764591192	0.466108275082533	0.468451863150023	0.994997163525551	0.31973764390387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29592793539725	3.64517529374414
Merged-chr15-68011391-9	35.5787691427541	0.0845263944175419	0.30550641917621	0.27667632858735	0.782028649625624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14540248949832	5.2117108999734
Merged-chr3-20132994-3	6.10755262661964	0	1.41670342493047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117301946-4	22.6162208626038	0	1.33742328247943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32940841-8	36.6775511923009	-0.442684981265595	0.371608229936913	-1.19126796879808	0.233548404255334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20229319819523	4.71512717935046
Merged-chr16-35739734-4	13.9936706487446	0	1.36334758876124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111033917-4	11.0823029253533	0	1.34783520732509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72983629-4	8.23825820035771	0	1.35614607469761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-89170269-4	9.90849726469099	0	1.35894876176932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44722233-4	13.3517521357511	0	1.35564475027354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88593433-4	8.10247931691475	0	1.36031236604354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88720045-4	13.1230205739972	0	1.34964485605779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63174611-2	4.12276545611601	0	1.41262562277903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56743725-4	10.6793234503043	0	1.35771844259993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73242275-4	11.3119929429558	0	1.37172091886618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50024696-4	7.09303553687641	0	1.39106973869382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111234609-4	9.83919594561456	0	1.35609235742341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69417609-6	35.3329368724247	0.0324782518038218	0.313397852937195	0.103632655742318	0.917460871647704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82895319613244	4.92100735175604
Merged-chr12-111744236-4	6.48429623402396	0	1.37048417080485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29623461-4	9.44048681853029	0	1.34921723641577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25471352-8	36.2789044591224	0.646505678673053	0.33414739901228	1.93479189299119	0.0530158383405688	0.614082240859786	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18976747445786	5.82440032765052
Merged-chr7-130646188-4	12.5314111846453	0	1.35168492339697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82918168-6	42.6558074968543	-1.65507431973334	0.342398174364256	-4.8337708657658	1.33970780586589e-06	0.000164762843029557	C57BL6J_F1_Control-BALBCJ_F1_Control	5.93951748909822	4.27599577510193
Merged-chr10-59381825-1	2.24495568408691	0	1.53905696388467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108532955-3	11.3754601336589	-0.625833369951786	0.655932108852548	-0.95411302710365	0.340026432628308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56757889007095	1.97135661134131
Merged-chr11-17992494-1	3.7000814969186	1.10670433221587	1.31219666727164	0.843398219046666	0.399005767638678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.859510663435501
Merged-chr9-61681191-4	12.9168582579652	0	1.34273184915383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66817208-4	11.1967393928385	0	1.35247403066662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180402714-5	16.399134696824	0	1.34166753461817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108050662-5	24.22555045644	1.29727896382126	0.643041022638312	2.01741244827383	0.0436524892753002	0.537829933027209	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	3.18353944197085
Merged-chrX-99018114-4	21.0255081122005	0	1.35390010585512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140767928-4	13.178074684404	0	1.34729074695072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101537742-6	18.0314837719009	0.817255411364747	0.577734529433622	1.41458640556925	0.157189796979395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99170652413272	3.16888659213919
Merged-chr9-106378184-4	18.5670987986218	2.29204051041249	1.20964186980164	1.89480917255977	0.0581176875603229	0.653136112898819	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.730937814817307
Merged-chr16-45736902-5	15.9503580824263	-0.141384215873104	0.641296810741826	-0.220466114137628	0.825508160134216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81960882153758	2.70089346712193
Merged-chr17-56031106-4	12.5777864641779	0	1.35800615015557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-37972827-4	10.7640175748341	0	1.35450324696511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108880216-2	2.75270462444627	0	1.50440872963047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34956455-4	6.81152183311786	0	1.40933448297152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140381334-2	5.62317846352649	0	1.37773107410212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130065658-3	6.46133769541847	0	1.37447519464912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97775930-4	10.9610341128343	0	1.34998629752163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155413588-4	9.22191083418146	0	1.34911306390376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12423593-2	2.93021274137049	0	1.46347220011176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164513526-2	7.64300479313243	-1.72516473701851	0.933090797702029	-1.84887123661188	0.0644764079223051	0.697209679381059	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30406722002565	1.06633037676026
Merged-chrX-167338158-2	3.75262779754082	0	1.41004825902044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43871076-2	2.39643342591045	0	1.71384030809036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9599517-4	10.547330799884	0	1.3502720107252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31864128-2	3.27664029325655	1.83577970453073	1.36914194891419	1.34082496412195	0.179977288971297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr18-37848986-3	8.51000130114081	0	1.35461346439006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40728906-2	6.2942402192142	0	1.3851254758044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-112002776-4	11.6607808775387	0	1.35386949725729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115487398-2	3.6496332913622	0	1.41048377129096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74988982-20	107.681502997384	-0.134683294680671	0.222194730689118	-0.606149814007573	0.544415274885405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.37892466306602	6.22077019236974
Merged-chr13-97869664-8	36.4657209688331	-0.223695966550499	0.341398498978671	-0.655234182984719	0.512316989073265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35581599698175	5.14281199965826
Merged-chr5-28123264-8	28.4063887507408	-0.476097399064206	0.376745478176455	-1.26371098431928	0.206333781110255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7143807668535	4.01088455803653
Merged-chr1-33768180-4	8.55233988148903	0	1.3540524379264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17879672-4	9.88125721951158	0	1.35451944215102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57211264-8	40.6991916720721	0.849120095103811	0.30176584830244	2.81383761575563	0.00489539502726586	0.1213999900945	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71753969994761	5.58761755222377
Merged-chr13-98810417-6	22.0828042263239	-0.301238214024813	0.434818337299378	-0.692790961613485	0.488440745155849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84027597956335	3.42400910364416
Merged-chr2-128445578-7	27.5116341786694	0.969141849234653	0.3760055063339	2.57746717244624	0.00995273347021714	0.200553469406622	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11879267282997	5.05516815446858
Merged-chr9-90253738-4	11.500893510426	0	1.35500927175408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148084413-4	10.3445090998279	0	1.35050104161588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5572486-4	8.79426017431226	0	1.35566706550001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122817786-2	4.19364563167393	0	1.48172377045842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-81059043-2	5.28366378715991	0	1.38832000618307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64618016-4	12.4085806444093	0	1.35330252932171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123586038-3	7.15170858705511	2.85575477375915	1.13659676211754	2.5125487498651	0.0119862543165568	0.227977886071977	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.33175291456033
Merged-chr10-41523999-4	9.40898050334212	0	1.36269965708971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26460265-9	99.6872072574669	-0.0762498203548112	0.214113145869458	-0.356119284713606	0.721751235607752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.39728450937168	6.31097367391291
Merged-chr17-57344577-4	11.272376181033	0	1.34644085703395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148436586-4	11.2974892678557	0.220783615555598	0.723539505928622	0.305143829392197	0.760256610977642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0900981927122	2.16696648475163
Merged-chr5-123257308-4	12.0162148275183	0	1.36813927086068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135909150-4	12.3260781061808	0	1.34792957647536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171825655-4	19.3322476989827	-1.45476753312691	0.439240432945478	-3.31200732904179	0.000926291192062024	0.0338388863637766	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05655880135211	3.76873030430425
Merged-chr3-27202119-2	8.74879733662233	0	1.3702439587807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105019918-4	10.8747549759249	0	1.35684522976524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80127404-8	44.5373529878791	-0.547260535254798	0.359640920113149	-1.5216859502045	0.128087789667447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36008158147637	4.882654694873
Merged-chr3-55660471-4	9.88553371621571	0	1.35923704233936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6517823-4	10.0700450005293	0	1.35838418657318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110529183-3	9.29095591013576	0	1.35338326729185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79089255-6	39.0245313128079	-0.168010558777201	0.449736173298273	-0.373575817895736	0.708719927923739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8153003928538	3.70645196800888
Merged-chr6-114894674-3	13.6945188400706	0	1.34056693651801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33673343-9	70.9932005003997	1.59689090651835	0.335253976288777	4.76322734243377	1.90520985783728e-06	0.000217574165256674	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31029416825445	7.06157313927126
Merged-chr9-123929017-6	21.0301727209579	0	1.34280761145863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87743025-8	54.0714895077039	-0.582880261137127	0.30243403576673	-1.92729716964365	0.0539426061338969	0.620979696491423	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02508720650935	4.37505570240356
Merged-chr6-54780757-4	10.789794938897	-0.013823554995225	1.27320028551583	-0.0108573294810599	0.99133727463184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.601513806634888
Merged-chr1-138550337-6	17.4950593015916	0	1.34298373594369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-42897573-4	10.8079651269107	0	1.34738621614717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17999839-4	7.91254256195635	0	1.36553619183863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82470788-4	6.92187427615522	0	1.35793460746207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89100596-8	33.8572984411299	-0.27168024444244	0.364482652411533	-0.745385939892934	0.456038441154396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92302974945259	4.81122388858622
Merged-chr6-31412686-4	6.93070643875913	0	1.35631349526917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93941885-4	10.5071594145856	0	1.35853051372603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-37684858-7	21.3057367138949	-0.96083321047887	0.441060173986515	-2.17846286549609	0.0293715939828052	0.418070300421918	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30890573809595	3.12842287835505
Merged-chr13-76579567-8	32.1397122522574	1.29629569074267	0.373932373549521	3.46665809765999	0.000526971728886189	0.0223207079828395	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77609340533748	5.10032325476431
Merged-chr1-20933650-6	38.4921481310021	-0.798457055106731	0.323453369669119	-2.46853837362561	0.0135666105279742	0.249060243731898	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52487102559963	4.76938878128398
Merged-chrX-163851080-3	7.87583866422854	0	1.36523113580986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35949988-7	27.9437703606417	1.1815170086818	0.502088592907111	2.35320424596938	0.0186124075239975	0.305112141313926	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40895879949083	3.95019065138291
Merged-chr8-25980877-2	8.07435560161556	1.08742645981402	0.978507434657995	1.11131139253336	0.266434337291628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.338064021838
Merged-chr2-27739673-2	8.51814452233071	0	1.3634305889108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135616259-4	9.84608174203585	0	1.34586120523842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8990974-8	25.8023858866259	-0.00721382823667065	0.442606845503822	-0.0162985012770399	0.986996253191069	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74896012449841	4.00376939983615
Merged-chr1-84363395-4	8.39360657342731	0	1.3632083385287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134115148-2	11.4781240771871	0.761155847996263	0.690005073793213	1.10311630581484	0.269976660621238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96073424694151	3.55168543180462
Merged-chr8-70560304-8	33.8442960029018	-0.621214236174449	0.312691679338152	-1.98666698611655	0.0469593126286515	0.565585335203497	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44424964204488	4.7850139177192
Merged-chr11-110244910-1	4.2020707188221	0	1.40291246463769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59240782-1	2.09530215381702	0	1.57827740728092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154785533-1	2.58953737987334	0	1.45216086403162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8994480-3	8.32206066098758	0	1.36305879239798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13847779-3	9.12442268987053	0	1.37691066430127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117990139-3	23.159003964065	0	1.35215839472772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25533347-1	3.01141630403072	0	1.4180934353056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4288008-4	11.7489456075135	0	1.35536638453215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105490838-1	1.67062742451144	0	1.59087343013905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78538847-3	8.08119796742267	0	1.35108185260314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116440211-2	4.45884644830615	0	1.37463755705941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45971314-4	8.24949775760462	0	1.36542888366088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136069898-1	2.43001589161467	0	1.53682217668444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126191229-2	2.82837620018288	0	1.45504202108147	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34783853-1	3.00498994516218	0	1.68602835110537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-195032406-4	10.7504575958152	0	1.36910868749596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-99763543-1	5.57468468135913	-2.69479461887205	0.858405332158123	-3.13930321483098	0.0016935011536831	0.0543750910886353	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77268057579707	1.13341594473881
Merged-chrX-75056331-2	3.49569166763003	0	1.5011571833146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127116757-1	2.53466190523802	0	1.44427774863791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20165544-1	4.14089875794824	-0.0942031987806398	1.08498405121936	-0.0868245009452165	0.930811012224666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26637849737819	1.67692428396529
Merged-chrX-93644153-1	3.06426923035228	0	1.42094004556967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35255695-2	8.6618918085504	-1.32430333418316	0.639875796427001	-2.06962560793506	0.038487418089561	0.495649741750876	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92680026881684	2.28284312426037
Merged-chr16-43580593-1	3.02487120135192	0	1.42596662433567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-66818678-1	5.11342557625167	1.38691413494748	0.832244451385718	1.66647447470298	0.0956189480834438	0.884723472147732	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08163998678444	4.42235384068205
Merged-chr14-77911632-4	8.53574943344435	0	1.36266301546638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53764895-1	2.69172884575827	0	1.44131608452719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114569017-3	8.79151657112996	0	1.35284317189281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86908046-4	7.09134555162232	0	1.35888127548643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95836201-4	11.5465798258184	0	1.35495141139788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-118179743-4	9.32909706430672	0	1.34528296247189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125756777-4	10.8536758119681	0	1.34693599315915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83080930-4	9.47968775071841	0	1.34567761006456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64376667-4	8.4671016846011	0	1.34885401078237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21077267-4	10.1130824764795	0	1.34359204026661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-42306553-2	9.66805123457314	0.479273068688763	0.527143785503938	0.909188502014851	0.363250632423326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27326069009061	3.82540132791128
Merged-chr5-96909484-4	9.55892158653845	0	1.35325300495587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82422248-4	10.5136903478391	0	1.35755178001724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135806792-3	7.54788299076068	0	1.3482047369176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134225745-4	12.1693122408369	0	1.36756746013189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118622257-8	45.544410069625	0.592824318761025	0.378466948742585	1.56638332813637	0.117258903600741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93578673005061	4.33123877923277
Merged-chr1-173737903-4	13.0894856913454	0.261527134889606	0.61254705893059	0.426950274393923	0.669415546365281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46681188023837	2.67768706846217
Merged-chr19-11244442-4	14.1454309385231	0	1.33959917397764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25099585-11	74.2255224397561	0.231641911491721	0.230308130988062	1.00579128708108	0.314515979413383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.68067459949951	6.9059564904908
Merged-chr8-94935346-2	4.7570071409972	0	1.40274547729014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42910621-4	18.3916042078359	0	1.36633339213216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106155366-4	9.84637192134147	0	1.35444328220106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21370358-12	73.4087975843268	-0.105107297513829	0.205878085750974	-0.51053174081366	0.609678983343604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.97937047056608	6.88195817560444
Merged-chr4-35068359-2	5.0082445297829	0	1.37936469168802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121597576-2	7.46339733375381	0	1.36252674073119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13435420-3	6.1394017396167	0	1.40768925952631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72170735-8	36.1130047033004	0.749600715231711	0.343653769118715	2.18126725964342	0.0291636545527453	0.416747396906594	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29939140222823	5.10590921537481
Merged-chr6-42344486-4	24.30578597432	0	1.34546628690407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85370850-4	14.3323634229299	0	1.35977345761597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119371520-4	10.0595027198682	0	1.35847751447875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45239089-4	14.2919463984205	0	1.34547849526594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30987110-2	5.28163260214822	0	1.36505596751895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117554824-4	15.3801366891876	1.01253924730806	0.665515575878016	1.52143583712855	0.128150501364971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26360001117397	3.17033931441393
Merged-chr10-62287876-4	20.7982507587019	0	1.34426717761292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86948966-3	10.4316084438729	-2.49252182059527	0.740111623493456	-3.36776472828536	0.000757802342246752	0.0289890059973196	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75916261249602	1.40373237117109
Merged-chr9-95350761-2	8.69673068501644	-1.03244007774151	0.874544066723635	-1.18054666085542	0.237782863665131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50521364448448	1.74294609266651
Merged-chr10-39267143-4	9.0465432663323	0	1.35461658907152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116018923-1	3.19089397724974	0	1.61389216537184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19031167-3	23.2990338761245	-0.514143808530682	0.772374060383667	-0.66566685094951	0.505624066195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43014059632518	2.13118170172995
Merged-chr12-104066481-3	6.55996061606996	0	1.38347850623428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-159198839-6	26.669111950258	0.241048566043944	0.450814905187865	0.53469520033614	0.592860640963332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47707312655603	3.92741859580568
Merged-chr11-29147647-4	8.04230200298037	0	1.356483326742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8577270-4	9.71125386609563	-2.01160092642973	0.962607994444614	-2.08974051539053	0.0366411154091198	0.480640538736569	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82605970561531	0.723581231604105
Merged-chr5-146288225-2	6.78027781810724	0	1.38317297642564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6624528-4	10.6355488625414	0	1.34618251285607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61134231-4	9.05497015147898	0	1.34840059986268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41483186-4	12.6502320639429	0	1.35719066536349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117307844-4	9.63710048569705	0	1.34517613311564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166717444-3	13.6758035432438	0	1.34275273485473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86862450-3	9.33369820217066	0.296739477950436	0.877933419703719	0.3379977015234	0.735364919875648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03169262342392	1.57419384977718
Merged-chr2-4573511-4	8.76327549782699	0	1.36243884737884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139974511-3	12.779635332559	0	1.35682942671128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-93520956-4	8.93592080572289	-0.0395616452512236	0.895108950750961	-0.0441975752985521	0.96474691479806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81967111503587	1.79276062464305
Merged-chr15-101379357-4	14.9024494025064	0	1.35140316081129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80034199-4	11.2101478092209	0	1.37788688975652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125273847-1	2.90849854247787	0	1.4306248853298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119832600-3	4.58406822996562	0	1.41194443055446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29496589-2	4.0149114366225	0	1.52330618676953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131174685-2	2.92768863340341	0	1.43200445475427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38729816-2	5.89157015708492	0	1.35668935970662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55217818-4	7.87096247066199	0	1.38505275093786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117320810-4	10.5873801928444	0	1.3584735016857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173769364-4	9.54487564658737	0	1.36832229365041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143050465-4	8.8408149495915	0	1.35655735195558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81102785-6	20.8139284857755	0.26039479788136	0.480574638740167	0.541840490301336	0.58792839530435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85875042671539	4.03857975697952
Merged-chr2-160622075-3	14.9310308719548	0	1.35465297041966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82569063-4	9.0596519446841	0	1.34668027935914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94462965-4	29.2647535482217	0	1.34341270629491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25075011-4	11.5520228391821	0	1.35699934016373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-110733508-4	7.80264064490807	0	1.34664078733046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31121816-4	7.71485819776228	0	1.34962739748617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73645287-2	6.40960264150072	0	1.35272568523498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63975491-3	8.10255681401912	0	1.3581845498623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125410683-2	11.5048364434456	0.5560087457324	0.844353590339583	0.658502257932939	0.510215446622381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.95685815637649	1.9387358207003
Merged-chr3-69657788-4	12.9547795128413	0	1.35373707239813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85408322-4	11.7499862461384	0	1.34908105819027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84037093-4	9.70923880832138	0	1.35792990503751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-11999232-4	11.720190088641	0	1.34406644332426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8881943-10	131.374080080497	-0.179514248526627	0.214428305781774	-0.837176080238775	0.402493600664054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.40321754582252	7.22418636888931
Merged-chr14-20824739-8	24.049872657074	0.0248621610940374	0.334720704996845	0.0742773324831272	0.940789713256988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69882786879907	4.6872563924962
Merged-chr1-156468631-9	30.9905611905326	0.686335439136843	0.366975016171657	1.87025113125359	0.0614489522975052	0.6771343194689	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91126558230745	4.81557248015179
Merged-chr13-19828300-4	10.7994108811574	1.5585357589109	0.813176349487101	1.9166024195046	0.0552884604074183	0.632321779778425	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	2.54594067060449
Merged-chr12-44181467-1	2.59489091484002	0	1.44713505269277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34007414-3	9.46084076851673	0	1.35089427799414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18626658-4	13.9290189261043	0	1.34636151727726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91380495-1	2.96404735758105	0	1.60729145864477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101712190-3	5.11209709930499	0	1.41200739269304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52872847-4	13.2047173861495	0	1.3586088263445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97251818-8	35.0015433563667	0.0520947945323131	0.285892532137961	0.182218101825668	0.855411567604892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28776437310509	5.33022119904999
Merged-chr1-43302988-4	14.6099711251193	0	1.34948996917938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27600866-4	9.67500855005964	0	1.36950143697006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17652295-4	14.5970007791782	0	1.36027933825508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146897162-4	9.68962056335907	0	1.35152455951093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104369915-8	40.619438748164	0.157363802254558	0.315104969736474	0.499401207115722	0.617496768975031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70870403032139	4.84665934329941
Merged-chr2-160083822-8	32.9039190732001	-0.0705853139706572	0.292755471776524	-0.241106728227231	0.809472398215914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.30976694897284	5.25300117138918
Merged-chr3-88464624-4	12.6564707991341	0	1.36496223994684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171053529-4	10.5553038747844	0.45344821799504	1.19895707334982	0.378202212634795	0.705280381887888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.67591700901439
Merged-chr8-75193247-4	9.94372828614424	1.38379440348251	0.778687047115743	1.77708671103248	0.0755539742712084	0.766953965902636	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	2.95314773288896
Merged-chr14-45634271-2	12.3308143922338	0.452893322380899	0.835179065152532	0.542270922820827	0.587631883505968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50954942419772	1.8969534089618
Merged-chr18-46962824-3	8.43596789667354	0	1.378259050811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127257202-4	10.783328661612	0	1.35634079949305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73984853-5	16.8505679708827	-2.5568659225481	0.876377107634555	-2.91754074846773	0.00352803547753804	0.0960852954152258	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54410203638168	0.723581231604105
Merged-chr13-111796670-5	42.6297307558261	-1.24242654603596	0.721846602174806	-1.72117807619061	0.0852185148722204	0.823581349590525	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20371525334702	2.69989883664724
Merged-chr7-97361707-2	4.65370561020221	0	1.39307433730525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70333764-3	12.2275229074862	0	1.40496320301018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138973692-4	5.69574325614218	0	1.37571609252404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6363377-3	8.28718196879248	0	1.35784775160253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8029049-3	6.68503817704074	0	1.39647414397395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106330319-7	34.6469914625377	0.104017326194101	0.367443397353363	0.283083944202895	0.777112489083988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25832345005649	5.6210638552447
Merged-chr1-154118088-4	18.2679287515321	0	1.34301399423071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4144084-4	11.419212126596	0	1.36707985725559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135478188-4	8.62591716179537	0	1.34567177047391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84243296-4	13.0440550491572	0	1.34442145995688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47788472-8	44.3818170650204	0.0620811162954548	0.32061083240857	0.193633870163007	0.846462575533707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67842794098465	4.73324413259399
Merged-chr12-69425034-6	31.3442970317673	-2.00914563091873	0.389493237622731	-5.15835818660559	2.49124690921778e-07	3.79332467053695e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37121561110795	3.46398433787822
Merged-chr6-83040792-8	41.5972526076722	0.145193665899676	0.284085254494777	0.511091876830746	0.609286723719258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66979606574012	5.90885593892959
Merged-chr3-115695577-12	51.9783046096966	-0.54779878499674	0.407275412266577	-1.3450327923017	0.178614645016427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06331699372031	4.3701429532692
Merged-chr6-134531486-4	8.18304608523504	0	1.35949996110682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88042640-8	36.5774465869013	0.231642548551553	0.319208160503133	0.72567865491421	0.468035790082751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52044856830705	4.67791868207202
Merged-chr13-81233056-4	9.07435194748505	0	1.36580344913431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108627595-4	8.0134624910226	0	1.35456193702549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124577099-4	7.92505958990415	0	1.43532230684081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165738085-4	9.08259617895255	0	1.34639684532669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51166322-4	11.9188417840162	-0.398654488493318	1.04282345041735	-0.382283778077461	0.702250885831757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.67591700901439
Merged-chr6-145302272-7	46.061732946341	-0.130804371909394	0.39751272502912	-0.32905706829841	0.742112553344522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.17710685376428	5.99126354444371
Merged-chr4-144996028-3	5.10300651360244	0	1.37378649134759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118012399-6	25.9260212537593	-0.04453338578487	0.589014487326987	-0.0756066051736137	0.939732081340166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23921600458732	2.37156688379672
Merged-chr1-88642977-4	9.17397914992548	0	1.36114608826701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87652458-4	10.6046011087012	0	1.38342489053521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106353972-4	13.9962724181228	1.94273143453088	1.04610107588641	1.85711637174708	0.0632945994518178	0.689444802552486	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.02497645810754
Merged-chr16-76232430-2	3.20466464697034	0	1.51103264119965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48101045-4	7.30391465286071	0	1.3462882479907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91954048-1	3.59447320805246	0	1.38313375394881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100211205-2	3.7077218025671	0	1.43073676363095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38528097-4	10.049154741102	0	1.35404940244944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9491222-4	12.2503561734823	0	1.35683489200349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83647236-1	1.418143859473	0	1.66029662449399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17254184-1	3.40138158006485	-0.533905870771362	1.03003364534787	-0.518338282620902	0.604222267227478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62745902464378	1.50549197367979
Merged-chr7-80202113-4	9.68864838860389	0	1.36718200501602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59600389-4	11.8871123519295	0	1.36207431581659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33619409-2	7.78958137231284	0.378752868453965	0.989794855653443	0.382657948049164	0.701973398071288	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	1.66683653681755
Merged-chr5-129729165-1	2.86456398976026	0.0352181680687749	1.25758434799793	0.0280046170460391	0.977658468722182	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	1.18984215491549
Merged-chr5-43745316-1	1.86023352368858	0	2.12602671183432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67043418-4	12.9944507565023	0	1.34599252667863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119419522-4	9.7477064107801	0	1.35497057568808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75307023-4	10.8284313931431	0	1.35131328049502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35505704-1	1.81253889856587	0	1.45076684940049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118162962-5	30.3930685395907	-2.1437829765877	0.440383645889255	-4.86798952821877	1.12739302579205e-06	0.000140882660894322	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27794108470527	2.87713295725999
Merged-chr12-9002229-4	8.10853058792489	0	1.36094091628394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95688630-4	9.39629318852686	0	1.35642689354079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64266788-4	8.0801418885196	0	1.35041810462646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-76268313-8	24.8204433049145	-0.391047609957639	0.439748665845974	-0.889252521563321	0.373867381707965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35429883104165	3.31830989978228
Merged-chr4-141651521-8	25.6312876328077	-0.115923688580545	0.384259053529434	-0.301681086016794	0.762895188070726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61436229650698	4.40980769370139
Merged-chr15-67992584-3	9.22091519740565	0	1.40656566435499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64382613-3	7.79239450006878	0	1.34850313515087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79017440-5	23.3866142723223	0	1.33934768866159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8984683-10	95.1459314260805	-0.0450880216738751	0.282721675049909	-0.159478475309386	0.873291915490201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.19933025405303	6.14423822708898
Merged-chr2-72390117-4	8.53802112011843	0	1.34749616694883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100150744-2	5.42887146458567	0	1.4280578256845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82446737-4	8.95091382075326	0	1.36005055752903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108246505-10	99.0364415404454	-0.750854027194989	0.221587819514576	-3.38851670114294	0.000702717492700453	0.0277005222521421	C57BL6J_F1_Control-BALBCJ_F1_Control	6.8106879182878	6.06034645911424
Merged-chr10-86972161-3	9.37663109033516	0	1.34512731329499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20372051-2	6.5139433847658	0	1.39228227345117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47399182-4	11.7407063693796	0	1.36140771249253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-59011912-4	14.4639178721413	0	1.36385836689807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60659067-7	26.5193058064219	0.180982742904373	0.454026271649875	0.398617336055696	0.690175185813767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84959010222576	5.25410176657264
Merged-chr3-52612310-4	7.89798338434552	0	1.3560603683402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37194159-5	13.1307952965386	0	1.34303124020067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172463541-4	11.2907908893087	-1.83555952542005	1.05792611294451	-1.73505455906666	0.0827311419342651	0.810488592934498	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9071925850333	0.600815099743027
Merged-chr11-20403666-2	4.74559879223101	0	1.41501004984331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35042085-2	14.3145168849736	0.0889740707505498	0.450632992068373	0.197442425025662	0.843481332620447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90238643930288	3.98488204148963
Merged-chr4-112288612-2	5.54182956116173	0	1.39866585283521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71543186-4	11.7726478469772	0	1.35314221367281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98677610-4	8.17106382020284	0	1.35896650253114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28754433-4	15.4687180056712	0	1.35114590566707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53435452-1	4.31961085327889	0	1.38604116306422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35918402-4	12.3424584609415	0	1.34845440668374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51307742-3	6.07030953153964	0	1.37687779988577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120742702-2	10.2045617940863	0	1.38663771880413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92977601-5	69.1205373851085	4.36169062944923	0.454705383914713	9.5923443701017	8.61058852179056e-22	3.60048447273856e-18	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18716481305495	7.06449496361455
Merged-chr8-41025798-8	31.7247167602736	1.6735283314501	0.378901591727409	4.416788865469	1.00177995195583e-05	0.000886901570168839	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48912730195289	6.10703502309975
Merged-chr17-13867110-4	17.0511255468469	0	1.34079481255438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84679075-4	12.8256021661114	0	1.36177538913845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105409296-4	7.75696165016042	-0.696873885225813	1.35882378260866	-0.512850815642892	0.608055680565911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr7-141092520-4	9.72630815391282	0	1.35541556414352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128760844-8	43.3218638737368	0.035164032345157	0.289357405584954	0.121524563278658	0.90327556020005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79644311228465	5.84437512405555
Merged-chr2-91537777-7	25.4901636971375	-0.475087679268846	0.411305658341574	-1.15507207263923	0.248060913520932	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0172491825535	3.44061177545974
Merged-chr2-25587999-3	7.58785243107601	0	1.38039182002268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59599100-6	31.8817161192366	0.597059593202402	0.439343215855406	1.3589821616795	0.174152241382474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93916387097019	3.78238783110888
Merged-chr4-95303498-7	30.5853478671303	0.814598239292694	0.404750363890222	2.01259421106693	0.0441573364775527	0.542819686472928	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83636178788826	4.65585533769275
Merged-chrUn_JH584304-3592-1	2.13198882674507	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-17090338-3	9.24982765744832	0	1.35674476494679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56311243-4	17.3994894677443	-0.554517622073537	0.634834787915845	-0.873483357605546	0.38239967347825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86347454477436	2.04909488009165
Merged-chr4-149303422-4	7.6807297413161	0	1.36383453592265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65137976-4	14.3924081352742	0	1.34251763769233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94239354-2	3.99519074259526	0	1.41742427478325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84622939-4	18.9851951799432	-1.33607128449756	0.738452079568918	-1.80928637275626	0.0704065249656645	0.73434914073332	C57BL6J_F1_Control-BALBCJ_F1_Control	2.825212231368	1.53201863853705
Merged-chr12-32305891-4	11.1833630659687	0	1.35963810069439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99186934-12	195.715572706017	0.0168974777921688	0.190314952254524	0.0887869165927141	0.929251255669865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.24821104296405	7.25922878043979
Merged-chr9-107247673-3	14.8242330580642	-2.36652404456207	0.5681233333936	-4.16551108792873	3.10655823563746e-05	0.00223372221072773	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25601903531158	2.97567138002921
Merged-chr4-101213753-4	10.6432978186049	0	1.34878401824274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72164501-4	13.048399977826	0	1.35964372760405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106972865-9	30.1922712813718	0.258800703666563	0.694978961296709	0.372386385889561	0.709605188742317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81579024618537	2.35740836713395
Merged-chr5-76705624-4	8.23897575803244	0	1.35374881469855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82513312-4	7.41305744938616	0	1.34754873681868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5034795-4	6.85392146843284	0	1.36014161397299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101201648-4	12.4033033462351	0	1.36784159585799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38467577-4	9.67909307481264	0	1.38399867834426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105271421-8	32.6043609115818	0.23471286736051	0.271129073274636	0.865686827774317	0.386661925458092	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39312402027632	5.60438361309258
Merged-chr10-117840708-4	10.937644193294	-0.0354742623996414	0.994919702251063	-0.0356554024604989	0.971557131601592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.02674429890598
Merged-chr9-22366751-1	3.73975628981507	0	1.42538012964777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113026854-1	3.88150661949561	0	1.38969758884023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141512301-4	20.4034832460432	5.27420611051943	0.916781664623862	5.75295767142478	8.76954489310434e-09	2.07262474280113e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	5.35039295744561
Merged-chr13-94295104-3	6.25044765310666	0	1.37722316037888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192759610-2	7.24685824783135	1.37705413158278	0.620463003759929	2.21939764859145	0.0264596834957323	0.391167238276995	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61093010937348	3.60878025486052
Merged-chr6-99388858-4	13.4847687971044	-0.0361020983010032	0.92146016346665	-0.0391792285031428	0.968747494172611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13132003301738	1.11816745933907
Merged-chr6-124894251-5	15.0228763281169	0	1.35129807278784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84985864-20	246.165321974989	-0.0318311376269322	0.166402913552013	-0.191289545041426	0.84829875169909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.61422447143393	7.56866868330511
Merged-chr8-79447507-4	10.5650299716326	0	1.36266579051483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66041494-4	20.6614384087105	0	1.3776997815085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70728894-6	18.4076490147116	-0.67204341359293	0.629451356979798	-1.06766536626038	0.285671486446763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88685225841994	2.10206186112574
Merged-chr6-54248530-4	8.27187925515125	0	1.36198487567577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55631324-8	29.1414380793968	-0.0619306366492457	0.332558158831598	-0.186224980517186	0.852268334975874	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4511989664432	5.36170323460643
Merged-chr18-58567982-4	15.8170614039111	-0.115756900764079	0.530247973122532	-0.218307106545657	0.827189837770266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22182750332539	3.13370926521562
Merged-chr14-70213279-4	9.98967543404206	0	1.3477814996287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56265244-4	11.9657066003046	0	1.34459683265944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-80081181-4	11.9907334476065	0	1.35588093299183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35705726-4	12.495795982321	0	1.34992462477844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63246736-2	6.7429602204328	0	1.38715525025006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-31273027-1	5.32915275847192	-3.03582337448497	1.04837872194737	-2.89573158147079	0.00378275805560568	0.100896440208375	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65785500005984	0.465515277017237
Merged-chr3-69157766-4	14.2411503465089	0	1.38097464556317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123145450-1	3.71896222906585	0	1.39923462042093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60702083-3	21.8910047789914	0	1.38239105268751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4055725-3	11.2569541516542	0	1.34514182484165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90744586-1	4.56935010819666	0	1.44937165599717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-73089719-9	94.8179342522208	0.0491815189524678	0.225691100916702	0.217915189179832	0.827495192277656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.398179908262	6.54246082186404
Merged-chr1-36126343-4	11.8806365594079	0	1.35796198835583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10858082-4	8.95835165569621	0	1.35243958988568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95694021-6	22.406771690571	1.17295373882561	0.582763445934877	2.01274418807092	0.0441415481331404	0.542785925653722	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6960750002622	3.6304166062361
Merged-chr15-90623701-4	12.4078719312795	-0.697971153504989	1.3483204278356	-0.517659703951389	0.604695717825513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr9-55272202-4	11.1262906801021	0	1.3556076393621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87585865-6	30.5923525255776	-0.572346660021354	0.548621756712554	-1.04324455422797	0.296835043222217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66828971316851	2.69669430345835
Merged-chr1-39408841-4	9.73227389907003	0	1.36793812400657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65538407-4	13.4958600477142	0	1.36483877518144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10831035-4	6.98834838546136	0	1.35720730434942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124671639-4	15.635193895916	0	1.36085228478028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13443724-4	12.170937966739	0	1.36642954638303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-74871479-4	10.2537969567255	-0.145772434976647	0.693934187805706	-0.210066656951425	0.833615648731517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04937768295532	2.42698818581862
Merged-chr3-84313226-4	7.49574919642432	0	1.35089661997383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93810173-4	14.1708291051126	0	1.34440995821088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35380094-4	7.31615960702044	0	1.34842579664993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14971240-4	17.8360867371627	0	1.34061381977319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41361308-5	24.3774723730473	-0.267165278144621	0.532392509966516	-0.501820129215236	0.615794052381819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00467572908896	2.2884760891886
Merged-chr14-66845693-8	46.980946299907	0.873724548961661	0.352846878468389	2.47621447794652	0.0132783784299338	0.245343090779324	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18583338965376	5.12269749771455
Merged-chrX-121331498-3	8.0475302594365	-1.67905158337945	0.947360823724242	-1.77234644005945	0.0763370667353119	0.771876229662355	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94701576741112	0.977057525713991
Merged-chr12-82246640-4	12.9396801266099	0	1.34625022079551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70714481-4	8.97886183919857	0	1.34825594922676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-22081571-1	7.46579290458304	1.25224626488892	1.33370908889426	0.938920095331373	0.347771770910687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.679405493272835
Merged-chr15-90618128-5	35.5153926433929	0.271415079066077	0.69915469203146	0.388204616459707	0.697864617114398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67333134268571	1.6874524407449
Merged-chr3-32398646-4	8.01217178639359	0	1.36251520556941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27075676-1	4.42905797393055	0	1.36836480877234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125474304-4	11.3998761525759	0	1.35142852867888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58497170-2	4.49578390746862	0	1.40166041891107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35420258-3	14.4961013007535	-1.07168400489766	0.928794010787215	-1.15384465495136	0.248563862842198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	1.02748994520012
Merged-chr3-146111134-8	64.5285149795762	-1.79333213112545	0.337431433765187	-5.31465640623572	1.06858764559304e-07	1.81522986958726e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01852263093708	4.09091721009914
Merged-chr7-80500307-4	9.26853606239373	0	1.34861036176836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148496149-8	29.9925690489946	-0.619133940424611	0.352400935011018	-1.75690209336491	0.0789344987793584	0.78889509452972	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92835900795467	4.33459271929818
Merged-chr13-9330815-3	5.8826096004691	0	1.37640796017286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5511637-3	7.68541521667543	0	1.3737279783307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46467094-4	12.7977436156258	-1.25162481039347	0.878851131375303	-1.42416020837889	0.154400100714516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	1.02674429890598
Merged-chr2-102974240-2	5.33235742996453	0	1.38402256310749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91139703-4	8.86355404670861	0	1.35190292589093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153764321-2	5.2464049719678	-1.8852799368316	1.28785068120823	-1.46389636961863	0.143222265480389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr2-11439496-4	11.2317212130499	0	1.34942630117914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69420390-4	11.3424321383258	0	1.34484848276071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88641177-4	12.5855925333384	0	1.35439635890792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100664449-4	12.4119455016342	0	1.34822868683955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75342273-4	8.14444916898033	0	1.36905511973489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149937985-4	9.47386732662714	0	1.34877150733142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125406681-4	8.96449531787846	0	1.35451153713167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36471035-4	10.7644784448338	0.614817409953844	0.855771528109985	0.718436393077601	0.472488254004976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	1.49792997957569
Merged-chr8-126584424-11	102.91256447318	-0.327730322168363	0.221232862375137	-1.48138173800166	0.138504878303386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.5713366248931	6.21103288175109
Merged-chr2-133497340-1	2.55303342613466	0	1.42233793821564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70943164-1	8.10255039138682	0	1.35035702960085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64689031-1	1.94006286140507	0	1.52881807825539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138016055-1	1.97525108691504	-1.22003959018674	1.52293125650675	-0.801112712720352	0.423066397203692	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr3-104523770-3	11.9342649799687	0	1.35843309118583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95872351-1	4.49584987141423	3.45786626311333	1.16428359590855	2.96995188737927	0.00297846393071155	0.0844745633788178	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.97483397408986
Merged-chr15-102451085-4	13.8631956708702	0	1.35044116578566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7253470-1	2.35704460659362	0	1.52331026354686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17722286-1	8.00386478593397	-1.0136731869376	0.756604145198674	-1.33976689576743	0.180321141308264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69100147567081	2.11667041872131
Merged-chr4-141870816-1	14.1329569855507	-0.583649527015661	0.590387221000807	-0.988587669675972	0.322864921428905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84178785492734	3.11944401449963
Merged-chr14-74919357-2	4.87867988430719	0	1.3885892366267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10531787-4	9.74791480187144	0	1.35377525306904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35217739-1	4.88000661497864	0.64741032725163	0.81326776181008	0.796060482971435	0.425996881403333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22772873920999	2.53839431252411
Merged-chr17-69085705-4	13.7946843374214	-0.0372664988093949	0.611998058503355	-0.0608931650870435	0.951444292816659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05338998445488	3.01905864107165
Merged-chr5-21136750-4	12.7445393746532	0	1.35768023274708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69403708-3	13.6532928721033	-1.42040229576347	0.555257725268791	-2.55809551335082	0.0105247180293322	0.208106309943404	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49931393972787	2.75823713761518
Merged-chrX-102079206-1	2.04020629504575	0	1.49674586022881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94509433-8	38.8735796845547	-0.236548043251309	0.289075435334454	-0.818291747887979	0.413190616991742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39554449856021	5.14378999362471
Merged-chr7-16052955-8	48.3934331862962	-0.134292873940208	0.334202206729547	-0.40183120050097	0.687808258448724	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99843938490996	4.89505026376209
Merged-chr7-7188376-11	40.3941673024872	-0.712294737190327	0.337457425489406	-2.11076919157225	0.0347921554280896	0.466633796426233	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80673272979004	4.98274227731162
Merged-chr12-70136523-5	18.5908860709069	-0.710284053941159	0.61320382754325	-1.1583164064498	0.246734938510785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70784326063277	2.16696648475163
Merged-chr6-72938095-6	28.1111258442122	-0.119457663471181	0.456372676498493	-0.261754635241787	0.793510615709662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52666774073895	3.1628744892104
Merged-chrX-85710568-4	9.05468621056496	0	1.35512992504599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41550149-5	25.0512420679465	0.88411985048575	0.682184193008851	1.29601339278508	0.194970870830902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56763655772049	2.54120332682558
Merged-chr3-107106213-4	16.176662650256	0	1.35147413954711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115977861-4	9.37347400946885	-0.0348078883570729	1.2817249213639	-0.0271570660575386	0.978334459387268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr4-42965603-8	57.3790621233074	0.753957733804314	0.292714896314352	2.57574091137003	0.0100025565474111	0.201157592068339	C57BL6J_F1_Control-BALBCJ_F1_Control	5.87222186688851	6.60885864620361
Merged-chr14-54442737-7	67.3752791184085	-0.153894396642507	0.41233136525398	-0.373229905873674	0.708977340014229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42107133733669	4.18338505485741
Merged-chr3-79491828-4	23.6165514024114	0	1.35073214478561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75737377-8	33.0303210478275	0.180321330728305	0.372544899825272	0.484025766593175	0.628367582801539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6803126746554	4.90287627979384
Merged-chr1-100180244-2	7.51968307144789	0	1.46799495662587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129508164-8	72.2826530811375	-0.411924400762139	0.395849881389307	-1.04060761447348	0.298057695809574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31782250520081	5.07950856061255
Merged-chr17-70707159-7	27.7972895000393	0.406144848509374	0.31425027015485	1.29242481894842	0.196210066265718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05172885703403	5.43314757884825
Merged-chr4-59575369-3	9.36764730820368	0	1.35751481027176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125305423-3	12.4665212490198	0	1.39626249850781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101675858-3	11.059129189422	0	1.34608397879001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138267811-5	14.1374607870559	0	1.34582239596974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139668583-7	34.0430128909722	0.52031539357679	0.346933383380986	1.49975591425113	0.133677640911731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22527816958312	5.73429455706435
Merged-chr2-69129014-4	12.0590763563214	0	1.36359936974216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80661938-6	13.2958609846083	0	1.35280283226414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35709803-3	13.199611915203	4.77733553443755	1.05162795365618	4.5428000633002	5.55118969566557e-06	0.000544687943441669	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.48537294520943
Merged-chr5-137850459-2	5.02490553168447	0	1.42135192670318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13690575-4	9.24827637673826	0	1.3627713937066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88300476-8	44.8047167513656	-0.43870930282521	0.270391156879358	-1.62249870849494	0.104696609419617	0.938406004886516	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36779784989786	4.93627903965627
Merged-chr7-75700975-5	12.4222739569743	0	1.34499510691088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59728202-8	105.670533701871	-0.237930234963904	0.330457418504067	-0.720002704254545	0.471523330543783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10226966636664	4.78109743581635
Merged-chr13-95844469-3	11.0963481795264	-1.31583831542126	1.31585982319153	-0.999983654968491	0.317318417965792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr11-117879011-4	9.66389894091805	0	1.35321201562398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37218829-12	84.78800119886	-0.365540498513902	0.217728109353994	-1.67888519125285	0.0931744211746997	0.870401849224179	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64797519425983	6.27293767471232
Merged-chr9-113725780-2	5.59097562948453	0	1.36031366396041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48581584-2	9.00853508902869	0.127813482166468	0.643403362244862	0.198652182544587	0.842534831227411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71230632646541	2.32937334132141
Merged-chr5-3492038-3	4.5574165114463	0	1.39592115127256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26128611-3	9.08263896300957	2.02489182069244	0.824555787219359	2.45573659427092	0.0140596169356276	0.255104751019051	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	2.5939669477442
Merged-chr7-125596570-8	41.8658652598974	0.697787351640571	0.326685174623014	2.13596271225286	0.0326824532345524	0.447841057569204	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17202303034908	4.75664006336167
Merged-chr13-112748282-6	31.7138011917602	-0.294389228376351	0.413283233787255	-0.71231834323067	0.476267667697294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96330918875812	3.71698609114479
Merged-chrUn_JH584304-2362-1	2.89992780722599	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53187381-3	5.61786651409505	0	1.39278908151869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93898723-3	15.1815785708588	-0.035363977916961	0.816800372468338	-0.0432957416634036	0.965465785701575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66127991928328	1.63990324542946
Merged-chr13-37121822-3	5.83404772169044	0	1.37352971794428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65497119-8	28.3440919059409	-0.757345063919952	0.317748326143465	-2.38347459799995	0.0171500680336808	0.291096378389147	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45967561416	4.66738631927499
Merged-chr10-9722786-4	14.4278188900146	0	1.37427673170555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128168146-4	13.2444309109586	0	1.34715062307034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5702544-4	9.08149443465416	0	1.35123852136448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53710782-8	31.6775565820131	0.659185385289743	0.364785365894621	1.80704997217506	0.0707544879194179	0.736103963408926	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38548076415151	5.08608223343189
Merged-chr18-64989667-4	9.62229430300393	0	1.37058911215422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23821874-4	15.634679898603	0	1.35007755857131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120948339-4	13.0103317204374	0	1.34305834288119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160060282-4	13.0913292934543	-0.569466263394019	0.647535921873198	-0.879435787510694	0.379165035099944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43491183200938	1.92460482503279
Merged-chr2-31172233-4	9.98795320733642	0	1.3681792760371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123949628-4	10.0286682691419	0	1.3461936226567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94372917-4	9.0839440574991	0	1.36562988995414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129713773-8	33.9994382707121	0.679131536743278	0.320371825640285	2.11982291322275	0.034020982218834	0.459579168099801	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05164866455279	5.73167524088574
Merged-chr5-52424245-6	22.9782575168478	0.835689935990277	1.11809464563112	0.747423251918503	0.454808114182515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.815004392037195
Merged-chr10-68239354-22	122.384261347953	0.164912332946742	0.209181403229964	0.788369952588208	0.430480341115875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.86025394919382	7.0161767574507
Merged-chr3-126612974-6	20.5632361911805	1.30787026308214	0.817515101537109	1.59981174735862	0.109640351969214	0.963923644297997	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.1304360554358
Merged-chr8-126571216-4	13.5418882968763	0	1.3469646102798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52424802-4	8.14729872874284	0	1.3685220626095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94691899-6	54.2893703855114	-1.4588087035392	0.393634086166461	-3.7060019820598	0.000210556651261704	0.0108798944923336	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51932331495018	3.31166238291653
Merged-chr14-20885694-4	8.43099719333233	0	1.3587235077154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144203070-4	10.7857531287002	0	1.38121016229651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136450025-8	33.0893999575669	-0.335426654434857	0.322975968310773	-1.0385498840338	0.299014123893898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73659617403181	5.41550662464299
Merged-chr8-84974401-8	22.5637216801237	0.600019940591281	0.368325375664032	1.62904860820284	0.103302729276342	0.930403600283911	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9352559887578	4.82936146834892
Merged-chr6-101556470-4	10.1329824034828	0	1.36322721967573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166301428-2	6.92485368200935	0	1.36412035080333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117727713-2	3.38949751345992	-0.672206495001297	1.15339079807411	-0.5828089630364	0.56002191050616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	0.841757702988201
Merged-chr13-81238139-4	9.21497081010505	0	1.35859253703815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31401108-4	12.2687420801673	0	1.34874552786982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96457567-2	2.71547240870904	0	1.54778348882163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79210210-1	4.74519825450648	0	1.39377479224896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110887688-2	5.11648304669534	0	1.38913349421528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122830624-2	4.43701156595708	0	1.41571369976047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143472180-4	9.65348043147706	0	1.35042319783417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39833868-2	3.41444705735838	0	1.48510224349305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99052548-8	41.941037037636	-0.240932527330261	0.301733251356576	-0.798495115294857	0.424583226668468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12743011313747	4.89416212892308
Merged-chr3-81058651-6	18.176607050217	1.98230937682049	0.803732315999187	2.46638008371744	0.0136486420501618	0.250228173087604	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31345086927531	2.91853046514923
Merged-chr13-47231312-7	42.9048128524018	-1.29187662761458	0.231121730826036	-5.58959394686676	2.27601202864158e-08	4.79541619631504e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	6.81873491755144	5.50274846282598
Merged-chr3-41618583-4	11.7061920183788	0	1.35923317629215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67186454-8	56.5290066933323	-1.29325107370974	0.30413786863794	-4.25218694239383	2.11693028536417e-05	0.0016509930183947	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29481269356547	4.64631686332827
Merged-chr8-86881398-7	35.3687838973671	-0.6536616329481	0.455426730212309	-1.43527287615151	0.151209353830228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91344923213719	3.6120303898178
Merged-chr9-45314125-7	37.3975029220573	1.76383577795404	0.358954454526905	4.91381498602308	8.93210442657768e-07	0.000116157958020176	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53698851098525	5.24322525451065
Merged-chr9-75547206-10	32.0758033509397	0.00491548343240303	0.627652627631058	0.00783153485862951	0.99375140312311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38233238432098	2.44336068651373
Merged-chr8-120768778-3	7.32413940524619	0	1.34959741055593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4112010-4	27.564904806536	-0.476832352041269	0.746573483188927	-0.638694465820724	0.523021713622727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69949452834228	1.83076147239238
Merged-chr4-128981305-4	9.2880228071298	0	1.37886383110558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92923730-6	27.9138101033091	0.513188871122216	0.479946040063846	1.06926368442158	0.284950869549005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3667164112835	3.95275288210395
Merged-chr15-10869262-5	16.9900452413446	0	1.33961014936547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9945991-4	12.3329818785751	0.229656398680918	0.695385694474112	0.330257582958471	0.741205340360672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97634481356229	2.1512909918148
Merged-chr11-59518396-4	8.44196176361427	0	1.35602492987531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67636435-5	23.0323242315223	-1.31557583787934	0.95584494392114	-1.3763485869188	0.168713737201107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0.577068348605183
Merged-chr18-12947903-4	10.8020459529309	0	1.34702469695559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14869414-1	3.2981698835543	-2.10952751815652	1.33974838120443	-1.57456993249737	0.115355747672556	0.992187197426028	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0
Merged-chr9-56100193-4	9.17503226671342	0	1.34558678891014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-55230626-1	3.30244117616389	0.621433388772458	1.39820367368542	0.444451263051304	0.656716357757228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr9-61056487-4	10.0980693156967	0	1.34452449948234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99647100-3	9.94785167230857	0	1.36322241598102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46432425-3	7.6077946395555	0	1.38290938856535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119917292-3	4.76772271960471	0	1.38662392959804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70326803-6	26.9436287232842	-0.268478179541858	0.443338041970659	-0.605583446772265	0.544791397106031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48407301699138	3.3756979614154
Merged-chr4-102625074-8	71.1785445147263	-0.33318579788357	0.407116054594727	-0.818404958790552	0.4131259911662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32001522156284	3.93490894364453
Merged-chr2-122418564-8	46.0206344730073	-1.0081638343685	0.311410948653414	-3.23740651614191	0.00120621452068706	0.0416573158386455	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50629399957153	4.54650170637018
Merged-chr4-139209037-8	41.7249202953647	-0.886139835646785	0.343233276334695	-2.58174220492155	0.00983029853398467	0.199018695720251	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54709619623091	4.7633768820102
Merged-chr12-102690393-4	9.18826638157756	0	1.34933129098786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44607456-4	8.71229852253689	0	1.35579621745567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153407994-4	7.63987051668525	0	1.3735244671603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80680250-4	13.3992950209165	0	1.36469359098375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113650299-4	14.5182931790719	0	1.33932390932573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21652845-4	11.568591863385	0	1.34289340802085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55623600-9	78.9927519981274	-0.543405912785594	0.231436038765549	-2.34797448005096	0.0188758145402442	0.308592602283649	C57BL6J_F1_Control-BALBCJ_F1_Control	6.23548276750244	5.62881073200434
Merged-chr5-30516551-3	9.81566389618127	0	1.34584238497144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34126060-3	8.61761133619894	0	1.38658855078978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32055322-8	45.0701687509457	-0.133216048150131	0.320805532668986	-0.415254833798601	0.677955361420888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06408207155106	5.76017230577817
Merged-chr2-128387509-4	12.123334691288	0	1.34953292124811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94724963-4	14.1832714966619	0	1.34867162910223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118098447-4	12.3255277089377	0	1.35012740597664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69699496-4	10.3906286615366	0	1.38041746481689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83999489-2	5.65996510870687	0	1.37701577046775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147564380-7	25.765890296547	0.126673595336926	0.357489627365063	0.354342016216232	0.723082583335735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9209350508171	5.18757447496062
Merged-chr11-110420725-4	8.57861467553617	0	1.36042846392077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36695757-4	8.94442417058837	0	1.35047798651204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62810561-2	4.4352535621572	0	1.3767517169482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113398406-8	58.048054863616	0.0481944512176402	0.321350887854448	0.149974538858188	0.880784703086244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36979581615267	4.28530494235182
Merged-chr18-83423220-4	8.99310451075482	0	1.35585130417288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111446462-3	6.56484185643278	0	1.40026775182854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171887329-8	30.4568701560883	-0.67692244049324	0.381971589221397	-1.77218007724885	0.076364669643333	0.772011730917228	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26236173465599	4.40013661430404
Merged-chr10-120848002-2	4.18854711891729	0	1.38426370043634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125252911-4	6.93932730115768	0	1.34897523430041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142076155-4	10.6889271648334	0	1.36270814696826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117352929-4	11.0928663458264	0	1.36112355894292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167005076-4	10.2794082349326	0	1.36054666920333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39527973-4	11.0239012670939	0	1.35241874321843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77686060-1	3.11952612513392	0.199786907536417	1.06075865436389	0.18834341507798	0.850607453978736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.71450075940727
Merged-chr16-11442705-1	3.14857597690905	0	1.4382935049075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9974551-1	5.02308600960775	1.27262027544896	0.899111866131847	1.41541928583816	0.15694559832615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	2.64651151072372
Merged-chr13-51115983-4	13.0089384571732	0	1.34494918926955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128171304-4	11.0269228137268	0	1.35483951505075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169993769-3	7.31907405703931	1.76453815161457	1.15158898321243	1.532263834873	0.125457341693278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.38950137562363
Merged-chr7-19335827-4	12.7070517845257	0	1.35263613806839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62079569-4	11.6149464637441	0	1.36403648462819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16329261-1	1.82933411210527	0	1.48505749562134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83525611-1	1.82533938978368	0	2.37796279186494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81670303-4	8.34518639680009	0	1.3518753124861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7896258-1	2.50617956762384	0	1.68064324626703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110464181-4	14.2140339345992	0	1.34237897496024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147072098-6	48.6418890576126	-2.41196315572207	0.347249417495473	-6.94590986823906	3.76028799274385e-12	1.91033172894919e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18449085456396	3.84162390213401
Merged-chr19-28329930-1	1.66955761439984	0	1.75415050870974	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80935367-3	6.87124734174195	0	1.37756661292521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7330590-1	2.05167078914398	0	1.51681519622812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32489568-4	9.45181920411834	0	1.35789284793478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148708196-4	16.2399308305056	0	1.33952660217619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68062138-4	18.377303120483	0	1.34582639617155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105582512-5	30.5805582501225	0	1.33403116052878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12225904-10	96.6924133777699	0.010025622627182	0.223507251050968	0.0448559166650739	0.964222154856062	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79250508739479	5.81074274827006
Merged-chr16-45024109-4	8.16822640492351	0	1.3477838997453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146159570-4	8.08596867276899	0	1.35045196730859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102718512-2	9.12425990648197	-0.708407278815548	0.682602009712681	-1.03780426769287	0.299361189562367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1558945316968	2.38790687071332
Merged-chr11-87471625-2	5.9716971675555	0	1.40249813791062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142249717-2	6.51781814117756	1.69212271063836	1.31423363823115	1.28753568727385	0.197907639119967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr5-65357152-4	7.76378553450364	0	1.36821596100953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-56689907-4	8.72435942105938	0	1.3613378166724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87470940-4	18.0139029319115	0	1.35207677759935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56530427-1	3.31927244573848	0	1.42479422773987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86128471-8	52.9322733641378	-0.75987278640189	0.302866320387802	-2.50893788860022	0.0121094774890204	0.229618605908138	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83371358271079	5.02502073595141
Merged-chr3-109011081-6	27.0413571978964	0.218799642093331	0.45254550718437	0.483486497202569	0.628750344991959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11770517651893	3.82136961961141
Merged-chr13-51312161-2	5.284001673088	0	1.38469181372882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3505763-4	7.03435409509146	0	1.34480531976273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11118674-4	9.51478706064354	0	1.38250996939413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74577253-5	15.8964646792324	-2.25067893760009	1.12440756174378	-2.00165759656546	0.0453215698632175	0.552260752341322	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81518459389541	0.303163067301871
Merged-chr1-171849629-8	80.1597391358764	0.989312898608196	0.282760603985371	3.49876497879945	0.000467418386291752	0.0204576457813473	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78489155445855	5.82141900339164
Merged-chr12-113031606-4	8.94157317717737	0	1.35483145627475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107713612-4	10.9419993674596	2.25605983184106	1.02399786688954	2.2031880190278	0.027581499401524	0.400775922471918	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.08188782053321
Merged-chr11-69261457-4	8.46228854062533	0	1.36408691363757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83413247-11	46.8034482623413	0.712943474291161	0.295999338603954	2.40859820043408	0.0160139174652267	0.278204071426096	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62675285203522	5.33409446072444
Merged-chr12-69361534-7	70.4886339268633	0.184019116466505	0.3935007848372	0.467646123101479	0.640037675502155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80516922235278	5.0436427381603
Merged-chr8-86861736-4	8.48572169009985	0	1.34776907469707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157445586-3	10.8686315822255	0	1.34681948213343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66686856-1	4.2519283121918	0	1.37455058661267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134435619-3	7.71196902557884	0	1.36461348761543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57803323-4	11.6530118594052	0	1.35959549685291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37093159-4	19.8956572133467	-1.24979997429599	0.450948649812735	-2.77149066709699	0.00558002718986875	0.134036543532512	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61366933981913	3.18324372176776
Merged-chr4-155539332-3	6.19518513969731	0	1.41281893126418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29484764-4	9.61461731531865	0	1.35109307348645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97061687-2	5.66969220319839	0	1.37252333593437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64927628-4	10.1240269619295	0	1.35767875679576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131671317-7	47.4068882267281	1.33463269463363	0.277891395309112	4.80271327994539	1.56529947826457e-06	0.000186047918316862	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99355693975276	6.28681421601873
Merged-chr5-100656569-13	176.898048520238	0.261100143188127	0.174073645235862	1.49994068794473	0.13362976713076	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.48909397515756	7.7576954173723
Merged-chr15-31342750-4	18.0971290114538	0	1.36190915665855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-144126198-4	14.5567287062354	0	1.34852455273913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66114524-8	35.523996243694	-0.552552234292838	0.304557751459427	-1.81427736330805	0.0696350348003745	0.729764961772423	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10677679118744	4.57268922065712
Merged-chr10-54052623-4	13.0122228054768	0	1.37267459739176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7057751-5	15.5483594383231	-1.19052539519318	0.624310296363674	-1.90694499534518	0.0565277106735147	0.641903034155334	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48205125280109	2.13795322910058
Merged-chr11-46461562-7	40.088937800482	-0.651549678576444	0.348291804061766	-1.87070057629291	0.0613865949015937	0.676721539698992	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65315674800065	4.02389478459277
Merged-chr19-21713616-7	31.5053299106487	0	1.33863474007481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35132962-8	34.1924277288878	-0.402140912025168	0.304176517382414	-1.32206429176646	0.186146743108506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80421708032041	5.43472645292167
Merged-chr13-48548528-4	10.0325008226836	0	1.34369840415317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44434839-4	14.1896643126388	0	1.36272500372876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84390488-2	4.4409796026516	0	1.38029467236944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62955125-4	12.8170950243734	0	1.33851038905606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95520910-4	5.60308715841921	0	1.36151304573341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63823349-4	10.7828375515617	0	1.39024143956397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16326416-8	36.789327265664	-0.106441699414405	0.379929162317879	-0.28016196167997	0.779353248667386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32896616240674	5.17413356737767
Merged-chr18-10229741-4	8.37434278675027	0	1.35301618629735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88383648-4	8.96073769662397	0	1.34416943973197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-4443104-4	8.0974509028211	0	1.34909168421696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46818793-2	2.95342921051542	0	1.46078866579679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22659184-2	4.12735015411207	0	1.45637817622158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6679217-2	3.92143547712569	0	1.40016103356492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28698314-4	10.627909654637	0	1.36091673840509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97442832-4	9.77200595137043	0	1.34237388743004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53566858-4	16.0575000674854	0	1.35901482931156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-94680873-4	11.3392774962448	0	1.35831242851244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53409396-4	10.7232410249992	0	1.36332601049933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69633628-4	9.40628379214706	0	1.36117004269403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-53098333-1	4.50127407778935	0	1.41521636204371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31085284-4	13.3690317023722	0.175516960100229	0.810368776335545	0.216588996547855	0.828528661682025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.8538004573626
Merged-chr11-58224512-8	32.4608749240121	0.557413451710037	0.335230734568915	1.66277549827534	0.096357382951633	0.889160492755169	C57BL6J_F1_Control-BALBCJ_F1_Control	4.109978146532	4.70307941698904
Merged-chr18-60787209-8	23.2528759133599	-0.353230390709916	0.392009536790599	-0.901076013613929	0.367547905279162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60569654889876	4.003311503105
Merged-chr5-18010537-4	8.27493190302704	0	1.36824483192249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184083321-3	5.97105176127129	0	1.41049201736944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102387426-3	6.86151854803428	0	1.36520249861509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28510615-4	9.03580689461259	0	1.36736944854206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34250475-20	191.547550594114	-0.808284155530171	0.241519748622936	-3.34665864857318	0.000817918612818366	0.0307987539838327	C57BL6J_F1_Control-BALBCJ_F1_Control	8.34225044466749	7.51024258359318
Merged-chr8-57531156-4	11.9696015433888	0	1.34143581459749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31248006-4	7.75924326310364	0	1.35118361365824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134262590-2	19.9099161401224	-0.415024206485973	0.516116446018101	-0.80412900942788	0.421322472391476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39726049287154	2.95169779803989
Merged-chr5-64677208-5	17.1477062025395	-0.0353526261740523	0.776184168858484	-0.04554669831265	0.963671553625628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.338064021838
Merged-chr6-124874488-2	6.95335713258039	0	1.36862755288276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63150127-4	16.1757964130654	-2.21044561447761	0.644796375242146	-3.42812971559821	0.000607754991656194	0.0247918012687482	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75587926599791	1.646227335807
Merged-chr9-66277122-7	13.2102848475944	0	1.35099692775881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36547453-8	40.760912401954	0.381898662576745	0.297972373270067	1.28165795501656	0.199962660195923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41768023783142	5.72576438579822
Merged-chr19-5806128-4	9.14548577057478	0	1.36741410682444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83646583-4	8.882921462114	0	1.36202092440398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56712125-6	21.6277176031168	-0.1909596388682	0.711708529524411	-0.268311578330818	0.788459494654519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69451313952006	1.34883400838639
Merged-chr19-40647705-9	42.8025244428717	-0.244711863759203	0.227382185113861	-1.07621388032956	0.28183161342819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80032296002736	5.58925329186517
Merged-chr7-38267822-5	29.9924782827993	-2.56261739928616	0.409117132627584	-6.26377434459311	3.7576914308841e-10	1.14755251961477e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5862322629064	3.13370926521562
Merged-chr6-17668038-2	8.54900310317802	0	1.38474360153993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161517499-4	14.9351331725129	0	1.34144316720787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92868692-4	10.9967222851834	0	1.34881548820773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112648262-3	5.88732165327474	0	1.38574386539892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99189260-8	52.8665072527468	0.0584201234288504	0.373321475029639	0.156487444029874	0.875648815531106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5879387722456	4.37684314989859
Merged-chr2-59243707-6	23.5410919328123	0	1.35143531436292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16357901-3	6.67238679612262	0	1.37660997362347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27825137-8	31.7541810013969	0.494200490241811	0.315882801913464	1.56450584599157	0.117698821165406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30415975442579	4.84411615719236
Merged-chr6-112778414-4	11.9513736399941	0	1.36473596305802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22116281-4	10.3189699112679	0	1.36236398333606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150672951-4	14.9303387314502	0	1.35559572915588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29391456-4	7.0876493741724	0	1.35998125519575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51417947-2	5.69451008809076	0	1.3799960036108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12371394-4	14.5168159460863	0	1.37755910548761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42077202-2	6.4951616246098	0	1.39240769552375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75636732-4	8.59531012438118	0	1.35961043767053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5784161-4	10.1446682564477	0	1.34641911660908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80775051-4	15.9180672474846	1.03043536657886	0.629723264534647	1.63633047183088	0.101770441981896	0.921408969968997	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	3.1474390159324
Merged-chr19-8982880-4	14.2346222653981	0	1.36916452134177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64639784-8	55.6495719536828	0.597459911129157	0.296693893170759	2.01372500372057	0.0440384133691045	0.541847920400894	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58566491241737	5.12925531939078
Merged-chr13-17836925-2	5.99574242880208	0	1.39038159115228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128779043-4	13.0230062687991	0	1.35675422133504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17163651-4	7.41242210301711	0	1.35942013679812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50772765-7	39.5372735453143	1.50634466813198	0.396384473202405	3.80021108284631	0.000144572887292119	0.00794624628949678	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19688204864944	4.94497269327223
Merged-chr6-54058962-4	10.6622170615088	0	1.34796873134428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61571038-5	14.2326676977178	0	1.35543574955735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125326064-1	6.73739694672774	-1.71820178472607	0.844133214091688	-2.03546283458934	0.0418043244726834	0.523001443961011	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93788918905273	0.730937814817307
Merged-chr3-83875283-4	12.347441858546	0	1.35761946930434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119353638-3	9.27957869399065	0	1.35461884818714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148573383-4	7.16241474259723	0	1.37322304551405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151312695-3	7.34709232958413	0	1.36646341087063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54140192-2	14.0063353838522	0	1.39448396277339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166688235-2	4.49521747330293	0	1.38536910098584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130954651-6	26.4010964981698	-0.0713953269821792	0.542664643923989	-0.131564360754963	0.895328876423121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36503174736749	2.38410582617704
Merged-chr18-33720405-4	20.5453995067185	3.26636231751988	0.579003249865853	5.64135403087402	1.68718041146496e-08	3.65392191182564e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04585323093051	5.48653014301456
Merged-chr2-45200798-3	6.44254934151526	0	1.38877191578527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-171329063-2	6.98767944411696	0	1.39082531280987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62430616-2	6.61283281372713	0	1.36508720632259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26455052-4	8.47100051654129	0	1.36204748882949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88698498-4	7.1417535930636	0	1.35947687233009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89411495-4	13.6345805324715	0	1.34417994357218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117373654-4	21.6713926732927	0	1.34733603841263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146848106-4	23.1123366170661	-1.00520267126288	0.443131503976889	-2.26840714831077	0.0233044024895173	0.35775318128429	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73195002188249	3.72178249215872
Merged-chr19-11343312-4	12.1571140446784	0	1.36276597733214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97993080-4	7.90858552596759	0	1.36014945476231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83830142-4	10.4078261754786	0	1.35756137771996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19669628-4	7.18437647661208	0	1.35782005647803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129512339-6	46.9825956877724	-0.7999388343364	0.335651234361641	-2.38324413094373	0.017160809543483	0.291096378389147	C57BL6J_F1_Control-BALBCJ_F1_Control	6.98271462518108	6.16789671303882
Merged-chr1-131360919-8	37.9081472494507	-0.015844767578344	0.289301110953994	-0.0547691210935713	0.956322401261269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21011548086415	5.20054381667897
Merged-chr18-75924984-6	47.1370341183602	1.57588464719068	0.379288837112026	4.15484056738856	3.25514437678113e-05	0.00232518256474961	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62541520189268	5.18314944403027
Merged-chr5-127608733-3	6.07472296537069	0	1.36338710764648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107772943-2	2.58044657632868	0	1.43687818365363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22423649-1	5.3924524197265	0	1.39099701879131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24817250-2	4.74685126460265	0	1.383848001579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184665520-1	2.5503772287377	0	1.40903747493986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116986218-4	9.27532729332494	0	1.35024288073053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80178149-1	1.04864837604207	0	2.0456736923882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115654254-4	14.0861149853376	0	1.34854728283964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65714106-1	2.04276294899009	0	1.48103360363882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113787957-1	1.94986137707463	0	1.49141690476759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11060881-2	3.50911823236203	0	1.47105024773825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14640489-1	3.00336348717915	0.609183510352281	1.51746208813435	0.401448915999768	0.688089641348093	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr8-126567847-1	4.46924051318063	0.422314753256887	0.922144285234354	0.457970363227442	0.646973733649487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.9134233865196
Merged-chr1-153952153-1	2.13165604956933	0	1.46921872273877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99212033-1	3.91409202889211	0	1.45677370928413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85507051-1	2.69035150826545	-0.0353390000865155	1.4133479202525	-0.0250037514331234	0.980051971334326	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.600815099743027
Merged-chr16-16086918-3	9.80978258033409	0	1.35440937600945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98496464-1	1.67337815462281	0	1.76186897097789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75638935-8	32.8415611659371	-0.894958617712045	0.299188244859474	-2.99128937412765	0.00277802105896871	0.0799106262543844	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46517082293587	4.58687470473432
Merged-chr17-10765021-4	13.8222812642372	0	1.36198242256891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128648730-6	24.9021445850234	-0.179830539101796	0.398432670630658	-0.451344862902815	0.65174101556548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4103094956579	5.23041342387344
Merged-chr4-33285643-6	23.4796260263001	-0.589079526442717	0.388567224135455	-1.51602989097548	0.129511794345873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66855396114154	4.12861370034483
Merged-chr10-67047848-4	12.9550730763892	0	1.35440320645117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107378365-2	8.33483035097569	0	1.3626677882008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93803407-5	40.6602565397363	2.57789286108013	0.466821019763931	5.52222961678923	3.34724655607458e-08	6.61647183787848e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63003640177516	5.53626813063385
Merged-chr4-43287527-7	41.5964111401463	0.672154052307382	0.322188815105082	2.08621162745255	0.0369594574553336	0.4831840182334	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83445946785696	6.52012238391086
Merged-chr13-94868809-4	8.97220893328326	0	1.34975179278363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8645478-4	14.141675265454	0	1.34916783231364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123940832-3	7.61375163782684	0	1.35156838446405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34248965-3	10.3340566547138	0.139549512403169	0.668259284435024	0.20882540004087	0.834584542086744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2093650116602	2.65013310996875
Merged-chr2-73553588-4	7.6571689091064	0	1.36125419700401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102063276-3	11.8298478682957	0	1.36043938296824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116922846-4	19.108791125823	0	1.36066352879242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94405453-2	6.49265259992684	0	1.37686809964504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56055262-4	12.0540117362873	0	1.352946998819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4770494-5	16.1691426956988	1.72647535365457	1.03986212431337	1.66029256503074	0.0968556107159969	0.892671099171053	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.75132748634479
Merged-chr2-126073892-3	7.87979173544395	0	1.42664614878384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81756879-5	19.7324927550808	1.24591686827268	0.619644822210614	2.01069519765824	0.0443576616019358	0.54442043960705	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14251121140159	3.44137359071312
Merged-chr10-8858672-12	61.4098588688858	-0.327212528539278	0.233849875523125	-1.39924183328	0.161740475743649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18908328713407	5.82741144140851
Merged-chr8-36190409-4	19.1429939327693	-0.50763127170242	0.742123491664244	-0.684025337298021	0.493959166422764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10663323369202	1.85449916425446
Merged-chr11-26602385-4	7.76846336236636	-0.697520130660331	1.35253026075302	-0.515714990562936	0.60605348318799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr8-84220354-6	44.1911158147049	0.832651618469835	0.455037962931154	1.82985088344335	0.0672722396570009	0.715284424755587	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5522191862789	4.1915080655926
Merged-chr2-145823035-4	19.0244262919015	0	1.35268186823737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102978059-4	23.3583080871731	0	1.34006430444319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78580223-4	12.8376044598682	0	1.35772735746345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29252310-4	9.81319917893245	0	1.36325954224715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97355372-8	39.333513934013	-0.213737654659995	0.311835610520701	-0.685417724752786	0.493080362360487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90298831833875	4.61086176617152
Merged-chr7-25105979-4	9.26774517639131	0	1.34732208291255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75414451-5	34.9355197615419	1.29256141685782	0.413120693435042	3.12877432043006	0.00175537072638061	0.0561295278325433	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66915322722295	4.92766896538645
Merged-chr1-171823379-8	27.5547609060019	0.0575101890902495	0.299414786099903	0.192075314113113	0.847683211353354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10521999940254	5.10817043196529
Merged-chr18-64594046-2	3.28139420582763	0	1.40432165738899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16637178-4	8.97261818739398	0	1.34988022608403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5911653-2	5.58737595072924	0	1.38283472755576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15284619-4	9.68598944597418	0	1.34332905992805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56703239-2	6.21985617469506	0	1.36941443911909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99334176-4	12.8861050460749	0	1.36011047519435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53587852-4	11.2666047451138	0	1.35119685256853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10596515-4	10.3846134010264	0	1.35921456564174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31427439-4	7.49415385062379	0	1.36932843412346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129088750-2	7.27188505779735	0	1.3780047667852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36272645-7	16.7787514059611	0	1.34466442877647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24670101-7	26.5102581356021	0	1.34431184957688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58722453-10	64.2271767420096	-0.142750841040698	0.369210196398322	-0.386638403904456	0.699023922670006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68957056472304	4.4871399829907
Merged-chr9-124112748-4	10.6310358316484	0	1.34224703758838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34865325-2	7.35942158051104	0	1.51929801964319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66174690-2	4.23513055351955	0	1.38036546248927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62800232-2	7.15690233265698	-0.0387928699102942	0.68157144454554	-0.056916806331522	0.954611466498404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23609817005302	3.20114811648518
Merged-chr6-38981028-2	3.72380226111895	0	1.43324284791906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122639879-2	2.60997268653773	0	1.60215110063401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8496015-2	5.01854401185879	0	1.37295209469014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80997388-4	8.9588792460135	0	1.37036673595732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104219240-4	15.5875932689332	0	1.34985206505168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44540451-4	9.18439381564744	0	1.35345756220897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26777675-2	3.9422990892494	0	1.43549824833386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10025975-7	37.8770702926399	0.495744254705696	0.284421012886297	1.7429944773591	0.0813345795021369	0.802086235453064	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43622996715548	5.98614927887439
Merged-chr11-31734260-6	25.5885348880377	-1.3616863659517	0.805784173408459	-1.68988968868894	0.0910490606635451	0.857123430292505	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6353513846003	1.13341594473881
Merged-chr2-144165529-5	21.7847062215053	0	1.34147146336951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121462135-8	38.547401467333	0.20822162581517	0.319325083995928	0.652067865165972	0.514357393259698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0101019444359	5.29472304808844
Merged-chr13-63749091-3	14.9697391599123	0.54112566458101	0.994556358233707	0.544087481922118	0.586381274252385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.26296211256663
Merged-chr9-104402430-4	10.3680776831083	2.06094785376634	0.899059668087844	2.29233712390819	0.0218861971885357	0.341772994246369	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	2.85476293333406
Merged-chr19-58107021-4	9.29201983589246	0	1.35585535796784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44380835-7	29.3123400520732	0.599294088366339	0.389037450048967	1.54045346608895	0.123449857353594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11007744509119	4.59942325484707
Merged-chr11-115078580-5	17.9305612785074	0	1.33773683415916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64172279-8	32.1764294135597	-0.512800109115	0.3392791770976	-1.51143996959025	0.13067639233982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28998449968591	4.77263587196599
Merged-chr10-78303790-3	14.352278620257	0	1.3484542276935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142094489-8	59.8821998792627	-0.372488826893904	0.197112712087348	-1.88972503573915	0.0587947439575152	0.657212314782351	C57BL6J_F1_Control-BALBCJ_F1_Control	6.71796838912779	6.35432805447733
Merged-chr2-132018366-4	11.7191185764743	0	1.34545817309104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136582062-4	10.9254064913024	0	1.3495600845478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58040255-4	10.9078181732867	0	1.35526445491742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46828584-4	7.42608261880164	0	1.35037067900373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74003827-3	7.65297707952805	0	1.3847612268743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105877668-2	5.42558493783224	0	1.38315451794025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32363711-4	39.9857061301995	0	1.35326113469165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3483808-1	3.68227171939553	0	1.3934480901757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110642724-3	9.39585285786939	0	1.41385049639796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150195923-1	7.66484029574884	2.69197576388329	0.896312295342492	3.0033904230385	0.00266989675350092	0.0775282679613014	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	3.62724060465327
Merged-chrX-7864751-4	10.4937886250714	0	1.34523276981694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66876742-3	5.22098293515842	0	1.3845469634664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139587528-6	27.6467930564637	1.55090321972903	0.411036153485875	3.77315524820939	0.000161195911065084	0.00868428992030414	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44906518061842	5.02084605317807
Merged-chr19-38022877-10	53.459726958279	-0.688934583345815	0.270059091733173	-2.55105124928179	0.0107398531823931	0.210837009440848	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69286627228751	4.99649417092402
Merged-chr3-126625738-7	39.2557240833151	-0.338862357694004	0.324963931342923	-1.04276913531186	0.297055229378411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80644188264157	4.48990130950245
Merged-chr10-99250959-3	8.15837447919304	0	1.3659223679576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13624957-2	4.39732171641615	0	1.3950764218101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64048682-4	7.17128363420408	0	1.35320187335173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43655381-4	11.6962124283711	0	1.35250383510396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96566359-4	10.9486399738839	0	1.35390715851052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145215539-4	13.9832773553063	0	1.38597062197195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107935413-4	13.5935481528186	0	1.34878642439496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136683960-12	90.5870884666576	0.633157355739558	0.20788711266841	3.04567872251646	0.00232155757446066	0.0698328260380807	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56922188297917	7.18588652101896
Merged-chr3-27643228-3	5.77487233900705	0	1.39947779444914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72833847-5	16.2903195524374	0.202251174050494	0.436115442378024	0.463756048049275	0.642822536201922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37066438665154	3.7674469369211
Merged-chr16-77128888-3	5.29771545024044	0	1.37566441385988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82751039-7	39.5536159354617	-0.788690644116453	0.529852822563863	-1.48850890385017	0.136616735780833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35954739666947	2.2918226953127
Merged-chr19-34471945-4	8.71434884430113	0	1.36700610063382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102944519-2	3.88423476196457	0	1.40027096130845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12132870-4	11.5425522862759	0	1.35035024743742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123797188-4	15.9497946411989	-4.13567673115481	0.713329460667583	-5.7977091360903	6.72269182628747e-09	1.6314232365409e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.30881536555729	1.03838943879457
Merged-chr3-148933327-4	12.3976877296847	0	1.34123765886025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9393613-3	4.84793747586643	0	1.37821906233541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44478658-3	10.1075752308871	0	1.35590650286056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128594299-8	25.4434075599652	-0.199920244235917	0.349620748381621	-0.571820308609653	0.567443717245263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55082078723012	4.38366408202866
Merged-chr14-19986922-4	11.190645296331	0	1.35456902523636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84107260-4	7.26783763110327	0	1.37401710429652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183094927-5	19.8726621673477	-0.309901900903991	0.586524207165889	-0.528370179981914	0.597242430468204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19644357585011	2.43883364868085
Merged-chr16-57563621-3	9.56903596472552	0	1.35703470456424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37744040-6	32.0618097116789	0	1.35283996295088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32359345-3	6.50587893972866	0	1.36355403563833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116328065-4	8.95912791858459	0	1.3518745430568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36699744-4	14.366774864504	0	1.37083618934999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111571879-4	17.9999307769701	-1.2830957920865	0.439567463113399	-2.91899628557242	0.00351160407984919	0.0958594295131191	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80881566349719	2.96452073454821
Merged-chr2-4504678-3	10.4084710725339	0	1.36213073120997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37248751-1	2.99361727322328	0	1.40554710784325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22445054-4	16.1866975986565	0	1.35065591371263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91093853-1	3.60183258340461	0	1.4219421199548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-109289041-2	8.62254050376867	0	1.37305278818149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-5210548-2	3.46202876286166	0	1.42086870134923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118181279-1	2.77061093974563	1.65998929548969	1.37654702965386	1.20590815985931	0.227852904014747	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr2-102948309-1	2.90168683695911	0	1.40634372844059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75962202-4	9.68142192287812	0	1.3560751786175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-32913247-4	7.62112012181462	0	1.35482518943125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24493614-2	8.84333546669359	-0.0555560805038511	0.865784980461793	-0.0641684503168657	0.948836098603471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.39949824061849
Merged-chr7-6282931-4	9.86569137598687	0	1.35355265870867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123329356-9	63.588060737806	1.10225200708178	0.281612569717589	3.91407247264267	9.07523774782681e-05	0.00542707204327962	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34625473718969	6.39904392687266
Merged-chr1-180222184-5	24.0949648684412	0.0288414259405303	0.52553462227351	0.054880163395819	0.956233935375498	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22316726191611	3.24992388414748
Merged-chr17-71259927-6	63.2644755649217	-2.13953119482366	0.251586901741405	-8.5041438167667	1.82940641900061e-17	3.01347586455921e-14	C57BL6J_F1_Control-BALBCJ_F1_Control	6.91705414396729	4.77039219838203
Merged-chr3-98028294-1	2.52397616059376	0	1.47777919259228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91413422-4	17.4940043658858	0	1.34767520665494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8415694-3	5.6512742838661	0	1.39747126742972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125204647-1	1.89771310599071	0	1.63537357579549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4_JH584295_random-595-1	1.37309605957417	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57888247-3	7.07310298698928	0	1.35603972786053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38128695-4	10.3924522662393	0	1.34819808529975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96803231-8	59.0416419694411	-0.406506903572404	0.318204371885845	-1.27750257220928	0.201424872895591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70529816078861	5.39420005137289
Merged-chr13-101918373-4	9.36644553237074	0	1.35527710721109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102730575-4	7.46848998731806	0	1.35816179504522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25022760-4	7.66687176225357	0	1.37434740447239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83075748-10	58.0812885644011	-0.539772087239041	0.301128715180631	-1.79249623177006	0.0730535122588034	0.751853508376947	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17438556347079	4.65712968960363
Merged-chr17-27038434-4	19.1517020985794	0	1.3523757922545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83681762-4	10.7791582856421	-2.9854589337344	1.10578195861412	-2.69986222010357	0.00693681973090139	0.155304194296569	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	0
Merged-chr2-167747637-4	10.8780664702835	0	1.34825700312633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43645372-2	5.26387685947675	0	1.36872182378026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83972330-2	6.95447055542518	0	1.36617347876145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32017783-7	39.0654831215319	0.683609130449635	0.506099092117022	1.35074166521438	0.176778200486335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34740663758097	3.5571208775003
Merged-chr3-9946685-8	48.0027802644369	-0.438375429458293	0.313238708753707	-1.39949315715951	0.161665148910558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2910579552575	4.85172035873749
Merged-chr1-173962859-3	15.3208723556088	-1.57049771289047	0.757197848313644	-2.07409162134854	0.0380708025787639	0.492501370152076	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28321719566487	1.48939074597659
Merged-chr15-59525940-3	8.31249392293413	0	1.35311336025758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158174086-4	9.38005085574158	0	1.3593153920575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111107585-4	9.19435539503895	0	1.35076597262581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91636164-8	47.5589482680304	-0.136850192299888	0.264459673466765	-0.517470926685865	0.604827459046229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.46350477786062	6.43965336702289
Merged-chr1-74307653-4	7.30584537773274	0	1.3611856005548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139330770-7	37.2920025979652	1.36705477456706	0.354097689937826	3.86067125941176	0.000113075953108739	0.00651823513789812	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55525978848925	6.00600641603016
Merged-chr3-20198056-4	9.98086009741068	0	1.34486471004776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29428987-4	10.2186003972161	0	1.35786312093098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55238338-4	10.0312986730776	0	1.3569395766737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73804689-4	10.5021255549234	-1.17497723361313	1.00745094650099	-1.16628728941492	0.243498310481052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0.577068348605183
Merged-chr2-129320269-5	54.4769911644202	0.085545822137973	0.630939223387831	0.135584885147312	0.89214945500618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17313435946258	1.98363123366187
Merged-chr2-165955013-8	29.717335444062	-0.647458802753941	0.333565266678768	-1.94102584241021	0.05225514290172	0.607991719390967	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04361592355299	4.41356930314003
Merged-chr2-173528742-3	13.2398510672648	-0.315604420283454	0.49487001667582	-0.637752156421714	0.523635028087621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62036252767134	3.36943411785746
Merged-chr1-170959988-3	9.73498390568878	0	1.35467826619896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-8677664-8	36.9938415840171	1.30364440046557	0.3108475166147	4.19383887850537	2.74272830011014e-05	0.00201203735041413	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38549740377108	5.85374803650532
Merged-chr2-154574362-3	11.8066768522662	2.01951003189899	0.817758151077688	2.46956881962908	0.0135275995519953	0.248511924314604	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	3.04718983630349
Merged-chr15-64185406-4	15.6955935896492	4.57154146774652	0.932440550616076	4.90276990283835	9.44946479958841e-07	0.000121172091619316	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	4.73229646450692
Merged-chr5-72208666-2	6.64893632230573	0	1.37257958607203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47230509-4	10.2903308479921	0.540709832422113	0.586602077489339	0.921765969081384	0.356650661914121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3412244690151	2.6711870729367
Merged-chr10-24638116-4	9.92455898916727	0	1.35414639049636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31763452-4	9.54083860474631	0	1.34178017307418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24038355-8	36.8597957860192	-0.0504408046836404	0.295038594725444	-0.170963411517668	0.86425253535345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35554536551788	5.31346614755175
Merged-chr2-125788494-6	20.1084331446059	0.267484247477939	0.518435385654219	0.515945197568637	0.605892685459282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1331985207636	3.30757078654461
Merged-chr3-45254987-1	3.8860701852805	0	1.39794674284938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112840869-3	10.3656924311356	0	1.35161621908739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150927291-4	9.15434635572351	0	1.35846527935145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99523476-2	5.35929072582108	0	1.35551838065788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136029597-5	22.932867613725	-1.41889807052089	0.414641842006666	-3.42198477523182	0.000621657944900912	0.0252184359902005	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28752457138916	3.86911880559759
Merged-chr7-66125565-4	8.80447245644692	0	1.35550572227837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89785524-5	19.8214399207038	0	1.33780524833701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50382926-5	30.3842600051467	-1.93363699905956	0.483948957271357	-3.99553913694113	6.45471924271501e-05	0.00408465754731951	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92531664340143	2.88084211046576
Merged-chr8-115506820-4	13.3704862879866	0	1.34068726623294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60016303-8	51.3351649073247	-0.614446290203434	0.209320368416284	-2.93543478282753	0.00333080619902513	0.0925188013146689	C57BL6J_F1_Control-BALBCJ_F1_Control	6.46315023311424	5.83811379137993
Merged-chr7-122813955-3	7.3369800815474	0	1.36414991543738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60789481-8	41.5076411416813	0.864110357781456	0.285351464548078	3.02823172521641	0.00245989381695726	0.0729898296921287	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96163476013662	5.75353706515306
Merged-chr17-47395625-13	63.8192020017411	0.599243880924524	0.242870498385581	2.46733911655735	0.0136121375327713	0.249643112059351	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07722643139115	5.6864527576796
Merged-chr2-4391388-4	8.96960284820231	0	1.39173857047846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-6281017-2	5.44108216091934	0	1.40056744570765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75609660-1	3.41662954643792	0.620737831606387	1.40539430726782	0.441682329575635	0.658719098305715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr9-90034062-8	72.554170324688	1.4782928595565	0.291150526526162	5.07741777833833	3.82598985889821e-07	5.47307849315389e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44053472138501	5.91721677801206
Merged-chr1-64036030-3	8.75001052356311	0	1.40639920774508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158163269-4	10.9528428128425	0	1.34825968959774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120527701-8	60.9994364165058	1.21369543197478	0.345021570151913	3.51773783720361	0.000435242123434897	0.0195032090092025	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29447423760207	5.46528736998717
Merged-chr2-103583472-8	33.8692907962899	0.463193935453644	0.414593298027402	1.11722485061259	0.2638981977492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70792077877654	4.31843628674951
Merged-chr1-135686906-4	8.630470928516	0	1.34712946235595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60370451-2	4.21393868373957	0	1.48549207787924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148325431-2	5.17670910312626	1.80069965771212	1.2612707735616	1.42768681829301	0.153382021941729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr9-41072333-7	21.820006859915	0.894309785943558	0.386522308001656	2.31373394867477	0.0206823204783961	0.327680052137899	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70188643802779	4.43610516134172
Merged-chr6-13598535-5	14.0289965387951	-0.0381939140498771	1.37294906146386	-0.0278188864553752	0.977806602578472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.303163067301871
Merged-chr7-73533106-3	10.2436260750252	0	1.35258795482845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41238256-3	8.93014768296287	0	1.35710148814466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136555788-3	8.32907814415503	0	1.35255800933856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46963476-4	7.33143215082067	0	1.35559858846352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48322553-4	9.32331252284947	0	1.35262405135537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6396148-4	10.8824562524095	0	1.38191584231458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118980551-4	7.47615573575473	0	1.36290144805346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59823739-4	14.1868323329698	0	1.34306462968383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90490466-4	11.0473938952533	0	1.34979151474898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16213483-2	7.5343505326138	0	1.36770666311117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98427408-5	26.3526190107252	-0.32253455730297	0.452970838595772	-0.712042652244105	0.476438364472784	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97273412953957	3.610186244432
Merged-chr3-126696762-8	31.5988155342185	0.291488908966144	0.344287859491118	0.846643007967186	0.397194134176262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40232596016987	4.69252217891815
Merged-chr2-166294368-2	4.8098813635702	0	1.3902862152792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13391551-4	9.87026720036478	0	1.34847637671373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43770788-3	12.0620198069573	0	1.36351459925399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57031628-2	11.5832823620144	1.48322883635255	1.24935561075287	1.18719508167795	0.235150680446051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02674429890598
Merged-chr14-105164953-4	11.6363718194317	0	1.36108714554228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120709392-7	29.5206923604269	-0.331845472648305	0.460871708581865	-0.720038714611962	0.471501159206541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54097642503113	4.00499522759968
Merged-chr10-67069171-4	7.73580694672852	0	1.35318728329708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68978833-3	9.51376895260651	0	1.35429054381193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99266225-3	11.1680115998954	0	1.35453030195537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113627285-4	12.8712804537183	0	1.35321621867919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73441373-4	11.2291435973084	0	1.34833463898535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154016919-1	3.15515136414318	0	1.50476709711184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3345285-3	7.57634954282311	0	1.3665860602013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46835643-3	10.0915780550845	0	1.38547266837632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14884548-4	13.5393900423657	0	1.34404282767355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121693362-7	21.3590856612301	0	1.33908979097023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120363986-4	15.8927601544806	0	1.35386272234559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79802587-4	7.81790134450035	0	1.34839499883231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156190472-9	82.3803326613046	1.09423692266827	0.218846109394683	5.00002913323375	5.73216524173038e-07	7.88847519937271e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.38266484044058	7.46877098044534
Merged-chr12-70910413-4	7.82850551965618	0	1.34609051030988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17657920-9	49.1084615069227	-0.221757452164666	0.354735756814172	-0.625134196102012	0.531882985945511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44213656632433	4.24386775654466
Merged-chr2-68873913-4	15.5218953513104	0	1.35132260498632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61310150-4	8.02301536395169	0	1.34916495750126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156995325-2	10.2185775408088	0.0949253086821017	1.19560891257184	0.0793949490372324	0.936718486045481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.01087566452899	1.30430658010148
Merged-chr12-91735797-4	10.6318593078064	0	1.34390062346156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120848889-2	4.98489835835354	0	1.38655951756493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40783180-3	12.5610168437694	0.400180500486919	0.528243495917278	0.757568249452873	0.448709493731023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22182750332539	3.47459115111749
Merged-chr1-21036064-8	44.9714777238907	-1.4470566485918	0.323939709812296	-4.46705545741917	7.93035770672236e-06	0.000733921135828655	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90973285903506	4.46084527939117
Merged-chr5-24781243-4	7.78636566514552	0	1.35311630890631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60176239-4	10.9274698556687	0	1.35366086225269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128871889-5	21.0561026308391	0.04757734062324	0.497542937100662	0.0956245925235881	0.923818732691332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01711783372272	4.02414042702037
Merged-chr19-34621123-4	16.9103173872934	0	1.39187644862751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26966612-6	22.281451657166	0	1.33555182238524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100197148-3	8.73135631975056	0	1.35329725572176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24554638-4	14.3829227241617	0	1.34377967590931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36590109-2	4.57701844789863	0	1.37077890220495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35319821-10	36.650806773249	-0.373770449568541	0.289439179144675	-1.2913609369439	0.196578549362634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5862604868722	5.21461725256861
Merged-chr17-83668144-4	6.48905263737535	0	1.35094654266317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80240090-2	4.89393779353755	0	1.38296562031361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-130318957-4	12.1767838462262	0	1.34319164515374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13531141-4	12.3859744975032	0	1.35809763129157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3283183-4	8.31878951064386	0	1.34533203947279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43799715-6	20.6769911266718	-1.70648788017164	0.743176758987052	-2.29620727442766	0.0216640328158262	0.339082971447019	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54068926719999	1.39293125551424
Merged-chr10-7260670-6	19.5742917487661	-1.21836699975073	0.467793005178212	-2.604500251744	0.00920083533647954	0.189737559960429	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8910446049284	3.67129780737164
Merged-chr3-121494149-4	14.3780905844015	0	1.3590399065315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64986986-11	62.825314449172	0.18822247133252	0.273748786906619	0.687573718442543	0.491721263220387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45638531007242	5.61815238198068
Merged-chr1-181232821-4	7.63549341341565	0	1.35846187931166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5711564-2	6.22540636958157	0	1.40621130050821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47015110-2	6.59526978277571	0	1.35224949283745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-14848994-2	2.94363490869216	0	1.46421187956917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123692381-1	1.25070023310072	0	2.04158870859108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108915683-2	3.50792275035763	0	1.4262353794819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89081498-1	1.36003872602851	0	1.60336760667512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20815518-4	10.0268794954931	0	1.34436083107624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167254400-4	12.992475433869	0	1.36536953663531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42144942-1	3.30683171602938	0	1.38676103766665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75245036-3	15.7636426685124	-1.13948560364585	0.454124860048959	-2.50919010142498	0.0121008342200041	0.229618605908138	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48706914856655	4.34743993933148
Merged-chr2-160211588-1	3.00616834528177	0	1.42310005857556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38787974-1	2.34545701373934	0	1.51625337308415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39617464-1	2.5288443022079	0	1.47863013008305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70218097-2	2.49541752863925	0	1.45359304707351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115136994-4	10.8819461194247	0	1.35516142369852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45654883-4	6.99189215031342	0	1.36622126976294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4160539-4	14.9429953550087	0	1.3518120913647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8567342-8	35.0934444469131	0.152877677772031	0.348697357045675	0.438425111871456	0.661078146000237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8726605045111	5.00687834987372
Merged-chr18-46472986-4	14.4857364381604	0	1.35137694063225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-119879363-4	14.1215681796022	0	1.35485410352562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99182652-4	7.45757826032523	0	1.37102913830361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9472863-4	9.36974311367983	0	1.35650933840733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55028655-4	7.79922683098279	0	1.35765049671847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-42897287-4	12.265516395311	0	1.34852456319214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14233102-4	11.4957040225834	0	1.37115175790766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87732169-4	10.4870534488503	0	1.3541385445866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103852727-8	24.5000727854956	0.45854379326644	0.305772715678985	1.49962298712041	0.133712089758202	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8305282876571	5.2298851312148
Merged-chr2-35209528-5	18.5980747257264	0	1.34324357192319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31155953-4	6.35442411338934	0	1.36555029144608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184542507-4	10.3154263075514	0	1.36256509162756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93034180-4	9.78758591978768	0	1.35092405645234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21567371-4	9.34271769508165	0	1.35950367826624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136640110-3	6.2849873891428	0	1.38373486719607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114917311-4	13.6503284688466	0	1.35239399636821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67382532-4	12.6416287817807	0	1.34248658218898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71284901-4	8.52702549258082	0	1.36007805483182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32812609-4	10.4760098247552	0	1.36435156656847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60432200-9	78.7296121942587	1.14553748883345	0.470758931661353	2.43338450274484	0.0149584068018162	0.266510663828228	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5340712553412	4.32809010062675
Merged-chr13-97295543-4	13.7886616531092	0	1.37955727689579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126585854-7	31.2206689577873	0.0394063210042021	0.372617615038708	0.105755389476444	0.915776432265301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23507849228923	4.2387185687596
Merged-chr4-53125251-3	14.9888780529094	0	1.35100994446796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93171333-3	9.6984616198551	1.25288705100055	0.683559441431528	1.83288676164975	0.066819412866945	0.712063607926732	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49705754145624	3.22617064497552
Merged-chr5-19897269-4	11.7445104578943	0	1.35039653089615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70330851-4	18.6361469105325	0	1.34411528639009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130731424-2	6.34831688266441	0	1.38358887969593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83527394-4	10.0007733214158	0	1.34682754488223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77441793-2	5.22509611214829	0	1.37165569151907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124493574-2	6.14756139434711	0	1.35593682967807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119801122-4	9.21393902760878	0	1.34416262883448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-31956598-4	7.86250798607556	0	1.36110803428904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52035983-4	18.7911754882574	0	1.35814300889592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108098600-4	24.0772652365594	4.10883767408252	0.517443449839498	7.94065066502825	2.01123383931211e-15	2.42952578380371e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12114437764854	6.21278261465203
Merged-chr4-114652607-4	7.05724622285095	0	1.35288119093213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140566965-8	35.7049958364249	1.38164613011896	0.287837784637628	4.80008603407776	1.58597483124533e-06	0.000187417404025359	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27796176093522	5.74657871821618
Merged-chr6-86594820-4	10.016093095827	0	1.36672599793899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118764170-7	36.8744340388908	-0.186225819933055	0.295528808618148	-0.630144386951044	0.528600121061837	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76783757881703	5.7265667333985
Merged-chr2-128422845-4	9.67261805834017	1.78589277553391	1.24971025938487	1.4290454624362	0.152991167061885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr9-62977421-4	8.47726726013025	0	1.36434966356225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99478782-4	14.9046764077911	0	1.36671696805645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3323338-4	9.0892465979895	0	1.37352272700642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136031520-7	24.0540266790484	0.507231681107119	0.488143039856194	1.03910460601169	0.298756089038725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58581958480759	3.7722969162639
Merged-chr10-122736306-4	8.93486570349623	0	1.36144409942887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98511506-4	14.3809391484984	0	1.34543379846999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93237817-4	11.9978874077842	0	1.34701293724543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133444960-4	8.62876283991169	0	1.35825544688764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115631695-3	7.71801140441682	0	1.3574061253479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97774410-1	3.82666453639841	0	1.41421124690765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54402321-3	6.63810359660153	0	1.37056264025868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60362352-3	13.7914827982873	0	1.38455143436531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9631234-3	5.88670107111056	0	1.36918075441453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12668319-1	4.29452046050379	0.967588584466527	0.970336695138818	0.997167879267003	0.318683029296579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.05305571773558
Merged-chr10-53927668-3	14.3791356987647	0	1.34072779125826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24686459-6	22.2430051488259	0.122093555573496	0.394483089554403	0.309502634729943	0.756939208266897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34382304324862	4.34025185877257
Merged-chr11-103178309-4	14.3472563965292	0	1.34314921148935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14102122-2	8.85618717627915	2.30306923965687	1.23246786048435	1.8686647445328	0.0616694719074012	0.678316042358344	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.730937814817307
Merged-chr12-79015162-2	5.61325466748031	0	1.3879636931718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97995918-4	7.34258378898408	0	1.37191216041336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117764762-4	11.4883858418108	0	1.3495006090048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50060128-8	30.3227466473732	0.164215058935821	0.339213526526624	0.484105279106351	0.628311154922833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72356102964664	4.90070214170239
Merged-chr19-29494596-4	7.94683780177121	0	1.34780063389963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103282003-8	49.6541162224921	0.713913336558093	0.323236445795334	2.20864121557049	0.0271996061873361	0.397721303159075	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24804141293641	4.99637153847265
Merged-chr13-38028129-4	17.1784718754548	3.20296829733169	0.646000037438016	4.95815497168452	7.11657875770857e-07	9.67125261725701e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0995156753045	5.3700624261043
Merged-chr1-60621963-3	5.88497829085813	0	1.42290698139427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49178041-4	13.2676150788984	0	1.37231491541583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118659865-2	3.33225889330468	0	1.42708706126605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10430105-4	9.46572794788195	0	1.35351679831283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100213846-2	3.39694340964967	0	1.46823471850796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100961332-4	10.0400075665631	0	1.34489873592991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140846937-4	19.0074640400531	0	1.39269191534584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69006074-8	51.2125531360499	0.486855052332857	0.246856802377673	1.97221647385679	0.0485848998548882	0.578739528882493	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77718284460614	6.2594522437444
Merged-chr9-85588260-4	13.9556083835522	0	1.35254220527934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59177530-4	10.3359720141465	0	1.35396816634655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52625205-2	3.94791322327763	0	1.37606376828747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174343674-2	6.45351083921391	0	1.36619159972623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8810971-2	5.37556852119583	0	1.4492625375176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59870281-8	59.0875625697255	0.396314892726775	0.309323644560676	1.2812305159848	0.200112710507792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89489321994528	5.25586144207071
Merged-chr17-87530604-8	46.804779178159	0.432828103816011	0.343697836190712	1.25932740401613	0.207912098905893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03727341796342	5.44494478546915
Merged-chr6-50503227-2	8.68913195965506	1.22535897796375	1.3534892363831	0.905333374677029	0.365288800435286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr18-34855447-3	19.7211429439557	0	1.36206488362396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17459726-3	7.72964069220655	-0.0324341338150309	1.19373092148535	-0.0271703892655083	0.978323832926516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr15-77945943-7	35.4269921071879	0.573156430727733	0.385879341760506	1.48532551162964	0.137457616998465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88872003537756	4.48459603094351
Merged-chr4-139188168-7	31.312039616105	-0.45307365345475	0.376178209172425	-1.20441227696706	0.228430269210803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69024726894514	4.19362890871095
Merged-chr10-30712678-4	14.0402717658835	0	1.36409014793439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17612849-4	11.986391010958	0	1.34957361601767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4554989-4	14.6072573389574	0	1.33718937598424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70645039-4	12.0679014242551	0	1.35332857569046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122559259-6	17.0273741799843	0.0277507643151735	0.654592776121987	0.0423939360889036	0.966184662305303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99170652413272	2.13750051620966
Merged-chr19-45176401-6	40.3133211627747	1.72541775218103	0.32226857434028	5.35397457140571	8.60429572453716e-08	1.50415245649992e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11754644797313	5.77921741751182
Merged-chr13-21975039-5	14.9866310725068	0	1.3428489942706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64002119-4	8.85167463818046	0	1.34836354259864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141157708-4	7.61957332559311	0	1.35736655007891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19559869-8	41.4834100385234	-0.286479225361344	0.333887755399215	-0.858010576095592	0.390886623499108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.09678109834406	5.80242330585109
Merged-chr5-17821617-2	5.71177824813626	0	1.3673130269051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111563458-4	8.30561800894099	0	1.35640155646068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160250139-3	6.90236301877709	0	1.37844242229366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111074059-4	16.3805550596392	-0.11075948381717	0.542269406876382	-0.20425176565865	0.838156760754521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3121506469761	3.2257412715904
Merged-chr3-127449405-1	4.8653365353838	-2.25163268835734	1.28947187945204	-1.74616656961466	0.0807820120178987	0.79898642490556	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	0.303163067301871
Merged-chr5-92511434-3	7.98214652803081	0	1.34744443030644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60759216-1	6.72310228797403	0.795289210482358	0.681851041331959	1.16636796349068	0.243465705474138	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79675306089341	3.77751210863656
Merged-chr10-95525123-4	8.68418134574207	0	1.38563669631592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35802353-8	40.0047163605404	0.332546584753433	0.373573062030404	0.890178170090774	0.373370224373558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29541133256113	4.70165262561204
Merged-chr10-69888632-4	9.46539588172749	0	1.35955872987849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72844324-8	97.7242637152754	-0.179830730666469	0.290994053750384	-0.617987647337732	0.536583481318224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05482046265187	4.8341624244673
Merged-chr16-22446198-4	11.6456981510235	0	1.34923898805301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155107454-2	5.77943148040462	0	1.3837332447282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3895420-4	13.1699564793052	0	1.35571190604443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29039797-4	10.1618667881514	0	1.35657540283794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43474125-4	7.36232551964236	0	1.36735164896151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165641607-3	7.91591828099464	0	1.34695097873466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5953547-8	38.2542973924387	0.00951051112365297	0.423759815348282	0.0224431642151732	0.982094448947707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56464841047007	4.29044612401247
Merged-chr17-74819784-4	8.56643169808233	0	1.36920577725013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34270371-6	25.2163707850095	0.907207314461058	0.621974999685047	1.45859128569548	0.144677633507505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66840304550736	3.34777063734244
Merged-chr11-103032956-2	6.23865878689255	0	1.36164988483261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65794546-4	12.1393128218697	0	1.36036850103784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97830164-8	54.1828159516192	0.444991393587819	0.307139322543337	1.44882586151121	0.147386219609125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70917531115039	5.10273970686309
Merged-chr5-148493172-8	49.9570513240099	0.180531552605753	0.27490652627671	0.656701588903123	0.511372812589251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33145467998038	5.4701479569499
Merged-chr7-132713606-4	8.52843389220156	0	1.35093521954029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85874382-4	9.53748646064471	0	1.3582732576495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-58538515-8	45.6284802620213	-0.0912212179762061	0.248765591498582	-0.366695479976482	0.713846178513272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.11203489705467	6.02902713049251
Merged-chr13-111508804-3	12.9433223636777	0	1.35943947360004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84139737-3	9.52892112120069	0	1.36802725175245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14837796-4	10.7099929375398	0	1.36154362208878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93953335-1	8.10186315506194	0.1233111525309	1.42359760856024	0.0866193872407607	0.930974055030544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.3480509837169	1.76268518758437
Merged-chr3-98083161-4	8.32498097276111	0	1.34770167754925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52398000-4	18.8191245051189	0	1.35082180838795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67458076-4	9.83233853078744	0	1.35084822108098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67369765-6	17.3217344807116	0.340104259768475	0.612637439839971	0.555147690381631	0.57879364501995	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2697975943465	2.64504150018318
Merged-chr3-105892660-4	14.3781259671089	1.32333733073527	0.984508892344633	1.34415985576698	0.178896699961031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.04567094108452
Merged-chr10-94601190-4	12.8408872044028	0	1.33995473744522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107899921-7	48.1482469704655	1.1306811397791	0.429664744600505	2.63154274114436	0.00849981750635088	0.18041451769923	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85514174041861	4.65561637168592
Merged-chr15-66846123-4	16.5813894767274	0	1.37668841201584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79394518-1	4.34700642539392	1.46294585899094	1.14303467664828	1.27987880759728	0.200587761960085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30219722357347	3.05219992864101
Merged-chr5-64872484-1	2.52322912192486	0	1.49988036865485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130718601-2	5.57861678151626	0	1.38198364218781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77414380-1	4.86006359476329	0	1.38398748356312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10287644-1	2.64371405852836	0	1.41169289037369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67050605-2	2.74204990728031	0	1.53943409991136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80079783-4	9.70406243832178	0	1.36285558184168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87749185-1	9.88528545460611	-0.448095012718056	0.52278536230829	-0.857129990670648	0.39137304823541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85383093935221	3.30158484585049
Merged-chr2-50660170-2	2.06669354593962	0	1.59052457310287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80510489-4	7.37941816610671	0	1.35428483558753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17771651-2	2.56079262096669	0	1.49043308542898	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77509196-3	5.7914810960564	0	1.40681436426532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68269942-2	11.5499477532321	-0.0319946546188359	0.722322939457217	-0.044294113991282	0.964669963426167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16523349939429	1.80156422118561
Merged-chr1-77741422-9	124.543495826488	0.278776050935859	0.185849242704549	1.50001176695156	0.133611354510068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.85521578882656	7.1349595755293
Merged-chr19-44389097-8	24.5892109523174	-0.275068739858442	0.346469364171224	-0.793919371533537	0.427242371547533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32275280442238	5.03129358767915
Merged-chr2-156258665-7	30.7171169274446	0.235373127471256	0.463448217059095	0.507873628179786	0.611541970275708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4926091983098	3.74576723612452
Merged-chr12-112873732-4	8.16445384119521	0	1.34670070557081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72723592-4	13.5672598775587	0	1.35256636712274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116849131-3	12.9351421559281	0.27724039331099	0.935775431735976	0.296268083034277	0.767025358421714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.40024388691264
Merged-chr4-119126121-7	44.4495120144207	0.815932561590579	0.354294851005683	2.30297606435576	0.0212801898521869	0.334626457807927	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85671780618854	4.73763884113181
Merged-chr13-33047653-8	46.2490202763326	0.0768727390326934	0.317952708751871	0.241774128405632	0.808955186797878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92004727904735	5.06645714307494
Merged-chr10-83184140-4	12.3795767230096	0	1.34456528200841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142363314-5	22.7024425802377	3.76610104663284	1.05843020939546	3.55819496949536	0.000373412102905492	0.0172751561717784	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.78969832313398
Merged-chr5-65867742-9	54.4484269615996	-0.720258495247693	0.477895334316005	-1.50714694940174	0.131772994821634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07172379387659	2.54704962671647
Merged-chr2-75823969-4	7.43773959652662	0	1.34833973071207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91581896-4	7.70914389964063	0	1.3602635530546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100674040-8	29.6001631445809	0.627175282501825	0.397556213559398	1.57757635552115	0.114662967861669	0.988992240340834	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15772047053938	4.81012379612552
Merged-chr1-56192460-3	10.6550985019435	-1.61425212764637	0.75275425366799	-2.1444609841532	0.0319959683820853	0.440767573563552	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11842126918385	1.63990324542946
Merged-chr3-65891800-8	41.8450655588584	0.151682296866249	0.277920233326596	0.54577637277672	0.585219666341383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98439888250874	6.1691826294956
Merged-chr10-20774019-4	8.6540600549462	0	1.35408279407533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85710389-3	7.29727496430478	0	1.38968047803026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121320647-4	6.36109910809965	0	1.39177192620701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-151746177-4	12.2546008080365	4.33700852135236	0.888374554297787	4.8819594171971	1.05036876200809e-06	0.000132783710544181	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	4.72658298767683
Merged-chr15-59481320-6	30.1542439918586	-0.415379552937223	0.502295966828361	-0.826961752370913	0.408258740426571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13427165235128	3.59546878130337
Merged-chr2-164559411-1	7.6589446957806	-0.651681591434909	0.790702308636531	-0.824180711649437	0.409836884994788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53626350514546	2.62125646170901
Merged-chr5-43048770-3	10.1888402437307	0	1.36055471773866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75853645-4	9.3010739255591	0	1.35144457444605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26503054-8	66.2650840082641	-0.1155727002791	0.351894231885768	-0.328430220807419	0.742586396189397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21631554243329	4.96938752677001
Merged-chr6-54075732-7	38.4290999225684	0.64198370938208	0.363240211539043	1.76738061753132	0.0771645067469357	0.776918952075695	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92707202270963	4.51984054387616
Merged-chr10-40500086-4	15.1490858101809	0	1.34566941506044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142273449-4	9.07401287918339	0	1.35205359090108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87119181-2	8.0006395418867	-0.669929103482378	1.33115140227699	-0.503270403604305	0.6147741718632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.376242425970964
Merged-chr7-48749425-4	7.83034640167373	0	1.34801769669099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32292151-4	11.9767540901454	0	1.36239535203343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153262149-4	14.0981574103673	0	1.34950607983916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50830095-4	11.0194817919504	0	1.35509825095955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3199126-4	11.270948718479	0	1.35602287346245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93072667-4	8.79522461738306	0	1.34781792017591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170996958-4	8.34249669380118	0	1.35237949734709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67275483-8	50.5285416988735	-0.00875968864852427	0.335255090903525	-0.0261284284301741	0.979154902191054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3376246531166	4.3783478054055
Merged-chr2-128855637-8	32.8259102300938	-0.349481616712437	0.289819930361602	-1.20585777615913	0.227872333650075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49768615001815	5.14156331386486
Merged-chr4-3391851-5	22.9757512468172	0	1.34253691311371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-98406496-1	5.01366869414564	0	1.42523841427958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61671242-4	8.29306534969162	0	1.3542160208377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24519177-3	7.22394255599753	0	1.3775494734535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59652497-1	3.47547300270341	0	1.43103134717152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67115246-4	9.19070789508759	0	1.34437993999604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125333210-3	9.47243611037513	0	1.36775668699858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163713370-2	7.10895867212929	0	1.35457913573813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-101740264-4	13.2836660500592	1.17382402720803	0.84488915106155	1.38932311503017	0.164734518038595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48219169541115	2.55196233990152
Merged-chr3-103851033-9	38.0679123889209	0.62144862281521	0.377162631484479	1.64769404744379	0.0994154701612682	0.907798680076664	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79318102580527	4.58748209602734
Merged-chr8-84192164-10	72.0117784851377	0.0898060230059364	0.243324191592238	0.369079713851194	0.712068309174257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14878333219012	6.36928054900064
Merged-chr12-99480589-4	9.78118810555713	0	1.35737185547761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76703606-8	48.7009439466867	1.40368193999857	0.343690074718434	4.08415035304273	4.42383816770695e-05	0.00298727228519729	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00785531952091	5.61902696602602
Merged-chr17-27178204-2	5.52443726005744	1.78732712013072	1.26138081065317	1.41696076635668	0.156494398524244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.977057525713991
Merged-chr1-55505159-4	9.92294299312084	0	1.34946878773543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185277186-1	5.25492565604946	0	1.76965400638644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63929290-2	7.56654934979882	-0.035009544736276	1.15725138974021	-0.0302523246432525	0.975865818574687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr13-47251260-6	21.8897754568374	0.221895031820227	0.494547761455844	0.448682714015355	0.653660556106875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21634110942005	3.46445329703073
Merged-chr13-58478111-4	8.20099725113253	0	1.36356376430675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56812233-4	13.8911740216059	0	1.35153193900013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32353309-4	9.12136748596209	0	1.34982026948094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89092972-9	99.1356711143905	-0.421352764652979	0.174485098677688	-2.41483523719873	0.015742328936413	0.274891506153059	C57BL6J_F1_Control-BALBCJ_F1_Control	6.92971005899506	6.49909780424117
Merged-chr1-162518371-2	6.96672273285383	2.48819427494765	1.29533049949465	1.9208953050348	0.0547449077912159	0.627293094987922	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.788686275880602
Merged-chr10-34150373-2	3.78241680530806	0	1.46148938354667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184444376-4	12.4536631778806	0	1.35102210934131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88611172-3	12.4913595473285	0.232093887073173	0.829395349690117	0.279835047495612	0.779604061447604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56586581096048	1.32471430176536
Merged-chr10-53348507-4	9.67045373200009	0	1.35018117930787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90876493-8	62.7426334952737	-0.0825348741249427	0.281991790692549	-0.292685378968813	0.769762646635179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05511638466263	4.90919131037244
Merged-chr5-92353819-8	58.2309033017132	-0.342920869381524	0.340618569310399	-1.00675917368741	0.314050518248578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04626231301397	4.6379101892976
Merged-chr11-109420223-9	69.7029028335854	0.465534128835635	0.239854028050957	1.94090602779759	0.052269676744602	0.608030677971287	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3395437941586	5.89839396022245
Merged-chr1-166137717-4	11.9274265432921	0	1.34798769870063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172334801-9	63.9260859435662	-0.484874319304569	0.269075875523885	-1.80199848225163	0.0715456443538357	0.741638001798275	C57BL6J_F1_Control-BALBCJ_F1_Control	6.32674492068235	5.87167194836098
Merged-chr9-50459685-4	8.03305998304536	0	1.35421193395158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77662984-7	27.1441957708376	0.446490623521539	0.377853263556241	1.18165083270501	0.237344274813235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20008569793247	4.50182571868196
Merged-chr3-87329956-8	37.9993810160645	0.766850071987076	0.268097615547629	2.86033902398077	0.00423188337397168	0.109335051485611	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26565417806179	6.00687955728397
Merged-chr15-101165778-3	8.30428615248542	0	1.36081916064328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13905780-3	8.09598907929979	0	1.37956488727728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64185049-2	9.24095212127253	-3.35649251099096	1.10574232682131	-3.03551056116294	0.00240128813529318	0.0716026449513999	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45063110846411	0
Merged-chr13-60738651-8	27.0886653656743	-0.147411998495851	0.34130092747995	-0.431912094655854	0.665805304021643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96534339225555	4.76331389715896
Merged-chr10-60817032-4	8.55211180584029	0	1.35949140942178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83946724-4	10.7465052379621	0	1.3635178894464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160363344-1	4.4159217719515	0	1.37423521474145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115682518-4	13.9010256586689	0	1.34563018120368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111557740-4	7.80638783116154	0	1.35531440726086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75154389-4	12.4631722199909	0	1.35409711055622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104794612-4	7.79708582735091	0	1.36938276946765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40504195-2	4.22465742727193	0	1.43459596395222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80413414-4	16.3254448908864	0	1.37194833491367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80161711-2	4.51297189958468	0	1.36865173418365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77185169-2	4.94168951792927	0	1.38649216159013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25054760-4	15.2061666981312	3.99087718551209	0.744174777193729	5.36282242803448	8.19315408237491e-08	1.46023495988137e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	5.21138210474529
Merged-chr19-37963700-13	95.8089143847568	-0.230876704347743	0.171013032260344	-1.35005327545017	0.176998894501404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.21109734664564	6.95223941933173
Merged-chr6-32570063-3	4.24465475687122	0	1.44437297464352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39243586-3	7.85293208116746	0	1.39587982592615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85770927-4	10.2001368563765	0	1.35545504394146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58145818-5	24.8942604593739	2.37594230833668	0.360254134142484	6.59518401917069	4.24728715085118e-11	1.77598678640861e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76175558206833	6.11766150294266
Merged-chr19-34519844-4	9.78174939328884	0	1.35555247379616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137890792-8	65.9374889183068	1.31695965750867	0.266056513755665	4.94992450633293	7.42422742308822e-07	0.000100391437435735	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6489218393805	5.95333490687985
Merged-chr9-7869013-4	11.9044276506991	0	1.34517912603628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26885175-4	9.17782036377263	0	1.35543152210914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-139919098-4	11.5890231685661	0	1.35056433387904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103744787-3	6.64620338167381	0	1.36240866860783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164439073-2	7.2272067519044	0	1.39524737227515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20800748-6	25.7433144924983	0.87019000846977	0.505525855670097	1.72135608635941	0.0851862277278416	0.823517366718431	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6025168295641	3.95295669468537
Merged-chr11-110980430-5	15.8428598776378	-0.156097076745859	0.440267697143806	-0.354550374144013	0.722926459423589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20912490755604	4.08914015425467
Merged-chr3-109448418-8	33.6590531230449	-0.134851087632752	0.325524036182875	-0.414258465255066	0.678684828534859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49849242932256	5.43029131854843
Merged-chr6-134247457-10	70.7252961267471	0.576866419072659	0.220139304391041	2.62046080625363	0.00878110232147908	0.184390231031534	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79460377699903	6.33268966591084
Merged-chr1-135399684-4	6.64257022935087	0	1.37171543594054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24640712-4	7.17220838413465	0	1.35527766208663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112752175-4	9.11376023127984	0	1.34923670319513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66102964-2	6.8936319472003	0	1.36024797440477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90060365-15	121.313938013399	-0.414616234882642	0.18105057627875	-2.29005752649077	0.0220179820968464	0.343239314253649	C57BL6J_F1_Control-BALBCJ_F1_Control	6.94101537480749	6.47914010809781
Merged-chr13-45144139-3	10.7368708596621	0.29159565115949	0.646926144118697	0.450740248806499	0.652176770208164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80630566595322	3.12132581022207
Merged-chr12-117765043-4	10.4683172074314	0	1.3480216483457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166656378-4	9.48273397371397	0	1.35280870891795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99407745-8	30.3402736455824	0.587300263972013	0.364569313474347	1.61094267198476	0.107192218135266	0.952103103923513	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86020965307496	4.75592353211874
Merged-chr2-132604116-3	5.16964448689867	0	1.37805691735865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129790726-4	14.5696159185054	-0.314930038703935	0.719319922404738	-0.43781637195742	0.661519401842568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30279743853683	2.28521175839365
Merged-chr8-22838878-9	64.5631267815791	-0.280797681039234	0.296051721896604	-0.948475081449798	0.342887652567402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26852815874238	5.00443494815002
Merged-chr17-66770726-3	11.6800003464531	0.871574758346784	1.00365243173386	0.86840297576034	0.385173766384229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	1.41398715281163
Merged-chr12-35554514-3	6.03137374428166	0	1.39092850629818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117036491-4	11.8414789592752	0	1.35833351498393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91538223-8	44.3190193231313	0.615394617250275	0.312086589480414	1.97187139080482	0.0486242899796605	0.57875361922583	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50620617072728	6.19079638379891
Merged-chr16-33529909-4	19.1475271508246	0	1.36797005666982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58687941-4	8.26110424152727	0	1.35340259818162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-89858994-3	11.4828636963382	0.0941571656982865	0.862853095823355	0.109123054844509	0.913104888960509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	1.67285245412069
Merged-chr9-40765867-11	44.7258691812265	-0.36437857671235	0.267311943436772	-1.36312119850543	0.172844316884713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.09108601179366	5.7163163657554
Merged-chrX-140780419-1	3.07567212303928	0	1.43382195056926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9350041-4	12.8156910574686	0	1.36601136181516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37215760-4	10.0541848418546	0	1.35581402112477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122798218-1	9.51918044773046	0.87967541041451	0.659163973221116	1.33453199226867	0.18202956929137	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05071150134285	3.86142736642932
Merged-chr17-50079042-4	8.19662253876327	0	1.347102199058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43387023-1	3.30136609755214	1.34674168980914	1.08997765018669	1.23556816929087	0.216619122611414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	3.21345142839711
Merged-chr11-119952661-1	2.23332474066674	0	1.44288401651434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-36898626-1	1.83473901144784	0	1.54802407424341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47030930-1	2.5643696769078	0	1.41493301891802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27178353-1	6.20929770639696	0	1.39776788153929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16412456-3	8.37415232162666	0	1.37767107682156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103404659-1	1.97480453339499	0	1.43545432288191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94923431-4	22.6072183592376	0	1.35695656417442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91282762-1	1.73717062589613	0	1.47276580306327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113026250-1	1.91776880219484	0	1.55554766565886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67989791-1	4.90907992296834	0.270370383313489	1.00643358628714	0.268642051494842	0.788205148996319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13882690918841	2.04229173714305
Merged-chr2-18923289-1	2.25241133911345	0	1.55263152101808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132039736-2	4.62775204639387	0	1.36091523271417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4308838-2	3.81644770591425	0	1.46646861014735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-66910862-2	2.56493688051408	0	1.60332605778715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52346912-1	4.07298641186792	1.7964428400297	1.39325227319209	1.28938805598634	0.197263211682558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr9-85497059-6	19.7966700397045	1.06985474044391	0.562927546566592	1.90051943090931	0.0573649874963721	0.647988041590266	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30923017122179	3.77151331148448
Merged-chr9-96376060-8	34.6211977460245	0.482108463888074	0.270042414419548	1.78530644870865	0.0742116234362239	0.7593375376338	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21176552971199	5.74598172776854
Merged-chr5-136456582-4	13.656045509622	1.14297682425192	1.11223983028917	1.02763522140253	0.304121449747204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.18984215491549
Merged-chr2-154737132-4	15.4511558728536	-3.47337069186251	0.669224914841081	-5.19013954028792	2.10136543587003e-07	3.25436249938629e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00481055121196	1.86447591920152
Merged-chr11-115712520-4	11.1853170530581	0	1.34672164689449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93475212-2	6.90406620781731	1.73003732102564	1.26209430572617	1.37076707594385	0.170447577482029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.841757702988201
Merged-chr16-45350061-3	19.0156997243487	0.801542104593709	0.633972392181968	1.26431704988763	0.206116252340264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86840519849566	3.60379073292229
Merged-chr14-45075075-4	8.14918195854557	0	1.37145452043819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90898612-12	71.151521134047	-0.0810967223592402	0.226467469288709	-0.358094355069844	0.72027270333772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98328572726404	5.8612438419882
Merged-chr18-62478331-4	19.2315654600185	3.13996150593636	0.545287609569561	5.7583584347625	8.49358541944857e-09	2.01988585260852e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96617270997603	5.19631280468395
Merged-chr3-10419109-4	11.957257381614	0	1.35293862113314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112363373-8	48.7807159571775	-0.713118293452079	0.293090472362214	-2.43309953989489	0.0149701848104498	0.266633117991888	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3846599811258	4.67833435250784
Merged-chr7-80014397-2	7.65702999146896	-0.9112092606171	0.803463123788572	-1.1341021555793	0.256751699549447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81960882153758	1.7793972549831
Merged-chr11-20477696-8	73.8229242204055	0.811764303771052	0.297749927907118	2.72632913625517	0.00640431009304673	0.146396926975579	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60030795569887	5.36262496786311
Merged-chr7-63905500-6	54.394502599873	-0.0820105143369069	0.620825508611268	-0.132099137679373	0.89490587796801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85038486688018	3.08710614733081
Merged-chr11-115199133-10	44.6950782043215	0.56279851573847	0.280652861692532	2.00531899922346	0.0449289549590477	0.548953261995701	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02390200306634	5.54586296413228
Merged-chr16-51926851-4	8.38724401298743	0	1.38450583129291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64324202-4	10.0935330278639	0	1.35871321591186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113659865-3	11.2908406962523	0	1.35408180510211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142861159-4	9.47166196207623	0	1.37780723762007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134233364-4	8.61756879528012	0	1.34756136705879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79559375-6	12.6557411486531	0	1.36273297047719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31290471-8	33.8775082152687	-0.271943976355434	0.33275564006915	-0.817248285555493	0.413786553636567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04672654511627	4.73769503180068
Merged-chr18-81536936-2	4.84732652825008	0	1.37043333698242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155195195-4	6.34917947139693	0	1.35730278513758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44512177-4	12.2019711527448	-0.385433583545727	0.690926226189599	-0.557850561949807	0.57694643288182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1299791692323	2.28085562904052
Merged-chr4-11990072-4	10.8575443765383	0	1.3461839066028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130917766-4	8.1375395447186	0	1.34516911204647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29491203-3	6.37973866486816	0	1.36609873921792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-30578258-7	27.5433173633533	0.930531399289694	0.38966578424423	2.38802439658512	0.0169392172691337	0.288728862513552	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76332956825061	5.00630954979348
Merged-chr15-50826331-4	13.4560748876128	-0.0260642057566146	0.524003041973656	-0.0497405619220145	0.960329132708383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6947976263353	3.46718883835664
Merged-chr1-72415796-3	12.5357967602834	0	1.3586600986833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144998430-3	10.9612407969315	0	1.36090263885585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8877316-3	7.63950550766351	0	1.48372614941637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115493165-3	5.42088837973573	0	1.38850358341732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23453640-4	12.1274978661184	0	1.34169811436178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39606645-4	9.48751514173409	0	1.3658737082077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46836871-2	7.88874425783191	1.73429571645808	0.960275315328591	1.80604008951811	0.0709120777567099	0.737362998126058	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	2.55802334106756
Merged-chr5-74794915-2	8.21720990726411	0	1.40599957147795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3744196-8	62.5926247831147	1.16560954470545	0.331355339161606	3.5177026199568	0.000435299884911142	0.0195032090092025	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77687292728879	5.94085865626588
Merged-chr12-40789002-4	10.7168911985634	0	1.36155392710646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68392801-7	46.4213418779086	-0.518850152244558	0.366334183942851	-1.41633015696264	0.156678862303535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47650041077257	3.97124397516988
Merged-chr2-93471392-3	7.89977565766488	0	1.35465049862281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117829844-6	21.7146254813074	0	1.33793252298854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19072321-8	31.3098586824085	0.0270940322042121	0.29642847920331	0.0914015828608333	0.927173504074808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9193784321345	4.94569817595564
Merged-chr12-69364264-4	11.1238558968961	0	1.35999475346213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123662263-4	11.3872232931036	2.88543152931025	1.12599771287227	2.56255540870496	0.010390500666052	0.206618626402439	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.6567620950254
Merged-chr4-16214160-6	19.0426235239785	2.45132086389539	0.591318383110566	4.1455177682799	3.39046706646367e-05	0.00240254690682021	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00962323702219	4.36953734124544
Merged-chr3-27188400-3	10.6971550309363	0	1.34691341017267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98948535-3	7.20766329545974	0	1.35841328122976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79713859-8	44.720105139033	-0.158139963437743	0.294775528504886	-0.536475888076041	0.5916296958293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41018580692303	5.24327563750835
Merged-chr2-11426881-4	10.7250665386919	0	1.35266613226689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40577380-8	36.5459200507899	-0.657862686397379	0.388693500534277	-1.6924972645365	0.0905512012369012	0.855232123852926	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95511334455275	3.722190664346
Merged-chr8-69037905-8	31.4331870683491	-0.165838222515244	0.382138009987464	-0.433974685011535	0.664306824171497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47751895032339	4.43768711013811
Merged-chr2-71043525-2	7.25132529378874	0	1.39347113506115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67270185-4	7.90921522351907	0	1.35653180512806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59151153-2	3.18283698926943	0	1.44233849205435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61561980-2	6.82576563457814	0	1.39708557565713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95832808-4	6.89511497701624	0	1.3580946333189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151595069-4	15.5760420107987	0	1.3551299174095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69185189-2	4.79770273203661	0	1.38288337608027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38824042-4	10.960789887968	0	1.36229264206759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134567034-1	3.22168032828015	0	1.40545138822382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43454748-2	3.97636033643714	0	1.39086508321648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120558977-2	6.64321861548115	0	1.37141322417076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22668408-2	2.8037553508617	0	1.48119454713982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91841627-4	11.0099445626565	0	1.3443310893946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14131225-4	8.67465853935507	0	1.3527328728627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21935547-5	17.0908691837198	1.10947969956347	0.554756863845259	1.99993866118788	0.0455068877861502	0.554022153005004	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35287325867535	3.77651577324013
Merged-chr6-83502584-14	64.1075964884842	0.115474386325517	0.259324384749341	0.44528934846267	0.656110664399551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83544234810035	5.94965940421661
Merged-chr15-31564046-4	12.8930772090265	0	1.35426562639712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53238505-4	13.5736605360333	0	1.34855523683172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71527351-5	24.9906195927163	1.68944860845863	0.655032174610573	2.57918415910339	0.00990339748137415	0.200102661190325	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	3.32912104208964
Merged-chr2-71580965-6	24.4198419837565	0	1.34648936556268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126004195-4	12.7590203699198	0	1.37718962735825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73095283-4	7.99938902320552	0	1.34995461564797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31121226-4	11.7701595203517	0	1.37535427019973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156066459-6	65.5374856146475	2.7376848465397	0.316035093238727	8.66259762004248	4.61133805205503e-18	8.95241875613069e-15	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09857076999693	6.7633674643745
Merged-chr12-88408357-2	5.35684096962475	0	1.3793178955747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168553802-1	3.25946453020158	0	1.38479023210365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8065924-8	42.0498957460938	0.0926339481059779	0.332652954212637	0.278470240329701	0.780651406692941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66731296299671	4.78354592369914
Merged-chr18-49945712-6	36.6196092941702	0.894596781170093	0.687170924051707	1.30185482222583	0.192966018814505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	2.46364017180079
Merged-chr17-29164594-7	28.3481604305538	-0.899197307617947	0.328132392543058	-2.74034910314425	0.00613739567589582	0.142573799805992	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69800594755513	4.61553984322562
Merged-chr5-147059452-10	108.827149960051	-1.18889055438723	0.198935317722785	-5.97626689919353	2.28308842135574e-09	5.9666540142537e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	7.22039776626973	6.02482860047397
Merged-chr3-152895128-4	6.4880758445932	0	1.37169905365043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81848497-4	7.39763638842068	0	1.36080845358912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142278273-6	39.3079281403559	2.60071927283398	0.354981109128904	7.32635964549195	2.36488621140925e-13	1.81060351501402e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3955402233555	7.0819155745555
Merged-chrX-50620094-2	5.0969972005413	0	1.40507190136123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85959602-2	3.66805068320153	0	1.43120230685734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156667643-2	7.04593529915663	-0.545142172713944	0.793268468826417	-0.687210186887224	0.491950285868574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37475311282297	1.94207584056134
Merged-chr11-52072011-4	11.6872890274185	0	1.34318558210664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47521761-4	10.1005782557609	0	1.34429925391524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72803087-3	5.05911432702519	0	1.37268438902826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102663600-2	5.25209650568872	0	1.36553506096827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191351205-4	12.2906566357905	0	1.344878483763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31834852-5	25.8220567850276	2.26010288292448	0.468277948897893	4.82641321942173	1.39013926117576e-06	0.000169812539546636	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16123167027831	5.19277126108862
Merged-chr6-145276439-12	111.13148835254	-0.00845389942595814	0.20180365397011	-0.0418917064168238	0.966585027916383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.53769312580115	6.57472446763094
Merged-chrX-48423844-5	33.2932077350083	-3.92711755530146	1.02767485589407	-3.82136191498515	0.000132716718118241	0.00744514765757428	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9298561631795	0
Merged-chr1-37496189-4	11.0044256589338	0	1.35085670419726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46077054-4	17.1024952730676	-0.36759314323525	0.62581941656906	-0.587378936324014	0.556949237189681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43884655774859	2.18893016279325
Merged-chr9-22314178-4	11.9376771760498	0	1.34530412424966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81926073-2	3.53916016007698	0	1.38833983070088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135634081-4	10.513548323787	0	1.35663823776763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101138834-8	55.7333649102226	0.814707074709077	0.263063276206095	3.09700041168347	0.00195489602371514	0.0612601885793938	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29637235207023	6.06024858526719
Merged-chr12-21523147-3	16.0805270591225	-1.03593007402193	0.581455297887174	-1.78161602067463	0.0748118700692006	0.762839700823799	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6460552043594	2.14488513119751
Merged-chr13-109441616-4	11.9337824608634	0	1.36469366834986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32268879-4	7.68239792925879	0	1.34595724365751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53566047-3	15.647911585812	0	1.39099450278664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3710518-4	16.7143151311363	1.2486698185646	1.31819346653301	0.947258388291615	0.343507129149509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.716426531808663
Merged-chr12-102302489-4	12.4039745930703	0	1.34376435661174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40709508-6	32.6821754080889	-2.6939526507443	0.454711180626617	-5.92453576142968	3.13180854440524e-09	8.10676098406306e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62077147399793	2.39546146339908
Merged-chr6-129209352-4	9.34385631724083	0	1.38794885219145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35749367-3	5.93206367021968	0	1.37224650766738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134714158-4	8.37695625925544	0	1.36502336141755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21169885-8	29.7566291143204	-0.147476925879806	0.305572958676562	-0.48262426923681	0.629362543793642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89281519443159	4.92688416107742
Merged-chr7-100508813-8	35.5401439585118	0.100439501629943	0.328338127958982	0.305902644491201	0.759678772408316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65030918838505	4.67784722602396
Merged-chr15-51593002-2	7.35922116578803	-0.0384895342040067	1.03155496528833	-0.0373121505873888	0.970236117472077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.06702908365212
Merged-chr5-141013561-2	7.35046250908114	0	1.3865137691926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152802393-4	11.0686341542314	0	1.35909476497266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14186460-1	12.07609617567	0	1.35052335072769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99091068-1	5.11323517695312	0	1.36287950263727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102158836-1	2.32734634366285	0	1.60343327888093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41381660-5	15.4078384547805	0	1.34465643845075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142766253-1	1.7112028407504	0	1.44668137085309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4709293-2	3.13490199355567	0	1.4412937154539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144537687-2	2.22813324525328	0	1.65306290411265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106809900-1	2.82514265234911	-3.88885755027592	1.33579247803506	-2.91127373018031	0.00359958516233652	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30712077184164	0
Merged-chr18-20735562-3	7.95942129017981	0	1.36991101893126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95592976-1	4.61497871983776	0.0426266860575794	1.23187008196318	0.0346032318518907	0.972396124399636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93399614274172	2.16430979321169
Merged-chr11-77410068-4	7.55667399982494	0	1.35215415305456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60913196-3	11.5914707634099	0	1.34479227364863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8566580-9	181.517668164093	-0.180689358841352	0.185828279874815	-0.972345861260058	0.3308785155699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.66727124705795	7.45299042873763
Merged-chr10-53616432-2	5.24144393766662	0	1.35488580150479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90132633-4	10.7699975050318	-0.620452370815105	0.639679697661769	-0.969942258732072	0.332075274374383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56173046451715	2.46284082507861
Merged-chr3-95650309-2	10.1342361337951	0	1.34424181503825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17712541-8	38.4229227955187	-0.11079913183181	0.366234564389642	-0.302535977226685	0.762243511710811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43222440032807	5.21181950453837
Merged-chr1-183635334-4	23.6412511139417	3.82603534943985	0.666847230940325	5.73749904313876	9.60848224674134e-09	2.23208327542997e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	5.92104850004581
Merged-chr7-114892808-4	11.1619447790899	0	1.35081135408425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140783574-3	7.75707841629014	0	1.4008820722279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53203723-4	12.7056507427342	0	1.34369820809239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94195045-4	10.5658447906387	0	1.3559517706624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58273137-4	10.0311466119603	0	1.35348090557817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71002658-4	12.8578403764068	0	1.35277610391674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-57464794-4	15.3764736503483	-3.15694989862118	0.687532571352715	-4.59170958607809	4.39629844980214e-06	0.00045261058225908	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74217617421507	1.44790810950236
Merged-chr13-111797173-5	39.04506825418	-0.477950888030025	0.460916314493417	-1.03695806158506	0.299755402717323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66813819010782	3.01127223887018
Merged-chr9-42837717-4	8.30263924363981	0	1.37352356210144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72783383-6	21.2787222333764	-0.191645453501534	0.447006753262248	-0.428730555193872	0.668119321702462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72726427780117	3.31860745885204
Merged-chr3-69606632-6	20.8450036808807	0.559258690320168	0.583107935448747	0.959099776081377	0.337508483214556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22674752688732	2.96926124154442
Merged-chr4-150076364-8	48.7820133301138	0.176604501322691	0.351353255463014	0.502640856678448	0.615216798605817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74143360552612	4.94571941797857
Merged-chr5-66062575-8	46.2827586623799	0.50007196128815	0.318227215992514	1.57143052560254	0.116082680129427	0.996232776942776	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57196308659139	5.09643870205854
Merged-chr3-51720433-2	5.41344515483163	0	1.38027023037216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89224770-4	26.8812952205063	0	1.35510262566809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6454923-4	9.87714127296202	0	1.36707565528254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50876652-4	8.78506545447369	0	1.3512404914277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37337412-4	14.2212021888689	-0.481868731918753	0.846130337135838	-0.569497051187037	0.569018871321386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69969229296561	1.48018155595824
Merged-chr16-92787195-4	14.2003882551924	0	1.34907849301807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92948736-1	6.51755050769933	0.695432621690987	0.851990181372549	0.816244878046189	0.414360093899549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.76864270522655
Merged-chr11-109410733-4	24.0641725670987	0	1.34649339199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84761858-3	7.87634676125691	0	1.34790644318152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113222318-5	21.6279004149222	-1.61632676053769	0.583973732783393	-2.76780729988281	0.00564348132028487	0.134966212829258	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33285673048204	2.63003866658861
Merged-chr9-104663638-6	32.2436453129599	-1.66428744483702	0.458525102209768	-3.62965394220801	0.000283801438924444	0.01394860978164	C57BL6J_F1_Control-BALBCJ_F1_Control	5.94686586906242	3.45395137832002
Merged-chr2-163939818-5	25.2875706392745	0.716450874668426	0.428912513805175	1.67038930226657	0.0948423648203885	0.880390649459763	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81621041384363	4.747932444282
Merged-chr11-4222497-4	14.2056686365943	0	1.33978092845463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39268837-4	8.33114059971736	0	1.35155054188615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4661528-8	46.2881581586956	0.380792750493608	0.385791620534013	0.98704256449768	0.3236217725434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4825900204652	4.14247934998077
Merged-chr13-52603448-4	9.33464248314212	0	1.34637140622923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-37984503-4	7.49673850852777	0	1.35666467693786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64186025-4	9.74028773197989	1.98826808267005	1.04932135197114	1.89481332761895	0.0581171368902988	0.653136112898819	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.62518823153097
Merged-chr3-9878996-7	25.7313619625541	0.586454006829516	0.390209273841128	1.50292175543805	0.132859222182416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92982474596279	4.58152542442009
Merged-chr2-22933829-4	20.5628555853137	0	1.35434308706897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64368394-3	6.84863853050312	0	1.38828918583002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70945476-3	14.844732955869	2.13683479919002	0.893651263884541	2.3911282684272	0.016796683548736	0.28703266929448	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.82571227898612
Merged-chr12-117861029-1	4.22251326425007	2.08428631201209	1.10438311200598	1.8872855708797	0.0591219261298611	0.660055202812306	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.59128389355622
Merged-chr2-163744849-1	4.02980061859213	0	1.37245837396383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92438139-4	7.51768159221139	0	1.35163075751979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181234527-4	9.76713600881759	0	1.34590804149539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91399133-2	5.94295522614655	0	1.35091904386336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90853331-5	17.5895822867769	-1.45564557392332	0.507403504919077	-2.86881261128749	0.00412015819168153	0.107728561395679	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26352749619083	2.64634878228454
Merged-chr14-14870649-4	8.52663261832894	0	1.37000784104469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135476427-4	10.8274685620808	0	1.34374985038499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115003535-3	13.5744609849905	-3.56125402355011	0.887051004548411	-4.01471167417606	5.95185078885995e-05	0.00381079690261058	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12593329594568	0.577068348605183
Merged-chrX-20345203-3	5.91766393959893	0	1.36600024646563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67579359-8	40.1217797798269	-0.282414311968495	0.2897161928143	-0.974796435177218	0.329661245756649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14975511903622	4.81680001538551
Merged-chr11-119991437-4	10.5766863356419	0	1.34794040637619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98415716-7	36.0936804622345	-0.628588728349796	0.381337853776881	-1.64837747452573	0.0992752354240216	0.906931141644847	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19495710905499	3.82266031882105
Merged-chr12-113017606-4	8.36476628520142	0	1.35477202798266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120532058-7	42.6507738958913	0.9349398051169	0.456814248900382	2.04665201965008	0.0406922633683737	0.5135803910939	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61059527604734	4.28940325694265
Merged-chr3-15285061-8	63.543322379801	0.0773997006201825	0.275625552903633	0.280814677031211	0.778852545769337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53158551308937	5.63106944291012
Merged-chr6-89312620-2	3.71953930965822	0	1.40671723690723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100587803-4	9.98460991420562	0	1.35732247851598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120832462-4	14.1748329737763	0	1.35928124051472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45625974-2	3.87650233126301	0	1.38603473924024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53476999-2	4.46106883780141	0	1.43659009243743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148990056-1	3.88913320694963	0	1.36925178749184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118222534-4	8.25523352282588	0	1.37251451540825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-69994880-2	4.36894568293473	0	1.40577491167698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9113958-4	15.8110333169943	0	1.35935683253201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101697404-2	4.01235745372398	0	1.41197901798673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88544060-4	9.12023891545986	0	1.34915593125996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76241491-4	11.4303900691175	0	1.3510750776407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131244713-2	3.54290334381003	0	1.43029763002804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80597280-2	6.9789045271649	0	1.36927297683753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20208266-8	61.8889819492243	-0.140155451739786	0.270740504488044	-0.517674486884821	0.604685401863503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83165697678663	5.71663735733248
Merged-chr3-108855544-9	106.480598634352	0.560021657961733	0.208806101294312	2.68201769244465	0.00731795894256134	0.16141461985519	C57BL6J_F1_Control-BALBCJ_F1_Control	6.02018192938274	6.62621133558473
Merged-chr18-4920520-3	10.7612812235274	0	1.35467089873601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70447592-4	8.12599545024689	0	1.35106362372419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137807821-4	11.4571413022017	0	1.37279079223465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113873216-4	11.6615966909969	0	1.3621352515172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139726566-11	70.3547969454834	0.110264860900493	0.323652090668298	0.340689475148486	0.733337362792074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52274525793801	4.6640972052331
Merged-chr7-75700000-4	9.83397566639332	0	1.34388675144013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50818354-8	26.1275083014151	0.0421333438359712	0.418791091370222	0.100607068068514	0.919862385671627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99429884802295	4.86285196000965
Merged-chr15-97573160-3	6.15642889795634	0	1.38091894623171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47757849-3	6.76886095772696	0	1.39609192083452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5811745-6	16.1305090722313	0	1.33697811546389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123079884-4	13.6603735138093	0	1.34844249844692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155235070-8	32.9905795907448	-0.149739828789648	0.295893525557372	-0.506059835231555	0.612814645443214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28957395791685	5.09571327088332
Merged-chr1-179845045-4	9.29632838199453	0	1.34394286666286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123659429-2	4.32061822307198	0	1.37950867543468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96342680-4	8.5175166727997	0	1.35907872820501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92749632-3	11.9101765351243	0	1.39089188054998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57029852-1	3.07799749705255	0	1.49179340959098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95955343-3	20.2049312594	-0.966658912565327	0.55549795434043	-1.74016646688301	0.0818297919142197	0.804833644800287	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43074938566789	2.45914805170659
Merged-chr5-43186849-4	12.3144991007393	1.24068493961787	1.30660965775948	0.949545208279992	0.342343390447748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr2-38291754-3	10.4935374826525	0	1.43062187449495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145855950-3	17.6837418053476	-1.217215457961	1.10112151288552	-1.10543245565265	0.268972246912535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	0.55634759613363
Merged-chr3-32397605-3	12.7986414187937	0	1.35010636671986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29435696-8	50.3643094876195	0.335420133426763	0.272807075017238	1.22951405642823	0.218879130933998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06543824702652	5.44462501009445
Merged-chr14-79290116-2	12.2877953991442	0.95988054065215	0.804203498701948	1.19357916522557	0.232642627958035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	2.2259409611797
Merged-chr1-136618793-4	8.32482869272767	0	1.3489361105873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17775325-4	11.7398642915175	0.437469022881215	0.654153650177449	0.668755762140202	0.503651290316469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30670691456252	3.06332423133598
Merged-chr8-83662549-7	20.8587863303295	0.183443555062804	0.383741181502758	0.478039793238833	0.632621882606223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36037239227696	4.31594852294356
Merged-chr1-162207412-7	38.0221855297082	1.73355409306941	0.537165521312876	3.22722517415575	0.0012499705186353	0.0429459315594293	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05270361819948	3.96685759880778
Merged-chr8-115536975-3	7.3986012501897	0	1.39687547924908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89006541-8	33.3888865074299	-0.718244831215834	0.507435536009883	-1.41544054415977	0.156939369199434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67192559875271	3.33172595429083
Merged-chr14-31183797-4	15.204552189746	0	1.343798497544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12730587-4	13.1871642687462	0	1.34845970476758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62190170-4	14.2193634132206	0	1.36595389209226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105310847-4	11.317166271458	0	1.35839948935289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96880495-3	21.0250675831291	0	1.35056574462423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52049528-4	8.31351210219545	0	1.37095351461268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74974217-2	4.54341247645513	0	1.42682636883168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71224484-4	17.2798777465683	0	1.37178994847056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120511074-4	10.2297728233432	0	1.36949456172778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100163926-4	7.78277058923207	0	1.35530420417271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128666546-4	23.9943925542858	0	1.35869890245753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81052550-4	15.2959150479116	0	1.35611766499834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66087218-4	8.99276662167819	0	1.35261177505548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54771225-7	27.5053486768685	0.720024249694351	0.3163169593703	2.27627456690189	0.02282958135229	0.352790615654997	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81492116834217	5.59942752901589
Merged-chr3-107119501-4	13.718083444867	1.35231704698012	0.630013986164386	2.14648734262745	0.0318341175410073	0.439110353810728	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94985701881947	3.60064632065802
Merged-chr7-127008349-4	13.5826817340189	0	1.3683047875226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74775947-4	13.7581665149117	0	1.37881397836906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45005270-4	19.0970710921808	0	1.37288864607228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-28914451-6	47.8900362336928	2.43357745976199	0.374325456690191	6.50123419678648	7.96636962975343e-11	3.07123323903381e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58999369726385	6.11227214486552
Merged-chr17-17587715-9	38.1764010455893	-0.0785246702579639	0.410412864317167	-0.191330918412148	0.848266339129447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15177211895038	3.90858050274064
Merged-chr5-123391576-4	9.95929530287082	0	1.36174301959544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8624199-8	24.4439336543186	0.0378107738979036	0.404437451994305	0.0934897935674762	0.925514457735894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96544257970652	3.77218783124603
Merged-chr11-94226227-4	9.31670432377851	0	1.35228273890608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44686216-4	11.441369063193	0	1.35770770950518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85648496-4	16.2629591979059	-0.58666745472792	0.796257022359141	-0.736781514327809	0.46125522652561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61981563456346	1.35339221635894
Merged-chr19-41313919-6	21.0127734112959	0.0962343497526883	0.491079407050712	0.195964946546314	0.844637602606032	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73013530661968	3.51215248643468
Merged-chrX-61677994-3	7.52100790042562	0	1.36653693796631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125731908-4	9.18588425746954	0	1.34650279074816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84130178-4	8.16405304040643	0	1.36560428902612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66213742-6	21.8157978169289	0.0658554066570597	0.582281515700455	0.113098913294266	0.909952136531025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21915892870393	2.77255879782557
Merged-chr2-75733371-9	75.5980545334872	-0.0925622136679208	0.256492910259608	-0.360876304823531	0.718191917669593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59974143891974	5.49489640047133
Merged-chr14-120387526-1	3.43115405202989	0	1.43461842192884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38232404-4	16.0517586234479	0	1.34318956374457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87479219-2	3.49296178842624	0	1.40965732474605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54820887-3	14.6557770227016	0	1.34238800437758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51837506-3	7.01816514651096	0	1.39478776963959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22759793-4	10.4678929370059	0	1.35486149079285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20382164-4	14.3841257865983	0	1.34387753559916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-106683843-1	3.38302755643616	0	1.45310319750372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70040442-3	9.3279988770612	0	1.35518123762668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57598515-3	7.37906800428433	0	1.38018790628763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4563276-1	3.59626121222198	0	1.38158099151657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29477326-1	1.51206888547579	0	1.6870733287004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21955850-4	8.87472731301193	0	1.36095634086168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137869740-1	1.80992655511532	0	1.52227126399976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37336915-2	8.14110463488275	0	1.35582372392852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37038147-1	5.27194751724957	-2.37418449570721	0.97191184116011	-2.44279819954997	0.0145738839576338	0.261921329562178	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09440387543016	1.47418322843784
Merged-chr2-39011438-4	12.4011335359363	0	1.34914670073551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136896490-3	5.1416901595628	0	1.43705496486376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146776813-8	47.6131448348233	0.111281945565918	0.364881970529086	0.304980663759727	0.760380879284647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29295225809028	4.43935560979048
Merged-chr1-95653689-1	3.1671836739375	0	1.48266763112339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35234835-9	104.246960913683	-0.181932924163594	0.178610989322635	-1.01859871474626	0.30839351471425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.47656977167477	7.27612465760679
Merged-chr6-21998302-4	14.1856754423159	0	1.36533466469348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72944136-4	7.95589787336108	0	1.40040362437997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34828001-4	8.03547287389664	0	1.34925838584588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41349592-4	8.50669387230504	0	1.36131775348371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21045799-4	14.8685803982175	0	1.35181609631896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44334225-4	11.234614466511	0	1.34799871001504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6347512-2	7.99910876080335	2.93658194696461	1.21983052768074	2.40736879453897	0.016067934691839	0.278697148026062	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.737158151675
Merged-chr10-118882705-3	5.19473135907456	0	1.40231727176843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16580311-2	10.0055120268868	-0.830830599923896	0.69884882462811	-1.18885597377376	0.234496347370603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51587094645005	3.31569838778161
Merged-chr3-144585291-2	6.68149281294013	0	1.38629240367494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103929984-2	7.52965029724452	0	1.36810965755182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80768161-4	14.0637069886019	0	1.35259732703378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41951267-3	8.3066031758543	-1.36019610394154	0.764949789631124	-1.7781508307852	0.0753790859308773	0.765750650741274	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1500809081078	1.30139522650344
Merged-chr5-135907053-4	13.1036442505998	0	1.35072155567028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69635190-4	6.8589846797382	0	1.35587871803425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8000171-3	4.64394164989449	0	1.37666601654706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107405793-2	9.92684766583978	0	1.39343822478934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122638640-9	61.3991323313488	2.14249429428543	0.268101702046307	7.99134909600602	1.33470021516186e-15	1.64893111354508e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92346269346023	6.49217683606417
Merged-chr3-136253054-7	23.7442374539028	1.08083360643999	0.42627605445927	2.5355250315691	0.0112278903803093	0.217160461932435	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70227234460807	4.65850751822959
Merged-chr8-13649226-7	28.2758273132332	0.746734529704984	0.491627235177784	1.51890390985956	0.12878668473122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.425811750129	3.74598154703538
Merged-chr14-10209203-4	10.6567083403978	0	1.35664347637242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19160495-4	10.395088463582	0	1.38340373963514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24173411-4	11.1319888137141	0	1.36500447270325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52884426-4	11.986596849742	0	1.34393177815249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15938217-6	22.3350729227212	-0.498056451708947	0.55124566899042	-0.90351086589236	0.366254823992558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5626380367588	2.56783193607283
Merged-chr12-52502340-4	10.2584181648339	-0.0757317439424619	1.28394001364142	-0.0589838646181583	0.952964959903561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.465515277017237
Merged-chr6-13691888-5	23.7523866399451	0.749795815858233	0.487280608428079	1.53873518233571	0.123868959521691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92165786284952	3.68075797515313
Merged-chr1-131364581-3	6.11225391885767	0	1.40513028758819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54527912-6	106.69941564922	-3.03378684418661	0.289704402147128	-10.4720080941189	1.16152483443115e-25	7.01548094164919e-22	C57BL6J_F1_Control-BALBCJ_F1_Control	7.41731043583342	4.2231950172906
Merged-chr3-127572778-8	30.1824149189358	0.000506524272253422	0.306724381016303	0.00165139879188965	0.998682374999109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06361864617029	5.12272003262729
Merged-chr9-44462123-7	33.8648252532714	0.737638339021619	0.403920165730459	1.82619834711064	0.0678203902439678	0.71887353599947	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23698862574711	4.08977465011488
Merged-chr18-4803487-8	46.0503687433515	-0.948303056339877	0.360265199634843	-2.6322360785917	0.00848248983626248	0.180328378963391	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74708768781385	4.75837742899189
Merged-chr19-34673726-4	24.723321865514	-2.22047271375886	0.472842386533116	-4.69601029222312	2.65292179487516e-06	0.000291923432889916	C57BL6J_F1_Control-BALBCJ_F1_Control	5.58162229624134	2.99465368156034
Merged-chr5-34519575-4	9.40650981944849	0	1.3651082942503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96917937-11	63.3499644363886	-0.748938633786208	0.346087984448765	-2.16401223804139	0.0304634101816816	0.427675752599698	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69019026090785	3.88230390609606
Merged-chr7-114083945-3	7.06978450774643	0	1.40680354125534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-30873004-3	15.4906263746586	0	1.34318567049566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135307654-3	6.10434572732507	0	1.44255983022239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80812112-4	13.186901923287	0	1.34493847977502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6508055-3	15.7209886363059	-0.745498856194671	0.682097561600694	-1.09295047829403	0.274415543409671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87118672726048	2.78974526253627
Merged-chr4-123562514-6	14.0454004502411	0	1.36033781381678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35063125-4	16.6125683372937	0	1.35852052747493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70612058-8	56.4138161522132	0.492199068534366	0.289420724864772	1.70063518693881	0.0890115125177488	0.845461612607427	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70030863716736	5.1556717454665
Merged-chr1-20940144-6	20.8521637330382	-2.0409259536731	0.477508112578819	-4.27411786294252	1.91895512021493e-05	0.00151837673041868	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97631652381063	3.17162729894443
Merged-chr6-58937517-4	7.86364560753977	0	1.3557750685344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-26244023-4	10.5426160558323	0	1.37144008135125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86676910-5	17.7409578527362	1.15571879447577	0.750790754049813	1.53933541168661	0.123722433112626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	2.45903270513039
Merged-chr13-58448228-5	24.2277518124064	0	1.35287659805058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36349190-7	26.2143740304801	0	1.34378123332655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57565797-4	8.30536764009143	0	1.35495627738156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39458966-6	25.7639608411755	1.15558057302459	0.7452227552715	1.55065121784102	0.120985290869613	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	2.63003866658861
Merged-chr9-114815515-4	7.90041173228701	1.28784296165841	0.971442158439156	1.32570215372125	0.18493837376263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.4068548238317
Merged-chr15-57924267-3	15.0173745079934	0	1.36313667201125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132513578-4	9.50278964847549	0	1.37009215746076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-92882106-2	5.88288371128626	-1.9660169475578	1.16078748669051	-1.69369240287303	0.0903237488516375	0.853600254489945	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30889993389418	0.723581231604105
Merged-chr12-3391095-4	8.94484528982344	0	1.35432075218902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103214368-2	6.65817357565888	0	1.36514556786596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123150716-2	3.41488945380212	0	1.40307229476365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-27378279-2	6.28159417358447	0	1.41132948717762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123347054-2	2.79010279604819	0	1.51189173239501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25303205-5	30.7359942475202	-4.24935646304709	0.792692512309046	-5.3606617913787	8.29176268342632e-08	1.47298015590971e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85647294098901	0.67591700901439
Merged-chr10-25295241-4	16.6008424380796	2.2094401183113	0.502441145820799	4.39741079465518	1.09549885730809e-05	0.000948251948796341	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2825894645038	5.08708184717629
Merged-chr10-20772431-9	58.919370708899	0.482851708832544	0.282065758713907	1.71184092331565	0.0869259881472887	0.833791819156742	C57BL6J_F1_Control-BALBCJ_F1_Control	5.93562205166496	6.44231844276567
Merged-chr13-113613585-2	8.86896981091989	0	1.35829675107317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63098842-4	8.79574154762206	0	1.37072715718869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98113871-3	14.9826262719212	0	1.34345314148592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102990909-3	7.53972807972958	0	1.354029914635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35624810-4	15.5499867633758	-0.909901719980916	0.669478699955424	-1.35911974502176	0.174108646979928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71030984388805	2.14176814263789
Merged-chr10-39440364-4	7.32388864950247	0	1.36745383512425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3780844-4	9.75135038217059	0	1.35332695540698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128359224-8	30.7499127810962	0.294839534041772	0.450145234417946	0.654987571784495	0.512475755883493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91728915406861	4.1631102492033
Merged-chr13-23799581-4	9.94771048904609	0	1.35102750485518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32230790-4	11.058672567648	0	1.35335076758966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12475737-12	80.6351595549715	0.638922783468144	0.244540971487395	2.61274329443431	0.0089818737921778	0.186924072537899	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79726450821557	6.52359365150394
Merged-chr3-87566368-12	79.5814834377024	1.18685029942148	0.22150689963493	5.35807372762454	8.41139173862135e-08	1.48452871272636e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50120880851994	6.7369826959957
Merged-chr6-146192074-2	3.81712380458922	0	1.44372704941202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24707849-2	5.25792831737905	0	1.40952524681565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54481902-2	5.16531203924362	0	2.17201182730635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70889223-4	8.76394540267369	0	1.35306748891953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79136043-3	21.7125683907389	0	1.341189712648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102792098-1	3.15965689263394	0	1.40482610575176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88298245-8	79.6680320962879	-0.802420169605941	0.337796291066064	-2.37545583189665	0.0175272899377613	0.294616639816838	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15528399130747	4.41941147452551
Merged-chr6-124375578-3	16.2128379407619	0	1.37330931824356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67526045-8	49.874460710286	-0.937248718617561	0.281017509556149	-3.33519687117679	0.000852390295530473	0.0317798930553779	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90778484279312	5.02781235883571
Merged-chr11-21453889-6	16.8862694412429	-0.301375521876618	0.612206676081834	-0.492277418151404	0.622523241659378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3493545969995	2.2158378790404
Merged-chr18-5803220-8	56.9957401726423	-0.936622967350499	0.335643678869168	-2.79052765273613	0.00526222049074263	0.128100780858163	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34066689012217	4.23630243353559
Merged-chr9-75094934-4	10.9777084456086	0	1.34565608609201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129608780-9	36.4326614476867	-0.967533933177002	0.269508775943805	-3.58999045500003	0.000330690070434601	0.0157684048585566	C57BL6J_F1_Control-BALBCJ_F1_Control	6.13262605476291	5.14138898291491
Merged-chr11-117320177-4	11.8240053854057	0	1.37362179839226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122953710-8	65.3045467382914	1.08989679238056	0.249746598844746	4.36401055078267	1.27699414067381e-05	0.00107909961526451	C57BL6J_F1_Control-BALBCJ_F1_Control	5.288265027971	6.41751814341437
Merged-chr4-109257762-6	18.9067538787068	0.332826635654197	0.449992442099467	0.739627168183923	0.459526251889913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61587672272493	4.0392879091716
Merged-chr11-114929836-4	6.46233935654369	0	1.3691242734272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86516211-4	7.86861779937342	0	1.36190483107629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123481456-8	34.0217975454235	0.172624991078081	0.363971003953368	0.474282262056782	0.635298638761392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56930091327287	4.62841464003072
Merged-chr10-93425859-8	29.9766216980008	-0.171034155899577	0.2809625128408	-0.608743686729797	0.542694345110356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.58427722913253	5.40959932536946
Merged-chr12-102391502-4	6.61486755911494	0	1.39382112385022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32200835-3	8.2276084982268	0	1.36191584501451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119502185-5	21.1750779274597	-1.63521483922656	0.597389646327713	-2.73726678940386	0.00619520283025999	0.143322637920367	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13277591991967	1.8532292114115
Merged-chr19-40629114-2	11.3604592014077	0.208006240059307	0.615811701127163	0.337775718906574	0.735532209068299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47636644740223	3.02357027979545
Merged-chr13-51401364-4	11.8479853133259	0	1.35411944976647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34142931-8	25.7176186596161	-0.153733953320182	0.316619434880462	-0.485548063018379	0.627287627775296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89764574223183	4.72365109718964
Merged-chr15-36728030-4	8.22581901932386	0	1.3570669279908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31124200-4	8.95523541429678	0	1.34745441780748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27772075-2	6.28263743367896	0	1.38588322030383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79864399-4	16.5203731407898	0	1.36174780893728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76402748-4	10.4776030572728	0	1.34603150335076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34709755-3	7.53359012931865	0	1.37782954073413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13841565-2	6.27301698885513	-1.79975760141867	0.820913750093352	-2.19238330605865	0.0283518410172142	0.408692051406722	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58209634937421	0.88866493597531
Merged-chr3-89909245-4	13.1549542751047	0	1.35139240532544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93188002-4	12.2497212610696	0	1.35629476438742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27005841-4	7.93083000318654	0	1.35352857933384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167826129-4	9.36028530198348	0	1.37647258353062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3967746-4	10.2661975817774	0	1.35296520817336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35387102-8	36.2573319857502	-0.230797564109489	0.314534441073413	-0.733775173624374	0.463085773799365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04220220394923	4.76374760203793
Merged-chr13-112331405-3	13.7352397871868	-1.95272932997793	0.614621079382082	-3.17712716905371	0.00148741798791415	0.0490920184608532	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37386546324117	3.15263779641034
Merged-chr15-84968923-4	8.87505919416492	0	1.37196847248254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80180680-6	21.7647089557812	0.307314508806773	0.526235886627968	0.583986224839194	0.559229579891263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04002873292877	2.73073708876911
Merged-chr16-21716777-3	7.92998938290196	0	1.36841191554139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-77313680-1	1.49884389679819	0	1.68338640607931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27677177-1	1.29507160694149	0	1.67036292533622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123858749-1	2.21655300229328	0	1.43516823956664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139252647-8	33.4617778333506	0.5869238184124	0.309721130517198	1.89500734881184	0.0580914280875865	0.653136112898819	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07548194056893	5.60134252215608
Merged-chr15-27724846-1	5.15662116485596	0	1.37910745683309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105268887-4	8.18859295959687	0	1.44092725665187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107031750-3	6.99168797397855	0	1.38435197052891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-56802419-1	3.06602225192541	-2.04748639422081	2.20376150288187	-0.929087104726761	0.35284394677963	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0697710950776	1.46460328489499
Merged-chr16-77024183-1	3.32630902821391	0	1.43615520696353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-80723862-1	3.18971390205978	0	1.47304966662761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76948882-4	10.6286116723026	0	1.36459359742236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26858520-3	10.928500749218	0	1.35796345774781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86629632-2	2.55564159167071	0	1.48460164116357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60143263-1	2.71240752074794	0	1.45510348962209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117837614-1	3.21197247707768	-1.39652197938613	1.36492973253046	-1.02314569468503	0.306238964644597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.376242425970964
Merged-chr9-106426227-1	5.07209658909737	0.312678057566192	0.664780470931746	0.470347838479592	0.638106524455014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68165962282131	3.80955582906185
Merged-chr12-79711264-2	2.48969535628256	0	1.62661437006574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83244332-9	54.1690796104224	0.320637237980687	0.302559264348959	1.05975019033255	0.289258262601367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.37015015869176	6.72484056435113
Merged-chr7-18958181-4	10.9305898353232	0	1.35663564729229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84321517-4	19.6448762732539	0	1.35491217548038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89422803-4	7.22475488504756	0	1.34495710005212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172586618-7	46.491218322827	1.12694424683836	0.254627996894136	4.42584578516279	9.60651377085066e-06	0.000856066364048641	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2770692131339	6.41452242007044
Merged-chr14-70867984-4	23.1943602910046	-1.3965767029614	0.471092574207429	-2.96454832749384	0.00303127626649767	0.0858214305054932	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37765705156127	4.19166499740794
Merged-chr5-115521931-11	106.848378800923	0.0197516708398136	0.184045110044275	0.107319726316347	0.914535335582149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.90393813987852	6.93417421320508
Merged-chr7-122087753-4	8.3800332355901	0	1.38075001823446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90666977-8	52.5783084541226	0.107976177929419	0.370957936826104	0.291073912188691	0.77099479156055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64470579916904	4.71806275178832
Merged-chr2-131423754-3	8.47917556164134	0	1.39959474074915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62225019-12	42.8832057901121	0.334502100568326	0.28697258386679	1.16562389361765	0.243766543003281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22195102155666	5.46649103453612
Merged-chr17-28192897-3	9.7692482131041	0	1.36717465976048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85345111-4	8.07588747271858	0	1.34684675053982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17144342-9	32.5419305457675	-0.301084286962035	0.354254894360665	-0.849908615956912	0.395375894984234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29178788381437	4.73331502659208
Merged-chr3-154885703-5	32.3452329964059	3.35550320170359	0.597835085612974	5.61275723431841	1.99127874792149e-08	4.22827818196345e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	5.08292115053576
Merged-chr9-106296928-8	50.3728183808371	0.605383345973616	0.268121447830245	2.25786989766257	0.023953771843898	0.36371594515711	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28074710260363	5.92695448387997
Merged-chr7-141370761-4	8.746621826922	0	1.35623940939981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171815975-8	44.576348996813	-1.15276312994236	0.287001952279235	-4.01656894940142	5.90515923865581e-05	0.00379430911411455	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41245797546372	5.08924940437409
Merged-chr12-35462879-13	82.714537914517	-0.139574710326349	0.2377124438157	-0.587157778052891	0.557097746134139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.94798559396935	6.81947694034619
Merged-chr6-29485289-2	4.56748424947614	0	1.38830296799465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102192551-4	8.17514127449306	0	1.3538633918016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16110918-2	3.78832346843151	0	1.37823290913355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94169524-4	11.9254043459278	0	1.35544760872324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117159966-8	38.9338256549166	-0.330924896165517	0.377078755860811	-0.877601538198746	0.380159994246276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57439747975991	4.30328356425283
Merged-chr2-84113783-7	37.680641288989	-1.13488154756117	0.338867402107037	-3.34904313753583	0.000810911691827335	0.0306208513146454	C57BL6J_F1_Control-BALBCJ_F1_Control	6.38313666883371	5.18507018632748
Merged-chr3-79099246-1	4.68812450870618	0	1.38569756025431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64834674-4	8.66551550929923	0	1.34523848294189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121907455-4	8.36814346410309	-0.68476102934779	0.818666415552845	-0.836434738666263	0.402910376483707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69486619385668	1.30064958020929
Merged-chr13-90050037-4	12.6311185859582	-0.745004272376193	0.856076211578378	-0.870254613199218	0.384161276341388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06632714266925	1.44790810950236
Merged-chr7-7295693-8	27.4047811000289	-0.696063877423444	0.315418268751099	-2.20679632850537	0.0273282916884554	0.398588303700763	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31286580130716	4.58085659557031
Merged-chr18-67736989-8	34.9792442636262	-0.593603357896256	0.290224941830513	-2.04532165344669	0.0408231573033852	0.514396385687231	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78072807281487	5.28375964727906
Merged-chr18-62229942-2	6.17221285816316	1.84636380460657	1.0819731376076	1.70647841469443	0.0879190418393951	0.839928153839663	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.41478649953382
Merged-chr13-119329662-4	13.083862819995	0	1.35797214094687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70620307-4	7.21546502656924	0	1.35518799370195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108341278-4	9.46434159138206	-1.79839453018829	0.73737685240612	-2.43890830627512	0.0147317057456366	0.263507993625226	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77590606991911	1.62069611143677
Merged-chr4-62429858-2	6.42046822349362	0	1.39703490882974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130079943-4	5.79088422034529	0	1.35969440274016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88597217-4	7.45163004953424	0	1.35185992061561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34427429-4	15.2217852707715	0	1.36465307955294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30904815-2	4.1443950730549	0	1.38804193818162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157039211-10	102.368835785987	-0.00815428893696825	0.233207812075665	-0.0349657623575773	0.972107041850163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.58547235480128	6.57574512298018
Merged-chr1-123919918-8	53.9606769364881	0.196751621882981	0.313062776367915	0.628473382130093	0.529693878408575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8718699716515	5.04628534146054
Merged-chrX-167206010-4	11.1078224273787	0	1.34637858300603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69079508-4	14.570772307251	0	1.34576258765993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16307162-3	6.62394701191846	0	1.44496909672585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-84064822-1	2.4839128076533	0	1.41284575845607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52726291-1	3.00413562256616	0	1.52680279295528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3184357-3	11.4524427131033	0	1.36514375324099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82753760-4	6.79700689798624	0	1.38005585447822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181409826-4	7.18114052401175	0	1.34900734107183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70651549-2	6.06851349769256	0	1.40219934936077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29497254-2	4.79065827892541	0	1.76974013821343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3745939-2	5.67929084187601	0	1.39613860654457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82218949-2	7.34571448676381	0.493190253602743	0.735283399559328	0.670748522132178	0.502380746261289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77167105195599	3.1080788292638
Merged-chr6-53759782-8	30.677113465096	0.159340223888403	0.279816020389206	0.569446394337149	0.569053239602795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08374336814899	5.15872967776972
Merged-chr7-83855432-4	13.1462024271572	0	1.36640844128599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-105628793-6	28.9807211852087	3.25209354130667	0.662980177511968	4.9052651219696	9.33012284379966e-07	0.000120756225634787	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	4.55120291114553
Merged-chr8-84811072-8	29.7735484734047	-0.207945756957794	0.360000419990796	-0.577626428777809	0.563516359799525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23198467407335	4.96115394888804
Merged-chr5-64883641-4	9.49916807666293	0	1.35519137065548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26366099-5	18.064524570815	1.13220194804772	0.646353125684172	1.75167706793291	0.0798293522531379	0.793316957793112	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	2.88487504460561
Merged-chr5-64360786-6	24.0264726723642	-1.59941534827375	0.58674206692216	-2.72592581722275	0.00641214078653145	0.146514317366567	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92632376900248	0.988408630094828
Merged-chr11-116319200-3	8.28632246551678	0	1.37101349394369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19063583-5	17.2329793889272	0	1.36080845190855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166657370-3	6.22922291067842	0	1.39239747970177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91852963-4	10.4736415337332	0	1.35914730122913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26534929-8	28.1298017109788	0.0313470679139674	0.382376767928997	0.0819795305131828	0.934662990941384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6995011632066	4.71106553299951
Merged-chr11-22928991-4	14.6711286911549	0	1.35614272916609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-27030579-8	48.5949734968004	-0.249451678338824	0.303361646367561	-0.822291417935482	0.410911059917513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05628906169758	4.84859655881961
Merged-chr10-17793089-2	7.34878834342054	1.0557397229728	1.27108295826935	0.830582863301266	0.40620931889676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr8-90838645-3	13.2731989417487	-0.641839260306136	0.545654233059707	-1.17627468352455	0.239485128945518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39726049287154	2.84270764590581
Merged-chr16-20412780-4	12.0995272199859	0	1.35694491219889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-16427617-4	8.12581335720945	0	1.36766967441828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81599379-1	4.06067909790927	0	1.44140219757616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35079804-4	10.5910635152751	0	1.41098915241989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43554707-2	3.01911176013367	0	1.63261406985199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8507522-4	12.9217269998347	0.689319527672952	0.647064445732892	1.06530274104645	0.286738952793745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37850366884776	3.29330264741737
Merged-chr9-110527863-4	8.62365698247309	0	1.34551403270798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59809310-9	47.9530216386786	0.316833883580273	0.27378653925348	1.15722958639299	0.247178572928967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95105481472525	5.4315807722441
Merged-chr14-52141864-7	31.2325880810958	-0.0487595595519033	0.379239551020311	-0.128571926163081	0.897696381570945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81160239573244	4.69202175327825
Merged-chr12-116442782-7	27.6445678551383	2.1161314593849	0.632789237574298	3.34413313901603	0.000825401155305505	0.0309407648249327	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4944959016211	4.03916395610312
Merged-chr19-41016272-14	49.5868727346075	-0.384129150701098	0.307442441518966	-1.24943436177273	0.211506246997094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75324391623141	5.24883312577943
Merged-chr4-80310822-4	11.5570418084376	0.611705623352395	0.781705282778743	0.782527170825752	0.433904823712222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.17884592431967
Merged-chr18-23808928-4	13.3943917700576	0	1.34186467603575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30870163-4	8.24870467930032	0	1.35112259931909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17554297-8	35.8661570123265	0.0875444545959991	0.290213270403792	0.301655587541511	0.762914627927126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23049158820618	5.30697885121706
Merged-chr3-51182648-10	33.2144901114601	0.254373028599173	0.328952988551165	0.77328079528789	0.439356218925154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24540861027989	5.44076384660897
Merged-chr19-47531392-3	6.0623160784507	-0.0371445696972977	1.15745691322585	-0.0320915355663437	0.97439905357474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr5-8863635-7	13.5310739798214	0	1.36255064612572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101051459-4	11.5037623925562	0	1.36057313224017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44591279-2	7.40922326438808	0	1.39003858931449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55472701-5	18.7146233800538	0	1.34123617128666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10430810-5	30.6189424436152	0	1.33786327184567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57558436-4	13.607549687554	0	1.36869315421257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143048111-4	9.51162800434865	0	1.36284297001121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75268734-4	8.10029635655879	0	1.35401149415296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94264143-2	6.22930617649708	0	1.40814369666137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89977850-2	9.19947486986288	3.0773480709834	0.785365768955112	3.91836287323505	8.91524239273323e-05	0.00534436045123891	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	4.43579666042003
Merged-chr1-36988504-3	7.15862948482253	0	1.40322082790216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128439034-6	14.1254073943993	-0.423980295321438	1.04880130690671	-0.404252256866372	0.686027229809098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.841757702988201
Merged-chr4-41358869-3	7.4416017303925	0	1.36413415640759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35254904-4	8.57386832831039	-0.533906306520904	0.816982442551731	-0.653510135240265	0.513427457554095	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45327344926554	1.48198927919575
Merged-chr12-55499201-4	9.26728999500464	0	1.36312598237663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172525308-4	13.3757507843357	-0.934550099580541	0.982145945891554	-0.951538927070755	0.341330867530501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.724326877898254
Merged-chr2-148572963-4	10.4744465239472	0	1.35299399668152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116202955-4	7.52255083458821	0	1.35456607139225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127574278-4	12.0819932142978	0	1.36270022299649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-75674198-7	114.137035872378	-3.46731585753914	0.794085869444166	-4.36642432633406	1.26297015686675e-05	0.00107271554307999	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78988974151602	0.67591700901439
Merged-chr3-8098916-3	7.11999069761024	0	1.36502005009378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120307748-3	8.21185388283719	0	1.35649520771293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91032629-6	28.1517418364653	0.848578243650418	0.431933047353095	1.96460597041727	0.0494598604215854	0.585366547497706	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20708779896673	5.52060946385094
Merged-chr11-54113059-4	9.67917848655241	0	1.35286346215954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103360448-4	13.9366418941561	0	1.34799350985624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46963250-4	7.25274035835288	0	1.35626174266691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54209591-8	25.6553875888456	0.0760596448322123	0.382125317397837	0.199043720395593	0.842228544837168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04018742871657	4.21449311381548
Merged-chr16-22015782-3	7.45304462250727	0	1.38790842067233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6450905-3	10.9665189960028	0	1.35072557289134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8768807-3	6.76407345030813	0	1.35363694418815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120430292-4	14.9485492168798	3.70381157696935	1.06192553911544	3.48782606740443	0.000486964749841548	0.0210755707298063	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.20727117605912
Merged-chr16-29903609-3	5.97076803353487	0	1.37240795892024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58544237-3	8.01660947945568	0	1.35647742356741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103324175-4	7.08005941093079	0	1.34970400123004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-46611-1	3.92551456709822	0	1.75626049668679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21549712-7	26.8986865614484	0.0114248631560901	0.334082115462739	0.0341977694324206	0.972719445237252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42120574962847	4.56232333012257
Merged-chr18-9734983-5	28.2653201241092	1.56518317824119	0.456579901177722	3.42805974201644	0.000607911665303338	0.0247918012687482	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46801699129062	4.41216164192422
Merged-chr2-22965613-2	6.22009121234061	0	1.36756776091734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-19969678-4	17.5618023275657	0	1.3493764381837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136451085-4	7.40116280922915	0	1.36997320675015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17772478-11	122.567382223937	0.997552957496311	0.20688184541505	4.82184870061944	1.42233814791703e-06	0.000171872351653352	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89733210927879	6.99507708193341
Merged-chr17-14990259-1	3.11796988403236	0	1.38465404747766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52079401-4	7.67192509027879	0	1.35144763534166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69040337-8	27.3541599941476	0.107889531345574	0.359073444539367	0.300466472768486	0.763821366470182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49955403660158	4.84880750918591
Merged-chr12-73723239-2	5.01752617507135	0	1.37471425720118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42150095-4	14.9480051579158	0	1.36176145007574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117374993-11	35.9290382284323	-0.0105133813790264	0.343988695369692	-0.030563159547227	0.975617922837355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55040604528407	4.5574612140859
Merged-chr11-103051513-7	47.1196843486429	-0.87824633370378	0.388309828426796	-2.2617154380612	0.0237149902873181	0.362418655335487	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48701976827443	3.64134252198625
Merged-chr12-113130309-4	10.3601179792186	0	1.37129478403886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62069005-4	8.13866620812389	0	1.35097371598221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118736287-3	9.92991056071847	0	1.35962709661788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117363383-7	33.5388738148631	-1.0460849726946	0.364602714874905	-2.8691091152558	0.00411629767488925	0.107714209588193	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21142246017982	3.89215963324377
Merged-chr16-93085741-4	12.8493248837477	0.370480741149137	0.88273746817801	0.41969527124958	0.674708080014891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.28728541095094
Merged-chr10-8792552-4	8.48336456512769	0	1.34711120748496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44858294-4	8.07221937386567	0	1.37750686137301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10439557-4	13.41623337447	0	1.34825784313768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50182023-2	3.32568100745472	0	1.45312955717819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60580941-4	16.2877206792427	-0.364071917765536	0.491182032024947	-0.741215871160053	0.458562561750802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83980136857451	3.28508675036734
Merged-chr2-36235100-3	6.95167882020259	0	1.3644370031905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133814250-4	24.7646232978501	0	1.34318194227919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157041414-1	8.32569385471515	-1.44189174915053	0.682902758006429	-2.11141591133676	0.0347365786253509	0.466348648430588	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96005032236282	2.93619639428465
Merged-chr7-64007216-2	3.07842917872491	0	1.53382701256835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40921865-2	7.60769911559259	0	1.36240254395684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40562832-2	2.09838213032529	0	1.65601601498286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21845512-3	4.55656379784171	0	1.40858552989337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157017696-5	14.1809508843305	0.326643480042995	0.644013858757094	0.507199457902034	0.612014875349481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4627422823031	3.13454743179222
Merged-chr9-97572609-1	2.52598594456685	0	1.44639894355364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22357655-1	2.84593249755675	0	1.43225847150767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80037400-8	30.9379204532067	-0.425561221707826	0.337303076246426	-1.2616582879811	0.207071772384739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74933894093497	4.33510194434814
Merged-chr18-76152809-5	33.7276155960932	1.507928303778	0.49288562528941	3.059387870954	0.00221789795134767	0.0674665443409669	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75046767748772	5.44954665684304
Merged-chr13-32312889-6	25.0230611972635	0.609557133108991	0.446558978159976	1.36500924384197	0.172250144688008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53591887812794	4.13374745619804
Merged-chr4-132334929-4	18.1845945552808	0	1.35199134941339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78804019-5	13.2058932533603	0	1.35891792915637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34711630-4	8.57811202001475	0	1.37100337877004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81433310-4	8.9309966457856	0	1.36647371639186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30416269-12	68.6136170212833	0.0571298102601504	0.284119699888107	0.201076554292608	0.840638714537595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89189028237948	4.98143767764722
Merged-chr12-117560495-8	86.6929309179782	1.45598233446179	0.291607644205906	4.99294981935973	5.94640115157104e-07	8.16263687369319e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56917690628499	6.07807475827516
Merged-chr2-166665774-3	6.60946320285087	0	1.3836101717222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82377149-3	6.82776305137395	-0.10447972944276	1.28975615449408	-0.0810073509466932	0.935436106510271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	0.662147012823607
Merged-chr9-40732551-5	21.4535913508732	-2.19337496382789	0.538795590114154	-4.07088514470428	4.68348383288619e-05	0.00313533864127907	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06224920250368	2.60112659139651
Merged-chr11-77372448-4	12.9978807418753	0	1.34201752922283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25157392-8	32.9039577643351	-0.533583086440157	0.32178808098582	-1.65818163558292	0.0972808103226605	0.895295804054899	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64860961108011	5.06387831874142
Merged-chr3-136432091-3	12.4231741184487	-0.0676051131488322	1.15616221526481	-0.058473726485991	0.953371289903534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.67591700901439
Merged-chrUn_JH584304-12755-1	2.64418549676696	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7842653-1	5.06384789094647	-0.966200716565459	0.855362754311963	-1.12958006611201	0.258653214470394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62798987719808	1.94842033677601
Merged-chr10-17589370-4	11.2737857716576	0	1.37463679028546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97821096-4	11.7934535288019	0	1.35236634138491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27439294-4	10.0915411272516	0	1.3532836102988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4349150-4	9.55567336662339	0	1.35443128046182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169928742-11	53.5201365951424	0.00204335117626515	0.271713119416435	0.00752025217131107	0.993999763455642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20806441099268	5.24141852833588
Merged-chr10-98897737-4	7.17717743537582	0	1.36113366411853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92675824-8	41.1413760534057	0.24106231983041	0.294691510506315	0.818015827521586	0.413348149703856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94079800388525	5.15079335958519
Merged-chr17-37246897-8	28.2398217396422	-0.379910218315288	0.316730709624094	-1.19947389618827	0.23034372899238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01702561803795	4.63515238068252
Merged-chr10-86887026-4	7.24930294167595	0	1.35795806962798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152604393-3	5.74647708569078	0	1.37889981235559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193833467-4	12.1924276021611	0	1.36570416668239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173062191-3	9.20058587207707	0	1.36415729364309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32495467-4	15.2923760401805	0	1.35398092536307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152810014-4	11.3919789348605	0	1.35016642697754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40595367-4	9.46238412928837	0	1.35121874404357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80223353-4	9.34230610660057	0	1.35345757969201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23888099-4	19.1712607146825	0	1.34480007854628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27919738-4	7.21224601425356	0	1.35114176157234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54814800-4	12.1586976281248	0	1.35216558723389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153544111-9	56.5830597272834	-0.414590779320658	0.263343116218879	-1.57433687758168	0.115409588443472	0.992336257228518	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84025076423389	5.42888348488772
Merged-chr9-85567500-3	17.7577772321232	4.07876941487805	1.01925367788889	4.00172155701819	6.28832740902205e-05	0.00398864865375764	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	3.47267517821214
Merged-chrX-166945594-4	7.44360371092909	0	1.37007520583385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62970514-4	11.6076410622965	0	1.37090478365373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20662571-4	9.47826016326803	0	1.36272406203888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20886549-3	13.4431495493981	0	1.35009900140299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46875781-6	23.3952965979458	-0.678416404563045	0.564019766099305	-1.20282381104282	0.229044508453626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67093622417774	2.59621076100161
Merged-chr3-57696442-4	10.1181423845007	0	1.34751123867107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73038706-4	7.39602729767466	0	1.36957219393716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109254133-7	28.3836071237342	1.39073358160287	0.419709157279281	3.3135650187338	0.000921146875244802	0.0336735864098401	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37364205008586	4.71707123540801
Merged-chr16-24137491-4	8.35500349188281	0	1.35478227458072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70949507-10	69.0474783176464	0.239528429968028	0.343738209702493	0.696833878826974	0.485906761430435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7159044459322	4.70554914771708
Merged-chr18-61323256-4	9.41295266658168	1.63764756138256	0.891284871104233	1.83740082938201	0.0661507444852225	0.708055947520591	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.28358877055452
Merged-chr1-182928625-2	8.50093465818785	0	1.38268322643856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46601507-2	4.60524249218427	0	1.36515530333922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83535948-3	11.0004245056843	-1.65320069153362	0.660851830862681	-2.50162080866981	0.0123626255962337	0.233625451173492	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10858244405268	1.93887912158102
Merged-chr12-33170324-8	55.4923869188433	1.45656231365257	0.368104747024382	3.95692347199232	7.59212398284069e-05	0.00465801656414489	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65646728526731	5.24258986962035
Merged-chr11-89035727-6	34.0584030509197	2.28570713172062	0.429938867716996	5.31635379666387	1.05867211417624e-07	1.80969677529894e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58038544897122	5.47115744989822
Merged-chr1-80822365-4	5.77925588946046	0	1.38732981394322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94708493-4	7.90931312816348	0	1.3537666985093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108083574-3	9.29060625335268	0	1.35138243444322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77763280-3	14.5400432603982	0	1.34649333517961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84601235-3	10.8067145872479	0	1.36033350443897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24933504-3	6.19328537982651	0	1.3563430117359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79374600-4	7.67049292309126	0	1.3666393700783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90214189-8	38.8095681993022	1.09961195881924	0.355003181433303	3.09747071668379	0.00195179678632633	0.0612219974079128	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99103093936721	5.07666741196873
Merged-chr17-86937970-7	27.4977064562657	0.135553644531504	0.465449001511487	0.291232001983698	0.770873888772444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47968115910761	3.56353894226189
Merged-chr11-93729343-4	16.046498850987	0	1.3429037111667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59457373-2	6.61723993732188	0	1.37145515708684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90107145-4	7.69994507741654	0	1.35615047246724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84267015-4	18.6058659780803	1.99410141543561	0.622402262718811	3.20387880134764	0.00135589541960433	0.0458650398968711	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85412670560938	4.85793782179324
Merged-chr5-64281850-2	3.10023327915701	0	1.45187894200977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124753890-4	15.5778449468477	0	1.35891472338345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59003866-4	6.31956663570227	0	1.37408294009096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102229947-5	18.6720394183568	0	1.34610419951806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71235313-4	14.2620830384791	0	1.38352852380193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171551573-2	4.35773771206085	0	1.41101940822843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60902690-4	10.0247806748432	0	1.34665335588713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38415792-6	16.5845152713294	0	1.34734328441449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17185265-8	54.0124108807375	-0.980859936637529	0.30630719928326	-3.20220986947967	0.00136377600598919	0.0460170700866333	C57BL6J_F1_Control-BALBCJ_F1_Control	6.27126388572659	5.22474961014818
Merged-chr19-5713692-4	7.79855401113056	0	1.367098324386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86602331-4	10.1062602508275	0	1.34394761741776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9902557-4	7.65973020388964	0	1.34859010967464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86891724-3	8.6219463098914	0	1.38601224459221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106497159-3	10.5040774120751	-0.0583807762097101	0.829702209570692	-0.070363529874071	0.943904318217508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.66683653681755
Merged-chr13-59073775-6	16.0110114436835	0.175757700918184	0.595878247578747	0.294955725657626	0.768027701589691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64492808120042	2.46148502957325
Merged-chr1-165734476-4	9.06792708853634	0	1.36018525465322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108817411-2	3.39692112544305	0	1.4419525883491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-110933620-2	13.0622055508823	0.739200755140291	0.814667548945211	0.907364919711568	0.364213854000034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	2.13795322910058
Merged-chr2-167300246-5	14.5305585984832	0	1.37720732021912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131560887-8	35.403596322405	-0.958424381755984	0.486336274410859	-1.97070305503534	0.0487578509058676	0.579835488381549	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82929659222791	2.47481144691616
Merged-chr1-161351102-7	32.6206292812182	-0.609154438290673	0.41505961052766	-1.46763120968639	0.14220442564908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69238863894177	4.18528687391504
Merged-chr10-57791512-4	8.26127765989471	0	1.34652377146477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81669269-4	12.8435920344707	0	1.35790966438952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53284637-8	42.3023228549567	0.18418699674279	0.291781686190224	0.631249339695402	0.527877505613168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75265245076069	4.97162773773732
Merged-chr4-67473226-1	2.79198728686608	0	1.54717636230663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112875777-4	8.3825942246913	0	1.34827078160434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12960083-3	9.76584762082824	0	1.36558794112966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72362032-6	19.8487963308563	0	1.33762562336564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83699539-4	10.1777998798314	1.21903394957713	1.3384221727606	0.91079927872293	0.362401142603307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr18-50058660-9	61.2423340836908	0.581312481449084	0.262270692026488	2.21645993670683	0.0266600187588761	0.392815194600926	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5490348574434	6.24214041992082
Merged-chr12-24593225-7	51.127924117927	-0.699524333286743	0.51493563087994	-1.35846946945849	0.17431476388053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26227033524096	3.63101660032782
Merged-chr6-125271703-8	60.2399864565873	0.334249892694908	0.314438114700214	1.06300692272495	0.287778811942807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60905464960766	4.97025271657422
Merged-chr4-128733692-11	90.3162728970935	-0.134519807115185	0.231573008598401	-0.580895882164198	0.561310627816048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.94473603002964	5.80337678980363
Merged-chr4-19951248-2	12.1017030032155	0.872187287501986	0.670483706354509	1.30083293484365	0.193315645965416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17129981640246	3.2518108032293
Merged-chr3-86961310-2	13.5332615427824	-0.560771981801492	0.566006930472456	-0.990751087329276	0.321807138520184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85253147590983	3.55331011446481
Merged-chr4-8645701-1	4.47784960945491	0	1.38360607634851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46506520-4	10.7227373800013	0	1.36121246916993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30698074-4	9.49331627728026	0	1.37517108480079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13624152-4	11.4818363956111	0	1.35136625936649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133755145-2	4.666737508148	0	1.38595732594967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100898706-4	10.7120577323337	0	1.34428889374231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97442516-4	8.82494060653435	0	1.38026994799142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67888240-8	47.5393475475604	0.529656509842292	0.329610172759424	1.60691797042586	0.108072363754846	0.956571401738133	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54529185106394	5.11246285313036
Merged-chr12-91185758-2	4.47423213476301	0	1.45446393847441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45377511-6	41.6581276429581	-2.09775467450583	0.494962900819544	-4.23820587569782	2.25313111726368e-05	0.0017323614484206	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89295204926836	3.0388078486119
Merged-chr6-135184026-7	77.0401718970536	2.60561272169833	0.244851514470751	10.6416034523225	1.90816932059098e-26	1.29657720122506e-22	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97995350396956	7.56332665632847
Merged-chr16-77084875-4	7.04265824994503	0	1.35240492797406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71286399-7	38.0107451088495	-0.414913371618038	0.403628696269554	-1.02795806010024	0.30396955641832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70934047694996	3.78804217924698
Merged-chr18-5821571-3	8.26070827620329	0	1.35655050266475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67359308-4	7.8094797764173	0	1.34994827686496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99248122-3	8.387801453886	0	1.35435747314095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9111940-4	25.0104978260062	0	1.36153649480801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60089343-4	10.5525944428083	0	1.35658787082142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113978467-4	12.0397766615756	0	1.36761851419267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21009688-7	27.9822133493805	-1.06351091262495	0.422735720383742	-2.51578199178329	0.0118768623110135	0.226477798730887	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19128056248286	2.64463819182123
Merged-chr16-97481005-4	8.29516004933568	0	1.36743065681961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37338048-4	7.63600868326319	0	1.34922694570983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150598406-4	8.35101934584614	0	1.35372784942206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74797602-3	10.0118412912639	0	1.37362705312523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89486136-6	25.2575206843642	-1.25346242210938	0.607721803343687	-2.06255957119331	0.039154492220705	0.500740787632971	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28599728195999	1.92218463282547
Merged-chr7-106651947-12	58.1197111540053	0.919031673722787	0.271271317594816	3.38786894932806	0.000704379109562061	0.0277459014613653	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79095425421246	6.76860612178044
Merged-chr6-103649159-4	44.197923950342	0	1.42201677293485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32196148-5	50.7296733524213	0.266727951457491	0.549286543376318	0.485589815869118	0.627258018496651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26292282237182	3.01905864107165
Merged-chr3-52017946-4	19.1384838616829	0	1.38641021289467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134350883-4	8.01430438806729	0	1.36205310737073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59659947-3	8.75368900685708	0	1.3499904449881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109870091-1	2.70318707361846	-2.07078852589124	1.38926826174597	-1.49056059431515	0.136076896576138	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	0.465515277017237
Merged-chr7-64061311-4	10.4589171627482	0	1.37316655782771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105733551-2	6.09890404271938	0.466131272588912	1.21430878813146	0.383865518511302	0.701078124305571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.859510663435501
Merged-chr12-85304933-4	11.6761129488629	0	1.3445542343064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137969446-1	2.64170429743148	0	1.42528630848538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80971830-2	3.73647672841008	0	1.38867612087118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94913567-4	15.1883651573832	0	1.34560720664398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-77253041-2	2.19067887895672	0	1.55054711818643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55922385-1	2.66302034499621	0	1.47317451004655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123108582-1	2.78429013798277	0	1.4687092544664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58303263-1	2.65778857733733	0.982092781811473	1.43570669481146	0.68404834034743	0.493944641263913	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	1.13341594473881
Merged-chr19-12474778-1	3.72321765936177	0.274162477668562	1.090476195607	0.251415371351552	0.80149298467725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	1.56608458088645
Merged-chr6-17291739-1	1.5329707752088	0	1.82761395349607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31761871-1	2.60952621976039	0	1.45226111992278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117897351-2	5.80759605418153	0.0811336562940306	0.871748849040527	0.0930699895770769	0.9258479587759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83015051550866	1.47418322843784
Merged-chr2-167944478-1	2.27867585507158	0	1.46986785205195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34772851-2	2.61582116406133	0	1.95658557008534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136355066-1	4.4727222317839	-1.36493104283837	1.29246362500326	-1.05606921265187	0.290936594927489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41455337443306	1.68067998093129
Merged-chr2-28389991-2	3.37614610034787	0	1.41683649114665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4_GL456216_random-34969-1	2.62320151049952	0	2.0171153153275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89753745-1	2.60543402342124	0	1.44087607811818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125380048-1	2.65155141774645	0	1.50726028337524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-13551437-1	1.96718652647582	0	1.53239224317235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125696440-1	4.02207823663781	0	1.39444422290795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93070731-8	74.5634527437545	0.428415436465494	0.343329812186233	1.24782474827181	0.212095243468309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52348716064593	4.91108868209322
Merged-chr9-115236365-6	26.9941348310955	1.61424277006248	0.503202672007187	3.20793759624436	0.00133690503626017	0.0453921429519468	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44575596919856	4.11762334196404
Merged-chr3-38105652-4	9.74256108821436	0	1.35144092678732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182369653-4	7.99521580797417	0	1.36462094972087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12473920-4	8.17924173965098	0	1.36518445120017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7923660-4	8.66386848908396	0	1.35959352986849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136170305-3	6.26696522663762	0	1.37901738984429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30840925-4	7.67730022055334	0	1.36553343512055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91084628-12	74.9962092192438	-0.184008697277846	0.224338960111685	-0.820226220119054	0.412087157215332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0128520456448	5.8326889970364
Merged-chr19-8807043-3	10.5759326952586	0	1.34454162353385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12473469-8	34.2932290627307	-0.881342277871751	0.338708193904168	-2.60206955052618	0.00926630579284464	0.190509499467943	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43144878535481	4.56410099579148
Merged-chr5-125384664-2	5.12553245965832	0	1.48084260499625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84119350-4	9.89050066617322	0	1.3488480911298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94267103-4	7.46769852279859	0	1.36769246757394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109923520-7	37.7000684116699	2.73510735975993	0.67647213801172	4.04319292114369	5.27282001818962e-05	0.00346584308789322	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19454903376793	4.08508153629099
Merged-chr13-105300886-4	9.05722751605086	0	1.35521610641932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-44049542-3	8.48445372426895	0	1.35973943187984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41006467-5	41.1737273472625	-1.13614187782974	0.329621008443764	-3.44681269920807	0.000567241695522479	0.0236452904591753	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60677386980641	4.33330295038948
Merged-chr2-68436441-4	13.4015998512517	0	1.34748677763638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100907447-4	10.508825557981	0	1.3587094427331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107819348-3	7.65244399841187	0	1.36531302139217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50855178-4	11.2097138152123	0	1.34382199435122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70977786-4	15.9615779543743	0	1.34990012197273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38342455-4	9.66940932728856	0	1.34869220826461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32672563-2	9.39963712206394	0	1.35677668394913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46933845-4	9.71034676977816	0	1.35122133575133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87982978-5	22.5114038027554	1.0624240240433	0.484198461998173	2.19419124063081	0.0282216640270973	0.407247527169892	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17799977121877	4.19269217356565
Merged-chr17-50410078-4	9.23870933497559	0	1.34574567656643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122464100-4	6.90304267794753	0	1.38366919780321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19893986-2	4.29644628728929	0	1.44007800593294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25969530-2	8.14790258092309	0.622459950134946	1.38749007911291	0.448622991620174	0.653703645248667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr18-36025745-2	4.24445537136416	0	1.41752341292389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31115729-4	12.5964199057676	0	1.34756145155025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29785979-2	4.37799704997104	0	1.42147968129479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13563621-4	13.4459002765066	0	1.41217941599457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32560489-2	5.9189415195067	0	1.43557452096466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85249553-4	11.0282370133832	0	1.35259197655783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82795512-7	29.5866174182031	-1.48015498229675	0.487081112553251	-3.0388264791009	0.00237501607905004	0.0710531089934405	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21515779620621	2.49434621444282
Merged-chr19-41442652-4	14.2367320554138	0	1.35079185873699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19087171-6	33.5397666647892	0.152177703512919	0.529743866129731	0.287266570210085	0.773908217483803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4134144825228	3.10999898042929
Merged-chr2-128342456-2	6.62460524455297	0	1.36028115675971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96510787-4	15.6418644797382	0	1.34413914077064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5339431-7	100.748343083367	4.04847527741697	0.316093628150457	12.8078357703874	1.48210822515567e-37	2.68553070037457e-33	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61688700504587	7.96299126896473
Merged-chr16-87638292-8	33.8039607233941	-0.99601686932585	0.373781578715973	-2.66470293358865	0.00770563584919911	0.167749563126397	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89953115557621	3.5093685874529
Merged-chr12-34595218-3	10.959875525842	-1.06912662258125	1.00164840852002	-1.06736716545172	0.285806069334249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.723581231604105
Merged-chr8-71521781-8	46.847279375008	0.00544844539840155	0.311955090361472	0.0174654800217822	0.986065271595752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89028965298904	4.64631110055258
Merged-chr16-93026411-3	5.98237174620188	0	1.37039592447199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25139555-7	32.0886116119531	0.0862503309532617	0.36658168721926	0.235282704947761	0.813989317832597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9157679785575	5.18499232361
Merged-chr16-91601955-4	16.5669231014947	0	1.34001156418055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102690245-4	14.3144717539773	0	1.35063770619776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112811020-4	19.4852293356614	0.536230791738416	0.634557927655543	0.845046241435498	0.398085021534974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	2.9462120107287
Merged-chr2-69635909-2	8.26926113321537	0	1.37198810716891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29149077-2	5.03649535121991	0	1.39042569311935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10553167-4	12.1248228391978	0	1.36963490549632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50491685-4	9.73849379377373	0	1.36408358029543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167102123-2	3.64106847479708	0	1.39285308232264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32200218-2	6.04294407539604	0	1.36643135540921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34467687-4	12.063671476427	0	1.35323926906436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127492868-5	37.3489494382594	2.66194704555384	0.328649935918174	8.09964267334164	5.51208482454076e-16	7.49078547443028e-13	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34376130351226	6.4082608491477
Merged-chr4-47349906-4	8.52184314664378	0	1.3511353330258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102672166-8	49.2098591777273	-3.45685967949339	0.543797008492535	-6.35689352002171	2.05874593275885e-10	6.9081092690641e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67221398743944	1.92460482503279
Merged-chr3-61442380-6	15.9755352854447	0	1.34351081912747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46817892-6	33.5073949061351	-0.179014629385616	0.323942409462665	-0.552612514312513	0.580528770906283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.88691887633948	5.69279594693815
Merged-chr3-61404331-4	13.7337035952234	0	1.34714477365692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85510943-7	24.3278109120654	-0.655285118684259	0.409204109329398	-1.60136495148628	0.109296110785354	0.962277300582393	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30367269952353	3.43175031311599
Merged-chr2-131091024-5	42.8568119113811	0.741033608618399	0.520740258707085	1.42303883025727	0.154724899081026	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47310746003418	4.19315789742215
Merged-chr10-105286459-4	9.23199261869975	1.27383106723803	1.35856682483983	0.937628568538181	0.348435324511973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr6-39778685-4	9.26258719325864	0	1.36467665815709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132747911-13	103.734199515449	0.127224820993169	0.21935139463753	0.580004614073246	0.561911506255376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.93424159668659	7.05327347016466
Merged-chr2-160057639-4	7.64575623627618	0	1.35519586275663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44539080-4	21.1696615795554	0	1.34528176275352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-51012484-4	9.73350535223125	0	1.34663953732572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-71353913-1	4.9419262661316	0	1.43120930302279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126738156-4	8.24931985046738	0	1.35907657461805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12433283-8	26.325682441231	-0.697175562126723	0.369069970272328	-1.88900647108269	0.0588909616175568	0.658017221494095	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78765246372808	4.16205046261301
Merged-chr1-131090363-5	24.7877246984917	0.23650205405164	0.667817233216541	0.354141885366641	0.723232553499582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79795952835561	2.1512909918148
Merged-chr10-121454296-5	25.7548819149078	-1.63308779448906	0.452428288537396	-3.60960584442781	0.000306662625738576	0.0148838157790386	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99300080482371	3.45583624514549
Merged-chr7-30332125-4	15.8368869447567	0.177148799298695	0.495306799252438	0.357654689105953	0.720601745803967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40149498438235	3.50410213637434
Merged-chr17-50361885-2	6.3584293648016	0	1.3709043551691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91489071-4	10.602440736297	0	1.36036440407652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21035039-4	8.91266883451526	0	1.35281974624996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29986462-4	8.44194916733763	0	1.370577337409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136236524-4	13.0519036942426	0	1.35775548346008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144906659-4	14.8204401116404	0	1.3581200798619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53704601-3	15.7072770550542	1.39060745341221	0.777087420202605	1.7895122443877	0.0735323573328669	0.755453141771399	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	2.54635642558252
Merged-chr8-4193469-4	8.31322504155339	0	1.35468830031618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41268008-3	11.1755671082688	0	1.36138639155341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84770326-6	34.3369866648876	-0.402956276803336	0.376375206205812	-1.07062386193151	0.28433858978312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70886446442219	5.38389250009692
Merged-chr2-117087711-4	8.57140745482143	0	1.35375769224868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119053872-6	22.0130225218004	-0.145583184798416	0.406028246485598	-0.358554327336878	0.719928519243608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33865464176626	4.28279607396495
Merged-chr18-88924545-1	3.95005354496853	0	1.41898319939862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112871785-4	18.2619796243462	1.02523493261042	1.2466824873905	0.822370525759446	0.410866048944002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.577068348605183
Merged-chr1-43811961-4	10.1003907845995	0	1.3462707114914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110525901-4	15.8395677481053	0	1.3420807522216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191963541-3	8.10311588246446	0	1.39302326687275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16573377-4	9.96948115363867	0	1.3439339507375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31769584-7	26.0893185592235	0	1.34056169173779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172247734-4	14.5995352303092	0	1.35504405396648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124752009-4	9.04378921705137	0	1.34796879800768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118976498-6	20.5422141005968	-1.09463738661596	0.519553645302322	-2.10688038956786	0.0351279488791488	0.46929128822611	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94870620507401	2.68556215926332
Merged-chr12-79612897-4	6.52634371358844	0	1.38355220740077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105485186-3	5.92414008862849	0	1.38083835209883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99168586-4	7.81168522418648	0	1.36265912126857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51365442-4	8.48716440336914	0	1.34742035629129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88225966-4	8.82773590970582	0	1.35299832372895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11459222-4	14.7299091215518	0	1.36970709942149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45561287-1	5.51793794552836	1.33263944973463	0.819657499213354	1.62584915164395	0.103981749336739	0.933674531949764	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	3.16166899267271
Merged-chr3-115818907-4	9.27840354862905	0	1.35839489656506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135236881-2	6.86752217957896	0	1.39041172080762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75068995-4	14.6167694036725	0	1.34628285485114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14323330-4	19.6573951025023	0	1.33945260275218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17741710-8	25.7664497045176	0.659516515275156	0.356799636570865	1.84842260943325	0.0645412304472615	0.697494382879262	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22818590047637	4.84382948560806
Merged-chr6-127582138-4	8.12370235768616	0	1.35792273867142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65549649-4	18.2731853026638	-1.27675966859609	0.487844794551895	-2.61714316285539	0.00886691436867809	0.18524081405341	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74927476471381	2.88213041718607
Merged-chr1-128615676-6	25.6198922839356	-1.17791040409978	0.420714778316904	-2.7997837604186	0.00511368496525664	0.125420113288812	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10122894146198	3.62483447749749
Merged-chr1-86218223-1	2.24025864335555	0	1.62453341118164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159586401-1	1.70571088122097	0	1.54029340209682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35252187-1	1.73695987962286	0	1.57229762077306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94645479-2	4.85505435657207	0	1.37536212912964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59052233-4	8.63846404046503	0	1.36999764664739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26331435-1	2.84507285630865	0	1.45540955108117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71415694-1	2.67635192427081	0	1.42188811724393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-25793243-4	8.26159175837255	0	1.35733312438403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81396808-1	2.06291019719415	0	1.42622450859809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65669058-3	12.9975043858936	-1.19671868142951	0.469947924094052	-2.54649211130468	0.0108811670902747	0.212536601458944	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92306072269272	3.7459836651985
Merged-chr14-79494434-4	11.6730948044698	0	1.34205790631748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145773091-1	1.97509696797221	0	1.56446064830211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12091037-4	6.11707914999302	0	1.38130022509791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53881372-4	10.7756491197619	0	1.34929002526476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148676393-8	48.5749627226535	0.270578493974401	0.317909844645541	0.851117065204717	0.394704326640991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25691112743623	5.5247505171709
Merged-chr3-51654474-3	5.65463697564615	0	1.38867248950328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5017043-4	11.7499434848642	0	1.3792208614307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59456806-4	10.9222208884738	0	1.35586228671644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3188416-3	11.7121562271443	0	1.38818046093953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53860192-4	6.90691005985121	0	1.3682637017802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17555017-3	13.936407258663	-0.723722698206721	0.925220859400168	-0.782216149640118	0.434087555049039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	1.28067447403188
Merged-chr1-180401315-4	10.6047114127446	0	1.3721650714572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79356391-4	12.2574081576553	0	1.3602249243557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84618790-4	12.0190845738409	0	1.34100879171331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113421665-4	7.75434058434425	0	1.36697261288376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23813514-7	42.8028824672164	0.357354045124668	0.3699692702469	0.96590196500965	0.334093238995243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0806373838041	4.45679563903972
Merged-chr5-43948315-2	11.4966670515148	0.0921531220551297	0.782921258511177	0.117704202119087	0.906302037119566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98088044523647	1.61141823534019
Merged-chr8-34816341-6	19.8878580234721	0.638809460671633	0.432098521508131	1.47838844354762	0.139303836827443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98090716127875	4.54219383437563
Merged-chr17-84116405-3	6.32671941813022	0	1.41303621753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92700391-3	6.67304150725117	0	1.38718844616807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9705949-4	7.97280206649239	0	1.36551087339322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157139066-4	8.43240782261951	0	1.35393080334956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19952538-4	8.74392625415037	0	1.36879418333875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166733099-4	9.26242426667674	0	1.35387895794887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153609788-4	7.23407741425687	0	1.36493122170046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116814722-6	53.8647262098173	-2.22114156084834	0.281830441672814	-7.88112720423202	3.24440806564397e-15	3.59924036817022e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	7.28407339830101	5.08909248538877
Merged-chr1-60158626-6	18.6661633776213	-0.726530654969219	0.494694300030979	-1.46864569679441	0.141928913454952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66787678648267	2.87659445644239
Merged-chr19-41597729-7	42.7463689762911	1.55992945534465	0.40732154677724	3.8297248640219	0.000128286611428242	0.00723503171061484	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40333148886017	4.89517358728484
Merged-chr6-143074184-2	8.36046963731003	0	1.36664415590523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79809362-7	27.7236944749472	0.194599917283143	0.298246596934107	0.652479925281886	0.514091619006249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43215168637046	5.6189503462538
Merged-chr13-22051048-9	53.1917521302376	-0.146547438591971	0.342034163223898	-0.428458482657592	0.668317354116044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35831347537675	4.20201433322288
Merged-chr5-67327445-4	10.061169933194	0.23795078802041	0.972736471152888	0.244619992235297	0.806750682716741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.17858215524007
Merged-chr8-111923683-4	8.1454371318599	0	1.3546378153709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86593232-2	10.0839343631444	0	1.3894987752998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20827649-8	39.0956177661653	-0.663819387993794	0.379668019226646	-1.74842060531183	0.0803912224704339	0.796425453302409	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50920843016181	3.92523522749167
Merged-chr1-180391020-4	5.70339607253961	0	1.39395988892939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-54211929-3	7.25991653795565	0	1.36446124685662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18733771-4	15.1962404893535	0	1.35949404642018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97820861-8	57.7693167698552	-0.0714358367344913	0.358849466608309	-0.199069089915814	0.842208699970188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31370018762929	4.48178559111176
Merged-chr14-21890587-8	62.7274378523576	0.730121073508493	0.306500002587511	2.3821242001459	0.017213090864165	0.291491092300668	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54176319076494	5.23994229017288
Merged-chr19-53479652-2	5.32689830305686	-2.00822627846552	1.12464069827093	-1.78566032827466	0.0741542724614865	0.759124688650461	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96353301543917	0.55634759613363
Merged-chr4-155116715-2	6.28304353238114	0	1.4133069953394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61498392-4	7.63702625381787	0	1.35516021753655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67729438-3	6.45079179744215	0	1.36165553946188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-78237299-3	8.60437997916498	0	1.35828404148476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179847931-4	8.37382009577698	0	1.35170960512346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20085767-4	8.62315274638524	0	1.35858877267756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63817728-4	10.3245409630893	0	1.36936084016741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67712023-2	6.23059655908025	0	1.38109440129014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52304096-4	7.41459748903834	0	1.3620579442604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33583982-4	9.50172368610645	0	1.34856522233126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51185606-8	40.1703791228684	1.00859231224966	0.29829501736405	3.38119061177188	0.000721724582130558	0.0280631091273498	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8945543668201	5.90445537770349
Merged-chr7-128221177-4	15.6698992020387	0	1.35585985936562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80322674-4	13.6493478637618	0	1.34865987157545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11589062-4	13.6172004238213	0	1.3511512691695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39446164-4	12.6515668485791	0	1.36378171960298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108764998-4	11.0736505338822	0	1.35249492115461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145002440-3	19.45802632801	-1.13124017972613	0.707556102286515	-1.59879926986772	0.109865211348635	0.9646524024714	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29398433573242	1.54671377011021
Merged-chr16-57176498-4	8.47657917817854	0	1.35980105540918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79742174-4	11.0697150073356	-0.0149602149993113	1.00260014278469	-0.0149214171840827	0.98809487338197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.15786140276852
Merged-chr4-129678106-3	12.5730055694513	-1.83709931909643	0.828166570857665	-2.21827272887131	0.0265362424439514	0.391872752787491	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85496198186545	1.31096605903064
Merged-chrX-155191901-2	9.32355935110071	-3.23310217409859	0.858362252764558	-3.76659407340621	0.000165489744112413	0.00887023746538763	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75384802253899	0.724326877898254
Merged-chr6-87521411-2	7.30460554044956	-0.434794054434298	0.780691864406371	-0.556934271071096	0.577572338342046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06632714266925	1.8538004573626
Merged-chr6-51534006-4	11.720164551074	0	1.34882683176756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57759192-4	8.5152505371425	0	1.35522562245039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33282112-2	4.11567105958648	0	1.36952272942105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65562278-8	50.1077836698976	-0.713457883825323	0.305076952504809	-2.33861613592091	0.019355308947192	0.313232826839466	C57BL6J_F1_Control-BALBCJ_F1_Control	6.09516019149526	5.37235494538858
Merged-chr7-122329778-4	9.41998622401888	0	1.35921668428351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117866326-3	8.85457362073328	0	1.35896464935246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136656378-9	105.859458369794	-1.31795908926905	0.247679102557338	-5.32123653413168	1.03064292548542e-07	1.76734128663919e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	7.10368498773739	5.70690238978273
Merged-chr18-5760474-2	4.40634958578407	-2.6518068170591	1.14914623851751	-2.30763216044647	0.0210196041895364	0.331400894478479	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85375318208663	0.303163067301871
Merged-chr5-19901853-4	10.6832800515769	0	1.3622982179258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16889681-4	11.8431785958731	0	1.35146798606864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118610810-4	10.7165688625492	0	1.35171108653453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70803798-6	29.858240841297	0.333323527843451	0.608416257655946	0.547854406665021	0.583791877208896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69442907999601	2.81423103972428
Merged-chr12-12230362-10	90.5905916564026	0.195363098461241	0.200879278630555	0.972539824879303	0.330782062485553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.66073198751318	6.85602583761341
Merged-chr4-141834085-3	9.12567321565966	0.130167788006013	0.799622420486713	0.162786566098013	0.870686485876334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4306872510886	2.49921595638724
Merged-chr4-6335740-8	66.9234143910481	-0.305351410833729	0.327674471598663	-0.931874275539306	0.351401503378154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3815132275586	3.96544048528253
Merged-chr2-71505054-4	15.114223558287	0	1.36682367640474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12585393-2	2.48429662469337	0	1.88326267859278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70737567-2	3.69897101578761	0	1.37167101531145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38185256-2	7.66674641813425	0	1.354420601167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41597340-5	40.5957077690084	2.22888437993459	0.425586551660068	5.23720585446244	1.63025827602216e-07	2.62527961812503e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26426741654096	5.33048032354644
Merged-chr1-189799105-8	30.2555104057048	-0.0283412569805449	0.308846111932192	-0.0917649790157218	0.926884769318569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0383236492897	4.99503049199661
Merged-chr18-36491758-8	28.7326743987729	0.0586952854575344	0.398664014761239	0.147229956264518	0.882950516559783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48687759903646	4.41795004256451
Merged-chr1-64929247-4	7.71900503937947	0	1.35968040336315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58507836-3	13.032374454238	0	1.34255529434709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99267525-8	30.0674081948833	-0.0949491233801048	0.33506864660691	-0.283372151771322	0.776891573528898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50830139428078	5.35439125648505
Merged-chr3-102715412-5	18.5123757809241	0	1.33975445896568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30794874-5	21.7223228475903	0	1.34625855968806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3691187-3	8.05801665483908	0	1.38634826417582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122564666-4	9.27639336265454	0	1.3767883264942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56335501-2	6.33704961272174	-1.38922043296922	1.06947807185721	-1.29897046935873	0.193954063778203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	0.577068348605183
Merged-chr15-59430540-2	3.83087664637067	0	1.37217637846338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116492116-2	4.97773833378687	0	1.36321419239631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91582471-1	2.35396209818748	0	1.44345206596569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70185297-1	3.15613293085642	0	1.47310320698881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95641364-4	8.46374784546487	0	1.36599760168885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83145715-8	33.149878370571	-0.581686910570618	0.397811647004081	-1.46221689322397	0.143681783787325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37301447465374	3.64808850264792
Merged-chr3-27622531-4	11.5988429481395	0	1.35616687102448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3868793-4	8.7211877779065	0	1.36095842197704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106371975-10	73.8249529446042	0.0887977808242545	0.2244341961655	0.395651742655002	0.692361960178182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89604335199763	5.99713624399115
Merged-chr2-90542237-6	23.6553960392329	0.887433201642946	0.695130666129258	1.27664228451393	0.201728566264039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42629324027793	2.47629065811305
Merged-chr15-74923649-8	29.5320895171027	-0.50753129966377	0.307025982566182	-1.65305651144482	0.0983193629521124	0.901119920875717	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21903068098787	4.82220115153606
Merged-chr7-96546106-8	51.9080592544094	-0.150363818351166	0.28128170433835	-0.534566649846147	0.592949550132658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.74895470275841	6.57481125535672
Merged-chr8-83859786-4	23.8295253364108	2.68684434861725	0.707157586220563	3.79949872697713	0.000144989057014736	0.00796107085885257	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	4.05402192056932
Merged-chr2-117996369-12	51.7947097555462	-0.119689950332802	0.228383535595701	-0.524074338461441	0.600226836148096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.23363520972278	6.02572347671301
Merged-chr2-101763196-7	79.2705154146116	0.219395901887174	0.368696287792948	0.595058613691229	0.551804291744543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89563038508891	4.46926858624612
Merged-chr10-7271755-6	29.3416784355601	-0.641508847241649	0.611112145942339	-1.04973997244391	0.293837680454885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21542127395646	2.1881845164991
Merged-chr6-129727444-2	4.94549225779743	3.13002375813514	1.12752953320751	2.77600157330786	0.00550319421572411	0.132710031595149	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.86501351763573
Merged-chr11-35308670-4	14.521011820612	0	1.35744072368374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26514181-4	12.1350660763066	1.64689199975921	0.790041681792388	2.08456343217596	0.0371089467298929	0.484322985663925	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	2.493612465944
Merged-chr3-152428757-4	12.0956535711525	0	1.36101985282282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74997458-3	6.7351699539216	0	1.35088609971618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17558165-3	5.13415647244597	0	1.38172185516188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21452762-8	33.5021619689803	-1.14354539978716	0.322961616523641	-3.54080900416676	0.00039890222779531	0.018174336247817	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64219433852886	4.59103732692952
Merged-chr2-152927603-4	12.8025259563435	-0.00537817872366301	1.14921400219641	-0.00467987573540184	0.996266013034074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.723581231604105
Merged-chr1-88562555-3	6.65150142785331	0	1.35324797467292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59464845-3	7.17158775354916	0	1.36583469696252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160157470-3	18.3666084772264	-3.18194949304149	0.583095600900924	-5.45699451020579	4.84261320675453e-08	9.10863706941072e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25004720653969	1.8079825392299
Merged-chr11-118270413-4	10.8447984407887	0	1.35366890831804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79414079-7	31.8257296802881	0.289472152360822	0.355486560759388	0.814298441388202	0.415474002398672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78754737574804	5.11693518991902
Merged-chr1-44162611-1	2.28411307601474	0	1.46727042206562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135688157-4	11.4171947758211	0	1.34982852248903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100275612-2	2.68644824383883	0	1.49224340473173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35579069-6	22.5397173482326	-0.384373963449485	0.544708295443658	-0.70565101847112	0.480405188552723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59616019259371	2.41979064294981
Merged-chr2-31075363-2	7.01980650106956	0	1.36387219222571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120112067-1	5.54678118636296	0	1.39634100242248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6370780-4	13.9750498079401	0	1.37347135338445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54840062-2	2.84971843194689	0	1.6382538772271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23885731-3	10.4233792211881	0	1.35263452424545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94703570-4	8.80420515003793	0.928223062506065	1.01445691958567	0.914995052609207	0.36019422739135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.948471875794396
Merged-chr14-54900568-8	36.3571224532158	0.760352211353219	0.286569818417733	2.65328782895362	0.00797118663634359	0.172220150960071	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23254611364921	5.996871118785
Merged-chr13-76566173-1	3.97759641733162	-1.34898020483904	1.37526739451931	-0.980885760990894	0.326649079986918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr3-122638853-7	31.9896317038143	-0.206724113092447	0.299860123907924	-0.68940181307977	0.490570442779442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.94170748427375	5.71093606269869
Merged-chr13-118420620-6	35.7900097090136	2.03381205903126	0.405911474139047	5.01048181341769	5.42939294137264e-07	7.50983132061261e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35929691274935	6.38335918492843
Merged-chr2-19274224-4	5.48947421082584	0	1.38061373283815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64357640-4	18.2577818676904	0	1.36720044681903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11512304-3	10.932499030773	0	1.36297817208977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35546911-4	8.50397616426823	0	1.37868722095868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159647734-4	11.2788569554012	0	1.34938934384327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9629877-4	6.36180120269543	0	1.38742711964062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85353055-4	21.3545764499429	2.42245245448033	0.614433814836457	3.94257672020397	8.06108515419979e-05	0.00490148241495689	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72011176107421	4.24649558305017
Merged-chr1-95646171-2	5.63016854624593	0	1.385758885277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113747383-4	7.98168240885736	0	1.34739661571412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84176356-4	15.2239673554778	0	1.34819589992887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120515741-4	8.37981976044904	0	1.3497920481808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135667046-6	19.5564205152729	-0.761880480611472	0.493133988347714	-1.54497661612053	0.12235191961682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84907297492187	3.40253180008891
Merged-chr17-10370737-6	19.512273332027	0	1.3398023103177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67039653-12	56.8204424043002	-0.990532268369373	0.320327496937196	-3.09224864502837	0.00198646383546191	0.0619874785487222	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16732601992349	3.98246850299363
Merged-chr2-160084929-8	30.995382450313	0.215389997301877	0.351099962270382	0.613472003554375	0.539564288932345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77401455214011	5.26084889164201
Merged-chr2-167293013-4	7.70181139980585	0	1.37256732838042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102831739-4	6.19654491110606	0	1.40514909657008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43723641-3	7.93308586419898	1.2364639814944	1.32939831989144	0.930092932263802	0.352322969859293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr19-9938971-6	72.4862428115861	0.0806710388085551	0.393411034965728	0.205055353405587	0.837528877990861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75846123796229	3.74850794292976
Merged-chr6-58606905-3	6.05348955956018	0	1.36434266852446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166031218-4	9.31105452333859	-0.0349530720951088	1.12158365442596	-0.0311640348512375	0.975138722005047	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr3-105789983-3	8.20080519823628	2.46152345741606	1.17471920836201	2.09541432530785	0.036134177178209	0.476173996904306	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.837303648891292
Merged-chr10-97389723-3	6.32100804750644	0	1.37042822629789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89584824-5	39.1059996497651	1.75038473166837	0.422495163138642	4.1429698713355	3.42836999425916e-05	0.00242344297162462	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28047910283328	5.30940956462272
Merged-chr18-46621699-2	6.72518409837449	0	1.37842683917921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82374631-10	66.0071359921376	-0.0434041492356024	0.248429369815099	-0.174714242796281	0.861304175781741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05267658173466	5.97748809456252
Merged-chr6-120478626-4	23.7103898447951	0	1.37158032541474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58284641-4	7.99988844728739	0	1.35795000163545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86170387-4	9.47930655977031	0	1.35788381471086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3146756-2	4.36020835043479	0	1.39058012175169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58362771-4	8.17727277791424	0	1.34527616190639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111788504-4	13.8463143310288	0	1.33905565032153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80067761-4	15.9387631938385	0	1.3388833250933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120815439-4	9.8102227891095	0	1.34929209862902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-98329778-4	11.0892460758512	0.567144269084236	0.701867471294792	0.808050368879438	0.419061586956296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40343015234056	2.66320599947928
Merged-chr2-143867582-6	12.6594636996933	0	1.35195583935523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138458303-4	10.1898204858321	0	1.36031554938756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17711879-16	82.1801749918419	0.500216657369673	0.198210671165366	2.52366158909954	0.0116139670741035	0.222532124138594	C57BL6J_F1_Control-BALBCJ_F1_Control	6.28265426860674	6.7606980413577
Merged-chr9-77825474-6	30.9421669047788	1.47988844434871	0.467577703563982	3.16501072029027	0.00155077237300686	0.0507821900146266	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91649491165338	4.32680999106535
Merged-chr11-114858840-1	3.49500111267301	0	1.3961681318174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59206156-3	4.68561420957477	0	1.41950841420192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32657522-1	4.73723346494989	0.671902917081615	1.03466499937075	0.649391752393523	0.516085193594722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	0.921168194051549
Merged-chr16-25846785-3	5.52677286777712	0	1.40080117261344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47644971-2	11.0568886508665	1.67865806723482	0.629053996934133	2.66854367894683	0.00761808723718188	0.166738722667581	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96006934525357	4.57025285149635
Merged-chr2-156414803-3	18.2844263732598	1.52554515375572	0.671771223148721	2.27092959803368	0.0231512401645571	0.356105903821493	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51789747318134	2.93328653765623
Merged-chr14-54386168-4	19.1892612597445	-0.219973376718345	0.522576583449872	-0.420939980253527	0.673798909928189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48910686631238	3.33172595429083
Merged-chr1-60658584-5	18.951473683806	0.370828890336532	0.536488990952134	0.691214352187178	0.489430845843143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59548068020203	3.2288125165499
Merged-chr4-46507466-4	11.4281227489433	0	1.35436956523394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39562826-4	7.01372000537319	0	1.35408624813962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171617138-5	54.1881278586072	0.0504848160437161	0.472710583818547	0.10679857352865	0.914948779163184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23217575633447	2.83399538572189
Merged-chr4-136120221-9	46.7469100351779	0.31016770659775	0.333944584308857	0.928799930203042	0.352992780653742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34656755407434	4.44459779938081
Merged-chr8-68247170-5	17.2575047643117	0.187221202305539	0.730468687901461	0.256302844196375	0.797717001239293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60978507060531	1.72367253454767
Merged-chr5-107646048-10	51.0295681198043	-0.857440231384439	0.255173504715507	-3.36022437886096	0.000778791945074545	0.0295630945127844	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30180176984267	5.29495998662082
Merged-chr1-177981520-3	8.28669971082025	0	1.35978150965019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60822343-3	11.0768343272368	0	1.3420128723817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154864386-12	55.623863567017	0.250962833792433	0.281746248953201	0.890740638872243	0.373068327553959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84066597468631	6.11650309404307
Merged-chr10-25434536-4	8.77867582151488	0	1.35174613520347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132865278-2	3.8260757837312	0	1.45080876005999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165927995-4	13.3265859249655	0	1.34369023832902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133615120-2	8.56062324804199	-1.42486741079246	0.663490487119001	-2.14753253958395	0.031750909533288	0.43848136549009	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99699765796785	1.51436894928421
Merged-chr5-139456837-4	7.54431938120088	0	1.36771174640045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7086073-2	4.08238541120738	0	1.41914750951682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44526859-4	12.4908163092268	0	1.38180338181067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43396977-4	8.3498757620014	0	1.35000130727119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150078785-4	8.29764743080644	0	1.37002423187799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118026036-8	36.4017833888746	-0.66562143080727	0.301950776792389	-2.20440377030369	0.0274959607609022	0.399932420471608	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50365980896454	4.84318675073763
Merged-chr15-31418260-4	10.5472782985657	0	1.35564226350012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115767548-4	8.73918701575132	0	1.35785797397838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64753660-4	17.4876154228161	0	1.36960901079724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78591930-5	39.2761061663625	0.558448566637237	0.694112691098924	0.804550289597929	0.421079237986419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	1.73208132761692
Merged-chr12-103341847-3	7.04807099457758	0	1.3559367226336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13599523-4	8.31961014474396	0	1.35898793623057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36053890-6	43.0918551441748	-2.42968365857516	0.375998626653609	-6.46194822624585	1.03363466997959e-10	3.74582313502805e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	6.61681891514585	3.96746401606304
Merged-chr4-95850469-10	48.8025523490524	-0.0115633344621126	0.322935699720332	-0.035806925255172	0.971436311054617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51379420215263	4.61266482949952
Merged-chr1-155322378-2	4.07030724292033	0	1.37445867970346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75429188-4	8.59623135444138	0	1.35991033662257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6774855-4	8.63577960613951	0	1.35721018942982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172456146-8	55.9360675136665	0.0608496921196814	0.293665080827783	0.207207789050568	0.835847584538576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84798829784395	4.70079158726824
Merged-chr11-44504324-8	55.4801010893902	-0.0911537271609585	0.367441410877056	-0.248076902773101	0.804074906044702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74966242107619	4.69759543789928
Merged-chr19-40663943-8	33.4009085838157	-0.066515012729659	0.400780016570902	-0.165963895352781	0.868185363412201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73562177789732	4.64310230043489
Merged-chr2-169756440-2	8.37423567526874	0.381708098861741	0.661407142251759	0.577115175324864	0.563861653575696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31711242604998	2.51798362982258
Merged-chr3-144698611-2	5.59642705813769	0	1.37202497223564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51534818-2	6.15051926040944	0	1.41046013857441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80190545-1	4.36341295144912	0.572563115168352	0.961972199488577	0.595197153797947	0.551711692599322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	2.2200817938085
Merged-chr19-23038572-3	12.6825325831935	0.979863757800557	0.793656309441615	1.23461975434927	0.216972053490705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.24992080272587
Merged-chr7-31208375-5	18.2425050965746	-0.595580620394641	0.572955978480383	-1.03948757455025	0.298578033893442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01229215593052	2.91101206105048
Merged-chr17-67384796-4	9.15870465715918	0	1.36341624487535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111070858-4	11.3493071747023	0	1.34178590512879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117478339-1	6.03949751062857	-1.58007954921367	0.741433525957111	-2.13111424543955	0.0330797314060094	0.451124214626007	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35553639627429	1.86501351763573
Merged-chr5-43872843-8	35.2203391539224	-0.341578569499307	0.265634532114371	-1.2858967046959	0.198479113918515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66333659986887	5.43046936602595
Merged-chr7-107609852-4	13.7120632560428	0	1.35487677894277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5233921-3	8.83000126314537	0	1.35253312395109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134752416-6	20.1574071251761	-0.225891306886905	0.391411532773848	-0.577119701318106	0.563858596332992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19562565863219	4.02760548221479
Merged-chr1-59755462-8	26.9065964886331	-0.18244724562779	0.331839170601747	-0.549806236849451	0.582452280421278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29280999738404	5.19035852837387
Merged-chr11-117707058-4	8.69632965914308	0	1.34562489461821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121435953-4	13.5241187124955	-0.462337321944499	1.13875622458603	-0.406002015148213	0.684741119760757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22237730641564	0.67591700901439
Merged-chr11-118227844-2	6.90871097047982	0	1.38150180344163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95664254-4	6.5093053556939	0	1.38808536761781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9876040-2	7.77692128569507	0	1.3633895955527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88057045-3	10.9424895766257	0	1.37878810225338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88282497-4	10.1756863891549	0	1.34723643570309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100434370-3	10.3015432092602	0	1.36921302850558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60805495-3	7.75929459920928	0	1.38018542164359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151338412-4	7.11163636087021	0	1.35071284032957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92106450-4	8.78119018634389	-0.211937042599532	0.805929051968088	-0.262972332467702	0.792571904270568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	1.25243428981845
Merged-chr4-57950234-4	13.7356961177203	0	1.36122766209908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100505618-4	8.85449213512334	0	1.36612151300312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25731528-1	3.82887482673961	0	1.37865472757383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37585863-2	5.61995756008878	0	1.3579220836126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46672914-2	5.77851819394355	0	1.36047618474331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32547818-2	6.99902215420357	0	1.37606435006264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129462184-2	7.91260523665419	-0.418634215897315	0.677106130226375	-0.61826971756607	0.536397560069916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49084597027501	2.20225658013615
Merged-chr2-19627432-7	56.6482197169427	0	1.33640672191517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51824098-4	7.41004617023515	0	1.35686694648659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50908370-7	29.3894773492242	-0.35908440911652	0.294195884643753	-1.22056231191453	0.222251783255653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61886060308737	5.14162821820171
Merged-chr11-106677980-2	5.5075050457471	0	1.36337726459847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84148068-4	14.1514356262711	0	1.35811283025801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-158076834-2	4.81881009622275	0	1.37450136046127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91715248-4	11.9348549595316	0	1.35762154235015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117218654-4	9.83198655343725	0	1.34972286791017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-26317193-4	6.90057240991956	0	1.36500879856402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34332938-4	10.4126463330239	0	1.35309232188293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64072147-4	7.57109625557155	0	1.35469350339915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80663741-4	18.2492862870049	0	1.37194063031136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54628510-4	11.6222744277381	0	1.35721872371009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8689474-15	121.636187402253	-0.781231402634691	0.181780727492918	-4.29765802683966	1.72612194723491e-05	0.00139007796932952	C57BL6J_F1_Control-BALBCJ_F1_Control	7.21637523490959	6.42517190808619
Merged-chr7-19500528-5	14.5225253583953	0	1.33970159238825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53693915-4	7.50447038417404	0	1.35434595820277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118153183-4	16.7749376733029	0	1.34812346223302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84815727-6	25.8518020918611	-0.609736231568036	0.525405726127967	-1.16050549365259	0.24584305835051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3358128240784	2.36925341530489
Merged-chr8-80952574-10	88.756444829196	-0.0136116735151908	0.228275176816098	-0.0596283560264488	0.952451633701669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41652104728003	6.39914571898546
Merged-chr1-80765758-2	3.44741399063567	0	1.44986704899219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41096247-1	3.31937854306429	0	1.43728299439119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107013645-1	5.7211376440775	-0.25074748447868	0.914123280283659	-0.274303794561354	0.783851168674374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62235589016187	1.52268200068644
Merged-chr16-32114070-1	8.80381228614994	0	1.35205567448913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51064922-10	80.204336319124	-0.00630918374719902	0.224094555623653	-0.0281541143632009	0.977539234135616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.63535988379383	6.65065960809973
Merged-chr1-152887999-3	10.9534809501876	0	1.34842060501221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148248857-3	8.27327694404634	0	1.36803472996913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180387108-2	6.7163866809576	0	1.36114893435324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7931837-3	4.50999352689933	0	1.40288643894266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79527659-1	1.85723389826571	0	1.67379645975142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135957782-5	78.7521689564827	0.0372540881042629	0.455210467389841	0.0818392606784206	0.934774535264733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66360761615467	3.53169373307401
Merged-chr11-118234639-3	10.5779380416025	0	1.35536435358531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57482345-1	1.78211353844463	0	1.69503441399594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103102573-5	36.8383483230267	-0.299629215746033	0.41740333210575	-0.717840977057944	0.472855344136773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24958000718485	3.624552722069
Merged-chr15-84981752-1	5.83231338896921	0	1.39490725697949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39835513-1	2.92678125565515	0	1.4943450438285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10911189-3	7.1773926372128	0	1.37874017723042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125619355-1	5.39576042520942	-0.119807654208019	0.949078818830031	-0.126235726507638	0.899545331896383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71129485608035	2.47736837392604
Merged-chr5-90612189-1	1.44181257963	0	1.65121603874293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110177679-1	2.26321697591726	0	1.55721896458961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65777114-2	2.7911554684174	0	1.45622974912145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28750808-4	12.0603974821363	0	1.36358389318242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36814995-6	31.0888332592561	0.164993559209487	0.401378396071568	0.411067363924757	0.681023139962113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83713719508092	4.91015436834188
Merged-chr1-77761569-6	33.8716133169236	1.15117892202529	0.505126248894639	2.27899247870091	0.0226675124046066	0.351486080204596	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66233882691751	4.28428568513643
Merged-chr7-115084877-4	10.166957149237	0	1.35611453609496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28350231-6	32.9809138775397	2.35296599927366	0.371275102417256	6.33752703575929	2.33482250173066e-10	7.64569978142031e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59886308470072	6.04254767163346
Merged-chr17-71192180-4	12.8525282012086	0	1.36436389839212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55957997-7	22.9778404769834	-2.12519728539023	0.523387452661259	-4.06046662865965	4.89747371882053e-05	0.00325852844408036	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55551473268813	2.1985101063361
Merged-chr17-23924765-8	61.1930329222597	0.64693552328003	0.324311740877686	1.99479525942917	0.0460652146206408	0.558787652710094	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68952119831555	5.70373680670732
Merged-chr17-8846637-8	34.4442133740592	-0.308183752235351	0.353606204471119	-0.871545092644214	0.383456595886361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20104936393051	4.90122154354792
Merged-chr17-26237184-2	8.51290063473549	2.07829545604477	0.865793744524533	2.40045099561918	0.0163748831077755	0.282220123923769	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	2.64589293845526
Merged-chr2-19629037-4	6.91325717738614	0	1.36163298133665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118972907-8	26.6366576799573	0.534384609121667	0.373417229384098	1.43106575452628	0.152411370850335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22995225697461	4.90610182777355
Merged-chr9-100452809-9	49.8887453240094	-0.618914542422326	0.289017217098297	-2.14144523511839	0.0322381503816886	0.443205264693528	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15209941159275	4.7574314209793
Merged-chr7-106526862-5	32.7326994706282	-2.96564285260226	0.55397715333895	-5.35336671327985	8.63326342331489e-08	1.50415245649992e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48545475715967	1.8314473603367
Merged-chr9-61432002-3	7.76005153353569	0	1.37955592924904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16554551-4	10.6739470049763	0	1.36812150717941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119711023-4	10.4285989898025	2.48508086093064	1.17900080772897	2.1077855457262	0.0350495436890019	0.469044348939058	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.887876939341704
Merged-chr8-70868710-8	39.1167569040558	-0.799567347629678	0.293976329272434	-2.71983580993931	0.00653143384637698	0.148337915093611	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96307398745093	5.10293534693288
Merged-chr10-127592567-7	38.5279934292703	-0.305780855370088	0.398050836711818	-0.768195484516637	0.442371055765362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25386919683452	3.96042867552982
Merged-chr16-30776406-7	30.266535504235	0.560824951764225	0.520599281775289	1.07726800899871	0.281360549919732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47601477343803	3.74122559777557
Merged-chr2-27418702-3	18.2891963026884	0	1.34913798685306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6258664-4	8.49485280803094	0	1.36434222671252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191110081-8	30.8532686894087	0.211832094735345	0.347129871352935	0.610238738342316	0.541703671795081	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35543809365046	5.48486647179862
Merged-chr1-151958667-2	6.5638934198492	0	1.37234936843839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-37928015-4	13.1078207854308	0	1.35264979246335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33820367-8	44.5277636017864	0.146090196836928	0.335650067064827	0.435245546394341	0.663384205674075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36064547559853	4.98030590719557
Merged-chr6-91693671-4	12.7736086617321	0	1.35252473595595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53390589-6	24.1713317197725	-0.0877196407947274	0.581532365278926	-0.150842233437263	0.880100169944711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99059730437749	2.35998564957773
Merged-chr13-111555443-5	17.6429202211999	-1.48981117412274	0.71014944116422	-2.09788403364839	0.0359153907672679	0.475048185666689	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32556459181442	1.21849460895724
Merged-chr4-46088063-6	20.4708567179534	-0.808773289013129	0.546567426808992	-1.47973195866238	0.138944793210881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69081629584433	3.0541548672202
Merged-chr1-177483786-4	13.3004219617623	0	1.34473641397459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32489242-2	5.20007624215505	0	1.41646876124482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68131422-4	8.68276255069998	0	1.36774095047387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19468508-4	12.1859235797014	0	1.35382353311157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51071513-4	8.42222819120573	0	1.35448707101389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88906915-4	9.90531138556166	0	1.3501093053776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101665462-4	7.17708994618972	0	1.35149566212353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106693153-4	10.4626024629482	0	1.35136467672277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16877057-7	23.6072673893431	-1.52660869291472	0.519341921151882	-2.93950599930149	0.00328735906503584	0.0916397699570683	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44647233205409	2.87435179604534
Merged-chr10-78429431-3	11.2645053979043	0	1.38573569472065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9993170-8	33.0700128355371	0.794565097729071	0.263552843176578	3.01482271316922	0.00257129505975314	0.0753493413224372	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00578018507258	5.88411011430565
Merged-chr4-137610468-8	36.9085258210483	-0.218286334041698	0.286583488436169	-0.761684963892529	0.446248051534251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66306493637298	5.45082918438788
Merged-chr12-117566461-7	42.6958534057533	-0.229689288276296	0.392130153081626	-0.585747580162458	0.558045154804248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.865236173923	3.62336141287197
Merged-chr11-37077446-4	13.6296497646211	0.248838814503729	0.704976410646353	0.352974668011349	0.724107431751877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80087394175037	2.39184402524781
Merged-chr8-14651614-7	62.4237833658876	1.52017625004564	0.321466446619226	4.72887999986598	2.25761762189581e-06	0.000253557513034369	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22873116108039	5.50850663580175
Merged-chr12-73632929-4	9.01472793581801	0	1.3542370952245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153356988-3	9.21033336463245	0	1.3551666525813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120916662-3	7.58434552403566	0	1.37221383270155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45906829-3	8.81902781359148	0	1.3464594173849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60527028-7	32.0087039114849	0.475193645536619	0.402131536314867	1.18168709147085	0.237329882143259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79304203564856	4.29905767658506
Merged-chr6-51551626-4	18.2493849119335	0	1.34191804322409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115311462-4	8.88533948749792	0	1.37403270730052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37538531-6	38.3372671427145	3.49733858288147	0.729398333836452	4.79482666828473	1.62815546947529e-06	0.000190743325787085	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	4.24517176185624
Merged-chr1-39922892-4	10.1407649708592	0	1.36053748170049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9706696-4	12.6471294583832	0.133655506543891	0.660486193361836	0.202359273951802	0.839635864402891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80880889089274	3.10233963639177
Merged-chr16-84955652-4	7.59329115085437	0	1.35938874360998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-98698884-4	7.32043308971305	0	1.36997299644549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7828878-4	8.46895176311676	0	1.42822957255831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133662514-3	13.9121289274068	-2.61185201914812	0.671397401536236	-3.89017296339232	0.0001001727963106	0.0058741025184983	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79508156474903	1.92655187836465
Merged-chr13-89339992-4	14.6057869998076	0	1.36035583748126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16052025-5	21.0463385083354	-0.544018245051395	0.43950492797008	-1.23779782757847	0.215791034174827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05283358615251	3.08004075673278
Merged-chr7-35122888-1	3.52212962388975	0	1.422216806614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146818919-8	36.0761883242885	-0.0705587456610033	0.356525116333455	-0.197906802153625	0.843117982092458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47033268585175	4.53358198461316
Merged-chr14-10535043-1	3.3647052524023	0	1.41279677984437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108790681-3	8.50431222502206	1.05458125851855	0.784579262351578	1.34413603458969	0.178904401473896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60230598860646	2.74566211231823
Merged-chr4-8898206-2	4.13222742446826	0	1.48579337725078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16913943-4	7.52901012904143	0	1.35412694737114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20414230-2	3.23574206973377	0	1.434283955127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4348798-4	7.07563135121914	0	1.35682280093388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10972182-2	3.41102292429522	0	1.47253590742516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52221771-2	5.85872752077191	0	1.37101191754745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35689100-2	4.01861516368815	0	1.4181613805671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55205269-4	7.43267029677501	0	1.36343008463972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117909347-7	33.4448465912228	-0.960851877587838	0.402918945282092	-2.38472747146482	0.0170917777717364	0.290431993714855	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6928461363828	3.78136674941373
Merged-chrX-167315981-4	9.01565369459914	0	1.35961539187558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41333122-4	7.57831317113591	0	1.35929610171662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7958850-4	9.6158782932378	0	1.39805251867962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33991978-8	44.6073978521351	0.712506961778339	0.314676280157976	2.26425379574412	0.0235585095943218	0.360812230693897	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79774669021829	6.53521541050494
Merged-chr3-152262164-4	8.0021047178346	0	1.35806377863289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113001045-4	9.29081319364674	0	1.34785119466331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30444747-7	29.1138868179586	-0.0558411957369206	0.475932906285155	-0.117329974455398	0.906598572888163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92486636045365	4.00610249363331
Merged-chr6-125254297-4	12.3315369679244	0	1.3499373012017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48699093-7	28.464971321623	0.261363845892892	0.364389180000106	0.717265660557803	0.473210191446105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31675359186504	4.41018054100735
Merged-chr17-42457667-4	13.2171970716417	0.087462882892305	0.770898926972349	0.113455707138949	0.909669276858823	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05916644618774	1.46665878981685
Merged-chr13-63696614-2	4.45057768485831	0	1.37442137179052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29673392-2	6.53927776968114	0	1.36380268043114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81072484-4	8.7259055629536	0	1.36163777597782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57836246-3	8.10488378683579	0	1.38517047100088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173679404-3	9.66561486835306	0	1.37496908716909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41102710-1	6.09314607308994	0.834834537407614	0.766764699535638	1.08877539343321	0.276252945188468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6052381318096	3.35092207650228
Merged-chr13-100576122-3	9.29920937829985	0	1.35267733086735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19745990-1	3.71145125347237	0	1.40703881036281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83853222-3	16.5745216065573	0	1.38637043940144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14677220-3	8.19569693516694	0	1.3840406188045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75432943-3	11.45485796241	-0.0365387058966751	0.485678312745653	-0.0752323192899293	0.94002987013534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43418911065378	3.39924323452429
Merged-chr10-128149801-4	13.0095282616799	0	1.3578455533439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11589367-4	11.2647379634239	0	1.35309695187434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94502349-4	12.2119941201415	0	1.36877237359433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169958687-10	55.853047424746	0.124274044685406	0.476617516276075	0.260741664839321	0.794291733216707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09703810615165	3.46546158403433
Merged-chr1-88576343-4	8.74904624297375	0	1.3520790620904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73003255-4	9.88899309888893	0	1.34708402859102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81348444-4	18.4128205811005	0	1.35129995695824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63410699-4	9.83016393239079	0	1.37440121645583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115019581-4	18.2955934215296	0.00887701106050513	0.485915331123054	0.0182686375422411	0.985424546905511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7510669118949	3.14547058070607
Merged-chr6-134211484-2	3.29755159265574	0	1.48359213762602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100439450-6	12.7628372265544	0	1.34600722031226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97482107-6	25.8967125814605	0.762223489921733	0.551012229327646	1.38331501435424	0.166568296242197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41606101293691	2.77232186059373
Merged-chr17-67233223-4	11.902938982922	0.919954003225226	0.764243597465254	1.20374446874846	0.228688358943634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.32937334132141
Merged-chr13-63718988-1	7.25017820707883	3.08460885754546	0.97906080252662	3.15057946307844	0.00162946924035894	0.0528183174935429	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.54413496599774
Merged-chr9-115548115-1	6.52564220266701	-0.309800787882997	0.95730906242552	-0.323616269857572	0.746228568733568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	1.4771514048608
Merged-chr15-85089664-4	10.3541460749547	0	1.34517262278515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120885398-4	10.8085855164984	1.37894889429558	1.09005681255817	1.26502479357881	0.205862440197042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.1442012793241
Merged-chr8-61875522-4	8.76941666265361	0	1.35440942151163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83675926-3	8.85745229380478	0	1.35040127798318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68873307-4	14.1898476734938	0	1.3425627112535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90761450-2	4.38908369468339	0	2.15485221816804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106551247-11	68.5743290428321	-1.98316997051912	0.330513158392803	-6.0002753904345	1.96983157332529e-09	5.2747819947975e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	7.15684906894657	5.2204491126411
Merged-chr9-40628474-8	78.7811451567169	-1.20559213192193	0.278609113401654	-4.32718125118867	1.5102967671525e-05	0.00124203058949535	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9820609010891	4.86278030587499
Merged-chr4-117146398-4	8.14988482553588	0	1.35550942872129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78745713-4	7.09388568494842	0	1.35065405047584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85376542-4	16.7905604841806	0.437365275609903	0.515910900601064	0.847753507631547	0.396575260280176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56807384835358	4.08681673372941
Merged-chr1-131978330-1	2.40835180138218	0	1.52052007129914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29512740-1	1.65808294139339	0	1.77281491555439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3032291-4	20.7149811818897	0	1.37659336101141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76071056-3	11.633640876559	0	1.35017696054766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102753549-4	8.47316593203896	0	1.37438539000395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25242454-2	11.9253685574415	0	1.41093211119643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15959115-2	6.94219704193613	-2.07693647893478	0.984296904024825	-2.11007112837815	0.0348522297038703	0.467208965344682	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52643598000085	1.65345633230702
Merged-chr5-45384452-3	4.66141762626524	0	1.4596698218417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34112488-1	2.04011151933758	0	1.42008001254226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98123266-1	2.57814428544965	0	1.40856259765565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143992800-2	9.71651069863068	0	1.3468840662745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9530519-1	4.2233739446327	0.767144711311403	1.15099828298852	0.666503784279804	0.505089145650939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	1.68580115571326
Merged-chr6-5112603-1	2.3143707328373	0	1.46936413485072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114826877-3	8.49698061137931	0	1.41676512636046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39614578-3	8.26807931492809	0	1.34934495370041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125332988-4	10.7305217209554	-0.0538297713420439	0.646186062386192	-0.0833038260578772	0.93360995811696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32843128278891	1.74808564693362
Merged-chr6-57721910-2	2.76566955422131	0	1.56994096840507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170345689-4	10.143639698133	0	1.35204901319351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100883373-4	11.345392912661	0	1.3520195932951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84238383-3	5.73974091594042	0	1.36661772860935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120258966-3	5.2204328429704	-0.0579164828639157	1.04095104001884	-0.0556380469756459	0.955630154330235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.06633037676026
Merged-chr19-3882426-4	8.90553283116149	0	1.34956845762043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64277151-3	7.13861067229924	0	1.42669649084507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61558437-3	5.43746686464901	0	1.37631390825336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59643096-4	7.57641755148464	0	1.3482730710929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180303815-4	23.6953115360548	0	1.37425235096887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65694925-3	6.36221129204126	0.596299669785904	1.11922311832157	0.532779979277178	0.594185894357628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.14143228603163
Merged-chr7-112000316-3	8.23514623362974	0	1.37431489876703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84388838-1	4.26695925852843	0	1.38012811347229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110389047-3	8.11221041622385	0	1.35814992180144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90085555-6	25.5404395270956	-0.253321099480076	0.486746446150347	-0.520437491600771	0.602758684691064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89003773342591	3.54679557525196
Merged-chr4-154942822-9	46.0926609153469	-0.853859616609876	0.370694835727684	-2.30340305371055	0.021256176099609	0.334432554731879	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14787901321471	4.23873208421388
Merged-chr4-11022974-4	7.19050801293427	0	1.3860390888798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54999158-6	24.013178046222	0.349172756637072	0.557126901009382	0.626738281717242	0.530830805759996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72065437544902	3.02305153286915
Merged-chr4-43005912-3	8.74039930679628	0	1.36934851099812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-144772196-4	7.93983331560111	0	1.34635876790253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-69985361-8	31.0489277277532	-0.0657462815430722	0.337149919846038	-0.195006071996386	0.845388194112699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53357066302157	4.46610537336781
Merged-chr7-122939331-4	6.19760475218356	0	1.37400954895031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62516357-4	9.46544466968628	0	1.355500947152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103262572-4	11.2383453467342	0	1.35770555212229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62558384-2	6.10639204578241	0	1.37504251088438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49754945-2	4.59729239121372	0	1.38501587194387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132382480-4	8.91080057545602	0	1.35226344529064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32944163-4	10.3181913643547	0	1.34940758635392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4334479-4	11.748971231439	0	1.35740469948382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65931689-4	14.1542651739787	-0.612110168932913	0.616036323993965	-0.993626747469049	0.32040461731226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30765547621154	2.32784268624641
Merged-chr6-108566706-5	25.603966995921	0.115529461147235	0.45860702355874	0.251913850448123	0.801107653657925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1986655900168	3.66829181023436
Merged-chr2-79653731-8	48.5378445840711	0.738064822098266	0.44639615747258	1.65338524927514	0.0982524829780935	0.90111468233612	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35642168220476	5.11791405216689
Merged-chr9-62058219-4	10.1225205297338	0	1.36295930735909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73146934-4	7.9220439726825	0	1.35142824105962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11088793-3	5.49680861266348	0	1.37310811719815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77197303-3	12.5889136853054	0	1.34453037642404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66114317-4	8.18257281949379	0	1.35293851188837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99146169-6	50.6525673041372	0.487327764597347	0.410628746529126	1.18678433674341	0.235312698664741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83009140821405	3.68946120555308
Merged-chr11-113450299-2	11.5657730268029	-2.89189217843384	0.657623341958785	-4.39749016484132	1.09509845429821e-05	0.000948251948796341	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99574130046942	1.5682414637086
Merged-chr8-92881431-9	44.3278789059034	1.42682910699498	0.339318792447941	4.20498109374206	2.61103982259809e-05	0.00193633715848035	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32980249562079	5.81398296136888
Merged-chr8-64615653-4	11.24946692837	0.318365572653226	1.00530966465126	0.316684086354293	0.751483325018096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	1.30281892590853
Merged-chr3-145964189-4	14.5858998188585	0	1.36088249986377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44076952-4	6.00426414692155	0	1.35995330369448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17804765-4	8.45367178113816	0	1.35009477715636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87330901-11	74.6955851284865	-1.72330594194935	0.263277420990393	-6.54558957417101	5.92611252069751e-11	2.36865845965144e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	7.00628142298018	5.20221915868261
Merged-chr9-83400955-3	10.1342118487132	0	1.371050400016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46140053-4	9.53219484537863	0	1.34690673580357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115510485-4	9.42810334887867	0	1.36150095892284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73067623-7	35.312472182032	0.904597710508597	0.433248131558519	2.08794370850371	0.0368029127924535	0.4818327400012	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14748759870119	4.08428749677768
Merged-chr2-30545210-8	31.5335015547948	0.118143605040614	0.34023901072905	0.347237093087771	0.728413206187827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4965071632283	4.59451613737163
Merged-chr19-46319279-2	3.10643265256837	0	1.40522081971337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36375292-4	8.16437134801672	0	1.43578829875117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26363242-2	4.99751796232266	-0.394243239998707	1.16487462612278	-0.338442636793389	0.735029648255562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.723581231604105
Merged-chr16-38679068-4	11.9914862652436	0	1.40323733292139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17629940-5	20.3340960537821	-1.32962332532013	0.676488602449618	-1.96547779298197	0.0493589634551442	0.584681606985876	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08508095974447	1.61224616757942
Merged-chr15-28365347-2	3.28972975505215	0	1.44501388772512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108895828-2	4.77944040226766	0	1.37856347895746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81230322-4	10.5092259916749	0	1.36832190377229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6522957-4	16.4287591239493	0	1.33956212165365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34236953-3	8.74472608499708	0	1.35483496963676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-37877852-4	8.54570343891745	0	1.35739896564051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120324806-2	6.69207227651028	0	1.35965660336221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126725870-4	8.00441556320702	0	1.36020886612775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104118599-2	12.5340643156226	0.942888034454344	0.61093952817966	1.54334101979577	0.122748055905584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37183764083286	3.26617530235037
Merged-chr4-33265300-7	44.4248794176381	-0.146384346164849	0.358945642390536	-0.407817588172811	0.683407600013225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20584208015607	4.31360496369265
Merged-chr17-7877569-4	7.76829555762995	0	1.35898888403997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31067265-6	27.0575177943099	-0.864120346455212	0.466117042657238	-1.85386988111192	0.0637577778255705	0.692331011749937	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75517949855069	3.07389803427425
Merged-chr3-96256105-4	8.4325330491509	0	1.35870767201962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93261444-7	43.3293483635449	-1.54250892363858	0.45717851344058	-3.37397510663864	0.000740910675644204	0.028543701925828	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34752461083257	2.4884846491966
Merged-chr3-83863560-5	25.047140798374	-0.232859254638132	0.405523311051955	-0.574219159027083	0.5658195060031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14860068623511	4.05506139873605
Merged-chr17-74802949-5	50.8108956590043	2.72859076524707	0.312466689198555	8.73242127743479	2.49277748477966e-18	5.01869967759769e-15	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80525618608572	6.57298979659385
Merged-chr14-16240195-4	8.80490306559983	0	1.35334448461715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3698188-4	10.2276493881081	0	1.36040056917331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53248281-4	10.283806860954	0	1.35272276494107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66710751-4	8.88924690322713	0.723749350540619	0.833574839208165	0.868247596374344	0.385258803177409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.46460328489499
Merged-chr3-107778209-7	44.4731949534029	0.377567576839259	0.383619565649535	0.984223982945111	0.325005396241296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97076838366078	4.37934283637018
Merged-chr1-157549871-8	36.9325019972087	-0.00717044876539409	0.30589412637659	-0.023440949489061	0.981298541001534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18860771740617	5.18498450698617
Merged-chr11-3167431-3	13.2657717956895	0	1.35223049588379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74380533-4	9.85763220240467	0	1.34945834758378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32249918-2	6.57738562311356	0	1.36172501747571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-150935231-1	3.62842407092104	0	1.45161293517553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35064446-4	12.9843282198481	0	1.35281643545821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168005813-3	4.63940619341295	0	1.39440392908941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55951789-2	4.72336589475326	0	1.37243934971957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156735876-6	24.9887956133945	-0.800363458347347	0.535968076020838	-1.49330434806761	0.135357537943485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54238871291771	2.96704103014614
Merged-chr17-71286155-5	35.7997999225443	-0.692944874155877	0.459484178542211	-1.50809300192742	0.131530726036836	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04575952826687	3.32074624485143
Merged-chr9-58266629-4	11.2566863124999	0	1.3404889846523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33915189-4	9.43052387425347	0	1.35909260109001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60663213-4	11.6083390135669	1.00059474979173	0.735060828440638	1.36124074508826	0.173437621812847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	3.13864402900927
Merged-chr4-46560540-5	28.0822251951789	2.24009449066339	0.435050128044488	5.14904914689352	2.61810280804844e-07	3.94231164938241e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22007058875543	5.77238068458816
Merged-chr1-34463028-3	10.7131243426876	0	1.35335278507285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8971798-8	36.7278708247933	-0.358701327774432	0.417258847377742	-0.859661406890918	0.389975714555702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42258187673237	4.04507913412502
Merged-chr1-64446211-4	7.16651841957074	0	1.3575290964661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55434053-4	12.5150907850124	0	1.34994568080667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45554921-4	8.14351859235026	0	1.35534631162943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-29338850-4	11.1017172052788	0	1.34639158960576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161487356-3	12.0249230606856	1.3228963761704	0.931982947494445	1.41944268371744	0.155769995782929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.92385917873864
Merged-chr11-44417486-10	91.1742308492321	0.441450223637434	0.196441740584635	2.24723229555809	0.0246251852191081	0.370188175698424	C57BL6J_F1_Control-BALBCJ_F1_Control	6.45961856306453	6.86372597350696
Merged-chr13-113918205-4	7.12882015665327	0	1.40139860968177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83436722-4	5.66901811180322	0	1.38095790773285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-137852454-4	8.76838758673399	0	1.38090728845064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37486472-2	5.90761285861692	-1.06025548989391	0.828603826890269	-1.27956866174879	0.20069687723563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35651348678689	1.75107117680423
Merged-chr1-172191716-3	5.56686955866831	0	1.37200600422395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42883141-7	19.4976095558125	-0.558185077061357	0.354335202050441	-1.57530235164695	0.115186671436618	0.991360397818732	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7705238650475	4.11233556300603
Merged-chr5-77174957-4	9.51884066652035	0	1.38286310779618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3179807-3	13.6037390959944	0	1.37941041507738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3162427-6	26.292929871131	0	1.34942442487204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25062108-4	9.82417732210324	0	1.35293857463007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114195002-4	8.43192715489734	0	1.35723569753464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-162510642-3	9.45770675884266	0	1.34942507307269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70692503-2	5.31516736661383	0	1.39767596229485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9796226-2	5.96560246695322	0	1.37826617729321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49454793-4	10.2844174804444	0	1.35440283858288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104186471-8	113.342603167897	0.325659028736019	0.328117603685804	0.992507031252918	0.320950251233518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33579404716024	4.58463317148734
Merged-chr4-132809848-4	9.13682871255699	0	1.36295771246101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77196976-4	7.99683168767575	0	1.34676345794795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123343642-4	9.78553515016274	0	1.36218963657565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83265787-3	9.54196593627529	-1.66030443683763	0.637601757063259	-2.60398347157144	0.00921472004961658	0.189818312240694	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1758356820034	2.28072124323979
Merged-chr13-95791129-1	6.32413272106278	0.920182524296909	0.902235995996718	1.0198911685854	0.307780078421871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	2.46657426367291
Merged-chr19-37689659-3	8.52418440305763	0	1.35896740353071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103389607-4	7.65644236993266	0	1.34617288574269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127086385-8	33.767552661386	-0.172365759686003	0.282546659124943	-0.6100435242088	0.541832976234959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31334721363806	5.16594490720849
Merged-chr15-53196491-4	10.6232001242506	0	1.35891440293871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119976883-14	76.2620795437813	-0.0322632765797906	0.31119432177444	-0.103675659619444	0.917426743351789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75355088210728	5.71457074722047
Merged-chr16-25042152-4	9.44230529035765	0	1.37281070357238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79955054-4	6.91351861173678	0	1.39710845672208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96655669-4	9.22558732589835	0	1.37512475830085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65515891-3	10.466109411527	-3.18650394047327	0.698818798764907	-4.55984290363267	5.11919022847141e-06	0.000508727717786979	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89958829575438	1.2523031194678
Merged-chr4-132586311-1	3.13634338811787	0	1.42197791230145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124037101-4	10.1634762629934	0	1.34450580801686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80024353-1	2.83796435365578	0	1.41871971946174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9837145-2	4.64995346676525	0	1.40816742742558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24600969-8	41.5515257875231	-0.0955053464959192	0.353100303934093	-0.270476534378021	0.786793667237488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57593655783624	4.48550910047553
Merged-chr1-171711662-2	3.08382942368783	0	1.45292930876031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6554814-4	12.6092731618354	0	1.34188902225853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-7800237-1	3.77590357223841	0	1.46266209467816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119070013-2	3.90254956894284	0	1.41197290204516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11395043-7	22.4889196472227	0	1.34057588031519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32816944-1	1.66418374118361	0	1.57926436580903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100101314-2	3.63717369597842	0	1.40279262033348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9484671-2	10.1119250314912	0.309451156645235	0.730208608634563	0.423784591123742	0.671722916703515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08939397228322	3.06735584039599
Merged-chr4-53337777-2	3.5982139369107	0	1.40787468518431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-14443551-2	4.82750879990061	0	1.45533069305149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44401855-1	3.19103134026288	0	1.4209096490305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129331456-2	3.23939063892396	0	1.5120876644172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47013132-1	1.71518087285267	0	1.52355881566464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55542710-2	2.38263515006008	0	1.479382213855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80612166-2	6.94919609741402	-0.0330297145967106	0.834189568513845	-0.0395949743840059	0.968416034159389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.46460328489499
Merged-chr13-80935839-1	2.69127846986379	0	1.39993137417687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41324002-4	10.780669309766	0	1.34980888573106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21368949-15	91.3019436706389	0.784061164907838	0.226285436374677	3.46492101952868	0.000530387219494362	0.022401957159669	C57BL6J_F1_Control-BALBCJ_F1_Control	6.55260311973993	7.40858990001736
Merged-chr2-11766715-3	11.0124626995902	0	1.35263020891709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110978590-3	7.40955783847251	0	1.37488415241746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29765291-4	8.62318799236639	0	1.42099194872205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100378667-4	11.1863017260721	0	1.34656247382367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34297227-4	11.5738229145665	0	1.3434911378669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53653915-4	9.02540328275563	0	1.34837513507358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77610301-4	14.255384678636	0	1.34697987140444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128209901-4	12.1789079998566	0	1.36955532018239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73546682-3	5.95881343275331	0	1.37459828294791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157008182-9	61.8813909789207	-0.309971332861022	0.256018651822435	-1.21073730626473	0.225996099689938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77793485454222	5.53778568588337
Merged-chr1-171762990-8	32.693672987038	1.18963962638208	0.870826367667908	1.36610427813292	0.171906235713104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	2.51130439439051
Merged-chr7-127921704-4	7.70255991445081	0	1.35792435457872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74522575-4	17.7037966581434	-0.696753972076814	1.35998695772671	-0.51232401025483	0.608424263928922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr16-24194090-2	4.54896173121333	0	1.37096968309638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70595722-6	24.8782951754458	0	1.34307158262349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167988444-4	10.9717942116413	0	1.35916817400958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76522158-4	9.43543769471184	0	1.35144133123589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169934579-4	10.5375926637682	0	1.34596328579259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12367614-3	6.57663539882026	0	1.40891524006509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88191295-4	7.84670394126879	0	1.36158139817201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114789366-6	18.923992750859	0	1.34006376704382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71836150-4	5.15777684756987	0	1.42993978412054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31040739-4	9.43035859934406	0	1.35896053561435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58999276-4	7.93094971579664	0	1.36886166636631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-57305179-4	10.6690770027965	0	1.34843037147174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84131635-4	11.4989727377179	0	1.35737025099473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21890535-7	41.0391478148376	0.387855793972622	0.28917020914785	1.34127161686395	0.179832281564217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41838471789459	5.79731060093273
Merged-chr10-40832412-3	8.60414339204433	0	1.37356068316278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36713538-7	45.1887663420483	0.129821551826408	0.289736681468221	0.448067366439575	0.654104578865122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99209020645313	5.07723973886104
Merged-chr18-34886153-4	9.33701319221868	0	1.34956528669505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43549956-4	9.58582826103242	-0.0353796809221826	1.11465236307126	-0.0317405516682342	0.974678955611542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr10-77974899-3	8.63656209699164	0	1.36061809144666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8643480-2	5.14280583982662	0	1.38065296485096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128268126-4	8.223598784794	0	1.35740654142755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84621438-13	134.034317824224	0.220525818854087	0.220573561724801	0.999783551254553	0.317415267718771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.70770663431511	6.91604296337366
Merged-chr10-20005668-4	8.13089489234674	0	1.36397393412651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102657440-4	10.3216966656677	-2.5465383644786	1.15350437805465	-2.20765383550018	0.0272684132296663	0.398035358418752	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	0
Merged-chr5-139285515-4	9.00492282083877	0	1.3484384037912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114164497-4	9.88529532954556	0	1.35930708166629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69570490-2	6.18020064167054	0	1.37474170561633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53781011-4	11.2033363557789	0	1.34823164858266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90482873-9	49.5381632664815	-0.926019982826265	0.250466596748046	-3.69717956346005	0.000218008141503965	0.0111817998022608	C57BL6J_F1_Control-BALBCJ_F1_Control	6.02519948046114	5.00710014522851
Merged-chr6-15729433-3	6.09512722568452	0	1.37700991612413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126515194-3	10.5972718165353	0	1.35423720921167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-88810269-3	7.31579777224977	0	1.39073938956148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86610425-4	9.07545627641692	0	1.35420066236697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136429821-4	13.3498522779061	0	1.36188323747761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170311153-4	8.13340166387633	0	1.35161748282523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-137405396-2	4.83652058151951	0	1.39638048713373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119178483-7	44.0433975896615	2.33656364388335	0.369971905420385	6.31551642070877	2.69260793045764e-10	8.609851440691e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44691177262104	5.82185260915129
Merged-chr19-32494819-4	15.3693008975374	0	1.34812230625652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6334977-4	15.5027468949106	0	1.36667264252458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80786945-4	10.877548929776	0	1.36998286148215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67973921-4	11.9393608878032	0	1.37716322707433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21477276-3	8.07859532766885	0	1.36323186260365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-95941925-1	2.6319963293047	0	1.40244489960714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145802648-2	11.1275633541911	0	1.35462623776708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75612188-1	5.35331608269389	1.18651775551465	0.911139770315169	1.30223462323922	0.192836192711194	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.88744669294464
Merged-chr6-66962716-3	6.6259572270008	0	1.35905490795974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36231422-1	2.66672856001408	0	1.3965202511182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47281090-3	9.78125203047006	1.4339431198453	0.898241000469587	1.59639018826312	0.110401705381942	0.967487716082053	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48219169541115	2.34706616758795
Merged-chr8-39742605-1	4.58204775782041	1.43401950943351	1.28918206594491	1.1123483232622	0.265988414311013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.662147012823607
Merged-chr2-117197238-3	6.47259172537068	0	1.38401624049902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112688540-4	12.1639812009958	0	1.34650921344522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98933363-4	11.5691025765995	0	1.35364735404473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78489112-3	13.7206713274697	0	1.34525940851572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103785940-8	24.9653666245261	-0.146671406617063	0.351393818029389	-0.417398938432081	0.676386631230931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98767826862148	4.79496951519573
Merged-chr6-97856448-9	26.8052874043081	-0.0584226608131687	0.376960035481246	-0.154983699369042	0.876834168043316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92650677464113	4.08834037115695
Merged-chr7-25784289-2	6.82145721209215	0	1.38225032857027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27612190-4	9.5094898417809	2.59969162005186	1.08637948160122	2.39298667185814	0.0167118481507943	0.28630297939774	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.52633957112176
Merged-chr8-117303796-4	7.51629014622471	0	1.3538203278488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27373617-3	10.2128474290838	0	1.40447265601172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58712438-7	24.5589022516967	0.553078804973844	0.310297099110038	1.78241693705847	0.0746812655405539	0.761936733017825	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04904914919853	5.55882635996613
Merged-chr18-62095721-4	8.63292519319854	0	1.34298633370954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138686062-8	32.9303158869837	0.956304362009121	0.383707901697281	2.49227174571865	0.0126928884136803	0.238085825148119	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70484431977805	5.76923114745702
Merged-chr1-144312757-4	7.09718650586835	0	1.35292688638155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66175948-2	4.01190607530442	0	1.40071128473914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9880241-2	7.43253729880947	0.794492167346514	0.796347694922252	0.997669952977111	0.318439427882198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94985701881947	2.32164486162473
Merged-chr17-81552005-4	10.9737268823024	0	1.34961107057802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5150904-3	5.39927536019552	0	1.46104877317105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82688929-3	6.17299772620947	0	1.38800529533829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142949762-3	6.40308234920859	0	1.46061430180577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11144119-3	26.8660448383835	0	1.48722686051962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111182273-4	8.77206876973202	0	1.3674470245318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119524687-8	29.7870671327009	-0.321113509372804	0.331763872676185	-0.967897760484075	0.333095432915897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43409950361141	5.14201871546348
Merged-chr14-21303020-3	13.4721315371925	-1.25927953730969	0.724656263894207	-1.73776119803683	0.0822529003487463	0.80794821287631	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88900786427689	1.38647389072186
Merged-chr13-4650405-4	7.66667614851521	0	1.36481730336507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47561055-4	6.88278389448292	0	1.38643229364349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104041217-4	13.0775241556839	0	1.3724048815657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96026826-2	4.38011569746336	0	1.39691681263697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84881720-4	16.0605301611053	0	1.35681525461045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3381994-4	7.06797425381197	0	1.36168318552923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141488368-2	4.63630547696987	0	1.40234451929543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123531073-4	14.8830386544199	0	1.37202064086435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139219259-8	33.5427915511941	0.121898172326545	0.277468462654426	0.439322621246378	0.66042778535309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39556554266315	5.4833468767181
Merged-chr4-118107411-6	26.7792603060111	-1.41905268533058	0.385526106224948	-3.68082125287409	0.000232483945416533	0.011777814341936	C57BL6J_F1_Control-BALBCJ_F1_Control	5.71699832634308	4.16601413414869
Merged-chr2-167717612-7	37.6418661712833	0	1.33688369552051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72402066-4	9.89886241625619	0	1.34979081761904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128782408-3	10.1535575592419	0.835986233786078	0.842647205957687	0.992095182747283	0.321151096236417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.02497645810754
Merged-chr3-27611330-4	7.86154232800997	0	1.3944408844423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-39881285-3	7.03815042239856	0	1.35745247863413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87910894-6	27.5710813129009	0	1.34025921089326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36713282-6	30.6422074263194	0.385409371620766	0.480528764843934	0.802052654945514	0.42252250033707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45514567258509	3.40229626003495
Merged-chr10-12035327-2	4.09263667570973	0	1.41625542735296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39303912-1	4.91619627615494	-2.77834259873542	1.08998397996349	-2.54897562698901	0.0108039850667177	0.211637414141156	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4731063392741	0.601513806634888
Merged-chr6-125515706-6	28.9163620085953	-0.242630778440795	0.403999204269601	-0.600572416669612	0.548124814389428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65550626783519	5.46547029772941
Merged-chr3-65973521-4	8.11318906722762	0	1.35021284171525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60835124-4	8.0598931949548	0	1.36037548974547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40933371-6	15.1087753425354	0	1.35890404031467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97018206-6	24.9781051288058	1.04273398543111	0.39978638539438	2.60822785248796	0.00910123502531292	0.188470108472756	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60154920368109	4.66078597450065
Merged-chr7-114509650-4	11.17344466883	-0.93594450459975	1.03547764968439	-0.903877070533604	0.36606058883867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60308582214967	0.723581231604105
Merged-chr4-58304049-2	5.25728784719892	0	1.39318031327779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103363338-4	8.61648854229343	0	1.36042254580563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137879529-4	10.2192067623696	-0.416593409592789	0.790225284111967	-0.527183093187083	0.598066448183679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	1.40024388691264
Merged-chr6-83613473-8	30.3833080160114	-0.651414422373632	0.344621074118544	-1.89023385769367	0.058726690354022	0.656992006782112	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87046798316499	4.17716643057217
Merged-chr9-62913665-6	15.5689460094481	0	1.34607894059502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35297582-8	33.1456662116083	0.622591573141311	0.327304509201562	1.90217841685128	0.0571478334704922	0.646513856321016	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42384184848246	5.02031216878612
Merged-chr16-35776443-5	16.4479674140251	-1.92661596450041	0.555870140380203	-3.46594613479804	0.000528369123411529	0.0223514530579979	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57247888360727	2.73960921706998
Merged-chr12-85604540-4	8.49468919894862	0	1.36637640893841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-97115724-3	7.39347169783129	0	1.3491498395803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11809669-4	12.9173892578265	0.232722739518512	0.667310401168715	0.348747358217293	0.727278986985034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	2.22377753961315
Merged-chr1-85986947-4	8.7888188832124	0	1.36013241026173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71444962-4	9.23008184006456	0	1.36326076650955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16255607-4	9.57139454660552	-0.0341061096419805	0.918996035866807	-0.0371123577370073	0.970395418767915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.730937814817307
Merged-chr10-39378192-4	8.28962068949029	0	1.38658244471327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75901598-8	46.2851825223478	1.86888081263752	0.290824239503057	6.42615215234794	1.30874410663204e-10	4.57829062460853e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69577719341849	6.48459353855474
Merged-chr8-115568562-4	8.42879640874566	0	1.34917273672864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23021825-4	12.9530441240296	0	1.36147108559522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110430014-6	20.1642271045303	0	1.34249578542297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149843142-7	33.7806042021639	0.163102453178347	0.363135178190371	0.449150792801576	0.653322881698397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26917368561318	4.02263382480338
Merged-chr8-34744884-6	34.746323180325	2.56383122241356	0.451658031070906	5.67648762125313	1.37488499590158e-08	3.03810461350463e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34692646643635	5.91714409299197
Merged-chr19-21784428-1	2.3334122967268	0	1.59979594897196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163243015-2	4.01778018353057	0	1.3905962651701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99401405-1	1.66474340368294	0	1.49320068216847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78634193-1	1.32966628729637	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41038680-2	5.4370570980325	0	1.4162895772874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65550387-3	9.8438246111353	0	1.39383956596919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136218114-4	12.0210633099262	0	1.36170185190699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60290630-1	2.28278155143961	0	1.45686549991502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38942331-1	2.83118074492546	0.991237131114268	1.09852454289517	0.902334988804029	0.366878944416364	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	2.63966566342379
Merged-chr13-36086760-1	2.04669193269643	0	1.71514587986453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25319232-1	4.07803781041438	1.66827488346196	1.23300445139517	1.35301610758523	0.176050484565351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.730937814817307
Merged-chr5-66232568-1	1.55647069929037	0	1.62453164589962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-54780932-2	3.63096119706155	0	1.40518558772919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8569891-4	9.59199173305001	0	1.3522787690732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96524025-1	1.1763181737836	0	1.92552296532736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33400622-1	2.28011659542035	0	1.47637645714812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96273745-2	3.64615661903289	0	1.44957073198415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67343226-5	52.49408779101	0.495429766205216	0.416132861829454	1.19055669871192	0.233827659100521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34985657602134	3.86870340895678
Merged-chr16-93778618-2	5.43927910795132	0	1.37439407446186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72281781-2	4.84036472525033	0	1.40683846862188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-42180180-1	2.30511001761668	0	1.42422242421429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121249932-7	27.5076274971073	0.569800459842016	0.290729605290624	1.95989830231573	0.0500076780985741	0.589795481397351	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97152659779	5.67250209494811
Merged-chr16-84583557-11	92.3930026925258	1.36968077461195	0.289892015365757	4.72479648286903	2.30345925878072e-06	0.000257824171691062	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97096341446122	6.4188392780197
Merged-chr6-17643021-4	7.67804270560012	0	1.35303764225047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167131446-4	12.7719090004196	0	1.35385394415125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94630282-4	6.29567379925045	0	1.36844361143285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45600704-2	4.49671812971914	0	1.38352459632414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28522696-3	6.93441496488271	0	1.35429514495186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11950080-7	30.9923436074598	-0.426832869521664	0.328623159392294	-1.29885206602902	0.193994702455329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39340487805394	4.99623156154209
Merged-chr2-122452748-5	16.117722056982	-1.38555086637048	0.619877969394463	-2.23519940178544	0.0254042607532094	0.37896548031935	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38731784117909	2.0560328530563
Merged-chr8-31031833-4	9.73165485793666	0	1.3510064331451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25759849-4	11.8381997215439	0	1.35280522365444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27217196-4	6.74342573542441	0	1.37091542268611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100952220-4	9.59404420313608	-0.531307867462232	0.572964757474194	-0.927295894784876	0.353772925204409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44759453562714	2.88643184345611
Merged-chr19-17250192-14	103.065337459077	0.23541841520997	0.278924084264246	0.844023261135603	0.398656407353326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.7398175616542	6.11656718475766
Merged-chr5-92509042-5	29.7798141289747	0	1.33421371463304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30196462-7	39.3324751976534	-0.892593200386105	0.396832012039106	-2.24929736842436	0.024493583144726	0.369333338741793	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36149582334813	2.94193735700516
Merged-chr8-120110440-4	10.2462039246901	0	1.35144353877993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50567601-4	13.2721815645164	0	1.34248740668146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42576218-6	15.9182440668487	-0.438359830307688	1.08646695836978	-0.403472767331497	0.686600464619931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0.67591700901439
Merged-chr8-26888289-4	9.0844232821813	0	1.34960620133531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41429372-1	4.48812712485134	-1.04087587489157	1.16404143435143	-0.894191430111351	0.371219476703012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.724326877898254
Merged-chr7-35167156-4	8.04222197357632	0	1.36511640518407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91195273-4	7.88010439988378	0	1.35859548811625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108997451-8	27.3029663967719	0.415422737606586	0.356165901502985	1.1663742538338	0.243463163315737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67705801497559	5.06908943248112
Merged-chr8-79372855-6	18.2112635595657	0	1.34631501115041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-52284759-3	11.0593233245404	0	1.35506743836225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115989245-3	7.08017404993628	0	1.40980598549573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54902742-4	14.6977827465214	0	1.34744858008168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33352136-4	9.93813462016042	0	1.35029729036131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105662866-5	31.2495850495115	-2.76792810729381	0.52810097490675	-5.24128573665777	1.59461564208475e-07	2.59526082898457e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50349554388041	3.02305153286915
Merged-chr10-84516569-4	9.67537182072381	0	1.35795442850146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22348736-2	5.89617291988119	0	1.36355239887425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29148140-2	5.83346225894767	1.62673608838241	1.01089782179416	1.6091993209514	0.107572764858278	0.954013110300358	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.5682414637086
Merged-chr3-61416699-4	7.58689431189418	0	1.34700252371101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101697006-3	6.89550559133717	0	1.37156196687417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109255204-9	84.447747828399	-0.189629106532899	0.245218599028591	-0.773306377591648	0.439341082289389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77350742537882	5.56940812140569
Merged-chr5-3432768-2	4.539406319031	0	1.39173378017036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-49116656-4	10.0855960619222	0	1.36947378085949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59656818-4	11.2561255044483	0	1.35180017074591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72742578-3	6.13089685683107	0	1.45259820514429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81338773-1	2.95971087479105	0	1.41022478473516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128760159-3	10.5888537517402	0	1.35463783350248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21806659-4	12.8782471506311	0	1.34352822871536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111036371-2	4.33335520891865	0	1.40382633949033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77832772-4	7.92237808866146	0	1.36147042018887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109255374-2	6.8063987477364	0	1.36729745309146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107271019-4	9.5352519486037	0	1.35358332082726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75171434-4	14.3555645377395	0	1.359654805344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-37689455-4	18.3793171529661	0	1.35613561241601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100405687-9	43.7320717692213	-0.193098886076141	0.244537744760195	-0.789648592962624	0.429733021178148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84049067250327	5.70732750926167
Merged-chr11-46785168-7	36.912135439131	3.29488420460138	0.611053067850803	5.39214084333159	6.9623161366193e-08	1.27001524453184e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	5.03696868644477
Merged-chr15-91186483-4	8.86937515553978	0	1.36168818233438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86541730-3	8.25291353946604	-2.30469297336825	0.894342797633777	-2.57696822679841	0.0099671111981493	0.200593186827174	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03824771725394	0.723581231604105
Merged-chr4-135440199-4	11.382278267304	0	1.35697259098624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122415585-4	20.2777142350266	0	1.36009289576935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76363834-3	6.74795216297699	0	1.35803804479377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3391570-3	12.9593074608586	0	1.34632728055356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97592068-3	6.62454394725178	0	1.3648091457126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10985520-3	5.1343677376702	0	1.39943001498295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72838442-7	31.4865825681835	0.270379734808564	0.338403411142292	0.798986434255754	0.424298278082804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38519407252551	4.75176501780991
Merged-chr7-81578069-4	8.31191250476163	0	1.35123905130603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102832506-4	10.549801604163	0	1.3489809321559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17734280-4	12.4338405666008	0	1.35236951370384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70391885-4	18.6644892541977	-2.47458255997861	0.586770253113902	-4.21729381618508	2.47251721376244e-05	0.00185897044568344	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49713989306758	1.62069611143677
Merged-chr11-38123976-8	27.0451375100119	-0.522911374419498	0.362950868095492	-1.44072220343036	0.149663179551916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29672819785438	4.72908160431994
Merged-chr11-3189130-8	32.7979750097259	0	1.35157556849693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26604489-7	34.8841055530075	2.27454819313609	0.521539883565845	4.36121620763626	1.29341478427862e-05	0.00108668831929832	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62559269623071	4.58738258956978
Merged-chr1-152913829-2	3.46019653533209	0	1.4261975713072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159587289-8	36.7988984828433	0.108736467406297	0.382497606479655	0.284280125062903	0.776195715999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29915574172033	4.55237968561322
Merged-chr6-31085090-2	3.40792376746886	0	1.42058253813006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37523895-1	3.96864649794124	0	1.387223882428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67608368-4	19.9650863322713	0	1.3866145687925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57361723-2	4.59707207922618	0	1.48256077436027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45652570-2	5.7455996456778	0	1.36594728587069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45455771-2	5.52402946026882	0	1.38030568010318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97787779-8	19.1702762952737	0	1.33558878472092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84627493-5	19.9579679885646	-3.24112844449239	1.07332439646666	-3.01971002910403	0.00253016796768793	0.0745864428175425	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30929522906377	0
Merged-chr9-21463965-4	6.60319079814362	0	1.35964606852456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135669993-4	8.95028421423863	0	1.36442220582953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60608976-4	10.2301967041182	-0.831595364231313	0.587822743598339	-1.41470430208387	0.157155212494974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21277539835149	2.13118170172995
Merged-chr1-138343634-3	12.1023100690579	0	1.35519455302834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74040136-3	5.41614028717209	0	1.36068471498897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145746520-8	47.4949560695227	1.28586418920768	0.504803631786624	2.54725621655433	0.0108573684054809	0.212242076193552	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68957347254287	3.75699817050938
Merged-chr15-93519044-4	12.1597999029924	0	1.34821157601034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27289209-2	5.75432424838524	0	1.37604066876236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80998042-5	13.7583117635857	0	1.35492381412915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45767218-5	22.2405888907943	-0.787258644718945	0.506579798782245	-1.55406640101207	0.120168578640829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09670088589278	2.54631039206261
Merged-chr9-116183348-14	85.3634484285848	-0.239296170318763	0.225640255417318	-1.06052073853661	0.28890776030302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.58131094122853	6.32269985384233
Merged-chr17-30507007-4	8.22940054688304	0	1.35746520540881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122407834-6	29.5676960695606	-0.12231323008061	0.50739209025629	-0.241062547937688	0.809506639309774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79125162590996	3.10855097867192
Merged-chr8-66492019-3	10.3375402201517	0	1.34956912670613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14042907-9	50.2360658950161	-0.638879602788705	0.304034687155147	-2.10133787288123	0.0356113174108414	0.47341540795694	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53687282245996	4.86352677883878
Merged-chr5-4962155-4	9.10932599895608	0	1.35205495869293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52036546-4	12.5339983343287	0	1.34959224263744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57850051-7	34.2869340032385	-1.51433058762691	0.32105638387693	-4.71671227757738	2.39686271993439e-06	0.000267538112100438	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9104462181399	4.37885192481087
Merged-chr11-6169465-7	25.5391881678432	-0.191134914925482	0.426613851894088	-0.448027915823356	0.654133049835086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23120019216105	3.88039586552796
Merged-chr14-56034628-4	8.96649305648114	0	1.3559137982787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117177508-4	7.36231987103911	0	1.34877529827861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97129293-4	7.10910967252423	0	1.35585682635948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86750230-3	7.92258196335561	0	1.34617948400937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31718243-6	26.9638810464401	-0.131319205315764	0.526373371876161	-0.249479195438213	0.802990131875051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01226245848961	3.84583407763612
Merged-chr2-77275299-2	4.37837149130553	0	1.38342190093767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36669711-4	12.0837275285129	0	1.34750744052451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66405940-3	17.9685121010798	0	1.34482345832269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135446175-4	8.54522267418881	0	1.40801571298768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122430126-1	7.92249899578788	-4.46653727449546	1.11747025188981	-3.99700776547909	6.41481974611785e-05	0.00406413970372051	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06605598527381	0
Merged-chrX-159704775-4	9.40961663151665	0	1.35174645793144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21175787-4	9.94004064501658	0	1.3507302716226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136811569-8	46.8495957187038	0.143513526182963	0.272397817318114	0.526852702403866	0.59829588113993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42918566591047	5.59637876700415
Merged-chr13-18808493-7	18.3093733688174	0	1.33935018473877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14642620-8	46.9827682230442	-0.00843056879499751	0.335918372926186	-0.0250970755828531	0.979977532795754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57983984017819	4.45199257858176
Merged-chr2-84455373-3	9.60388919341247	-0.697976146874751	0.608247470733792	-1.14752001522129	0.251166765795446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55165473412136	2.98893069743324
Merged-chr2-128065722-3	9.39109779565041	0	1.34824894815003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59964808-4	11.2717813188489	0	1.36755977437325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7992814-4	14.457222315784	0	1.39208755472568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36320133-4	8.59043477484607	0	1.35123073842722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59231799-4	14.315240211689	0	1.37383717226882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85574995-4	6.39374831213236	0	1.38068141128607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130916863-4	8.50235483258306	0	1.35151214059068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96133498-2	4.29040104678193	0	1.39450230808478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3651680-6	20.5632921315181	-0.462219068515029	0.521026119987252	-0.887132239217371	0.375007708655517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71559183919148	2.76033683272617
Merged-chr11-115660575-2	9.39267671820932	0	1.37580885447025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-135601849-2	3.93405637568736	0	1.46790613480835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28417700-2	7.51792124199537	0	1.40105059707276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119869101-2	6.22174053327485	0	1.38182201597992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106972075-6	20.0586184491124	-0.0947441943267426	0.523047550824215	-0.181138778257245	0.856258647376007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67574524889087	3.48500689232594
Merged-chr1-161376455-4	12.2215359899461	1.07344220946804	1.00741344960954	1.06554286116003	0.286630340451847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.33175291456033
Merged-chr8-79150719-4	12.1101254559375	0	1.37726255747615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152881082-3	8.95842855116659	0	1.36141644852763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83408347-3	11.5177350973055	0	1.35492776157574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69257983-2	5.07482607447055	0	1.40454447109485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167166603-2	5.64391556452223	0	1.3545115431343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84706879-2	5.66471405692576	0	1.39283195235238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4618124-4	6.5094115031214	0	1.38985105057883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5841675-4	11.868941981691	0	1.35166569749219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61415492-2	6.13474124447724	0	1.36969880602448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107763849-4	7.45091637823885	0	1.35255268827249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121352489-7	33.5499231277033	0.322138104546211	0.356886420838128	0.902634804063678	0.366719748497736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81013021070994	4.88790186969855
Merged-chr19-47441750-8	38.5710638597959	-0.02258190173172	0.319718393795843	-0.0706305992083137	0.943691756574754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19983652964804	5.31710236457775
Merged-chr17-27571430-8	32.5678378764132	-0.127694891975989	0.330920787406977	-0.385877517627642	0.69958738187114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82916576972337	4.77470491496171
Merged-chr9-90109550-3	5.92417322879715	0	1.37155745599137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70552021-4	11.4887290510558	-1.82016247639351	0.51578491398484	-3.52891763027991	0.000417262983991813	0.0188932601045749	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33212463179429	2.49218206912619
Merged-chr4-99179667-6	39.4469521852822	2.15943524095457	0.389917039283351	5.53819152126184	3.05610957988574e-08	6.17572716182188e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04139222284796	6.09006837135292
Merged-chr10-108158001-4	8.15863840591415	0	1.37536874014082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104574768-8	51.2487606775727	-1.09061440548022	0.290618879648796	-3.75273074756257	0.000174918699480217	0.00929462911539111	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83216568430632	4.74290703055229
Merged-chr6-99095750-3	4.58351085258449	0	1.39260160707136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55520693-1	2.41217883728763	0	1.48383879722067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83860245-1	3.66004981674604	0.917155451918605	0.960107004931134	0.955263785398994	0.339444316443964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	2.46652732427062
Merged-chr14-32770641-2	4.23729343386149	0	1.38599173205754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6485173-1	2.4193367210944	1.77523801332567	1.37701334344414	1.28919448876617	0.197330480547523	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr17-23960547-4	12.046179164282	-0.41938238000389	0.537518248684864	-0.780219799104468	0.435261510298219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5751510047836	3.26727139169409
Merged-chr6-57770630-3	10.6675179674544	0	1.35512681480299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63923676-1	2.62292796603108	0	1.42896521296457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161920583-1	9.11435530053601	-0.485959337584604	0.721846972865235	-0.67321656230777	0.500809525889713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82733777484472	2.40465811946334
Merged-chr8-35683710-1	5.68691467820616	-1.20157463002097	0.823263807400321	-1.45952563348469	0.144420490693157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40117191498704	1.62438888480879
Merged-chr1-21161938-1	2.85028328634805	0	1.39991383054357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-21094968-4	23.8471895118365	0.514265944898368	0.691590405825549	0.743599015496014	0.457119099020964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00182956598795	2.2434857155036
Merged-chr7-19318776-4	12.1225641063282	0	1.35300131854137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81400866-3	4.23553384045861	0	1.42214196559218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95547276-2	4.95000692779651	0	1.39151835780939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65565839-3	7.17025476087008	0	1.36109493084551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113761836-4	10.4700362464447	0	1.35112593542659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102517216-8	23.4114915861271	0.402516795796597	1.08064236130616	0.372479194050915	0.709536100114806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43950205220436	4.4373437691751
Merged-chr1-87901133-2	6.53985196828445	0	1.38579273663368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68212230-7	30.7346658924219	0.111525250474917	0.536879367023049	0.207728695355374	0.835440810725501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04469982910024	2.59525312835497
Merged-chr6-100214765-3	10.3231525257377	0	1.3500884436981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137951982-3	10.1308722092036	0	1.34538580728898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60899448-3	12.15398871352	2.86584900428896	0.899025941916478	3.18772670583871	0.00143395998517846	0.0477333930399974	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.47009143066183
Merged-chr3-108990364-8	30.4397195546523	0.317598740758374	0.46851236243198	0.677887642302042	0.497842935908327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3890770318399	4.55983354680707
Merged-chr11-94031448-2	8.59201484886918	-0.874640457666341	0.619337260705082	-1.41221998603896	0.15788519747223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42284171238658	2.39933682076522
Merged-chr13-37489449-5	31.7752052463115	2.70040989234419	0.51550291408739	5.23839888883034	1.61975676688191e-07	2.62527961812503e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52137828747792	5.54404684231629
Merged-chr17-23546901-18	83.7275747273146	-0.285816360443953	0.22064185325965	-1.29538596699333	0.195187116524604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.79216742685533	6.43355092511517
Merged-chr2-167055799-4	10.0202465859188	0	1.3509974981738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70834608-3	22.6326286150143	0	1.36729785864262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72820804-4	8.68694761215863	0	1.36068511748222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26696886-7	36.5577022520316	-0.00484947242262442	0.342331399193042	-0.0141660170059066	0.988697531766604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74351278562112	4.71822973796613
Merged-chr13-9418798-4	7.09839290661918	0	1.34687416336964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21321765-4	8.18119331180747	0	1.35399600767704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101259303-3	15.9588668427023	0	1.35634065294023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44385346-6	20.0525969583691	0.214883369602904	0.44882289057505	0.478770967602804	0.632101572633441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31463781495015	3.72529791458837
Merged-chr5-3387392-4	15.6007020133948	0	1.35346460002549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58540568-6	21.1216426743582	-0.731312673397803	0.511575148846728	-1.42953127228022	0.152851593286264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24109773241947	3.34550071070071
Merged-chr5-150599710-4	13.5345899900858	0	1.34413929766604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63254069-3	8.5870999076264	0	1.3651117777098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45974007-4	9.16324964610486	0	1.355695467353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41482526-9	38.9056067666684	0.479688435286851	0.347993538626751	1.37844063766182	0.16806728391912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41323808252702	5.07320386636367
Merged-chr18-67988774-3	6.85107391389964	0	1.38110479686234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19416713-5	20.8512522016521	0	1.38011030210108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76458955-8	31.0112987320505	1.09408459937987	0.331335504379139	3.30204455882258	0.000959828211625593	0.0347372182128866	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26283911907934	5.44338122661875
Merged-chr12-75687647-4	13.977986554548	0	1.35136866132232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97479749-2	32.9010050453116	-0.384241849325586	0.368825535144952	-1.04179839168287	0.297505159972062	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8065437573397	5.49976654118933
Merged-chr9-40758077-12	59.5886397787244	0.322875331474698	0.223492180388229	1.44468290082378	0.148546974989923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.1402345541937	6.47111706333608
Merged-chr1-131188693-6	31.6281339179093	-0.566414426825219	0.515860433012148	-1.09799936296312	0.272204767442485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75541628522075	2.40008246705937
Merged-chr2-26516474-3	4.12828897205902	0	1.40672519818721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60978511-4	7.89591161133427	0	1.35411096357865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50196134-3	4.99305746749658	0	1.42875431023148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-111079816-3	9.18561033419328	0	1.42155278248183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98227248-4	15.7801923521189	0	1.34977928583693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17967446-4	11.0912468311985	0	1.35632538323805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19682721-4	12.2680905778628	0	1.35530064154835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40743759-11	67.157968879175	-1.00809301086723	0.269402397172823	-3.74196006214647	0.000182590538137486	0.0096234207663318	C57BL6J_F1_Control-BALBCJ_F1_Control	6.6920360800497	5.69173612261433
Merged-chr8-70864841-7	34.1099765567095	-0.35260087616578	0.412247306405498	-0.855313960060063	0.392377361220893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2064293094022	3.74013420186108
Merged-chr19-10025699-4	8.46762119799689	0	1.36266156666306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105990458-2	9.05951648861577	-0.0416137886257225	0.844241617164937	-0.04929132582384	0.960687132106543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01555752371922	1.99444293334951
Merged-chr5-115490075-11	86.7975913779454	-0.277775777205825	0.244911910889226	-1.1341864762611	0.256716335556525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.40777979454102	6.11983582311901
Merged-chr4-137373869-3	14.0364257000694	0.134344632146281	0.503038476307787	0.267066314951387	0.789418102659668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71871892516176	3.63903970632938
Merged-chr14-26814069-3	7.92940410430875	0	1.38820953595713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96767239-4	7.14762864428923	0	1.35992501220697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38997248-4	10.593482694693	0	1.34739574544865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57712865-4	6.33853004121851	0	1.36730955978513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51677985-2	5.91753334717806	0	1.36180012375754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128766979-4	7.31650386445562	0	1.36269489835544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-17637442-1	3.79375869492602	0	1.4403054301339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128925174-4	9.17323824579416	0	1.34744251824383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58627398-4	8.39715531375443	0	1.35761745484445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123009036-4	7.94868545682929	0	1.34972692704506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22631697-2	3.34668985597927	0	1.47267334211881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24609721-2	2.22344815262778	0	1.52220822264105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145832087-4	11.4921766120165	0	1.35181835778603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9231658-4	11.500055817609	0	1.37531264436994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24766583-3	8.67840544843246	0	1.44986921306831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89858347-2	3.87349838271095	0	1.39202314400528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125383968-2	5.0517413333298	1.90796301633526	1.29539983140295	1.47287576397852	0.140784538236634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.21849460895724
Merged-chr14-70927566-8	36.9489122595965	0.170495107056718	0.353611348015387	0.482153946737306	0.629696589437898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59949561735258	4.68591893105909
Merged-chr8-27058454-4	10.5968421334655	0	1.35328794640204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36817517-4	7.56903603067186	0	1.34638101723842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138928964-4	8.19323517354144	0	1.36459252174488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57191041-4	14.7521839976719	0	1.35939380881339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110747633-2	4.97875382081273	0	1.3850549392843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84890109-4	8.10889212354597	0	1.34827871772398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22003089-4	6.96682709614883	0	1.35526611877268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133758588-4	13.517834936905	0	1.38039351643529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32635047-4	9.9379944962062	0	1.34762806982248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5792672-4	9.42575044053131	0	1.3447686426484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105121303-11	56.4942507759843	-0.178248412937775	0.251491705307474	-0.708764580206923	0.478470581304694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.34715383438318	6.02072133545596
Merged-chr3-136703079-4	7.66868642267554	0	1.35645984226025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120352846-2	8.54281330891492	0	1.36345110584753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111495858-1	2.82538926559061	0	1.44321733553559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6145012-6	17.2068348592313	-0.347195230430346	0.509850770500998	-0.680974219356733	0.495887803407751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95279351798222	3.20134887760253
Merged-chr4-134918615-3	7.15578100790184	0	1.41064467490963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11843648-4	7.59732205064254	0	1.36734706698264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3142569-5	31.1061809692686	0	1.36582048872832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48561043-4	12.156859895047	-3.24142947110011	0.709662615492907	-4.56756407951506	4.93424858295332e-06	0.000493052975589631	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58330110212014	1.30139522650344
Merged-chr12-100831198-4	9.46247117259484	0	1.36323131925031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71223068-5	11.4686238404688	0	1.35326736359294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27625389-3	6.90408945820463	0	1.37426242116715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14758838-6	31.7373833674557	-0.0371267295969462	0.501023316423585	-0.0741018000159453	0.940929382995369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27620127671797	3.24109391782928
Merged-chr9-100440394-10	46.4921267508037	-0.137522777806201	0.370927250629145	-0.370754042936838	0.710820733961985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59982408074952	4.22525953128308
Merged-chr5-122379940-4	8.5771987233287	0	1.36036947929971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115848211-2	6.88521366342094	-0.76179657147022	0.743523651653922	-1.02457611102976	0.305563241185405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21973468539322	1.79957942362569
Merged-chr7-49923168-2	3.51316274918391	0	1.40826494991566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24777255-4	19.3813135981381	0	1.34179406781983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-70546392-4	10.2340125362408	0	1.3616057831306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62559120-4	13.7514143814989	0	1.36110258821341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79456659-3	14.2700125719963	0	1.34763884445428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163297396-3	6.07522107285444	0	1.3773636066748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125617477-2	9.29995232004294	0.259732823814163	0.882219209486388	0.294408488300062	0.768445781462796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	0.993299420549897
Merged-chr4-139208475-7	23.5548254891987	0.996406720941937	0.448262068574147	2.22282185086807	0.0262278150606992	0.388478964273719	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2164724343325	5.49482684752791
Merged-chr1-132133670-4	13.5690062583842	0	1.34892318014308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34633668-4	8.5675171277104	0	1.36101516446077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167342032-4	9.46512698851142	0	1.36323127828373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103115556-4	16.134655913863	0	1.35179560887713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122007877-4	8.51262363929321	0	1.36855116834942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118638086-6	42.2566726626276	-1.09771393935421	0.48474220967594	-2.26453136830822	0.0235414527053211	0.360685414107352	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3446835389515	2.60269977135712
Merged-chr7-100991111-7	23.0323616928315	0.959243228798603	0.54301090386517	1.76652664241303	0.0773075358610113	0.777926757102686	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82431113536981	3.44477536718934
Merged-chr13-76256572-8	58.4830684373394	-1.54951827595464	0.271821903023544	-5.70049086817123	1.19462932458052e-08	2.69455831762957e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	6.85890757583976	5.3190709292684
Merged-chr2-181410857-4	10.0118608204653	0	1.35510488667226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84172476-4	11.6967416317599	0	1.34767956239226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152585764-4	10.415817394828	0	1.35526968703283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110684571-7	35.3136931076086	-0.722102010016781	0.446518629168651	-1.61718226932933	0.105838942467682	0.945022843889734	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88872003537756	3.20553275563311
Merged-chr6-149261013-4	17.9590037733214	0	1.37775100857343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117731433-4	7.44168950645289	0	1.35145956434894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-124071781-8	38.784714362661	-0.26106421589675	0.480409842518299	-0.543419790336219	0.586840802766734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74671264876395	3.4977696775069
Merged-chr2-90575249-4	7.27289629512283	0	1.35426510528257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121571740-2	2.77379956830737	0	1.55300594123236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145743224-1	3.26503272704415	0	1.41387090367554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43218294-4	12.768272729508	0	1.34229817922719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82941640-2	5.73850956130198	-0.342869967061517	1.16460170660786	-0.294409638175952	0.768444902906847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29072512625674	0.724326877898254
Merged-chr10-71356326-3	9.08227817906639	0	1.35679542538852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56174753-1	1.62859132309095	0	1.69406955188373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119677343-4	8.08701056087428	0	1.35042521874663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93862675-1	2.71050780390093	0	1.4313755581345	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36576351-5	36.1354719182809	-0.286309693314699	0.575390170290244	-0.497592256694749	0.618771462590575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93171244472175	1.68067998093129
Merged-chr11-94133483-4	8.6018620968561	0	1.35753410366323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46832136-4	13.2588641794162	0	1.3476756759461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-159274439-1	2.77353821466532	-1.60746165055901	1.3292609905198	-1.20928971964371	0.226551559016328	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.376242425970964
Merged-chr5-74774729-1	1.37216012638026	0	1.67211920285077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120077188-1	2.78120163247477	0	1.4128392717518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106672251-1	2.64225038840804	2.18875743378767	1.37866684520295	1.58758980924465	0.112379124090494	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.60650301571838
Merged-chr19-46645740-1	3.95629139847705	2.89665763179935	1.22447111100219	2.36563983075806	0.0179989449374063	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.71450075940727
Merged-chr1-185279351-1	3.12149114637125	0	1.44143474896614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64156018-3	11.7440617904109	0.359096759672339	0.691810584213124	0.519068033746233	0.603713298945721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99642079673038	2.41307516068939
Merged-chr13-113465274-2	2.41246039393991	0	1.71100709159313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152121798-1	1.2391313482695	0	2.31846051359784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54972874-2	2.52268870933153	0	1.40584349651721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9874176-2	4.38233031428593	0	1.37336650428356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144714804-4	19.6806160554328	0	1.36961039076978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84772040-12	82.2177196616465	0.127589659286653	0.252393131904267	0.505519537413753	0.613193979615204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.36486455994881	6.44582336128631
Merged-chr2-84623895-8	40.6914144770327	-0.311129096585737	0.339037384755986	-0.917683743961347	0.358784460674461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68842369727784	4.36313129322406
Merged-chr19-46864300-4	8.51481381458006	0	1.3532363418648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83659542-4	17.751972976842	-2.50258632718012	0.595040377623114	-4.20574203245952	2.60226927606128e-05	0.00193246933848928	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93744572927802	2.04190387384795
Merged-chr14-31402827-4	15.9191771773587	0	1.35213113344825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11100533-2	5.03084290064977	0	1.37013799158293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131110987-5	53.065663589262	0.811775319303671	0.630689187379441	1.28712420562759	0.198050999825921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	2.95574075890884
Merged-chr16-33624914-3	9.04693217987398	0	1.35607353029597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107478180-4	7.71405045385747	0	1.3686151124381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78790593-2	4.92108091189787	0	1.39949558939897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83103254-9	43.6183971460762	-1.05092450397494	0.271709482675311	-3.86782416876771	0.00010981079689452	0.00635021820041403	C57BL6J_F1_Control-BALBCJ_F1_Control	6.44140318159246	5.37146881230836
Merged-chr19-21319762-2	3.88412262073257	0	1.36986062202213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54303484-4	11.6764269165253	0	1.35104384136939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35380152-4	14.5988952839713	-0.146122792029177	0.49263990143316	-0.296611767751831	0.766762925622423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92518750530999	3.80965807359754
Merged-chr3-22010095-4	11.3784991685872	0	1.34847097295041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116836181-3	9.44802092381538	-1.49110696992843	1.0847030967411	-1.37466830730763	0.169234301025588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.55634759613363
Merged-chr10-95298670-3	11.2486327745488	0	1.35675339627183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81290751-4	8.27784493807305	0	1.35046115067666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71296209-3	7.01465283511574	0	1.35740967868813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145307604-14	127.353665368963	0.405268170672842	0.195810648350451	2.06969423821893	0.0384809866625575	0.495649741750876	C57BL6J_F1_Control-BALBCJ_F1_Control	6.75603512795958	7.15137891983549
Merged-chr6-38676880-4	11.0736703494816	0	1.34445838588567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113680234-3	14.2408688070394	0	1.37323880290451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117519143-4	11.7182595567067	0	1.34801086735323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46806970-2	7.10690877515987	0	1.35571047356673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-108140940-4	8.46570635312844	0	1.35487119978832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3133035-4	17.8987438800327	0	1.35518577439856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9857750-4	17.6468465757458	0	1.35354854295236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145738122-4	19.7412452554957	0	1.35554365388716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36614659-3	6.02989176416865	0	1.36511480458926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52655333-6	24.0682639974153	-0.651054006860509	0.460945026791389	-1.41243308641913	0.157822480076699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.7665358575271	4.93007851280408
Merged-chr2-165453566-6	18.5932601091631	1.66868252487027	0.825441582522156	2.02156343974285	0.0432214722581279	0.533673248258262	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	2.3873276010566
Merged-chr10-8757194-8	37.1015279119677	0.671340613273515	0.320206071651625	2.09658926768857	0.0360299501519514	0.475492124377258	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13156420331452	5.82193781358365
Merged-chr14-62354577-3	5.52345576511526	-1.42994308904203	1.08080318422878	-1.32303745021105	0.18582292395752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57167815999277	0.724326877898254
Merged-chr4-129877412-8	26.3165592813836	0.132977557128179	0.293917234612662	0.452431982436903	0.650957811029393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04293040230255	5.15593011089448
Merged-chr7-97027032-6	35.2876057850545	-0.507602783852588	0.348367030771063	-1.45709191460822	0.145091009970817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71370181567302	4.2627394901949
Merged-chr13-23778568-3	11.5669581800026	-1.71206944463933	0.685613102100334	-2.49713641614274	0.0125200782244085	0.23598437316249	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49279102298918	1.338064021838
Merged-chr15-95962591-3	5.60651108887523	0	1.40694381922229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77506710-3	6.85468577503732	0	1.37261354997142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-91457390-2	5.03874743993428	1.48924814397346	1.22246240199	1.21823635765744	0.223134167008451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.97908007631626
Merged-chr1-74808308-4	8.22244887319312	0	1.35901490554512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16651239-8	25.8510419701302	0.0246728862062022	0.36141236283917	0.0682679640850629	0.945572325570399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05929468548237	4.05144652870782
Merged-chr16-31803888-2	3.96521883926047	0	1.40582667023095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79284182-4	8.32384031814775	0	1.35060427791798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72172945-5	13.1839940978495	0	1.35584402478589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61839541-3	11.1115556261275	0	1.35225216552464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135368398-3	8.48326553128348	0	1.3490877653207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121613891-6	14.3070742424748	0	1.36122508705379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95635885-6	60.8590675582431	0.0632583368835945	0.298077969140408	0.212220772524779	0.831934801684483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75318206306147	4.77234745680239
Merged-chr18-61489314-5	19.2713755852515	0.857669524789567	0.47729855177958	1.79692463258435	0.072347585492028	0.747385480760386	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26847285322946	4.33530104218203
Merged-chr2-155762166-6	20.547395658822	1.28262157335112	0.838184021429527	1.53023863562038	0.1259576712904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	2.23655663346752
Merged-chr17-26529551-3	19.2229783971822	-2.16284757104485	0.472248111622712	-4.57989670644313	4.65205623452831e-06	0.000473120327225403	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48637819355029	3.1880353339785
Merged-chrX-102033734-4	10.1170993458278	0	1.34472808281808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150474972-4	7.65079703668298	0	1.38253318546145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83306959-4	9.56698593065036	0	1.35467935315036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66143117-4	19.4965732441177	2.53715356179281	0.674975877870279	3.75888034665502	0.000170675431105026	0.00911369917430071	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8834919615147	4.65813252269644
Merged-chr10-25279530-4	10.3963257776969	0	1.35053616518041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64748076-3	11.391120806375	0	1.34945587893836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124150190-5	25.9568346286272	2.82797292125984	0.495727830376789	5.70468863753397	1.16555949451494e-08	2.6399436900974e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87271081946269	5.58066505289133
Merged-chr12-33434037-6	34.8439978162129	-0.306716424750563	0.4210262211844	-0.728497203541697	0.466309279885268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70128464298507	2.90365937304917
Merged-chr11-119394505-6	19.7615908558389	-0.159955624076957	0.579528273024992	-0.276010043896613	0.782540351866333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74833268732204	3.07603289167899
Merged-chr11-51918133-5	10.8012414702826	0	1.35748121537279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79182504-2	3.15505304764479	0	1.46239785643422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4067264-2	6.06801835691363	0	1.39046859736466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101373686-2	6.37422494080681	0	1.40124895269321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12087587-4	13.5011044821466	0	1.3480797124043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51957091-2	3.66400040057857	0	1.53321090968979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66494980-2	12.558651801031	0	1.36068717578737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85552108-2	3.18087338013005	0	1.45856602689941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82171947-2	2.1080384000086	0	1.70290002011026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55756913-2	4.65990325721722	0	1.38885953737422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129760026-4	11.0535148460898	0	1.35705852034272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102883125-1	3.29322735500985	0	1.45524400267752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143047727-2	3.2367719649234	0	1.41151417701182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71004043-7	25.181280544889	-1.48249474993232	0.64510702909599	-2.29806014051619	0.0215583664560982	0.337820406100682	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20604946077159	1.30281892590853
Merged-chr9-40325176-4	8.98595723139962	0	1.35575392384838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139203550-4	8.832770347146	0	1.35869853488633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93357395-3	10.3306796779363	-2.55770404687982	1.0149587915006	-2.52000777597905	0.0117352241804956	0.224459905428416	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76501444179017	0.465515277017237
Merged-chr16-55951162-3	8.20944739150155	0	1.34654990492221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29950605-4	6.73521314577324	0	1.36685800108715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21202318-4	9.15448354200469	0	1.35425995469274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101649059-4	9.77204761740697	0	1.34160908195044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6697342-4	7.08980494111174	0	1.36983217094159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30974744-4	7.95486653175853	3.78150194178674	1.07527055163496	3.51679113320542	0.000436797349351348	0.0195422774595802	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.78597213134036
Merged-chr3-89905624-2	4.83108715718009	0	1.38813394826153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42354356-6	20.8694516637892	0	1.3461598148759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83277573-8	24.3863932287445	0	1.33718764201609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55182800-7	35.2260882973663	0.65580594673959	0.42939748691543	1.52727010921876	0.126693858995486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75386073521305	4.41108955078882
Merged-chr11-108079636-2	4.69962273306901	0	1.36477921985606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127590427-8	30.856023490152	-0.0415548972454183	0.340533154073731	-0.122028932420545	0.902876104738658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69545245342952	4.75373251654355
Merged-chr19-37474551-2	11.3573478070034	-0.228506334669565	0.49762177788407	-0.459196813373389	0.646092838716871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85099806448001	3.52577253548664
Merged-chrX-9489571-2	4.90061282843435	0	1.42671678348092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88452603-2	4.11887788543527	0	1.84638279261506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27938500-6	20.5433695578484	1.35098966086483	0.693730269068976	1.94742787088984	0.0514834593731256	0.601717774255801	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.99532585549162
Merged-chr8-46928900-3	8.27026597476459	0	1.36281220264669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58246234-4	9.91324547504001	0	1.3511864997499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123563756-4	8.39531133902599	0	1.37439175472933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43265380-8	25.5482761036931	0.330604498097691	0.319027720347172	1.03628768602904	0.300067949212984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8860411895151	5.20201535949399
Merged-chr16-87688987-4	15.4852215173214	0	1.34711326288424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62448282-4	7.45540954550204	0	1.37157359049439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54758170-4	6.84788551578318	0	1.35218135335861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120881244-8	39.9917316449625	-0.329776493139441	0.315830589823256	-1.04415627797165	0.296413091712009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77702842310616	4.44966397157467
Merged-chr9-89237327-2	4.6644010154287	0	1.38849003353235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63411690-4	8.52458205835915	0	1.34595707349226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113645913-4	10.4834776762352	-0.202125988333129	0.861136087440171	-0.234720146189637	0.814425950117427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49176722630688	1.39207274064238
Merged-chr7-80179532-5	21.8219929452749	1.92809951492245	0.483554569359041	3.98734628333298	6.68164676497107e-05	0.00417480041950646	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04244383180092	5.15773369367111
Merged-chr5-3787705-3	10.9178261939844	0	1.39358213432218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96280429-3	6.16335658004638	0	1.35826372216128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108104622-7	35.7579278967972	-0.223978131456517	0.33020448693068	-0.678301296080016	0.497580677075465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50229242479979	5.20221915868261
Merged-chr2-158076851-7	32.3155148669339	1.24319074047711	0.440560957207106	2.82183593470968	0.00477495983694661	0.11917449117382	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16949950908321	4.57488761477498
Merged-chr11-34773729-4	11.5650045651172	0	1.34531617807348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8861119-4	9.77333304870933	0	1.35990330213184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-71113372-4	14.508247517344	-2.37958617019765	0.610617217845215	-3.89701780535256	9.73844619047854e-05	0.00574779800725541	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68267376768399	2.13118170172995
Merged-chr8-80984090-9	26.2533574992792	0.577412258453583	0.42055072324657	1.37299076314998	0.16975521824824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91491556800296	4.49074128374118
Merged-chr9-40701905-6	31.1016866708164	-1.97918874514097	0.383007169307342	-5.16749790537935	2.37248624933978e-07	3.62263988842306e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80723395964403	3.75016659707402
Merged-chr12-112578852-4	16.7899819279719	0	1.35232088197644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91154141-4	8.44747519359423	0	1.35787453767007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34193220-2	7.0263934510897	-1.54838359602604	0.828827795400145	-1.86816079844246	0.0617396611338686	0.678686802745392	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40329553716061	1.75191520103598
Merged-chr3-65943497-2	10.2906163123943	-0.168401930472437	0.552621002179994	-0.304733135020423	0.760569411043402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.013680092543	3.88695898661227
Merged-chrX-101452614-2	4.45917947342695	0	1.44822272768145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73659934-4	10.2140601416699	0	1.36058716785439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131089958-7	26.8576298794816	-0.836217811371079	0.398526457708667	-2.09827426810989	0.0358809242496458	0.474908975234112	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34577227741665	3.42287038858894
Merged-chr12-17454042-3	8.65214659646788	-0.279220170151336	1.03651323474805	-0.269384085789513	0.787634131373732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.27336184263348
Merged-chr11-19493444-6	15.2565667752111	0	1.35279329970454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78264628-5	11.4091849568147	0	1.34724153615171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5162197-4	9.99383523725395	0	1.3494009094309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84191143-4	7.78524638039717	0	1.34889415360191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88141874-6	23.5944230091205	-0.904397285116314	0.640025932127899	-1.41306350214507	0.157637053447003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35651348678689	1.88210633205317
Merged-chr19-10266648-4	6.15916829728146	0	1.36525769001973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89297478-4	12.0168001814816	0	1.3591297497213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-153665103-3	7.76393760837877	0	1.35997389516681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125393388-7	154.327008559464	-0.0431988262994096	0.34163785552752	-0.126446251785262	0.899378692303742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67263828725516	4.67510618891821
Merged-chr12-116435407-8	37.7278450669438	0.280259545290688	0.33060200947978	0.847724869342722	0.39659121288893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03359755379658	5.32016970497945
Merged-chr1-172335844-9	46.3406531966261	0.172314106255639	0.394456751046353	0.436839034440533	0.662228088096946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74958134170638	4.92560204210552
Merged-chr8-121792333-6	43.0249479837039	1.52455766692341	0.359859021197785	4.23654147073748	2.26989012559564e-05	0.00174278188329454	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86501452460786	5.4078645661791
Merged-chr3-97737836-1	2.50255696360386	0	1.52504242964291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42558914-2	5.91339407898467	2.70078498418764	1.22833906410711	2.19872921337957	0.0278971824294389	0.403974778673091	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr9-58892394-1	2.05443634741639	0	1.47324216177103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102390229-1	3.49337619597267	0	1.49883951604584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103007354-1	1.96411302514757	0	1.49766341870973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54955277-3	9.65725091745226	0	1.36258069685392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99987099-3	8.01254033521386	0	1.37306368361316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82239313-1	2.34279464024121	0	1.56565977860118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105719878-3	11.3715091908631	0.476676633783024	0.945901887746295	0.503938769927559	0.614304405132006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.45165290330136
Merged-chr2-32488851-3	4.90485568403413	0	1.37054676179042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37538623-1	2.75501506095114	4.8475346317664	1.58383998957331	3.06062144135681	0.0022087816611954	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.71046946346372
Merged-chr6-89294431-1	4.47615592849152	0	1.38090140997962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61733713-1	2.95165874731051	0	1.46289180312724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70865786-2	4.17857866831707	-1.69300528040048	1.39544087068175	-1.21324042886415	0.225037911179647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr17-86601294-1	2.19304266053748	0	1.49422067510883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70328521-6	32.6007886952426	0.00783324300172297	0.459610945814189	0.0170432037641023	0.986402149149616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47368332555948	3.40735071507421
Merged-chr18-38144369-1	3.60657986206837	-1.24319525818911	1.35269260778751	-0.919052304294404	0.358068214923428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr8-124219394-9	54.8537346065506	0.184143507496554	0.279137055446172	0.659688507504742	0.509453743222137	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.97285219510691	6.16305007409174
Merged-chr11-64832257-10	65.1448033871702	-0.838494848435093	0.290185315647088	-2.88951508991874	0.00385836488359318	0.102410574564083	C57BL6J_F1_Control-BALBCJ_F1_Control	5.7201061756512	4.86686445035079
Merged-chr15-81101518-10	48.4729622243477	-0.545596303104837	0.277472366096391	-1.96630861220718	0.0492629726007617	0.584053637427439	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30484855412744	5.80149105787829
Merged-chr19-47395664-4	9.21994728973477	0.522480840791848	0.928045103725231	0.562990784278239	0.573441159343101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.25298535761957
Merged-chr10-41530173-4	12.8860134774847	0	1.36159870977508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24641609-4	6.70538488466131	0	1.36022661048737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176832779-10	73.6239473633635	0.677165154490622	0.251462503687123	2.6929070718757	0.00708320084966173	0.157801522535558	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83047188037229	5.59279314231295
Merged-chr14-17885433-2	6.69450672039533	0	1.35596745223654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84597120-2	8.2499280190803	0	1.35560984855614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148645049-2	5.7148314539979	0	1.3693333567911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106212041-5	17.3529485972149	0.136352672343456	0.520745142171667	0.261841467737603	0.793443667424068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91512095232653	3.90145824795613
Merged-chr14-40979197-4	7.02889506356924	0	1.37827818557874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33132082-9	36.7171880479979	0.185062030878577	0.309546598682681	0.597848697631098	0.549940893865024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12212628781453	5.35073260099677
Merged-chr11-44581398-7	51.5354356090974	-1.86025469197589	0.285461385397695	-6.51665965042609	7.18902895389954e-11	2.80796636800129e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	6.3677203962937	4.28099908622367
Merged-chr18-11353250-2	6.46502800146147	0	1.37451031434867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14068841-2	4.64315888777223	0	1.39090859224498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23259833-3	5.33420360620461	0	1.37031702519419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-53000535-4	8.25922011611103	0	1.36429429803407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50181132-3	5.05401235791362	0	1.41732086291028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8358429-5	22.1269647911271	1.08295168771606	0.664048799281769	1.63083148239614	0.102925882510748	0.928623919345333	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	2.66120738378748
Merged-chr13-63877253-8	42.1483047625247	1.20739891075026	0.303816058322924	3.97411156413242	7.06424471426573e-05	0.00437363642850537	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47164051747016	5.72725151718263
Merged-chr3-20348379-4	7.02149692886735	0	1.35434166547488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149220940-3	6.98460897788172	0	1.40627941389175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-93757571-8	38.5626213705767	-1.19473254193452	0.306632439036133	-3.89630185798358	9.76726438297601e-05	0.00575855449668322	C57BL6J_F1_Control-BALBCJ_F1_Control	5.99218745888499	4.82266689344338
Merged-chr11-98948095-4	7.73679079251896	0	1.35848610931606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56506113-4	8.41005850249128	0	1.35732886862674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40702684-4	13.0163444979826	-0.0346899118163462	1.26869830593485	-0.0273429164790951	0.978186227251499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr3-58372593-2	5.4987291638903	0	1.39160787759209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133407905-2	6.01873850879941	0	1.37416563784755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57777257-4	11.5334334190138	0	1.3549902887406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191266754-4	12.8536812919224	0	1.36855919539182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134245853-7	21.9989333645571	0.484725132458061	0.367334737190989	1.31957335743621	0.186977502995329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65225619087515	5.08485489651048
Merged-chr9-13541000-8	25.5648084162138	-0.258238936389883	0.294713903978452	-0.876236013651952	0.380901742034096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14942589460697	4.95666638535387
Merged-chr2-80081518-7	29.7685330854799	0.22592938583579	0.440208603687504	0.513232553710317	0.607788656859152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86307350853735	3.88115440442982
Merged-chr3-135630128-4	12.6291512033036	-0.0382605147608455	0.632620591543899	-0.0604794015121629	0.951773821026146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90512073759599	2.87229616963718
Merged-chr13-30714799-4	11.3796097323611	0	1.35065366410341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152437674-4	6.96925925785718	0	1.36831106440666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32680306-4	8.79006172050675	0	1.35647225397577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163764935-13	72.4799275628885	-1.99353657233898	0.217728387988947	-9.15607096875299	5.38212657942747e-20	1.39317627967189e-16	C57BL6J_F1_Control-BALBCJ_F1_Control	7.33078288682635	5.36695019002379
Merged-chr15-73620432-2	5.05236320122231	0	1.37652461535999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23387144-8	43.0711273106974	0.270710244591356	0.333176217830677	0.812513709273613	0.416496923346223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36307550294095	4.6001538612877
Merged-chr10-10481353-4	10.7173414002982	0	1.3435353120439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17295555-1	4.49494069068518	1.42203429298363	0.859267298932271	1.65493821858536	0.0979370307158805	0.899283623764281	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57612722179308	2.50656502262891
Merged-chr6-98092366-4	7.80290911559079	0	1.35282759876033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6278742-4	5.00360359209879	0	1.41805395345303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80061075-1	2.93987136398907	0	1.42630680092095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-47330421-2	4.46213925918831	0	1.40450485955431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129546923-12	95.6854733703768	-0.217071896867475	0.240844427059523	-0.901295078809639	0.367431449649936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.359232149937	6.05799443675557
Merged-chr19-29448556-4	8.18075903283788	0	1.35228079556162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29925771-4	9.78046253296102	0	1.36437043013699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24435498-4	9.52787636971331	0	1.36375154700651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65505164-10	59.4994467577659	-0.691118396911399	0.222149133712656	-3.11105600711162	0.00186419578308854	0.0590191139038498	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41449223452955	5.68512920409129
Merged-chr7-4228480-8	38.8960446680905	0.338614294178447	0.230159103594852	1.47121833935584	0.141232079062381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06465600309494	6.41450076123528
Merged-chr11-119440465-4	7.99202500134758	0	1.35607121590107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101547808-5	42.1759195644711	1.12426041702334	0.673451111578883	1.6694016799342	0.0950378009482672	0.881814215381216	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29891167103117	4.35335584059935
Merged-chr4-129883087-4	20.6230945361639	0.386562839696604	0.614677676133386	0.628887065052154	0.529422994858796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73752739441368	3.18707015514266
Merged-chr4-6416168-4	8.52938512362474	0	1.35127459609936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191115314-16	109.27952153008	-0.24873741246838	0.26337796217216	-0.944412396606632	0.34495894908159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.92106213418906	6.59439447018749
Merged-chr7-121078002-4	6.87165182667102	0	1.3585223681909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58802638-4	9.50372868972641	0	1.35831642269076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71315501-4	9.76158099470038	0	1.35987839225641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91344851-9	31.2575820425155	-0.0736310959805392	0.307465591450917	-0.239477515624032	0.810735329233279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08505660866588	5.00008032896625
Merged-chr6-81447810-8	70.4029806034866	1.01470756146901	0.305410819652264	3.32243488499963	0.000892354960326411	0.0327975140557021	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02236783450319	5.22348103794743
Merged-chr13-45922661-2	4.06429012706856	0	1.42737109693739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52328219-4	11.7828521473455	0	1.33915546527133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155028882-4	10.8665094130481	0	1.35333379314257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51329937-2	2.8597933444294	0	1.424567812672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25740014-1	2.50914628703834	0	1.41194758956042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-15519936-2	3.4069749351779	0	1.47265762737458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35564116-2	2.60770905239741	0	1.54954455668743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18959227-2	2.80114887240996	0	1.4319054964565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33837060-4	14.6893241230525	0	1.35007514310197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88319170-1	3.18863996390964	-1.79759707965334	1.28148473727679	-1.40274560231853	0.160692713494758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77777167463237	0.662147012823607
Merged-chr10-41883125-4	13.2725468454626	0	1.35796669156562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97309514-5	23.3072768403298	-1.4200504125635	0.587131853964577	-2.41862267048652	0.01557939155592	0.274016030149872	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53041829676374	1.94207584056134
Merged-chr2-122154097-8	26.8910179053764	0.176076757247089	0.333868338068106	0.527383813229906	0.597927081866566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15424269217091	5.32747974406455
Merged-chr9-37236079-7	33.6907101870595	-1.52500980616702	0.4560482632198	-3.34396582370497	0.000825899110744814	0.0309407648249327	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75616994622181	3.27657180668863
Merged-chr14-51941351-7	25.2468522291721	-1.25998450472506	0.384974608517131	-3.27290287943496	0.00106449047507103	0.0377460128730503	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86467714299857	3.63805413719845
Merged-chr13-46134805-3	8.07807635401272	-2.18673404446151	0.842204736493902	-2.59643997439967	0.00941953624603476	0.192857465460717	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09247499969	1.02186287315087
Merged-chr16-49888364-4	19.6503113036179	0	1.3658229358517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37541842-8	35.262245979783	0.275133137016659	0.418922901463756	0.656763180182602	0.511333202644039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47782540906367	4.71263365724216
Merged-chr1-89581281-5	15.3687851440548	0	1.34214574693326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28866367-4	14.6858840684544	0	1.36937519439439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68446075-3	6.00506744416026	0	1.35868057000212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108015293-6	24.2893076067035	0.729971174041022	0.527061576560715	1.38498271644913	0.16605775231593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5387114926347	3.78077038705866
Merged-chr10-121374827-5	53.5825328705324	-0.881248552484917	0.480276072588402	-1.83487915135041	0.0665235974285206	0.710164224787303	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7263309320867	2.89633485955004
Merged-chr15-64003357-4	9.09301252856343	0	1.35897214124137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27702414-4	9.69102612665018	0	1.35791962228513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87653614-4	9.63964820758654	0	1.35791191859719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-36962590-4	13.3781940493291	0	1.36259345208313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146221579-2	3.94418320164654	0	1.38570514656591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80060523-1	2.63565528563101	0	1.4479733322621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9790996-3	6.41231368953359	-1.65196158570985	0.95213373880406	-1.7350100289323	0.0827390288587006	0.810488592934498	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46523444336907	1.28022059301586
Merged-chr1-60941439-3	10.031801268937	0	1.35122026276847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21375391-4	8.83753300686581	0	1.35167891804673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73064192-4	17.0291336673803	0	1.34061276370353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22861407-2	5.93341512169838	0	1.37901655264591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21948158-5	43.7303964101124	1.94334938030412	0.422335936067814	4.6014303172915	4.19599536644e-06	0.00043528647351968	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08317361521858	5.95796083288154
Merged-chr6-146685991-11	133.019939045506	-0.886948040510958	0.292392905127977	-3.03341163535672	0.00241805515840876	0.0720235947155846	C57BL6J_F1_Control-BALBCJ_F1_Control	6.95927496785693	6.08992216043235
Merged-chr13-51741020-4	8.63469966336266	0	1.36885826666227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54564177-10	59.919811182124	-0.401474967274914	0.249777371463764	-1.60733122028693	0.10798172912874	0.956145758871017	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90965219472853	5.5343498753409
Merged-chr6-114838104-3	6.0130617824124	0	1.36113515340888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40598618-9	66.5513525905029	0.393048952204859	0.30681090596231	1.28107881619157	0.200165983715338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27146549147635	5.71977502853497
Merged-chr11-59392520-4	11.7590621464184	0	1.36454206383611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60891416-4	10.6129590041518	0	1.34816900771695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9473942-3	5.518432238618	0	1.38578277568676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75053187-4	12.9964656546725	0	1.35516492488616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105317020-3	5.52466930812919	0	1.35878219272608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-98873666-2	5.56972964604842	0	1.3688503900262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65070723-5	12.8234248507583	-0.0124977947174284	0.688869504199194	-0.018142470585858	0.985525196890817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07669635013709	1.63227011204743
Merged-chr17-43038880-8	38.2071118366344	0.306926256646415	0.279318723306626	1.09883882116088	0.271838375704425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06773921195742	5.56522215265302
Merged-chr4-150459808-4	10.2134264522997	2.72613388669935	1.25087656148307	2.17937882173376	0.029303538088334	0.417320153770958	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.26490736194627
Merged-chr19-41320973-3	19.123494885218	0.60473610923432	0.802713327804839	0.753364978862475	0.451230621586379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.51436894928421
Merged-chr12-3913022-4	13.4123451255529	0	1.34892345667454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23706122-6	23.7708289033194	-0.469346446956283	0.538643673767915	-0.871348666685557	0.383563805333871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32661066584029	2.56034696427319
Merged-chr13-110563077-4	9.85215053808022	0	1.39700540048281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118602089-7	26.6893587606172	0.192724169838292	0.49657155817889	0.388109561782158	0.697934956223636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44714453586166	3.88505814699554
Merged-chrX-121429254-4	14.6442221317267	-6.06189856005224	1.00613733392897	-6.02492160427096	1.69191612641219e-09	4.62165169425326e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84305670056461	0
Merged-chr16-91761963-4	11.9488662091607	0	1.35090989547476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62821761-4	10.6708393156758	-0.400879872756635	1.05179844347082	-0.381137541365602	0.703101192029718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.724326877898254
Merged-chr12-8942213-4	6.16273111737643	0	1.3750216531892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35738069-6	16.2646910391036	0.647927342979436	0.590110160326914	1.09797693132498	0.272214562638287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26276386882201	2.9536658465993
Merged-chr10-75513384-4	18.1192803817854	0	1.39540089380721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109019736-4	8.7076719065479	0	1.34959471728077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8763528-4	9.12188885007449	0	1.35318554009833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97576859-4	14.7924880263902	0	1.33797097585119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13495796-5	18.5081955862716	0.890440220112314	0.758125819127103	1.17452828758366	0.240183488332055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69181239031707	2.22082744010265
Merged-chr12-102414736-4	20.3983433290612	-0.666634850881578	0.485683897896653	-1.37256938879087	0.169886253677368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23946002974044	3.60231181595589
Merged-chr10-17201319-7	34.8176150816919	-0.124809922946846	0.39584317064076	-0.315301443106405	0.75253278940481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8983316778012	3.74241600886602
Merged-chr15-97415694-3	10.8640788043426	0	1.3683272014514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58923306-3	9.05647464702861	0	1.36187285344123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107747516-3	6.27033480271978	0	1.37051786117804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45949247-10	74.8798157531524	-0.238280501666142	0.176206789325616	-1.35227764252499	0.176286513799524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.8718485280135	6.62855309257487
Merged-chr3-65941239-4	10.246004983304	0	1.35763207844886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74710992-7	32.9794360449438	1.32545474364271	0.370146861300843	3.58088878285915	0.000342427400479299	0.0162001836924754	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85937843453442	5.10507641774737
Merged-chr16-35803920-1	2.31393099978607	0	1.44172255115087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31114403-2	5.31839940179603	0	1.37045682917412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-98141-1	2.23023636186519	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11442082-1	2.0380644603581	0	1.41808589351783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58239297-1	1.91020428815561	0	1.46479814973025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54534051-4	8.87890759059999	0	1.34489462011169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33878779-1	4.36306059476958	0.464984267304287	1.07368381770256	0.433073740739847	0.66496119905421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36809407398891	3.19827110988615
Merged-chr3-135470162-1	2.82621773675179	0	1.41169125331782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123465855-1	1.93160669983118	0	1.60073081893259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35827118-7	66.0678344855368	1.04327927828573	0.34621342701316	3.01339924128959	0.00258338811075849	0.0755814824072771	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45783237879169	5.50830580112796
Merged-chr17-63896039-4	7.69226037588013	0	1.3601515568295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137103134-3	5.28341117678373	0	1.40781156734258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68756965-4	12.3297903947881	0	1.35290948909742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144299716-2	4.31145528066241	0	1.40246331546866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57343177-2	3.34101149058885	0	1.38851837633654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105170301-4	20.422317376275	0	1.35090366671079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56792563-3	4.54931862514498	0	1.39405651876415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16127329-2	4.05097809594364	0	1.43460269038913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143634845-1	2.60925540201661	0	1.465863159888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46476236-2	4.05715290622808	0	1.4158058493137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-63888676-1	2.02263769106463	0	1.54449118313665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16182671-1	1.96624586659299	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3728470-2	2.8602037639821	0	1.49856470475714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120096397-3	4.86827955316693	0	1.44739016198025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86745745-4	11.1459896539848	0	1.34934632477456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153090671-17	113.566096510178	0.161173684349279	0.170539498856533	0.945081259356035	0.344617392195558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.91874984282863	7.06136372277389
Merged-chr11-79202685-6	24.873270881768	-0.773040078995831	0.646694534183196	-1.19537128912372	0.231941997978527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20191471427944	1.01784625364355
Merged-chr10-82923705-7	35.7426001031169	-0.966477250323555	0.516014774720291	-1.87296429806189	0.0610733152072335	0.674540596121685	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37698473546808	2.26115750236989
Merged-chr10-31600285-3	7.68361143471098	0	1.38641147698182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106564453-4	17.9123888005546	0	1.3526371719614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77343548-2	21.1898128235709	-1.27590060977644	0.439146875609701	-2.9054074630612	0.00366775284655979	0.0987985019752941	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74263252254918	3.57972747257216
Merged-chr9-121314203-8	45.9706649631138	-0.773300982448471	0.412215503520767	-1.87596287826062	0.0606603774362884	0.6714391075258	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98448897326113	4.13406248401489
Merged-chr8-71476680-7	18.2737990029372	0	1.33575726794171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57246711-8	30.3268205146772	0.0407172588170297	0.396044719950405	0.102809750429519	0.918113966551539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06955576585722	4.09339852877522
Merged-chr12-76943231-4	6.70455965262074	0	1.35196917627905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72272942-6	24.9523847022627	-0.488938561890436	0.385908003095978	-1.26698217701599	0.205161662852925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96405157217041	4.32969765997436
Merged-chr1-7397920-9	148.556513037557	-0.205732004716624	0.346104242574375	-0.594422082741195	0.552229842250006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78468179264966	4.50709588846265
Merged-chr16-87594261-2	5.96764442295382	0.270869969313224	1.01910813528095	0.265791195198877	0.79040002460557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.18909650862134
Merged-chr3-65533202-4	8.79164069832216	0.25003472240928	0.97815406297673	0.255618958069213	0.798245078215154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	1.11893902259477
Merged-chr16-90323120-4	7.37534783933527	0	1.36232780041671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-8136084-2	4.0496469996119	0	1.44820324344634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114571337-2	4.12802107313273	0	1.37942419690759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72263846-4	10.0182690942926	0	1.35284231351812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119464540-2	6.13817387543689	-0.575238663535174	0.936605520431589	-0.614173898174445	0.539100419736974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16523349939429	0.956353103033036
Merged-chr14-66257756-6	37.9835704468272	-0.117622536280266	0.426993376629498	-0.275466887118315	0.78295756232425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76706983954241	3.40141364169327
Merged-chr10-41523437-4	12.8188256114402	0	1.36094104083392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92370553-4	10.0894210048536	-0.0391044001025011	1.2119297975302	-0.0322662254713038	0.974259743342	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr1-138923085-4	10.4406551569745	0	1.35365104285745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170582559-4	8.81650777730767	0	1.35017192177184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75825163-5	21.2756970824374	-0.8800824855035	0.975343910433609	-0.902330425287878	0.366881367885164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	0.724326877898254
Merged-chr1-157101297-8	34.297734617501	1.1690060873789	0.340762017610324	3.43056452000382	0.000602326712420783	0.0246550284340974	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40823253479074	5.59489105539201
Merged-chr5-112240933-4	9.94692403925899	0	1.3429599266971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152612911-4	11.6968739590916	0	1.35657237156531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11676172-4	14.2652142412443	0	1.34761012629263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154175548-4	9.52619470382905	0	1.37310456665024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63153887-3	6.79176798342319	0	1.37882651628005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86819418-4	9.85308279496703	0	1.35104389978061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85985934-4	10.2161429093264	0	1.35772441710485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96875910-4	8.99960823938627	0	1.35715370696665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138244654-3	7.35743671392897	0	1.36246328747538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95674317-6	38.4316577359646	-0.0774591499603067	0.516444771398794	-0.149985350322181	0.880776173262422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44249677793252	3.38150930917052
Merged-chr7-43667784-3	9.76230331635217	0	1.4357012464319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24087308-3	9.07265217269653	0	1.34954468559695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83634213-4	16.8853407915504	0	1.36571958349491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61896952-3	5.17352632469899	0	1.3881760369008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126819484-3	8.77701333535901	0	1.36283019993634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146759220-6	25.0269288241905	1.40464260906993	0.478062623280703	2.93819792777477	0.00330126190279421	0.0918859681382439	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20986915723297	5.52343230574061
Merged-chr5-136583864-3	5.55948500264582	0	1.40257518514368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153754834-3	6.55250726220895	0	1.39988085056545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43547316-4	9.33220820405702	0	1.34405356550837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19647155-2	5.88663940687981	0	1.40485806842045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84592988-8	23.0833245747339	-0.768134379083027	0.426594296093778	-1.80062036955639	0.0717627363547481	0.743038206763382	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62310737601705	3.17104061883265
Merged-chr10-78160128-4	7.4842315230913	0	1.34832616575448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21169027-4	9.06724673988041	0	1.36049381879345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112530047-10	64.9099109767405	-0.0827346941117877	0.267044090517488	-0.309816607255609	0.756700421828946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54743251828271	5.39250812370243
Merged-chr5-111141634-4	10.451276558184	-0.298144569331415	0.57199723486849	-0.521234284288039	0.602203573662283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22609819380517	2.69771006936856
Merged-chr13-37312760-5	15.1080379288282	-1.37078855198176	0.659421954155922	-2.07877299708107	0.037638219927394	0.488639547851514	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09760506888322	1.31096605903064
Merged-chr5-43915397-4	12.2602643348953	0	1.34776735187828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16878852-6	35.7114842544172	-1.31979038515997	0.470671892135411	-2.80405608920507	0.0050464125304551	0.124013534693946	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89428616053974	4.10420321278332
Merged-chr6-52838872-4	8.14755762824678	0	1.3561778302777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27298453-4	13.301620349198	0	1.34927119689942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37319272-4	11.9028376419446	0	1.36921330824669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139233737-2	17.8457483656079	0.177956669658406	0.572111446286957	0.31105245457569	0.755760745115914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00150490545887	3.9446093430228
Merged-chr1-86441592-3	13.5600584042451	0	1.3531570154588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30155214-3	10.2995814193675	5.42968118739048	1.10166013128132	4.92863545953626	8.28059132621458e-07	0.000108732755763873	C57BL6J_F1_Control-BALBCJ_F1_Control	0	4.1249883716857
Merged-chr4-9675458-4	11.0651329139074	0.0150464108049235	0.719980291751445	0.0208983648265166	0.983326731019571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	1.92460482503279
Merged-chr5-8312526-3	5.57847200197127	0	1.39551216755617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10764516-4	11.6622066873165	0	1.35192039995354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83221927-3	4.56010919032488	0	1.39132409186644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103698151-2	2.61691121096662	0	1.51866588690325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61512263-3	6.00260973953652	0	1.36790452151724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31428406-4	14.0738997646431	0	1.34363594968168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115163134-2	7.76196964131883	0	1.37516407217184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28383968-2	5.00077891618179	0	1.41817247489232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55297804-2	2.88880629342281	0	1.45816961796623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110538365-7	31.410000468189	1.33448529277804	0.438221560339322	3.04522965904445	0.00232502695945651	0.0698651965113855	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15611580154736	4.41718663146768
Merged-chr14-93654054-1	5.69059942714864	0.308445464944421	0.896971077709932	0.343874482254119	0.730940683100328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	1.65307960418419
Merged-chr2-70986977-3	8.20080872266849	0	1.34666827540047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21827110-4	10.5564892940419	0	1.34769770007514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70823292-6	20.8480851779844	-0.888964245896014	0.527015590015166	-1.68678927670893	0.0916438781199517	0.860898447022449	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39013921697486	4.334073176102
Merged-chr17-31291066-4	10.0878415085311	0	1.35428620936536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125416326-6	61.3660220565151	3.03310197890904	0.470297370367729	6.44932795719746	1.12347213417363e-10	3.99155697657153e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46523444336907	5.60747123923791
Merged-chr8-125600159-10	80.8942646403249	0.501344407400836	0.197234383990595	2.54187123592376	0.0110260785255805	0.214672851924079	C57BL6J_F1_Control-BALBCJ_F1_Control	6.07943358186039	6.58968402422726
Merged-chr19-21442058-3	13.4700006558228	1.08055734403169	0.971410540578424	1.1123590890709	0.265983787265645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.51226750748471
Merged-chr11-113334653-4	18.2835807033705	0	1.34292616348514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84351469-2	5.38390022581646	0	1.37980206255911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132064152-4	13.9568184236649	-1.21333304661942	0.815717265208536	-1.48744313547076	0.136897811385326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22017310661124	1.27743081564928
Merged-chr11-117993675-4	13.0572877440433	0	1.34905002192473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80556004-4	8.6531084749556	0	1.348080176592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78765228-5	29.958574947333	-0.043405100189333	0.646968424979166	-0.0670899823136357	0.946510068883378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37496550679752	2.11342857931014
Merged-chr15-38710939-4	11.193661142848	0	1.3792809850407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47658981-1	2.78518759534463	0	1.52042833220231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67295720-1	6.55043861344158	-1.19291745088334	1.16511886510085	-1.02385901268544	0.305901872122574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	0.600815099743027
Merged-chr19-42157973-3	6.74814280766959	0	1.39741828883676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84222674-7	34.272959771687	-0.965288183586388	0.352814481353078	-2.73596531492815	0.00621975814972633	0.143323371454419	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51497634129768	4.52349414848616
Merged-chr7-75655847-7	21.3587017215891	-1.65277493116229	0.450552797111822	-3.66832686814303	0.000244142932504433	0.0122542619279856	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05771277192823	3.50175778596789
Merged-chr2-38536062-4	8.02855303445668	0	1.35349786476484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59551226-4	7.68024352409505	0	1.37542970349454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27677751-4	10.2292232816284	0	1.37573684391194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50407004-8	32.2461814277564	-0.183950434787039	0.412393205250239	-0.446055930226636	0.655556845386866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53975170086962	4.63037036305755
Merged-chr7-113180450-3	8.62717112279089	1.81323557100682	0.864545700724455	2.09732761320471	0.0359645840851127	0.475343066241845	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	3.00492333909925
Merged-chr9-100456475-8	34.9328847559265	-0.995074320478081	0.353970052815964	-2.81118222449016	0.00493598219472703	0.122016851352054	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3971420543971	4.43589023071746
Merged-chr10-5208501-3	7.94495887964009	0	1.38126049515867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19601760-4	13.4005082160831	0	1.35464849210005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106634978-4	13.6608292763528	0	1.34350335232804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79180960-4	12.4142204552917	0	1.3475369143759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193002512-4	27.8133111783584	4.38507779470041	0.832751856252575	5.2657676614898	1.39604753131538e-07	2.2996287198416e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	4.87787005432098
Merged-chr6-97867385-4	12.2082923149751	0	1.37485259871812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69223397-4	6.19480834985947	0	1.39475471620399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89253608-7	26.9340645401295	0.31724367189147	0.400369806465718	0.792376614740138	0.42814111080992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25014710768332	4.25450030558665
Merged-chr16-45757646-9	38.74941367766	-0.00941031486122007	0.358405081986924	-0.0262560865740274	0.979053080661606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0844782019425	5.01015263814443
Merged-chr5-64269790-6	19.6201189489215	-0.811827919769309	0.732202052221366	-1.10874848999176	0.26753869719833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	1.34263109599227
Merged-chr18-4325797-4	6.99159488001918	0	1.39740001495656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57483072-4	10.5000806352981	0	1.35003324830144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80835478-6	33.5790721103492	1.3539045405972	0.425771286324094	3.17988691131843	0.00147332537707833	0.0486860146945902	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14769774140463	4.63717010039879
Merged-chr7-100950732-5	56.0115248866109	0.531453044287033	0.436275608354856	1.21815896673912	0.223163569379373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61309561208084	4.13233033798123
Merged-chr18-80738377-7	32.5688389209651	0.170658818622995	0.419979755709246	0.406350106887397	0.684485373646743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46092756770582	3.72357677268461
Merged-chr10-91270594-4	15.8744714486367	0	1.34031508599838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156524251-4	7.73800208504715	-0.553224288560043	1.22104604632183	-0.453074059104099	0.650495414088945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.601513806634888
Merged-chr7-123330720-4	14.4512918522088	0	1.34041728655731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48429723-4	11.4670288171513	0	1.3464521539125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39196753-3	15.7117343555861	0	1.35590264035122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96723885-4	7.46188049247547	0	1.34783144001669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85400636-8	31.4964635003587	-0.189977258788708	0.343945082497929	-0.552347652157091	0.58071018841384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95194580791786	4.66557450088657
Merged-chr2-129602048-8	30.611678779829	-0.313642797412212	0.39260447429029	-0.798877287323796	0.424361569995671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94370883467678	3.758160891868
Merged-chr3-32297435-4	10.265735748655	0	1.35638789446717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5360060-10	69.2989799102005	-0.736898877006475	0.216058004693266	-3.41065297743835	0.000648075174305651	0.0260760313842197	C57BL6J_F1_Control-BALBCJ_F1_Control	6.45381765899283	5.80189645749601
Merged-chr13-23521952-3	4.49632682387888	0	1.37613666976419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74379142-3	7.84456318251621	0	1.36384708438422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155122772-2	3.7178242988201	0	1.47059438838697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155224384-4	8.56356742857613	0	1.35540759393012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9373342-3	8.68695460406117	3.09157189543996	1.12884734544903	2.73869793635401	0.00616830173620748	0.143047232968644	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.46573328458049
Merged-chr5-29947294-7	25.3412044415774	0	1.34265020628936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110560746-8	43.1947391226627	0.212077389867104	0.306905381290922	0.691018805128319	0.489553723431672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73229469216478	4.95024583747279
Merged-chr17-65608972-4	7.34176581125445	0	1.36367641572134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50827541-8	29.5522276190093	-0.291010221885638	0.441809314951652	-0.658678330305198	0.510102351056688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33150512645549	4.11644095580187
Merged-chr16-55809483-1	4.02942936932448	0	1.58890202044703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52307223-7	69.4953526848677	-1.88393719856577	0.244552962408036	-7.70359590010782	1.32289741665508e-14	1.28413179771345e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	7.51801210735077	5.64108660077982
Merged-chr4-74271407-4	9.64631353292217	0	1.36428181062786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91855925-4	8.89872546327239	0	1.34664125286549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79859111-3	4.7940304048384	0	1.43646457113719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12698082-2	4.2145779216861	0	1.42958436181335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75283067-1	4.3760501795066	-1.57911341573561	0.82935163184279	-1.90403365123533	0.0569058016869218	0.644446348729038	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2180769473006	1.39949824061849
Merged-chr4-109105404-2	3.33438897492015	0	1.49131315580863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143086627-1	2.23948288965786	0	1.45605754535308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92988422-5	32.6217369449214	-1.62290396584253	0.338623591526954	-4.79264884801551	1.64593570011983e-06	0.000192411653167342	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52706456842792	3.9430725603336
Merged-chrX-50983757-2	2.39607440497442	0	1.58500388752892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82139590-3	4.36895184454668	0	1.47672235155269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55817250-2	5.64945571506535	0	1.3936533332784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133628725-1	1.35143913176855	-0.0317056604870693	1.57078977708777	-0.0201845345249518	0.983896165034791	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr6-83018662-1	2.69871203757637	0.84266547731062	1.25691861289683	0.670421671430677	0.502589023475959	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.788686275880602
Merged-chr9-118802240-1	2.64343096375457	0	1.42133601584188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88552186-5	23.9293877505902	0.640228961101391	0.422773055996332	1.51435611144279	0.129935544246688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41691244236207	4.17596524434411
Merged-chr16-4371227-3	8.7529822269033	0	1.37891213034142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126466791-1	4.13850055170749	0	1.41768099242586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64715468-4	13.9808388558042	0	1.38205140704847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47406721-6	22.9194119565884	-0.16046894713189	0.521160385315648	-0.307907031411644	0.758153075271338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01013455499922	2.92114649945454
Merged-chr6-116136358-4	8.89648685590273	0	1.35631510702275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84982256-8	37.8293565479057	-0.319438748269231	0.3042965646433	-1.04976127037018	0.293827885865072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8991791569088	4.59438342932994
Merged-chr9-41071011-10	37.2866749888804	0.281412297361939	0.325871520530981	0.863568245863892	0.387825114219687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97117855489057	5.2192036344429
Merged-chr4-138426870-7	22.8896341140013	0.0474796958979742	0.383096364260575	0.123936691463037	0.901365401310171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6362070320978	4.9525711125965
Merged-chr6-140751246-4	8.27813207225703	0	1.36211546831848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76950471-4	11.1503900768792	0	1.36319235617539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86631326-4	8.26778508799631	0	1.36174538077344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117314017-4	7.60037982283921	0	1.37807963897492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19873818-3	10.4416880310278	0	1.38528121359637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62185184-3	7.46324969440052	0	1.35242742752037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130853529-3	8.20125290574678	0	1.3510600875023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83660575-5	20.5673839854227	-0.908190396148904	0.553263647629435	-1.64151467395377	0.100690623576833	0.914832292664728	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36992210489143	3.46765726516051
Merged-chr10-60391156-4	14.6629515795515	0	1.39268821301441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37905037-4	14.2118650411676	0	1.34135148682656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115530024-6	26.1019742990439	0	1.33714441195518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120697851-4	9.99863117229083	0	1.34979941953343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92903838-4	9.34209348729391	0	1.35232584672938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99432517-3	4.8227930394563	0	1.36014924964543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43853417-5	20.5607613166086	-2.73032654327884	1.07322547230059	-2.54403814831756	0.010957911632581	0.213805139424074	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0509200531463	0.303163067301871
Merged-chr2-153276314-3	5.00080708670011	0	1.37040141418261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112631640-4	10.3599370262494	0	1.34421709947892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69077442-4	13.8210413839358	0	1.35848219920437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184562955-7	40.2980445940829	-1.00894249644882	0.397027411521375	-2.54124140341504	0.0110459623866156	0.214816268269657	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44262725643674	3.33464771619589
Merged-chr17-34637929-9	41.3281404291744	0.117148441230744	0.332221292431303	0.352621712995618	0.724372057346322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00120859866829	5.11490469441732
Merged-chr5-146757480-4	7.1391645218159	0	1.37021028956248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29885373-4	9.34216037079352	-0.842008728099417	0.731304974942125	-1.15137836737136	0.249576609495702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46859289591319	1.51301315377886
Merged-chr10-7142499-4	11.4974696193063	2.08748139328199	1.18081426286544	1.76783212985282	0.0770889718181737	0.776446066159738	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.990919527803163
Merged-chr9-45238266-3	8.91407857578423	0	1.39477293891772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166429197-3	8.28235284410026	0	1.36345716958456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70746966-7	30.056136464084	-0.56997452111114	0.408430488388689	-1.39552393201537	0.162857903132076	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79775261470981	4.22107891078215
Merged-chr10-53980106-3	7.19667061195252	0	1.37432608410599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117231444-4	6.92780635373432	0	1.35498815257839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115063101-3	13.3413594365806	-0.553194346495896	0.435149687379204	-1.2712736847581	0.203631300728955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03415254056693	3.72257638941285
Merged-chr11-90224298-3	4.87397879586825	0	1.40603584066461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13407472-3	7.15724985731442	0	1.38400922433628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142021871-3	8.25923690477504	0	1.36690406228184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32395874-2	3.7894553734187	0	1.41919057908342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67733207-6	29.5408690913941	1.74288708167251	0.351366470423622	4.96031132273723	7.03802920808795e-07	9.59703527248131e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90226045886172	5.57169323290386
Merged-chr7-128633368-2	5.57886827819752	0	1.39252539147197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34391028-4	8.68313426251117	0	1.36462454726533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122376470-7	32.2846105022418	0.333091429129254	0.279465028108757	1.19188948750907	0.233304580722365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57416472087088	5.91401073834545
Merged-chr3-60627778-3	10.0398577701493	0.0217109154565421	0.513669383175155	0.0422663218164571	0.966286392579938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34005910040985	3.3371780932299
Merged-chr3-103587883-4	6.93523756905455	0	1.35408788507098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75492109-4	9.33123027273691	0	1.37497506794935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98217119-2	4.41601998380081	0	1.43636842104694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103656166-4	8.83227003740121	0.621638909070971	1.39606849422381	0.445278230719325	0.656118697834109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr7-99781562-4	7.34294678099036	0	1.36448782196137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106496147-4	13.151493526505	0	1.34738967964587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171735090-7	29.1771520099421	0.782140051925499	0.518432230442774	1.50866401816396	0.131384665168035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51597107990649	3.61146172496034
Merged-chr3-146118211-9	31.8314685250352	-0.238622596192771	0.324823738246218	-0.734621790516721	0.462569863346687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65069635630788	5.35830395561571
Merged-chr7-28726769-8	27.9361168977599	-0.672574074857236	0.368978678467329	-1.82279929466653	0.0683337946105234	0.722254859271523	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02433295402735	4.35696831580451
Merged-chr9-62972506-4	9.35849919741164	0	1.36915687909724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90682065-4	10.6386067198179	0	1.38263814190596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171366111-5	53.8324780986448	3.44126116387468	0.403066423260367	8.53770238671492	1.36917021258339e-17	2.4008620511555e-14	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11039133983348	6.35006809485121
Merged-chr4-139252129-8	30.028619132856	0.842073978672535	0.390106053154008	2.15857706350457	0.0308829937833721	0.43078487530673	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92907347777492	5.09937620784062
Merged-chr3-89847835-4	14.2777416762469	0	1.35471487183803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177982750-2	5.99148876939217	0	1.36306921662179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36426319-2	2.53844977774312	0	1.45309227314441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62729966-2	3.18485280416193	0	1.39853436270932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133623453-8	20.8088410502451	0	1.34520429906868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114748137-6	21.7543522806985	0.502324048836635	0.564964686702709	0.889124684532652	0.373936073980812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95117408380301	2.86801679306185
Merged-chr10-8890660-4	15.302456915279	-1.90471656301314	0.564846354649473	-3.37209676106549	0.000745982350561461	0.0286676522771802	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21069731060171	2.086211388454
Merged-chr4-59362745-8	25.2008198687188	-0.0315277211372482	0.310305303076332	-0.101602263398936	0.919072382816399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87637186555259	4.9314551598302
Merged-chr8-36122822-15	178.077360549959	0.105703090573655	0.160686304941841	0.65782264774782	0.510652099743148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.32686790144763	7.43789342878453
Merged-chr2-102917706-8	24.5064685389424	-0.503427551503185	0.382775680350966	-1.31520255163963	0.188441837836973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51929038775556	3.9484674168749
Merged-chr5-105654742-10	55.4187551422352	-0.171596030830575	0.281481007241732	-0.609618505035443	0.542114550432241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.50836900267083	6.25599678149863
Merged-chr13-58999806-8	52.2713832211857	0.0306687652096322	0.293955667166447	0.104331260238186	0.916906471191176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90959652475478	4.92672324251989
Merged-chr3-88664284-4	15.5571598763739	0	1.36356180748875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31284632-4	10.759532178898	0	1.35769007930379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79455001-4	7.69180128445259	0	1.35248785125587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83830735-4	9.07853184137044	0	1.37008627060178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-48459021-10	65.375086294453	0.0438768418554041	0.253186969989279	0.173298182988098	0.862417051850277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10577000520321	6.10562327764697
Merged-chr16-50225138-4	10.595393178502	0	1.34947267774457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148489113-4	7.50322801185525	0	1.35068176157289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79307185-4	8.41065589938418	0	1.36800846930059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33180113-2	6.9366111557888	0	1.38315036642595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-61994456-2	6.93192524571604	0	1.36707996427837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113447509-1	4.76756455818691	-0.0404962480676855	1.31152786120458	-0.0308771542455007	0.975367509505381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr13-58066995-1	4.19069608977895	0	1.39073464295554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81084019-6	40.5008402699572	-0.543232456839681	0.351523276721083	-1.54536695807689	0.122257527845939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90878065898601	4.50302406498207
Merged-chr10-33986990-4	6.25267577208298	0	1.3545055799095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26896076-1	3.70373321055928	0	1.37695476802464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102895284-9	32.7607372193433	-1.17413433695416	0.479048279276841	-2.45097287214267	0.0142470690215256	0.257808397117547	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06495676151878	2.63427303150766
Merged-chr7-80583139-8	53.5354595635619	-0.0635746757184408	0.259634307107919	-0.244862385200949	0.806562987444672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56550762793331	6.4368752679665
Merged-chr17-88517783-4	8.41091130480141	0	1.36182453382302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80420863-4	7.47709602967481	0	1.38676220121938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116436336-4	10.0424152642525	0	1.35026484299232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25993531-4	7.27797373366206	0	1.35903922672123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23993689-7	31.492079793333	0.419117699943855	0.310207655731356	1.35108754474718	0.17666739081468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07664176041873	5.48344780495435
Merged-chr3-88396024-3	7.05695178190246	0	1.35245422593261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88420852-3	7.78089196072919	0	1.36019659920298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96568520-2	6.40617616939047	0	1.36572545165809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101981503-4	9.73089359596125	0	1.35568533503028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117988314-2	6.78552952335558	-0.569646501479755	1.27073182649251	-0.448282233594558	0.653949521015061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.71701424649985
Merged-chr5-130283167-4	10.7544105701507	0	1.35785156277846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-194985993-4	8.1369277597725	0	1.34998729552234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43042937-3	9.32285552587288	0	1.36745937266345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117119039-2	8.54747351449362	0	1.34983474363236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86679959-4	11.8044267654413	-0.388893383898991	1.06789853032681	-0.364166981089464	0.71573332185409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0.903978167044898
Merged-chr1-171845650-7	28.7059491865122	-1.70724938783395	0.452445648498669	-3.77338005901713	0.000161050662174852	0.00868428992030414	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52395165763937	2.92214750359184
Merged-chr4-99368259-4	11.135679282138	0	1.36921091988829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106959778-4	9.64514299067368	0	1.3606929333863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125729932-2	6.96012734135998	0	1.38780838826539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97546087-2	5.46374129743239	0	1.37119162897981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67869358-8	44.8744919770888	-0.374100694331357	0.322664557374928	-1.1594105574374	0.246288875435114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70773866556716	4.36076163130332
Merged-chr19-16085279-3	6.63616354299705	0	1.37006365640425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37842974-4	7.17160527106297	0	1.36650268137943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3350570-2	5.15169894081176	0	1.36881874521559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117087590-3	7.01604487541993	0	1.36137816287315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69679547-8	28.9112187169581	-0.0848197520825641	0.380920152892027	-0.222670686858111	0.823791817091716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0816102654889	4.13482322897417
Merged-chr16-38131888-8	42.4412690620002	-1.35390743233626	0.360166798541027	-3.75911227192709	0.000170517311372674	0.00911369917430071	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37369483942467	4.01839757331749
Merged-chr2-116890496-4	9.69483355956407	0	1.36891764583659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4873265-4	8.87646391646919	0	1.36655637136961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58657544-4	7.03263055725625	0	1.38534245793323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47004288-4	9.49659496113969	0	1.34823424154969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9678189-4	10.1180851923643	2.45169127337463	1.16007274616967	2.11339442415973	0.0345670228115361	0.464722585588789	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.27992882773773
Merged-chr18-63881609-4	15.1326032934377	-0.898354919850063	0.908746089797321	-0.988565375891107	0.32287583355668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09227966392264	0.788686275880602
Merged-chr15-62450348-3	5.05521681513996	0	1.39317029509119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131353784-6	24.7013706201512	0.331232291894399	0.386399444972792	0.857227659624933	0.391319078975643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41924566150178	4.69100843099617
Merged-chr4-7457647-2	6.31341786034505	0	1.39787181393101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78160737-4	11.660706483271	0	1.36211681106977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50449274-4	7.54058327383384	0	1.34806284959493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10849713-6	21.693274280731	0	1.3451459533479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141658925-9	49.2980569237194	0.528398914744484	0.32858321234577	1.60811293727461	0.107810446273679	0.955154565313394	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78208992747843	5.33561744471342
Merged-chr16-93918545-7	24.5838696048598	1.20022097103092	0.411794453431522	2.91461179486358	0.00356131230973116	0.096794687922338	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44742352238	4.73830501442263
Merged-chr12-25142447-8	34.7321377924828	-0.857142650009546	0.340171997809717	-2.5197331218574	0.0117443841943493	0.224556095821538	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01768233856571	4.43107324943581
Merged-chr1-155471574-1	1.6178756209568	0	1.56140181114233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191270297-4	11.5732817295639	0	1.35558196142719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8653632-1	2.55351170380907	0	1.41750071955839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103816838-4	10.4348247811271	0	1.35274669056347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35983671-4	13.8337609686701	-2.1989800339417	1.18516726007437	-1.85541746555141	0.0635366351947936	0.690757590510758	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	0
Merged-chr13-28481155-2	5.66480225758549	0	1.39138834811371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31168599-2	4.89484471058346	0	1.38558942970356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184626629-1	3.31394002289559	0	1.4105693953984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-117301167-2	3.59201082645546	1.28527755152754	1.50130188173421	0.856108666195014	0.3919376755359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr10-94472028-1	11.9911333532495	0	1.3660233006341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81622695-1	1.34924000737979	0	1.53831216707948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26913700-1	1.84463060475446	0	1.49636439998345	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39244214-3	5.38710412765008	0	1.40263669346969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85369239-1	1.92173619283885	0	1.53719996164079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23718053-2	7.3909882038135	-0.471786038613823	0.790092681531286	-0.597127463197673	0.550422283437902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73240758328545	2.35031680267015
Merged-chr14-122296631-1	1.63847952323444	0	1.53833691618688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34592802-1	3.3393956634401	-0.0471922011131236	1.18739547536334	-0.0397442992602636	0.968296983856598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42436654726916	0.788686275880602
Merged-chr8-122932589-3	16.943123533075	0	1.35309050169745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-93184290-1	1.30625969406035	0	1.60932743121911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26115818-1	6.40270368620828	-0.299907291137413	0.880513164632222	-0.340605118905497	0.733400875319947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96334085054552	1.51226750748471
Merged-chr6-33982889-4	7.9899726173326	0	1.34968585617993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48998292-6	18.0566285647232	0	1.34339866434665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23591834-5	25.5834953260722	0	1.33832488266314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170153817-9	37.2313010157384	0.213567588965258	0.395431098402413	0.540087994667327	0.589136349582573	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88457774098333	4.10711735333384
Merged-chr14-77240205-3	7.94577855697213	0	1.40959663705113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64304218-4	7.57700904944698	0	1.3514596120439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165445148-5	22.1449932432319	1.00471069077296	0.508891371548211	1.97431268625425	0.0483461992659323	0.576706395851835	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97864699050518	3.99460250858396
Merged-chr13-100681831-3	10.1751714776396	0	1.3479612387712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-59216384-3	7.06269681726108	0	1.3862608490148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96580102-10	41.8507753438817	0.551901257101224	0.351989022692474	1.5679501959452	0.116892755885446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48651283247	4.89466507114331
Merged-chr10-117856386-4	10.7090011657332	0	1.35490605557077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106261269-6	37.1846750820756	0.254573108073054	0.47073905824583	0.540794530672045	0.588649213060619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58943000452715	3.87494476460435
Merged-chr18-38631764-8	33.8233160669771	-0.183834331015141	0.330425865029774	-0.556355753199213	0.577967680353721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77890874217056	4.58989916903738
Merged-chr11-107675900-3	7.6467222402594	0	1.36768220850996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11637278-4	8.56327306340667	0	1.35720340607423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41073990-6	26.3479294733039	0.554990111458171	0.333412183489731	1.66457657800398	0.0959972614353783	0.887222859817906	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81813313105997	5.38758743601883
Merged-chr5-62677576-4	12.3381429544491	0	1.35220901279383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16042840-1	4.37862133440878	0	1.38730749204993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47688679-3	16.925257640432	0	1.34173983596917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-138095325-3	8.85491963470541	0	1.40071440800224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5607688-4	16.5504125958424	0	1.34588638843684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-14739170-4	9.73269344769995	0	1.36321231162267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120873117-1	4.37077115079365	0	1.38742713623087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9107579-4	7.03906263958121	0	1.39579885228493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89354095-4	11.59264442465	-1.03180832723034	0.63632644748138	-1.62150784603454	0.104908768661644	0.939649984458446	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3730050033201	2.65187883000891
Merged-chr7-132714352-1	3.21227532777507	0	1.45206338847695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36107690-4	9.78771100154399	0	1.35612853530851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95511989-4	12.1820515393622	0	1.3508160494202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-27384075-2	10.9452915908405	-1.52976730283789	0.621715974478646	-2.46055653326379	0.0138721714961085	0.253216041086959	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38464233674334	2.64485078894682
Merged-chr6-26304380-4	9.67405211668961	0	1.36898136969424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58758420-4	9.56947900986845	0	1.35583639987933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33912772-4	8.43539603006463	0	1.35118420585254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-54467728-4	11.8495119922134	0	1.34545932092049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20392126-4	13.0369168423223	0	1.3475584257265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120498723-3	5.22173021610433	0	1.42870640842627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121848075-4	8.42302586608558	0	1.35152589176544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149827173-3	9.27699634375944	0	1.36095094698582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135707634-1	8.00349386412821	0	1.36056067623532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102432951-2	6.46965958199589	0	1.38306441576002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127282583-9	61.7280317632094	-1.48078674261363	0.273006880639975	-5.42399055709662	5.82829621716082e-08	1.07762025193417e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.6459399151622	5.04639851080477
Merged-chr2-93217239-4	13.2474147235552	0	1.35785921077294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136071533-4	10.3280190327456	3.276239845159	1.08629743618133	3.01596941688089	0.00256159095327561	0.0751336879132284	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.62518823153097
Merged-chr7-84611776-4	10.7137722217684	0.132846289580729	0.834488323707596	0.159194905197113	0.873515317739676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.38572824442771
Merged-chr6-8686895-4	7.4615741738555	0	1.36033514811927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71301516-4	9.34328590031686	2.02032865423678	1.14188954044055	1.76928554180233	0.0768462350016928	0.775430987827206	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.30139522650344
Merged-chr6-148989696-4	9.15342256174676	0	1.35721116506694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8124327-2	4.09080709932396	0	1.40697170211214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80042343-8	26.9028854072192	-0.364712020772585	0.333106877099322	-1.09487988944713	0.273569260598057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87660788956829	4.56773406294249
Merged-chr4-140952425-3	7.10184043568011	0	1.34503824769327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69083169-1	5.88185018255958	2.16071511892187	1.25783605081256	1.71780345898502	0.0858324704042905	0.82697044642092	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr14-20253456-2	4.98144438009079	0	1.44649185221092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32834216-4	11.2404113669458	-3.23010617940075	0.674040308684313	-4.79215580698093	1.64998683281388e-06	0.000192471318122166	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74382564273129	1.25298535761957
Merged-chr14-69853093-4	8.19824096989711	0	1.35268941605002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10480954-3	7.44290131091113	0	1.37149209604711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160214240-3	15.4139521307674	0	1.35790093042584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71747286-6	31.1859222320097	1.39178913433243	0.383996247659196	3.62448628812559	0.000289536379973297	0.0142047906849896	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01756995255684	5.60060037781875
Merged-chr19-5648933-5	38.5150132126912	-0.895133666551487	0.452028258148407	-1.98026041605922	0.0476742742413212	0.571450027229102	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28523866924323	3.49856473310681
Merged-chr7-66359205-4	8.06293364599241	1.7602458519479	1.28542226229663	1.36939113595474	0.170877043553648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr5-43185006-4	8.95742383611054	0.871575470495216	0.714394023469544	1.22002066347406	0.222457041754143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86333058947232	2.87452269427101
Merged-chr1-193191942-4	16.2875099559932	2.09637248696601	0.516960770756164	4.05518678699666	5.00942562726929e-05	0.00331274169918165	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7084981770064	4.65847702655723
Merged-chr13-37873687-4	12.0580218921638	0	1.3567921814088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122521502-2	2.36016567801119	0	2.19024284087354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3906650-2	5.08053508658046	0	1.37343098764853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111694507-6	17.0299296834142	0	1.34081161020362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99853387-2	5.66765995319158	0	1.35553711185839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16885364-4	9.72021149245005	0	1.35499603662423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106308613-12	45.5805307170466	0.336022957434104	0.277948324523283	1.20894039570278	0.226685745261938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63537645038424	5.93172651555173
Merged-chr12-25101144-10	65.6509166395902	-0.0940728195640979	0.300523915851636	-0.313029395006752	0.754258329619658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01883221505752	5.87529119456564
Merged-chr1-61042884-3	5.43957010087757	-4.05345932094449	1.12213344310681	-3.61227922208773	0.000303517489412182	0.0147443317309712	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43227213747251	0
Merged-chr2-34600056-3	6.98258739815217	0	1.36720222690445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58126813-8	69.8403861389892	-1.16994330402848	0.238059149365507	-4.91450678180904	8.9006244496851e-07	0.000116026149750703	C57BL6J_F1_Control-BALBCJ_F1_Control	7.29477153961718	6.11310594105481
Merged-chr13-58593351-4	8.72803876461845	0	1.35891933810673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67977676-4	10.0397482957826	0	1.35088012994318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144589276-4	11.5795730069222	0	1.36405910419539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30674093-4	11.8363312513011	0	1.34940699883166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55291996-2	4.25431028321891	0	1.39179486294323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10430098-2	5.47939931151335	0	1.37405463934373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-101042477-2	7.04265949023588	1.77582403826903	1.28297079577163	1.38415000880903	0.166312526926931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.97019877533161
Merged-chr5-65086684-4	7.81401136236234	0	1.37210042804414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106076482-4	9.8849841401732	0	1.36110974738742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45298271-3	14.026430634252	-1.03187526268418	0.491221465887808	-2.10063145514054	0.0356733306069177	0.473776344603333	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3112316743891	3.44711359897583
Merged-chr13-42282747-3	7.62222704052079	0	1.40984850354076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92987928-3	7.94492396260603	-1.94032864715346	0.779825353729193	-2.48815794187075	0.0128406693061744	0.239701383552612	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95878273343305	1.62825810554086
Merged-chr5-120526426-3	9.70226878046209	0	1.36499044101062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115279986-6	28.4882759545205	2.1163517707318	0.389596663854902	5.43216091686039	5.56756803931776e-08	1.0329263858337e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00397722079068	6.17052838765179
Merged-chr17-84072054-3	8.92405560784651	0	1.34404318594957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20702127-3	12.9060877134266	0	1.35963010172919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69526429-10	78.9082529410797	-0.758045846698073	0.281016384083563	-2.69751477007355	0.00698591856148947	0.156032761859249	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18751345066368	5.38636543396904
Merged-chr6-108532225-8	41.3405905304365	-0.0844078331786579	0.320023736172162	-0.26375491452062	0.791968777624457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23354170675495	5.13068697386239
Merged-chr7-101360631-5	16.5150348723687	-2.58069601367391	1.07836102404171	-2.39316514241348	0.0167037208721577	0.286253960557888	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30807038797559	0.303163067301871
Merged-chr15-27723983-4	8.60492243749309	0	1.36111689665728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150156391-2	4.39493030971171	0	1.40007144722792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25395595-2	5.27434167614707	0	1.38493732792679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76497795-6	34.3901858481264	-1.14692263848348	0.571191313826286	-2.00794831910258	0.0446487838027909	0.54690117008617	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30117910058259	2.68534815693277
Merged-chr1-184738093-3	6.67736022933768	0	1.35347482094259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20398555-3	5.72976965966441	0	1.35253949352609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64488197-8	32.6826541597824	-0.25931377491243	0.463211121475847	-0.559817679001801	0.575603803663354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32224368052796	3.19054252986586
Merged-chr4-132514084-4	7.94113973905021	0	1.35215387034251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182539519-4	8.36263983494891	0	1.34922385423725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66939014-4	8.39980472820731	0	1.35779194255383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70385709-5	16.6935665046395	-0.696500087374541	0.538796185073307	-1.29269676859308	0.19611595583705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3719626198815	2.41420516037489
Merged-chr1-191107205-1	6.35070930774866	2.08043815052575	0.976928944727752	2.12956956772892	0.0332071657452622	0.452181443573825	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.64818605663689
Merged-chr14-64833944-6	13.3853906012	0	1.34353990487256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35099146-8	29.8430122168467	-0.523350340831281	0.46276215526799	-1.13092726981575	0.258085704462609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29531457461328	4.14737373429846
Merged-chr1-152613812-4	11.5134268909834	0	1.34279163345528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34194688-4	10.5731164729408	0	1.34879486691247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109352510-1	3.21063236010078	0	1.38338707189798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165618543-4	14.3199207829617	0	1.35576088633359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11049084-2	5.01701244948528	0	1.41286281819241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75317348-2	4.38063743387694	0	1.39737915763223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98993394-4	6.3641045983848	0	1.36848897727887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33158411-7	21.4556598801394	1.34007250535174	0.548588369522113	2.4427650672199	0.0145752218923096	0.261921329562178	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33663341065991	4.04955812999464
Merged-chr9-61013143-7	17.5813653158672	0	1.33744652782251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21613236-3	12.5500372803456	0	1.35880812917903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88255076-4	12.1370732362921	0	1.3481248043553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137879776-11	86.3731573319847	1.10898319184159	0.296803803540402	3.73641839697862	0.000186659986762931	0.00978461930611976	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79042731165911	5.77365406590376
Merged-chr4-150012721-7	27.0197735576322	-0.849704452542592	0.436120538934706	-1.94832477878279	0.0513761140640456	0.600721485138192	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4684946869868	3.52380923837118
Merged-chr17-87055127-3	12.5176857170471	1.26024978161224	0.563649172208294	2.23587622186114	0.0253598802817746	0.378511184029925	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6960750002622	3.79463359633015
Merged-chr11-101658512-4	13.1715423996076	0	1.36522747469822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76326611-4	22.1453903758566	-1.57883738035474	0.466921195734754	-3.38137868826079	0.000721230713409273	0.0280631091273498	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8090675101402	4.19083003274205
Merged-chr3-79158436-4	13.3218434979863	0	1.37175162066346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71178678-8	29.067888140573	-0.225769486545865	0.364829806949207	-0.618835090350218	0.536025002934606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16905881847871	4.11997879658019
Merged-chr3-95676971-4	8.95738397564656	0	1.35506395942974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5422612-2	2.43797850282169	0	1.62070663732181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93411164-1	1.58251598173016	0	1.64569105463375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53127759-2	5.62865846277695	0	1.3793500763617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59735280-1	3.75310288072473	0	1.4143206911814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142342030-3	8.45070038699415	0	1.36857002541467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96638917-1	2.42159923651942	0	1.45827686974856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-23567246-2	2.51634596085581	0	1.58193955029756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45264994-4	13.3627766995633	-0.156874683662713	0.744755068211889	-0.210639296539948	0.833168745996749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	1.92460482503279
Merged-chr15-83415534-1	2.96072299279583	0	1.37861964491163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117509755-4	9.15917895368067	-0.339805053744814	0.761824275405353	-0.44604125218248	0.655567447801352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77777167463237	2.06876131291247
Merged-chr15-63270559-1	3.08759156432184	0	1.41213614346584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93818190-6	13.4427111539333	0	1.34491469862411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77276293-4	10.7338283260561	0	1.35494846141318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66742745-7	23.6585722522052	0.746791814503556	0.425531805827033	1.75496121389128	0.0792659423180723	0.790288563905291	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87691512868838	4.52177331064603
Merged-chr1-45864707-3	18.7165797879937	0	1.37454415720188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30643426-1	1.14155768872539	0	1.93968404520911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88837588-1	5.33388200649743	0	1.39867892490063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32146789-2	3.13053776007884	0	1.52705839914325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64077768-1	2.85750242779136	0	1.39159424220982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92034515-4	26.8352368734627	3.8730292368577	0.489206748892595	7.91695790302359	2.43392107379369e-15	2.81501097128407e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31917258558244	6.56331896607718
Merged-chr19-37689204-1	4.06655512645668	0	1.41041181102205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96416828-4	11.1690889511317	0	1.3492867387155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67115741-4	8.89272305751852	0	1.3500868979891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45644642-6	115.886756224545	2.98719072131817	0.26528617712163	11.2602577101052	2.06154956036841e-29	2.24127545104133e-25	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86800163343593	7.91443296476054
Merged-chr7-19467756-4	9.45904207055367	0	1.37201651725922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121791670-4	11.4961828101883	0	1.34572275735164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64311813-4	11.8333041471989	0	1.39354358846889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19570421-8	36.2056321384734	-0.310286752779325	0.338870006532	-0.915651272754422	0.359849829820847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04082561662198	5.5412861301722
Merged-chr4-87826544-4	9.3019988965172	0	1.36318495939854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90084051-3	11.2540999690082	-0.699300335286353	0.787420959276474	-0.888089562575156	0.374492576590424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72678076939999	1.83259183103921
Merged-chr2-52885068-4	11.7986683102966	0	1.37183551179714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64628342-5	16.6499641484663	-0.230835153086838	0.542988039388366	-0.425120143248193	0.670749094502206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14583815693915	2.44574384900963
Merged-chr7-19202733-5	17.6962015857288	1.08811775804953	0.75058291253099	1.44969694870932	0.147143047014673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32643090402693	2.57366010732537
Merged-chr2-129489828-17	100.512592498636	-0.395882293498064	0.207899792956175	-1.90419763227718	0.0568844499885752	0.644338782439875	C57BL6J_F1_Control-BALBCJ_F1_Control	7.15729118702316	6.77147679098412
Merged-chr6-136543340-6	19.4723948350757	0.229841401786901	0.514980790294968	0.44631063161648	0.655372877590257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21837701399511	3.16496823093008
Merged-chr17-35218872-9	27.9431820591024	0.318287050761852	0.5522099997126	0.576387698389211	0.564353157447781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38099347700105	2.61211417470891
Merged-chr14-60990292-3	8.74668461359797	0	1.41374084665926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13442407-6	18.1862575560099	-2.27227154887222	0.671399981149338	-3.38437833284182	0.000713396283258408	0.0278936678371371	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70648213805822	1.71450075940727
Merged-chr6-32544299-4	7.6996085763867	0	1.35672649839995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-98774719-1	4.55877667968729	-3.46517725442108	1.1595756753088	-2.98831488811482	0.00280520373110951	0.0804686383215735	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36453465698696	0.41385117919798
Merged-chr5-5320007-4	10.6464795503694	0.119204678928944	0.750929999119323	0.15874273110509	0.873871570457845	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	1.93887912158102
Merged-chr2-130491801-6	27.5890293745061	-1.77613710566895	0.427839435991273	-4.15141045040359	3.30432554048237e-05	0.00235678835507651	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05640812046989	2.68107493164399
Merged-chr14-30671251-6	29.6374664868786	0.0710383869238328	0.492939518658486	0.144111770785107	0.885412210006566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79576564368745	3.35585753590232
Merged-chr8-25070173-6	21.9906280388436	-0.223329921566586	0.436810131385249	-0.511274591682074	0.609158793974396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84169146245495	3.27992178135976
Merged-chr5-64835474-4	9.83956825885674	0	1.35168144801791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11989488-4	5.52122082817277	0	1.39316114230955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80026255-4	10.35378490719	0	1.34483502780547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-143142024-4	7.9442516879848	0	1.35068650692559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89078995-4	17.6119867860868	0	1.36362272808684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139213270-8	31.743205878056	0.683857608810454	0.332980307036728	2.05374790748518	0.0400000971410806	0.507240561847799	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0271645263352	5.15835692378489
Merged-chr6-30157102-3	11.6109526236524	0.782572850996731	0.697008735261322	1.1227590292729	0.261539850243867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	2.81428474015231
Merged-chr1-4907193-2	8.17659214455985	0	1.34415696934636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102692754-4	7.82659785653246	0	1.36270243617761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25832739-4	8.67304512580077	0	1.36144060626759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36194042-4	13.6419920084678	0	1.34546935095558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19705860-4	5.73272238516564	0	1.49035989176683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98084882-4	13.9607761747217	0.502338226405567	0.645114520952315	0.778680699457854	0.436167828211766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11197723984608	2.97764809212409
Merged-chr9-55170972-4	7.8119768617128	0	1.36126181929397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17218347-8	55.550241011355	1.86257927693599	0.315348920721306	5.90640764736298	3.49648157502215e-09	8.96534160078439e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72356420727285	6.66213523656422
Merged-chr16-30948346-12	61.7217631703726	-0.62255753134995	0.304484457027775	-2.04462827898358	0.0408915193371725	0.514927884933812	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14250216364411	5.30259029324453
Merged-chr14-45663709-8	34.2744483376693	0.965672064860413	0.329679751967939	2.92912154627659	0.00339921472028747	0.0935584369519526	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81672673822288	5.79831592195011
Merged-chr8-95255024-6	32.538856571676	-0.0467595226053497	0.44796735923323	-0.10438153950633	0.91686657198828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59734910775349	3.50460381494041
Merged-chr7-99159074-8	37.4743480689489	0.32543843989011	0.294264087593509	1.10594005048848	0.268752468204686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68797644232574	5.98875313125596
Merged-chr1-177260585-4	10.0421403524003	0	1.36525556960015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-34111415-4	8.71165637469436	0	1.39306129067032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84707478-4	11.9027890604483	-1.1665272108983	0.733951143549694	-1.58937992147064	0.111974644871769	0.975140935691206	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72942046393685	1.28129123231014
Merged-chr4-16160217-3	8.76857966516665	0	1.37593771069824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148561281-4	9.75062981996728	0	1.35568684900644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4599961-3	5.72185365592606	0	1.39079259114016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129893519-6	32.0902683754517	0.0247425487164751	0.575868671335958	0.0429656099524825	0.965728947807348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77383438114867	1.98305351394268
Merged-chr4-62266276-6	18.7242356397126	0.428316594581141	0.670093151551523	0.639189631455602	0.522699576438411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52449471409698	2.86608700840683
Merged-chr8-13504240-5	21.8272810039348	0	1.3600437430294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14086384-4	10.1559800354812	0	1.39354207871296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52454084-2	5.17798462073606	0	1.40039995065634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78607648-8	73.0144016752374	-0.292396588942444	0.339308107282453	-0.861743597240492	0.388828628807162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62289104419417	4.30237889356785
Merged-chr10-99211153-4	9.87212414191608	0	1.36401000958017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144244498-1	4.65485795427806	0	1.3686124229264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150015485-4	23.7646283958334	0.331050632591243	0.339517726664042	0.975061407968317	0.329529800220538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.1256218581353	5.5213215225273
Merged-chr5-121996960-4	8.68049209036593	0	1.35853613175904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47687833-4	14.1585841024476	-0.756596774697396	0.691668997374902	-1.09387116896798	0.274011485115285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39776663243502	1.6454950719498
Merged-chr2-155585636-8	23.1471378352343	0.0409401356379357	0.421633335320789	0.0970989061070977	0.922647849558312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70200728481631	4.08514140177856
Merged-chr2-72366150-4	7.67890579562325	0	1.35740536619865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20666776-4	9.69174703991717	0	1.36223741926417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103746403-4	8.68660283694207	0	1.35811383265849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118649637-8	34.2156965447076	-0.262374000593488	0.360369791847337	-0.728068796356373	0.466571473886023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76747344460688	4.41445612065288
Merged-chr6-49031433-4	8.33048841507517	0	1.37830912301213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95679320-5	20.6859880466182	-0.662855318350676	0.534938807143348	-1.23912363339355	0.215299716009809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62577457863467	2.32666200292706
Merged-chr14-118691946-6	19.6428347500794	0	1.33932527258238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38812705-2	5.4179978026225	0.0165500084500375	0.884766801038944	0.0187055034508568	0.985076037905015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.49169296430729
Merged-chr18-52683226-2	2.73708929685677	0	1.43805983164357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90677833-2	7.54965272989643	-2.79722881375509	1.2206101794695	-2.29166433379313	0.0219250200184466	0.34218264805706	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0
Merged-chr11-21102792-2	2.42762607157998	0	1.55416251025361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23717711-2	5.08933334475504	0	1.45257338160564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130785115-8	24.811143173874	-0.286392268192889	0.351670458291585	-0.814376816250595	0.41542911581239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42476166219601	4.93164555037722
Merged-chr14-76959088-6	35.3933292478589	-2.70930030643032	0.659384079543394	-4.10883488164658	3.97660256806353e-05	0.00273972292772327	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13837516859103	1.14478899401529
Merged-chr12-85818587-4	6.15730482810754	0	1.37279365207765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13311589-4	10.1444566776397	0	1.35870856128082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-22108091-2	11.4075647023892	2.77429816803215	1.11302774759834	2.49256873785802	0.012682278009912	0.238085825148119	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.55809314683451
Merged-chr13-104611509-7	24.4725678902951	0.874324860218402	0.414964266272707	2.10698831509461	0.035118592448389	0.46929128822611	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35155957265927	4.19985567730135
Merged-chr9-51977536-6	24.892824275968	-0.0925705085654702	0.652009450071671	-0.141977249801049	0.887097975658612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9895274255015	2.00710682816156
Merged-chr6-66958662-4	7.06151328358692	0	1.3606598373594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77488159-5	17.9820266180061	-0.134129618942149	0.611257018179144	-0.219432439960697	0.826313202302343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92269452602859	2.95728003959365
Merged-chr11-45595538-3	12.5069659300063	0	1.36150372231739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55586192-4	10.8438289053589	0	1.3510619486723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73395009-2	3.81896381458631	0	1.39321045821101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53496806-1	2.73852001922808	0	1.42014160973308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56734195-4	10.0849415738703	0	1.34924615256144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40536326-5	16.5902152088156	0	1.34005558926151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32562860-1	3.975804476196	0	1.39777075353166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47636681-3	14.1424067599081	-1.16266514705358	0.711701587531734	-1.63364135674594	0.102334178589885	0.925141725126735	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77199277292191	1.61412912633251
Merged-chr17-29494583-9	33.7380268946101	-0.408126384120068	0.647005690995335	-0.630792572306771	0.528176160649754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44065710654327	4.37168288068827
Merged-chr6-134556299-6	39.4760586219313	2.27265239043886	0.315769486654808	7.19718809602168	6.1466944236494e-13	4.283694386861e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50847030541057	6.75634456174932
Merged-chr17-4742493-3	6.9625433444298	0	1.37174601274358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131384647-8	39.1911269467808	0.165600972298934	0.376373779927109	0.439990724994196	0.659943824941167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38136216026092	4.57250650509692
Merged-chr19-45805176-7	38.3122886593584	0.409107086451073	0.300743500661888	1.36031896134312	0.173729010601621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33954128310951	5.75410290632178
Merged-chr3-75499122-4	8.32824216719998	0	1.37303691973352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21493092-3	6.50166710056877	0	1.39267032812599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102646456-4	9.01047477148261	0	1.35637124324254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72147392-3	9.0193466477007	-1.2850479507531	0.944353332424983	-1.36077028229811	0.173586296040572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	0.97908007631626
Merged-chr16-87655238-7	41.0462688084411	-0.0578086598891406	0.396947459924027	-0.145633026346118	0.884211094675257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83606574038098	4.08312034049544
Merged-chr13-40922486-4	14.464095119158	0	1.35496948346602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19235255-4	7.62761250136663	0	1.35823494680427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53968635-3	11.9637767090176	0	1.3596961205013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191964395-4	10.571025424736	0	1.35528707469392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32562676-4	12.035009893865	0	1.34530875721849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191153273-4	6.74727041837947	0	1.35932055478076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6695478-4	23.2506854359359	0	1.3571514598089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150143740-4	7.55689860106185	0	1.36680116436513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150779378-3	5.91247637480175	0	1.40748579932289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55642549-3	12.9481933708492	0	1.3602072783043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44009077-3	7.03080539324351	0	1.35396405823792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34710458-4	9.30204836068581	0	1.35719708070048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52019813-4	9.0633814331461	0	1.37310639641101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14109880-4	7.62868022616171	0	1.35182328306399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80828552-12	51.4256335000327	0.127165459918057	0.279558000372943	0.454880417474773	0.649195271760803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99152119772781	5.04686898436812
Merged-chr8-35135838-5	32.854710459016	2.66635414204971	0.347962774717949	7.66275686878001	1.81983662882928e-14	1.73551753169352e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65049806320491	6.34929452142552
Merged-chr7-4073405-4	9.33126468380631	0	1.34638858221541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53516406-3	4.91854596659398	0	1.48716677133624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31155585-2	6.00845626540485	0	1.36316921554679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50896304-4	7.78037899026617	0	1.35288405014515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124710349-2	5.27915727571187	0	1.43872988051398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75794020-2	10.0640720243594	0.226367687324346	0.7325151464243	0.30902799543373	0.757300231119695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01243752527112	2.1304360554358
Merged-chr9-120013618-3	15.2515482823615	0.0367215493240307	0.685982460464727	0.0535313239629381	0.957308573507819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72875668119007	2.28370288107492
Merged-chrX-42058067-4	9.10359919569464	0	1.3568233403237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50038969-3	15.2614419641622	0	1.3445926906308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-111370741-3	7.69550525868048	0	1.35254598714958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35647613-3	8.44940497917966	0	1.35535360544321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74913815-6	17.8501930695201	0	1.35024504379801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104057296-5	18.1393301004751	-3.26266571186096	0.592330326483782	-5.50818616907385	3.6254987833809e-08	7.12436066356776e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00442531484083	1.39284430389808
Merged-chr10-93484806-12	66.5351941210022	-0.436072534738426	0.280573955986017	-1.55421601126855	0.120132899549973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.43851935745751	5.81099387560574
Merged-chr1-136430346-4	8.65416219671885	0	1.39140983250646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79168105-4	14.5994899425303	-1.32141279714703	0.556419059370389	-2.37485178642562	0.0175559980686136	0.294818195555071	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84098078813693	3.01614957321096
Merged-chr11-109367017-4	11.3395173774353	-0.397066175041299	1.07968903152936	-0.36775975623172	0.713052379085594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.723581231604105
Merged-chr15-80563845-4	9.40158549396721	0	1.34114385120894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106805056-4	7.71330965504746	0	1.35514488161504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83857339-8	37.2376974361952	-0.344050801091916	0.429725309855528	-0.80062959570053	0.423346111928105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33721732041585	3.94023293493358
Merged-chr2-103627356-7	38.2800202686516	-1.28680627425212	0.273594446547719	-4.7033347733821	2.55946234003884e-06	0.00028393839457586	C57BL6J_F1_Control-BALBCJ_F1_Control	6.34733433596137	5.13627574418671
Merged-chr5-140795061-1	1.8925114925725	0	1.49080243619587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-24585058-4	8.67240707664667	0	1.35842409679908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84465751-1	1.84386845257139	0	1.67713679313716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76199560-1	1.2162201363107	0	1.65720740118551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-156210218-5	16.0853587308519	0	1.33963362975067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57555906-4	7.91830682307242	0	1.36226944798942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128741136-4	11.5921206295758	-0.909253207366535	1.01028038035381	-0.900000856245578	0.368119795025058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.67591700901439
Merged-chr10-42615290-1	2.36773277023922	0	1.43300172973971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133182858-6	34.1292091824269	-1.31461210694924	0.459049317226683	-2.86377096668259	0.00418630585711138	0.10873064478047	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70161661799014	3.0484585143722
Merged-chrX-75155797-4	8.49476313711413	0	1.35212030221328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91712375-2	4.25441028918353	0	1.40110226667065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56026839-3	6.41752417592559	0	1.3855291846058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13682855-6	15.4998346718523	-0.0265959014865199	0.637059145069596	-0.0417479314006464	0.966699643512637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	2.03681675675745
Merged-chr14-63443621-6	18.8121616843598	0	1.33853641279349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110679943-2	2.770376700791	0	1.76101768032124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56485907-2	2.27574995385098	0	1.65941110051757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43910825-2	6.59407964749836	0	1.36587648930685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84745776-1	2.08672637644792	-3.21828469437604	1.20460679880687	-2.6716474600373	0.00754799007671066	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9272926343824	0
Merged-chr2-61645655-1	1.96102660450158	0	1.66268019501265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120742578-6	24.2691582203135	-0.949022767335684	0.433676691248071	-2.18831859421475	0.0286464033837724	0.411524908928344	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69578400889625	4.54687698409702
Merged-chr14-70778175-7	38.1741970505139	-0.676317848631343	0.369204706322258	-1.83182347638067	0.0669777244003168	0.713331136496243	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50608206073554	3.23440600950869
Merged-chr10-20590299-4	11.0368524771213	0	1.37963753474672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152363570-4	6.53968907351723	0	1.36844099777507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29708234-4	6.12905099782092	0	1.37524260764508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131566302-7	36.4999330004651	-0.163328391492624	0.393561406106322	-0.415001036581571	0.678141144292307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80107014601779	5.61563012998111
Merged-chr7-97781003-4	8.27055562655041	0	1.36188597002047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67479504-4	10.3821209236985	0	1.35534162586566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105232630-4	7.33601784809154	-0.993696811205455	1.0215324319531	-0.972751114035193	0.33067701456366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61477032079243	0.577068348605183
Merged-chr16-90349882-4	9.22049732566222	0	1.36771949511125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171111535-17	102.787486504494	-0.0720435744075053	0.199480981573551	-0.361155102803331	0.717983502956395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.21846022647362	7.14251207414712
Merged-chr13-37791025-1	6.07406818206818	-0.562565140023614	0.920489250436618	-0.611158837277862	0.541094431158625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	0.838451940269823
Merged-chr8-57800030-8	39.1983885705296	0.90375223329195	0.367392732570175	2.45990775857093	0.0138972728836721	0.25358907575815	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11836502757663	4.93317949795061
Merged-chr16-21689351-4	8.21763991639577	0	1.34950994736495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123941580-4	9.15948531608442	0	1.3514964034784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56810454-2	6.10271699869379	0	1.38828629740663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110436305-2	4.69664717129476	0	1.40419669025964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131060545-4	10.8825394263679	0	1.34096889713742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95681563-3	12.2252775040798	-0.726899832887653	0.644491455268191	-1.12786574119151	0.259376624102185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16823365037562	2.13795322910058
Merged-chr13-45105385-8	46.4786062684087	0.730369543609138	0.287527005084736	2.54017720316008	0.0110796316678174	0.215176026377593	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48683619320532	6.24914701227357
Merged-chr4-137818566-8	34.3293288416905	0.0911253878704373	0.332652999669479	0.273935265760353	0.78413436963382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63184554210197	5.81344001804642
Merged-chr3-60538737-8	24.3496256075875	1.177594649993	0.372132495837097	3.16444992889978	0.00155376394420946	0.0508495209170872	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50062481041637	5.03290127614174
Merged-chr2-129328449-4	7.22389549953729	0	1.37271987006018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101562550-4	10.6369598809467	0	1.35421998860231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122520470-4	6.66454788073983	0	1.40038410653601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61578971-4	10.5228592510451	0	1.34288935624183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120509279-5	17.3367811593039	0	1.34441578719423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122269440-4	11.9822529887898	0	1.34309145560851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105891200-4	7.65495219764956	0	1.35520105920107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73179306-2	9.49969998853178	0	1.37685328236478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125409050-4	9.80899816845235	0	1.36399741673308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79622448-4	11.9170547548552	0	1.35343417450767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82793747-8	40.0795563288477	-0.0327291882729774	0.365202754213819	-0.089619226293718	0.928589805512323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13255354998206	4.45018510081789
Merged-chr2-146959439-2	8.67946556004067	-0.087590458831962	0.64909368605841	-0.134942706597334	0.892657173355576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77249093293001	2.66944007095039
Merged-chr10-118096611-2	18.3671426729477	0.884274936385029	0.512811805083721	1.72436540582498	0.0846418986122412	0.821034192605726	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66171529289243	4.14299178278721
Merged-chr11-29318901-5	16.5470415700639	-0.748316378804303	0.430410282615403	-1.73861175959165	0.0821030766329738	0.806622292190823	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32721480380302	3.6502490315645
Merged-chr10-93353780-1	3.94173605949989	0.219526574457624	1.06738289309705	0.205668065206347	0.837050205515341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	1.90216338684418
Merged-chr11-34066834-4	8.26099565325722	0	1.35225766795265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-89394284-1	3.93050712124186	0	1.40191904536818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160026087-1	4.33844796324782	-1.43125650204526	1.22035638020142	-1.17281846947777	0.240868609949774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.601513806634888
Merged-chr1-65107840-3	9.15299179159399	0	1.35496564018268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33968694-6	33.0627238855132	0.459770888886685	0.4690105203281	0.980299735206469	0.326938185398431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05918156235269	5.98249346910158
Merged-chr9-64775667-2	7.65320784663045	0	1.39073657924622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80426630-8	69.1668357282245	-0.248184150227538	0.337947461308851	-0.734386786828742	0.46271303747626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58102505072608	4.23969670830067
Merged-chr2-11524052-4	14.9350035874614	0	1.35604211293531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117121446-4	7.37038747750331	0	1.35276872996404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124047166-8	34.1051466000758	0.98012036040045	0.321213452993224	3.05130545208244	0.00227848651735616	0.0689622765016501	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65317114989729	5.57979083346356
Merged-chr17-50576235-9	44.0388677244662	-0.915164823701269	0.315949207156433	-2.89655679765056	0.00377282340545353	0.100779807123857	C57BL6J_F1_Control-BALBCJ_F1_Control	6.42352600074367	5.45927878463722
Merged-chr14-34549563-4	9.58662647583733	0	1.3487661462698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-98351528-8	47.3237932078201	-0.899919274408855	0.233590561498846	-3.85254981466064	0.000116894185916103	0.0066886853181194	C57BL6J_F1_Control-BALBCJ_F1_Control	6.74061990738954	5.83780161283723
Merged-chr15-53157466-3	10.9204748686681	0	1.39261156500808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63668474-3	9.11246947631505	0	1.37153380634629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21812983-4	7.008793073739	0	1.3513183260973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191092388-9	39.1832877359121	-0.137052384091997	0.312319044078091	-0.438821732746239	0.66079071172167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21526550619201	5.19342185486635
Merged-chr1-64222809-5	17.9071563349192	0	1.33614225404495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73240293-5	29.5478545730518	2.17292141154307	0.466630968352952	4.65661638191897	3.21448600277332e-06	0.000346012365593574	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35581482466048	5.32047984868026
Merged-chr3-8983884-13	133.950059163943	-0.000223484000921779	0.211459343070999	-0.00105686510549095	0.999156743806459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.90405874507831	6.90218905093187
Merged-chr18-53903703-6	56.8363539517186	-0.37534579075523	0.577195641359199	-0.650292143356028	0.515503531072389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80893118508525	4.5073825414334
Merged-chr8-22433190-3	7.51870169296057	0	1.35662196085077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63112173-2	5.38535600659329	2.76670027264494	1.2659489210613	2.18547543792327	0.0288540049563284	0.413736443002126	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.948471875794396
Merged-chr3-135612921-8	29.7777013544565	-0.370569603535893	0.386752464666449	-0.958157057526413	0.337983567487299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19496876540094	3.72646662840367
Merged-chr15-66476119-4	13.6117732483128	0	1.34591963986579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13380175-1	3.23261300079541	0	1.44647316537206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32198925-2	5.91663526961733	0	1.37208275376087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117878070-3	5.32243353210765	0	1.42547427700332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80005122-7	22.4711710763855	-0.215294212030622	0.396856199378667	-0.542499304200602	0.587474586655097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26326342612877	4.15264504059397
Merged-chr6-4978470-3	6.59512486771985	0	1.40498654661985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-70378189-4	11.3172668009528	0	1.38579099523457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27574308-3	9.55590447253764	0	1.40099855646083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40814099-10	68.7789379066109	0.432774482025675	0.252822968431846	1.71176885039359	0.0869392746551706	0.833791819156742	C57BL6J_F1_Control-BALBCJ_F1_Control	6.83335790436072	7.3187150003567
Merged-chr11-62494945-2	7.88237123495179	0	1.39947981126249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59254592-5	35.5827213427465	-0.666660077579526	0.488891983337147	-1.36361425488908	0.172689003266986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56182420340202	3.06066185834148
Merged-chr1-120099653-7	44.4745680927274	2.91342480255614	0.395389819682202	7.36848714237972	1.72575173154011e-13	1.35956722282303e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99094309178896	5.83508906359672
Merged-chr1-191955428-6	16.7788542204068	-0.554130299833804	0.583118218972312	-0.950288092199219	0.341965887784402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92154036844959	2.54428723463378
Merged-chr8-80916064-4	13.9034840100043	0.44399646666829	0.840443073506403	0.528288566667458	0.597299065917388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	1.93939140359756
Merged-chr8-33673879-7	39.2833131110358	1.567009623259	0.390487803428465	4.01295407820867	5.99635820481707e-05	0.00383477689006649	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1665479039597	4.91458680111695
Merged-chr11-53737201-4	17.7557336576605	0	1.35566820638897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26133043-4	8.3749110928836	0	1.36229279525722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83859932-5	45.316548740512	0.204468436331108	0.53727925541594	0.380562685549468	0.703527773976341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93171244472175	3.1682726129075
Merged-chr7-96879003-3	6.88720726832684	0	1.3706655972273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39623355-3	5.76683490114793	0	1.38331658610742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19266245-7	87.2595575216107	-0.81935336312378	0.415751420823933	-1.97077706072535	0.0487493816517553	0.579835488381549	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61798371509454	3.70127866619281
Merged-chr9-118659976-7	26.0623268751279	0.363905080528192	0.386184412616901	0.942309085087775	0.34603441814001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12097626098931	4.47074157722865
Merged-chr11-110130982-4	16.8294988840801	3.45028135723469	0.779436826076269	4.42663374606459	9.57150447410292e-06	0.000854347145661348	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	4.30085617226671
Merged-chr3-54668927-4	13.3724052722048	-0.0149500210824773	1.01263415553407	-0.0147634967680826	0.988220861765309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	0.815004392037195
Merged-chr16-13866853-4	8.60201821601578	0	1.37136351257629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64624495-3	18.9212576423813	4.06411928956847	1.07420283383919	3.78338164966791	0.000154711906612954	0.00839042011625509	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.22803388328802
Merged-chr19-44280933-3	6.65785019035948	-1.45708486345753	1.07365566723031	-1.35712492182559	0.17474152098172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99596521771025	0.878778741524029
Merged-chr12-16216461-5	19.1849551896475	-2.515776201065	0.547089521333358	-4.59847265020466	4.25599572499508e-06	0.000438997479345365	C57BL6J_F1_Control-BALBCJ_F1_Control	4.702287050517	1.56203317187393
Merged-chr1-165643882-3	4.9555868659617	0	1.37656584824027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102499132-6	22.2831245696856	0.0180251936749199	0.711264429761117	0.0253424646596959	0.979781802896051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	1.92632874823057
Merged-chr3-79172575-4	8.7582930447806	0	1.35148092472583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97355710-4	15.600167333835	0.801680277267513	0.518356246824083	1.54658168427472	0.121964149103454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91736041455309	4.2915144736249
Merged-chr5-43082437-2	6.11066270719288	0.491462166950943	1.23404941586357	0.3982516102137	0.690444726032839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.723581231604105
Merged-chr18-62235588-2	7.04651635558182	-2.04039736054371	1.08366683633386	-1.8828640797448	0.0597187902349733	0.664497320297098	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	0.465515277017237
Merged-chr9-84545529-5	21.6444045934944	1.94596544378428	0.415851525311772	4.67947169924495	2.87615054604494e-06	0.000312689335064914	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74752752051698	5.36101756890138
Merged-chr15-88128569-9	117.034610924761	-3.18932585625676	0.224200236030706	-14.2253456674325	6.37883769928296e-46	1.73373619247661e-41	C57BL6J_F1_Control-BALBCJ_F1_Control	8.00915537597892	4.75416163121134
Merged-chr17-43052644-3	8.97694472839182	0	1.37148640212092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119996131-6	22.8519877213515	0.0818095648973664	0.651464907888895	0.125577853705849	0.900066094338216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.173597744938	2.54444516623674
Merged-chr18-54668717-5	60.1244901566922	-2.97362316971988	0.307133115361839	-9.68187089241939	3.60065642370414e-22	1.63106735446778e-18	C57BL6J_F1_Control-BALBCJ_F1_Control	6.86967582850062	3.88445916789136
Merged-chr7-80033484-5	21.8109919595057	-0.148190789901395	0.502612941349852	-0.294840776489765	0.768115515170681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81612143306626	3.73689020051097
Merged-chr8-126542241-3	11.4304396684027	-0.861731551921292	0.777330723147068	-1.10857776009743	0.267612376685197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25104685314663	1.20027794713453
Merged-chr3-144607263-1	4.48452671184361	0	1.39772617867125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99655677-4	10.1719825813969	0	1.35427103471309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31417144-4	13.975125919662	0	1.35241771000574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16405746-3	8.27354356006404	0	1.3693358788221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51866603-8	50.3958734169312	-0.64574081139585	0.307144645990558	-2.10239969937715	0.0355182775116711	0.472640892841353	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14091319018154	4.34991326245372
Merged-chr19-16222687-3	6.95536303340744	0	1.37843792363712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109147282-4	8.40064077993964	0	1.35230610185756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-5431830-4	12.0639338737609	0	1.34468590765892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12442714-10	76.2510520185012	0.0295755837562642	0.213173004640895	0.138739817483393	0.889655752554916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.13158794522814	6.21832520957185
Merged-chr3-36841020-5	12.8715411129986	0	1.34684864005907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51408562-3	5.86691368864662	0	1.36382654361357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37742433-3	8.13814461698323	-1.27909238637005	0.801958823030241	-1.59496017705365	0.110721141304022	0.968307815001739	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79747371962553	1.58059388295115
Merged-chr12-77288822-6	14.2642564811164	0	1.36932772196933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46281121-8	38.415673473361	-0.418444994067958	0.39013946820146	-1.07255232595919	0.283472024650975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32308000333877	3.36093537791492
Merged-chr14-69141089-4	10.4039472250208	0	1.36752023590471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31184641-4	13.3545266778354	0	1.34639930860693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43069051-4	13.57248041905	-1.50925269966388	0.561522277832066	-2.68778774991942	0.00719271000347658	0.159522041239895	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74623763284035	2.08268716725539
Merged-chr5-103706198-4	25.712089651429	0	1.35980146731691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44066569-2	4.63724729265589	0	1.38732033411751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106392006-3	4.36711913990952	0	1.46930336578269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30665422-2	3.15528935224106	0	1.40909416311343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47522659-1	1.68537702503527	0	1.51305599055184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116263560-1	1.12551025779989	0	1.85443531627227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121306057-2	3.01769319473784	-0.0370279304844694	1.26195826168822	-0.0293416443384857	0.976592113808677	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr1-165703213-3	13.1250580945856	0	1.42960938357597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124380380-2	6.56942416442391	0	1.36662590955843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37970257-5	16.6973315823613	0	1.34407151526228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37771154-2	3.88302683206368	0	1.48198450252449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113596151-3	12.9520635212217	0	1.3726239415916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22813592-2	3.40545327968034	0	1.44838194782999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20690684-2	5.34711777442961	0	1.40386678476933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83728672-1	3.17029184217692	0	1.42020492315622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126688186-4	7.91497550752334	0	1.34889997892369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8917295-4	9.54270620374903	0	1.35557198397432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116071649-4	7.62530024990851	0	1.36031444216817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66355695-4	8.83953100347315	0	1.40671212944675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69537477-3	7.07621822822603	-1.13592837297819	0.830732459783859	-1.36738171188561	0.171505691577016	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07906840187467	1.79957942362569
Merged-chr8-82356605-3	10.3589231403806	-1.06623312454514	0.88766060560074	-1.20117206713657	0.229684462324352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69735600200997	1.57101387507464
Merged-chr17-87387239-4	8.30134837765046	1.77946079572061	1.04187602716289	1.70793909191501	0.0876476446447483	0.838541052208731	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.46494528794689
Merged-chr11-4297087-3	8.15771744763092	0	1.3916305118557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69559290-3	14.7721606090884	-4.04365589196122	0.693224526565209	-5.83311140475185	5.44032177194317e-09	1.34422932364118e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53255941217164	1.39949824061849
Merged-chr7-80203705-4	11.4683562598753	0	1.3586830512512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84801865-4	9.53878152635125	0	1.37226807119828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24212431-4	8.16290039773984	-0.121343804372744	1.18711664420515	-0.102217254694454	0.91858423222541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.577068348605183
Merged-chr11-90492802-4	6.6389038993633	0	1.38227196931829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75178776-8	24.7932021900514	0	1.34263556982126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10848358-4	13.2763519900928	0	1.35425905259488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117219028-3	8.7267765381581	0	1.34977713213174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107466151-4	9.21839563943471	0	1.35103562504261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67189073-1	5.68017084446102	0.293202978354955	1.13965717750762	0.257272962555439	0.796968062881511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63657599924846	1.70863195646908
Merged-chr5-67643786-4	11.1814211068215	1.72651304527667	1.29246030445597	1.33583448507024	0.181603378629485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.859510663435501
Merged-chr11-34827112-4	7.19873952045247	0	1.35839702559783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28880961-6	14.0268274302632	0	1.34308067150129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111189275-3	9.02023446283606	0	1.36796972996019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76396147-8	27.0029429592562	0.257573061449832	0.369541392200446	0.697007336353054	0.485798202599891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04662701284231	5.25260642401083
Merged-chr17-55721473-4	18.595520054213	0	1.35209281951502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11592127-4	11.1151214217595	-0.060047959359641	1.3373568877804	-0.0449004748906644	0.964186638319908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.55634759613363
Merged-chr7-45097761-6	26.0943572421846	-0.961681118676462	0.36929220182717	-2.60411975643757	0.00921105656950201	0.189818312240694	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53327409533881	4.61614813290404
Merged-chr7-128068059-4	8.09276682384588	0	1.35481601479919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85418864-1	5.9685908516895	-0.420021821930301	1.04769205255818	-0.400901983464247	0.688492289547169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50243936158991	0.662147012823607
Merged-chr17-31074102-8	45.7512850412303	-0.76747267738455	0.346154033925589	-2.21714208752953	0.0266133835346328	0.392559216323983	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35647971613831	4.58149639272585
Merged-chr6-129171827-4	10.5364375452949	0	1.37660998608706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46834328-3	12.8721668132562	-0.774707270909261	0.510645510215046	-1.51711364422456	0.12923799397321	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21351898572237	3.34808032874744
Merged-chr6-120480533-1	4.0168081051712	0	1.42021896743403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-136327286-3	14.2629882382137	0	1.35519420737089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86364037-2	6.98001600734547	0	1.36437796661387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140492071-4	9.80599281470021	0	1.35962104469424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5635182-3	7.58210176363875	0	1.35928949168262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95840047-4	7.54027457688244	0	1.35472602924939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16621023-3	8.25623615681591	0	1.36909108277193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34272670-1	5.36072447646423	-0.118386769859306	0.774083290443353	-0.152938025301515	0.878447148779322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46812004905329	2.37618163600509
Merged-chr18-58160686-7	30.3674967155874	0.199982039247485	0.281503088341089	0.710407976075817	0.47745117846846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52090194096473	5.6683330339638
Merged-chr1-71938729-4	14.487181674139	0	1.35524799013996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146686937-8	49.3232852438679	0.582565491544697	0.363370361942141	1.60322787040474	0.108884354420351	0.960572215286905	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83020717129843	4.26883563393665
Merged-chr2-31447711-4	8.41198765810628	0	1.36443088356371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114526453-4	7.16844743484429	0	1.36564233448366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33917677-3	9.39442828919622	0	1.39915950036235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47589989-6	25.4849725816421	-0.680445110208872	0.535054977207365	-1.27172933473182	0.203469304100774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40594141276558	2.6518013600863
Merged-chr9-114592494-4	9.671581046771	0	1.35440559623915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21268348-6	24.1627020678834	-0.221219832077316	0.620763968470353	-0.356367062705704	0.721565692508174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23310585692455	2.22579715664289
Merged-chr4-88395915-6	14.080968135995	-0.523875270053958	0.612052889477742	-0.855931373023947	0.392035740308585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27543767220166	2.9033993203239
Merged-chr3-133585050-4	11.8174492312664	0	1.37202285414244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126613748-8	28.2807699051561	0.41825577449304	0.395796531065762	1.05674441705389	0.290628247723678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98774208624789	5.42859459660792
Merged-chr5-21611204-3	7.91148660290214	0	1.4138252560795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55732191-2	2.74354001644601	0	1.51890953578465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193875433-2	3.16000509214023	0	1.40414412146015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12252344-2	8.61934566453366	0	1.35954924678317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135312910-2	4.1729296423406	0	1.39127149569595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96001216-4	9.19095710049109	0	1.35124438610653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40678577-2	2.86248684104482	0	1.49125209354408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93214954-2	5.29159194935255	0	1.44749610456722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34557171-7	18.5717192833993	-0.247787312103749	0.474345579243224	-0.522377192803339	0.60140773250495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16713058248203	3.61952427551636
Merged-chr18-34889074-4	8.29726202302302	0	1.3532147462862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180745446-4	9.66304533523244	0	1.35280117097806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136813311-6	23.9430286615148	-1.15973737751772	0.396052354051828	-2.92824260644579	0.00340883945177627	0.0937284288108783	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52967910257215	4.4344542759833
Merged-chr13-56187359-1	7.70188932231381	0.954551385998862	0.829040735686538	1.15139262150778	0.249570747960737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	2.16080982730713
Merged-chr7-89216354-4	9.88952818929681	0	1.34657254125434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96766751-3	8.1586540576013	-1.95991991488026	0.996335599701754	-1.96712826026386	0.0491684259782378	0.583314375327593	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69733277475078	0.577068348605183
Merged-chr10-80940839-4	7.40237235402749	0	1.35369811157203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35918836-4	6.68553616490752	0	1.36456777807505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88823977-4	8.67774498605469	0	1.35745186778511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147063607-6	45.8826860133839	-2.08878151030992	0.294146114980075	-7.10116980620807	1.23705268453108e-12	7.55561200881182e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.56781938115391	4.46291763560636
Merged-chr19-9952498-5	30.0576291878184	0.309198680941026	0.491816065328793	0.628687639014635	0.529553572148231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27620127671797	3.51693576905617
Merged-chr6-86599433-4	9.5790036330701	0	1.3520995825343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59455175-4	10.7798780746127	0	1.34596452934344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94122255-4	11.61821573561	0.64445040579264	0.571128419498801	1.12838091012558	0.259159086350677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63228770631367	3.73261560959739
Merged-chr4-150605977-8	24.6321675178552	-0.328476805194184	0.381376008095976	-0.86129383658429	0.389076229406538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40748126875499	3.99588065947539
Merged-chr2-115765091-7	33.6877186325748	0.497735629792536	0.372342447426039	1.33676843248286	0.181298236393685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81435011711971	4.49838692091908
Merged-chr9-95682024-2	5.00335956700669	0	1.36846916468051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134074869-3	10.3466928193364	0	1.38834566663341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98091794-4	12.4462908389506	0	1.33949236739746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116397617-2	5.09265109539055	0	1.38610103836188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98813478-1	3.07606103869946	0	1.44548511621719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75051957-3	17.8190515556572	0	1.35916250163733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50825572-3	13.171153263209	-2.59534575023011	0.62022066951818	-4.18455217277153	2.85728820708411e-05	0.00207646162632199	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48713643265438	2.95327647150256
Merged-chr13-67724224-12	54.8350341021192	0.381968465130831	0.237287084063704	1.60973137934589	0.107456511427412	0.953598740214201	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68320646851694	5.96128314991662
Merged-chr10-75484882-1	3.0709316196272	0	1.42316038947416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131239719-5	15.1895263174388	0	1.35005958244094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52677333-8	40.1378875112787	-0.587521351059365	0.257625467168078	-2.28052512633022	0.0225765623091186	0.350339523426029	C57BL6J_F1_Control-BALBCJ_F1_Control	6.27840356596334	5.69385852917889
Merged-chr13-44532938-4	15.4770615162352	0	1.34796871041753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81045546-4	8.88450045482216	1.79215914566392	1.26063069753478	1.42163692282647	0.155131680201193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr3-119933445-3	9.37907844062533	-0.265559238025379	0.584150144665763	-0.454607844319419	0.649391390359317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47679065818919	2.40224588862592
Merged-chr4-108347229-8	36.2076859926514	0.0837211866411586	0.312291384912475	0.268086763471311	0.78863253425358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17422035076606	5.26442993183714
Merged-chr14-60273524-2	5.06020546507892	0	1.36940922154949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70476566-8	39.031282994405	-0.563770956497045	0.35606546343831	-1.58333512903231	0.113345100150205	0.982433027438486	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24900388674161	4.75761389148172
Merged-chr3-136708448-4	7.16715403048667	0	1.3526731042867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4093028-4	14.8710075096601	0	1.35869481662931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81658050-4	10.8894916795957	0	1.35397395371326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25135686-2	3.83267876685415	0	1.42064704215693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-78919668-4	8.01743704905962	0	1.35130865111338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131698976-8	29.1605775896359	0.593693897115281	0.332645253241805	1.78476587694974	0.0742993003842831	0.759483953055552	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53999638423925	5.16165505430506
Merged-chr4-16083265-3	5.19194484119167	0	1.38716901908005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65345534-7	50.748175514129	1.05266888582382	0.416636227772156	2.52658990182554	0.0115175905903148	0.221281636524893	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18658330263614	4.21806010498214
Merged-chr10-93090430-2	5.30172919058741	-1.05231028185753	1.02395063625906	-1.02769630155422	0.304092708101159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.841757702988201
Merged-chr6-33859767-4	6.65475608310726	0	1.357329492294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32590343-4	11.3562382727649	0	1.34962830819032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88738819-5	16.8998714476681	-0.688402777178092	0.489387171209779	-1.40666289938974	0.159527372030151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91584784051865	2.83252688894266
Merged-chr3-127321889-1	7.3974419035472	-0.219193104064	0.905364881191278	-0.242104712274223	0.808699026940785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91274678318511	2.59883124944459
Merged-chr4-58304742-3	10.5869126976813	-1.86749248758288	1.06057830722919	-1.76082470747661	0.0782680766252947	0.783675516167691	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84263888870065	0.465515277017237
Merged-chr3-8691602-2	4.12536702354613	0	1.44383979128962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145029263-6	13.4524589202089	-0.601579823620449	0.58962794553232	-1.02027020289437	0.307600330925009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4788926558196	2.49233917051521
Merged-chr2-30708005-2	4.83677182146247	0	1.37313313026938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12934108-3	8.21357864927032	0	1.35574457391216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114281862-3	11.8869639495111	0.496138311729806	0.529465805773351	0.937054492131243	0.348730528491683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39274708187805	3.9104389586142
Merged-chr8-11113428-2	5.45619821805033	0	1.37838093640105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75600322-2	4.54240062025141	0	1.37335858075861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-6753578-4	10.0457132876343	-1.63496610535659	0.858418750155257	-1.90462534172381	0.0568287900187756	0.64415119585582	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36173837884825	1.13743241080208
Merged-chr8-117298382-4	9.70038024739182	0	1.34561609628666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99237335-4	10.1049862402256	0	1.36706866872118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35478384-3	10.7304876765478	-0.0348648539374388	0.865428289399827	-0.0402862425049886	0.967864921766234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.25298535761957
Merged-chr3-109030867-4	7.35000427266653	0	1.3770455074366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103374115-4	6.45491306160715	0	1.39918106560597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17586992-5	32.7494326046842	2.27871786923827	0.372266543963144	6.12119973226461	9.28733992433727e-10	2.64319639239293e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3965928268399	5.63232468339868
Merged-chr2-167715206-4	14.0078013636886	0	1.36527371493555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101144917-8	23.9142108892891	-0.271473507434555	0.34001101835157	-0.798425617942335	0.424623541838567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85488846804154	4.35042218510691
Merged-chr6-134559782-6	27.6750454954744	-0.793707049212382	0.366411827770039	-2.16616110359438	0.0302988782700836	0.426026053772238	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33704438904629	4.42294871654235
Merged-chr3-87349918-8	33.2768682417288	-0.92457196263945	0.371489380440521	-2.48882474525401	0.0128166127062318	0.239662280735485	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18240088854218	4.29496666983236
Merged-chr3-27193619-1	3.76458003073753	0	1.38388713359559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3961602-3	12.3775093567123	0	1.36420768013535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115312431-2	5.29121857837875	0	1.37105289792513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100067298-1	2.98249548983524	0	1.37965265039875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56299923-1	3.69821753941454	0	1.37593098901532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125219165-3	8.18529523594559	0	1.34773897394563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17609751-5	30.0554375045601	1.47887546899879	0.607115017407738	2.43590658540007	0.0148545201123968	0.265268350456563	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69442907999601	3.87730728611483
Merged-chr1-173489725-2	8.18860646291147	3.87706897781135	1.08182521676572	3.58382196839747	0.000338602921679172	0.0160752106721031	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.33494576651626
Merged-chr18-49609438-3	8.21738464267382	0	1.41433853097785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77921117-3	6.71308697270839	0	1.38954405630398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162573910-4	12.0243398960279	0.22654343067454	0.73724661154516	0.307283108700546	0.758627891465453	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15118048328457	1.96810020246567
Merged-chr4-129782979-5	25.5290661206586	-0.778569710096033	0.463520582273872	-1.67968746129166	0.0930181406431725	0.869368009975488	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48730442305013	3.59702858307334
Merged-chr6-116089668-1	1.97810398920821	0	1.50484239921734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103282488-2	6.18621518930566	-3.44731690257927	1.14541574673256	-3.00966431831689	0.00261536565715458	0.0763526647461149	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08153858449613	0
Merged-chr16-11016568-1	1.86917309804353	0	1.49506604652116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81675759-1	3.29439812596686	0	1.42268921139164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33669156-2	2.54871439505213	0	1.47836845779725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86671408-1	1.91876488103563	0	1.54361715092572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125540567-1	5.43268431279892	1.79149047914696	1.08206600143897	1.6556203380982	0.0977987288378887	0.898317185011624	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	3.10644919903249
Merged-chr3-37705069-4	7.10609377540899	0	1.3684980866135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76129011-1	2.64068089563809	-3.28684773106553	1.40370659458265	-2.34154897024101	0.0192039064775214	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.39589217010968	0
Merged-chr5-43801961-7	37.3739296489778	0.663170018674742	0.38377164898533	1.72803285606981	0.0839823339726115	0.817667284292425	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50522800598996	5.0542320095681
Merged-chr18-61452463-3	6.19373396024108	0	1.37329410017282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112343794-6	20.3341997328751	1.10616728109958	0.65411435380392	1.69109158768158	0.0908193116335808	0.85619961170479	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26927213904674	2.66847237490289
Merged-chr10-111672927-9	21.0874192673651	0	1.34427033956362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40965088-3	13.664365223418	0.978744269173995	0.564446605661776	1.73398911315355	0.0829200148585521	0.811714224328478	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10987414329683	3.54294580838872
Merged-chr19-21785248-4	10.0139728599331	0	1.3568850774391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56264232-4	7.18199591630021	0	1.37247669057872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16114917-3	5.28469850582656	0	1.37678629348884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15960954-3	19.0718603830022	-1.1097024769222	0.521927546181053	-2.12616192619435	0.0334897791024782	0.454469604877179	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07991891372579	3.09124198412392
Merged-chr12-117586298-4	7.50718791777345	0	1.35526869178694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62186229-1	6.90858704659669	-0.383967246922672	0.858092466173527	-0.447466050640077	0.654538594854775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	1.54667940924561
Merged-chr6-87537076-2	4.54309982317209	0	1.38658956100279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57849295-6	47.6190420868777	-1.55189173811671	0.458645489122429	-3.38364112353114	0.000715314353924264	0.0278936678371371	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08257823397251	3.33617117956233
Merged-chr3-47885690-5	17.0693654812169	-0.302451897633283	0.620730560409711	-0.487251501575257	0.626080112122232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00378373882687	4.53065493777659
Merged-chr8-31123487-7	32.7190221022768	0.536194845782692	0.375652770931087	1.42736827004813	0.153473771726938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04835575673681	5.68549994444234
Merged-chr3-126831614-7	43.6582374226829	-2.82004502800262	0.810655118592411	-3.47872352042781	0.000503808083981225	0.0214967394875355	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54650444114996	0.97908007631626
Merged-chr2-128710131-3	9.41514603749537	-0.828803318637215	0.750746998492687	-1.10397153808306	0.269605484321589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20651442883605	2.51422793285658
Merged-chr2-118567365-5	19.9328873544886	-0.745321536528129	0.495537066076763	-1.50406818692483	0.132563810624951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05533023557349	3.60106347715182
Merged-chr6-94222443-2	3.8072858609447	0	1.39240630225907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118766156-5	29.7941283914035	0.386239493375886	0.554341795626067	0.696753332372623	0.485957176093847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43067782037622	2.4184213871364
Merged-chr2-49349898-4	15.7620920406586	0	1.37792974010321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61674291-4	7.74875599663453	0.532758506708983	1.22937171784784	0.433358356121645	0.66475444926723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.723581231604105
Merged-chr3-135670780-3	8.95519573452259	0	1.35656689290594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38114656-3	15.0104452854901	0	1.36648834793392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38095474-4	15.3722591776277	0.0886121511034625	0.691231145484497	0.128194673637503	0.897994915113834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70275322934241	2.33877259814021
Merged-chr1-13328525-2	4.25677511065969	0	1.37446021773104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77816204-4	7.27477290044152	0	1.35273218358758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64193364-4	6.44633309168887	0	1.37804063899052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4921519-4	9.02373867653317	0	1.35870278123306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27025514-9	48.28792218041	-0.357668094436097	0.275508796722723	-1.29820934464049	0.194215407902394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79223795660011	5.47748598616297
Merged-chr2-114139249-4	15.9595331455919	-3.37890787085119	0.703685109012119	-4.80173280289352	1.57298494402122e-06	0.000186287338936927	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64070353491171	1.32509503823899
Merged-chr11-49237813-3	9.15591708474917	0	1.35428840655494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154093558-4	11.207149281393	0	1.35399815606568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60859770-3	9.85921322584599	0	1.66310369165812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17874279-2	7.36601609161225	0.814146144729697	1.0078787340086	0.807781846424743	0.419216177345462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.45451904642141
Merged-chr12-76887008-4	7.80610677348289	0	1.36045067669486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31442662-2	7.70646985031269	0	1.41495499926874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172427040-7	30.2580028091447	-0.670645663404268	0.355854954893471	-1.88460397749705	0.059483324912748	0.662728849955332	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12183171249329	4.45591537303196
Merged-chr13-56613710-8	35.7368573600155	0.24862023338097	0.334112239446602	0.744121896859468	0.456802733248197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67468301082581	4.86723096581482
Merged-chr9-96393900-3	10.5285278750771	0	1.34583654149086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55636916-5	13.3533519369236	0	1.34385233132139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111550433-6	14.0633689979651	1.02547914569301	0.787218887946087	1.3026607483575	0.192690608211271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.13118170172995
Merged-chr1-184616116-4	11.887394991556	0	1.34843659300054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37844081-8	24.720541732331	-0.155612431767789	0.357969676692944	-0.434708417778272	0.663774087516265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37343274121978	4.16235323532707
Merged-chr14-75147901-4	12.8310894785802	0	1.36706719663899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88112028-4	11.062166631494	0	1.38172611104006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44281147-4	8.50412346133979	0	1.35320945674323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181257054-4	16.9536262223905	0	1.34293869348956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66075343-9	54.448848611603	0.649511175720127	0.348699742179475	1.86266606238506	0.0625092634941018	0.684516731320685	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10823302057479	4.6010460867405
Merged-chr5-64900420-4	6.90361871518711	0	1.36309133366544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28671337-4	13.6817256011102	-0.0377578766813167	0.547129100818507	-0.0690109091708534	0.944980935941015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54091155405927	3.1001758166705
Merged-chr10-68465074-4	8.24993287056044	0	1.35621145650347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139068363-2	3.97120847301439	0	1.43459179873753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31576853-2	3.91259628663435	0	1.53745615547504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34557122-2	2.08569381753078	0	2.44734678496596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43499659-3	7.79275873884772	0	1.35801314705172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99393138-4	9.68572773676162	0	1.36935289909621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144198913-2	4.62359760548735	0	1.39945566583846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-123207577-2	3.7058215158369	0	1.38458170950403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100428515-4	11.8835544638848	0	1.34784678449128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89179585-2	4.01210038006502	0	1.43425244707576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48788865-4	12.7267365425347	0	1.35785364936669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21139405-4	9.55564938008317	0	1.34830395181363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40773337-4	8.5062481561631	0	1.35252618737064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86096870-2	4.2553611783298	0	1.53086469957295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118679021-7	20.4539249382367	0.907388365876188	0.408620752194216	2.22061253865273	0.0263772158166212	0.390313783589645	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70612360197456	4.5364993056265
Merged-chr13-81208210-2	5.10232360971054	0	1.41836740914549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94159430-4	20.5975534326901	0	1.34318840688378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54523914-4	8.62412471248731	1.24231233576394	1.32029298224331	0.940936862099445	0.346737215815831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr7-45340842-4	8.20020749756667	0	1.35150708773007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100839123-2	8.03921860411234	-0.0360977365903977	1.20916648492251	-0.0298534048375572	0.976183966822375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.724326877898254
Merged-chr2-52287607-3	7.13059441352818	0	1.35947567800297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125413536-2	11.0233573013605	-0.182232471263045	0.692526480587427	-0.263141520752345	0.792441502349956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88460372006992	2.86958498998643
Merged-chr12-85477453-2	8.36393115910082	0	1.43888943784186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34235612-3	8.52309684326969	0	1.37406046111072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31210026-4	9.3051402921594	0	1.3557483119473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116629167-4	10.1624978897593	0	1.372079091054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99270180-6	44.5136076718963	1.26473765428411	0.381991003508078	3.31090953103392	0.000929932679817976	0.0339491004313132	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38576809416749	5.69991275552455
Merged-chr9-58401914-4	7.51883919620527	0	1.35054372236459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117993989-4	18.0969673249186	0.14552983592816	0.72918850743337	0.199577797023163	0.8418107938324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98740100716091	2.23942951972458
Merged-chr10-95357221-2	4.6117038170179	0	1.41167618116337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50981211-2	4.58682373551905	0	1.38087212703446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106318983-4	16.912562707507	0	1.34757145470194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82140151-3	5.82415225644417	0	1.45523298374266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41639854-4	9.84229578022163	0	1.37124119056902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129861547-4	15.0314911702187	4.80946424574334	0.945668232831721	5.08578387088442	3.66110784473423e-07	5.27889022100552e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	4.8405125318559
Merged-chr17-8856621-6	24.9817194573539	1.70210498457262	0.490194471686963	3.47230554990751	0.00051600867321441	0.0219138402087985	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50319514478136	4.50936194017319
Merged-chr3-133314711-4	9.19173284972429	0	1.3554364703502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41445848-6	19.6381485351809	-0.64422597735016	0.454924168376264	-1.41611728312778	0.156741168663222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98534642836596	3.35606699659993
Merged-chr17-43534960-3	11.8140810913049	0	1.34649795670727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75104594-4	11.7876217705304	0.72895685688194	0.858727860992089	0.848879942057284	0.395948100997789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.94282148685549
Merged-chr14-120407021-4	7.83817947918465	0	1.35138054601887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5846194-4	12.1035323676533	0	1.36264121283599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58536251-4	17.4159201521266	-2.18248890214708	1.17739502268982	-1.85365901850091	0.0637879582683011	0.69252039614671	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0
Merged-chr16-44793901-2	4.02905265870719	0	1.392667124973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128076391-8	33.1588588981447	-0.059328665806914	0.35097782812164	-0.169038215674274	0.865766582141999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60610925242826	4.53722492458961
Merged-chr11-89003373-3	14.9118375125004	0	1.34078776288463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134279159-1	5.25006501910528	2.50400709565784	1.08501195213814	2.30781521873874	0.0210094161037365	0.331400894478479	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.09564699470957
Merged-chr16-92423612-4	10.2659784004645	0	1.34744282102819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74908500-2	5.24189439282607	0	1.3603119761673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9826046-4	6.74919954698755	0	1.3711868757634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86603893-4	10.947886884238	0	1.35223501079977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91082191-7	18.6615023526777	0	1.33990731122156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95591291-4	8.59573466055858	0	1.36082666517967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120049592-8	41.09924803101	0.131034410082319	0.382749893339212	0.342349958452347	0.73208754297537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87830690473738	4.21796052306273
Merged-chr2-157688587-10	48.4198613901192	0.0137268519889696	0.367556139234351	0.0373462731912565	0.970208910535908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44028262435412	4.45624172153195
Merged-chr18-53899354-5	21.7336665429567	-0.74235405415643	0.368881743593275	-2.01244454909902	0.0441730964088695	0.54289065061943	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40711512261102	3.78488837043651
Merged-chr16-85152571-11	72.6879753773022	-0.643618046143891	0.259178422735406	-2.48330103776022	0.0130171029215851	0.242078924979284	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12368807238251	5.35995133888419
Merged-chr13-60722893-2	8.86363693752057	1.40121816225289	1.00761637958145	1.39062662204334	0.164338679158752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.98728899046489
Merged-chr4-16071459-4	13.2631533386433	0	1.36435517060634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41364173-8	38.5305332483546	0.015060596037866	0.246355911790357	0.0611334874345625	0.951252899900283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80718739579382	5.84019309497058
Merged-chr5-90339820-7	29.6860259041091	-0.885965801607829	0.405740612747726	-2.18357683153273	0.0289933575567208	0.415226601083427	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35142890542652	3.57559700389474
Merged-chr13-110545505-7	33.395150345052	-0.491327447601557	0.504462404975908	-0.97396246530011	0.330075176334121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25602575077936	3.50306538341206
Merged-chr6-55016313-4	8.981050389211	0	1.3498002373242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75222090-4	8.05350904759006	0	1.34626832526305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83082963-4	8.80173880870124	0	1.36550211470653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85124783-8	46.5476469034283	0.359982005622578	0.341799233805886	1.05319722813369	0.292250608608478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69375487577502	5.12230015537226
Merged-chr2-102163303-1	4.45292626311777	3.74081756922167	1.07912593405288	3.46652550103421	0.000527231719677807	0.0223207079828395	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	3.90690141465756
Merged-chr7-145308458-4	14.0269388344985	0	1.34754956772213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49633973-1	4.03591290188953	0	1.45405961888687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19019276-2	4.05506016154614	0	1.39658342280257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139017576-3	6.85952763161382	0	1.35204684499446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42244734-4	7.2925659947959	0	1.3673611018042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36899833-1	2.15710073881409	0	1.67369726269899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-121452225-2	8.57175281083568	1.08560371278072	0.672472981118747	1.61434547299533	0.106452511872339	0.948948658223629	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	3.51791928607933
Merged-chr1-93575436-1	1.83481788388142	0	1.58233329870279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106794229-4	8.17686137624658	0	1.3674176276544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9087449-2	9.50537153795489	0	1.35783467393655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-123932313-3	7.31480234683655	0	1.37841894739441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90198104-4	7.60641435657844	0	1.35687258077291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122602478-4	15.5471493370269	2.72328985640248	0.742286589355562	3.66878493489527	0.000243705978579449	0.0122436352029577	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80725200154661	5.16405905826844
Merged-chr15-81511948-1	4.87797404537662	0	1.36414763368003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81542045-1	2.92408067812615	0	1.40184306202467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141526151-1	1.78696388986572	0	1.70244033978102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39412291-4	9.68060191255874	0	1.35666646609559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31315852-4	6.96047842585684	0	1.36801887391001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28547999-4	6.83294251220954	0	1.35935462474318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135773957-4	16.3931861527368	0	1.36543525661184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149831293-4	10.2750305199319	0	1.35826282667456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12949307-4	11.4766387347362	0	1.35627023075284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64234582-4	14.8752453074723	0	1.34614513350361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4777332-4	7.46435687068184	0	1.348421489906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109108595-4	11.0927266620603	0.073768836198679	0.612023855742207	0.120532615692274	0.904061244389271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23285743666231	2.29869433649221
Merged-chr6-120179855-8	36.3286843635231	0.0777813634594245	0.325201526867794	0.239178961453786	0.810966815611913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49278607930647	4.49337007253751
Merged-chr9-116077657-3	8.69203303982016	0	1.3482093042968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26696261-3	19.2896840535634	1.79206160562612	0.464370307721727	3.85912185991875	0.000113795187500807	0.00655274639550461	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2180769473006	4.92736980515123
Merged-chr2-129570460-6	23.9168600987341	2.22553324503524	0.543081562301126	4.09797238485743	4.16784989248577e-05	0.00284623306916626	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27624770054806	4.7217415220667
Merged-chr17-27074443-4	8.2534440882153	-2.55129507643991	1.1752803598358	-2.17079699757457	0.0299465210109342	0.42277785683188	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	0
Merged-chr2-103488980-8	26.4820938929414	-0.103710989959779	0.390880179259127	-0.265326807197932	0.790757715167034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60166672997688	4.38541215980125
Merged-chr4-133928898-8	30.3130923637854	-0.333721115751279	0.287133963736472	-1.16224883816797	0.245134401858035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77923020852127	5.43573526689545
Merged-chr3-68794552-2	4.27408297553461	0	1.403574537623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9907686-2	4.7482097584118	0	1.36989375871431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-42908886-4	19.1512852288434	0	1.36977379070383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64237826-4	12.3903983120768	-0.935637072466888	0.714984050581919	-1.30861250919567	0.190665641423716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32757362771984	1.75023420298089
Merged-chr9-106356720-8	35.362157980123	0.890217100581172	0.33364022187742	2.66819478650341	0.00762600315136687	0.166817668130846	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63236547145187	5.68401221763359
Merged-chr18-79578026-1	4.34841091257075	1.58607718025301	1.04642989195741	1.51570324246583	0.12959440739335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.48368994445501
Merged-chr12-3297807-4	16.6646243425647	0	1.35629773384433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36739925-5	25.6406566430324	-0.58711961477926	0.507181964969278	-1.15761138078879	0.247022662792289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49773980994036	2.67794105313194
Merged-chr2-119336174-4	10.655956941325	-0.0425025401877204	0.863064225590886	-0.0492460919216314	0.960723179761035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57612722179308	1.55412587431917
Merged-chr16-57347868-4	10.6199045673579	0	1.36249646944747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21549923-7	27.577843349178	0.0571060551224486	0.37433347559131	0.152553962832851	0.878750032263283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16240360665462	4.17752143671134
Merged-chr16-15986306-3	7.74440897326424	0	1.36243167047555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43260085-8	32.4870671130007	-2.47836351317212	0.384541408200575	-6.44498475409812	1.15612037716828e-10	4.08087971314873e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70105989855309	2.71313337449854
Merged-chr8-35466836-8	65.2066268988089	-1.78712643539175	0.250885903677171	-7.12326363975933	1.0540092984844e-12	6.58561970762227e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	7.1572461846072	5.39755583406414
Merged-chr4-45473344-6	18.8149306446079	-1.10953913202117	0.604532453577996	-1.83536735778904	0.066451276877337	0.709652270899207	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74246342764304	2.35031680267015
Merged-chr9-122138864-2	5.86834527305546	0	1.36465321300572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136795011-4	7.71258129388834	0	1.363806450361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106669511-2	6.62461583501631	-1.8699958981142	1.25797179493635	-1.48651655437857	0.137142541426009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr17-71301013-4	9.49314522497365	-0.357365137863709	0.594952573227067	-0.600661555130915	0.548065430131627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92690042314084	2.61238044918993
Merged-chr2-170155121-4	9.00185404330631	0	1.35642797200154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155094042-2	8.20730653231206	0	1.39445582699222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149820755-3	6.13706424092106	0	1.3817838524273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-6127254-4	9.01971332541484	0	1.35781188495065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115097159-4	13.8570181012048	0	1.37294335199069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160058334-4	7.22664949221326	0	1.36181147540194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3847594-4	12.5280394325414	0	1.36887291686079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9023346-3	9.7547508753626	0	1.34810063015278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149349386-4	21.2693069426966	0	1.34328481483444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32554807-5	16.7358446453142	0	1.34472702993263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51422439-3	5.6166709851357	0	1.35236849996318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29629550-3	9.38651055513533	0	1.41027655083508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111228486-2	4.26670986551649	0	1.40850760461041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130549314-2	4.02393236002866	0	1.40632578289827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122111901-2	3.18122075561759	2.53743257034955	1.45881813027927	1.73937553810343	0.0819687281447756	0.805593580405326	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.25298535761957
Merged-chr19-21467187-2	5.49126083346632	-0.0381633460889637	1.19153361551444	-0.0320287615825987	0.974449114233067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr17-83527861-4	13.0978162685396	0	1.35082629955918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45086426-4	15.4328244078191	-1.40868109724753	0.470959723847334	-2.99108612885158	0.00277987075271879	0.0799106262543844	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75840753085945	3.39471460411277
Merged-chr19-17359751-8	44.4931061287358	-0.779624107349698	0.260572277412527	-2.99196873547461	0.00277184648578128	0.0798488622790591	C57BL6J_F1_Control-BALBCJ_F1_Control	6.11203613252184	5.32120216709752
Merged-chr13-47216511-6	25.1923617200234	-1.55166729358329	0.697899949114252	-2.22333773709628	0.0261930346937634	0.388175347033338	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3009007084372	1.38572824442771
Merged-chr14-122060824-5	23.2184748311012	-0.201513488954456	0.49465187117906	-0.40738446712862	0.683725633467283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67266611792802	3.01278841724464
Merged-chr4-120993246-9	49.3813417011268	-0.0645634768826861	0.254958012002293	-0.253231802270663	0.800089092557746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69356174740769	5.64948180778523
Merged-chr8-57574619-4	8.04754648263201	0	1.35530813379121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56335049-7	33.5665509575274	-1.14953601053745	0.410139580566738	-2.80279218345375	0.0050662302738591	0.12444428895468	C57BL6J_F1_Control-BALBCJ_F1_Control	5.1777225876689	3.91234386223814
Merged-chr10-21918881-6	25.2013771124914	-0.969248011920917	0.778836367062536	-1.24448222105568	0.213322138757838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58115091314687	1.07599819202159
Merged-chr8-82370816-8	30.5377753664877	-0.185563388932922	0.302209445581065	-0.614022465698038	0.539200481755953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00619897360439	4.72318475175627
Merged-chr15-95826115-4	7.1791207403367	0	1.36181172552293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145320370-3	9.82931965756077	-2.35800464758198	0.616952191344028	-3.82202167471855	0.000132362052362043	0.00743292231854164	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6829496306989	1.67934182240563
Merged-chr18-55624335-3	6.42504533412049	0	1.36818599575006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156729859-6	17.392639992648	0	1.34332396445333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15234761-2	5.79280127459447	0	1.42879421450453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85029877-1	3.25408931236245	0	1.39994947641817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140110468-2	5.99525980308216	0	1.39642496961739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100440169-2	6.69023682992017	0	1.36680730317491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72737060-4	10.8941522519815	0	1.36595036663621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31181844-2	9.66450765193926	0	1.40387793613887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18694549-3	6.94453469246947	0	1.35126313364235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173409177-8	35.5446425728131	0.095707882842281	0.344316845783652	0.277964566689886	0.781039558941679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70694722134564	4.76008956852139
Merged-chr3-136166882-3	12.3433621459667	-0.399413832238116	1.0478643727039	-0.38116939810395	0.703077554904267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0.67591700901439
Merged-chr2-80025803-6	32.8058283275591	-0.030760131492828	0.35924751591663	-0.0856237834083355	0.931765491462316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36718674755452	4.3789607935653
Merged-chr6-136861212-4	16.2965364917681	-0.661787654910157	0.470128820137569	-1.40767301761357	0.159227915126289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27837676382767	4.08547406603208
Merged-chr9-61243578-4	12.8826753479213	0	1.41555243301564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-75254452-4	7.020998557037	0	1.34884598958601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98031308-4	14.0901015412838	0	1.34353878840246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65737786-4	15.6798665398928	0	1.34637253809847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42103752-2	5.43302837355936	0	1.39295608039982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67459977-8	35.9393006564437	-0.296393271720135	0.373529790666674	-0.793492993399894	0.427490649894286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41300906629226	4.06210695770945
Merged-chr2-120652054-2	10.6010883826967	0.968701998153188	0.701691210437209	1.38052462927334	0.167425171741179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60000191931229	3.64183219309899
Merged-chr17-49016376-5	18.1053633968636	-0.0356668226888627	0.741260984453827	-0.0481164170742679	0.961623462426401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.45526469271556
Merged-chr4-141857627-7	33.70736742723	0.408970274240631	0.275060064924025	1.48683988114957	0.13705710555244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57905350454905	6.05865973935949
Merged-chr4-129855298-9	41.632413863558	0.677795709747273	0.386466993206706	1.75382560907277	0.0794603935324179	0.790845740852221	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1311461189947	4.7692053465584
Merged-chr11-119126619-3	6.09328835569444	0	1.35908254517028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38939290-3	7.66174302256717	0	1.35872060638677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106612915-7	28.3645332638483	-1.61111864042699	0.456560825232093	-3.52881489472509	0.000417424996515654	0.0188932601045749	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5407617433947	3.07389803427425
Merged-chr6-17508710-3	8.50374325811474	-1.6849863428235	0.967567329175441	-1.7414667610361	0.0816017947165091	0.803149005792996	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	0.723581231604105
Merged-chr11-119431800-2	6.11984581142893	0.593572190567029	0.962486520097811	0.616707016849138	0.537427992135875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	2.17595034692625
Merged-chr18-67700546-4	9.15525041472881	-0.134647200257689	0.683247164654829	-0.197069533871702	0.843773124336247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	2.13836773113792
Merged-chr8-107269378-4	9.11848597507653	0	1.3667848836022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11037667-3	6.25559842528259	0	1.40520173928055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75656749-1	3.60939242754058	-1.19016509914431	1.18184573262242	-1.00703929987836	0.313915888851783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76659013712664	1.13743241080208
Merged-chr19-55862733-3	5.34301268639518	0	1.40362488246824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122558906-3	8.31488682798937	0	1.44133254601734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83200387-7	23.3249252467824	0.0137064331285072	0.391967868374821	0.0349682569271224	0.972105052688075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01313657713268	4.76303375806426
Merged-chr18-60807542-16	110.082640356898	0.231852317025353	0.195835376303033	1.18391437442124	0.236446959441231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.00808338922576	7.25416360061312
Merged-chr6-122653264-4	11.0654627048008	0	1.35272187782071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10228213-4	9.57695632545164	0	1.36126482038253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33562521-6	25.0751548245231	0.380194145842471	0.452282844002977	0.840611468870946	0.400565631548094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76021172301428	4.08043079678951
Merged-chr7-137420746-4	5.8248484018505	0	1.38374758502564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30786728-6	19.668315125543	0.294671965347003	0.443685184140128	0.664146507208899	0.506596546556146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6138908194988	3.82910930646481
Merged-chr1-152677283-3	6.94878989831788	0	1.36926494621371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34233174-3	5.02920248725196	0	1.3757315344842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142284838-2	4.21701727432644	0	1.38203050777156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-69667966-4	8.02564897108632	0	1.36822543928915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-117714375-8	24.8583500884504	0.804070214456726	0.409906134774328	1.96159595147168	0.0498095440004499	0.588290716836035	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77468028920909	5.45524355124035
Merged-chr16-36752170-2	5.67624849019173	0	1.36312929615433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83860892-4	12.7372443827042	0	1.3414406399658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143449749-3	6.24968678581142	0	1.36560603124332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61267588-4	7.72067031102142	0	1.37008940779509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45095763-5	17.9072491980517	-1.62660862120141	0.515438732303495	-3.15577491418252	0.00160072336625432	0.0520728434866659	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20464911707701	2.88198828288928
Merged-chr5-81058344-6	27.5021559864038	-0.563936200989474	0.379219509794832	-1.48709701485184	0.136989189850423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78866985132061	4.32211811600298
Merged-chr3-15128549-3	7.55779721719658	0	1.37784832128348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113422658-13	94.0014233056016	-2.34438618148192	0.271295697987565	-8.64144252515709	5.55076706996082e-18	1.0404625764e-14	C57BL6J_F1_Control-BALBCJ_F1_Control	7.64800576272345	5.29116692779469
Merged-chr1-92217429-4	9.57472873302505	0	1.35425210850491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24757989-4	6.63538455728497	0	1.34748080423089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116123029-3	7.66223499032279	0	1.36340225468093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63974821-2	4.87676385900157	0	1.38770247196065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117353341-4	19.082449583791	0	1.34965053816928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48825730-4	11.0112132087739	0	1.34738501169015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56953329-7	28.2660684417197	-0.89499543888833	0.374160084499531	-2.39201207174586	0.016756291239176	0.286568808432423	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90928822613204	4.13446331560918
Merged-chr1-86202812-4	8.88247375302182	0	1.34999094099766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76482315-7	31.4556147497991	-0.328146695149524	0.388134476392206	-0.845445883085982	0.397861935731956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57190870187054	4.27323732223041
Merged-chr17-67339797-3	8.27751462972497	0	1.35610531395654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153981035-3	6.32470274540111	0	1.35930802275862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106429292-4	13.3865979793035	0	1.35745758417127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134807242-2	6.6356625752929	0.107553718151122	1.04567709642927	0.102855574171406	0.918077597298983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	0.956353103033036
Merged-chr2-124298984-4	9.81607888251301	0	1.36080089170752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109249039-4	9.24205834629054	0	1.3644703917737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19415165-4	8.01011642386814	0	1.36389406456564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32912130-2	6.76419273373524	0.237348797524259	0.765654680264838	0.309994575416376	0.756565081498745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16022678139939	2.05996425538702
Merged-chr18-67500780-3	5.68446799479846	0	1.3909767438797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-58523062-3	8.708264559165	0	1.35842203380846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108404880-4	12.8713293643961	0	1.35191246470158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161361916-5	21.5607207067334	-1.04966705883413	0.802416663319569	-1.30813217972281	0.190828480398627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71427828315313	0.838451940269823
Merged-chr17-50388965-8	55.3937673632336	1.44389734366489	0.320055773186633	4.51139290283296	6.44032986715198e-06	0.000612834074971827	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05442259512325	6.51267347341263
Merged-chr9-77959941-6	31.226062316171	-0.265543897874631	0.411981082121052	-0.644553620053375	0.519216499119148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86754754342659	3.5824678183195
Merged-chr4-10977136-6	15.6653336517733	0.311157992367843	0.828358623390342	0.375631983034501	0.707190510155151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38601560292234	1.79957942362569
Merged-chr2-156415866-8	43.3347860042859	0.347504647588518	0.31924749622799	1.08851173993342	0.276369256693549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47426661202425	4.76001863630513
Merged-chr4-141500761-4	12.3251513240937	4.89837687900507	1.0418881749445	4.70144205184591	2.58330579428806e-06	0.000285999836398584	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.97377964373077
Merged-chr3-106448785-1	4.61057875349224	-0.593994943289174	1.41398724604669	-0.420085078525212	0.674423302787996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.303163067301871
Merged-chr17-44101019-4	36.7049743202815	0.397296251813954	0.564527625892176	0.703767598948004	0.481577514762006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92833609192973	2.8247467808866
Merged-chr10-19522410-1	3.44415024682072	0	1.43847717353888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45058400-5	43.7867851629489	-0.266506490878402	0.393679412726134	-0.676963240299791	0.498429277803455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11104849229871	3.87920103922364
Merged-chr11-21160121-1	3.56204857881225	-2.50846050298439	1.25879289941443	-1.99275075681733	0.0462887463967338	0.560153598704375	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr8-108781423-5	23.7904591144952	-1.12102937873991	0.928908248287688	-1.20682465766277	0.227499677909095	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0.724326877898254
Merged-chr10-121250345-1	7.34715957548213	-3.12508786310198	1.09147048021466	-2.86319045704963	0.00419398381990008	0.10873064478047	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21733612533801	0.55634759613363
Merged-chr6-118134936-1	1.87228882095224	0	1.48791329100817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40785933-1	3.41976472896844	1.32978611840202	1.08323714074168	1.22760388135467	0.219595704082272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.00425570563599
Merged-chr9-95700505-1	3.20205434903455	0	1.40972412886851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80668757-1	1.35234950217748	0	1.70471032799118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80163654-1	2.05122413705307	0	1.57468269123634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182935626-4	13.8952656557736	0	1.34513938305364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134558013-1	6.34007546338343	-0.860203672382423	0.995015725763461	-0.864512640463448	0.387306339469798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	1.08918047352118
Merged-chr12-4162968-1	1.74149358502434	0	1.46775203561517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54835178-5	32.6165681990955	-0.178977777370744	0.696498447355506	-0.256967948816389	0.797203515571386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40508790535098	1.97993309388876
Merged-chr6-134133917-7	26.8717656543135	1.00600801092352	0.395868124470385	2.54127056142603	0.0110450411631533	0.214816268269657	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8954709914413	4.83414530397643
Merged-chr2-160237940-4	9.60198444920156	0	1.35131483503806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121375434-8	52.1324091942358	-0.33082990819654	0.316625873693649	-1.04486062474046	0.296087390478027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78583997644541	4.36687834025191
Merged-chr16-57441233-4	8.97973246351251	0	1.38508195432598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15395527-2	5.57578361129433	0	1.38407625400579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-9132321-4	9.10197011876665	0	1.35104009296285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70392687-2	3.43244185609804	0	1.40780516038888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129625210-2	8.86390449483248	0.986473915179944	0.637230236801033	1.54806513911228	0.121606614231571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82286752253771	3.68574107037829
Merged-chr1-91096673-4	9.44606342632208	0	1.36620072688626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20169185-8	25.4517187017414	-0.0620256710037032	0.355105568011229	-0.174668258093159	0.861340310673568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86372403129565	4.81257998406621
Merged-chr13-41515943-4	5.77765701182857	0	1.37395271562145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71294893-5	13.8010222670143	1.17894609934895	0.642800923799606	1.83407654796166	0.0666426321110458	0.711295275657635	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85297260998396	3.21802184391882
Merged-chr10-80665170-3	7.67355261896116	0	1.435419008931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-24990228-4	12.6685103636675	0	1.37166623681354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161728776-8	49.8672591067525	0.668304329899144	0.385973620169574	1.73147669938047	0.0833667771847033	0.81450685852422	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51053721668964	5.13519312017309
Merged-chr4-151999651-4	9.04636303408659	0	1.34870847850246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58756782-4	9.03732619354579	0	1.36151976913076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114653885-3	7.05012408851135	0	1.34930653979273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75183054-3	6.89165788410177	0	1.37873743061724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17733216-4	9.5664423422592	0	1.34592015803554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92714027-4	11.7360720213002	0	1.34645230665011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23592771-2	4.65555696250468	0	1.36483668991791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5115118-8	22.9420651364916	-0.140517001128809	0.389412797946257	-0.360843305278842	0.718216587782616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7954811187282	4.59061711636208
Merged-chr6-128135849-4	10.782709051483	0	1.34567554898851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13372178-4	9.0763128694109	0	1.354530994629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5232726-8	30.3746993667911	-0.191639028040076	0.367565214787628	-0.521374222396973	0.602106105105613	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44213006452884	5.19789399113536
Merged-chr9-121301149-3	11.281980678957	3.13979384503919	1.06017634515992	2.96157696724082	0.00306067984861961	0.0863839542529146	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	2.47852493829199
Merged-chr11-88059237-5	9.44417915757547	2.77845367374276	1.05332586122423	2.637791186968	0.00834479483845538	0.177957906090073	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.50287224925689
Merged-chr10-94545741-4	17.5703487067676	0	1.36859042264281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98761933-3	7.67918332174006	0	1.34965115483641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100024098-1	2.59418401334318	0	1.42753076416051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31125652-6	21.7022833197238	0	1.34611915072607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65189811-3	3.72940440464699	0	1.43794839843445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68459671-3	9.21999049247	0	1.36001796404985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62281567-2	6.7423867668148	0	1.39229121400135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106840004-5	17.5373458643438	-0.0356082652827771	1.1015756719559	-0.0323248472068677	0.974212994350269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr15-59439586-7	26.4422500646784	-0.501563349914368	0.323698577068992	-1.54947653602897	0.121267207758819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96679962469145	4.53479733728144
Merged-chr7-128728897-4	8.20462177033811	0	1.35937338599503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92715001-2	5.42882431938155	0	1.36375740205282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32369961-2	4.55652244373901	0	1.38203695348124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112448281-4	12.9298650966162	0	1.34727318263297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-35764838-4	9.40482257083418	0	1.37510479366135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-100518707-4	9.6537973543209	0	1.35560636876926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141765261-4	14.8724754749422	-2.30177034634448	0.692786748628052	-3.32248033165004	0.000892209610887444	0.0327975140557021	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85036331906992	1.31037834433945
Merged-chr14-64876793-5	13.1647741808538	0	1.34368409993003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12471746-4	9.55974957781969	0	1.37979827080374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9031214-4	17.5894125202883	1.06101603310066	0.388955073387002	2.72786269082798	0.00637461366450922	0.145902157553287	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48298719537215	5.56850256391559
Merged-chr12-69977671-2	10.9256710391723	0.261925204723689	0.549242978115337	0.476884029764849	0.633444704763831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44520488778582	3.69411436816542
Merged-chr14-46912615-10	50.519834843835	-0.983063957764815	0.278951810102937	-3.52413543185847	0.000424867030176614	0.0191345044684097	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90083739943121	4.94459459170596
Merged-chr14-118910699-8	22.6164924708577	-0.0939428624571025	0.406196198887035	-0.231274597631645	0.817101479917316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15204568336412	4.03726851067287
Merged-chr1-138145774-4	6.55092574556287	0	1.35207390292437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148659226-2	10.8137007808443	-1.57731771830366	0.763152379960071	-2.06684504919737	0.0387487570300292	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37158207545174	1.35418021299255
Merged-chr4-149863730-6	29.8454947234232	0.809372967869642	0.453176091285736	1.78600103454998	0.0740990906283095	0.758798429897811	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2139218085534	4.45143221492842
Merged-chr14-27280399-1	7.04128883556647	1.48151893590871	0.987508018735736	1.5002601576901	0.133547025688754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	1.90217355684815
Merged-chr17-42909612-4	21.6714869402192	0	1.34529549445383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101596332-8	28.82319934297	1.03212578487976	0.35158551003026	2.93563231542427	0.00332868616175612	0.0925071835720351	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27814134979291	5.26761399732421
Merged-chr19-21461421-8	42.8487244411062	-0.434511560863989	0.329523912260701	-1.31860403660244	0.187301523511697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4778476356264	4.1510967723746
Merged-chr7-16951467-4	7.25657950738168	0	1.3529324488436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30977334-3	7.82926174529254	0	1.35929352546887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105981164-3	10.7758734701359	-1.73695199500885	0.503467758352454	-3.44997661954134	0.000560635106576357	0.0234247223354221	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72786025272506	3.13740203858764
Merged-chr1-134791209-3	7.29328234013843	0	1.35636279759784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61492312-3	6.72508333059623	0	1.36149180841293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122894986-4	7.7296553251485	0	1.36280376199736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76482817-8	31.016468990634	0.38226820453929	0.307601400279513	1.24273883081133	0.213964089810783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80769073535725	5.2504712454709
Merged-chr19-58214034-4	13.9672352431999	-2.51635851196574	0.671755200918397	-3.74594570838525	0.000179715458408633	0.00950306673505341	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6442842022343	2.00487246391424
Merged-chr7-25785020-4	6.84271329289131	0	1.36268124343959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27616351-4	10.4398057907048	0	1.36260403159677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83134493-2	4.62288218498154	0	1.41420759939259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92985010-5	13.1141943657493	0	1.35151673021208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-121330980-1	4.32934675618931	-5.32954941994129	1.10670069989912	-4.81570981244261	1.46677552681751e-06	0.000176009825303031	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05890426605077	0
Merged-chr5-150836968-3	7.95578282551745	0	1.36915908867949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27081518-7	14.3329434165735	0	1.35227818086831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11239734-1	4.3612967058378	0	1.39594479817964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39301705-3	3.92804750896671	0	1.43206563186067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45376026-3	10.3303541660317	-1.69509062075441	0.828221517623344	-2.04666334390662	0.0406911507102748	0.5135803910939	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4306872510886	1.15786140276852
Merged-chr7-83647425-4	20.6745784051137	0.0933924971547596	0.638313516297082	0.146311326284517	0.883675624995635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77167105195599	2.69568348923956
Merged-chr10-79824569-4	6.85939652469521	0	1.38046088870174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19161753-4	8.20941229014414	-0.697631853648601	1.35143795952007	-0.51621448749031	0.605704612866869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chrX-12088514-3	11.9882870656615	0	1.35727358308265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126663506-8	40.8127577588487	0.238991102030779	0.330944818002482	0.72214789001164	0.470203557332878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55344403127394	4.80320252966506
Merged-chr5-107923029-7	21.9869154448787	0.817297161361383	0.436348559119566	1.87303737867376	0.0610632235841538	0.674540596121685	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75090596943967	4.38306361680822
Merged-chr19-5944362-4	13.400220172596	0	1.36912823675384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72263128-4	11.1037299060325	0	1.34801370558397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157430122-3	4.92811990533178	0	1.36975284456591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123135866-6	19.6696136679588	0	1.34047608076816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123840467-4	20.1757389103454	0	1.37801546527486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79581637-3	10.9846734552979	-2.19015095027004	1.1854514391798	-1.84752481450052	0.0646711151286638	0.698529686108734	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0
Merged-chr15-59811732-4	6.35431528898858	0	1.35657835429617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143048376-3	8.17473583449612	0	1.36205784136913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26537972-10	50.9108192745357	-0.546734313108878	0.286043234187629	-1.91136949860611	0.0559571135477214	0.637688204473917	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40625718386902	4.83400503902008
Merged-chrX-143352940-6	22.8851451817184	-3.89687176289617	0.618734654185082	-6.29813076823479	3.01256321333963e-10	9.52092579732146e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38350870974092	0.788686275880602
Merged-chr1-170165094-4	8.98638831112537	0	1.34391189019606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139527599-2	4.93464856296453	-1.31184857125038	1.3514040356258	-0.970730097489236	0.331682700025731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.465515277017237
Merged-chr9-13518209-4	11.1018500850314	0	1.34456227507526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72601275-4	9.69678302468027	0	1.35953304445277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173955286-4	27.2150316457304	-3.98569342984119	1.05721552089705	-3.76999140767375	0.000163253167787364	0.00877772398393007	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46812004905329	0
Merged-chr4-99224485-2	4.96730357456557	0	1.3927154391701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108636377-4	7.54426059278355	0	1.35179220676173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125282686-8	33.6017350999937	0.0491372306434306	0.356527946359141	0.137821540065006	0.890381460303397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18192069450707	4.57794280022052
Merged-chr16-95825379-4	8.62938299690874	0	1.36383308395243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172528895-7	24.6208665966616	-0.665873163578425	0.397246664395344	-1.67622090569838	0.0936949307502619	0.873912618506089	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19728461706673	3.59857961915159
Merged-chr16-23493001-4	9.5528147643813	0	1.34703860724677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12997276-4	9.05092320687828	0	1.35249866520826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75791010-7	24.7450681928565	-0.869573727880192	0.506394789826616	-1.7171853766069	0.0859453065679281	0.827470938669147	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81207750071382	3.01086277553065
Merged-chr17-45746994-11	80.5028993167009	-0.0313009619441153	0.250918596292346	-0.124745484817102	0.90072504694541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61999911880146	5.58533416655907
Merged-chr13-119805850-3	12.2568928084409	0	1.35040403932735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11465004-1	6.63075891557399	0	1.34859181106918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99163283-1	2.7458146471079	0	1.42252591532274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105968196-1	3.27407659548461	2.94100432076396	1.28517422065762	2.28840905263339	0.0221137109553196	0.344281498629091	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.4068548238317
Merged-chr4-43473358-1	2.18600967174994	0	1.4700667421841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137657210-4	18.2498581792958	0	1.35374844056515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47893161-1	1.93424745865941	-1.87554913462245	1.45861670704463	-1.28584097903457	0.198498565338128	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	0
Merged-chr1-131436821-1	2.09169900808607	0	1.4726496472524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59460833-2	2.9284511586875	0	2.40622035842761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120029637-1	1.6286268124474	0	1.59685158872073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33756628-4	11.5157698604729	0	1.3418845487404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32184321-3	7.18536065272931	0	1.35337252654089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-94058509-2	5.65152673979888	0	1.41638426587572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67548825-1	4.10995971533857	1.1178157934381	1.17251594670008	0.953348051754921	0.340413752651125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.948471875794396
Merged-chr17-7399160-2	5.50244876921941	0	1.4355559504443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70282311-8	24.8727779518438	-0.928741820704227	0.412968791788663	-2.24893948204084	0.0245163466224002	0.369366437865629	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00764071220583	4.18564287866651
Merged-chr6-17520779-9	51.4008831696422	-2.49854425660001	0.523857671963373	-4.76950971670546	1.84674835778463e-06	0.000211423926609092	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71522774578276	2.29171792859976
Merged-chr11-26961768-6	17.0515029062786	-0.278041074828312	0.43612741987686	-0.637522572891236	0.523784511416209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49885743234506	2.96658611783813
Merged-chr8-84975259-18	100.266457084467	-0.0871463627132572	0.188219611136313	-0.463003627449554	0.643361766995408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64555903306178	6.59219976492109
Merged-chr12-71968764-5	18.4554742629587	0.728204264684244	0.878405433753976	0.82900701282342	0.407100438975562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.25243428981845
Merged-chr9-122230908-7	31.2400864401224	0.606099476697008	0.37951853887402	1.59702205456214	0.110260791170794	0.966720378589225	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95415695027709	4.56346578261715
Merged-chr1-40116628-4	6.89774567657174	0	1.34936442980845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17666803-4	7.00636155078222	-2.92172840270778	1.13358848261867	-2.57741539148174	0.0099542247422484	0.200553469406622	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	0
Merged-chr17-20949884-2	6.60495065580424	1.19174770975578	1.00194237560439	1.18943737561443	0.234267600528218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.81350735141944
Merged-chr9-90043025-8	51.5016132907473	0.577398351861397	0.313773248328026	1.8401771181518	0.0657422381972685	0.705507321403817	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58602896437844	5.31684433457383
Merged-chr6-89045768-2	6.01268876275401	0	1.39529026930612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-17946277-3	8.51014304038386	0	1.36878525137788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8706112-3	11.2459050644102	0	1.35667948911665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136635884-4	9.77989306409521	0	1.36293127478699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100944035-7	63.6439445811298	-0.700271394072247	0.413349513285639	-1.69413866852272	0.0902389359100992	0.853095359502101	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11265591430269	4.45201389824155
Merged-chr18-39446845-4	7.21930690638495	0	1.35677397863319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43626181-2	5.12098786360323	0	1.36999320547723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-75159276-2	6.21323876895857	0	1.43963158983932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20306669-2	4.99372381109968	0	1.41244416784958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38131276-1	5.49881798532252	-0.155051631918891	0.66681415929192	-0.232526004072166	0.816129492303832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12819815355747	2.60910034013527
Merged-chr5-21692491-4	6.64678357921618	0	1.35755485002408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139338097-4	10.035528080068	0	1.34316042198515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150058052-1	4.75476670102348	-0.360094794226308	0.9508338544153	-0.378714738178672	0.704899707729967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	1.60509799720614
Merged-chr4-137835923-12	72.9609265448702	0.102005616230267	0.215137256736735	0.474142032753965	0.635398626646163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.8827481918381	6.94566507883747
Merged-chr3-9347051-1	3.29263346591355	0	1.44664625387635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53399828-4	7.1294733219985	0	1.36042239925389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155049274-6	11.3770074999782	0	1.34178093325745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34364831-8	39.0237392365085	-0.0857241016609667	0.310298270018966	-0.276263550085945	0.782345649684626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8799654709506	5.72016736382679
Merged-chr10-22743737-7	25.4002319917855	-0.736645935129953	0.40999459321322	-1.79672109662885	0.0723799080418206	0.747577317356133	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60688506260479	3.6022603223149
Merged-chr1-165697733-4	14.7590041336527	0	1.35163750830666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113931079-4	10.4858045780115	0.24387659996557	0.793528518762917	0.30733186545805	0.758590783431129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	1.43852373395375
Merged-chr16-93091042-7	29.9719389626509	1.04105252110409	0.440113094907924	2.36542046385121	0.0180096112233355	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64219990754748	4.67238002915095
Merged-chr4-133660243-8	35.2762357985415	-0.110286445104245	0.328805242831995	-0.335415713430691	0.737311516210961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22095866636006	4.99520772398763
Merged-chr11-116005028-8	43.5030451882281	-0.155997373712154	0.362733337731484	-0.430060756719394	0.667151445677942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59581570591968	4.55076401947496
Merged-chr18-9505070-8	44.3711318372366	-0.200020463327486	0.543720685836738	-0.367873558129707	0.712967517349316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06135971379114	3.0863870456778
Merged-chr3-16152902-3	12.2183695086556	0.504838306673364	0.672681900488291	0.750485937419914	0.452962090196987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44814865060117	2.72267446608857
Merged-chr3-51553214-4	9.70809437832278	0	1.35893029017111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34336513-6	30.3928121865058	1.05106721930923	0.57880337775653	1.81593138482227	0.0693808982182405	0.728365439599331	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10822668382129	3.49482830137692
Merged-chr2-14204459-4	10.9356795856548	0	1.35557836364884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83636676-7	28.1098851551964	0.0960130720091345	0.458906321780129	0.209221506552129	0.834275324132435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4338626578496	4.56694452864783
Merged-chr18-11718313-4	11.0046379951354	0	1.36017892347375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49642953-4	12.0628822437547	0	1.34811472448507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21999739-3	11.0353161358662	0	1.35894102628578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118662201-3	7.22792285926849	0	1.37004862292714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90558252-4	10.0641726755644	0.653385620976793	0.844755185773948	0.773461509298903	0.439249299778591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7464719987851	2.88800704321688
Merged-chr8-27264345-4	8.22039751613012	0	1.36517677944745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140739982-4	15.7753860102129	0	1.36398791414188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98082605-8	38.1865429868021	-0.546099057840534	0.331283305565648	-1.64843518724283	0.0992634003856941	0.906931141644847	C57BL6J_F1_Control-BALBCJ_F1_Control	4.845850138426	4.27317855168785
Merged-chr16-21319053-3	8.11253245818265	0	1.35548579364223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95977312-5	26.8898917215599	-2.49942574486375	0.764269416030821	-3.27034641506962	0.00107415853681328	0.0379603806632518	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86015311524694	0.765562747387088
Merged-chr9-44513326-7	29.2434806729697	0.262246480032308	0.418849588452825	0.626111347037517	0.53124191006654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00151856507132	4.23852969076932
Merged-chr15-34067345-6	24.1247783946775	0.871226192913942	0.734174099126621	1.18667519591111	0.235355762517675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.737158151675
Merged-chr18-65328782-4	24.2877561835546	0	1.37341697303784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61321473-3	7.22321274638104	0	1.35253481003767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128442336-3	7.29141679720773	0.666845467032242	0.96208920925709	0.693122280778067	0.488232816221447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11812572528152	1.38647389072186
Merged-chr5-136642362-3	4.50484839421215	0	1.38359457593897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157016847-7	24.8602631962226	-0.889475073747209	0.504949735035466	-1.76151211107128	0.0781517649784215	0.782799298408331	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23278781342895	3.65317822343966
Merged-chr11-8405734-2	8.71650895792888	2.02520825721537	0.993795573409411	2.03785196010433	0.0415647401570152	0.521203624035799	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.10751609739453
Merged-chr4-130921500-4	13.0019963372859	0	1.36176670462483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-65154514-4	12.9888194592621	0	1.36196915219522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44551377-6	19.4722123065029	0.421840840750659	0.560549635220562	0.752548595602379	0.451721217400585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53717379407785	3.64173807200044
Merged-chr1-127128062-1	7.84660136765346	0.58977084806722	0.807711132933224	0.730175460037862	0.465282940676834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92027594280124	2.81058647244946
Merged-chr4-132491961-4	12.1817572213345	0	1.35385634079258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133390719-1	3.3891065295175	0	1.38150931732992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117181850-4	13.585021294894	0	1.35489628565421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35817133-1	4.90630841284062	2.8315625732673	1.52454510594699	1.85731636422029	0.0632661575900848	0.689333545888839	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32190966491666	4.63913946911464
Merged-chr13-42976356-8	32.2819774650239	-1.81800317720251	0.384790884734537	-4.72465240037255	2.3050929458205e-06	0.000257824171691062	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90752230026609	4.05904067872403
Merged-chr19-44360393-7	27.7830976633189	-0.53549982551389	0.477831542315079	-1.12068747684468	0.262420914656015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80305753052925	2.63928801137446
Merged-chr18-46450882-4	10.2178370430534	0	1.34404102094637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8864682-4	8.82134446328942	0	1.36360629654075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12435129-11	128.515301781419	-0.00169754015135879	0.256854006202444	-0.00660896894876868	0.994726844100211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98447369909832	5.96387946211788
Merged-chr8-13551207-3	8.50316697954415	0	1.34952646890637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3768755-7	32.6608395187438	1.29058274773961	0.473893533469704	2.72336011485609	0.00646215755458882	0.147471210121702	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30457403055127	4.60155268452878
Merged-chr17-29380671-13	66.16105886594	0.367848295718472	0.207761662144712	1.77053019272754	0.0766388592768283	0.773920072715792	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18503794355285	6.53801398169726
Merged-chr13-47233331-8	26.0309401397335	-0.192724252448505	0.442230609602554	-0.435800345484253	0.662981593171707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43799788569231	4.25003897787668
Merged-chr19-4333970-5	40.2479484431657	-1.66431887069486	0.529205192875561	-3.14494055066125	0.00166120583472796	0.0536550730659402	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03706416164134	2.06541838463802
Merged-chr17-24285895-5	26.4530474522956	-3.29750596359605	0.513186077368538	-6.42555616571802	1.31388240666482e-10	4.57829062460853e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48740123877352	2.0560328530563
Merged-chr18-46859698-3	11.3553331971358	-2.60434909470525	1.09597412986952	-2.37628701602227	0.0174878539966704	0.294310295791024	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36809407398891	0.465515277017237
Merged-chr12-70968720-5	25.6240183096809	0	1.34074550134019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118857306-5	19.9731355881902	-0.241213353329214	0.532391599493358	-0.453075055201398	0.650494696845502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08964381311261	3.47255294118548
Merged-chr5-123136965-4	8.21123084136694	0	1.35574274520438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12490608-2	3.36755002238311	0	1.38598796803006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38360242-4	5.21742418918137	0	1.36646537568574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74250327-2	4.95729692138933	0	1.40886223242507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-105064447-4	10.7096868206251	0	1.34951012338253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189875833-3	10.0359031937052	-4.21104621086831	1.01816923547858	-4.13590006860593	3.53566041349597e-05	0.00247673923218077	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6750269376997	0.303163067301871
Merged-chr5-74820560-3	14.4043215278585	-3.09115965782895	1.01946850946671	-3.03212863283629	0.00242835697446233	0.0722908306543253	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00317800184932	0.465515277017237
Merged-chr3-59205708-4	9.67851780075222	0	1.36505622173317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70877532-4	7.42998251062732	0	1.37410444583478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88625112-4	16.0115525947734	-0.880173956098516	0.700643981229435	-1.25623566273139	0.209030540341793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19839874100768	1.61354141164132
Merged-chr3-14833013-3	12.3830280687044	0	1.40032258476876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92652692-2	6.45353141389585	0	1.37689670948233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86894647-8	27.3529226582049	0.0642128262637137	0.377670001863402	0.170023634249189	0.864991549814909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13207568686867	4.32515787146767
Merged-chr2-70704563-3	5.34948760021971	0	1.36019931542935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119375537-7	31.6623590407627	0.86497041455277	0.4184180011569	2.06723996616107	0.0387115479868235	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57735646637125	4.5282869705647
Merged-chr7-67463836-9	54.993223924782	0.0577985002406976	0.305631780938643	0.189111551368085	0.850005388161276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.02455616662901	6.06041662169782
Merged-chr2-145588198-2	4.16512215800868	0	1.40549616488201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144245957-1	3.94323071618936	0	1.39832840058133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80317209-4	8.58114633511675	0	1.3516313140689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125388805-6	20.6163906177806	0	1.34369170970872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56370552-3	7.74503152888853	-0.341685874025753	1.03664218103165	-0.329608306779214	0.741695945167525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.97908007631626
Merged-chr12-102455931-13	76.6569335068449	0.234728977878744	0.229961907457008	1.02072982640669	0.307382459256984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.70895668995258	6.9425486504812
Merged-chr10-19078076-14	114.732499225157	-0.47767063574132	0.284130326437792	-1.6811673774144	0.0927304081085894	0.866999011760374	C57BL6J_F1_Control-BALBCJ_F1_Control	6.82327494905552	6.30702066769693
Merged-chr17-43327979-8	29.0396851801678	0.379257948044533	0.348380242945496	1.08863219348483	0.276316114118487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38043860018692	4.77270692030492
Merged-chr17-6001591-4	7.19363460396073	0	1.35172043325554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115532107-4	13.7578591630881	0	1.35728036328515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-141014417-3	7.4558937762699	0	1.36210044828589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134063924-3	8.37616575845895	0	1.35397512216202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19302665-2	5.45462357655014	0	1.8604780552762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122122245-4	6.70073263324821	0	1.36030218421423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100931757-4	7.92217878258952	0	1.35926763567869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59865245-4	8.18082074985945	0	1.36067168184037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135951846-4	18.155171768958	0.208437489519201	0.487194691966033	0.427832020661122	0.668773422411107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49985909124589	3.19625894596182
Merged-chr7-101465954-2	5.61640579386174	-2.55098696060842	1.17971206146874	-2.1623810113736	0.0305888199853632	0.428550944738237	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2481338739303	0
Merged-chr2-24970535-1	2.82660901919734	0	1.43885445699308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4120904-1	3.86651389828636	1.38362685085605	1.22539848996662	1.1291240051175	0.25884552611402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	1.54998568242928
Merged-chr2-60809056-2	4.36068115160818	0	1.40121312463516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113764186-1	1.66809479203809	0	1.5388331807543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79017483-6	37.0857820085851	0.582414893916843	0.402857178190451	1.44571060278218	0.148258389216557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06266414917812	4.62610785728338
Merged-chr16-20159149-1	2.0828581647886	0	1.48004393539494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-94657908-1	1.47349074286843	0	1.65899678752754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130689256-2	3.23568545783254	0	1.58298725639295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135666431-1	2.24713709488391	0	1.43121980224705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-53115-1	2.27718286030111	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61934800-1	3.58723163687014	0	1.40894608161009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27328408-1	1.87825646333996	0	1.48514669126101	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64186013-5	39.2642403220218	0.047297272226078	0.495655240667537	0.0954237307415111	0.923978267675256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98076525694038	3.21621850489687
Merged-chr7-45456397-7	42.7776250077704	0	1.35713733971996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55754592-2	4.65659979164854	0	1.41924005516925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170361457-1	2.8348927287303	0	1.45616582608402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-36931809-2	4.66012445203733	0	1.37823236955471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10694515-1	1.88088060125836	0	1.43734348926355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106770529-1	3.02761343767476	0	1.40204541251538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121093136-1	2.88415211884748	0	1.44259143795211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-28365604-5	34.1904717073556	-2.20806488047057	0.344741640853468	-6.404984541479	1.50384616986814e-10	5.2068518438129e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.94210236660126	3.62552058037224
Merged-chr15-31338998-3	8.4441052440439	0	1.39102803183997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29513372-7	24.4808329069991	0.629792985994677	0.379431412454503	1.65983354388244	0.0969479435928915	0.893151354043174	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28767874404817	5.07814297272611
Merged-chr3-87334834-8	47.3514131015719	-1.58313813331928	0.310736129754113	-5.09479903277427	3.49111387964474e-07	5.08776030519058e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70766826167364	4.16292124241545
Merged-chr2-4617095-4	10.113689913675	0	1.36660527049311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115505125-4	11.4944487019236	0	1.36629697404095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63492844-4	10.3883948250072	0	1.34983763453045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59741701-4	8.29225738342338	0	1.36510577547312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35665668-4	10.1516211256084	0	1.3638948019598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84274103-4	10.5184085121971	0	1.34959247575843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8839449-4	8.80003775747045	0	1.35402722715902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41154208-2	4.32637077828029	0	1.44122817973031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122038756-3	6.37210427469941	0	1.35862029606019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20500714-4	5.71564246494198	0	1.35888099680823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7858538-3	5.16570117271873	0	1.38169322260487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113580511-3	5.55669118677013	0	1.400258382602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128467654-6	19.997057479834	1.24967721624897	0.776347571676054	1.6096878020125	0.107466029223352	0.953598740214201	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	2.74322452051939
Merged-chr4-139169964-6	21.6432084553406	-0.33492124383779	0.418496688500484	-0.800296043053163	0.423539295135384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43854630751561	5.0490378398376
Merged-chr12-5294218-4	9.54846236863107	-0.0372505518868012	1.02993248841853	-0.0361679549928558	0.971148437474798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	1.13743241080208
Merged-chr9-10566021-4	8.63694946520439	0	1.36334962158627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70150898-4	9.80289553433466	0	1.36070816076982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117146219-4	5.50727925594188	0	1.39429172607946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117330075-3	7.35006492547676	0	1.46868846247609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-160116259-5	21.6738488591857	-5.70865956783434	0.999879103170044	-5.70934981012749	1.13408584079491e-08	2.57940469538788e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49332944335254	0
Merged-chr1-138153304-2	4.15124884405824	0	1.38712242612915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32698731-5	19.5743943647467	-0.266110094826665	0.52606509924841	-0.505850122364811	0.612961869072668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60280255630439	2.79777575068809
Merged-chr14-72564155-4	7.87409381332298	0	1.37513454451362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29393782-4	14.5938620026666	0	1.41681912975988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68206915-8	35.8519128623555	0.0887935802179842	0.338129395064302	0.262602369134746	0.792857073829444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87685748399382	5.1350530378929
Merged-chr14-33319699-3	6.51633070822485	0	1.34912589692922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54961533-3	8.79107063892725	0	1.36259246532265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64088636-5	28.5255965549379	-0.277763016118552	0.603902125590837	-0.459947074779375	0.645554209658777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25049756766703	2.58132405424117
Merged-chr4-134759752-4	9.25268001407786	0	1.34923039145222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35844140-4	23.4927680961748	0	1.36358317506403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135937583-8	40.3608306119122	0.715527070312473	0.297256649643997	2.40710198129936	0.0160796789739311	0.278782645594067	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92339089926145	5.68523153778873
Merged-chr11-43362031-7	22.7330884352672	0.725574870720272	0.441428522633144	1.64369729983052	0.100238743995265	0.912709863457056	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65559239930071	4.34147311513133
Merged-chr7-101466400-3	12.0780109876452	-0.758349221718205	0.783531444612173	-0.967860609721372	0.333113989003172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	1.25163494309627
Merged-chr3-152406173-4	8.49506944005392	1.23263903303151	1.3188219961129	0.934651557726964	0.349967899326735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr9-40651579-12	59.2817140314908	0.251422062194018	0.272890292712737	0.921330178859394	0.356878069560317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40502401225396	5.66146695518773
Merged-chr16-22545921-2	3.81903968850906	0	1.40404988277031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105861966-9	29.0920051979862	0.394207024496147	0.337757439675055	1.16713054455706	0.243157654409157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23456716417502	4.73188196526307
Merged-chr8-35209086-1	4.85224001790146	-0.56477316425458	1.05138980565657	-0.537168195103331	0.591151438363316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	1.02674429890598
Merged-chr10-67640867-3	5.10022710382011	0	1.39486743394868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7235027-4	11.0546341368875	0	1.34714879877766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21013295-3	8.09327279429498	0	1.48718866483193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53492206-4	8.49945217622963	0	1.35120660591187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116681176-4	7.92337603428052	0	1.35532180987608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61443603-4	9.8729144685129	0	1.39048033253358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13454746-4	11.44013195152	0	1.36009349656829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27237431-4	7.1756857864082	0	1.35644484427042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73927218-4	8.09578357366856	0	1.36256598477404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146517078-4	9.59780456415709	-0.693780162805718	1.03068850120527	-0.673123026010693	0.500869026074979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.724326877898254
Merged-chr5-97025078-4	13.8282129051346	0.399462917790593	0.853516023342647	0.468020408364644	0.639769995323958	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52765326036496	1.39284430389808
Merged-chr11-117775758-3	8.54489384850455	0	1.37968997054934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62189265-12	75.8153822493738	-0.390920562124049	0.294361976971999	-1.32802669062532	0.184169289653417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42688439551096	5.01138369049804
Merged-chr7-35157703-1	4.77490981344076	0	1.36715742849326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20958485-1	5.1778566861373	-3.46225907296541	1.13001388873254	-3.06390842403608	0.00218465772709525	0.0667167468467251	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	0
Merged-chrX-135738924-3	9.06267912521391	0	1.35530459317215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64018686-2	3.96770585651562	0	1.49719669576797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149461829-4	8.07173854457274	0	1.36401574963605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133012504-1	2.99747705501185	0.282285928449985	1.08263040213603	0.260740810430812	0.794292392151828	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.11816745933907
Merged-chr9-103347271-4	7.81451947375463	0	1.34918388079557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100824627-1	2.84807162394554	0	1.58333341607259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127266569-2	7.83352910808869	0	1.358397436622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28523209-4	11.4579881757166	0	1.36962450298768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63034770-2	3.36637512084586	0	1.50281931475989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100878798-2	4.77067030429163	0	1.40008330416701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85430230-4	9.69588612195059	0	1.3661820269551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19187298-4	7.48848184605907	0	1.3610579770332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59583736-7	34.2155472527137	0.493272407490396	0.38994991002813	1.26496351147975	0.205884408295325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70580960282214	4.2003614921725
Merged-chrX-57306931-4	7.36698696927019	0	1.34923478827777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-30597166-8	20.8224976067606	-0.00481671512472391	0.405496810641328	-0.0118785524283307	0.990522509292274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62792012607427	4.43283891574332
Merged-chr8-46769493-3	6.99444585764951	0	1.35835335398174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40710178-3	17.5286988051058	-2.32417690497484	0.52848163710209	-4.39783852797493	1.09334270011729e-05	0.000948251948796341	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48301909697874	2.59753599128973
Merged-chr6-51173151-4	16.1747456996063	0	1.34583073901349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127609787-5	19.1909193709225	-0.457463668983092	0.783535126581236	-0.583845769594431	0.559324081664272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58180101474665	1.59184561974686
Merged-chr13-36700058-2	8.40238465398592	-0.360647272406472	0.659915629258515	-0.546505123407514	0.584718766894202	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01714140010888	2.49075998119831
Merged-chr2-129385583-3	12.5370488693959	-4.45390504205842	1.01428319740609	-4.39118488154863	1.12734629897715e-05	0.000969940750940762	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68121240558349	0.376242425970964
Merged-chr11-103409250-3	5.99511181020431	0	1.40271849958818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139579355-12	84.9680514904288	0.721299380019736	0.218093545788103	3.30729356255477	0.00094202115517774	0.0342248906673474	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12196894965109	6.87141663798892
Merged-chr2-132007640-3	5.46797041268065	0	1.39511266541389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11332050-3	4.83674303878485	0	1.36262092880256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22376612-6	28.4534576839038	-2.02869787236792	0.458697810732872	-4.42273284262382	9.74602249965458e-06	0.000867076983729499	C57BL6J_F1_Control-BALBCJ_F1_Control	5.1435587808855	2.02162858657587
Merged-chr12-67059352-1	3.9619865645985	0	1.42165527358128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-93013473-4	7.19793405252626	0	1.41920640648615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130034193-1	3.35716120128002	-1.03195421547095	1.1625016023202	-0.887701327388546	0.374701431707629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61425725761568	0.788686275880602
Merged-chr1-144313575-4	8.92239562958107	0	1.36648045421108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20117462-5	37.7983661851199	0.576388760970682	0.364742129288665	1.58026373891818	0.114046480314473	0.986305211236326	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05840701686442	4.50596332040384
Merged-chr18-39483761-4	16.6800431277167	0.738750654581528	0.888795717905327	0.831181608663216	0.405871042805477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.74544410475497
Merged-chr4-120053463-8	27.5507940071452	0	1.33765179207802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83563988-3	11.2396147615873	0	1.35422451891562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118376661-4	9.34933168109105	0	1.37138673278353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102827968-4	8.23202507925807	1.80206823762958	1.30018981689418	1.38600396204783	0.165745693673325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr15-100665162-4	10.223061908579	0	1.36103868550211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141549647-2	6.37277257261633	0	1.37585494115785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70745495-4	11.7015569781651	-1.36987954589802	0.974993710317683	-1.40501372614155	0.160017196673727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21565186750098	0.815004392037195
Merged-chr19-44416404-6	17.3582620764285	1.29504197830083	0.815234603085991	1.58855128744361	0.11216173331049	0.975676053932615	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.53978940447978
Merged-chr15-5432197-4	11.5238104905734	0	1.3678996530677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106663872-3	7.63742776654697	0	1.37233606325602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-94768811-6	42.3159327102721	-2.35189262749272	0.454052518134368	-5.17978104637825	2.22146489727444e-07	3.43058552133355e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4263894541115	3.08017822154978
Merged-chr13-92919990-2	6.67532774367006	-2.22172980167721	1.36140605375554	-1.63193765412487	0.102692620724869	0.927225617146595	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0
Merged-chr2-3519506-4	8.56257979300253	0	1.34562842967535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125426641-5	28.2053524086767	0	1.33490362284925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129811052-5	42.3941517032018	-0.565625197863849	0.44224195283007	-1.27899489011435	0.200898855318875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29777616207893	3.56723732863691
Merged-chr1-171762111-5	70.1919509655447	-2.99988951172552	0.88261382517134	-3.39886984111443	0.000676649095638872	0.0269070725602293	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75090596943967	0.723581231604105
Merged-chr3-108401895-3	7.73441810700543	0	1.34994548667989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-14893887-6	20.5717958369583	-1.45796533039461	0.909595697609981	-1.60287184100091	0.108962951736894	0.960609324272758	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	0.723581231604105
Merged-chr1-147010819-4	9.93769635958102	0	1.37908446895585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7964659-2	4.97219791539643	0	1.37756230446585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116269701-3	10.1119580175373	0.696437677927456	0.973337698551125	0.715514953303615	0.474290904329715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.4771514048608
Merged-chr10-51433178-2	5.19376784329953	0	1.40406883837966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164917028-8	31.5450388467874	0.510329582297612	0.366732082415265	1.39155968830604	0.16405577312182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90585602189587	4.59741037712627
Merged-chr19-34248737-8	35.5166794344342	0.0148273717048346	0.345081991236426	0.0429676774835691	0.96572729967825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65722431821391	4.68280210465282
Merged-chr13-112427660-4	9.17385247078464	0	1.3569005475496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4189810-4	7.86776918669384	0	1.35569341050679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122052026-4	9.22229783514606	0	1.35724213411734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-63511095-4	10.0004355821684	0	1.34276940640035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104979304-4	15.8041484897327	0	1.35068385631679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65565002-6	42.5112413334627	-0.496835189354979	0.425498490385468	-1.16765441142902	0.242946192762248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78997997655858	2.71315429111818
Merged-chr10-121516421-3	6.69792739482442	0	1.35359452680085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11516271-7	23.2568934906519	0	1.34554179897094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167339565-4	11.111874274799	0	1.3611853156733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78321060-8	30.9369474724835	-0.155025863052926	0.301794286719682	-0.513680576057162	0.607475334384163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01222067710745	4.83077349489021
Merged-chr9-22343012-5	13.5092844557697	0	1.34315866328509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86903813-5	13.3893286402526	0.107530956155693	0.674539832153333	0.159413797421602	0.87334286914498	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51813555892491	2.17954990019872
Merged-chr16-43108023-3	6.6470126131424	0	1.3524003721226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122800455-8	25.1680547952134	-0.569548875558986	0.425613373645185	-1.33818369164733	0.180836563991538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3122687233092	3.87273521154391
Merged-chr15-6402950-4	6.87225044801574	0	1.35569429291917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117390411-7	38.6480729322653	0.703277209770191	0.409397021759566	1.7178366533971	0.0858264138724936	0.82697044642092	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93609199289421	4.66549487347586
Merged-chr8-46899294-1	2.12310685526812	0	1.41604399270599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85770388-2	3.08555691311751	0	1.4098085062573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34314601-1	2.6633774539004	0	1.4174038803746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106394851-1	2.39852051337801	0	1.51104462424337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139741978-3	21.0708317973809	4.09453558071232	0.527044287076255	7.76886436513049	7.91929116326619e-15	8.44087741850954e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69736543272236	6.36013637787463
Merged-chr7-47067555-1	3.10377664378412	0	1.41758804372701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5791109-1	2.6837184947661	0	1.52448539970443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-113027497-1	1.5726765464973	0	1.5673231871562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71007980-3	7.17131553585399	0	1.37769508846769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26744563-5	20.0733716665695	-1.99921451384087	1.12386361143198	-1.77887645218227	0.075260019486249	0.764969969942597	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.41385117919798
Merged-chr11-99177291-3	4.90719068200433	0	1.39699186450154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47647704-1	4.74940435238885	0.720769267380217	0.95424213492951	0.755331630198304	0.450050024681108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27256041875316	1.66624882212637
Merged-chr11-96404507-1	2.46679652539785	0	1.45713350328741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47351596-4	24.6726864443312	-2.71419679058337	0.399574659534263	-6.79271501788172	1.10042626103893e-11	5.06932806134025e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24501211507006	3.46494681590549
Merged-chr2-150895101-1	2.66850952658396	0	1.43584736390771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101600027-3	6.24446400300786	0	1.35829766725538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32555770-3	14.3377376804514	0	1.39285500858605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55453198-2	3.54512862801476	0	1.38643106660742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-157496689-1	3.13169000405381	0	1.40562152697941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38610336-1	2.78363352533246	0	1.43096402728346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-81673942-1	2.26010166278366	0	1.44260939484563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-15948399-3	5.45280946032671	0	1.39525827006119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25782243-3	5.46617177198141	0	1.40397706179818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8353715-4	7.85626236593325	0	1.34786131344504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_GL456239-36269-1	1.08313764724896	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167371686-2	2.82516822628333	0	2.08980441674997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92374777-6	61.0871313049448	0.428886636754726	0.373743456801606	1.14754286382703	0.25115732835747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16109431507429	4.63036758459179
Merged-chr1-64797407-4	8.79239559173617	0	1.34454563102846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58735279-4	8.00373516440821	0	1.35719265108274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18655042-4	10.8044017929055	0	1.35345699275437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43571171-4	8.44852394148638	0	1.36188279592098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114697118-6	28.0404129745052	-0.944216352328286	0.322095032649613	-2.9314837442881	0.00337347020926633	0.0931801153991406	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67580560837866	4.72723257369335
Merged-chr19-17244385-3	9.77051198872663	-5.86568479216454	1.06573686546803	-5.50387715976078	3.71528466538087e-08	7.18715868773802e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26376277316336	0.303163067301871
Merged-chr7-90138533-4	10.4659776126137	0	1.34872742779501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115491927-6	32.447725205732	-0.643632350245406	0.515487459554987	-1.24858973446424	0.211815168926968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93672497792174	3.23089190052716
Merged-chr11-69785009-8	27.3774809056184	-0.432676580570599	0.352617895803099	-1.22704090098764	0.219807218525064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99198944506618	4.53737946582896
Merged-chr16-55754028-3	10.4203358026102	0	1.35094697826942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121366425-4	10.0025008999663	0	1.36323747717649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61665135-6	18.0620245696699	0.603432550047508	0.608978286135854	0.990893376308152	0.321737647026505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49065419848114	2.74045213443586
Merged-chr15-41784363-3	7.87441853666822	0	1.36661499405782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166729788-4	8.88328964251581	0	1.35483163722652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82940096-7	43.5565100136522	0.0920662336602524	0.297854579207696	0.309097929281973	0.757247034308215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23244948160186	5.28615591028529
Merged-chr10-127636786-8	35.2588378190771	-0.235635412117624	0.332505027765663	-0.70866721535318	0.478531014275863	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94637597583905	4.57440668113637
Merged-chr17-71195253-4	7.79935486447947	-0.952903946898925	1.00323595997048	-0.949830333959488	0.342198469953071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.67591700901439
Merged-chr2-72196596-7	31.5094808837876	1.39373212253682	0.334091242469885	4.17171103388756	3.02320880069695e-05	0.00218732206397846	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03877760210029	5.46389172281431
Merged-chr8-126598499-8	28.5682501715063	0.236857792219028	0.349190371877077	0.678305621503238	0.49757793512135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2598956157756	4.6206531992482
Merged-chr6-29198778-4	9.23818233327222	0	1.34733878346186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4071295-4	9.60067554064772	0	1.36008115931161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120524357-8	52.4792887513833	1.01552386503278	0.414051899066494	2.45264873152942	0.0141808741818627	0.256867090853673	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95603210165854	4.75637232214582
Merged-chr15-80445080-5	21.4232856584172	1.77714358735116	0.400748924748762	4.43455609635208	9.22621947417325e-06	0.000830344477477787	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67157851277979	5.56989371621304
Merged-chr2-163535121-4	7.81557949497732	0	1.3536734581126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139233918-7	29.6028761061381	-0.728946499551234	0.476241179925048	-1.53062467144474	0.125862180643256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07125801836978	3.08215052173051
Merged-chr1-167342017-3	7.24173165384558	0	1.36526057752076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74960879-12	74.2402384735668	-0.454562292708508	0.223236229276257	-2.03623889447614	0.0417263724108496	0.522386890345779	C57BL6J_F1_Control-BALBCJ_F1_Control	6.86785424815523	6.41908646734377
Merged-chr13-45031074-8	25.0065396836885	-0.303490679110085	0.418341969663851	-0.725460750098654	0.468169415606833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55001388771	4.29642481911029
Merged-chr10-43504473-4	14.4342935937872	0	1.3768943291744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100454426-11	53.4268809216637	-0.253002133800123	0.306415237676114	-0.825683917415198	0.408983417685763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70057558824581	5.48971207838741
Merged-chr4-99177454-5	36.2927719616278	0.381803844004389	0.288465243256436	1.32356966022759	0.185646006959304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78014830339723	6.07129762923366
Merged-chr1-144239375-4	16.3365261375977	0	1.42460476662604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-106034484-3	10.2937489051043	0.68235382339315	1.06150169845308	0.642819342058083	0.520341331035445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.18984215491549
Merged-chr3-98084031-7	25.4961968483729	0	1.34782769027032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108718282-2	4.10881004390801	0	1.39237674335211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115634282-4	8.57040202483715	0	1.35364424798483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158138010-4	9.12519985067798	0	1.35964246985094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95706486-8	28.1257254014126	0.00947057702498782	0.362701821016041	0.0261111923796185	0.979168649879239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46370318477014	4.47562029019392
Merged-chr11-77335251-3	7.11134852479253	0	1.39936676717759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132982825-2	14.4474665191612	1.22954254834076	0.560098116900976	2.19522707047084	0.0281473133454086	0.406390386757787	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64297019641287	4.2134204649363
Merged-chr6-26454556-2	6.39819299964744	0	1.37824437382369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114794104-6	25.142978087823	0.191887925318635	0.406658342173901	0.471865213173414	0.637022999514903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13596911208159	5.51351884436094
Merged-chr1-13652302-4	12.7285493903238	0	1.36294210199353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89025709-10	54.1665059028181	-0.0202086331219654	0.334469741827274	-0.0604199142546099	0.951821198349193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13671402624037	5.18047090113733
Merged-chr17-57093776-4	10.4938794062194	-0.00313851390385048	1.14892623528349	-0.00273169313004334	0.997820426937403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.723581231604105
Merged-chr13-3637091-6	19.3681843807286	0.713049905298089	0.46471332632838	1.53438660976601	0.124934569806527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86290348626014	4.18696808642238
Merged-chr2-58496788-4	9.54018214703514	0	1.36894105610734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8973986-7	28.4402706548397	0.891544391032024	0.373560933956136	2.38661034918793	0.0170045033126832	0.289249040783059	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64793920622281	5.54590943640453
Merged-chr11-18011358-5	17.3012387417257	-1.4353845084023	0.576132441618671	-2.49141413451656	0.0127235717292554	0.238496770907102	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73484659834735	2.47549643264008
Merged-chr10-122882807-4	16.6686531870329	0	1.34497068982955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-26711672-4	9.05509383405811	0	1.34507577297954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72109718-4	6.59313338824725	0	1.38041477599944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8345640-4	9.12753230134461	0	1.38194789782574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124599191-4	8.5505542870267	0	1.36306445075526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70855712-4	8.29982376567572	0	1.34981426588357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59188812-4	11.0177992910303	0	1.33980301046111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130788546-2	2.64495436990905	0	1.46035103722944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75277616-4	8.34809471132412	0	1.36241148624526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35117696-4	10.592178345917	1.42916512719492	0.894406339161235	1.59789243950929	0.110066916979528	0.96551101056988	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.34140313130864
Merged-chr3-27773365-2	2.49713469181517	0	1.58717218872455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75721197-4	16.0545755809875	0	1.34902290374441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59204842-2	3.24290809291705	0	1.47552267469574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-51982048-1	1.1780740511065	0	1.87132925401941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19216492-6	15.3814211062184	0.201290415888461	0.585871610677335	0.343574278425517	0.731166471232621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	2.54555707886033
Merged-chr5-123277509-4	15.3842071922032	-2.16442346694749	0.619490730293244	-3.49387547078053	0.000476063024244298	0.0207691090970271	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25894511413138	1.332595529004
Merged-chr7-99435025-5	22.0196982243392	-0.450312556748176	0.612902604971183	-0.734721231555785	0.462509287125349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72389951615654	2.47318570338575
Merged-chr5-88601414-4	6.55935242210777	0	1.38290141698826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8433520-4	10.8490187862951	0	1.34463610180197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19120116-4	7.33890370305625	0	1.35921279093853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118589450-3	7.96760296859908	0	1.35248899112478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124790282-3	7.74380846525449	0	1.36717946432499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91057666-6	23.1358915289063	0	1.33687172585521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45627009-4	7.260982917078	0	1.36518442114098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17410395-10	46.5287402968845	0.0627018697216386	0.288946376045655	0.217001751604358	0.828206979882419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51801470180997	5.56790518319194
Merged-chr7-126194357-4	8.87257183825283	0	1.37122183222758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165663933-4	9.45548655622756	0	1.34738169812915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80194025-4	20.8616918861162	1.1146831612016	0.499069829410626	2.23352143430104	0.0255145784533514	0.380185098996287	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05186991320511	4.07204007602513
Merged-chr14-52244579-5	46.366444488896	-0.878784395129519	0.43441693084657	-2.02290549177489	0.0430828922477973	0.532744071814835	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0005199834363	3.30090514877065
Merged-chr10-81519759-4	8.22210108052684	0	1.35158321413184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-15202385-2	6.36815158225037	0	1.39761903007936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45523056-4	7.23640848842918	0	1.37251848205896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70213828-2	4.02675611726851	0	1.44069569007852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8638890-6	16.0297683312537	-0.140394128864585	0.398431615334994	-0.352366939422075	0.724563092550054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82964895416486	4.68171037623603
Merged-chr11-11777391-3	7.02557552364997	0	1.3500409758782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84267929-3	8.88146431664935	0	1.36976290875177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15355320-1	3.84737028727456	0.63833645090638	1.38786086933837	0.459942682302652	0.645557362573215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.4965005622044
Merged-chr11-96400915-3	13.0788940975948	0	1.38367187798555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24595524-3	4.60291728339699	0	1.40506987919848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122058042-6	21.8488093089715	1.74422343484222	0.57635261134308	3.02631305994717	0.00247555845598999	0.0733745267770774	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48095192489459	4.74415265237931
Merged-chr7-84163769-3	6.22261323144426	0	1.3544979131563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127762451-15	90.0440470278121	-0.897075374778038	0.181611485274079	-4.93952997204014	7.83111065772995e-07	0.000105108973887294	C57BL6J_F1_Control-BALBCJ_F1_Control	7.37606647542406	6.46155238848521
Merged-chr8-79501411-4	7.47671430782658	0	1.36030778937049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71528860-5	21.0177522771169	1.78029592202193	0.578912804561874	3.07524018814764	0.00210333093215785	0.0648893110903339	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53350380922037	4.56323518137677
Merged-chr13-54207268-8	27.4073536502104	-0.533311557754707	0.390000971643591	-1.36746212581768	0.171480500880481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81575681070065	4.3157765261359
Merged-chr3-31327991-4	9.34307229872371	0	1.35590560272237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115653589-4	12.1758631973971	0	1.35086571682797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106232616-2	5.03331590422628	0	1.42157910726513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84854707-3	6.99912470274432	0	1.39536851418411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128724368-3	14.0450774820045	-0.51944321405351	0.92235354414575	-0.563171483809496	0.573318118781734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.730937814817307
Merged-chr1-52765447-7	31.4337102315197	-1.42937276961722	0.438785828279906	-3.2575636620274	0.00112373049154055	0.0392991940422098	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50662221229985	2.58676201280777
Merged-chr5-130089361-4	8.86482831964257	0	1.36414448487119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45981218-4	9.25080166279986	0	1.34912595224851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26452926-10	45.3877573463324	0.563611031203007	0.269183735698909	2.09377817623211	0.0362797451202772	0.477397885498221	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84280771808116	6.44479287853369
Merged-chr6-67060212-3	5.53850556662871	0	1.363693168242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87149452-1	6.42716058200037	0.640216983887232	0.90945548567832	0.703956371663121	0.481459943865599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34574658350842	2.09824818344695
Merged-chrX-38182007-4	6.96353121009807	0	1.36665530833872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-12910322-4	11.1561783269005	0	1.35652460887704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26023916-8	31.6594952146991	-0.303554709715008	0.366797896264688	-0.827580290962077	0.407908233819984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6052266451372	4.51252246071918
Merged-chr4-139216762-4	13.9062419703636	-2.9426185599978	1.10777696259259	-2.65632763576437	0.00789968229461509	0.171226227798718	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	0
Merged-chr8-92875992-7	41.7082504044621	1.47803310968245	0.36559292046457	4.04283843298788	5.28080103613685e-05	0.00346689690245608	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03342208775641	6.56177555978122
Merged-chr17-50675440-8	28.6158605504041	0.232938059174418	0.333433886308311	0.698603437561327	0.484799894841849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91118754832941	5.04029058365968
Merged-chr13-21941034-6	19.3480334690417	0	1.34150361602364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157049128-4	7.16878537180704	0	1.360670299346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22331151-4	10.2249926579111	0	1.34916189591162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127359600-4	11.3283506831176	0	1.34729876312073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55255258-4	10.1679422271169	0	1.35173359789242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-20939253-5	20.2815503921807	-0.87378580535293	0.424482605429721	-2.05847258327196	0.039544790467493	0.503069334196689	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80674189741661	4.10041026185084
Merged-chr5-129730549-1	10.7311507863462	1.28858438393416	0.693133858433583	1.85907003135908	0.0630172124966644	0.687964776249851	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79169352973302	4.60799017648336
Merged-chr9-5334559-1	3.38245304468778	0	1.4136224119137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36239166-1	5.29519677538152	0.396078332504765	0.610954189331404	0.648294650271916	0.516794393482536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42943515619929	3.6311638166951
Merged-chr2-79048877-2	5.75522741478716	0	1.37765107379649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38892231-4	11.4937259843633	0	1.35548784574079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71984605-4	7.78954479658003	0	1.36758304027462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5232467-1	2.29606930212637	0	1.4530172064637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94487343-3	5.99587687749191	0	1.36928842890891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58396684-1	3.44687501489052	1.12639056153184	1.35229378131693	0.832948119035867	0.404873989756477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77777167463237	2.83673351012139
Merged-chr2-169723977-1	5.2450208796044	0.507607184749867	1.16433729105017	0.435962318351954	0.662864069330535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.17858215524007
Merged-chr13-20031857-1	4.91290325598528	-3.05503182058319	1.00501676080892	-3.03978196157073	0.0023674947691943	0.0709061422361615	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71055674032291	0.723581231604105
Merged-chr17-40873820-6	13.7745440219144	2.17659002245943	1.00602800606258	2.16354814114791	0.0304990452307718	0.427844541857941	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	2.15306841387519
Merged-chr6-116141006-2	3.68252633372002	0	1.44720245260685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9886259-8	35.5668616759343	0.676273755068312	0.315062814970453	2.14647277601368	0.0318352785071116	0.439110353810728	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70179735587055	5.28966303754307
Merged-chr12-102356988-5	23.4164494653586	1.6537586594582	0.543511192904529	3.04273155925363	0.00234441366326455	0.0702923233984543	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67384833470829	5.35472100304157
Merged-chr10-78148153-4	10.2969283043507	0	1.37592727800218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36185394-2	4.35272406905836	0	1.38232805064944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76565535-3	8.15496940380938	0	1.36541306285109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18858757-2	5.01802543471946	0	1.37136497046965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114892281-2	11.4816991159937	0	1.34581873652691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-121029216-2	5.82922665218437	0	1.36300926696846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153803158-4	8.57046822111826	0	1.38121875405854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56896533-1	3.09829673611722	0	1.42878345953697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21938179-6	25.8923175702283	-0.27413347889475	0.774474581507742	-0.353960588817607	0.723368419157748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88474138445191	1.38572824442771
Merged-chr2-170159142-5	15.6541584126587	0	1.33993760949527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62192192-7	24.1164716850991	0.826561907446	0.434592605675379	1.90192354092514	0.0571811510960796	0.646621633541042	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43935206184991	4.06271125307045
Merged-chr13-95842178-6	31.5052173006593	-0.712412220732846	0.408125912996804	-1.74556968338941	0.0808857540583836	0.799721481422276	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90650197166877	4.6430061033652
Merged-chr13-61804285-4	21.627356324137	4.26431288583065	0.774219665186737	5.50788500677275	3.63170502519613e-08	7.12436066356776e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	5.18228588040948
Merged-chr14-122638346-4	11.3579605794509	0	1.35535779796879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9189274-2	4.46007771521558	0	1.38336279633342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-101902302-4	12.4533761888266	0	1.3478962194988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71296993-2	8.42281800266929	0.0708751494681107	0.768331332558813	0.0922455540529261	0.926502945408343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50724812564465	1.73795749839718
Merged-chr9-13314149-7	47.8585156616051	-1.66207766510656	0.318322542827187	-5.22136337045059	1.77610645425116e-07	2.82302253645143e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01413761953395	4.27964674573716
Merged-chr2-165112352-4	10.1517616790694	0.00363782161379829	0.75932252366543	0.00479087805302767	0.996177446991672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	1.75589456049906
Merged-chr11-64600532-6	21.4133928983083	0.0618974824544078	0.53177210549914	0.116398513224586	0.907336713660592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49434837322938	3.17279168336923
Merged-chr15-98389955-4	9.41725883752155	0	1.34848937317861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48275112-5	19.8699960609884	0.108300274418167	0.485640440188567	0.223005057766844	0.823531570095302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80278416999245	3.89498822112673
Merged-chr3-90446558-7	18.2202967226221	-0.694779311602418	0.487538011890598	-1.42507721379133	0.154134882530797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09951874329829	2.77655213236489
Merged-chr14-105297533-6	48.8030597454298	-2.91428621619796	0.362229105927182	-8.04542254752941	8.59483466048204e-16	1.13952833490035e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	6.42687679536054	3.2156456695102
Merged-chr2-24304861-3	13.1813325156204	0	1.36325463053343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114982074-6	61.7538353570435	-3.16881009763725	0.340629628024548	-9.30280233112573	1.36791864828783e-20	3.91361525275148e-17	C57BL6J_F1_Control-BALBCJ_F1_Control	7.50880626629625	4.10080636151597
Merged-chr13-34044118-3	12.9289342652472	-0.166020250554823	0.493772311157623	-0.33622835222493	0.736698674227242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75506388709536	3.8030833714597
Merged-chr1-95381207-4	8.42212114822564	0	1.36758857427372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53191346-2	5.30665048906522	0	1.37120224142722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61132157-4	14.2729402089	0	1.37401977088575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-9926275-4	8.62092722828124	0	1.35672117311705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87718740-8	36.9858974690989	0.363774588393527	0.333924664547044	1.08939119213303	0.275981413848574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32833099705406	4.58645270072961
Merged-chr13-107168825-4	7.39569016531808	0	1.35675873076821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116434943-6	24.7141619040217	1.59291567614787	0.344467869614012	4.624279407925	3.75902883440164e-06	0.00039600203180085	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40382733021051	6.0278212621946
Merged-chr13-93901457-3	6.83332705693023	0	1.38477467509011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4370278-5	31.0875193528012	0	1.33888916900937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27692390-4	6.23806301930122	0	1.36344302795815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111592641-4	8.1125750569343	0	1.38340070949732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139398062-8	64.0993809399981	-0.102887243129091	0.338695311689746	-0.303775220908102	0.761299146026297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.640590056737	4.5664058013963
Merged-chr2-163433950-4	9.79156332440084	0	1.35949124622953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137388441-9	45.4080994924409	-0.409801107864788	0.316306138171113	-1.29558379813387	0.19511891397494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37126451981735	4.98419087092971
Merged-chr6-72115066-4	9.68510471806049	0	1.38868220788268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173426674-11	40.5428207964415	0.24396317398944	0.354557423598494	0.688078031235097	0.491403644039607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79307979983898	5.09823577873212
Merged-chr13-20784539-5	34.9272937222096	-1.55552499601317	0.520045396674016	-2.99113309330614	0.00277944323890366	0.0799106262543844	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8532385433737	2.06541838463802
Merged-chr15-100049852-4	9.35156317665415	0	1.35475603707292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83878319-4	7.669211425557	0	1.36024196735286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69154967-8	33.0480383913863	-0.18704076602615	0.374260102510494	-0.499761435353385	0.617243068149871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53205968791777	4.33509808872742
Merged-chr1-36134751-4	5.50576372255423	0	1.40045789686668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45393816-2	4.88625243306782	0	1.41167681969295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97123529-4	13.8257222265503	-1.14710089622849	0.956650772534183	-1.19908009188118	0.230496804314147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75485430327507	0.724326877898254
Merged-chr7-98872084-1	5.13830210402458	1.57541970676499	0.74049844337918	2.12751251653649	0.0333775224602518	0.453819095401908	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02938698498506	3.44897370117429
Merged-chr18-80524839-3	6.45234422256016	0	1.41088770082385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34435416-4	12.8140645757053	0	1.36163953411961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3130865-2	6.22252087462394	0	1.44444058284851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135581282-1	2.31049515573411	0	1.42400114438996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32887431-1	5.39481525465747	-2.53972463054418	1.03968095738745	-2.44279229363411	0.0145741224397099	0.261921329562178	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26087918380575	0.55634759613363
Merged-chr6-76513206-3	8.1403790363619	0	1.3682735857844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182506784-3	7.03935116669332	0	1.35398877916095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-40530952-7	32.3026642829659	1.62372801429338	0.542771660075712	2.9915489951463	0.00277565993621819	0.0799106262543844	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0509200531463	3.78707571175388
Merged-chr7-80775458-9	40.168431283448	0.880347854179621	0.289233473626036	3.04372741903956	0.00233666753920109	0.0701374438229884	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52901448815082	6.45629075511207
Merged-chr8-108721029-3	7.71310210631524	0	1.35668097528277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129375290-3	6.16222751232579	0	1.3570148324098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58814644-4	7.61968122847149	0	1.37591900388373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96106605-4	9.97854140261878	0	1.3822954364358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106791623-4	10.0603849612228	0	1.36072510838303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-87056039-2	5.33351736723425	0	1.37113168516188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122946006-5	21.3694948475324	-0.561956166521708	0.472132657555683	-1.19025057370752	0.233947920989153	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90412740212786	2.86386797009556
Merged-chr10-121599470-3	9.68121137571522	1.4165041551688	0.873301125094123	1.62201114193702	0.104800962479098	0.939097837791927	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17564474993106	2.07145366060388
Merged-chr13-92968625-5	19.300280619279	2.17109390532745	0.597640262452601	3.63277717672116	0.00028038713095806	0.0137932706350671	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59510946442266	4.36181818263911
Merged-chr19-37509881-4	6.40279932463299	0	1.36325334800994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87597713-4	7.17910569230919	0	1.3565151855553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25801236-3	7.50221620736834	0	1.34977946136676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120510857-4	6.78048627307893	0	1.34967303262309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25117764-2	3.79627991407787	0	1.38585861166054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87745490-5	17.263751258507	-0.293872365950511	0.564920524616529	-0.520201255123441	0.602923310627185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29492926749591	2.60065479767424
Merged-chr16-87712193-3	4.63292014278777	0	1.39713543011798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68715588-3	7.49585905509765	0	1.35557794898337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32343682-3	10.2204718353798	0	1.35750690557099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11581346-3	16.3613167980608	-1.36846515920077	0.632758064343475	-2.1626988833728	0.0305643470473944	0.428428917263876	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46209722589946	2.30422205395754
Merged-chr13-95942104-6	18.3617778966218	-0.810024987097795	0.570697898671605	-1.4193586291158	0.155794487283531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19189160018641	2.8554857591411
Merged-chr12-44176499-5	20.9383777503497	0.566942267293791	0.538435482561856	1.0529437335673	0.292366780662585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23968450994415	3.78078751068214
Merged-chr3-137952993-6	17.9887047515551	0.521962870755846	0.542476688285902	0.962184886515815	0.335956739576655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31747866375397	3.23411977528857
Merged-chr1-191458445-7	27.5191245551453	-0.5768016187299	0.369342270466226	-1.56169944480439	0.118358809662461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88983905759146	4.03323394520187
Merged-chr10-93422204-3	10.0176361178518	-1.2354608290497	0.793191451260562	-1.55758212861002	0.119332337858874	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51622356219184	1.30281892590853
Merged-chr5-77246375-5	17.1257695568311	0	1.36691446512169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67302554-4	7.74835171247457	0	1.35976915277372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9495181-4	11.0028452384927	0	1.35107050006334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129526196-3	11.40640087212	0	1.37464617614805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93095383-5	33.816068013974	2.86055206862516	0.630123701704926	4.53966746669798	5.63430155643381e-06	0.000551846843794929	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	4.46331558000993
Merged-chr1-140261361-4	7.15871911507001	0	1.37215493602299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97607335-4	7.37370430696308	0	1.35131111308574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122329255-3	4.87099003775878	0	1.37128410256427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10711208-3	9.41852841755065	0	1.35272274047115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45093984-4	14.2425036640527	5.90827123419274	1.07532119065165	5.49442462917734	3.91986289874976e-08	7.52932251989887e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	0	4.61542131050338
Merged-chr11-80355014-4	7.17806640883552	0	1.37168624700683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84314755-4	7.67372675748507	0	1.3618422538362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88058070-7	22.8586346836072	-0.523998609510277	0.407563025113125	-1.2856873102383	0.198552211694019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04125271970938	3.66587236070126
Merged-chr7-128226549-4	15.2858417892778	-2.16433485868444	0.998660783754519	-2.16723725802821	0.0302167678102553	0.425311569497065	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34574658350842	0.577068348605183
Merged-chr2-14272278-4	8.75338987974101	0	1.35924897056439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61086366-3	7.14814595677016	0	1.36402781590177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5145984-5	17.1592571313309	0.535455533277493	0.565339588080846	0.947139638841144	0.343567628430283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60723990317186	3.12594007550568
Merged-chr13-94813949-4	7.3807330717513	0	1.36628372347369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45179465-6	21.0979058474469	-0.430607586435226	0.432628955668555	-0.995327707018119	0.31957690637842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18813624938837	3.60827860261217
Merged-chr8-36172465-5	33.7270456439462	-2.86728061221977	0.482473511744455	-5.94287674333186	2.80063022091078e-09	7.28418460184159e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34690599230852	2.70089346712193
Merged-chr11-89023606-6	34.5322107833482	1.70316349386759	0.358743192255284	4.74758415110385	2.05860748618398e-06	0.000233619716788048	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40193961722189	6.14420055902316
Merged-chr13-37772891-4	9.83675424331373	0	1.34979255571396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55395853-2	4.89201325446346	0	1.36937055442565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90108492-4	9.25526375633462	0	1.36523847217319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31880688-3	7.66489318212604	0	1.36532024975327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106901642-4	6.32560058951641	0	1.35766355398838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27114817-8	24.0307432777284	0.0643972920925709	0.374924327765867	0.17176077230386	0.863625606291734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56497550699154	4.39813074033339
Merged-chr1-86228908-4	8.49530724139056	0	1.36079897260614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73613337-6	21.4710244071243	-0.134111950331003	0.472163918574825	-0.284036846220281	0.776382143775848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51422312804055	3.43348055339362
Merged-chr1-40081254-3	9.77426051811547	0	1.36001079615037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167552418-2	2.59123197190683	0	1.61185775042775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99200952-1	4.74916098508527	-0.999010487881915	0.910369392433957	-1.0973682729062	0.27248043684809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	1.18909650862134
Merged-chr1-164080132-3	5.77150480352744	0	1.42595616684677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97205427-6	23.8060545475267	0	1.33798712156027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103378487-1	1.78313882115617	0	1.4782300869336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-30941147-1	5.8385206183139	2.78261516013482	0.939740601050234	2.96104601314983	0.00306596130256099	0.0863984398371762	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45575152610536	4.70480598515162
Merged-chr14-114869548-1	2.67555979990693	0	1.53803428093327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-166789172-1	2.42442002968002	0	1.45841159358138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31228934-1	4.32617719306707	0	1.43473215017465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76631313-4	9.64587456111679	0	1.35485815501687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-153719779-1	3.22482724061442	0	1.42810860552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119809313-3	6.0623076106402	0	1.37040288728024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149617218-3	10.5586214356333	0	1.34742054852003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102741867-2	5.3413895851368	0	1.39434636518702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130795005-3	7.61318734206047	0	1.36680157346519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19225162-5	29.4361110147332	-2.4005390261779	0.452660767312821	-5.30317447307944	1.13806055044621e-07	1.91528896166272e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00653039279541	3.50087901026315
Merged-chr13-3907420-1	2.59739789633006	0	1.43379451441509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75501012-4	14.8269797040766	0	1.36651792811729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174614136-8	32.0230586079453	-0.509856108776069	0.33068659415451	-1.54181063819553	0.123119616174807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36700910986885	4.89459361018263
Merged-chr5-129779228-8	27.9312151228609	0.012168081953249	0.386737038803244	0.0314634512145594	0.974899939410292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0069778153769	4.98073771441742
Merged-chr7-141491082-4	11.2439527954449	0	1.36231887537494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89029009-7	53.9942506527301	1.90551027806636	0.349011063623355	5.45974175799408	4.76827636287314e-08	8.99995606977157e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6498631620363	6.61282943560733
Merged-chr5-31767377-3	6.82225291591288	0	1.35549198837574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139087123-3	10.619793841318	-0.959474468656177	0.573999553550884	-1.6715596078789	0.0946111953370335	0.879140165354839	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03866390979577	3.51072596414483
Merged-chr11-109332929-3	8.52983706631487	0.62849663923833	1.05649821718878	0.594886606539372	0.551919270629183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.993299420549897
Merged-chr12-52120438-6	17.9174365835852	-0.408755604598945	0.515788392231802	-0.792487017457432	0.428076758726989	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53737587062995	3.09008210478717
Merged-chr12-73054061-4	8.89268673135511	0	1.34810322254604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23410237-7	31.9898389714824	0.400024565549793	0.412012028148209	0.970905066407178	0.331595555007693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39628998680276	4.54766600682501
Merged-chr14-55735292-4	7.90486856691338	0	1.35851058456207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12585385-5	31.1166887368712	-0.309972177713149	0.478274106606126	-0.648105706396565	0.516916583447799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82515864588891	3.05359677724837
Merged-chr14-118713528-4	6.14704383187304	0	1.36580165016179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53122492-3	8.50228065329411	0	1.34801702750254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95716338-4	10.2825744581563	0	1.37834112530887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80641464-4	6.84508396369942	0	1.37396845575503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43668777-2	5.35041516108212	0	1.36095431833672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152870980-1	3.50195553171599	0	1.40508487249907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38949196-2	6.52277622204789	0	1.37551043316099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81110357-4	10.9950671234004	0	1.34833726297195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145030850-9	52.8736149282699	0.117218604225263	0.429465701532229	0.272940548702855	0.784898916095182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32608564733171	3.45682276241129
Merged-chr5-150840783-4	9.32433104583884	0	1.36385392645165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53410907-4	7.34679542275549	0	1.36056748366272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5035201-4	10.6103650349312	0	1.363219181971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40553790-3	8.08335874965218	0	1.35074164009327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95781932-3	6.86027913138967	0	1.38514366505703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115489389-2	6.05612700757986	0.984743125420755	0.760657562604239	1.29459453745431	0.195460137777511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84786608550645	2.95587341628926
Merged-chr3-136215283-2	8.75818336893832	0.636689995208162	0.918856469426442	0.692915614563381	0.488362509986472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42539729206526	1.76831516661334
Merged-chr17-73027309-9	39.6388514650608	-0.331571287152907	0.32667291865949	-1.01499471861187	0.310108345058897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32239141774309	4.92194432761952
Merged-chr11-74988265-3	7.92833134510596	0	1.37507014172918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90840220-11	53.9514504440491	0.335326682592725	0.288851380967654	1.16089693415824	0.245683815796883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47250635787707	5.71213456035558
Merged-chr1-33765748-4	8.49614292942486	0	1.3691830811989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64654920-3	16.1051939939951	-0.201670907819039	0.543988598242932	-0.370726350644905	0.710841361739808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05366359471242	4.05362089290255
Merged-chr3-126660395-5	24.8297848160642	0.108573400216808	0.52801264056179	0.20562651701158	0.837082662553636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58811246304114	3.10894600548109
Merged-chr9-66831084-4	11.3094141072191	0	1.34274909009082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17560178-4	8.48802861207026	0	1.35903600555122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108306472-4	9.75115686532087	0	1.35343245708287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134519984-2	6.65883704104137	0	1.36261844040102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23526574-4	8.74996829916339	0	1.34868500895325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123893701-8	32.8038270265872	-0.874633769068131	0.369148912425237	-2.36932505996552	0.0178205833835843	0.297332440806709	C57BL6J_F1_Control-BALBCJ_F1_Control	5.55851054810498	4.60342057182493
Merged-chr6-108400010-3	10.6825846337449	0.3633436952423	0.806564835441966	0.45048293612156	0.652362255438823	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65326585997348	2.02497645810754
Merged-chr2-180251446-4	7.3989351684808	0	1.35202278250264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62892657-5	21.0226290279644	0.527654769074549	0.530533572057126	0.994573759071619	0.319943615333563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36136366976121	3.77421359636039
Merged-chr19-47147927-8	25.461259420041	-0.188465627276068	0.393418010288662	-0.479046770476486	0.631905356224528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27999251450976	3.68352220322534
Merged-chr1-51934676-10	81.9884577896022	-0.440498977486557	0.244120085378167	-1.80443561947874	0.0711630433425418	0.73922260138682	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04557981286015	5.59957389243091
Merged-chr8-25096990-3	8.16228679706159	0	1.3648158832568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67235272-5	16.0579109469977	1.4172354138822	0.612222689386648	2.31490181342682	0.0206183061058078	0.327195153211317	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17540470129796	3.17700544952666
Merged-chr2-160348303-4	7.54426847465431	0	1.36367535816673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121332187-4	16.2945936818438	0	1.34189058720071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98510651-3	7.58596758242702	0	1.3617586201446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81359006-2	5.3410964124214	0	1.39490450549656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42248903-4	10.477760510756	0	1.37640729129237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141559467-8	44.4746300679163	0.220547456668473	0.335626178125903	0.657122331458123	0.511102260913004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67330117972917	4.99220706479781
Merged-chr2-31025741-4	12.9380988735567	0	1.36053543770636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133659652-7	32.1107235693851	-0.267975182573303	0.373981770047364	-0.716546110093454	0.473654206414564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98591149281508	5.67494298092365
Merged-chr12-84855345-4	14.3763637270107	0	1.36919732738956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85444848-4	7.52138554802389	0	1.36264965670787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85304892-4	13.1925572107036	-5.14385188376436	1.05423490675487	-4.87922743859627	1.06502192632965e-06	0.000134323728290843	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57696799951766	0.303163067301871
Merged-chr11-117706443-3	10.3945585121451	0	1.35651142922913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74724814-5	29.5509144512154	-2.62249510228177	0.506933672293549	-5.17325095099061	2.30055697701229e-07	3.53265470941839e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.90180212174071	2.68014998758554
Merged-chr17-5747549-2	5.19917570369247	0	1.37698201604431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149170377-4	11.2954852508383	1.37406880855257	1.11238958431111	1.23524062786286	0.216740962912594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.897114879832661
Merged-chr9-111554779-8	41.7259408168221	0.313035028141292	0.260719447481747	1.20065852840996	0.22988368742002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84750634608885	6.22465373035147
Merged-chr1-170162018-4	8.29880052735158	0	1.35748014427088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33316649-4	8.2650214642256	0	1.36371618388819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157064234-2	4.15478794030634	0	1.38199006422011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32774953-8	36.8822757093831	-0.276405928587323	0.387365629225441	-0.713553056165598	0.475503594386685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62544907673947	4.29777121058795
Merged-chr6-135228501-10	60.2937645877319	0.558297780261318	0.285284560418783	1.95698561268709	0.05034915990548	0.591896622686416	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89507172755365	5.44805451838446
Merged-chr6-140491124-2	4.41780428971975	0	1.37341315690898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89261977-4	19.8215258361158	0	1.33870726793368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65381725-5	13.4816779892239	-0.717265991708515	0.619523600253452	-1.15777024703349	0.246957808230159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37920855875892	2.6039183091679
Merged-chr10-121446112-7	27.3399568386866	0.221124325310557	0.372981336170377	0.592856274206569	0.553277343085285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19001432765801	4.52605749648452
Merged-chr14-46818818-2	6.40147861076976	-1.85168798657189	1.21087587726304	-1.52921370500607	0.126211474150382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41083941945204	0.303163067301871
Merged-chr14-74983227-2	5.73753114585718	0	1.3757428896456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165404519-2	3.53574850146697	0	1.42149291144202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91764189-1	3.64403700463673	0	1.38205475755317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124715256-8	39.7912853810916	0.298192561675709	0.360520756744649	0.827116209253144	0.408171197707943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04339626408529	5.45409845250498
Merged-chr7-117490818-3	5.9058964912154	0	1.38164039106601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88655329-3	6.41201700365294	0	1.36148003257619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126436380-5	17.9256910840524	1.37127512750402	0.574243172203468	2.38796940718024	0.0169417519926749	0.288728862513552	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94908359290188	4.22525359043194
Merged-chr2-117403944-3	9.36084693982418	0	1.34959544454677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19613291-1	2.77481150316681	0	1.43824469392259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29975892-6	23.6046969842117	-0.0369191416287262	0.441491337296146	-0.0836237056310833	0.933355618579946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7576543370785	3.72198415482516
Merged-chr4-123632330-2	5.20473952338042	0	1.38823143183219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88650401-17	101.480809811476	-0.188510928235912	0.30240621276011	-0.623369892157118	0.533041478349382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64858793497331	6.42880869175054
Merged-chr1-135268285-4	7.41149591042557	0	1.382529938041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102889083-4	8.30022346854946	0	1.36994561689047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52189672-3	8.14696604582612	0	1.35174869994574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17679386-5	28.7277682814071	0.0547706869191672	0.299471562849747	0.18289111125602	0.854883457455151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11957019052753	5.32858084514389
Merged-chr13-107954462-8	39.0789376965781	-0.207605596683147	0.371672096501382	-0.558571920349622	0.576453908070107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35026348312207	5.07849744867655
Merged-chr4-109760709-2	4.608906999032	0	1.38550717153526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70361640-4	6.98839583607039	0	1.37278049064639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95644292-4	14.6971777781828	0	1.36228849852241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66877602-4	9.482151885774	0	1.3909346472787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43898729-4	8.21570803646027	0	1.35221045508881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128680113-3	7.33109609565679	0	1.36680432055326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165741819-4	9.4549286699276	0	1.37774715160337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21654027-4	9.26939071654798	0	1.36381156073281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46905897-4	8.88342205567767	0	1.37132969754957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102173865-4	11.4694046385344	-4.6974400713909	1.11416477149514	-4.2161089558479	2.48553705851857e-05	0.00186617830060789	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07683367856279	0.303163067301871
Merged-chr15-75062349-6	25.1232290982042	-0.486857080514674	0.359311464144486	-1.35497229868207	0.175426382967146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41601415531482	4.93648027236634
Merged-chr2-36271371-3	10.3973162482423	0	1.35176931009849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84083570-8	17.5641968043305	0	1.3548546953457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5238003-3	5.5378836363849	0	1.38090374083898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10833817-4	7.98308017181246	0	1.35229932751022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43293313-2	5.06098884448415	0	1.39706646262566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104223879-5	19.1068127922859	0.255606930942532	0.920658286121252	0.277634964889534	0.781292588812563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	1.14046671619316
Merged-chr11-64065388-5	22.3782025248589	2.71607921848189	0.534862465046473	5.07808903405831	3.81250038291387e-07	5.46817172334604e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57897495851616	5.47748336779853
Merged-chr2-66142408-4	12.3811422912471	0	1.36192583433127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34181849-2	6.17040511828174	-2.85589567978394	1.17667912673584	-2.42708110893946	0.0152208525771986	0.269771869984982	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0
Merged-chr19-16140283-4	8.67115633743287	0	1.36735089061821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48202163-4	8.50739683449551	0	1.36096164818257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30973876-3	7.59442485563761	0	1.3673879937885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3140019-3	11.5712911460215	0	1.37060044330618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129572754-7	23.3969345934185	-0.455013581069225	0.469197418525789	-0.969770001077309	0.33216114909865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74991339513314	3.26619118338657
Merged-chr2-71837994-4	19.2399236847577	0.941252724010137	0.533823367992099	1.76322877649685	0.0778619122104522	0.78124906587396	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31805786227732	4.23089651983576
Merged-chr7-142449341-7	32.7832845811449	0.274192603699791	0.321313435852207	0.853349325317072	0.393465614236685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93626200951801	5.2922295976573
Merged-chrX-159737578-6	27.2437489312538	-5.42864903831383	0.993507615741387	-5.46412423246781	4.65197672385173e-08	8.8418462493656e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35715214230125	0
Merged-chr6-136449526-7	39.2721516748411	-0.411916657103473	0.369706538024792	-1.11417195731564	0.265205423365208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7767729967266	4.39706229337337
Merged-chr1-176824108-8	67.6945325427473	-0.173596130144625	0.317795201856522	-0.546251576897628	0.584893016932926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65545078856367	4.60325315809326
Merged-chr4-40776633-4	7.45352270634488	0	1.36317345327459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-93980028-2	6.71421696166384	-0.0408946682292074	0.903092160849973	-0.0452829401051584	0.963881785312698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5713323725813	1.54998568242928
Merged-chr10-6916746-3	6.33943262437043	0	1.36146582083654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61084498-12	50.133324655643	-0.210098578694621	0.241844242186319	-0.86873508666276	0.384992045569955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.25017539884636	6.05657579716725
Merged-chr1-131703705-6	42.8929405644645	1.3419459289804	0.383814067485947	3.49634378377632	0.000471680582522336	0.0206110006312955	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19032981398628	5.5446336191891
Merged-chr9-75631060-7	25.2778751504179	-1.57047873040332	0.538406019502604	-2.91690410863939	0.00353524440009207	0.0962305209537329	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88700646773285	2.20150419972061
Merged-chr6-47650944-10	60.9762074037978	-0.259021263231149	0.36457787754704	-0.710468953777176	0.477413376715094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53903584044684	4.37807777166429
Merged-chr1-159201435-4	8.69090113616196	0.525782205830278	0.787063871318209	0.668029908360137	0.504114501344242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.85324938956148
Merged-chr11-114167065-1	1.72400066577125	0	1.54628338320265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-11337011-1	3.46837887434259	-1.35993087278302	1.18308797145121	-1.1494756988484	0.250359881624877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00182956598795	0.67591700901439
Merged-chr6-94583119-1	2.29165197478073	0.595213097481494	1.09430066895263	0.543920984761146	0.586495847759627	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.02497645810754
Merged-chr15-88491109-4	14.5500019284399	0	1.35128742387791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27933669-4	7.33914662882839	0	1.35727265996307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44384501-1	2.22490593619141	1.20690861028291	1.55718875851104	0.775056076976139	0.438306524268249	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr13-100449654-3	14.3239436199267	0	1.35288993866727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82192709-2	3.02951178941901	0	1.43454205815992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77279023-4	8.82389349498513	0	1.35511159835269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137839804-1	2.09101756591139	-0.881385704509434	1.32643272770394	-0.664478255173268	0.506384261768311	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92027594280124	1.85699717634292
Merged-chrX-142518071-3	7.06571656968277	0	1.3794520939915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56797557-4	8.03811853101166	0	1.34957376619543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66170510-3	13.7212570112443	0	1.37598229515585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3281036-1	3.20701411378134	2.01479178278126	1.33831908619578	1.50546443188551	0.132204714658679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.14046671619316
Merged-chr10-94050104-2	9.98596182669236	1.50757945745612	0.81879472435149	1.84121784449718	0.0655896413736368	0.704761279982115	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	2.81083313542288
Merged-chr11-76900221-4	9.96176276506998	0	1.38281725671396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19199309-2	4.91523892454479	0	1.40193088041547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126770248-8	35.9447017956822	0.797919215206001	0.328153835429702	2.43154011642486	0.0150347832809281	0.267433175513079	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46797892634877	5.2887873318272
Merged-chr14-71209244-3	10.4596453858002	-2.40886145097787	0.651547856039609	-3.69713663954014	0.000218044993292673	0.0111817998022608	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83878058955483	2.02004371945587
Merged-chr17-27173873-6	19.0667280852247	0.291682587791248	0.455048397554918	0.640992451261288	0.521527587451066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45294980363373	3.49011699456136
Merged-chr7-80457456-6	19.9460518627166	0.772917772877786	0.638598903503338	1.21033369872322	0.226150871760637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	2.49153154445402
Merged-chr16-52056737-3	7.42338154631761	0	1.39093624205681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34059961-4	13.5164073296452	0	1.34899674033781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20111832-4	12.4349589652341	0.30542544748911	0.844081047924225	0.361843745029244	0.717468800188747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	1.85449916425446
Merged-chrX-10857293-4	8.37208881812287	0	1.35565147507168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92956823-2	5.98750464449651	0	1.37965920519903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52030270-2	5.13427228347989	0	1.38260829427196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53509798-8	79.7975210229487	0.152904860771502	0.368420929412859	0.415027618043259	0.678121685398218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1779042795211	4.39552884873509
Merged-chr4-122860242-5	14.8894289339759	0.281291431190519	0.937028599968446	0.300195139401286	0.764028312399925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.57857133234888
Merged-chr15-84769864-1	7.12110697157592	0.126331110520052	0.932940074587518	0.135411816858556	0.892286281683232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70336127771059	1.32687470302838
Merged-chr15-27922383-4	9.05797000885013	0	1.35842072263354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29728137-8	27.2452787701503	0.215310885306339	0.430711352658027	0.499896006867713	0.617148304107793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14236783925955	4.27463670949664
Merged-chr10-68241134-8	76.336739812656	-0.00671569864282029	0.319870994534935	-0.0209950222357121	0.983249626482319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71442430505194	4.77098226256865
Merged-chr16-91362816-3	10.5470983099447	0	1.43257284493997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20532018-3	15.6999382366912	0	1.42804194768888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59042843-4	9.35450425958779	0	1.37591135240425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122980040-4	10.7013267139714	0	1.34653107049018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73597601-4	9.99248235933747	0	1.35745192532758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122436823-4	9.05479923175742	0	1.34800763598641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47703793-6	32.8258428279597	0.169820906167341	0.288050828127596	0.58955187621303	0.555491123233496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.8080789840181	6.00791784843665
Merged-chr14-59555178-4	9.09811999474314	0	1.36577954547953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149241183-4	8.10943120241079	0	1.36165575248385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149343960-3	8.89267285123628	0	1.34602750874516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30722564-6	20.7147406140964	0.723735509308492	0.574195334894074	1.26043432491837	0.207512725729562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67252980017474	3.50374969665372
Merged-chr13-43565594-8	50.4836120100135	-0.455784923017441	0.353099335480608	-1.2908121800826	0.196768813227802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24184149701991	5.72805004919574
Merged-chr13-56184468-8	32.4157295199187	0.208404176039222	0.375868821030154	0.554459865726673	0.579264165252866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4381544439643	4.57728776439465
Merged-chr5-5358152-6	19.6756710316035	0.317060623019217	0.47870095108757	0.662335477501936	0.507756244811089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13178612559225	3.45208977134543
Merged-chr14-120268690-4	6.29322107439368	0	1.37490253960455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98943642-6	17.8036041578219	0	1.36338424648544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97465335-1	4.3264591807171	-0.430452530594128	1.00563677202964	-0.428039768002278	0.668622167477325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	1.30064958020929
Merged-chr17-10722753-3	8.19755455854435	-0.0350911694175416	1.13914572846415	-0.0308048114834729	0.975425203233588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr11-48874688-4	7.0092565056804	0	1.3547446985956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61132977-2	5.29327686938439	0	1.39106047190924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106155294-2	6.10411853625567	0	1.37041587926235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94513006-2	5.77049726568086	0	1.40927103120942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-87204461-4	12.6215431316802	0	1.37090055305173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44993532-4	9.26207325259969	0	1.37477792321209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21194535-4	9.54593801833584	0	1.37513594373111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101769651-4	9.73774895966153	0	1.37192051517304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35097086-4	13.5916329414776	0	1.34613567701921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32715365-4	8.37446707941902	0	1.34990881597094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13835854-5	15.5822611227546	-1.94474670649064	0.798996027619696	-2.43398795396301	0.0149334920617524	0.266241290582092	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54198101964455	0.88866493597531
Merged-chr16-52082043-4	7.94834015178079	0	1.37176806603418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81137183-2	3.92186244925073	0.554279741554427	1.84967061606253	0.299664024903172	0.764433442149396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr5-102037729-2	7.66310053284901	0.260549591302273	0.781148839764628	0.333546666190762	0.738721669605012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57995335165535	2.89512019427384
Merged-chr7-19474201-4	14.1750360667777	0	1.35155409894083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110682540-4	12.0749430811593	0	1.3505494161429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95567165-2	6.11231427616992	0	1.37234738054473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53216589-2	4.65468938598922	0	1.37814705719443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30190203-4	21.0131878163273	1.48142298204636	0.830989358155225	1.78272196570012	0.0746315738657289	0.761715682269462	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.55491375810168
Merged-chr8-83216951-2	8.57768425321958	0.783424779845443	0.791616123678833	0.989652378737154	0.322344058823352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04181016172925	3.01351449837329
Merged-chr6-135163451-2	7.58603809974298	0.629170818694946	0.750230059042207	0.838637176839044	0.401672941898276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88307314437858	2.73629800776021
Merged-chr14-25736780-2	7.84150418644757	0	1.37975828060945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121252055-4	10.0314579721734	1.75821993883033	1.23877310781334	1.41932362572345	0.155804687296692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.903978167044898
Merged-chr7-49888234-2	2.37129820114301	0	1.607506660362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4311349-2	4.70999036565616	0	1.41873082836246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-42866218-2	4.41080361862539	0	1.36657070802352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91789477-1	4.41090723732259	0	1.37195672660902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90612376-4	10.7249477638353	0	1.35013981375175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56286884-3	6.69419323129113	0	1.4115362120496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96328902-4	6.26246243089425	0	1.37419353436134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106615617-2	7.5881457333896	1.59849310372253	0.877319083229706	1.82202021394307	0.0684519185862564	0.722785722527164	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	2.20146859803229
Merged-chr8-72006165-7	35.8855831439299	0.698024299663064	0.436722047653291	1.59832622010698	0.109970394993632	0.96510828244411	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04461235741871	4.55119231404887
Merged-chr16-49896378-4	12.7263226314028	0	1.37672041012847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66369230-8	36.2641248568549	0.157424758085245	0.318845758600239	0.493733267070428	0.621494567626097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50668115336756	4.74410654522053
Merged-chr16-94617550-6	14.6516721401297	0	1.34651254880325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6355555-6	49.1098169674307	-0.78917919020288	0.525324684452617	-1.5022693841718	0.133027552087251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51279473983383	2.77713251909152
Merged-chr17-29394319-12	78.5441791025214	-0.079155223355943	0.267245146648498	-0.296189563584682	0.76708531851619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.42034006436163	6.34683353563305
Merged-chr18-79995857-6	19.3476922192554	0.297710350683954	0.373300283449	0.797509039996824	0.425155454771572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80995466530602	5.09733655075219
Merged-chr13-92030918-4	9.97157618767533	0	1.35095414723552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22721998-4	10.4292962457242	0	1.35217939334084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99208665-8	36.5479125689483	0.425273324153837	0.365998868490154	1.16195256534045	0.245254733350628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28537141844098	4.70641575217388
Merged-chr14-87465836-2	10.9670361157834	1.17681762682997	0.717559950082085	1.64002690882532	0.100999572129751	0.916333335048802	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30095837608674	3.59755706985514
Merged-chr5-91976890-1	5.85577787791265	-0.159982927516592	0.886651530492084	-0.180434953321293	0.856811115830974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	1.84209355959446
Merged-chr15-93379403-1	3.08685320805294	0	1.43003825756865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126086276-8	40.5601150364997	0.765240834675691	0.372310990873987	2.05538072588004	0.0398422456570052	0.506379385473263	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29025258860506	4.98776339316475
Merged-chr5-135772673-4	13.0034598496146	0	1.34858366347028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120760006-4	10.3055028479184	0	1.34742678300312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123611285-5	15.8333557692167	0	1.34839915394102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180423392-4	10.8159724065851	0	1.36779572511945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54475940-7	26.8732582109269	0.665663427234955	0.341144567035938	1.9512649227236	0.0510255394737087	0.597481856114314	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1317484586002	5.1480307698744
Merged-chr10-30797052-3	6.15822351540068	0	1.36422030471109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58979916-4	15.8148237686122	0	1.34573037878324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84621964-3	16.2112217233959	-1.46717641734434	0.626408482301357	-2.34220394327052	0.0191702363804354	0.311532101466094	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89772002626637	2.01086664255504
Merged-chr15-100543883-2	6.75523076270211	0	1.37207374806211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34518126-4	8.57514639979656	0	1.37699419358184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105048936-2	4.53859772887418	0	1.38162334638587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155764120-4	9.28154249245667	-2.42034745997309	0.868034277773962	-2.78830862092217	0.00529840421919282	0.128808566614983	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4314922584484	1.28091929990772
Merged-chrX-36051954-3	4.45550270603839	0	1.43425481711481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86572565-4	10.0260290139328	0	1.3662378983347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102320109-8	23.7740839512211	0.0497702190869085	0.411386061734315	0.12098178260364	0.903705464572461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85620192713506	4.22563081887089
Merged-chr16-44811773-4	7.76882311018426	0	1.3527177773517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19998140-6	19.0403575741711	0.0532699573714716	0.519886853013168	0.102464521006309	0.918387972726492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96279845563572	3.09527179976703
Merged-chr5-104946822-6	25.4539910443666	-0.122316116561917	0.605230061000058	-0.202098548046022	0.839839682938062	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12380151411632	2.52701482856271
Merged-chr19-40630768-6	35.6111359026299	-0.0673069425072827	0.333890837660879	-0.201583676206306	0.840242207747882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52342550230998	4.46015940694976
Merged-chr10-58405602-3	7.98277654836322	0	1.36807626954793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44723102-4	13.2555917769759	-1.79610287749324	1.17012246541288	-1.53496999722972	0.124791197973304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.303163067301871
Merged-chr2-129381092-12	44.4826854460711	0.295819157743294	0.27713704897755	1.06741108355836	0.285786245686361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45745576453577	5.7892200403611
Merged-chr19-8534796-4	5.87719458214917	0	1.35910710976585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55803262-6	25.0051624719029	0.0931128421292695	0.429516203926207	0.216785400127225	0.828375590417293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87416838001646	4.06323891429054
Merged-chr11-63948616-3	11.5254161999958	-0.269568229161611	0.894154251722535	-0.301478440260507	0.763049687882924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50288339618282	1.27673210875742
Merged-chr2-145832774-6	39.0303180038556	0	1.33712304267359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131761605-7	33.8795171749801	-0.399565137820381	0.411740749871481	-0.970428936035844	0.331832731163684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32432278880875	4.03082260238672
Merged-chr10-117330714-6	14.883148976412	-0.279511589283577	0.475188299690112	-0.588212271779119	0.556389821369687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69807084469279	3.31966845346824
Merged-chr4-149793392-7	33.9242651204394	-0.529374214942161	0.26957358291388	-1.96374662984421	0.0495594820990282	0.586290291060082	C57BL6J_F1_Control-BALBCJ_F1_Control	6.19772469155408	5.77218490491493
Merged-chr12-102497072-2	11.4531196715082	-0.708181348495222	0.669036721279917	-1.05850893675973	0.289823478643064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79115975261273	2.61283681135392
Merged-chr1-191085522-14	108.296986366721	0.077697384517966	0.199298343199236	0.389854643399083	0.696644034693174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.02620353439046	7.10276849451165
Merged-chr8-128595148-8	34.6085788086429	-0.375565276052159	0.358828588063637	-1.04664257125899	0.295264459728723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.81680141800459	5.4421602820485
Merged-chr15-36724656-2	2.58148272272883	0	1.47922729773342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48968113-1	2.56601753805751	0	1.45083965123473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115343803-4	6.31227212723016	0	1.36884920073302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17748783-1	3.85149319742893	0	1.3848513429158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45412908-1	2.38770301784861	-1.84047535556901	1.46162411998506	-1.25919881206381	0.207958530544379	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	0
Merged-chr12-103336839-2	4.54035744500679	0	1.38377992258658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12054325-1	2.25397657946592	0	1.53653670785924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7062765-1	2.62071517598218	0	1.42679109827854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64752334-1	1.52068495901726	0	1.49314666248627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139971609-3	7.7779721508897	0	1.4135543602593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68684135-2	2.80721442651847	0	1.54804496200933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83268416-4	8.81357574570877	0	1.35465581526656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9379352-1	1.78298817607697	0	1.70860686986528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9325469-1	2.04805753601054	0	1.51420311176804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73462482-1	3.14367093545626	0	1.40467143062541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122268195-2	6.22511640698231	0	1.38087361534257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80357147-2	5.63121946037602	2.50494501641944	1.20142622358483	2.08497614522276	0.0370714659342842	0.48406625431702	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.32514197764128
Merged-chr1-118525510-1	2.38349512668569	0	1.50394143438521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137566044-3	6.04407435795753	0	1.37970936144746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77373025-4	21.2571263936584	0	1.36421988801248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103550655-4	6.77705277445839	0	1.35021139232891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117545670-7	57.8560265109505	-0.579799746978744	0.301676822052751	-1.92192341139605	0.0546153955103084	0.626601579684435	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20530465194089	4.70626794294843
Merged-chr7-130812575-4	15.0214520920989	0	1.35692947568339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111546493-5	19.0667504150879	-1.11154499438388	0.769964183409627	-1.44363207839309	0.148842496514024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52467542378	1.28067447403188
Merged-chr2-19388930-4	9.49793150459855	0	1.378459146736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36214553-2	5.21351944069668	-0.687775163595488	0.915853278100534	-0.750966535842862	0.452672795539769	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	1.40024388691264
Merged-chr7-66309587-6	15.124848851847	0	1.34877879731192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53491033-2	12.1200290170921	0.467120370484494	0.962900252628297	0.48511813057423	0.627592551793143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	0.788686275880602
Merged-chr19-17125594-4	11.2691626472011	-0.371032129797155	0.629735714636303	-0.58918705287573	0.555735801387518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17198420640041	2.09590328610779
Merged-chr2-34779654-3	19.8806970720777	0	1.54432182294553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94590444-4	11.1837854571165	0	1.36392593187851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108874666-5	21.6634221456069	-1.74337105476195	0.420371735372978	-4.14721283107944	3.36547188057992e-05	0.00239142073145678	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9903521400658	3.03350771683336
Merged-chr3-145105161-2	6.87059076334505	0	1.40414724653784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47621713-2	4.24158911858198	0	1.41143932400283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75743834-1	3.9321879341887	0	1.41522277542292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99365351-4	10.4061937531551	0	1.35453247975171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136464155-21	103.331137820125	-0.527728022283204	0.24257011607926	-2.17556898934232	0.0295875042496719	0.419495864243066	C57BL6J_F1_Control-BALBCJ_F1_Control	6.9707742879424	6.45884063148996
Merged-chr2-117838591-8	45.825577127573	0.0499288796863083	0.320785527597314	0.155645674105924	0.87631232090998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44537204205401	4.43531480735292
Merged-chr11-29151768-8	25.1834827397368	-0.18511154278788	0.440558984449629	-0.420174254349009	0.674358161136799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35883337096404	4.18861265976953
Merged-chr11-110448651-5	13.6274490962191	0	1.35025603566007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129785408-4	8.81810164342358	0	1.34582108669062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61971446-8	32.3435467850185	0	1.34060689069571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50898188-2	7.25135437620546	0.308142716913088	0.562741798508027	0.547573892200746	0.583984520171312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78831328306335	3.39842229244606
Merged-chr8-85513447-4	12.7025842069004	-0.0382320734872954	0.667662906050287	-0.0572625394354555	0.954336060565618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15611580154736	3.12157574733125
Merged-chr4-150915479-4	10.9224224215087	0	1.35306508644461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-23038603-6	26.0122049111392	1.1262602041996	0.576412220381504	1.95391451529978	0.050711327659193	0.594739387319541	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42139546294927	3.43132429706353
Merged-chr4-129497258-4	10.6170580020529	0	1.37341039608902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83058949-2	5.5610726082581	0	1.37420060802662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-143483065-4	29.13123039955	0	1.37336713648551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16870980-7	22.4842967169436	0.297578514877775	0.433082536659813	0.687117326809978	0.492008796323049	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06258307901009	4.31418816947947
Merged-chr12-35067909-5	12.5419095703589	0.517793144088049	0.638444825995059	0.811022539466952	0.417352727080901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61076849167644	2.41909817362724
Merged-chr1-65473329-3	5.27103482045104	0	1.38682075713205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-25849010-6	14.183134510749	-0.109890655005504	0.54304651860206	-0.202359560813299	0.839635640159172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69312120352535	3.24101879244321
Merged-chr10-60245235-4	8.24131854152744	0	1.35607981540263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-64935050-4	19.4203744561958	3.79883755608441	0.659744046574805	5.75804749706623	8.50924152849301e-09	2.01988585260852e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	5.21112917215176
Merged-chr4-88432664-8	40.2687503691363	0.0933686900398506	0.302209992091047	0.30895302102295	0.757357263429491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22133616423784	5.26111007744478
Merged-chr16-64907654-4	10.676931703223	0	1.36698733179387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184048864-4	7.93218110220944	0	1.3569398763167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-47318944-1	2.29744185354663	0	1.44288562861266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55754476-1	4.3829315430833	-2.49832602093331	0.931318356102724	-2.68256928961223	0.00730590155496191	0.16124299741217	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34800470532829	0.953310774576147
Merged-chr18-53261439-3	7.92405973197882	0	1.36036138406406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60594433-2	5.99582427696661	0	1.36451509817314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4722678-2	7.90273238955555	0	1.35730345053994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16018420-11	37.8470041351402	0.356406819948808	0.341410415082962	1.04392486052952	0.296520155143967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63884975721527	4.89708662690872
Merged-chr19-32651219-2	5.33320273817105	0	1.41692961851368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102849984-2	6.40555565623376	-0.311414755021522	0.78880498156518	-0.394793088658746	0.692995595942458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27624770054806	2.46652732427062
Merged-chr9-83563859-1	6.02861483930888	0.527358592192681	1.26107625423093	0.418181367243563	0.675814517808361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.67591700901439
Merged-chr2-166188211-4	8.79362100895651	0	1.34278393624769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138253658-4	8.7418463006863	0	1.35567813356859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124146502-4	7.93244127670471	0	1.36557919537662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48275605-7	28.0632681853203	1.05415105568227	0.432160573390669	2.43925781431553	0.0147174640759566	0.263460932552523	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70921975210724	5.88070924216351
Merged-chr11-69245886-2	5.13133789225793	0	1.38159715117646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18965066-3	7.52180492220496	0	1.36845091474371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116987423-6	30.7237065066955	1.08424989799946	0.349663236065241	3.10084042634998	0.00192972253220799	0.0606887881963539	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83255535913729	5.01804634905957
Merged-chr1-125468114-4	12.1715868268292	0	1.3575190368537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118981235-4	16.7770601249453	2.99817153574482	1.09791370882573	2.73078978032936	0.0063182759630662	0.144795599947857	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.85449916425446
Merged-chr2-117378430-4	12.9056680318638	-0.740179698665945	0.545698612442392	-1.35638918954386	0.174975371036201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.864412046269	3.14342505152549
Merged-chr4-95084156-3	6.4598254314732	0	1.35706754009241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138730983-10	69.2799422016902	-0.131447731332513	0.285221442844932	-0.460862023631155	0.644897599412876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.33701729799373	6.19600240441233
Merged-chr6-58661172-4	7.91182534469777	0	1.36395736903988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11557861-4	11.192539595801	0	1.3615539068887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69392367-3	9.32460067197829	0	1.34494243333068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155696377-8	39.1008654683435	-0.542175292942003	0.394841851824889	-1.37314545161858	0.169707133557391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.09038280911592	5.41563035453076
Merged-chr16-70353205-4	10.8226324966548	1.25433817577371	0.95770978219556	1.30972680773723	0.190288271301576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.45451904642141
Merged-chr7-99053045-2	4.86108493191384	0	1.43779928405123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39258465-2	3.38284952176245	0	1.46143551950827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142078204-4	6.41514681646884	0	1.35852625800084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-29292988-4	12.3630074872791	0	1.35498967709987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88727487-4	11.4166752144929	0	1.34697800330273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119339504-3	6.24620504403895	0	1.37919000531051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129914269-4	14.0591799830225	-1.55909361109404	0.622276901793362	-2.50546598564214	0.012229016007652	0.231461379233968	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1052765490051	3.52380923837118
Merged-chr4-115835736-2	7.84235046701315	0.139220213011145	0.720901839821699	0.193119514087492	0.846865370290455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94767211644437	2.2881631765938
Merged-chr7-100446491-3	6.8643665989442	0	1.35847792847234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59578214-4	14.1238386480772	0	1.34301926155574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52094918-4	13.1665728766979	0	1.3562703400033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75187015-4	9.57093189055414	0	1.39037997132861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120741871-4	12.0007108528441	0	1.35887803389724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101335117-2	3.96361556073081	0	1.42319480611029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143465098-2	6.3327554217053	0	1.36070541547641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138683814-10	56.8565435097821	0.485902507210875	0.265060032615797	1.83317908179385	0.0667759436341716	0.711996830874551	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53703055539087	6.14384485834312
Merged-chr11-31732463-5	23.4902049509638	1.56416987712034	0.386811735393679	4.0437497986673	5.26030544222114e-05	0.00346180319048062	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88997049667035	5.37459182712407
Merged-chr4-74357745-3	7.02651002470602	0	1.3564495712579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77747197-3	8.52125260203794	0.614539563420776	0.813229548943817	0.755677857769568	0.449842362793778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.34890140941209
Merged-chr14-45608534-12	60.8320715074415	1.05278401729476	0.227415422239303	4.62934310667349	3.66827533830686e-06	0.000389460506084028	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19017583069749	6.31447145000739
Merged-chr18-77865586-8	29.0321390029939	-0.483123538232656	0.323000210878485	-1.49573753193124	0.134722065681398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84455434917277	4.34295913954547
Merged-chr16-18687573-4	8.6733839013686	0	1.35965336364607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128222123-2	13.3777518913963	-0.357770576379296	0.742080255144171	-0.482118441905975	0.629721809751709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51339913143748	2.2505070961916
Merged-chr16-94488546-3	5.91417635837607	0	1.37029560613903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97310130-4	11.7064359477444	0	1.34906159906427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60865154-4	9.54064364478302	0	1.36017168806736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45953742-1	3.51029083496798	0	1.4018903215341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40310087-1	3.84189496271006	0	1.41488924598235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99225421-4	11.9020317690675	0	1.36403281781215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99030743-4	8.03427170336606	0	1.35097663296359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91089246-3	7.61908403136794	0	1.36217900510335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62663997-3	8.34092211110935	0	1.34874132086589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16060021-8	36.674551412118	0.877611513722608	0.361562051877953	2.42727772221751	0.0152126055941583	0.269771869984982	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97486966832473	5.90537276096658
Merged-chr8-33471264-2	6.84067041360039	4.68325940544145	1.10643880362747	4.23273242956352	2.30869115571099e-05	0.00176014225151884	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.40793158534202
Merged-chr8-36184285-3	10.8264549245262	0	1.37857554822289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85458244-1	2.57619356526795	0	1.51774643172902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25398921-4	11.3266147695727	0.252145462825366	0.746329635047783	0.33784731435624	0.735478252369188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	1.59708520306594
Merged-chr9-40744393-6	25.9969139497595	-1.32493700440034	0.515069351004293	-2.57234681469001	0.0101011646440469	0.202915450438191	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76575881716268	2.28636004977218
Merged-chr3-65873257-7	48.4550746386476	-0.209965046900643	0.371194848958446	-0.565646445498354	0.571634147856461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02648175337096	3.90028878311743
Merged-chr7-19221506-6	43.6686503749762	-0.941069368225875	0.439871007260104	-2.13942122279817	0.0324015696623753	0.445147140006633	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53897306013436	3.57987464693855
Merged-chr16-33912179-2	4.06543284902807	0	1.38752238411117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-10868262-2	6.09312262021625	0	1.36739128435266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68822921-5	15.1969891053248	0.245668661486027	0.582092996675792	0.422043664653222	0.672993146453639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04789201217784	3.09802104544551
Merged-chr14-93655001-4	13.652691713617	-1.06677881644207	0.517843591150216	-2.06004058884378	0.039394660722015	0.501745985259006	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58600411541992	3.50941274634454
Merged-chr11-117958332-4	8.51466592177168	0	1.36143409403964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108061541-2	6.05232217926842	0	1.37550363449798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-59180577-4	5.99863225228953	0	1.35802945790688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35292133-8	55.6186258501368	0.0466103174816419	0.322956205362025	0.144323956956929	0.885244661431827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54692017480837	4.59657245998585
Merged-chr1-144307236-3	8.29079722427106	0	1.35607784521089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74463308-3	8.8807754437068	0	1.36554035340946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35079992-6	19.0073506522015	0.172045868712053	0.508340584551802	0.338446061440764	0.735027067880222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59675026298572	2.67015429457203
Merged-chr3-79181787-5	16.6776798565802	0.199195031081908	0.555534535916605	0.358564622365459	0.719920816417292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86881063209913	3.03248631275913
Merged-chr7-98803397-3	7.17093160394032	-0.942871112118208	1.15358085644601	-0.817342890920567	0.4137325021636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.465515277017237
Merged-chr2-26485905-4	7.43787938674676	0	1.35710247495512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156200009-5	20.9026631962173	1.01419527390281	0.415587950084471	2.44038662260701	0.0146715505192126	0.263211489991378	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90951769190909	4.67985412574001
Merged-chr15-36518003-4	6.24661482406385	0	1.370670909548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90040555-6	16.2063046970611	0.321741390669982	0.581647114066097	0.553155655532781	0.580156829030779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16263994285839	2.49279345794171
Merged-chr7-74695440-1	2.41734679977583	-1.92607307143792	1.45977996464677	-1.31942698083542	0.187026406597506	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr1-173459013-2	11.0166206229468	-3.89774369308852	1.09430281871753	-3.56185109497981	0.000368249234027486	0.0170799147717578	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84686254141174	0.41385117919798
Merged-chrX-13502473-2	5.37554104393644	0	1.35436071678608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93613795-2	5.78693366272493	3.72809905458545	0.936582303123938	3.9805354448301	6.87602106717598e-05	0.00427169861932136	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	4.29120716861809
Merged-chr2-119015984-6	58.3544963112156	1.00641876544935	0.385997943417866	2.60731639277114	0.00912549962596926	0.188730402862862	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92824195146549	4.45859286174333
Merged-chr8-106004819-2	8.45004667153051	0	1.37527692196485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102246479-2	3.22520935667845	-1.84965718354168	1.37278342481286	-1.34737727023025	0.177858757282825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr5-123827749-1	2.77392517781121	0	1.42006190480901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79384835-1	2.07916579057702	0	1.48138946986879	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107749717-3	7.13776036526106	0	1.39095147887488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71878140-1	1.74997582657653	0	1.4651772206983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16209055-4	30.622032553651	1.50549477775949	0.59021017644442	2.55077739734849	0.0107482951405687	0.210926561569015	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86829562625364	4.57620126135437
Merged-chr1-178350978-2	2.74219447034153	0	1.56833938865003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-62400350-2	2.53921756689116	0	1.4175834263013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-125023758-1	3.02677718484361	1.67518784060022	1.32597608028815	1.26336203609056	0.20645910104727	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.95685815637649	2.65279588665868
Merged-chr4-149790042-3	9.42188287263191	0	1.35324478901443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75883993-1	8.96668135373113	1.02411906654845	0.871501885358597	1.17511973726489	0.239946815310454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	2.75712259139583
Merged-chr19-50653872-1	2.41620495138447	-2.28603147077728	1.97758330970519	-1.15597227158944	0.247692499004266	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12622051207479	1.25298535761957
Merged-chr3-10419482-1	1.73971176090376	0	1.50762868212004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33281336-1	3.18343346570058	0	1.38324539867412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87700676-1	2.06545304697669	0	1.4432263132292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130248063-2	9.24626922624346	0	1.36517463945291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25024292-2	2.70382360389551	0	1.40760547364511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17939041-4	6.7382261977721	0	1.35991351524175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161353457-3	12.1876788623091	-0.299994386664609	0.740456110348386	-0.40514810057204	0.685368651480473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80018199085412	2.13869887539473
Merged-chr10-117952303-4	7.36248219736769	0	1.35765529714312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103893240-4	6.93386225577463	0	1.35504665842628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46894597-3	8.25440565338356	0	1.36194700790782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88107820-3	5.28491673812652	0	1.36548629975362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77801121-4	7.86662485664205	0	1.36909705089289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44449839-4	7.7395257415317	0	1.35551513266371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134543427-4	9.04202359030729	0.609813687309865	0.797631834724958	0.76453027670359	0.444551301122817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	2.04131615915676
Merged-chr4-59928573-8	29.6556690179822	0.696370570384842	0.377236553170673	1.8459785101201	0.0648953258048872	0.699664467676171	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23639157735085	4.92474623452743
Merged-chr11-94161408-7	29.4217187556372	-0.758657748787803	0.417999418957226	-1.81497321379156	0.0695280260040836	0.72906519397299	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10223162064375	3.05983858052419
Merged-chrX-166946137-4	9.69948982945627	0	1.36976662618085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78232421-4	9.57229352752231	0	1.35631930430784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128389284-3	5.39527139551116	0	1.36878444403153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45100890-4	8.20693396977318	0	1.36827096358476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112972459-4	8.31152193591844	0	1.35532877462479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105586905-2	5.40248676163492	0	1.38963141844685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100606177-3	6.35457008555811	0	1.36739018399174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97279688-8	47.6427659106495	0.290958006014056	0.284786400290267	1.02167099874678	0.306936641712108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11553078403371	5.28033426997326
Merged-chr7-128312532-4	7.56869151620468	0	1.36166640202945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117190166-8	37.6845123992774	0.417230371070955	0.448505566739817	0.930267987761666	0.352232348144914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21838166633376	4.66837342496185
Merged-chr16-57422314-10	55.8753553680073	0.555634229648075	0.297511612068297	1.86760518618185	0.0618171230120453	0.679263592037957	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83195672796075	5.334890211295
Merged-chr11-114906851-4	8.68205112610141	0	1.37483218477798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92879365-2	5.09599541497809	0	1.36270805193045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-169368973-4	9.72837623371928	0	1.38663587623667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64049892-3	8.67162531088368	0	1.34834336385721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50185775-3	4.177233692303	0	1.38811221663222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55121243-4	8.23334097421063	0	1.34920949778594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120451680-4	26.1347713806517	2.84119183454354	0.85545763973722	3.32125368056365	0.000896140446842422	0.0328921664752918	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	3.45062928436539
Merged-chr2-130930179-5	17.8567913884393	-1.65983734598769	0.522955199255313	-3.17395705856123	0.00150375936421473	0.0495411244117263	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43449173308115	2.25190293149645
Merged-chr14-106681391-5	30.3038409990396	0.999501211257956	0.765820033358342	1.30513850215547	0.191845690354087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.55809314683451
Merged-chr10-117363269-3	6.11340976914806	0	1.36108822049409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3526503-2	4.58583744682338	0	1.39882168940629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64266372-5	23.9697903559492	1.30783794605395	0.380199579962911	3.4398721486792	0.000581989043830525	0.0240397738857018	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2282424117323	5.49663432816025
Merged-chr6-127561746-3	10.1645102903451	0	1.34696866626245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32863421-3	6.5933107603537	0	1.39024961256519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23971223-4	11.7717645607724	0	1.35429604888475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113840618-3	6.39622687812041	0	1.35910652635915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19209897-4	8.26983861696497	0	1.38594787636094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31512663-4	8.3628362851015	0	1.34988630034675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-144931991-4	5.68387009412817	0	1.37342831535128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13644315-8	27.4412941771776	-0.424570724402521	0.516668153718773	-0.821747424041194	0.41122066225824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80405808141914	2.96227705878657
Merged-chr18-5807283-4	7.33736831420177	0	1.37671661053115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76409579-3	11.8455576314833	0	1.39104387979769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34348325-3	8.9839814785034	0	1.41936944730607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75738176-4	11.9810330130581	-0.0304154153870715	0.564589001898888	-0.053871781569912	0.95703731905254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2180769473006	3.0349604391081
Merged-chr17-64591903-3	7.32734660519383	0	1.37191853512965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31565847-3	4.82006209292309	0	1.38683599202566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80439961-1	3.72041748084856	0	1.44910991085559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82976829-3	13.9194355852169	0	1.38407435286243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77984830-4	6.80336022165777	0	1.3631700612483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135959840-3	18.6234205708223	3.37903840088443	1.05257215512497	3.21026770889949	0.0013261140332888	0.0450538954597163	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.92222718070722
Merged-chr2-124264526-1	3.17325486409802	0	1.44476945399564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95311188-3	10.2837862885838	0	1.35147796957801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37194873-2	8.34870309238616	0	1.36227270639053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142391272-5	12.9741856934317	-1.03351776414808	0.752473898070967	-1.37349317603918	0.169599081194177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8961882943025	1.30281892590853
Merged-chr7-79496193-4	7.75555036124654	0	1.35364040831108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97798295-2	9.26982085904345	-1.19033049982118	0.588973357011929	-2.02102605431959	0.0432770680786824	0.534051791983904	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74264136244867	2.1033593022161
Merged-chr17-28514037-4	15.2292057555107	0.240435007441109	0.590343976800073	0.407279513114326	0.683802707873286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94971837427636	2.55069154502018
Merged-chr6-82994608-8	59.9674464452304	0.0495982745838276	0.30404361257343	0.163128816172216	0.87041701165852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18559934778227	5.15127753659328
Merged-chr9-107278709-5	41.8844033531271	1.72118631236577	0.857275477753517	2.00774005209635	0.0446709221319265	0.547030109522278	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	2.55259742392686
Merged-chr12-16532575-4	13.7590059863088	-1.31284686464118	0.71308805248997	-1.8410725857164	0.065610922437243	0.704850619123733	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89947373244046	1.67681329176461
Merged-chr6-29268666-2	5.13829461943743	0	1.3784195263912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25704902-2	7.50870890090457	0	1.35701441524554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66079521-3	7.48375705854992	0	1.36467758450799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34769184-5	13.2794413214003	0	1.34147856826917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43578527-2	4.66214266697954	0	1.42029415995728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-28420910-2	4.20841667263081	0	1.41700190722559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112332606-2	10.4658017188419	-1.29613695175445	1.33629137392968	-0.969950848326483	0.332070992623514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr3-107110996-3	4.86798671363065	0	1.40526877671411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36531297-3	10.0131964915637	0	1.37302806367809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5882170-3	5.99179918236023	0	1.3878471538111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58980360-4	11.5557276372104	0	1.3453014657396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12840399-1	2.83153921113775	0	1.3978514248051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41417819-1	2.79455228716997	0	1.46126912596878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84762793-4	9.81370654113215	0	1.35896791889658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155592654-2	4.06295772119179	0	1.53082987139192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48453353-1	4.90354068590294	0	1.37478469631845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86007970-4	8.7589940586355	0	1.36064041495442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21006833-4	10.7947644461939	0	1.34808696112029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100446135-6	19.274010849255	0.609627944121149	0.612721611513525	0.994950941285171	0.319760125185618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95160684218358	3.03878193165035
Merged-chr8-83100262-5	15.3892411282967	-0.556237768260931	0.393515888393242	-1.41350777609539	0.157506476604611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34774996258801	4.73875799000163
Merged-chr17-14826898-4	14.5063128020106	0	1.34523125704659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58271531-4	6.96231023933743	0	1.43032749864391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46641619-2	9.95838640624418	0.541920774124222	0.574353708658063	0.9435314266367	0.345409148527578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92523029995512	3.56793228002502
Merged-chr5-123886595-7	29.9874831798003	0.182454179405643	0.413399406026483	0.441350850402418	0.658959018219673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29437849435346	5.46829365204685
Merged-chr5-66112319-5	68.0800279740386	0.0179117470138184	0.452780714166011	0.0395594301025177	0.968444372190412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90762449428888	3.12221541370148
Merged-chr2-157138329-7	17.4907151045178	0	1.34088029086507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28402349-4	6.74067710164853	0	1.36166189316777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76675584-4	11.7378556074141	0	1.36641650957208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70490403-3	7.60036165765272	0	1.35648927926077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-5099985-6	18.682931876167	-0.551457307799126	0.435590957930122	-1.26599806024346	0.205513776724725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16726546389045	3.72806605049508
Merged-chr3-32715347-4	6.88391260969015	0	1.36031169882826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8610703-2	5.63182262333312	0	1.37506789152629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52483676-4	9.97124249173433	0	1.36532435761794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118220862-2	5.60881280395873	0	1.36046426675268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95417320-3	6.4586581464343	0	1.39518374274329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174196554-1	3.48363558545127	-0.671527535898708	1.57741070639711	-0.425715086866953	0.670315467291122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr10-68446066-1	3.90894458750678	0	1.42290213635788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37258728-3	5.90994919698761	0	1.42350540741548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100474104-3	7.91488502405081	0	1.42877170114933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57534522-4	8.58733631945841	0	1.35106148685692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66143462-4	9.68926432854577	0	1.34743192718122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97155290-8	23.5076095899399	-0.0679158773360728	0.364768722271934	-0.18618887308392	0.852296649386638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91899261393929	4.72946031726561
Merged-chr5-75874669-4	17.1054975074995	-1.39971985161883	0.534161859314046	-2.62040396035821	0.00878256639074582	0.184390231031534	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56952834697096	2.70999658019373
Merged-chr16-90885570-2	6.35952852717893	0	1.36723514828888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65155019-3	5.2958654378531	0	1.42559089369546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30622525-3	8.56676905964581	0	1.37806253578724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60657257-6	24.2811342075588	1.06168674632926	0.439878545317295	2.41359065503738	0.0157961977667405	0.275625284639118	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54063457163008	4.67176637407939
Merged-chr2-160569824-4	9.78826195363784	0	1.34779728167675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122604199-4	8.63106707948081	0.797690483485464	0.970586161386243	0.821864678501247	0.411153917718008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.4068548238317
Merged-chr15-73135157-2	4.79413895423924	0	1.37471657610014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30761460-7	26.8851520086633	-1.44365014483386	0.440497701581017	-3.27731595341444	0.00104799027562805	0.0371869937058407	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73925832459533	3.26093064865792
Merged-chr7-36720209-8	28.7565373638208	1.21086530282667	0.35828718505267	3.37959422871534	0.000725929181679206	0.0282064220063617	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46007254757092	5.7718517980754
Merged-chr4-42933887-3	4.01171846804321	0	1.37376921975463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108886840-7	25.103924402398	-0.222579518324761	0.387658341905135	-0.57416413956398	0.56585673349878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26509345455037	3.90823867247893
Merged-chr13-64378871-4	13.8204618928488	-2.06212522917247	0.610776283032317	-3.37623658033126	0.000734847018601488	0.028439059191233	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14060570286371	3.14703568255853
Merged-chr3-126746601-7	23.5815525601627	0.880483822592547	0.575559700266216	1.52978713100534	0.126069428030031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84926914477052	4.14678518209128
Merged-chr2-90589593-4	8.98524980327867	0	1.34860102909055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32814608-8	26.2542255422138	-0.129678958379121	0.350942584714756	-0.369516165969209	0.711743025765173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02939246954754	4.91842842350061
Merged-chr4-59177676-8	47.0361393828961	-0.103746503055952	0.36627382792491	-0.283248474628172	0.776986371761518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21223939906566	3.97339174283493
Merged-chr13-5871563-4	13.7646121774696	0	1.37100818480545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117312650-4	11.8606295890998	0	1.3501557449809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79864965-4	9.23921775326058	0	1.37769353696563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67173304-4	11.2649188957743	0.310631450574047	0.506506132471945	0.613282704116623	0.539689427647767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30717866661995	3.51147878120381
Merged-chr4-9658721-4	7.5173990606932	-0.218051006149292	0.922544087459226	-0.236358358493007	0.813154605924447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	1.18909650862134
Merged-chr14-9467993-6	21.5005142566771	-0.498642314728798	0.458893554899757	-1.08661869273306	0.277205360444857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69062047736421	3.08400547377001
Merged-chr17-34293039-7	35.6098094874938	-0.139508782813873	0.418547002220812	-0.333316884540182	0.738895095394865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.765800865367	5.58985531594113
Merged-chr11-101463041-5	25.8253636033262	0.687139318293791	0.459340162629277	1.49592692779265	0.134672698248747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56895856700354	4.32453843168563
Merged-chr11-71850612-2	5.20032162184913	0	1.40618222680427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49762880-4	11.3187776722143	0	1.34557745068511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40642885-11	58.1103371717331	-0.0300575764007338	0.318360000949723	-0.0944137966800692	0.92478045659539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69090060036634	4.72985883689151
Merged-chr12-98832614-3	8.52998183798395	0	1.38566776423295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73962947-3	6.67768838794606	0	1.35307899137099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62217867-3	12.9281452983704	0	1.36808282317976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150473729-3	9.42056956856602	0	1.35137820515934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108445442-4	9.59492387033793	0	1.36347481403845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54398068-9	33.1690485216288	-0.0515734370190124	0.336787187006926	-0.153133607835122	0.87829291320726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07048342204593	5.18682308046361
Merged-chr2-153092882-5	15.0308571152938	-0.410699807433342	1.05160002344274	-0.390547544958005	0.696131705116737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	0.577068348605183
Merged-chr10-118611230-8	25.8602624138495	-0.100643209811336	0.464871770369165	-0.216496712053333	0.828600587794792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95668910425934	4.04886238848356
Merged-chr13-69493214-8	23.3501509866968	-0.61813295331541	0.39199687833159	-1.57688233627343	0.114822601617767	0.990108153765891	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81859871422171	4.23477434767746
Merged-chr19-16200452-1	2.12660449718591	0	1.43391801775269	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67792160-1	2.89316919646328	-0.0350715963874052	1.49722118471024	-0.0234244590883161	0.981311694825867	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr10-122854350-1	1.67553722718717	0	1.69312885007989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126227208-4	7.36285644988	0	1.35645628162443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58687825-2	4.99090821383741	0	1.36946808625414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32396326-1	2.63281801428624	0	1.4300404198225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70430359-1	2.80542137225744	0.546789822539091	1.16446248660962	0.469564136953087	0.638666452091095	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	2.07868171859496
Merged-chr15-58732177-4	10.9278736783722	0	1.34461555219023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138290315-1	2.44655753743662	0	1.41646371621881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116164179-3	9.52874068525101	0	1.38054207708814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145089422-6	24.4187593472125	0.459459433399455	0.469215366383312	0.97920798489816	0.327477224065563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38291866868993	3.71238625515903
Merged-chr2-33978673-4	13.4760490476893	0	1.35904520589848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66495876-5	8.8824927010344	0	1.35538977881329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115513377-7	48.5239460179932	-1.21960270791327	0.253332580680723	-4.81423551852711	1.4776445790209e-06	0.000176923527909685	C57BL6J_F1_Control-BALBCJ_F1_Control	6.97816459352982	5.77207250955625
Merged-chr10-58529986-4	17.6795124725271	0	1.34891820123952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166289418-8	41.7163332092143	-1.01358577937394	0.30309124160971	-3.34416057023229	0.00082531954247562	0.0309407648249327	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04152414140866	4.93182922694918
Merged-chr19-56689395-2	3.1642063497095	0	1.41673495965093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70971633-7	30.2933284479624	-1.59413015958837	0.441103194215606	-3.61396194925122	0.000301553336716619	0.0146882955471135	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85858467103852	3.31395763309873
Merged-chr7-142340738-8	35.8607748585528	0.289791768646537	0.29530568273433	0.981328113848885	0.326430963094997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85446675981166	5.20737657481047
Merged-chr7-90040654-8	30.9253998284688	-0.405558868740821	0.372974717331917	-1.08736289591422	0.276876462255318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34697941904713	4.61864666394241
Merged-chr5-64392662-7	22.9989147661814	0.208292388729173	0.453169979427109	0.459634128881383	0.64577885777972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49119246409297	4.91198744708631
Merged-chr6-142339181-4	10.7353974091145	0	1.35381169394892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-26991209-4	10.1223825834523	0	1.3655861471458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102973059-7	16.7370645561941	0	1.34459438500796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50522777-4	8.0854832325416	0	1.36451878197766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12264914-4	8.27729997969274	0	1.37661397907923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107657844-1	5.00373074017929	-0.560247496224059	1.10600188238817	-0.506552027754533	0.612469175467474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9272926343824	1.32514197764128
Merged-chr10-99203399-4	7.96446163082759	0	1.35664055480313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-16912407-4	11.1672010447593	0	1.35006808947047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107277671-4	11.8901934044724	0	1.36115189704963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19818604-4	8.57090183320694	0	1.35939791636937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56622414-5	17.3111601148054	0.891257679583662	0.540483690736349	1.64900013609925	0.099147606829954	0.906627242415293	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79590200375307	3.501248254898
Merged-chr2-27691311-2	7.69942919472592	0	1.37365065666227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108901427-5	24.052896777984	-1.20039450185107	0.514197646812433	-2.33450018546846	0.019569546366302	0.315450082012362	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87022410157085	2.60203569569708
Merged-chr15-59721774-8	35.5016388020165	-1.15134727813422	0.328568492501338	-3.50413172416259	0.00045809870150021	0.0201724950190478	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21526378331516	4.01621611330916
Merged-chr3-152782234-3	15.8389311369255	0	1.34748705405368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119835743-3	14.9156140723044	0	1.35773652112801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33885997-4	12.0760257149631	0	1.35815016578441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32271481-4	11.1324329445871	-1.30392265480335	0.756422215533611	-1.72380269646564	0.0847434676787085	0.821563111383319	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7836076971318	1.41437199749648
Merged-chr5-129002708-12	74.513652566228	0.0212494170989343	0.298930424954489	0.0710848255147313	0.943330245102141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.47764156455688	6.51043391593877
Merged-chr16-57215701-4	9.23376408440329	-0.276277768180602	0.842322293660892	-0.327995317540328	0.742915203027875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	1.46573328458049
Merged-chrX-85803167-4	8.70542107118944	-0.839307877358223	0.83472048020048	-1.00549572853016	0.314658205247316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96617270997603	1.18984215491549
Merged-chr17-23706912-8	36.7665023187192	-0.0871523241397237	0.373746080085773	-0.233185921628188	0.815617037462542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.216385676588	5.04001496036982
Merged-chr3-30860921-3	5.13865066988473	0	1.4045173720562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167102227-4	7.48061354588006	0	1.35641159477835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85973741-4	14.4805557031723	0	1.36737649825703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34806918-3	10.4384228452532	0.179854707237627	0.983631634100261	0.182847624052008	0.854917579879668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.36232305499238
Merged-chr16-4370273-4	12.805870806011	0	1.3587418311447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101811946-2	4.29730084130594	0	1.37679686995849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41364675-4	10.4817943412515	0	1.36531347032979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113592904-4	8.62290963925269	0	1.35278293153685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31177364-2	8.06131160303384	0.560082401918075	0.767572534382782	0.729680097749259	0.465585749225255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83149254898828	2.38680974732812
Merged-chr15-103361512-3	10.9677997544458	0	1.35817558872142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52624855-3	9.12903182994832	0	1.35386209916162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76408389-4	8.81890757313795	0	1.36446930069346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102665376-4	8.6021169217054	0	1.34983819193663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30182924-4	9.01450416556351	0	1.37762422117457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5741088-2	4.928847326778	0	1.37470262968233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28487087-4	7.16316756985241	0	1.37341963447807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113478657-5	17.7898813015072	-0.358750131464202	0.563285586134092	-0.63688853451116	0.524197451566361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18441582918233	4.91738889536319
Merged-chr10-127591261-8	89.1213533596861	-0.444859200933796	0.312086293751901	-1.42543652137266	0.154031057313983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13697814005469	4.62656137938685
Merged-chr14-31458683-4	7.92297649267271	0	1.35945420199079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61584941-5	42.2571868455049	0.117047998330881	0.369190931585311	0.317039201987642	0.75121385653005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07109076830365	4.14732243928261
Merged-chr3-103728075-6	27.1988033477329	-0.313108484843691	0.527011031208644	-0.594121311133867	0.552430978073196	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26960627709772	2.6207713956291
Merged-chr10-122753666-2	6.36168187405181	0	1.39351806260556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21507709-2	9.74453866840636	0.580683215665508	1.38932933006847	0.417959372985304	0.675976821423114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0.921168194051549
Merged-chr18-25461322-4	7.81328110158245	0	1.36796317857059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97186020-2	3.70067115237753	0	1.41207767310879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37504055-2	2.23779272980031	0	1.54606442770279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8003986-1	2.62788832649778	0	1.4766040894009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18694058-4	13.0572128451189	0	1.35664002064862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120457949-2	3.63183457384352	0	1.41916874133843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81247713-2	3.01993108588992	0	1.52305825339931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143037524-3	7.58262093159365	2.06279237303278	1.15377034785439	1.78787085044164	0.0737968467647089	0.756748310372159	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.94927122251658
Merged-chr5-105685071-3	6.66032904059333	0	1.36766385377567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58636744-7	26.4172323955551	-0.613505399854322	0.359487500518942	-1.70661121448921	0.0878943393570508	0.839928153839663	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39109641589301	4.85687517068973
Merged-chr12-32008910-3	12.6763151366103	1.9007447785088	0.693882723525903	2.7392882313748	0.00615723670678917	0.142851570697547	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68388394484514	4.20226652407869
Merged-chr2-12053910-4	9.06712011879555	0	1.36363310273671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99158667-4	14.910013548711	0.911661598894233	0.745760038033625	1.22245970875303	0.221533831562024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61477032079243	2.1881845164991
Merged-chr12-98375547-7	38.3594781675418	0	1.33466684469104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53117788-4	6.81988194540231	0	1.35707982988918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55907218-4	11.6153092966636	0	1.3574059113646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102517843-4	9.65065153928395	1.88187273692441	0.931815587465079	2.01957636493705	0.0434273488002104	0.535541572919836	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.70089346712193
Merged-chrX-106628721-4	6.3541359199059	0	1.35908770042862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121643608-5	15.5785965715678	0	1.36061107087221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97765456-5	20.5830103423056	-0.0634159812390493	0.582088445356006	-0.10894561083456	0.913245629707686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67448605245977	1.75847184294284
Merged-chr5-24876755-3	8.78404805334916	0	1.35395756423843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31146000-5	17.143425083872	0	1.33963879383909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141535451-6	20.3536624865361	-0.609307207304692	0.553820654157346	-1.10018866709074	0.271249927349717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28147298570228	2.37780912716683
Merged-chr12-91008946-3	6.56789705796979	0	1.37273489500659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70307237-5	17.310296734706	1.12334542339263	0.532942379751869	2.10781777931723	0.0350467543522843	0.469044348939058	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96507172361198	4.67858012100154
Merged-chr2-165914515-8	26.5717315288892	-0.544591929615532	0.373421559220497	-1.45838373861527	0.14473480034375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85549126027412	4.1943633318531
Merged-chr1-45860612-4	8.04952367111996	0	1.35275632320161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112950415-4	8.17166259422743	0	1.34978985554874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24490668-2	4.39773445281454	0	1.40298842212317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34046572-4	6.57970290502536	0	1.36193538858689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107124618-4	9.09373989955282	0	1.34861661318548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27745013-1	3.55547595418553	0	1.42081244631391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107248830-1	1.8903032778073	0	1.58750637094593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73463929-6	15.4450111900494	0	1.36371494733752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36754483-1	2.24200643701035	0	1.42197593489622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27412892-6	19.79566968161	0.250958434859386	0.483718069539731	0.518811371049626	0.603892287559971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58018435977799	3.11959670913879
Merged-chr1-91955098-8	42.3672735401307	0.183818531942066	0.357760459335197	0.513803376381069	0.607389467100485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17755023208366	4.52922770582716
Merged-chr9-40974220-4	7.6739444025331	0	1.38543024576015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35125472-4	53.395195739076	1.24885350364011	0.41796111645681	2.98796575678389	0.00280841018478401	0.0805181272334777	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75144977038765	4.95690484516186
Merged-chr16-45288633-2	11.1581395131893	1.12198188542679	0.828744621882137	1.35383308175043	0.175789636770278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51348424539579	2.33839987844426
Merged-chr12-40218578-2	7.54680497831503	0	1.38873778133848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7114104-4	9.16984483287495	0	1.35596084609198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45718809-4	10.9667787268155	-0.902619743494642	1.14482546500459	-0.788434369330718	0.430442673782135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.465515277017237
Merged-chr4-32239438-4	17.5658985741428	0	1.3551563158333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117842026-1	4.32982669388542	-1.1919112781671	1.29395572302345	-0.921137606920652	0.356978588131275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.303163067301871
Merged-chr10-118407038-4	13.6474317937699	0	1.35547851887372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26229942-8	24.218348803429	-0.205206642611688	0.398566825011367	-0.514861322454108	0.606649930059087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87669520013086	4.88977214028022
Merged-chr15-99396254-6	27.8398720076617	-1.22309414375432	0.411831146667959	-2.9698922814608	0.00297904188813616	0.0844745633788178	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52086090968474	4.20416534907851
Merged-chr6-82769932-4	7.28811991309603	0	1.36228214521224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67278627-3	6.55827861110542	0	1.35995665191559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110854983-3	8.05659689548808	0	1.35919549541945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23438087-4	10.4686350264049	0	1.35582625391532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74671621-5	33.7418912277746	-3.25028842112069	0.465522429163374	-6.98202324421195	2.90958973165754e-12	1.4920980021054e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96732845744514	2.39064488842324
Merged-chr12-104342591-2	10.1918982313928	-1.05466878741946	0.710802954335568	-1.48377096772948	0.13786969163946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21600432583864	2.2492526918421
Merged-chr8-80943926-6	14.8587008580057	-0.648717703449033	0.608792126732796	-1.06558162460232	0.286612809380816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57732336166398	3.08717075118912
Merged-chr19-26845469-8	23.9410427935008	-0.3702990407849	0.323463063058402	-1.14479544367031	0.252293903214077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75714127724619	4.41428099593345
Merged-chr9-107744213-8	60.1020188145199	-0.669253130101441	0.377107598186557	-1.77470073082526	0.0759473145991245	0.769509799495584	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95644294787192	4.03107079875466
Merged-chr8-126665798-9	28.63169125249	0.295836062295004	0.360573909323522	0.820458870277181	0.41195456696358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27616221552065	4.4742961535251
Merged-chr1-12983332-4	7.70996256546117	0	1.36270330261319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173784588-7	35.8051479539386	2.94732187204243	0.72952986888209	4.0400290622217	5.34445784662124e-05	0.00350023354318655	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	4.0366123199682
Merged-chr4-129895043-3	12.18296668118	3.19125480164282	1.0712814961612	2.97891339771878	0.00289272524009977	0.082613259347776	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.64277485584073
Merged-chr17-33815584-3	18.3297820889484	-2.10769712076476	0.570583564644146	-3.6939324077434	0.000220812519916857	0.0112389024065173	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11777048856905	3.14698198213049
Merged-chr12-52396552-3	12.0965448562834	0	1.38883138443593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79753229-8	24.0834585052871	-0.052234174492907	0.322201740526558	-0.162116363516669	0.871214220429367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07378073083163	5.08297682019456
Merged-chr2-80168318-4	9.62710218013995	0	1.37739012475527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35889482-7	44.3437812549242	-0.626307694732233	0.423864151404124	-1.47761421355753	0.13951106773927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96225629388565	2.16539793868572
Merged-chr13-48549777-4	7.20226277795942	0	1.35427291795058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-162976030-8	30.7874679557178	-0.511482541971868	0.452885890593491	-1.1293850230167	0.258735448053671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27387373036222	3.72386496381724
Merged-chr5-3362212-4	7.67401410851029	0	1.36680092589753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64281198-8	19.199078033752	0.147911475585368	0.491620840095358	0.300864942089676	0.763517484546483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0089861303396	4.5592601546277
Merged-chr3-152884176-3	8.4119877831842	-2.75597734216447	1.14028640526045	-2.41691677586473	0.0156525954761591	0.274178522130785	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84532766974248	0
Merged-chr6-81618202-4	8.10715970274072	0	1.36264193622914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25527151-1	1.83675046942725	0	1.4388016040493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63174335-2	2.968761373679	0	1.42618312575096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-11718996-3	4.46752330377451	0	1.37859366193848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8351473-4	7.88933848793144	0	1.35621247663351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75033707-2	3.72037614554471	0	1.47818136522482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128532136-2	3.63563370891178	0	1.48622094525807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-117635842-1	2.0083889881904	0	1.44764585333969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74990977-2	5.08155832783373	0	1.43082359502101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4123386-2	6.12706536713504	0	1.36863739916534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132206087-2	2.30183047955026	0	1.58215134850578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84163939-4	6.58719116555235	0	1.35141825740128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135471966-1	2.30947937055121	0	1.45713336902863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7940974-1	2.10480403984213	0	1.43262841841915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6475477-2	5.43348478476147	0	1.36869340572208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37544086-1	3.40762017444122	0	1.39155032002441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127003377-1	3.6111817174967	-0.0336794480764408	1.08690113540838	-0.0309866711693023	0.975280169435529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.14143228603163
Merged-chr6-124689225-2	3.222333536471	0	1.52612503917403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137609432-1	4.96876976399058	-0.131918023811961	0.846192798004598	-0.155895942535834	0.876115043594053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04585323093051	1.97489399129634
Merged-chr7-59322943-2	3.6908719956465	-0.960748454149909	1.22805167120724	-0.782335529257855	0.434017411812804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29835464915396	0.679405493272835
Merged-chr3-84946527-2	3.815420850031	0	1.47707249972293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83711113-1	3.53626093420324	-1.14272984116385	0.966125614781724	-1.18279634002047	0.236889871457141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24201743577533	1.28051966905443
Merged-chr5-62846469-3	7.62548176849241	-4.07695463655856	1.20310147338892	-3.3887038846977	0.00070223800713302	0.0277005222521421	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80892243728474	0
Merged-chr4-13192337-4	8.79697686801538	-0.034088795370534	1.28659460907566	-0.0264953662405167	0.978862229507567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr17-80497357-4	7.96532233106505	0	1.36784541304951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146059569-4	7.49715532146502	0	1.38664051821515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120544941-4	8.14968073509658	0	1.37803792687523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155184264-5	18.9984216478162	-1.19625291169963	0.432640713272217	-2.76500309610702	0.00569222555295353	0.135816817910921	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4484770988474	3.27146573214884
Merged-chr14-75829797-5	9.98007805998308	0	1.34880844315588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44491116-8	28.8127398012518	0.607272038656891	0.323374814080129	1.87792002411918	0.0603921066302168	0.6694238426411	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85133098849596	5.42526529188934
Merged-chr11-68521557-4	8.39387152435024	0	1.3520854786018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88607023-7	33.9323338802882	-0.457559434241908	0.358729331761347	-1.2755004783002	0.202132154960714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37216609806	4.89287200600747
Merged-chr6-117816464-3	8.54643218856625	0	1.37046199344095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126755889-6	20.5464949092354	-0.0370565241356121	0.505164641500161	-0.0733553402026857	0.941523355158724	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19611497719938	3.32463446129248
Merged-chr14-14684918-6	16.8157997093544	-0.39207268571446	0.442052198958168	-0.886937530541641	0.375112534219616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77589999173672	3.43000939303005
Merged-chr8-82372988-5	15.1989105307785	1.52934626919968	0.82530525763557	1.85306740148625	0.0638726985084913	0.693295855544748	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	2.82384792558122
Merged-chrX-36088816-5	19.0244098809764	0	1.35166600482815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64306227-5	11.9963542697671	1.73692797936971	1.2624401944543	1.37584971311889	0.168868166654396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr13-20428816-4	20.9835003936092	-1.12955463220595	0.477970382771031	-2.36323143215979	0.0181163522452365	0.300148366869495	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72203695253569	3.46497134643469
Merged-chr17-50729758-4	10.2502805264123	0	1.3499896747602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135477111-4	7.27872819544648	0	1.35851538362768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62642687-4	9.0226722038936	0	1.37204405911098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70873677-6	20.7739147896513	-0.699614587396671	0.421360287001009	-1.66037144215965	0.0968397515317833	0.892671099171053	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00025966602215	4.22768563803363
Merged-chr11-43632720-8	34.6984762057342	-0.818648257160609	0.278678975510368	-2.9376032248624	0.00330760039447904	0.0919682096386118	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76929313776595	4.97654091405119
Merged-chr17-15803623-3	9.73115007302561	-0.529863498971956	0.807582024722599	-0.656111060859683	0.511752668171181	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88169983067447	1.48914397899119
Merged-chr11-44373086-7	31.7040627385826	1.23776014353757	0.37428313587052	3.30701553159414	0.000942956636178074	0.0342248906673474	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35181598254482	5.16255150335427
Merged-chr14-73445737-9	41.457619121365	0	1.3365021433132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93689026-8	34.3548546166314	-0.117319587862813	0.306092267855846	-0.383281775409185	0.701510850531926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38038209590459	5.32311789052696
Merged-chr13-116951503-8	34.2330602332465	0.379179017605367	0.436320389797538	0.869038042850381	0.384826323034793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30182073654969	4.65211351907543
Merged-chr13-64408285-8	20.9078882153132	-0.289843417150481	0.485822627834244	-0.596603370334104	0.550772220517691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55135623780744	3.23164277330981
Merged-chr7-80766376-7	32.2962898089723	-0.61485386790882	0.507948709461193	-1.2104644749684	0.226100714489896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47069253198583	2.62582308765031
Merged-chr11-20915257-3	7.04267438571483	0	1.36264332621243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74662137-3	15.978315502941	0	1.37915597180185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-54053696-7	11.8527887123846	0	1.34711007382987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7931737-2	7.03621865509245	0	1.39606914807648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-152218657-4	8.46434284070112	0	1.4038122889622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143293854-2	3.51950977129278	0	1.40981804161171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108182969-2	4.5335398883342	0	1.37578572292385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88304653-2	7.25229147590952	0	1.36518619386892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74874579-2	6.1869133224224	0	1.39575385493755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66158729-2	5.53242270698375	0	1.36541394771968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104958305-9	80.8062001083762	0.222723059459689	0.366167157554813	0.608255150317104	0.543018261970519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7439700405452	4.08743969271358
Merged-chr1-155494580-4	7.30560440609036	0	1.36119905556632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49771215-3	7.62736620282102	0	1.37718793883862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47778559-9	40.0196098443251	0.881013399340989	0.318679096694439	2.76457856344979	0.00569963802108396	0.135816817910921	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48270198425402	5.35678194515733
Merged-chr1-13332776-4	7.13916887269361	0	1.36886765641408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-54040696-5	13.0923101101579	0	1.3543467767543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73972479-4	9.31773116340865	0	1.39257111531777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46607823-5	17.5830235402169	-0.288890612936557	0.633396738899291	-0.456097411297993	0.648319931622385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36818926292598	2.48202477741927
Merged-chr18-67504152-3	6.00288958404205	0	1.37381378713454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69437293-3	4.22310722347557	0	1.38566579230162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31112554-3	15.1580843476793	0	1.34848864678801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4047252-3	6.39136192684246	0	1.37339843710471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3430693-3	10.7181267465625	0	1.39024525974575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46852623-3	8.45053737596277	0	1.36548196966569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108570530-3	13.2536050110989	-1.39777779762149	0.866050856390474	-1.6139673407254	0.106534510479302	0.949041882810952	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1552264446993	1.08918047352118
Merged-chr2-33870496-3	4.52048952770259	0	1.41216871824046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54619096-2	6.44278112009961	0	1.3519930813577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87555207-4	9.84114400984955	0	1.34703468095949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17509357-3	15.9896004265959	-0.567253746527733	0.701285155988414	-0.808877446904216	0.418585642704336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93171244472175	1.72466273450451
Merged-chr14-66232624-6	16.6520895663926	0	1.34684420385826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120398435-4	7.07531128181934	0	1.35390664949364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85379444-2	6.66502583058721	0	1.40176585545347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88390280-4	7.2803149446084	0	1.38015063987501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84211659-2	7.85263462172855	0	1.37026070843371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67200450-2	5.50677646432353	0	1.36712503405949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20787203-4	13.0113032559793	0	1.36351923829437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10944142-4	10.1822802775431	0	1.3591220461907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44384651-6	16.4328093802039	-1.55690475208065	0.758668473983681	-2.05215427485146	0.0401546716534469	0.508448124018103	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93342099941049	1.43571405234885
Merged-chr1-52748401-6	12.9614063419813	-0.883370082848983	0.567175499047674	-1.55748984984757	0.11935422859395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49799764014767	2.37902766497761
Merged-chr5-100663110-7	47.820866568235	0.131873480626304	0.368746197757855	0.357626685856436	0.720622704963798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96610994239437	4.06377048509887
Merged-chr19-40999073-3	6.38444735782149	0	1.36568328905448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172431018-3	10.6948176512504	1.08148370180707	0.682555223669751	1.5844632995298	0.113088327018824	0.98121553776122	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35023356413849	2.83673351012139
Merged-chr13-85223380-6	29.9652735207302	-0.754664822090492	0.322761760157719	-2.33814818001278	0.0193795625992856	0.313264360070601	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42044361863123	4.70327330141631
Merged-chr2-181930866-2	10.6443792771204	0	1.42937440999347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70753746-4	9.79152387552065	0	1.35569619032924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88714951-4	8.90533432035883	0	1.34975653133383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37325730-6	16.288574847054	0.672048865823166	0.655099750418273	1.02587257191606	0.304951652721572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90763661962622	2.9220913379402
Merged-chr1-153500671-2	3.13178462920093	0	1.40544005120527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19722166-3	6.51438367442085	0	1.38160138300242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43371519-2	2.56374628220675	0	1.55013650395644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16082325-4	12.5682933433669	0	1.35547958959142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77946471-2	3.0819788508881	0	1.39174081832799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53542213-2	2.77570926304475	0	1.51461304261828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62504881-2	2.69978703611673	0	1.65152660322453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-25086411-2	4.39095861434899	0	1.44509600106173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86189277-4	9.03143888383969	0	1.37313632849829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70708152-2	4.74181436587694	0	1.37976638956667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12123059-2	5.36503545586449	0	1.36918989360808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105545193-3	11.3484139567036	0.588660175956233	0.621863498717818	0.946606734709394	0.34383921087928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54670624951218	2.71793069306592
Merged-chr12-108931300-2	4.23764786834102	0	1.41297086685109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11788744-7	29.5935814998759	2.01558430447179	0.864933791026932	2.33033363406776	0.0197885244190476	0.317873640335404	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.37618163600509
Merged-chrX-7563299-4	7.44161091959846	0	1.35913391746235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21400093-4	6.98612480603046	0	1.35729409356801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68843527-4	7.08149906790887	0	1.36104026950357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51553547-4	6.95294311462602	0	1.36096706654886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110798441-8	33.9906942959909	0.162387286140361	0.376856184562735	0.430899883807873	0.666541167952284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44750745489903	4.57550516952481
Merged-chr7-19028292-4	12.1678951505015	-0.630560599300567	0.684208378118446	-0.921591461704387	0.356741713828885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36584508251498	1.62518823153097
Merged-chr5-129914214-3	5.68081065542662	0	1.38270570855551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13525875-8	32.9121071506461	-0.804708735332882	0.414288610817136	-1.94238681518589	0.0520902902381735	0.606592992085877	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06272316169762	4.09659891115533
Merged-chr7-55957390-7	20.4070797306213	-0.286578584822045	0.484411457444653	-0.591601582534386	0.55411741390277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57224970769799	4.15858234344621
Merged-chr16-30465030-2	6.88645033157963	-1.85453506866963	1.27235455755875	-1.45756154025801	0.144961437032871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr1-171230706-11	48.803534194735	-0.718359137318189	0.441418204945293	-1.62738901402406	0.103654503292281	0.932410250614779	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86758447031344	4.14684631696133
Merged-chr2-102532326-2	8.55578643062145	1.47342059288981	0.771962937262551	1.90866753022456	0.0563049943527391	0.639908674058236	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81534621159246	2.76596473035689
Merged-chr14-73234725-2	6.16821977810989	0	1.3657111368383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-16256375-4	12.453901133013	0	1.37056660281548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35751095-4	14.5370005724721	-0.0123442487834163	0.75544778634106	-0.016340307042535	0.986962901457692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	2.06798974965677
Merged-chr7-19157629-3	5.86390805536344	0	1.36651581170004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94814847-1	3.08457473341814	0	1.38790584122059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89458761-2	6.25756010401833	0	1.39257576641622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59834961-1	5.11351914626222	-1.13951709062877	0.927170194643793	-1.22902687900419	0.219061728399525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75015004207908	1.38647389072186
Merged-chr13-48978033-3	7.68959466016733	0	1.35726283997662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96413906-3	6.83666757494367	0	1.42552546994238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102453725-12	107.709375898355	0.027884968094469	0.209608264367185	0.133033724498673	0.894166709243584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.76864002163867	6.7785373860094
Merged-chr14-75841925-3	6.43392994067382	0	1.35915079871995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78538511-3	10.2546738557286	-0.413475699641719	0.683993976287652	-0.60450196050825	0.54550996617069	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88261029748791	2.52537298537352
Merged-chr11-8634843-4	9.13423814959916	0	1.37415551825931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39415996-4	7.01038597749613	0	1.37259733913524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97772770-2	4.5920386622208	0	1.36811695124504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55039770-4	11.1925121143302	0	1.37211394784486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92335346-4	10.3495152550569	0	1.37125391938887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79153273-8	77.5544706859162	-0.0154612634759781	0.33924998124783	-0.0455748395891091	0.963649123427825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57647058910511	4.53136297541229
Merged-chr10-99085110-3	6.33963932740462	0	1.35032779463662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152568871-3	4.16587843143362	0	1.38620712109217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25474019-3	6.71406222066709	0	1.35474861669879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19941371-5	26.0554582585803	0.413354335813297	0.575644896175924	0.718071746243661	0.472713050043875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31447273151311	2.84005047720855
Merged-chr6-148609153-4	8.24141573180812	0	1.35317064882264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91029119-6	22.6859442080133	-2.44471778728035	0.721900432893338	-3.38650273069106	0.000707895720022063	0.0278440690627202	C57BL6J_F1_Control-BALBCJ_F1_Control	3.858551231825	1.58383754133375
Merged-chr16-84581688-3	12.0461354197396	1.52337338264789	0.900099068053619	1.69245079426873	0.0905600545095604	0.855232123852926	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.43169743284153
Merged-chr19-47508831-4	10.1607224625755	0	1.36655654314955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-49050140-5	16.1639944686111	-0.940939102613251	0.635716452813616	-1.48012387983471	0.138840189810401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6594252635118	1.87786674940178
Merged-chr17-47408467-8	39.0768029395928	0.23727203929614	0.324518134038832	0.731151866131918	0.464686396967962	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21719018422928	5.38571606584439
Merged-chr2-102887241-4	9.63730143737208	0	1.36152138969193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84556741-2	11.7919498938415	0.920651058490296	0.605686171584417	1.52001333641473	0.128507623840418	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	2.87823630446519
Merged-chr17-63493317-4	5.66143674981163	0	1.38645678074753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127271365-4	7.88425556612131	0	1.3702061844269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129545673-9	38.7999773284093	-0.649028445531432	0.32744445132357	-1.98210243877391	0.0474677766630151	0.569854432779337	C57BL6J_F1_Control-BALBCJ_F1_Control	5.56652824548924	4.90511422296889
Merged-chr12-100684773-4	8.00174884890012	0	1.37585606066238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17542635-6	26.3606322424987	-2.4771998379238	0.432146259678048	-5.73231812712977	9.9067238137492e-09	2.28186271098133e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52465816696631	3.18044528094856
Merged-chr18-67768557-8	24.4076036878235	-0.0530883299670481	0.321292014346691	-0.165233891900478	0.868759890009293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77109406891968	4.5651722557259
Merged-chr7-45339945-1	6.41012252001838	0	1.36370805816047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165653785-1	1.93620315970316	0	1.45643576812373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54620453-1	1.34102189926089	0	1.80098458656786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44698772-3	4.73396209589301	0	1.44785199486365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72169298-1	2.87786261031229	0	1.46151750718531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83640067-2	2.70120979469076	0	1.51045709609286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-16332-1	2.05851171459138	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67395894-1	7.94778331078918	-0.981617415337517	0.73024056314325	-1.34423841249278	0.178871303902732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.577155824073	3.34325988062395
Merged-chr14-96099795-1	3.85633751892801	-1.07343198645571	0.872863411985879	-1.22978231383707	0.218778632884474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83934070333818	3.05192279715927
Merged-chr4-32011332-1	2.85392635383963	0	1.40176686384826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5063663-1	1.74962958107173	0	1.53623254811383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53406044-4	14.6697615867674	0	1.38020357072625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55024379-1	6.03473545853951	-0.367393353460393	0.827456282825416	-0.444003340219859	0.657040168966724	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26657236696409	2.3532367523171
Merged-chr12-26436515-6	35.5259089212679	-3.5368731957562	0.514186511278619	-6.87858027811954	6.04519811386409e-12	2.98737203883217e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80703439447297	1.97604228267487
Merged-chr13-92668431-3	10.7277362482621	0	1.36210682911114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129811626-5	19.1057234300502	-0.408672814899133	0.587864067348943	-0.695182504931967	0.486940934863515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25628520254291	2.88258121143328
Merged-chr3-151739812-1	3.04725986497853	0	1.53064346717363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71865590-1	4.93840283205796	-0.26954357615855	0.836233105775177	-0.322330668682014	0.747202201682601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09470474372226	2.35836193412232
Merged-chr12-71864701-4	8.40882763341995	0	1.3520927033065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-14506647-1	2.97395253424629	0	1.40515900942585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37508164-4	7.47166860953764	0	1.34870916302955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85262358-2	11.2738113512566	1.8126385510598	0.705807065141315	2.56817853005889	0.0102234487988422	0.204455039164189	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19968205137681	5.01408478846698
Merged-chr18-62985440-4	9.25391088492247	0	1.35190004611965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37010276-7	22.4476562657792	0.0986266782392706	0.395709778980477	0.249239931581616	0.803175192873972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36640084140152	4.29869238297564
Merged-chr14-61689535-3	8.0404835153436	0	1.36795026409444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13684294-3	11.6413704783079	0	1.37258195691315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18760084-2	5.38783768914408	0	1.3891479806046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64510272-2	5.14121197712151	0	1.37811788055764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113445641-6	28.8743500151488	-1.43316013023097	0.373793578532302	-3.8340951063372	0.000126027376552081	0.00713616891874435	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63110736962259	4.29949011356898
Merged-chr2-101779208-9	39.2413129340483	0.466329731881705	0.379520230944141	1.22873484431016	0.21917123744725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29257392784299	4.64968638505917
Merged-chr10-93429713-6	17.6963737734533	-0.305677930956764	0.414098914601383	-0.738176122125347	0.460407430888535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0642810019875	4.68116954264213
Merged-chr11-99073964-3	8.25725647830941	0	1.34940836136769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60740588-8	25.4062920376214	-0.0382218322679983	0.35010102818155	-0.109173721844021	0.913064702635519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53123240457247	4.49386002552076
Merged-chr13-41601223-2	6.45270571461442	0	1.38044777146831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109357848-4	6.88978362464495	0	1.35736735724422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34725558-1	4.39237906303446	0	1.4207760915622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114784795-4	10.8453387511078	0	1.35709214454061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-94035252-6	28.8506284864818	0.985440931067703	0.556701547204327	1.77014225309134	0.0767034462825274	0.774428424307561	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69469308021391	3.51076029806031
Merged-chr4-133463350-4	23.000216240369	-1.83854310444367	0.470657819316863	-3.90632648388213	9.37098789086414e-05	0.00556718612851895	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45397633820078	3.45653052154279
Merged-chr6-146638640-7	19.1740599445546	1.93826431962342	0.542924690849273	3.57004268233129	0.000356923066358394	0.0166683685259243	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31653289104558	4.68868933074125
Merged-chr19-46607725-7	36.0370554496285	0.602243791146794	0.2517126946254	2.3925841008657	0.0167301933733006	0.286484577714668	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77879187255843	6.38000268905054
Merged-chr8-70001855-10	49.9849330214996	-0.669005055015892	0.29451772062088	-2.27152734173532	0.0231150737324941	0.355750932339934	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20690034019246	4.79394806285827
Merged-chr11-80136988-3	6.22910278259281	0	1.36654096155008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77291220-4	11.697461229149	0	1.34995120213217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107432341-4	8.16773978296116	0.311110794114605	1.09848590235973	0.283217830512242	0.777009860916058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	1.28091929990772
Merged-chr3-28171477-4	11.9709341583339	0	1.34298287465404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21919111-2	5.68218891450042	1.38081512020375	1.25835268448097	1.09731964435176	0.272501686439424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.662147012823607
Merged-chrX-155728588-4	11.049659177218	-2.29674965469923	0.800538203764587	-2.86900693046079	0.00411762776217857	0.107714209588193	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07971069047672	1.06633037676026
Merged-chr1-78507379-2	6.42589632752558	0.226629938752516	1.09220935396228	0.207496793476777	0.835621896618292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.18909650862134
Merged-chr15-98541140-5	13.4315326502777	0	1.35760404117782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101960007-3	8.94579418507332	0	1.38315494553136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146780144-4	9.14554140152361	1.77072112157571	1.24568296647044	1.42148618006147	0.155175468422755	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr13-41819667-4	8.0175093004864	0	1.35896841333156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20990873-6	26.7422290469549	0.28499046335386	0.471768874972894	0.604089159909572	0.545784366129367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56753769839837	3.53720248553853
Merged-chr6-122596802-8	34.1857457995407	-0.641519021468691	0.452970758748571	-1.41624819942246	0.15670284835422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53241156735701	3.38815259328639
Merged-chr2-6380079-4	13.9896036357753	0	1.38954173434605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34047078-10	64.58528657513	-0.133373843338194	0.309116838083995	-0.431467415896487	0.666128540035891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.30388209209467	5.16429361478832
Merged-chr7-89412317-1	4.83985691736905	-1.02956815497705	0.819938018705136	-1.2556658326479	0.209237151947958	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08251563949621	1.33443165855834
Merged-chr10-80323652-6	15.6489732407794	0	1.33807585758757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12842803-6	24.6868294507323	-0.975577282867851	0.525834833282737	-1.85529223459278	0.0635545065210013	0.690813721250772	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36476581316883	3.54563688904172
Merged-chr19-10709526-3	6.06275110939927	0	1.3590467832628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-98346463-1	4.92395437861251	0.565556123520699	1.51120296736208	0.374242332588798	0.708224031631003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.716426531808663
Merged-chr12-44283529-1	3.91816670034764	0	1.37190027581144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162509582-4	24.8456987767952	-0.0578183971605792	0.982090337310569	-0.0588727889523009	0.953053431717654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	1.06633037676026
Merged-chr11-67125692-1	3.89518733662227	0	1.44306646163854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38931945-4	8.77585059864681	0	1.35887745398196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-96087162-3	7.0282589960778	0	1.36840973035871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23887500-1	2.37301837194224	0	1.45769784208735	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35711784-7	21.4590658445229	0	1.34771355014634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92656414-3	5.33547851397023	0	1.37498533824128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67359778-4	6.09913839468688	0	1.37604239518991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30621923-2	4.11541561405699	0	1.50470908983208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67564458-6	24.3245881106155	0.637948652213668	0.735468197952355	0.867404809602652	0.385720247529841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85144754364776	2.22082744010265
Merged-chr13-37751723-4	7.53696827673018	0	1.34828091458595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128984775-4	9.32479125962077	0	1.36030708033781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47262184-4	8.39586826069638	0	1.35399190074991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83135649-2	11.6867301714631	-0.617650202898625	0.823467135151749	-0.750060538584584	0.453218244713664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19206322264949	1.81828307388421
Merged-chr2-119263065-5	16.7051015602015	0.252808090978897	0.872642368177519	0.289704121869395	0.772042602702588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.44790810950236
Merged-chr6-116694194-3	6.91981099648572	0	1.35952738386056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8848400-5	28.6336589332467	2.01120092286642	0.665486824625057	3.02214987351486	0.00250986247697926	0.0741890235922325	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57597341069752	3.48226872749535
Merged-chr5-107688009-4	7.07545594260576	0	1.3637312616403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155280622-4	7.48510365441711	0	1.35808583570847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31108078-4	10.0309148054496	0	1.36248062442788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71016124-4	12.2715212348223	1.38574224350996	1.12677769783404	1.22982753933959	0.218761693189014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.59184561974686
Merged-chr10-93594144-7	37.376066875073	1.49805551941412	0.312857079090086	4.78830628915627	1.68194807251144e-06	0.000195361143747114	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84592898031983	6.27384372367781
Merged-chr7-101618507-8	31.2133211201032	-0.0928202319563852	0.327469863163616	-0.283446638599561	0.776834481157209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8597601898036	4.7726577913102
Merged-chr1-164088088-4	9.88185351215214	0	1.36101546222378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64289418-4	6.84480787232873	0	1.34833250126897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68907869-4	7.75313279613876	0	1.3586898036602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125389730-2	2.31576726732033	0	1.49967539940025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144980231-3	6.53450892627508	0	1.40410559400339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126405262-4	7.38057278560003	0	1.36874746950476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35947087-3	4.89418029524017	0	1.39790124463187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31061360-2	6.53780132425755	0	1.35483889144082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111161524-1	2.54683695765312	0	1.42766679027343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85507184-3	4.61857625109467	0	1.4262439256252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28246838-2	3.28374778868519	0	1.40134463527453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121743369-4	10.7990835951549	0	1.35340377899642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59511647-6	28.9509794833406	2.74825365152019	0.562786288047583	4.88329888251973	1.04325552278765e-06	0.000132191904343156	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	4.71697941468339
Merged-chr3-107155783-5	28.9403888898422	-2.21979669906354	0.568303897969866	-3.90600294489137	9.38353684268832e-05	0.00556855545012767	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28420214190739	0.956353103033036
Merged-chr2-155402216-4	14.7725806483048	-1.12347498446576	0.584862787449401	-1.92092061347458	0.0547417165725152	0.627293094987922	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77281462953897	2.1033593022161
Merged-chr14-76732573-1	6.53202525550915	0.529095475412142	0.804905974792856	0.657338238231249	0.510963454599801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	2.43836150107974
Merged-chr14-20798953-4	7.48558119086574	0	1.34882067058858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43501979-6	24.6490446654962	0	1.33951044826965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41958847-4	10.5370240082058	0	1.36037086382832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-91284100-3	8.27871327300238	0	1.38424068140408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3141132-4	35.4729960673216	0	1.34578910093434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106258034-4	14.3450151751079	5.25046099547507	1.021567267131	5.13961357652016	2.75304045642319e-07	4.13404768427371e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.31607432580768
Merged-chr14-87044541-7	23.6278093472734	0.36018854963743	0.43649569786987	0.825182358944604	0.409268067272405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49055351335214	5.05584505966659
Merged-chr17-34312514-9	61.0103835989139	0.752038610487661	0.222143236387421	3.38537703293425	0.000710805487312046	0.0278778210301697	C57BL6J_F1_Control-BALBCJ_F1_Control	6.49800402205083	7.27384371204349
Merged-chr9-116084911-8	35.8965683935376	-0.486697486920374	0.37236993319127	-1.30702681268946	0.191203605408364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27544610918761	3.78880778770853
Merged-chr15-86203591-1	3.12547655319693	0	1.41732889572366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13207057-1	3.12372018359477	0	1.38974091377724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24735330-3	6.58210880599474	0	1.38583291640777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50402605-3	18.0794793578811	-0.461313332872406	0.708591443714944	-0.651028652637789	0.515027991074535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86961804807321	2.24148664120125
Merged-chr6-116487024-3	11.1598641042208	0	1.35890173765096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7050057-1	3.03980713686755	0	1.42907347288922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-14579680-6	31.7449255772024	2.48448933264868	0.956564214827864	2.5973053289431	0.00939583626277442	0.192444711156049	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	2.40089009312056
Merged-chr16-65470778-4	8.67824640222251	0	1.35249997100505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68204326-10	52.0271963619739	-2.10689093883092	0.364823129320287	-5.77510242499244	7.69062877329612e-09	1.84980039596285e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	6.82081159248656	4.62459855981136
Merged-chr19-29828746-4	6.70167627776598	0	1.35993558321184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8929987-4	8.68719352821926	0	1.34924710050062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181090346-4	8.58644645326384	0	1.3806011299853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40521331-8	36.6652678358032	0.0393602234906422	0.393196457909755	0.100103199555465	0.920262395215966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61694660545929	4.527659245016
Merged-chr17-73029799-5	21.7404480956939	-1.63713379476613	0.500256489307893	-3.2725888214486	0.00106567383007192	0.0377633401100911	C57BL6J_F1_Control-BALBCJ_F1_Control	5.71419212631932	3.33104826837843
Merged-chr12-24597134-2	7.81105382704925	-1.84966683121537	0.943586637039523	-1.96025119327532	0.0499664375786441	0.589436974899634	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16596752412581	0.577068348605183
Merged-chr19-55383499-3	5.11291952747818	0	1.41006823537774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54295999-5	13.9402606327461	0	1.35151794040327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70946805-5	17.6423458588129	0	1.33655370889551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40581999-10	203.635770951134	-0.143311055923487	0.135746470857274	-1.05572583226982	0.291093491635363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.76125294666825	7.60993375419723
Merged-chr13-103110019-2	10.3125761072787	0.0824832429523372	0.717812657214818	0.114909150909069	0.908517131767867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09197273807469	2.15763548802947
Merged-chr9-56207316-4	6.95103091643152	0	1.3910622534965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15262512-4	14.8561757796999	0	1.35036056007522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17595913-3	6.14625907264093	0	1.40021293217656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79619247-5	22.8389177760423	-2.71760630207611	1.12667298342553	-2.41206307602541	0.0158625370208955	0.276280567099923	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0
Merged-chr8-35540715-5	50.2372906905184	2.90390619937792	0.376276321436748	7.71748322692706	1.18649136470067e-14	1.19437933506969e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8138077918701	6.29869732727137
Merged-chr11-69401412-4	7.41199641077649	0	1.35434360132084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9917976-7	23.811082324471	-0.500526915399393	0.453940557402504	-1.10262656032204	0.270189371061253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42300931714834	3.64498235789865
Merged-chr8-104571235-4	10.200375747898	0	1.35089080308378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59717236-4	8.90749950510789	0	1.36361788003208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41331730-10	49.8959421040808	0.00380068097751169	0.269573852287916	0.0140988487765216	0.988751118908166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46087349373304	5.46893242013333
Merged-chr1-156442307-7	25.0327815994951	0.472711242950722	0.430624118488829	1.09773517704858	0.27232014449167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52908746205369	3.96992361913298
Merged-chr11-105363048-4	8.46351975186834	0	1.36892036364935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133169680-10	58.8941830021636	0.754062798651791	0.247596143954197	3.04553530846299	0.00232266505043967	0.0698328260380807	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42657225916001	6.21296147846079
Merged-chr6-146616756-6	47.5929735354967	-3.06547233293233	0.428494204428709	-7.15405786414166	8.42495252555347e-13	5.51773487152483e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	6.4203642136088	3.44906342121431
Merged-chr10-84286369-3	7.04618576411776	0	1.39769916485779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71980688-3	5.20238128348932	0	1.39088203082126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39761744-3	6.97577768383941	0	1.36626294207824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112217415-3	6.02515795397831	0	1.36021736285849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41136743-7	28.3305483212589	-0.920171298656699	0.393005188317488	-2.34137188518067	0.0192130187339715	0.31191447794633	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46299148810612	4.46083675681986
Merged-chrX-140504102-4	13.9498225434963	0	1.35412912042474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57559410-4	8.6012256680189	0	1.35661702510733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92722565-5	22.3649195485585	3.41853155404779	0.568177746052533	6.01665865620108	1.78053982492345e-09	4.83941821715069e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58180101474665	5.36329982443245
Merged-chr14-47352451-5	16.0249455300795	0.356849832159035	0.665289462960263	0.536382810831245	0.591694008724672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38327122822273	2.2590011421173
Merged-chr3-95667702-5	19.0026816181932	0.260423984657159	0.527880826498489	0.49333859383488	0.621773362963763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95933272142179	3.33048076118337
Merged-chr13-99028966-5	19.3951223846819	0	1.34935115816014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22855287-4	14.8787252953438	3.21999923209017	0.560560587714906	5.7442483518442	9.23301928809613e-09	2.17271729645722e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	5.3510446682936
Merged-chr10-82666677-9	25.0806802143997	0.556963781507276	0.442152329268892	1.25966492685502	0.207790262826034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71289823633432	5.04571576442313
Merged-chr17-26012315-4	7.38506163717487	0	1.36384859311886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146445043-8	36.9018138389608	0.282217814422885	0.358180069435075	0.787921602863055	0.43074256412592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38546657651129	4.64437384348455
Merged-chr6-99205367-4	8.07006802033814	0	1.35778574348163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85500631-4	7.99507745520001	0	1.36034628656887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116243887-4	8.24674977167544	0	1.37660260820948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19200051-1	2.96548954789877	0	1.4494191468111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96751091-3	4.29916069328725	0	1.40440125882832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17842582-2	5.0793646456387	0	1.368681067821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46795522-2	4.7289737929829	0	1.39785451678412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98062050-4	9.67806213094878	0	1.35089462016065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169973478-2	4.56784868565609	0	1.43398943899859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51220841-4	11.3599800027531	0	1.35529752719006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78382893-3	5.70208488138803	0	1.43458881173638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80156188-4	8.66703754823248	0	1.3592904023005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33791000-1	2.1163442955199	0	1.44983390723948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68196117-3	16.2801819243707	0	1.35315920730565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99381290-4	7.76093996156713	0	1.36307274766837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35799148-2	5.81815719593983	0	1.40314591644317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114335389-1	3.00694280309141	0	1.42004999178764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100667089-1	3.55966771348235	-1.33394008105673	1.35535724077702	-0.984198144167501	0.325018098112356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr19-34577264-1	3.78832053175419	0	1.55428332374788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135980994-3	7.89619865127101	0.842542671579904	0.866976566298861	0.971817122089855	0.331141536255551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.55668345273989
Merged-chr7-53806888-1	2.44003255767416	2.2568436778359	1.54671174327014	1.45912364579605	0.144531079172202	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.815004392037195
Merged-chr8-117342624-2	4.26488119935554	0	1.41435048753931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150860743-4	6.77209203557453	0	1.36373276509541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51305533-5	28.6379423147569	0	1.33875698433082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78046196-1	2.02076086668968	0	1.45436871222637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21568673-3	11.6399883941717	-3.70790710218666	0.816034285265498	-4.54381288769048	5.5245701423219e-06	0.000543056253827262	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3853381157776	1.67692428396529
Merged-chr19-55774953-8	28.7501092242626	-0.176676764644348	0.394259874823322	-0.448122611319553	0.654064710236931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32575526998763	4.06059299407399
Merged-chr8-122556240-6	36.1878535015825	0.972529302788452	0.588434070243796	1.65274132136081	0.0983835208461053	0.901403979382006	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97799227303783	3.29897710901805
Merged-chr2-181483658-7	42.75458939768	-0.981919683247274	0.451410395582086	-2.17522611986174	0.0296131757453044	0.419750357324381	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3385701666754	3.54452435087155
Merged-chr19-16122646-6	34.8120584214144	0.574249551905251	0.564206079377067	1.01780107108961	0.308772502921636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37850366884776	3.18716770297686
Merged-chr1-180265080-4	8.04426505762967	0	1.35838843814981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173451811-7	35.0184553681353	0.246635934803324	0.412473819683483	0.597943246416422	0.549877802444212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23504712461358	4.40040588003288
Merged-chr17-8144031-4	16.6153231526958	0	1.35349235336611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-118071548-4	8.51257179946038	0	1.36060059794992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103644444-3	6.97481777004084	0	1.38349700397662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62172892-4	8.5023190439124	0	1.36348241203702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31613948-4	8.71764321585817	0	1.34909550961576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90057846-9	32.8483942070566	-1.38682213007523	0.444657741974553	-3.11885299447816	0.00181556519954012	0.0578162323853551	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85436097790836	2.86590969782672
Merged-chr3-103872752-8	32.9202631290569	0.0322854521880728	0.319208068301856	0.101142343800478	0.919437464878107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86326812128839	4.92230810254311
Merged-chr6-121191794-4	10.7295654382574	0	1.35778608006593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91347604-2	5.10855648969694	0	1.39774843828459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59041790-4	8.39749378540535	0	1.36414859543549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145510875-3	5.60409426690192	0	1.38089751172183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166900985-3	7.45685185192009	0	1.36032611765251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154300729-3	6.32851556021884	0	1.35616496792552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122575368-13	72.5937807835594	0.338501171184972	0.288519179933702	1.17323628627655	0.240701064427102	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59072674999784	5.95358089800797
Merged-chr4-104697933-1	3.13340533605571	0	1.41014417603282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93689382-5	20.6487754327148	0	1.33907563011045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24636170-4	12.6375137156652	0	1.33979050812559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99132603-8	27.5574984427067	-0.0684598197315521	0.412014830801446	-0.166158629771615	0.868032115469552	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46693596608714	4.39359008221065
Merged-chr2-90567266-2	9.00253781683424	1.63640914379643	0.904819091748519	1.8085484255578	0.0705211871061773	0.73536566466616	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.28242002473277
Merged-chr14-17746672-2	4.06493384402225	0	1.39357449834113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114877155-4	9.63471876125224	0	1.35018615299759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99149248-2	4.49883655930091	0	1.37673834973647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168570130-1	2.42133927159737	0	1.48480289134566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67297205-5	15.3451069369003	0.594321986025258	0.55523705982668	1.07039322305103	0.284442348438114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41655596585847	3.60022131779742
Merged-chr12-111426266-3	7.47321901622417	0	1.35982614624584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81024714-2	3.95721952997477	0	1.42778086130123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30498717-5	14.0801093980299	-2.68374425850613	0.586607677405266	-4.57502409511089	4.7616518188918e-06	0.000482907894073021	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66571694866297	1.93957782847288
Merged-chr1-39464006-4	9.41044856354686	0	1.36594205989241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43349669-4	7.47117950576695	0	1.37860831636123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68248877-4	10.4530290017574	0	1.35982496320335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114883002-8	21.3907872644537	-0.0917128332747498	0.426687021443692	-0.214941698869678	0.829812773608236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17282387057061	4.10607537979303
Merged-chr9-95188506-3	11.0110128814497	-0.81246550358943	0.774059394320414	-1.04961648880024	0.293894473005211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46548184580302	1.95540490230258
Merged-chr2-156850668-4	6.4243023455497	0	1.36102534661604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-114947586-4	7.73005334430896	0	1.35793420553202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120467540-3	10.7385008828058	4.62956846953137	1.05586599872722	4.38461743735667	1.16189788204533e-05	0.000997782100633527	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.44502315971625
Merged-chr15-74930925-6	22.9934780406282	0.405762952225435	0.40836171500714	0.993636125311944	0.320400050083149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88779571416984	4.25067216791864
Merged-chr14-62844040-4	11.3017574042606	0	1.35589827066826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94432395-6	20.2494588920036	-1.25326301203706	0.833932730989261	-1.5028346597577	0.132881685743361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90896656829731	0.815004392037195
Merged-chr15-58750227-2	4.4211682533555	0	1.40410060812326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129554701-2	4.71307893662655	0	1.41978138453657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102381798-4	9.54504247195199	0	1.34791652718344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135602451-4	8.31673977582167	0	1.35730385714066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29950991-2	5.807478606036	0	1.43525968163158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68145013-1	2.85668706650691	0	1.49422070311939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59967371-4	13.4120172848162	0	1.3758815002064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127722603-3	15.302396423838	2.26429327241047	0.763992327833703	2.96376441217789	0.00303900850458595	0.0859508133718978	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	3.70874005954337
Merged-chr18-69400116-7	21.0511919293916	1.51524317913738	0.512028595292871	2.95929405714283	0.00308344719627941	0.0868011942737195	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16975473850456	3.96260453108721
Merged-chr3-52756452-8	34.8393157644426	1.64336091115815	0.356560497049547	4.60892590389729	4.04754536805162e-06	0.00042149524647877	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01748266157724	5.68648648008873
Merged-chr2-44961258-4	14.3273224355428	0	1.35099340837781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21200237-8	24.1564529131827	-0.214598807770296	0.400089583307344	-0.536376893385508	0.591698097566943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14717355650071	3.66108798082884
Merged-chr16-70329284-4	8.52098079420859	0	1.35213192762314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-67568441-4	7.50901853944367	0	1.35343439919966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99307731-3	13.8709294818856	-0.47896856132208	0.484838597554486	-0.987892803374125	0.323205150360741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9872399928445	3.64186018382293
Merged-chr14-103376945-3	9.22638690534966	0	1.37621451249409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19956671-3	5.12807849975188	0	1.37466649008118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44977782-3	7.19420516572065	0	1.37050753257865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77936067-8	30.5816179529622	-0.872593127368909	0.357760973662508	-2.43903944702494	0.0147263606307526	0.263499090693575	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88049491750017	3.98831741437878
Merged-chr7-101033534-3	10.0752304733855	-3.71961802164337	1.09672574880433	-3.3915662376839	0.000694943631055639	0.0274737751567662	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66796869820479	0
Merged-chr18-76161006-7	25.1503124629711	1.18538894620807	0.388929521518686	3.0478245559231	0.0023050446107579	0.069533806879128	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89350703465938	5.1084910237332
Merged-chr6-8427771-6	16.0491304221171	0	1.34619687210357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85575638-4	8.21167136172034	0	1.35556586422363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169928104-8	53.3191688703624	0.519559115200922	0.406281411828588	1.27881586524595	0.200961905686397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11577946735657	4.27367578365748
Merged-chr5-35670677-4	9.85897521995296	0	1.36995004923591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48842455-4	13.1539708885923	0	1.3706169762901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-71735732-2	4.89696411636442	0	1.41579352197174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40525627-2	4.57765468360091	0	1.42504773085677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122880086-2	7.31398641069645	0.125440142396324	0.72856879277088	0.172173367348404	0.863301234976532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93017649057304	2.4423760391517
Merged-chr8-109458245-1	4.29508019722007	0	1.3979259517925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38742697-1	3.22232706160678	0	1.49307418909389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61377813-3	4.65899863887696	0	1.40448207293149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118709261-3	7.48383095689263	0	1.36384645265952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87187103-7	22.3910022795766	0.429755996244446	0.480229790946845	0.894896577317949	0.37084237657617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97187918383725	4.05319346076397
Merged-chr6-47175051-6	27.3868159784622	3.11413846984041	1.03136805126916	3.01942499189139	0.00253254995332712	0.0746161967007638	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.70303879967302
Merged-chr3-138521972-7	14.8712310502592	1.10428166880995	0.589598994878638	1.87293682384458	0.0610771094496272	0.674540596121685	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7414873742332	3.52721763800331
Merged-chr2-165061780-6	20.3563767199819	-0.104534992910893	0.443717260106062	-0.235589196791458	0.81375145724299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06593221879814	4.94694691140894
Merged-chr13-95845265-12	106.613606742688	0.359779693576516	0.184217880498456	1.95301179561411	0.0508181975021136	0.595478852773743	C57BL6J_F1_Control-BALBCJ_F1_Control	6.94977033983467	7.2917731019512
Merged-chr6-38805836-2	4.86896035584347	0	1.39240086633394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152809106-4	9.67506935928773	0	1.34691483619097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83831310-2	5.95718917425199	0.461295618909934	0.940190126816676	0.49064078185101	0.623680536952164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29451429493117	1.04648494364547
Merged-chr10-39449382-4	10.1463510416347	0	1.36119338936418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56535232-1	4.01380827898352	0	1.42877947624905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124142025-4	9.92047352183337	0	1.36575225558549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107832964-8	32.0835920943349	0.779453437955414	0.395441324969326	1.9710975781701	0.0487127157063645	0.579552311902444	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03814434318476	5.04944907468131
Merged-chr8-83736819-3	9.62059102718658	1.40581701253075	0.793082041236719	1.77259973046237	0.0762950564321248	0.77160243676066	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.35612604634828
Merged-chr17-67213805-7	18.2637121200823	0.439406524923834	0.562740637791329	0.780833114609312	0.43490065488539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12426893426501	3.85924362697325
Merged-chr3-146607442-4	15.2387347718408	0	1.3681843849751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-53459640-5	14.1812517368225	0	1.34213041342534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96239113-3	7.49176185420103	0	1.40428846858861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149946683-4	6.89435556996672	0	1.35472342109912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136113206-3	8.36774599721946	0	1.35186385706498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24674427-4	6.40643867678418	0	1.3629196138358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15830321-2	4.1824977330802	0	1.39776002813151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37222049-4	13.6249535896908	0	1.39746280093575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57423586-4	7.41164130429204	0	1.36083278584445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106283894-4	16.1157199776735	2.63156570219718	0.659965173217348	3.98743116908462	6.67925734495631e-05	0.00417480041950646	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51789747318134	4.56218515174656
Merged-chr6-34868487-2	6.28141117127763	0	1.38561566884231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55731168-3	5.3025388343119	0	1.41185902598408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-121497902-5	29.7504935465127	-3.62391763329826	0.452675594461422	-8.00555116652551	1.18932766688187e-15	1.50350378241934e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	6.1784658713643	2.79053920549463
Merged-chr3-127289011-2	6.4647141043028	-0.366206432030506	1.10319098691858	-0.331951979641703	0.739925519531249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.724326877898254
Merged-chr3-52257974-4	11.3462914420413	0.436052060165702	0.774381470104678	0.563097229207665	0.573368678149682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06239241693004	2.35836193412232
Merged-chr10-59369631-3	4.49504415460215	0	1.37445339496767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43751048-4	7.12626285188083	0	1.37080925818676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35757173-8	52.1427930809138	0.22182873778229	0.379344629972674	0.584768361682804	0.55870348061283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1508069030774	4.70164642358957
Merged-chr6-52955476-7	20.3944499683833	0.804723769408983	0.553724568179518	1.45329251337841	0.146142555077744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82286752253771	2.84905570761291
Merged-chr9-31926025-4	8.92564821340209	0	1.34339497027605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69257774-4	8.01506374076495	0	1.34451356332116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8463005-4	8.72330954558162	0	1.36616994953321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95215345-8	44.7857523880094	-0.650068112986617	0.350128995795985	-1.85665317866276	0.0633605128763197	0.689670428402856	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70545175658147	4.11349128673008
Merged-chr8-68926583-11	58.1684154712515	-0.265415763407734	0.309417596509443	-0.857791432684838	0.391007641335059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10409078161809	5.95103849632607
Merged-chr6-131278338-8	22.6139054788846	0.0520126573566536	0.436690213448194	0.119106533086582	0.905190954936707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41005778403024	4.55926387739892
Merged-chr6-57641987-1	2.13986093130934	0	1.52601741920849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94366183-2	5.76478083924877	0	1.39531712790976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53386939-4	10.304136888978	0	1.35223953203834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90494329-1	3.22991693604328	0	1.43713345987649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148941115-1	9.6414156453873	0.831011167010488	0.845334291826241	0.983056259571809	0.325579750280287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	1.62355329225066
Merged-chr4-53125683-2	8.89794909856876	0	1.35752966619615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77167516-1	2.97716642744417	1.45198914177726	1.11486239559753	1.30239314511908	0.19278202469925	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.13118170172995
Merged-chr1-167242331-2	8.91833904658132	0	1.43626701663681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35657796-3	13.0992549397155	0.848034770014275	0.5966054622548	1.4214331307146	0.155190880592258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51665517716335	3.731642928771
Merged-chr17-32492480-1	3.71173546515896	0	1.42232784060765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5996143-1	2.80761226451616	0	1.3977715699419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143956384-1	2.60535860342679	0	1.42506155576106	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95322536-1	2.63649131861931	0	1.47931991590862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31918284-2	3.99869341425322	0	1.5235674762082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24037684-1	3.01940136773018	0	1.40038228491397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50970616-1	2.30003574730146	0	1.41865821033674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38594292-2	4.49259188922293	0	1.38082279584653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156455254-1	2.8839729019117	0	1.42189628563992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52820476-4	8.09029969319541	0	1.34694372403574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60442826-3	15.0960012553841	-0.138173526658889	1.02476141447046	-0.134834825655775	0.892742470364058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56605965819909	1.38910170141189
Merged-chrX-139432800-6	16.0332569665176	0	1.3464561401432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71276429-1	1.64283242856811	0	1.49890740434221	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25706485-3	8.9407757068868	0	1.34861870527217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35068439-7	20.7209038214525	-0.559732521989323	0.519127075286376	-1.07821870335032	0.280936167111885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96705202963607	3.42806999022016
Merged-chr16-92869856-4	7.5847416745858	0	1.36096198426286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68167987-4	8.5904915889953	0	1.35451904095791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148536758-8	35.1234082583289	0.513371155802629	0.328257981938674	1.56392588771395	0.117834974157373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50012225793483	4.9573483974682
Merged-chr9-95564439-6	11.0811608675133	0	1.36498569397632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62635493-3	6.69811738668838	0	1.3938436376248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40766934-6	28.501627510585	-1.5250784899973	0.567664574617205	-2.68658387045856	0.00721868228149361	0.159902343170216	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27805184761966	3.35626715751765
Merged-chr19-55544626-3	7.58313774595975	0	1.35100127821956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146808516-7	36.2663300492909	-0.949144181456559	0.361879418572677	-2.62281890802237	0.00872056110017406	0.183774892043929	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04542272251597	5.05473642654933
Merged-chr9-111074121-2	3.8514315816979	0	1.41769641420139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100747255-2	5.89115282505287	0	1.37585356496755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29842961-3	5.62812712343582	0	1.43136687189611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117083612-4	7.56719360112137	0	1.35233836711061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90414761-4	9.12160608462326	0	1.34420053505047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111656673-1	5.98827295533085	-1.34755561887756	1.36519435253965	-0.987079690427029	0.323603573310544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr1-131438751-5	20.976718130777	0.0116136412079413	0.458774062045789	0.0253145113656888	0.979804099244701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52416959009059	3.40735071507421
Merged-chr18-4239075-4	9.00837092210356	0	1.36934072913638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67827141-4	7.0095118459987	0	1.35724224839354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150611826-4	12.8543372128357	0	1.36028208842134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57596146-4	7.69698365399557	0	1.36317307434714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118012223-8	42.6539004220862	0.266092204532152	0.32515719222069	0.8183494349759	0.413157685884463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15746678260504	4.67528388986811
Merged-chr7-30909031-5	14.4412761345759	0	1.35146378327681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17917716-3	12.2488483780452	-0.5649938917129	0.734437603024559	-0.769287805235113	0.441722474972533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42512484922428	1.610618888618
Merged-chr7-63934024-4	7.30771382092943	0	1.34970465356472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73177346-4	10.2437856765683	0	1.36175591864371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74759364-4	12.241072718394	0	1.36029660990571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41893901-2	3.43620843730356	0	1.39803227768472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52411415-4	10.6990087904921	0	1.37854697421852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37397593-6	13.7581649285991	0	1.34704242181256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43102791-8	28.5126366445992	0.0587031451368766	0.369633576401275	0.158814428354713	0.873815080904991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68553447097632	4.73289387334908
Merged-chrX-166253323-5	15.7184836479629	0	1.34367490167122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122570642-8	43.4159680490941	-0.717752997813699	0.28805196939399	-2.49174827488152	0.0127116091739401	0.238354730281548	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78955842344246	5.04193775891043
Merged-chr2-4969289-8	23.1555241379563	0.14497475998843	0.40407944718139	0.358777861630144	0.719761275414588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7605338544829	4.03332542703617
Merged-chr5-41740032-5	18.9957639356174	0.423527197413474	0.684296683780714	0.618923352183299	0.535966853818731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	2.39933682076522
Merged-chr3-142521470-6	17.5830491043902	0.256349092646864	0.643500011674891	0.398366881112624	0.690359767055512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40848497238157	2.79657754568849
Merged-chr18-65555130-1	3.79370472112996	0	1.37421362862178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4341619-3	5.02266164555179	0	1.37139786309125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45325621-3	9.56287846188934	0	1.37357440856649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146798178-5	14.4633565102674	0.297155757066955	0.734021554526815	0.404832467431445	0.685600661526019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77338015316878	2.11005512232597
Merged-chr1-185276053-1	2.79857155834563	-0.998506298312706	1.50215289670198	-0.664716821107195	0.506231632877178	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.41385117919798
Merged-chr8-54507911-4	6.99652771092304	0	1.37062844607391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38472961-2	16.2439948078661	0	1.38083121987662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-10729676-2	5.45968516566256	0	1.38226805868366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41367388-6	19.944916987336	1.59006016162833	0.664107340593288	2.39428186444653	0.0166529457910705	0.285773294176068	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75733238011489	3.14381670471138
Merged-chr6-145340027-12	79.0389095467918	-0.0772894906627497	0.263466251876065	-0.293356322156611	0.769249807363146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.6685510151437	6.59179254381953
Merged-chr13-6906196-4	9.07146307326058	0	1.37106334780624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24361910-4	15.1398007368507	0	1.35742848231474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118581556-4	6.9417845382077	0	1.39581553767868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94565701-5	15.9921336393098	-1.84836655485925	0.900501264312192	-2.05259740114973	0.0401116398175905	0.508021581743803	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01583999335146	1.17788344834821
Merged-chr8-95149606-3	6.93455484194964	0	1.38862002856613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3712538-8	34.5636663773523	1.64565558672874	0.561972175130562	2.92835777206658	0.00340757693278404	0.0937284288108783	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16430127775811	3.67420445266226
Merged-chr16-76763943-4	9.10465483507179	0	1.35655160267451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89098332-7	26.3621118477904	0.823465318305302	0.404393588504583	2.03629667164214	0.0417205738540939	0.522386890345779	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65301297345672	4.41730985508021
Merged-chr11-22809588-4	8.73079440106675	0	1.36317806500278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123953789-2	5.82018372895358	0	1.36345229597792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79878868-4	4.80605173559877	0	1.38789280217568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96237852-2	4.51181772921621	0	1.52118305173909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150891472-4	7.23864413385996	0	1.36460176051554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40713794-2	4.71437732909979	0	1.50259621751405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34109774-2	6.31543017269037	0	1.44137620578191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17427084-1	2.6747757765732	0	1.45111440471416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40783531-4	8.86662503395025	1.63913479070655	0.764122913281482	2.14511927625279	0.0319433115963453	0.44015373258954	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	3.01788632613492
Merged-chr15-59202465-8	61.0557307423038	-0.542117195486098	0.330193460187874	-1.64181687662028	0.100627960444828	0.914568684470888	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89975038789804	4.33211775469119
Merged-chr3-88522041-6	12.9070648211128	0	1.3543774252972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68180256-4	9.53115895714949	-0.0489898238494063	0.923528716170553	-0.0530463460330119	0.957694980876488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	1.18909650862134
Merged-chr3-95174389-3	6.80256520131222	0	1.37085027259352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114358437-3	5.71619874081083	0	1.35412602107422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46742788-6	16.0270040562919	0.587068441867847	0.787149541166463	0.745815643871024	0.45577878846654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.82783833200961
Merged-chr19-53264001-3	4.5417919810009	0	1.38111351671402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41587165-3	9.22676017596768	0	1.35928331744478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72891689-3	6.45092294453655	0	1.36353800697322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35163878-7	34.4817523675142	-0.15985189319049	0.473781490811355	-0.337395817039501	0.735818537507712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76318007077575	3.6520517968542
Merged-chr17-44116172-4	18.6824002334032	-2.27086337510785	0.460409613687682	-4.93226750179958	8.12804988484446e-07	0.000107501864644832	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13566490869025	3.02053288632899
Merged-chr4-33284656-4	8.58782414404854	0	1.36020516955401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166694713-4	8.13704979504143	0	1.37067304905433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4741711-5	16.4198812526544	0.508528204949571	0.647412396049585	0.785478016875387	0.432173354333829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03951848988522	2.89403398885726
Merged-chr15-98928808-5	11.7967352195844	0	1.34337624772282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68782631-5	12.5071595462736	0	1.36048960129633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52764267-8	29.9767026713793	0.310952025862364	0.352848461110175	0.881262241824744	0.37817589769483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27201997464636	4.57991860851038
Merged-chr5-141084483-4	7.17282192770192	0	1.34932686084398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144898192-7	13.0496803467908	0	1.38693310662158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-65101462-4	8.47711744326638	-0.825458368738648	0.824328019749948	-1.00137123688825	0.316647364471376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92738623187092	1.28067447403188
Merged-chr18-36687899-6	17.4214511696706	-3.17420956601313	0.758021065917973	-4.18749518810419	2.82049998919946e-05	0.00205522196934173	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30959206450071	1.18909650862134
Merged-chr5-125408139-2	5.2330569206614	0	1.36675180293229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70569811-4	14.302146310198	-0.0629787346738423	0.659104643747685	-0.0955519510767572	0.923876427992821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67022672221125	2.61587275731202
Merged-chr2-170158271-5	14.2053432947044	0	1.34438188641967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41467999-2	3.39631249413823	0	1.48999229936898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120866230-6	21.3956464746979	0.129684647021545	0.480630089826893	0.269822155887604	0.787297076867298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72978091692342	3.44768783218163
Merged-chr5-139060597-3	7.58091084740553	0	1.40473239856656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41804096-3	7.29764557201448	0	1.41968756019877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121632090-6	46.7382267058914	0.327836730627557	0.436980120598146	0.750232596802821	0.45311462976537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44384397960235	3.69376283206828
Merged-chr5-96860150-4	17.0434962168151	-0.489322611675872	0.558755474865876	-0.875736585477449	0.38117325134671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55462298584197	2.89070142710993
Merged-chr10-82962681-10	95.7125520778756	-1.23054758593093	0.242485158707295	-5.0747336145893	3.88039228343755e-07	5.53633186707038e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2104207657039	5.00334483330642
Merged-chr6-43349115-2	7.10767197275913	0	1.37105293689417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59866795-7	55.41058621183	-0.162605877702078	0.327216550677681	-0.496936592496051	0.619233766018334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67936839002652	4.59763959851196
Merged-chr18-75455391-4	11.2330847956987	0.334449692826497	1.14824926793161	0.291269241067277	0.770845410141101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.765562747387088
Merged-chr8-126867745-8	53.9653786883839	0.02086873308827	0.360334020851456	0.0579149674486964	0.953816360833794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60144996547189	4.61466746864014
Merged-chr19-32225307-3	5.73264992579863	0	1.36027886691818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125521376-3	7.12689496519633	0	1.36123648571227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75163715-3	15.3735740118369	-0.0903699306607859	0.460044031282854	-0.196437567962321	0.84426769404204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90614682200132	3.82924616819891
Merged-chr8-79945671-2	5.05358481511883	0	1.40029176780813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43369359-2	5.81521856120386	0	1.36178963504235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94519169-4	12.9227916011162	0	1.36133380619753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148599662-4	7.1566274981761	0	1.37686055210173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4929457-4	7.70279191557737	0	1.35889488786481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115850134-4	7.03727131016763	0	1.35949296278474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80175204-4	8.12461048267174	0	1.36350362113801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30466008-8	38.9696463052174	0.807245318216816	0.401205169644126	2.0120511381567	0.0442145466083963	0.543154472109788	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10346112363482	4.55548661023676
Merged-chr8-34908750-3	8.37431423330203	-0.373000742981166	0.794770346951914	-0.46931889747987	0.638841709561339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	1.79230704629306
Merged-chr9-65357141-4	8.88492498862034	0	1.34999995401805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135677435-4	7.9456766822245	0	1.35353077948853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69527306-4	11.4798711404764	0.728283865630156	0.731686720173401	0.995349301211263	0.319566407339505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82648481524113	2.77713251909152
Merged-chr14-66277163-5	12.622762307836	0.821587240295154	0.760540554220453	1.08026749623795	0.28002307943708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.15763548802947
Merged-chr4-3607832-4	14.1364950342516	0.781881985008813	0.466732716356946	1.67522429349231	0.0938902328013883	0.874983570178411	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58111491336869	3.85591859460669
Merged-chr4-20033489-4	10.5406413562644	0	1.35582902232996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56686087-3	9.05703414202664	0	1.41131949932826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122337610-3	7.66418992954033	0	1.35779947441144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67113538-3	5.55028752898383	0	1.39210054590957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170806366-3	7.24202862390007	0	1.36579662870752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80614333-4	8.49376369345643	0	1.3573115325915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75548089-4	8.01902793561128	0	1.35742010862685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46275501-4	6.17646851878386	0	1.35636533437948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105962826-6	21.513219778697	-0.344254138525398	0.385661911956243	-0.892631934481661	0.372054311738913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29106975859884	3.94337963883442
Merged-chr8-33855876-2	7.43312223806383	-1.15627583987509	1.01578187711071	-1.13831115314244	0.254990578454108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41834317992225	1.25156707489019
Merged-chr12-101906027-4	9.96050737639014	0	1.37602177554509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135598096-4	8.60601278819541	0	1.35495957374887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5688550-8	52.1030757640254	-0.0363643042850373	0.376786128508481	-0.0965117915274282	0.923114109359232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80133253917827	3.76608831965256
Merged-chr4-47319699-3	9.02853226032343	0	1.34835135090675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57786229-5	20.1797318273979	1.19431388796671	0.516845409819766	2.31077584375412	0.0208452394535597	0.329622943452264	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37172738360265	4.4886357246006
Merged-chr8-85559381-6	21.9301050457221	0.186146778310943	0.325541999832686	0.571805722169841	0.567453600243216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92639998548237	5.14448547837889
Merged-chr3-89378560-4	9.76819540933925	0	1.35816886895115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102043213-1	2.74260728991872	0	1.48024803308741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182045386-4	10.5790859103307	0	1.34296492438645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116478160-1	3.57749808736999	0	1.44115919391471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15815386-1	4.14343706975393	0	1.42543980939374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80161882-4	10.906453263246	0	1.34582635374652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88248333-1	7.53838745538689	-1.00876322895565	0.63578245410168	-1.58664842423337	0.112592293535346	0.978463546254724	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82902491979391	3.003960471792
Merged-chr2-128747708-6	38.0629679827865	-0.330386308344881	0.420352749485584	-0.785973943905917	0.431882752289683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74749432989733	3.6790508850371
Merged-chr10-122820987-1	1.49785716579832	0	1.62227177787529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95566536-4	8.65131548586264	0	1.35292109062505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119443635-2	3.47373978811289	0	1.41403904498225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43767079-3	8.16590522600708	0	1.34913506610347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-59032292-2	4.25405981838002	0	1.39019470133695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-59579866-1	2.22039923340386	0	1.51606589977491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33406841-1	2.547605517355	0	1.51428226353435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73592919-2	2.76569014611196	0	1.45386706614452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-28516261-1	2.62624708496186	0	1.43064719882818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80707193-2	3.39255533131215	0	1.40872933962429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40464032-3	6.67972115918959	0	1.38680383974113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20934899-4	10.4023722427398	0	1.34792940105227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86169249-4	11.730844744597	0.609289096901083	1.02445298731204	0.59474578574829	0.552013411622743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.14143228603163
Merged-chr15-25900765-2	4.89036063013653	0	1.37024022781546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34635841-8	50.9738747395245	-0.50302112492557	0.422833707886404	-1.18964291527275	0.234186770804222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46068288964695	3.92705063596396
Merged-chr2-43862873-4	7.69217116695495	0	1.36567283099415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40563711-10	52.7998071490739	0.26644720906612	0.319762920525605	0.833264872075074	0.404695363111782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7896430168175	5.03971539712498
Merged-chr9-35060098-4	6.81726453486675	0	1.37352660399261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64376037-4	13.0712487755723	0	1.34138549916671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105557745-6	21.7530809109899	-0.100626968872683	0.491540928227161	-0.204717375693646	0.837792944073252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54431388502496	3.46963836145522
Merged-chr16-92019563-4	8.29448854645631	0	1.36642403700468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83879448-8	34.3370353173523	-0.460330999548584	0.389639694887765	-1.18142736889572	0.237432990861345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33421814697478	4.88009790914797
Merged-chr5-62763158-4	14.8235536462351	0.517155777475638	0.498147644418253	1.03815762910931	0.299196675212621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14637975729418	3.70643279504844
Merged-chr14-103020943-3	6.19198726452198	0	1.39427742755671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50113109-8	33.792852896736	0.0517325855720258	0.255525237034172	0.202455875484062	0.839560350344949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60345545337438	5.58464567525668
Merged-chr3-115692623-7	32.675919755514	0.96238546720162	0.365527220221898	2.6328694935972	0.0084666873468571	0.180152577344945	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68749834555515	5.56348536932216
Merged-chr4-136070142-3	10.1317421669472	1.97293135359439	0.721053378217853	2.7361793359469	0.00621571413879863	0.143323371454419	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34557707159302	3.56508658773346
Merged-chr6-124311717-5	15.1501014205348	1.41841895928508	0.857872602574481	1.65341445224896	0.0982465435451686	0.90111468233612	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	2.23659438538296
Merged-chr2-127079665-8	27.0931083190308	-0.757474108881507	0.38892072347328	-1.94763113190996	0.051459115893432	0.601562598032488	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83565592555611	3.63450364674563
Merged-chr5-65986616-3	6.75065916849372	0	1.39126753359766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136088045-3	7.03954823309942	0	1.39861495727363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18890481-3	6.00520544268464	0	1.38621641771798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63368785-3	6.19170737099023	0	1.36604518616402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118706359-11	50.0457170778329	0.0525504963574075	0.253239613183434	0.207512938820288	0.835609288874735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12103082844023	6.12616756325573
Merged-chr5-100526347-5	28.9877358211164	-0.697324138803464	0.449143071310862	-1.55256572648057	0.120526919035105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83934070333818	3.46518950641967
Merged-chr10-36917077-5	22.4054274105752	0	1.35476723949436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46842458-8	30.4222371619754	0.36825564553026	0.38325725448869	0.96085759947729	0.33662377250247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24733232649943	5.66712309030784
Merged-chr2-33436451-4	8.66102723750912	0	1.35795424192875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75964635-4	6.05985701407955	0	1.36712476500875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71562961-4	10.5538298260215	-0.0817917051968415	0.67457515506535	-0.121249210829471	0.903493647003947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22017310661124	1.68580115571326
Merged-chr4-66842373-3	7.39981369809118	0	1.3662100376175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65698994-3	12.2731151416896	0	1.35130667806658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90876234-4	5.42823355883971	0	1.40566448234982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70553077-4	50.575010941897	-0.473857357495492	0.445147625371953	-1.06449485628403	0.287104583327485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10755303700143	3.3324419528763
Merged-chr5-88961567-3	11.841491822028	1.08679906825058	1.31104590161157	0.828955772574142	0.407129434135417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.67591700901439
Merged-chr11-74826300-7	23.6401433771035	-1.51491287178061	0.449407538775267	-3.37091112425279	0.000749200238230237	0.0287611410663541	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71108289404269	2.23767483401039
Merged-chr6-15793728-4	8.66133264713015	0	1.35577646008167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49292125-4	8.71909940379886	0	1.3626911079492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36711456-4	8.89496038041063	0	1.35334738965767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17989346-7	21.0482088277977	0.486220288800032	0.454946302958979	1.06874214745267	0.28518587417366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1920917418009	3.96944726942336
Merged-chr2-116999017-5	35.5873156682006	-0.203057861722648	0.71111380130516	-0.285549037791083	0.775223540716894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42194161705889	1.86837022561939
Merged-chr2-160136980-4	9.36045098176722	0	1.35694858253396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5710107-1	3.3772272635047	0	1.40142107568671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34380765-4	9.47442592441857	0	1.34735806577818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44267150-5	19.2115462915761	0.201269359525098	0.510207797954278	0.394485071243727	0.693222946916809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46098692661536	2.92740284843723
Merged-chr19-11989551-8	24.2560654995676	0.00823880234515735	0.388431329871196	0.0212104475400821	0.983077780226301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54342238895105	4.19170439916881
Merged-chr3-144628331-3	7.42761199073773	0	1.36042753314006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34976641-4	6.23585835118751	0	1.37584357450826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27778021-4	8.30018077138964	0	1.36159007310039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33492052-2	8.61706373892512	3.76706099808402	0.920520064336604	4.09231818406788	4.27082079417836e-05	0.00290560134606685	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	4.25622441238495
Merged-chr7-109666931-2	6.52212817875898	0	1.39806441029087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138341884-2	5.58491090838692	0	1.35781919316452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45386921-3	11.3799235501556	-0.668097313375015	1.06260497967659	-0.628735349591865	0.529522331418175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.904676873936758
Merged-chr5-125189693-6	16.1600996726795	-0.28409732018592	0.675907296490263	-0.420319948698782	0.674251738770325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	1.86695701565796
Merged-chr13-23729217-11	58.2160225561652	-0.03871347260372	0.293232106968108	-0.132023307420188	0.894965856456607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29364835320265	6.24070076292893
Merged-chr4-136125638-13	68.3754011209479	-0.0186697562306431	0.210224525701014	-0.0888086495540282	0.92923398350589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.25412201546992	6.23871596844148
Merged-chr1-128642370-8	35.6718581755851	0.350353201178379	0.337361339802959	1.03851022581013	0.299032577035693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91863672706533	5.2016473131938
Merged-chr1-57392675-8	21.607615881328	-0.00705169658010683	0.367247486667523	-0.0192014835665598	0.984680374106794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41504516829582	4.51675701197001
Merged-chr8-40410639-3	7.89777370050216	-1.87529293958536	1.30385893279087	-1.4382636744079	0.150359254576524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr14-50838303-14	65.4759132862547	0.488759556035637	0.229386622560938	2.13072388694243	0.0331118959966137	0.45143652982591	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6541877593317	6.0653634346485
Merged-chr11-5730109-4	15.8405078840356	-0.213447621314408	0.540929965946025	-0.394593819444098	0.693142675541824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97123419362971	3.54670059165995
Merged-chr7-126554208-2	5.86269752318607	0	1.37251450334117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149689969-8	75.0226737369449	-0.928061984659204	0.274427185345889	-3.38181504682005	0.000720086091546184	0.0280596127959563	C57BL6J_F1_Control-BALBCJ_F1_Control	7.05600063242571	6.01443292760687
Merged-chr6-34216968-6	12.8987008569033	0	1.35784652475912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3770838-12	47.4090294050378	0.575661760878499	0.363333781213018	1.58438821448588	0.11310540222616	0.98121553776122	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46408969234719	5.1288826502237
Merged-chr8-120818266-4	9.82369052706968	0	1.35811528353649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35799472-8	40.7886053054848	-0.394459172841041	0.33866348582522	-1.16475259173532	0.244119153961513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78312351964104	4.42855742886658
Merged-chr11-120034998-5	19.0321617153675	0.581534861848444	0.573523701245997	1.01396831654044	0.310597870828504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60666171676197	3.45193411335301
Merged-chr5-28004637-8	32.5855411598253	-0.143251928388041	0.407357086401099	-0.351661805256998	0.725091908081815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17677491856976	5.04066883325109
Merged-chr17-26955765-1	2.43264847206342	0	1.39903404769982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64380588-2	6.29594479302263	0	1.36415520170891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85496955-3	7.75916358348063	0	1.35603804014702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91701996-4	13.3884269593664	0	1.36014131116882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157553259-8	23.7612066076355	-0.263978816304744	0.410836141717868	-0.642540393843991	0.520522370689625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99114422482841	4.81600561846478
Merged-chr11-113544375-1	2.96726613605296	0	1.39996296989973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106836375-4	16.532375535423	0	1.36050616735101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12781376-4	7.92729143577463	0	1.37258303359593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37400521-4	10.5772441928994	0	1.35430108439676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75363970-2	3.68695153706402	0	1.42668476603454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6388724-4	5.04352453301349	0	1.3749008891414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120518303-4	8.80261070027088	0	1.35413599712136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105731819-33	133.41485962518	0.25274301770058	0.204227668646588	1.23755522146192	0.215881026668899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.47937191422009	6.71861533092207
Merged-chr8-123849541-3	7.62322721697656	-0.942491825618715	0.758759004170097	-1.24214911511934	0.214181549975937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12295560242613	2.55054191900501
Merged-chr17-50025367-11	51.5362522321423	0.192466059949916	0.294665961325183	0.653166925301959	0.51364867040227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85147589468991	4.99020680085864
Merged-chr1-131691996-5	26.1813564757747	-1.0174631616855	0.426120974113766	-2.38773311687271	0.0169526475268786	0.288738163057067	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9070958358369	3.95310630980823
Merged-chr18-62985834-4	8.72216425656118	0	1.3602785600869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47889008-7	20.7464162870341	0.423155322038636	0.499146420035424	0.847757902397867	0.39657281226359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63292614061591	4.07667729286711
Merged-chr2-155309556-9	35.7227491122387	0.191844191863468	0.293830956077227	0.65290667268239	0.513816446927739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36188103991255	5.55691200603915
Merged-chr12-21347119-3	13.4046193422412	-2.69278162639044	0.60735804050567	-4.43359838316868	9.26731883203361e-06	0.000832664767587629	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43710491849542	2.49267962363222
Merged-chr5-148634148-3	7.26974053622681	0	1.36695267107284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21052102-3	6.89661375519396	0	1.37509882600262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78300965-7	30.7220796908919	-0.047163776498094	0.415295697816571	-0.113566735090344	0.9095812582521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10853101774513	4.42083460121327
Merged-chr15-6087421-4	8.37207483344105	0	1.35879887463602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90305146-4	9.58079362707964	0.347988314050084	1.0700233484425	0.325215626889459	0.745017882430274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.13743241080208
Merged-chr1-36277456-2	4.69833320622795	0	1.41449924792447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14224552-2	4.12029912102425	0	1.41101846303764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73640711-2	3.5416126551711	0	1.38322724224066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8998516-2	3.41483083676058	0	1.39916941770215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43372365-1	5.09702923800836	-1.18748848796521	0.729213323754665	-1.62845144113786	0.103429197649907	0.930845654809818	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73345423903748	2.16517866554277
Merged-chr8-126692401-1	2.338731763749	0	1.47629762277787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43383741-4	12.5463512151314	0	1.36381917981909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35098997-3	16.3855610902849	0	1.37102992650473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63385451-3	6.08803891649143	0	1.37276885316955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128558170-6	41.1951492012615	-2.47323741950433	0.400776661447086	-6.17111138800899	6.78116261428349e-10	1.99252550567479e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	6.63824670899578	4.15841657532514
Merged-chr14-98817214-3	9.39649047846623	0	1.37019774307889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73321284-1	2.99056853501315	0	1.38577006883148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21389671-3	13.9547202760013	2.96285328732634	0.728461330124016	4.06727600327382	4.75658936995507e-05	0.0031764550560367	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85717356975375	5.66619012797518
Merged-chr1-95598300-4	7.25989441939517	0	1.35573609025151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50479855-3	4.28313426570373	0	1.39739707634031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140821704-1	1.97557901850099	0	1.58844788855165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12760406-4	7.05516870675505	0	1.36312116350822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20211942-8	32.2472297738228	1.3105591408334	0.402088730368178	3.25937794783098	0.00111656812000808	0.0391079422909272	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6828465559522	4.98862664052533
Merged-chr6-125084586-4	9.98214974129601	0	1.34956888951367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121372095-6	24.9949400177816	-0.637669499900136	0.4593250392497	-1.38827506756818	0.165053301281937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88281971728502	3.44420453111513
Merged-chr9-57862091-4	7.89890229727126	0	1.35311860583493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30772084-4	8.36978465272284	0	1.34725775960852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107989114-4	9.37000915984457	0	1.34352713936568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53735762-4	7.42816050825849	0	1.35054386071809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72785992-2	5.8878426714445	0	1.36558807490571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120826503-5	72.7345400987631	-3.99388920309464	0.360508890240494	-11.0784763183797	1.59564842948659e-28	1.44563088297436e-24	C57BL6J_F1_Control-BALBCJ_F1_Control	7.24319316413558	3.39641005451455
Merged-chr10-111516340-5	51.0590319890054	0	1.33396368790978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105421233-2	9.50450659093805	-0.0355936480226499	0.611881647395626	-0.0581708050472643	0.95361257552763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23192622730314	2.20980392844065
Merged-chr6-82752845-7	51.224010180564	-0.190605951612094	0.377924169599774	-0.50434972659713	0.614015639408896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44368195400783	4.34924261638693
Merged-chr12-84034211-4	9.50983354387501	0	1.34688072908561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117874176-4	6.83633383374234	0	1.37315118312682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60642807-2	13.1299419596182	0.325110387768704	0.586262318557661	0.554547644420589	0.579204108485059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38971150924877	3.75575586880688
Merged-chr3-136265509-1	11.0053291384657	-1.11570919926421	0.890257670127925	-1.25324300671725	0.210117282912679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11914669500137	2.33008424732248
Merged-chr11-116784399-6	32.9181262291929	-1.82676711493282	0.378574314737346	-4.8253857798045	1.39732527846392e-06	0.000170116061671238	C57BL6J_F1_Control-BALBCJ_F1_Control	6.49639497437023	4.47600057248109
Merged-chr2-17896192-4	6.04085994227849	0	1.37156163556127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62199154-4	9.04473212933435	0	1.37175298360237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78815981-8	28.6529536287191	-0.792958623124616	0.470921761898389	-1.68384365999147	0.0922118869697826	0.86377260309693	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86699401279623	3.79174469473857
Merged-chr17-26691424-4	8.37108023379051	0	1.35628940295234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12371332-4	7.77686007814237	0	1.37179462692608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123292991-4	12.9310215643034	-1.88997763907303	0.786781294326283	-2.40216392115856	0.0162984031662158	0.281437388091591	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60723990317186	1.17858215524007
Merged-chr10-20893572-3	8.19553355649579	1.51393392712832	0.769596062952216	1.96717992724752	0.049162471283161	0.583314375327593	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	2.69648965452194
Merged-chr12-17507350-6	32.6044063465148	0.694876240241449	0.461228699430375	1.50657632775158	0.1319192889315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55276323848256	4.0888950358909
Merged-chr12-73693567-3	7.46327595191524	0	1.35920738417601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69920351-9	51.4289320637945	0.491684402421461	0.320447891206272	1.53436616658827	0.124939596198461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08072516701012	5.53653775915414
Merged-chr14-47654382-3	13.6343346222012	0	1.37374062611568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50865102-6	13.998991355771	0.895125397229711	0.575455766944381	1.55550686716157	0.119825400358309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20751823872416	3.25645740404914
Merged-chr2-21186760-7	20.2169818685466	0	1.33948364529216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9118028-1	1.94179763063071	0	1.59594622238508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39655204-1	4.5609882833213	-0.11096522069561	0.852538627605313	-0.130158584142163	0.896440960835475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20642815764035	3.02966837275333
Merged-chr1-120532753-5	44.3503077188579	1.2917642166879	0.585193119679407	2.20741525019224	0.0272850619142491	0.398087410144079	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	3.52294931757155
Merged-chr3-97994243-5	16.368182552264	0	1.34410311388887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120044912-5	14.2518367745078	-0.201591843169399	0.572716528275151	-0.351992361345905	0.724843991122348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83018307122232	3.23845884299162
Merged-chr2-79628810-1	2.94218451072077	-3.53167032277854	1.20936934195237	-2.92025785693983	0.00349741870677334	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43282905033915	0
Merged-chrX-167196547-3	10.5900237105741	0	1.36090685396956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159200314-3	8.47912213882841	0	1.35919996526501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13478550-1	1.83305809468751	0	1.65227368428864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158159756-1	5.5013824006349	0	1.37476443648272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89481923-3	10.6369129878456	0	1.40007891404724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27758571-3	13.4784864725563	0	1.36879512394319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123594791-1	1.15745721663493	0	1.89460070851912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67146883-4	8.28158432805325	0	1.36740925662805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137387149-4	7.78943884329608	0	1.36255031033217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118366434-5	29.0400758893335	-2.05169695882612	0.483800107435145	-4.24079475654345	2.22729733401684e-05	0.00171979624687246	C57BL6J_F1_Control-BALBCJ_F1_Control	6.17636178001858	4.1241995900673
Merged-chr9-70841202-4	6.41403059009315	0	1.35255438848563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68130122-4	9.13652229703708	0	1.360724118406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97858587-3	5.64322779958154	0	1.3689086538439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118381568-4	5.7676655002313	0	1.38374625648136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69062916-4	20.4811829020836	0	1.34461734676782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75065506-4	7.43265104137305	0	1.35239867108851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5772648-5	17.1009145942898	0.511320756427109	0.538863749907768	0.948886906040027	0.342678134842918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28793351827533	3.88344726006759
Merged-chr1-85809450-2	4.41707286008018	0	1.38508938748311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94518349-3	5.90761256760044	0	1.38209338604715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174038749-9	41.4722117139838	0.408962345427163	0.382664305334045	1.06872352536294	0.285194267712341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2048967316213	4.70808644732664
Merged-chr1-163975307-4	7.03026621919954	0	1.36322514262736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88099054-4	9.34887991110805	0	1.36175504133386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132030254-2	3.80614806033507	0	1.40454670406073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42001822-7	30.5639503892155	0.557434266334314	0.393966073999973	1.41492961735165	0.157089133181071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66174507259657	4.39845930911927
Merged-chr9-15010475-4	10.4129319286633	0	1.35517330221284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37957407-3	7.94199145081441	0	1.34980708272838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4210232-2	4.75356662774056	0	1.37924338516539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65328128-4	7.16056732853272	0	1.35177583593233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-28414221-1	2.83600978644472	0	1.49168370222492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67767833-4	9.44122885251613	1.25845550591165	1.30672464073959	0.963060974498329	0.335516924783174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr14-70880269-4	8.85750778309006	0	1.35708462663527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155901512-6	22.0693204599699	1.57637444107747	0.376106016603055	4.19130343969262	2.77356417601921e-05	0.00202918135994924	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68191247749185	5.36778075088257
Merged-chr5-146824841-8	38.7082076369729	0.229540130866502	0.323961408651348	0.708541587783799	0.478608995671397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73724027855386	4.63168588131004
Merged-chr4-133170321-5	30.3508973365828	0.559031253468351	0.419885504226473	1.33138974277814	0.183060802701555	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40329553716061	3.9920311736989
Merged-chr11-5502528-5	14.8491575951762	-1.05098690852248	0.571289866569041	-1.83967364034361	0.0658161657508533	0.705800148757277	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67101604500442	2.79294198151659
Merged-chr3-149098916-1	6.20885573789109	-0.168289418368142	1.09600634254513	-0.153547850806541	0.877966258183798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	0.990919527803163
Merged-chr17-34301339-5	35.3101363410788	-2.22762691103969	0.488104532033852	-4.56383164843304	5.02283619405491e-06	0.000500066579986504	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78967693449891	3.49973884584254
Merged-chr11-40714071-1	4.89513678928442	0	1.41135309279323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78895862-4	7.17729065927275	0	1.38020868537964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20943704-3	11.9752184193309	0	1.34325794995412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81136159-3	9.26108847184194	0	1.35399640746874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-13301279-3	13.9171788105611	0.321891386477152	0.612675338680744	0.525386556557462	0.599314497029519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10367374031469	3.47098174288596
Merged-chr14-117778737-4	6.70008679032419	0	1.37774983612653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123027938-8	33.2568391278372	-0.25874209168457	0.381927266136167	-0.677464309637222	0.498111407362061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89360987879412	4.53912075921802
Merged-chr5-36554012-8	28.1385556833177	-0.542572842976371	0.324104566828788	-1.67406725639565	0.0941173820539556	0.876499361156583	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54247018717787	4.93194306852642
Merged-chr8-126929763-4	20.037902771517	0	1.34765560681463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132151794-4	8.42346018391401	0	1.40656100361922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167477197-4	6.790162131318	0	1.35234945827427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90312520-3	8.41020535226804	0	1.36535237297391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80083434-4	7.27604400879807	0	1.36933215452445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51939888-4	10.0624744096409	-0.0356171846746645	0.672199896660761	-0.0529860014135638	0.957743061298989	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	2.1304360554358
Merged-chr2-163951918-4	9.01024893214568	0	1.35148212651582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38981496-4	8.27937911566462	0	1.37060034482297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51498508-4	8.90534864251812	0	1.35442160056436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148559627-6	26.2338812594868	-0.0486443680560908	0.32777685612547	-0.148406963905561	0.882021604529397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04668890300734	5.15277644024249
Merged-chr7-102246014-4	11.1758823883305	0.0369752577329136	0.732377688672634	0.0504865977006042	0.959734629270806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	1.67279875369265
Merged-chr8-3288744-4	7.17386043062946	0	1.35140666038331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156679773-3	10.9721066555095	-2.25897913983578	0.783858399876782	-2.88187144539228	0.00395320983498936	0.104236526553657	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87821054373462	1.25163494309627
Merged-chr18-62037784-5	12.3449479953428	-1.11478396233498	0.598358692413712	-1.86306972133732	0.0624524575700635	0.684309418106282	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75921435372	2.17884592431967
Merged-chr7-13302962-2	6.08595033895024	1.71911831511181	1.07357964414732	1.6012955577946	0.109311472453435	0.962277300582393	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.97033474894526
Merged-chr10-59590053-4	6.88090199446535	0	1.35336597920416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93566372-2	7.9535530119063	2.58796517962538	0.809534276472278	3.1968568284755	0.00138933867232308	0.046561689820475	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	3.60129458306805
Merged-chrY-90807774-1	3.25935146596798	0	1.39441985938092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27342806-3	11.7462273062617	3.00666608257052	0.86552297241672	3.47381430463397	0.000513116011830433	0.0218421873822165	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	3.72890640624679
Merged-chr9-45102805-1	2.49228618780607	0	1.42690145827182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61688475-4	7.16896883076918	0	1.35177497015832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67590462-2	5.58175739432585	0	1.3904924836249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120052850-2	4.52486482427336	0	1.38346949540992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74773697-2	3.97151456868647	1.84084566670788	1.36323656953234	1.35034938751634	0.176903937438767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr4-39611247-2	6.05183207207113	2.80018001024528	1.16593824331554	2.40165379795974	0.0163211466318012	0.281561793004787	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.1304360554358
Merged-chr7-38167932-5	21.3647740180615	-0.188705950591529	0.42000138069023	-0.449298405356214	0.653216407973142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05057594071363	3.98064651299717
Merged-chr2-18816230-4	6.84500859284953	0	1.37868245371979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57514553-3	4.36292752679437	0	1.37989363928426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102967668-8	31.1521811866627	-0.072841578427636	0.393980132809971	-0.18488642538422	0.853318118409351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.996389139505	3.93650599728174
Merged-chr11-106388084-4	10.953668350575	0	1.34584870482517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30770654-6	31.6620124422061	-0.0363887501462824	0.46787978786176	-0.0777737168612929	0.938008054011721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75966928056023	2.73590267670874
Merged-chr3-69634220-8	41.3022003645178	-0.100104029822091	0.292008159537506	-0.342812440517551	0.731739566290987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90958988880437	4.74624831240455
Merged-chr14-77239638-1	7.42504805120205	2.66965286143375	1.05224614680819	2.53709920395688	0.0111775274913328	0.216381487500484	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	2.34407075892003
Merged-chr15-67714436-8	44.5867561155647	-0.281205842223958	0.416612111825753	-0.674982397875105	0.499686948244911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42637386073877	4.25890053330836
Merged-chr4-32373349-6	21.8447211976683	1.04870838456674	0.539884272874243	1.94246885352598	0.052080366969182	0.606592992085877	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13302836160732	3.97097280280455
Merged-chr12-85380486-4	10.0234983794848	0	1.35785887164994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10841317-4	11.6445219944333	0	1.34405993063174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3786943-5	35.4840942931625	-1.23574635179686	0.83232775699137	-1.48468718172242	0.137626708836668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	1.15716269587666
Merged-chr4-139156690-7	39.953461872744	-0.936101473470297	0.254916493577089	-3.67218872476453	0.000240481979169601	0.012104036949704	C57BL6J_F1_Control-BALBCJ_F1_Control	6.75652736903301	5.83610197197716
Merged-chr5-100557196-5	22.4433370890381	1.29102559577595	0.42377998123276	3.04645252949516	0.00231559040065523	0.0696987590889924	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96346561769893	4.81622493858084
Merged-chr13-43791430-4	9.49915462227713	0	1.36942607213621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123411317-2	6.92091231970768	0	1.38149885129672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120165265-5	25.6519329080479	-1.28557730100742	0.514849318229235	-2.49699719022454	0.0125249949130636	0.235995216110649	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90952271120354	2.32937334132141
Merged-chr15-78588758-2	8.88978995714521	-0.305433105735201	0.63826682750055	-0.478535140125134	0.632269369611293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	2.2947317631734
Merged-chr8-108631299-1	3.02973719459939	0	1.41146406589023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43326874-5	21.6350257556492	0.656797369596568	0.468909190611044	1.40069203749384	0.161306184801113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63882497122968	3.83196746029228
Merged-chr9-21011188-2	4.03587966713817	0	1.40948731888379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160627406-4	9.31850259437643	0	1.35334256697081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36244890-4	18.7025098802435	0	1.36320122860056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3169645-2	7.92085464712959	0	1.41410393788314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16634160-2	6.39523319244399	-1.51551372227594	0.864210846690226	-1.75363885801721	0.0794924082830265	0.790845740852221	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21482264138291	1.338064021838
Merged-chr17-48270036-4	7.86902559931386	0	1.34810341372508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-158077597-4	9.25740240840585	0	1.35491686763464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98966877-4	10.8653462577832	0	1.3468648307764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57427753-2	4.13768581748361	0	1.39739764928658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100860856-8	43.440260401017	-0.627746736131681	0.333968993313823	-1.87965574259705	0.0601550109616459	0.667748874997776	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11449673454221	4.54109605520599
Merged-chr3-146328165-8	29.9029580838777	-0.152786255446377	0.366591659085514	-0.416775045639369	0.676842956745029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2834580992779	5.01302100511197
Merged-chr8-122160315-3	6.50314560222738	-1.44419955764884	1.01819824835445	-1.41838739163308	0.156077694655143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	0.577068348605183
Merged-chr9-20998496-2	5.69132788726827	0	1.36998631588707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111071256-4	17.6862585068858	0	1.36796798527327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121422074-3	5.69070084658834	0	1.39299746504737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81113054-9	36.5864198180066	0.204722932087585	0.280180171252149	0.730683157100879	0.464972705671503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78328331929153	6.02800649944082
Merged-chr16-10996659-4	11.9151811518763	0	1.35602561445492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93268516-5	33.1618499146833	-0.100192869973183	0.421536721713402	-0.237684796631557	0.812125576324206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98371373657391	3.76487095013206
Merged-chr2-84523560-5	12.8785517411718	-0.0367071349214873	0.827539551143117	-0.0443569553512966	0.96461987250756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.44790810950236
Merged-chr2-122569668-6	26.8274626294248	0.273370268735069	0.302125479377484	0.904823615996691	0.365558838395354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23079634158238	5.52850304577449
Merged-chr18-75909383-4	15.4729104795567	-0.0365150000419662	0.817234337499443	-0.0446811867373243	0.964361429528825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	1.39284430389808
Merged-chr12-75720209-2	3.78423780184795	0	1.42199354738051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96620083-3	10.4293949291698	0	1.34932942391934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157008883-6	35.803816290111	-0.428062796763128	0.409107007799518	-1.04633454964648	0.2954065992963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26753240228694	3.70027094414929
Merged-chr12-102495701-3	7.28952832529313	0.0459672167912353	1.24502942004792	0.0369205868159051	0.970548325031395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.859510663435501
Merged-chr9-42141841-7	28.4735904884802	0.830667091130612	0.343626358603237	2.41735556756206	0.0156337370494023	0.27413495722848	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15682565434048	5.04114368143301
Merged-chr17-10335116-4	10.682678331961	0	1.35620089843424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-14381795-1	3.11307179896525	0	1.40674294171634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134671026-4	9.69722488160791	0	1.36247396752381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100502758-1	3.29858395916326	0	1.48039635895885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116631120-3	10.907066643439	0	1.36668590737169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117409489-1	5.88847744552738	-3.52663908992254	1.1184044090993	-3.15327716989483	0.00161448434579917	0.0524577134209787	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93176770640726	0.465515277017237
Merged-chrX-106623832-1	3.26586572599238	0	1.46722885510853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-17741679-4	9.7064672114176	0	1.36384992573578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-54054363-4	6.02784149754286	0	1.41334923673238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34723148-11	63.0689459331103	-0.0640130587013013	0.301433531765558	-0.212362102936471	0.831824548950323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45043743559015	5.35918896696412
Merged-chr6-134068598-8	23.3885452275602	-0.13054370670398	0.360343160240394	-0.362276077661337	0.717145733029639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55122192043022	4.36134390834596
Merged-chr1-171637370-14	73.821977303767	0.426715149123766	0.23249580275986	1.83536710795812	0.0664513138695177	0.709652270899207	C57BL6J_F1_Control-BALBCJ_F1_Control	5.72608003272919	6.13864612894083
Merged-chr4-128785117-3	7.99923887441774	0	1.35256058323537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86584590-4	12.2496365578791	0	1.34423957013704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18899244-5	18.5315228340674	0	1.34245060235042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124279624-1	3.58115024173156	0	1.40966734900906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191087142-4	12.1533811918311	0.248586845265612	0.515783021636531	0.481960116633677	0.629834278941481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66067886431113	3.32132944995256
Merged-chr10-5288482-4	12.2221388387296	0	1.34688300410735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106047418-2	6.77921875795856	0	1.35089206161631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106140995-4	12.1190207865195	0	1.3489541707216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43206853-2	4.44562418064564	0	1.38369757465475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132610905-7	38.7210629393439	-0.00293403064196215	0.423971211810404	-0.00692035345851318	0.994478400892941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00235255390206	3.66347698331388
Merged-chr10-13686251-7	39.2215557202233	-0.991264928482138	0.390000994691171	-2.54169846224902	0.0110315298361112	0.214702087490572	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78012349622442	3.7947940938656
Merged-chr2-168478100-4	11.6484553993326	-5.84942585816819	0.994632563877129	-5.88099170548653	4.07815605139184e-09	1.02158748754659e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6175563688136	0
Merged-chr17-26534078-10	94.6705980613977	0.457538464054319	0.264314554448944	1.73103772135522	0.0834450368433209	0.814958478243584	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45276447291334	5.94593264148382
Merged-chr6-146222872-3	8.37924924978843	0	1.35936629475213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70797181-5	17.6369108733862	1.16661646067012	0.64730664208306	1.80226245928189	0.0715041219293715	0.741490378473618	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85502169613206	3.13330440210622
Merged-chr1-80630457-4	7.60230304846104	0	1.35694908858991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12500764-4	9.68084981577281	0	1.34951677630395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116683934-3	5.31058315869588	0	1.36576248381628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128716177-2	5.42491886545544	0	1.40455583305739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108068117-2	6.22699598001929	0	1.38133482229274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87676448-2	4.06503323781635	0	1.4223741340847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58672170-8	27.8177271049813	-0.668828351802003	0.41758117649564	-1.60167265539803	0.109228014994037	0.962009991422696	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16308914338844	3.6810056070557
Merged-chr11-120071263-4	12.5253720171506	0	1.36472291142978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17919251-3	12.4611047509645	0	1.37689505247966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84606728-5	14.3943577226974	0.142185795386228	0.822846784995451	0.172797412566926	0.862810670923323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.6776376524744
Merged-chr10-8362286-4	13.7803194372127	0	1.36543691606888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93168217-8	24.5687260935249	0.366971884748737	0.410754532389142	0.893409215996366	0.371638069097482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28585630814522	4.40873853819898
Merged-chr1-151583700-2	3.70483918148093	0	1.39086552787629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96658970-4	9.28947250236993	0	1.34850389164632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78235904-4	9.06701481952269	0	1.38552201241145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34776977-4	18.5243582405226	0	1.3569283807468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97942588-8	24.5986838350087	0.0587187021972891	0.363534196284352	0.161521812246131	0.871682433222269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89384765959831	4.86192731119582
Merged-chr11-76479624-19	118.118125098692	0.255048065549933	0.17481708689274	1.45894242996063	0.144580953616229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.84503881597158	7.10024396981455
Merged-chr18-38003394-6	30.0506776476512	-0.390578981247717	0.51471294596135	-0.758828749718383	0.447955005187353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52511964756407	3.00833043745248
Merged-chr1-159187014-10	79.3682091767756	-0.198556319486234	0.22835567782108	-0.869504631462705	0.384571175927548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.09012173955488	5.89458374527738
Merged-chr6-134263526-4	14.7103583690444	-0.234267039156169	0.758070910423989	-0.309030508801799	0.75729831924778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79911208219892	1.91189215097434
Merged-chr9-121904584-4	8.63833986169135	0	1.35795974554698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120957957-4	10.0137385407157	0	1.3534566044069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8981825-8	34.9785771388107	0.969133102866979	0.414451719599672	2.33834981744819	0.0193691086934231	0.313264360070601	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88778723693484	4.89299263267057
Merged-chr18-53250257-8	35.4898824924752	0.0151652132703472	0.333203170696267	0.0455134122483221	0.963698084549072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6500458928975	4.69383032330435
Merged-chr2-155473920-7	25.4064817008332	2.96071777047919	0.879962407657293	3.36459574263116	0.000766558832023755	0.0291598121413431	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13289677646175	5.35874027800237
Merged-chrX-17591036-1	2.70560205032362	0	1.52828461989051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19629812-1	2.49483335228399	0	1.46147996683405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31056749-2	6.97560387373898	-1.53482798428479	1.15835003655594	-1.3250122465988	0.185167089472736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43750690265746	0.601513806634888
Merged-chr19-32782209-1	2.20508351230489	0	1.47081895538073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123376839-5	34.3865803885442	-0.129993630022983	0.417629545768565	-0.311265405764707	0.755598864085442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.108914230107	4.04436817297318
Merged-chr15-85645378-1	3.01900122415939	0	1.43707627605611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11746055-1	1.46446868573865	0	1.57647325185124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191881368-2	2.25732491222207	0	1.54300626808749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57575021-2	2.70253886645386	0	1.56831158775856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70832228-1	3.81734659150863	-3.14375373042444	1.311870961477	-2.39638944891728	0.0165574873634154	0.284602769494729	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87185071153905	0.577068348605183
Merged-chr8-61573504-1	5.93473859619569	1.63154024192376	0.968874869084657	1.68395351555063	0.0921906526692122	0.86377260309693	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65215194967867	3.00961139038454
Merged-chr4-128628361-1	1.78285377542147	0	1.5560681667159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111159829-2	7.65213686568011	0	1.35981721313064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41038915-1	3.96816088971797	-0.344451941831793	1.52381788158816	-0.226045347015351	0.821166151134254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16887138725642	2.87838105263654
Merged-chr2-153773498-1	2.05512404781602	0	1.42230232975453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53170846-2	3.17478461177266	0	1.40821154387732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87256456-1	4.09395342083796	0	1.3823657962247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159619076-2	4.00775391558904	0	1.42009562942939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82741609-3	11.230374184346	-2.00170037338872	0.843934338390305	-2.37186743367583	0.0176984394583998	0.296294878509133	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53862250190241	1.27277412794229
Merged-chr18-67195119-2	8.48989860226038	0.820214826932581	0.885296249815715	0.926486277450422	0.354193325276373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50282389800248	1.62069611143677
Merged-chr4-132620181-6	30.2511028993522	1.57593295916161	0.40125142433493	3.92754483494657	8.58174265958419e-05	0.00517752440879397	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49716289840511	5.83204264800854
Merged-chr7-122459752-3	5.6972572447181	0	1.36364801472521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59236129-3	10.1066911677774	0	1.36903847923217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76679168-2	9.27762180100066	2.25956964346305	0.900145424633532	2.51022732730433	0.0120653462071309	0.229161479550464	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	2.6967690227239
Merged-chr9-90184657-3	14.6091915163328	0.355583480614629	0.474456552734124	0.749454251533735	0.453583462598454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83666162243557	4.13858980696022
Merged-chr10-30660775-4	7.41162682666323	0	1.35461707233662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84135548-6	13.5837477149193	-0.36244937894079	0.951319792156218	-0.380996360981073	0.703205948783466	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19454903376793	0.990331813111976
Merged-chr15-80634967-4	11.2505183217874	0	1.35124391242698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171038574-2	6.9627505685932	0	1.35512646197476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108702839-7	22.1619081493845	-0.243934580767931	0.391630293027277	-0.622869540765941	0.53337025550555	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96119499882663	4.703990590208
Merged-chr11-76253332-5	17.695061310545	0.525430124490036	0.473677936594569	1.10925606598342	0.26731973216312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22399548585317	4.45306301233267
Merged-chr11-69409748-8	86.5048048791143	-0.184059702260905	0.32754753118724	-0.56193280283248	0.574161803198514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94838387602066	4.77220441766611
Merged-chr10-83922233-2	4.42473703015594	0	1.39912894810475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105500477-3	4.91532431531088	0	1.40277848720931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39226720-4	7.6664442489827	0	1.35801747171233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54449056-4	10.8773803247027	0	1.35780927783872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38198887-3	4.81043912895263	0	1.46222327772402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69258533-4	7.1143523903207	0	1.35379549753563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6705763-4	12.4937715997447	0	1.34922227608898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-141066010-3	14.7840774187641	0	1.39307551837152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7906678-4	7.30605770262169	0	1.38636150642486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75820103-5	19.7016263156475	-0.513785958863035	0.444030097288128	-1.15709714724505	0.247232672074848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85773820594073	2.77985136792502
Merged-chr5-104053155-4	6.48383314126342	0	1.3775253731023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23979719-8	31.0767387603998	0.667680524626683	0.380724013485848	1.75371266580615	0.0794797541538882	0.790845740852221	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88571446801982	4.53848169554613
Merged-chr1-171844284-8	47.6760522399158	0.286580229941732	0.411824943729101	0.695878756994976	0.486504761859916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36433470102498	4.04152313222988
Merged-chr12-40459997-4	5.77135780014167	0	1.36550295571471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39851326-4	11.4890251519667	0	1.37532388141094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117978057-4	17.3083352867773	0	1.48123317159027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79327786-3	8.94789404830691	0	1.36339410303438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3187645-7	31.9145085745516	0	1.36539410209731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45308139-4	7.23477897685876	0	1.36410744209333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129315061-4	8.2287420623959	0.945843307798331	1.03988571351171	0.909564671875531	0.363052136898205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.948471875794396
Merged-chr17-57109029-3	7.70722009638766	-0.0347553581104332	1.08910903037109	-0.0319117344005413	0.974542440708239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.20027794713453
Merged-chr14-51828032-1	5.66062245907593	-3.43621163402464	1.12016789811703	-3.06758624292019	0.00215795180918438	0.0660868182509597	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5421472809727	0.55634759613363
Merged-chr3-39269566-4	20.8298330920826	3.88740310043165	0.828968345516185	4.68944697521716	2.73944408221343e-06	0.000299624629507122	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	4.39394769043408
Merged-chr14-62120478-1	4.35260226777731	0	1.43622205407314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145871782-1	2.78488928796581	-1.05758364581643	1.18672877444065	-0.891175531085366	0.372835009232992	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	0.67591700901439
Merged-chr14-14863944-3	8.118123769185	0	1.34846538832088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19104022-2	5.77039687050258	0	1.37785153004221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20469537-6	23.5083910145516	1.27455324480238	0.628620672644969	2.02753950079242	0.0426072690242326	0.528816464943781	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	3.29587527597301
Merged-chr11-103406005-4	8.49775934091841	0	1.35236125941568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10554413-4	6.59690919137224	0	1.37802922362019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90894486-6	33.2319989124658	-0.28119426555209	0.450563733123274	-0.624094317584933	0.532565645520859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63068143299972	3.62016303870044
Merged-chr2-121509779-4	7.40273227920854	0.626346068368424	1.34579383667719	0.465410118027361	0.64163778980394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr7-27545221-4	7.95473748037334	0	1.36331470947996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-28188335-2	4.61784904659701	0	1.37017607797781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57995821-4	7.43869764800757	0	1.34800425651515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163736102-4	8.94440336201679	-0.0345048056786289	0.83976469619682	-0.0410886595196207	0.967225215362242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81534621159246	1.70266130792036
Merged-chr2-84460132-4	6.55619618163333	0	1.35591665516743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111115901-4	10.3506622382729	0	1.36077165273393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7924451-4	8.51493685057159	0	1.36359439104713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59612004-7	20.6044657034136	1.46096755254729	0.46175894783298	3.16391822920502	0.00155660523131838	0.0509118554568207	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05466924690411	4.48125131353239
Merged-chr3-81149313-7	33.5297384168014	-0.629151648729775	0.402918191817595	-1.56148732300128	0.118408812629997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44349702423742	3.8519033644669
Merged-chr11-20937145-3	6.85531254137544	-3.95308410517903	1.14873467497663	-3.44125078774997	0.000579031586147873	0.0239540167362346	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89928934249206	0
Merged-chr10-26836823-4	13.9454749426567	0	1.35342454002243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131389010-2	3.44456134819636	0	1.46876238866255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43250891-4	11.5080486423727	0	1.3486518764402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123461985-4	28.9014891081296	0	1.46003962245527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118900588-1	4.45716639523469	0	1.3800564404598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95341122-4	9.49220020009157	0	1.35756687980403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143888682-1	2.62294170418874	0	1.42051587234796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71489885-8	27.9134060048465	-0.0898077456170087	0.389009137871283	-0.230862817538041	0.817421377765473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76410459415418	4.54896993954799
Merged-chr19-24432479-8	31.0159664731732	1.3106229814922	0.337768888394229	3.88023594394074	0.000104355183638923	0.00610618237613374	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09907417497357	5.53929407232205
Merged-chrX-159779009-4	10.2946761848519	-2.55590655533245	0.909897421934161	-2.80900516225157	0.00496948497325555	0.122564691840735	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64543441043658	0.67591700901439
Merged-chr8-83749488-5	39.3963310385418	-0.00568330452117214	0.275765399636431	-0.0206092008956345	0.983557400772429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0800874149423	6.08696917758451
Merged-chr5-104938110-1	3.67806780581827	-2.37282213392939	1.35009880701397	-1.75751739176586	0.0788296600775761	0.788137114614118	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	0
Merged-chr15-59654628-4	7.79355489787521	0	1.35614576245345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31293979-4	8.68613615233481	-0.680253520392994	0.750791354584523	-0.906048686148546	0.364910083673779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	1.39207274064238
Merged-chr8-35679231-6	32.5871218548574	0.189961344237391	0.357342898866117	0.531594009116051	0.595007214952965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66644875451961	5.94659246607755
Merged-chr15-62392585-5	35.1008885378026	-0.00435336286518081	0.533105406255811	-0.00816604524001364	0.993484510993721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63840556523641	2.83135360506298
Merged-chr8-125528090-5	16.0288538699179	-0.39817349429455	0.682787579811492	-0.583158666132269	0.559786493584508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75271604137506	2.07771909425719
Merged-chr5-143470865-5	20.2661265653637	0	1.33547435563914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75677134-5	26.1955725295044	0	1.33628379897899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88705312-3	5.72663508283473	0	1.36438624435619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34262508-6	20.0048130352097	-0.0352882785482969	0.413397037846124	-0.0853617111824396	0.931973832069872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48011354275022	4.47282856032523
Merged-chr18-77800127-4	11.5550772093433	0	1.3522432925103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5576841-2	5.36504626680325	0	1.36790583017522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-28413803-4	8.9195392695272	0	1.34597443900697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75609677-4	7.95744588702719	0	1.34861985792826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126573314-8	22.8519220928033	0.478543921627464	0.563361323833316	0.849444044847232	0.395634253533716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27874693941374	3.21511277605812
Merged-chr10-21611186-4	7.90924880664847	0	1.36031367488687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125348397-10	30.5503363599978	-0.10994864376734	0.326168774070297	-0.337091262278969	0.736048104054098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49773954204413	5.38005033460829
Merged-chr19-9936763-7	32.706531987296	-0.513553712666133	0.334892736330889	-1.53348716455504	0.12515586679687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77889945051343	4.15706133595614
Merged-chr18-38929597-4	10.7187812567996	0	1.38966687318358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150981553-2	3.81677048754801	0	1.43340897906233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43072552-3	8.4697337937347	-3.25510056635898	1.13829120554268	-2.85963780666048	0.00424125100070123	0.109388050337126	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56070666783485	0
Merged-chr18-69627812-4	6.07613171438127	0	1.40453373995801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36578668-1	6.48384346593244	-1.74037972993632	0.786235859895262	-2.21355933850201	0.026859107058223	0.394284148144193	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69783950918948	1.84249433723732
Merged-chr4-149462470-1	2.14689054246513	0	1.5072778362094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94609416-4	7.64814238080998	0	1.35123561287967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28827930-3	5.15605963413427	0	1.37660074465365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57639262-1	3.81630896026749	0	1.49182816252538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80747606-4	6.70871703946252	0	1.36034610482849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119836689-3	12.75396507404	0	1.35993178535145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53455683-3	6.08652934226152	0	1.40408906143126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29880229-4	10.5492774238293	0	1.42786465056022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103719959-4	9.02270166564112	0	1.36807786272824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128097382-1	3.94527710883545	0	1.39591650296196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72163351-2	6.90480683602792	0	1.39848003207983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72853366-4	10.3452336804533	0	1.36448072454736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122844019-6	32.5949753248399	0.0729511510436093	0.380302017272373	0.19182425475109	0.8478798712253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34961638163778	4.71705160751652
Merged-chr1-171660679-8	27.0935141910662	0.234267377387922	0.359700972032285	0.651283692852782	0.514863373063762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50637233835556	4.73868171926106
Merged-chr10-82901448-9	49.6469593532512	0.2128967835416	0.246480845022423	0.863745754856663	0.387727572692127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.21503851465827	6.53362061279015
Merged-chr7-16299832-4	9.69653855154808	0	1.36028154284422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118100798-8	56.9352166535222	-0.22259388925464	0.298724209128901	-0.745148476260891	0.456181966482789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89248415470884	5.71990492585982
Merged-chr9-111552025-7	19.7345681807994	-1.11368942930522	0.415442796702148	-2.68072870235293	0.00734620467212038	0.161804027460207	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69120683874514	3.07736993534207
Merged-chr7-44983280-4	6.83748083388637	0	1.35129942767542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118275250-4	11.0931757917222	0	1.35344644840726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58443944-4	7.41712116520953	0	1.35599609139209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111778718-2	5.20412408256399	0	1.39359426863475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13659305-6	17.0964191443169	0.479901453232465	0.54619513008884	0.878626386058052	0.379603884298385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32198339548792	2.69459663907441
Merged-chr6-97820475-5	30.582821464916	-0.0827907318178137	0.355322056524296	-0.233001949351694	0.815759892062528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72795495050918	4.66429412258183
Merged-chr3-144695462-4	7.84380265690187	0	1.37160713110095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96758005-4	7.00856249938817	0	1.36756250916783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89807337-4	5.46394826615526	0	1.39344007785075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43861360-4	7.32589465793961	0	1.36591330517791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106813460-11	53.3108339699871	-0.766690611959531	0.335483063071566	-2.28533328907868	0.0222932924112526	0.346537341201967	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05309911423625	4.09618173187703
Merged-chr6-17655295-3	4.49908544720592	-1.91113526073732	1.41574332385139	-1.3499164915984	0.177042771095367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr6-97523296-8	27.5467845227426	-0.129053409525288	0.385635211710808	-0.33465151937958	0.737887976592072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59754178092099	4.89039632856117
Merged-chr5-105496784-2	4.99068248036553	0	1.38051274446229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28432586-4	6.31077847666731	0	1.35465771306871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97442177-4	9.04602675751831	0	1.34839248211788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39636361-3	5.74832589452557	0	1.36244517917531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24682113-4	7.00915449437784	0	1.35670325368047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76175210-4	10.6428808199179	0	1.35873661121934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93370500-7	34.5822195438866	-1.59420554596927	0.409411984543661	-3.8938907656702	9.86490853737472e-05	0.0058035342335839	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95032861447387	3.42558517843263
Merged-chr7-90041691-9	94.43501795604	0.127561799551676	0.254851498246513	0.500533841979958	0.616699233130199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.00248916930986	7.12304518106671
Merged-chr7-114086280-6	18.4825557631426	-0.159784834082866	0.470008578244135	-0.339961527255082	0.733885500953789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63332847664779	3.45583624514549
Merged-chr10-30773449-2	4.92226696850219	0	1.39611655846174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46772998-1	2.43014919966856	0	1.40988946738271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84209684-2	3.35069826379101	0	1.42085588392665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95795018-2	4.55167921193924	0	1.37139702239229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32657424-1	2.50200019890657	0	1.42157504665673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79196861-1	2.6932200946496	0	1.51532556866618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19635521-2	6.54941007290618	0	1.42171423845631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47255312-1	4.34616192895353	-1.06600553399198	1.08623543083098	-0.981376139771544	0.326407288001944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37528155229931	1.19104000664357
Merged-chr12-81963323-1	1.62416244647063	0	1.56692324365619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20390802-1	1.92674013293353	0	1.5428106955505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41684178-1	7.13051646512776	-0.502013284106715	0.634034986580777	-0.791775366867326	0.428491667956991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28907101520903	2.57526114728847
Merged-chr7-27507078-2	4.18252037141246	1.12820147783745	1.15718102751264	0.974956770819618	0.32958170370489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	1.03838943879457
Merged-chr13-60683512-7	41.0315829781532	-0.0543601225236165	0.371627800641511	-0.14627571572896	0.883703735683313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87943350479425	4.79535214111673
Merged-chr10-98517812-3	4.50507457720875	0	1.41417301319824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145289523-1	4.66137697099953	-0.917551482598181	0.963333779805688	-0.952475146032207	0.340856064840908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40790914314352	1.30064958020929
Merged-chr9-37468456-1	3.71427924441251	5.31194827411059	1.19463511740439	4.44650269921076	8.727957093735e-06	0.000796045334997217	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.94752347856757
Merged-chr2-167146091-3	4.63016129366027	0	1.39218076145986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34311990-1	6.43291416306673	0.249350426887838	0.737983240268722	0.337880880326011	0.735452956393421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08599165013949	3.44717560617489
Merged-chr16-94581723-1	2.04233649359549	0	1.47968632126073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34272370-1	5.37788512156389	3.11125469869024	1.13352002387593	2.74477259612203	0.00605528410961519	0.141270038160761	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.8773219419536
Merged-chr5-90685904-4	9.94381558893073	0	1.374619369573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15233894-3	10.7465402187919	-2.74721630503855	0.804042101124067	-3.4167567857428	0.000633718673702349	0.0256311855534122	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75585758053167	0.953310774576147
Merged-chr1-89524569-4	8.65974792602234	0	1.36308318329536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45665185-14	105.668718695234	0.0644065644644918	0.183421494757077	0.351139677221537	0.7254835626444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.36335914869932	7.4300905434104
Merged-chr8-67813796-4	11.3859866258348	0	1.35658079151435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-65019488-4	12.8788298207864	0.774377951406528	0.496624545694845	1.55928247630827	0.118929537425678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56210221426086	4.32241045760554
Merged-chr10-121370221-4	6.36630244418827	-1.8748358550881	1.27448616352077	-1.47105234152473	0.141276962272098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr14-77348975-1	6.29312195625261	-0.85721312916342	0.821960310613549	-1.04288871140695	0.296999838467718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32021347423954	1.43811874863432
Merged-chr11-63093515-2	4.96058858657746	0	1.39131378821037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161976578-7	27.2879819072058	0.248709561947194	0.315584468428171	0.788091895605445	0.430642955347383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39505192843406	5.6594914401539
Merged-chr2-18992775-3	10.5262424623768	0	1.38345625835897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16960633-3	5.79055986144063	0	1.42303007364682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-81571756-3	11.959394933886	0	1.35069517052791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3825160-4	6.79803254641733	0	1.42002579715506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41319253-3	10.0967449649819	2.34410731876641	0.81044094680835	2.89238509973847	0.00382328998701524	0.101727959081821	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17347279658369	3.39708968948789
Merged-chr4-150138289-6	26.5554199141781	0.346928421756335	0.634834525452391	0.546486380067483	0.584731647443086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	2.44019262356817
Merged-chr18-77868590-5	8.38483897346212	0	1.37418508436957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100943494-8	31.8631269247351	0.0653829664340294	0.31488920928876	0.207638002527015	0.83551162925938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24735824889366	5.29424382273092
Merged-chr14-76755821-10	108.304551947096	3.09171369016366	0.346384024515244	8.92568210814698	4.42960961915496e-19	1.00328812203185e-15	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07571213568992	7.13124916265862
Merged-chr2-68502456-3	7.05127583467637	0	1.40211743507186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79174281-6	22.3368718409179	-0.24509319254672	0.441414210006072	-0.555245361365573	0.578726845788217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78099099430026	3.43070904441914
Merged-chr16-77602781-4	9.52423778505423	0	1.36966895125653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6479180-2	8.29846261002694	0	1.35853354707767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147992734-4	9.20120855057888	0	1.35153137528209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-35152047-3	5.19015388486302	0	1.39848170764001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55853534-3	7.90151496342577	0	1.35962226352294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-62940776-3	5.57848089158072	0	1.37298661328824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47900723-6	16.4755524518359	-0.73060003127667	0.669653226136848	-1.09101248640497	0.27526738834187	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90676096711236	1.92385917873864
Merged-chr12-51848176-4	7.75192423630497	0	1.35941801106756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60851426-4	18.1955021579227	0	1.35107648634427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4054627-3	5.81396761749906	0	1.36263673090026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80985770-4	13.2977736136015	0	1.38366741143566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77537657-5	24.2186915749894	1.91393113799802	0.499587722424275	3.83102116423233	0.000127612526800255	0.0072184072261551	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96691840175541	4.95988545069476
Merged-chr7-104258902-1	1.72229191486281	0	1.57615715601869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-114233278-3	6.58146245000551	0	1.35930256670641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57706871-1	3.62620367241295	0	1.38624487405169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118841400-1	4.8857571622132	-2.33168671861275	1.30643871978261	-1.78476547219968	0.0742993660636057	0.759483953055552	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	0.303163067301871
Merged-chr12-118758236-4	11.1764867260269	0	1.35541804600194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140831649-3	4.89830688885749	0	1.39210451918136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71159696-9	36.2350693588583	0.544091646513707	0.352621635292446	1.54298997014879	0.12283320948475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08165296794787	5.5955734930918
Merged-chr9-63793879-4	6.69764466404451	0	1.35464379821949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17569476-3	7.44202194445336	0	1.38219592751763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20701618-4	6.81487314495123	0	1.35906307209017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66473181-7	33.3229584566334	0.981876751327021	0.321776441849105	3.05142522455844	0.00227757770138013	0.0689622765016501	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39742078296426	5.2429774134062
Merged-chr8-39620592-8	42.8888857738742	0.716008635527903	0.36630231984952	1.9546931502428	0.0506192990685487	0.594044576439387	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56511512580739	5.17530982951653
Merged-chr11-20960297-5	11.3156128895705	-0.745651352606599	1.02264887302456	-0.729137216375432	0.46591773130101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52861812840328	0.577068348605183
Merged-chr2-29632371-4	9.29302365288297	0	1.36406750900658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88653770-4	7.56526030900982	0	1.39498281027907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26996280-4	14.7130947749284	-1.08448333144514	1.02175481361339	-1.06139292616583	0.288511370323603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.577068348605183
Merged-chr15-58144742-5	25.0188385375462	-0.890421028397688	0.371577223497304	-2.39632833255224	0.0165602487152418	0.284602769494729	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96777374924001	4.07170894536224
Merged-chr9-106306905-3	7.08429228032818	-2.12279573711698	1.23129863288431	-1.72402996350637	0.0847024341046057	0.821470047367041	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr7-19841509-3	6.74198594474138	0	1.35960976253686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100705897-4	5.4267304158329	0	1.40184670595071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122466018-2	5.25142235230913	0	1.47314365311713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-95881117-4	4.49361959937893	0	1.40740530187802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72942554-1	1.92733511709456	0	1.65995422214134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-20943440-2	5.81486848680993	0	1.38892626489373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16207302-2	2.58782876582738	0	2.00595100286693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122257148-1	3.51438547286836	0	1.42105164874405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48388646-2	6.95050533797959	3.75308273383067	1.16299919370459	3.22707251573898	0.00125063760662589	0.0429459315594293	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.34502298933502
Merged-chr14-121279319-7	26.9875154473393	-0.0940528556717837	0.361809430327691	-0.259951366073018	0.794901288427279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24309033344258	4.99914555910588
Merged-chrX-163867909-3	6.63252054973023	0	1.36999277913218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91517179-3	9.14431838542559	0	1.35213989583403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24360947-3	4.89346813861188	0	1.39032358380734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94045364-3	10.6621997663591	0	1.36060797452737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53474318-4	17.0306349033535	0.176277567144468	0.609917448628504	0.289018731208388	0.772567043525404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31447273151311	2.4561184030503
Merged-chr2-120663845-4	9.28829979563605	-1.46252485474718	1.10341395006093	-1.32545438152783	0.185020490308279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	0.465515277017237
Merged-chr7-5083499-5	17.2845059218667	1.00161002603739	0.541199407183961	1.85072269618531	0.0642094571813902	0.695152735097229	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7337995627857	3.88869750077239
Merged-chr4-53469277-8	28.6934767268446	0.124895877452402	0.321728285663539	0.388202974428604	0.697865832172027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54151678129613	4.59955520237006
Merged-chr11-74568907-2	8.05829323502916	0.782652768001121	0.918042215024233	0.85252372406476	0.393923477319507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.97731223551783
Merged-chr15-64189441-5	18.4559981769452	0.245215578886937	0.473325693015418	0.518069444582104	0.604409818101186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3009007084372	2.82791325953938
Merged-chr8-36149567-4	15.8365588262998	-2.19133276562135	0.51955549553963	-4.21770683677468	2.46799400386458e-05	0.00185813969606751	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76361107964957	2.77669505248885
Merged-chr6-115879939-3	6.73798685214326	0	1.37189180408385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71195918-7	23.0307308994353	-0.202665644483164	0.394641840293623	-0.513543227784403	0.607571380638444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3323502663521	4.2690731124384
Merged-chr5-149284983-4	11.1642004527161	0	1.34311493149662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117712292-4	8.31476050291696	0	1.35138875453135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131937870-4	5.91806587726967	0	1.36057835070573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-12044752-2	5.49074587126224	0	1.41113671249204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140737431-1	3.16367071393667	0	1.44887862481702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36496978-4	6.27793149661598	0	1.35066369718659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126917697-1	2.56270598464017	0	1.42892457670608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32122585-6	35.2265450560549	-0.402544050121788	0.536780278548524	-0.749923322835711	0.453300886810312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29592793539725	2.37132011681132
Merged-chr10-8945305-5	12.4747385050268	0.763461684677553	0.807106573345574	0.945924255718663	0.344187220872455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.28311275482176	2.4926420445116
Merged-chr17-44351554-4	10.4657662341489	0	1.36980634311039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70284753-4	12.3821665753973	-0.437029664410009	0.650502681063102	-0.671833763537732	0.501689531581077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41120696668619	2.52668373719919
Merged-chr6-85369637-4	8.83726582846854	0	1.35775541693095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96770134-4	8.03593825920742	0	1.36443066996546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53876174-6	22.1343311999376	0.712329997317756	0.492274073266139	1.4470191220748	0.147891568017405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40696885927468	3.43747150341044
Merged-chr12-34701726-6	16.8092065998222	-0.442967526141465	0.668015429342464	-0.6631097227462	0.507260284112214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75275814396443	0.988408630094828
Merged-chr11-3144283-4	27.07652199022	0	1.36908226732275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-70856072-4	12.5270386993677	0	1.35102295899658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14378797-3	5.264966172825	0	1.38729756239397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121280366-4	7.81339680461887	0	1.37458439963863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50088912-5	26.020873970396	0.0185384890121051	0.439599641233956	0.0421713015053142	0.966362140281628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84033573793404	3.75495431116612
Merged-chr3-59228861-8	38.8987184004295	-0.404403112312871	0.344966651372361	-1.17229625154796	0.241078136038593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60372557979738	4.20681861574764
Merged-chr15-99001684-4	10.9384739148959	0	1.34568638044366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90747249-3	8.2516953161248	0	1.35103823497299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3667694-4	9.74518403209972	0	1.35047475170005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12818671-4	8.0092922310368	1.16039456429291	1.13237686073348	1.02474238438719	0.305484758461261	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.27673210875742
Merged-chr15-58682172-2	6.41454541621134	0	1.39860383411478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115523066-2	4.95241900447446	0	1.37868885777876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87509304-8	32.4793808036043	-0.353648385445526	0.407705818304464	-0.867410690669688	0.385717026346597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05177859707779	3.61053927703223
Merged-chr15-103313584-4	10.0863563584509	0	1.37902266309884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30137144-4	6.8235452986004	0	1.34962811668793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25301183-8	23.6407876661386	0.450026534991305	0.416616303509975	1.08019424876043	0.280055688918565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09368297217468	4.6409970931652
Merged-chr6-72023839-3	5.53955859828861	0	1.3916364092145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122534621-3	7.08314462462136	1.34077591362028	1.098372617646	1.22069313462475	0.222202228131077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.25298535761957
Merged-chr11-111093102-6	29.4603781607322	0.0924303189819701	0.428413507677792	0.215750244391189	0.829182434047976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22458026584382	3.55554824537223
Merged-chr3-139012597-5	16.7096165517804	0.409943230351598	0.444984076363446	0.921253708001838	0.356917983632422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54066964309322	4.0707009923997
Merged-chr9-89259104-5	15.4901551425706	-0.0374937168706103	0.517401973335743	-0.0724653534444111	0.942231576900645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82754570620699	3.79140266607138
Merged-chr7-31158779-4	13.0642083626588	0	1.35692291350733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94413196-4	9.87808195461041	0	1.3608419117556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9182060-4	8.12546655649679	0	1.34597646872391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112895991-4	7.2146525910659	0	1.37119477943098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57432608-2	8.30448706648244	-0.797603390365066	0.835201350370225	-0.954983358218359	0.339586112842281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46863827486572	2.16685274122719
Merged-chr10-111159947-6	23.204331373406	-2.0301181733176	0.458187245510987	-4.43076098954596	9.39011219487768e-06	0.000840917806921509	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75484998590914	2.56268146380726
Merged-chr18-70478018-8	32.8631052161751	0.135285216728436	0.284621516578696	0.475316196592012	0.634561616424434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73806115408827	5.86321807728735
Merged-chr1-80716224-4	8.52013587618358	0	1.35481134615666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19674474-2	2.8651634954412	0	2.10454025327641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11718121-1	2.27760465079618	0	1.4785886410228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14178936-1	5.92799426879224	-2.42283561417448	1.02368618846537	-2.36677571845197	0.0179438030843354	0.299021211484178	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09470639183464	1.01466627894101
Merged-chr11-6188069-1	3.46451791836329	0.0274020541813053	1.34019602547924	0.0204463031230873	0.983687347008174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.600815099743027
Merged-chrX-13306388-1	3.66946458964986	0	1.42706853315824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64399315-1	2.03637762461876	0	1.49820161540611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74921700-2	3.76055467767195	0	1.42780518760385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26612347-1	1.47004086828007	0	1.50624035628145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59899872-1	2.93659616122975	0	1.4300696538509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56439575-5	41.3039511782987	0.228937669271263	0.473140439534304	0.483868319301978	0.628479325290634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79398057630762	3.51480325892926
Merged-chr3-132154428-1	3.15231056811797	0	1.41901977710995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34528913-1	2.38505984890979	0	1.43345722535381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94564146-1	1.69708431099828	0	1.58034197856633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40954195-1	3.97593131187572	0	1.37646242686021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159646805-3	11.4848193647296	0	1.35563895131106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8788810-1	2.44134746823213	0	1.45554027116304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44024945-1	3.18635486004035	0	1.43364257180809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116416392-1	2.53448647860728	0	1.48322449184978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97373385-4	10.5548092702529	0	1.35203134258803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21135180-4	10.6827635090347	0	1.37308555262156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81579904-4	6.10935142123217	0	1.36889414012804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40708388-1	1.6487598043585	-0.0345003869081235	1.58591553677596	-0.021754239811699	0.982643996878961	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr1-87608561-4	9.84808982113235	0	1.34120601997514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21361303-2	5.9840635767622	0	1.39371922537634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144452847-1	2.42226605083798	0	1.45579809287448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140112387-7	17.2127358413808	0	1.35491828360436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173809499-6	20.6351092477761	-1.08981751874819	0.427547066364426	-2.5490001089594	0.0108032266512884	0.211637414141156	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90964113409783	3.8875976062329
Merged-chr5-67450322-11	35.6187037435442	0.0459280734893206	0.391667920497942	0.1172627909657	0.906651810064456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00219281300692	4.07160857284942
Merged-chr2-52918337-3	7.00790709688253	0	1.41528965375807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37180761-2	6.20052253204613	0	1.38062046109682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-29960381-6	27.1957359012422	0.897777784183984	0.381330420096203	2.35433035727254	0.0185561114789834	0.304740683953492	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51309877300704	5.59232957453901
Merged-chr14-19904207-4	8.4452820558929	0	1.37059049869453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22024379-4	5.74960500634636	0	1.39919510087191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13982943-8	90.6073951088127	-0.000360814365690145	0.302052540632005	-0.00119454173414727	0.999046893819759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06101064628453	5.05660238106163
Merged-chr11-64718911-8	23.9219685616047	0.339160266615642	0.36250563439755	0.935599986409299	0.349479181571853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16765362083194	4.48171172827038
Merged-chr6-137694547-4	7.98321994210301	0	1.36299130029088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83303660-4	8.91936877682044	2.02157831901996	1.14087286773809	1.77195757405289	0.0764016000837934	0.772097895325325	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.60294768781932
Merged-chr16-48865188-2	4.70682884580312	0	1.46701304834588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34838967-3	7.9967455574119	-0.479726652598012	1.17354144521523	-0.408785437066545	0.682697128021814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.662147012823607
Merged-chr9-96759267-7	21.6418156748015	0.153409818405029	0.415210361426621	0.369474928029081	0.711773757747354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10740436119911	4.7913802205484
Merged-chr2-120134908-8	30.7507939038303	0.0368838791655064	0.277051187006164	0.13313019721762	0.894090413778134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52712120936062	5.56291818006947
Merged-chr7-48928565-4	5.92253016935421	0	1.36635509544533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19901295-4	8.62969067839161	0	1.34875774355415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10704333-3	10.0282606252305	0	1.36710817693506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21223050-3	5.15664614621931	0	1.40391862813321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-111999573-1	5.61170551414208	0.934623243849116	1.12465182940042	0.831033409110608	0.405954756158193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	1.56533893459231
Merged-chr1-66650211-4	12.011757145004	0	1.35715424573083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28528006-6	14.092432895545	0	1.34357359477459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45104443-4	7.51089869496559	0	1.36159777756286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141579126-1	4.52195401908358	0	1.36614897850027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77284409-3	4.74706294652136	0	1.42438657905255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72224611-2	4.67501903402806	0	1.39212674797656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-98054987-3	14.3990566863173	1.8238319059494	0.465464122294427	3.91830824029816	8.91726288061534e-05	0.00534436045123891	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47120376335721	5.35240683740406
Merged-chr19-23135566-8	35.4380668478967	0.267103522201	0.363364693405082	0.735083862160572	0.462288421946121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4546281707072	4.71800912613191
Merged-chr3-145952004-3	12.3035183711531	0.273576255437989	0.784913387264852	0.348543240409373	0.72743224596814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.6028325397791
Merged-chr12-32890710-8	39.8554402509154	-0.309375664041527	0.332792437196293	-0.929635500878424	0.352559839940838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65020966516654	4.37924793536616
Merged-chr14-47513828-4	12.8070405178504	-0.938780074425773	0.617421639467118	-1.52048456746027	0.128389234494116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3194495740227	1.97589395278844
Merged-chr1-184484957-4	11.1202783596749	0	1.35132137040586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85465107-4	7.01613020226083	0	1.3947184187918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48270518-3	5.0501476612633	0	1.38634874680961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117803468-3	8.90343280708557	0	1.36795981664313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136464534-5	13.2792932886336	0.902581617099074	0.64044558170221	1.40930259008134	0.158745713287484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	2.66126108421551
Merged-chr2-166492017-4	9.21554029802889	0	1.36081904857339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77174916-4	8.64551443489987	0	1.35897726097713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45795869-4	15.1381849441712	-0.951841218526151	0.666439885873456	-1.42824767650069	0.153220582264785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61593211585416	2.25523917505825
Merged-chr8-94551805-8	27.139310582614	0.525573312923075	0.37800357422906	1.39039244270371	0.164409740076112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17217350951545	4.85430239559743
Merged-chr5-72656795-1	4.8996752673504	0	1.38058908448593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3152519-3	13.8522161354992	0	1.35964806012444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87183790-3	17.7610227539068	-0.0277696302432039	0.734903889444104	-0.0377867509508072	0.969857708038478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97634481356229	2.25071844438604
Merged-chr3-149102368-3	7.10232054159411	-2.49150857205943	1.21863382573649	-2.04450961350401	0.0409032286676392	0.514927884933812	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0
Merged-chr1-52648323-4	6.70900901179819	-0.0359437731588956	0.925570081942922	-0.0388341994411096	0.969022578179825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.18984215491549
Merged-chr16-52059764-4	8.16673668970107	0	1.35958697261021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95888625-16	120.572320662176	-0.00656909462883115	0.18446217455771	-0.0356121499954235	0.97159162017253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.74887190673563	6.74405222382623
Merged-chr12-41315159-4	10.655940667091	0	1.35587460217691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20770944-5	9.4787131722567	0	1.34857012155469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88868263-7	14.7855512679837	0	1.33742121291912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36789624-2	4.90966459026701	0	1.40119689824843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153553714-2	4.09437724786144	0	1.42131005021741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91012705-4	7.66732369899549	0	1.36097121158267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59413404-4	11.2954516375907	0	1.3587633704072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62060132-4	10.5202069107393	0	1.37117225191237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136465212-8	33.3776312299856	0.211902129018522	0.357535098681401	0.592675040296807	0.553398648517751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7751334127327	4.31945825061273
Merged-chr5-66070033-7	32.8829285742192	0.361665558807377	0.504991528103005	0.716181438064851	0.473879323019951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26611452293889	3.12383463284375
Merged-chr4-105485361-8	30.4395024430614	0.495166136171361	0.390899113218053	1.26673640186834	0.2052495593105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42534054864078	4.98685921204276
Merged-chr18-65690842-10	25.7938395516081	-0.450027424595036	0.454657907017553	-0.989815458279629	0.322264327692891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6363135395374	3.82513687148845
Merged-chr2-58167862-2	3.85441216936117	0	1.4004752647541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125055414-6	38.8160782283723	0	1.33788969906137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11107960-4	11.4724858072094	0	1.35814868285968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143956942-2	3.12968061623435	0	1.42244712056682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106507660-1	5.40931165433262	3.92806410903307	1.08882701625654	3.60761080537662	0.000309029576488824	0.0149673211370517	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	3.39910211543756
Merged-chr1-37029308-3	7.53038808700944	0	1.37039785214016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4239628-4	5.95205202601254	0	1.36625631013824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75638350-2	5.57176970378334	0	1.41760537509283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38284076-4	8.84475358695308	0	1.35063491639652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53439127-4	8.42192171734516	0	1.36295932649039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59799297-1	5.83260884400522	0	1.37101600692071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22817553-1	3.75035526512527	0	1.38199781576735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117258061-2	3.05100463861767	0	1.43311596064046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116493964-4	12.7452945135729	0.122277418111047	0.44337813354467	0.275785856044538	0.782712547826529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97365286732077	4.12708442675491
Merged-chr16-45390000-7	20.7499174883833	1.11143774951273	0.459873204571212	2.41683520254031	0.0156561035466796	0.274178522130785	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18287165853229	4.41071921830926
Merged-chr1-24461168-3	10.401091121384	0.4145045834135	0.596777831675176	0.694571013554528	0.487324182993502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22380280121829	3.70349078466052
Merged-chr19-41764078-3	10.9105272641895	-1.03800118160666	0.55005203698282	-1.88709633237679	0.0591473699260067	0.660203671829117	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91858364560925	2.29777508138128
Merged-chr15-101198346-4	11.7231171888608	0	1.35249634295371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53149100-5	20.2307098227577	0.23886334349616	0.405999804748059	0.588333641304052	0.556308369203649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69899581190143	3.98474833915633
Merged-chr19-6268276-5	11.0008069108018	0	1.35363140865464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58250114-5	39.8701629161376	-0.00152172911136552	0.385864314847804	-0.00394368966709381	0.996853399058381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16104602898657	4.16302345747568
Merged-chr10-13941633-4	7.72485692268766	0	1.35898109406801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81132122-3	6.87376989225844	0	1.35470051139511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121053732-3	13.3214440337616	1.7006438306041	0.502301907641859	3.38570052140169	0.000709968180110526	0.0278778210301697	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09045752086053	4.97384597768664
Merged-chr4-119663184-4	17.9579987165943	0	1.35374399625405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103412709-1	2.62159450983201	2.84000997335252	1.336846350306	2.12441016329397	0.0336358608884173	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.44790810950236
Merged-chr10-88715904-4	11.2678208698326	0	1.3790989289632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17249297-4	6.75167061032759	0	1.3555087886989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133480657-4	7.16792526825012	0	1.38226235803888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36287621-4	11.6195523202153	0	1.35256910637806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116137875-6	18.2768849904904	-0.42736122277639	0.627945009593974	-0.680571094995594	0.496142921881734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87613034754277	2.45400387056762
Merged-chr1-136656778-3	10.2632618816122	0	1.37684515326608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-151563681-2	3.76879759423177	0	1.41022624426891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120776789-4	23.0621234278991	0	1.35253637357835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57591388-8	30.8093192967285	0.553929130925113	0.413055881752425	1.34105130902633	0.179903794434991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49985909124589	4.07091097759221
Merged-chr4-3929781-4	7.08033597419544	0	1.35263895767855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55506929-2	4.89703302418842	1.26995490188031	1.32900293158312	0.955569676861081	0.339289687486872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr7-136381046-4	9.90284491697567	0	1.37413325229318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61368651-2	5.06076670686696	0	1.40531834954773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28727310-6	26.072012915897	0.0298343108420461	0.34646313951189	0.0861110676422251	0.931378125600634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57728823790407	4.59589546828067
Merged-chr2-141033641-4	8.19647327290825	0	1.38555499966634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-124077747-5	19.9099395185682	0.614611191254309	0.642331765337911	0.95684383743809	0.338646082070935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09032553771468	2.54411136934882
Merged-chr2-22795381-7	18.4043155596315	0	1.34668050276449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76751230-3	9.20042748440485	1.65836436575367	0.539083703627689	3.0762650671759	0.00209611413124578	0.0647033890178246	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22201167303981	4.75443872076031
Merged-chr12-35054645-6	14.684420152405	-0.152759538861734	0.579327568123049	-0.263684221616894	0.792023254692219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09328727439587	3.16935301632508
Merged-chr15-101244075-9	49.1744919790182	0.420592190283498	0.280162426712643	1.50124410049779	0.133292437321582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15042841843153	5.5855162304231
Merged-chr11-61564799-1	3.85863318830982	0	1.40593886577486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10905304-1	6.12178878694363	0.8649664743533	0.877777808097914	0.985404810162181	0.324425267845536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96617270997603	2.50596298472764
Merged-chr5-29784985-3	12.2081772109519	0	1.35497711711745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59524246-4	10.1462766558173	0	1.37372604603504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35927640-3	6.30815560543109	0	1.39052496623762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-59214110-5	16.0569216556037	0	1.34816018995458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-80855215-2	7.25799765715648	0.90920169081496	0.761895587651118	1.19334158846881	0.232735621083475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	2.62095325081446
Merged-chr3-148988628-1	7.65713864210886	0.456830330688503	0.740912805865618	0.616577722873586	0.537513292048712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	2.02913165216847
Merged-chr8-84998043-8	28.7882879743065	0.596563368852273	0.395499394840078	1.50837997892132	0.131457304152114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21767067225825	4.81589463537686
Merged-chr18-82530303-4	7.20701012492896	0	1.36567801139703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5787246-4	7.45490866493993	0	1.35495066868974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12206521-4	10.1834741918847	0	1.36136354996206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21865901-3	8.91531016271983	-3.03607163715132	1.10825254165195	-2.7395124514001	0.00615303840809094	0.142815121616318	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24553328998514	0.303163067301871
Merged-chr7-121271403-3	9.63810116975626	0	1.35775602805437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108704423-4	9.16061219653238	0	1.34623882953633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152729728-2	15.4732093299252	1.34566283501231	0.517602078464838	2.59980183812907	0.00932776068761499	0.191393688241419	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17599020497327	5.57717349004953
Merged-chr13-65097233-4	10.5809377424785	0	1.36603342219324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-42978586-2	4.0841273498302	0	1.39977544020776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3155205-5	26.2086735133666	0	1.36344198118332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61384871-5	13.3147263505916	0.738958684457889	0.790967122505531	0.934247029278668	0.35017648147685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	2.33487789831018
Merged-chr19-11231497-4	7.38363508094346	0	1.35117464226687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55687752-4	8.53264494756998	0	1.37162595164339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10965165-4	7.1791944356073	0	1.35473011100139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106759247-1	2.0452001152849	0	1.46700811038203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152800213-1	3.83941130005869	0	1.40265163422635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-53753067-4	12.9741556809358	0	1.34753728940199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65111133-2	4.3058569391854	0	1.37380854405683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124859690-2	6.47658033302819	-2.35128259233274	0.897316923866041	-2.62034798385655	0.0087840082818518	0.184390231031534	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29793375498557	1.33245162145219
Merged-chr14-76858912-1	4.17546556520543	-1.47605834729705	0.917391153090937	-1.60897381920875	0.107622066468515	0.954013110300358	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97749077568792	1.41659105503593
Merged-chr6-149315056-4	6.57485979792235	0	1.43486126288847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55125086-8	20.428153348202	0.405768167213725	0.432552808254362	0.938077754832454	0.348204452826768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93544225206553	4.45938786826135
Merged-chr4-19919063-4	14.4729698108535	1.60432384115471	0.945531993422915	1.69674199531515	0.0897454493331526	0.850056260725012	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.42698818581862
Merged-chr9-77966421-1	1.99999328258584	0	1.41053472380165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44568191-3	18.5471597632714	0.307873493396057	0.460311169162749	0.668837764584427	0.503598973746501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43671865061578	3.76846358826614
Merged-chr18-35939689-4	11.8930659592601	0	1.34610598864983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120572768-3	12.4397086219275	0	1.36545167364941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53859404-2	3.40416229129229	0	1.4414330536667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90641874-1	5.53448656233726	0	1.37790526799602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-11407580-4	6.54538032757446	0	1.36257934563557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-68208-1	1.49180616749395	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32392957-1	1.77161156641428	0	1.45141762976747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105797218-1	3.64558895206924	0	1.47111315957233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-96358097-3	8.84410182261219	0	1.38477454636946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67631045-2	8.07337255756449	0.189376682509412	0.619188796002729	0.305846429605901	0.759721575511996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98801616977499	3.15072845593055
Merged-chr10-17576059-4	6.8726897574785	0	1.37128283395455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113637717-3	9.40553136917878	0.623097204722774	1.38187500908219	0.450907065130746	0.652056531258039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr7-121047658-2	2.48578538162654	0	1.50286189275199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12758958-2	3.94687790790505	0	1.44276270291057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83158611-8	61.2978130351536	0.0666114650351302	0.358397094419831	0.185859389130819	0.852555030016254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.1297602961387	5.19167189771402
Merged-chr2-128746012-8	40.4115600764261	0.528211543741437	0.332476105317097	1.58872031792377	0.112123549720304	0.975656161236752	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86423465048289	5.37898896951877
Merged-chr4-87368282-2	5.90386039752132	0	1.35266694341113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151142414-4	10.0174355082057	0	1.36857843152212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123287526-8	44.4948575052503	-0.85340816062301	0.336072552619287	-2.53935691555798	0.0111056462037281	0.215527248121549	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44440574451421	4.61132714609126
Merged-chr8-39308362-4	10.3921321986943	-5.18137204414106	1.05086411043825	-4.93058235853179	8.19848428075264e-07	0.000108170244421707	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0087374636683	0
Merged-chr5-97959842-2	3.32227841563091	0	1.37813464674116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60624337-3	3.94523846410278	0	1.42571663461399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131037202-7	21.2905026127695	-0.0147932292172955	0.552120416771843	-0.0267934833922444	0.978624450853305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49220702424193	2.72630444147286
Merged-chr1-135523258-4	7.50243879394067	0	1.35763947029346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98708376-4	6.14046420101647	0	1.37083444449314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20966954-4	5.86471638666086	0	1.3672805942868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79852940-7	39.1264703123001	-1.33692182579083	0.348504500337068	-3.8361680394307	0.000124968917794482	0.00710157821560743	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62498145988464	4.27630477541883
Merged-chr5-115535808-6	31.131746506844	-0.222797939896254	0.308642941646866	-0.721863065156914	0.470378671323604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73318941033951	4.63374524673865
Merged-chr12-17658628-9	50.7445544482834	-0.311615021227957	0.337612659138822	-0.922995666166133	0.356009463724654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93838590900939	4.69654139643189
Merged-chr1-177491161-3	7.64906401694969	0	1.34774180193468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67599538-4	10.4381973916783	0	1.34961597533501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86118761-9	38.0388496907012	-0.00391801023184272	0.299817040306956	-0.0130680038327088	0.989573538261426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.880597241091	4.99512813545244
Merged-chr14-62872292-1	5.31528965222167	3.11151715447554	1.30816684118501	2.37853235269054	0.0173817115558384	0.29297750650041	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.80335255482161
Merged-chr6-97452344-7	20.4140833879286	0.642076637936248	0.501107857101366	1.28131424969129	0.200083309739969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23943310347417	4.01691790727132
Merged-chr10-98954690-5	14.6348307555711	0	1.34100531088574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37718517-3	7.54826694488487	0	1.36434150498284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80722868-3	6.48587536436369	0	1.3483606882188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20108325-8	27.0929150787215	-0.458328386395479	0.325260593539262	-1.40911132642373	0.158802252216259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32993174439045	4.90142143358878
Merged-chr17-26437855-15	56.3993370084662	-0.170767614418007	0.283325397396428	-0.602726109227227	0.546690909458036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.57452494338343	6.36310443877695
Merged-chr9-44435945-4	8.68545783987072	1.78665269609862	1.24427525649428	1.4358982763448	0.151031289045118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr17-63826971-4	8.34108028844055	0	1.37043911063232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45120027-4	7.48259692849515	0	1.37534523153363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56101214-4	11.3686574504309	0	1.36300287061864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-118559806-4	9.527995510085	0	1.36718731444348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33886802-4	5.37469002196238	0	1.37944685454157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66250385-3	4.97503395367383	0	1.37038657878109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54644544-3	5.17320987562466	0	1.41445818084967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86545230-1	2.76217682998725	0	1.4202381332826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111640448-3	4.63288704175137	0	1.37156349702164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82974416-7	24.8223357930767	-1.96434275582233	0.589686518575932	-3.33116443049459	0.00086483500974376	0.0321117256111073	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03099157313391	1.62069611143677
Merged-chr18-53229407-8	27.8652747131262	0.495146603190971	0.370100182451636	1.33787181597965	0.180938226046199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20342156738683	4.71513566041388
Merged-chr19-60608660-2	8.72677304610349	0.169052472927792	0.766656798650074	0.220506063763419	0.82547705039604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57270279668386	2.22976310810453
Merged-chr8-40610432-8	30.3840741280086	0.166999665154578	0.386986854730353	0.431538340678111	0.666076980809087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58822182129435	4.73245001571478
Merged-chr14-31593697-4	7.73121574911953	0	1.37423372657248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48452414-4	8.8311463350418	-4.58533314364455	1.02656079151147	-4.46669420998758	7.94375485365752e-06	0.000733921135828655	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34005910040985	0
Merged-chr5-72552195-4	7.24356949795121	0	1.36367158637487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101548067-4	11.0548879879474	0	1.36709762625224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93230701-5	16.3495448542543	0.130443489440311	0.540643738555954	0.241274392243444	0.809342456725356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76048334404659	2.86079588693529
Merged-chr9-70239355-1	3.19110357207467	0	1.47840582930076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129756730-1	3.90214872287664	0	1.37611552635716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91362109-1	3.65903728574538	0	1.37163529685093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-36094371-2	3.95369934058511	0	1.43333306490981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3180812-1	3.12193228264119	0	1.43427555147126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32856864-3	5.37410188314295	0	1.36912056363892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65164303-4	9.23788900455781	0	1.36921354418471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93248874-3	5.89279046870873	0	1.38454183597973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114604492-3	6.47633577091394	0	1.37103147350208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-82888868-4	8.54967753533527	0	1.36765711728167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130291668-8	27.7344816150866	-0.247223591232764	0.34632968417094	-0.713838872415975	0.475326819551684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93067105572416	4.6224586205562
Merged-chr4-126553254-4	6.60673747946094	0	1.35455968503361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16307572-3	4.41652078636845	0	1.36932934930855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24826582-4	7.86994508903072	0	1.35914110534536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99616004-4	5.55473299012555	0	1.36816320436993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37660335-8	42.7529358523246	0.119217000055043	0.450979119336975	0.264351485342192	0.791509091209504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86414349527237	4.05860800931108
Merged-chr4-32353025-4	13.3332760566873	0	1.35079218129465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170545542-4	5.11996469208284	0	1.39632579038805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129936699-2	4.54901709009644	0	1.37908563511954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152886867-5	34.5713970031617	-1.90278917928623	0.425735312292145	-4.46941826141148	7.84326245674106e-06	0.000727562975914654	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18815717067415	3.44282631298786
Merged-chr8-68590734-6	27.3647734459639	2.34621842116279	0.406903603049169	5.76603009553416	8.11605724568919e-09	1.94352755867145e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82925595730773	5.70458114373161
Merged-chr18-39854775-2	9.10099400709723	0.115121429813281	1.21866044644426	0.0944655503911498	0.924739346843626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.723581231604105
Merged-chr3-30572471-2	5.22117893200758	0	1.41906712895111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8659907-3	7.92931306552314	0	1.35588722875955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62854151-1	4.09416242936793	-1.89694290428144	1.23592637138023	-1.5348348803036	0.124824392547113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	0.465515277017237
Merged-chr12-16869640-1	7.48535586681893	-0.643029656075798	0.663496216534728	-0.969153463201611	0.332468626126641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78846936301897	3.19890797284156
Merged-chr1-33964857-1	2.46772774061924	0	1.39946025684449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67145553-3	6.06753478487512	0	1.40758721927323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4207308-4	6.9059623681279	0	1.35924093161901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75069657-8	15.5593169910514	0	1.34762137682283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8619485-2	3.42664888120306	0	1.42528239727273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23887527-4	8.52206148078727	0	1.35063177882619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11664157-4	6.48806032267626	0	1.37291718027901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84201417-4	7.38059325936224	0	1.36098192391779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53826115-4	9.40137756992393	0	1.36269771323149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166412623-4	10.7354714603075	0	1.35607303095891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-39230960-1	6.0401645043965	-0.0346534210562996	0.70916106847692	-0.0488653743087244	0.961026583180005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	2.45914805170659
Merged-chr3-87515032-3	14.1612439214313	-1.77651157343113	0.74940278638597	-2.37056974660908	0.017760692596791	0.296940553866965	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11001010080327	1.85642398192921
Merged-chr13-24094998-4	9.62929666045663	0	1.36467765460613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91763964-1	5.25998190066945	0	1.38295304677771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33660667-8	51.9630696373015	1.84043220913104	0.37922000442359	4.85320443980395	1.21482341160243e-06	0.000150768460802047	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53594653207265	5.39392980632936
Merged-chr1-87651631-3	13.0310565159138	0	1.35325186194025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37230091-4	7.86296341273324	0	1.36003061892302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75529581-4	10.0639216981769	0	1.36456083017384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63803251-4	9.19522915072018	0	1.37262636892796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28654459-5	24.1487184303617	1.03801157498893	0.412063483158087	2.51905742055455	0.0117669465672191	0.224750333256311	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69358828237036	4.59536209162619
Merged-chr4-46557126-5	14.8918512053515	-0.575337923575603	0.610135866562588	-0.942966894926156	0.345697836294505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50361665125625	2.89482064302255
Merged-chr10-117397402-8	33.5142921634886	-0.481220164625436	0.307071691049198	-1.56712643546271	0.117085141220467	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53987419778546	5.01253552839812
Merged-chr1-135544978-4	6.16307169467342	0	1.36126489818778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102742761-4	6.16163403087703	0	1.3563989522545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71137238-2	6.31076434224353	0	1.36632744658584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88746475-6	33.814588403316	0.0443137105991639	0.412981345051084	0.107301966856838	0.91454942422699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73302905220518	4.79108592663556
Merged-chr10-41594619-4	8.09652678167884	0	1.36138949793795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98589094-4	6.42436722965556	0	1.3774755987447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90231806-4	10.0270547309341	0	1.35136922598397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125613767-7	25.6509703772339	0.0955368505807785	0.435278065781895	0.219484642326658	0.826272541870036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51445818748162	3.82054027357501
Merged-chr4-43466109-5	19.8990332346304	-0.0439929275743027	0.51656219601202	-0.0851648221916708	0.932130356766695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42571656119194	3.36826251874421
Merged-chr11-23953769-2	3.13254199725212	0	1.40687314029336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100377861-2	5.48977542960135	0.547396223621598	1.36810731561515	0.400112050694991	0.689073988778671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.465515277017237
Merged-chr17-57331580-1	3.26961846940766	0	1.40313782020298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145338378-1	6.66945263292633	-0.349543667106078	0.814923701487189	-0.428928090406722	0.667975556962492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32164393647188	3.05801249149598
Merged-chr5-30036126-4	15.7205682689083	0	1.35466621953491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47054804-3	10.6744493113852	0	1.35785564372293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142768958-1	2.62687812328308	0	1.42076645718326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35278037-3	9.54792625854213	0	1.36957703669335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82276041-1	3.2563671264599	-0.852359742233029	1.28242584083537	-0.664646418601332	0.506276672232782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	0.67591700901439
Merged-chr16-30511808-1	7.56989566439955	-1.31152327673947	0.624008543635511	-2.10177134610762	0.0355733103171427	0.473025825716624	C57BL6J_F1_Control-BALBCJ_F1_Control	4.611439243215	3.34355216760483
Merged-chr10-95369448-1	2.05228967849386	0	1.6628343819379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79983459-3	5.89554472205486	0	1.35600201212123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76625653-2	2.9099627106079	0	1.46970189879074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21941395-1	2.40837711476551	0	1.45763133066525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123155586-1	3.59048740322808	0.979290323105677	1.41893092374541	0.690160674291838	0.490093150782231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.577068348605183
Merged-chr18-70633730-1	2.65844524862438	1.28623068190579	1.44177430099232	0.892116526852033	0.372330477387781	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr13-109823876-1	1.83775073747704	0	1.59438839219628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102565767-1	2.38592023337806	0	1.49058867282961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62163096-2	3.63271780962424	0	1.43925992150983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117114080-2	5.18271077115735	0	1.41029886607809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38846865-1	2.31400844603589	0	1.58236381155143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21781681-3	6.69036317088366	0	1.37177591943263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53796100-2	4.30516144642434	0	1.43546090791565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27615601-5	15.4526047434632	0	1.3400414301378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71396500-1	2.95883994271656	-1.91562000862745	1.38127165390257	-1.38685247265819	0.165486752821701	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr2-3719602-1	2.49148856054585	0	1.44716173226337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132403210-2	4.71364697938536	0	1.46392343483491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46597515-1	2.38066381321315	0	1.65771876437023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23188015-4	12.6550059665933	-0.312218185784929	0.873837274560853	-0.357295568493384	0.720870547174954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	1.30139522650344
Merged-chr6-90728851-4	6.12210668599126	0	1.35254802264571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84571322-8	29.1162757942937	-0.157857651172598	0.360795505841036	-0.437526656005934	0.66172944886727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5641792639664	4.39955414893699
Merged-chr13-109232067-3	6.63340927055268	0	1.36118491003905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-166952955-4	7.71498860708924	0	1.36661000531373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21566299-4	14.1692911675484	0.93045841661639	0.513936513478478	1.81045400008411	0.0702254116706719	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81660350371508	4.7013488971357
Merged-chr4-150110541-9	32.4923001479931	0.58837038406393	0.322191682054272	1.82615013619384	0.0678276499399499	0.71887353599947	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20602210592932	5.79617840578128
Merged-chr18-64618989-7	32.1723100895959	-0.503056654085445	0.370285142526323	-1.35856559259513	0.174284284398115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54850870113618	3.81751023434162
Merged-chr7-64356835-7	41.0461348678781	0.064677723995779	0.434404121623789	0.148888375538463	0.881641713949793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77711372993726	4.7649444242009
Merged-chr11-22370573-3	14.6212812825904	2.84816288856484	0.616661151072806	4.61868383245788	3.86181757006596e-06	0.000406043600176432	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	4.74731003323915
Merged-chr13-33076325-3	11.0080067612715	0.44806935082597	0.739601610316251	0.605825277522553	0.544630782481187	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69164407730823	2.89948922819089
Merged-chr15-25322257-3	7.35401000198475	0	1.36052277668378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52501152-2	4.46468752674192	0	1.37928466840213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92428276-2	3.65932616633074	0	1.37525691959401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75371162-2	4.14601554915029	0	1.36744198249318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83815801-4	5.59720521890514	0	1.38354419083722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62337337-4	14.7040750952104	0	1.3596474862155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88993830-8	35.2032402584235	-0.0784041676614306	0.319427237126052	-0.245452355180629	0.806106194953941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86890699548772	4.87996622402225
Merged-chr1-138912445-3	5.22121816331909	0	1.40622991140276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122375639-10	77.580688059421	0.22142619875285	0.261097760548104	0.848058590345723	0.396405341723111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6049373021801	5.81614939686025
Merged-chr2-9926982-6	12.8930601685055	0	1.3450291099138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72324886-6	25.3949935276563	-0.349388809104515	0.453035423304387	-0.771217417296232	0.440578072068506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73893928292722	5.32002999057464
Merged-chr10-80688045-3	6.57910188159974	0	1.38265066059526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128608307-1	5.08344297460655	-1.95649209455688	1.21187446273103	-1.6144346256359	0.106433186265503	0.948948658223629	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86170925882537	0.601513806634888
Merged-chr2-120652949-11	57.315002976579	-0.0244435394147981	0.26785171503713	-0.0912577297158979	0.927287804586302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92162678873783	5.89336506735077
Merged-chr7-84272520-4	19.6740501047378	0	1.33988326237636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38201100-7	23.3248771107656	0.211012195124375	0.397212425999406	0.53123261336414	0.59525759556627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0355622268493	4.05722479788502
Merged-chr15-80225388-8	26.0229376839721	-0.612436896902172	0.298064703063691	-2.05471124426063	0.0399069032417038	0.506845643298078	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5396889505245	4.98463515885496
Merged-chr17-84293353-4	7.68137021909939	0	1.37267891315682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63374391-2	5.0691629287972	0	1.4106646188496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41525159-4	12.0999134941538	-1.29450439175918	1.32440908769427	-0.977420348279885	0.328361093222193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chrX-23710211-4	8.76724141510284	0	1.357218124802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-106016837-1	3.67648573866125	0	1.4357145864622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41334656-4	11.1528929916266	0	1.36026699790634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63985301-4	7.06537255951455	0	1.35605847754639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23136743-4	8.35375794770733	0	1.35659498090614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4316271-4	6.96971966578131	0	1.35181267058579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84610926-3	9.14194737746882	-0.034276094800083	1.28301951072168	-0.0267151781509567	0.978686907039453	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0.71701424649985
Merged-chr17-23538922-6	31.2690324383966	0.606933209179237	0.455956515677451	1.33112081593454	0.183149260689428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17847094812132	3.94213836308024
Merged-chr7-67484966-4	7.19746052491656	0	1.37983637801619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115485507-5	28.3618809289494	2.70364403261587	0.407475345466869	6.63511071944279	3.24259044351318e-11	1.37706229624166e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58756406921139	6.22325520191966
Merged-chr19-32470153-4	11.3338540925712	0	1.34492977076791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124582752-8	26.5677161472617	1.22623785727703	0.335281051699743	3.65734314856293	0.000254843109984311	0.0127208600694556	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7597816822868	5.91445653741857
Merged-chr15-77846452-2	4.1805234162921	0	1.43509302783787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113690606-4	10.0728069061639	0	1.36131002273848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75549191-4	19.0662187889672	1.20349704646327	0.496323481822111	2.4248239113027	0.015315813572629	0.271101370887183	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96245250616566	4.23325861678194
Merged-chr14-25473748-1	4.32648919780202	0	1.36539032405314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134632335-4	12.9648135064457	0	1.35854604125607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191850372-7	38.3010756363768	-0.321765785188815	0.43827339290801	-0.73416682462481	0.462847070091011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64227316483281	4.43070050491939
Merged-chr4-114961015-1	3.62393971450533	0	1.41610022028998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143079309-2	5.00352464705565	0	1.40301499409003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76581400-2	5.11018331255054	0	1.38480826895854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46039517-5	18.0915376424603	0.607944045390218	0.613070055247815	0.991638786116335	0.32137376177664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00024646985406	2.56857732031486
Merged-chr17-31088935-6	16.0317792025023	0.0987542261036986	0.518764163475407	0.190364394953778	0.849023596183816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75418520035836	2.78212461141695
Merged-chr6-35236574-4	9.58509127885357	0	1.35243730560294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101327433-4	7.3482291701117	0	1.35183435278633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57390530-8	26.2347771773285	0	1.33796004678487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81097627-5	11.3201667181429	-1.84901380876707	0.9305720631892	-1.98696466604665	0.0469263125830252	0.565477150454592	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24553328998514	0.724326877898254
Merged-chr19-37604140-2	7.20326409475021	-1.70978513379913	0.672969097342849	-2.54065920790427	0.0110643706712838	0.215033294715879	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50104664305335	1.51226750748471
Merged-chr2-180126291-4	17.8294545169387	-1.81963667071639	0.589261097306265	-3.08799728852733	0.00201510309530122	0.0627011958543097	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83575809138766	2.08695703474815
Merged-chr6-120454268-4	8.36060400295042	2.98581649404479	1.14292682148786	2.61243015555263	0.00899010597145951	0.186940476826419	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.882176137820124
Merged-chr10-56944616-4	8.10126636343863	0	1.35150982692549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135193029-4	8.82520267150353	0	1.36541721575366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121258993-3	5.0745215709379	0	1.37135899150595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52182228-3	6.19842737991078	0	1.37335763794215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75833635-4	10.7269435762093	0	1.36130987373246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148990043-4	8.44560848634732	0	1.35093475767212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131747866-2	7.72638773499481	1.15177787366966	1.28880107282067	0.893681653405888	0.371492244308921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.724326877898254
Merged-chr8-79587489-1	3.77721989322349	0	1.40294878505668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95507020-2	3.47553363092204	0	1.45442495361209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80693018-4	9.44518112867531	0	1.36184405517354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55486502-2	6.03275683776675	0	1.39140626601682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185238682-8	24.8062122572537	-0.514999939626935	0.430623331060494	-1.19594063414689	0.231719726684303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36200971412269	4.64660465895876
Merged-chr8-83055033-10	40.9571831350159	0.761693412978771	0.360199183732182	2.11464502802736	0.0344602128729607	0.463783785977042	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59540501390111	5.32206828663589
Merged-chrX-164836659-6	25.7219554633102	-6.24094602076444	0.976597597517783	-6.39049905163297	1.65345230320517e-10	5.65283105345471e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65759024444221	0.376242425970964
Merged-chr17-71251336-3	11.7474321039651	0	1.3632835280146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31018367-2	4.70969889500297	0	1.3630757748207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116666853-4	10.7681793196239	0	1.37358146631765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81107004-8	21.5549604499408	-0.197348007889363	0.455492478698187	-0.433262934337336	0.66482376254518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36264169692174	4.156920070805
Merged-chr13-95849959-6	25.5311741026561	1.96206587903252	0.464757622366745	4.22169704079481	2.42469864698791e-05	0.00183229680935592	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88513399620689	4.84054617530466
Merged-chr16-35765558-7	44.4199158141171	-0.748254840619247	0.276678269739205	-2.70442214823935	0.00684233010423002	0.153695133113983	C57BL6J_F1_Control-BALBCJ_F1_Control	6.74475357314275	5.87664787911935
Merged-chr13-64308170-8	69.0329498029696	-1.48346211907338	0.300220207829862	-4.94124672618332	7.76246045847588e-07	0.000104445442589676	C57BL6J_F1_Control-BALBCJ_F1_Control	6.5601241065601	4.87405064447632
Merged-chr11-89031349-7	31.7874087135328	1.22249251025878	0.451907178154268	2.70518497903004	0.00682663633326465	0.153406004315805	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85715637332171	4.15217608297422
Merged-chr2-59055927-4	10.9644254585137	0	1.36080040178325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99221045-4	8.23432010753793	0	1.3735153698653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16828664-8	21.4465793936655	-0.0248337696574342	0.393714203213803	-0.0630756255545815	0.949706283630675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41842351129448	4.01138481450883
Merged-chr1-136117210-2	6.67599989855373	0	1.3638855104277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126588818-2	5.68681432031913	0	1.37157312746221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24492715-2	6.1331646513922	1.88198067520195	1.10362714700716	1.70526855949996	0.0881443485301963	0.840871026385365	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	1.56379394835609
Merged-chr12-102506237-2	4.79436135167192	-3.98556011677759	1.1540701488599	-3.453481680221	0.00055339989007401	0.0231580174168846	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37109694546247	0.303163067301871
Merged-chr5-77387011-2	5.51011146684928	0	1.38356622611024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97273511-3	20.6202457139187	0.705245582182177	0.491831237436103	1.43391783299205	0.151595712215293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01147994900628	4.23390375965221
Merged-chr6-47631751-3	5.95044261274447	-2.57408826819231	1.1723090439714	-2.19574205405098	0.0281104112817591	0.406136503387282	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0
Merged-chr4-53303667-3	5.05084725544379	0	1.38216194079798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-138885742-1	3.72905842254168	0	1.43828748810761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121603769-3	5.0052439026702	0	1.40296267279269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3854673-3	11.4183766883967	0	1.38226042620293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58453166-3	10.7953245475473	0	1.39677132776191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141057198-3	9.28293298191497	0	1.3733256460015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71300551-5	15.2483602299967	-0.913008500430252	0.613678554568468	-1.48776341234911	0.136813297759919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32762525854924	2.75782587889269
Merged-chr2-157108411-4	5.81554847448033	0	1.36836532975003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113805517-4	6.13863418156331	0	1.35879275047262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152686083-4	10.7460722554531	0	1.36604179142783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50849449-2	6.22527911115038	0	1.37967615367962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101185465-4	7.01383173583292	0	1.39325585048217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108448444-10	55.7040647497619	-0.420837194596533	0.353927602663687	-1.18904880950025	0.234420460520111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82313534824007	4.18266399161975
Merged-chr4-83433069-6	18.7585172795714	-1.42291383487721	0.651551131767041	-2.18388667519953	0.028970576386056	0.41507948386126	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84191043294429	1.86501351763573
Merged-chr7-3442916-4	8.2872266105128	0	1.36509647497261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97312117-4	8.09249736052755	0	1.37132914443503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124373737-4	7.90458976507912	0	1.35519952279338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70621283-4	21.0181225782757	-1.67896140305917	0.607669957944076	-2.76294949439262	0.00572816292643694	0.136150943820807	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17773122292042	1.56203317187393
Merged-chr15-59106121-2	3.06068613508117	-0.690682986962738	1.4170773555809	-0.487399635766256	0.625975151621002	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr11-3168654-2	7.23529530179963	0	1.41202754981217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55782058-2	3.36868483904324	0	1.4064882322919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76376895-4	12.2970634438545	0	1.34768701266679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48528685-4	7.84908279334912	0	1.36122706841859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28957984-4	7.95162176080261	0	1.37105627878814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-146967683-4	8.15611914423576	0	1.36645281224084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116145452-9	47.4668400785908	0.416887049947373	0.266053898506848	1.5669270485681	0.117131744428277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35111083821512	5.84605453548524
Merged-chr11-83535983-3	6.876126974521	0	1.39997202131066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131094763-5	18.911564873815	0.558788992312952	0.829146211853343	0.67393299797381	0.500353912054791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60454151879405	1.76197067039868
Merged-chr5-66138799-8	32.8198523864024	0.188474666173843	0.330839744791968	0.569685683599944	0.568890901853993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6702743802147	4.81284535528623
Merged-chr18-46613363-4	8.23747526433817	0	1.35975273219032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52578878-5	16.9440954754317	0	1.34177187412044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128654494-9	62.1863367545711	-0.104587451333724	0.314828724664353	-0.332204284870217	0.739735008465488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6139149306886	4.58223263304522
Merged-chr15-67300711-7	17.5591670860349	0.225163579689586	0.447328918934406	0.50335127052808	0.6147173254779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12789417520241	4.21770148252778
Merged-chr15-103552701-4	8.48912577919589	0	1.35563608255745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-24617514-4	8.73325699830681	0	1.35849875011401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83729559-8	34.287802800655	0.306934981230072	0.375196837243084	0.818063882108936	0.413320711080112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65137228759234	4.25035621506569
Merged-chr6-39372893-4	8.77876907181855	0	1.35199692111364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174674165-3	7.03353774371263	0	1.34766623268719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31612840-1	8.03755440001914	3.6630306273367	0.918039914946177	3.99005595257964	6.60577102910795e-05	0.00414319644011983	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17564474993106	5.24120964715493
Merged-chr3-61474312-2	4.00092973791585	0	1.38054877167436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83312660-4	9.50221536368609	0	1.36617534906091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112718249-4	14.7470250606902	0	1.3758620855977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151322111-3	6.9487853663509	0	1.37791263176887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65922667-6	45.2305219222291	0.434977916352976	0.41290010373216	1.05347010674315	0.292125587851103	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50110366846585	3.83761226316026
Merged-chr9-103345757-2	3.77009368836397	0	1.39477499324805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116845064-5	18.5173323356057	-0.193310756701656	0.581251128268866	-0.332577000370548	0.739453607023929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1299791692323	1.79394971953285
Merged-chr1-167517907-4	12.9459957298346	0	1.35078374891873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59390366-4	9.8778542862303	0	1.37331820655386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90475014-4	6.66490781746287	0	1.39656661604062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153492693-3	8.56253126763963	0	1.35279799311941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82751397-4	7.37951917652851	0	1.36633352609144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32071133-4	15.3869735581023	4.03070555841844	1.10041455733707	3.66289734313626	0.000249378497695692	0.0124939776555209	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.01723318870687
Merged-chr17-40890339-3	14.5030538296569	-0.748202191255389	0.792361467926197	-0.94426877320728	0.345032318974166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24287124256397	1.44790810950236
Merged-chr14-26994545-7	27.0352915566454	-1.35100879060417	0.408470375725766	-3.30748291893558	0.000941384526663074	0.0342248906673474	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91978899838664	3.66312593494601
Merged-chr9-24770545-1	2.03245521356008	0	1.45230147466368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106620359-2	3.64696285137588	0	1.46072253270121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45269099-1	2.12241579990538	0	1.49499160193015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144981866-3	10.7607799731414	0.519687022038673	0.575800034073046	0.90254774450525	0.366765970947568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19033506375913	3.89178343257794
Merged-chr15-101141286-3	7.4504720518098	0	1.35680700443951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181237533-1	2.13150918960588	0	1.46726359813596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104661628-1	2.88308939280376	0.858723972004596	1.118573066487	0.767695913420759	0.442667864596945	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.71198986169893
Merged-chr1-24702521-1	6.47173727730228	-0.471953184031798	0.646825568364222	-0.729645219847037	0.465607073760602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1506388819879	2.76159079903418
Merged-chr15-35515695-4	12.1823367786576	0	1.36041408495366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57099837-1	1.9558659054798	0	1.55286641076926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165332807-4	13.8113944739058	0	1.3510631709499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4494343-1	2.06918811871698	0	1.44573224745077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101658503-2	2.92939074837396	0	1.51946541825122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20826184-4	14.5481949463519	-1.3205817689469	0.610702687622283	-2.16239717904054	0.0305875748319727	0.428550944738237	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88277055085235	2.1470834997664
Merged-chr11-55452273-1	2.48003991979025	0	1.46678991462135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91475922-1	3.99291427011822	-0.0377056326732482	1.17500524892401	-0.0320897567970668	0.974400472096691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr15-74918626-4	11.5150583712583	0	1.34304042786843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53541050-2	2.54947610760827	0	2.02248947182974	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36222524-2	2.67417065916575	0	1.47303286220324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-81743941-3	11.7529372727945	0	1.35293814436479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132235384-1	3.82199436143012	0	1.39824538957324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115268467-1	2.04234488213704	0	1.44745297002246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-74297105-2	4.52898632826207	0	1.40177189611088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38765539-1	1.68785889947259	0	1.53370834287555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75500384-1	1.61242811550201	0	1.85577593006515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117385499-3	7.69915669935736	2.42896142814311	0.887163104210201	2.73789725543816	0.0061833390465596	0.143273711522563	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.59902514959701
Merged-chr8-125278447-3	8.02308905250232	-1.13713359382027	0.794334904422947	-1.43155435759978	0.152271399904865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3697525094638	1.30064958020929
Merged-chr4-149638179-4	12.3764462232769	0	1.34756276009157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60905450-4	5.77879264939316	0	1.3757467115317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79037813-2	4.29160169963511	0	1.39720166239161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52698177-4	9.39341592066742	0	1.35055888341068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32183247-3	6.88591632193934	0	1.37296597878926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143906615-2	10.1296006195195	1.68009856965683	0.645207910956722	2.60396461532153	0.00921522702778183	0.189818312240694	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21976063750012	4.91676031070551
Merged-chr1-139065398-4	9.40363995905642	0	1.364246357552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54839238-4	13.2169943454435	0.282869956929564	0.576321679895321	0.490819566220279	0.623554069999129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25999104303911	3.31641141862538
Merged-chr10-51414720-4	9.00277664046432	0	1.35565013163753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30502652-4	12.0724323185213	0	1.36003357469754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20114587-5	13.8878017064322	0.201835570274024	0.718111288851107	0.28106447204992	0.778660950384249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87393143868528	1.92822012848219
Merged-chr11-97436076-9	39.1474503810158	-0.0547549156682082	0.345223164742336	-0.158607304666463	0.873978273361425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91166276033679	4.9780616146509
Merged-chr9-65741163-2	3.89617277940043	-1.50106752136339	1.03097630472888	-1.45596704257732	0.145401730597922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	0.723581231604105
Merged-chrX-96107629-4	6.29693285184885	0	1.36753349098123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3744246-2	4.98355023876616	0	1.37979107409576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121224032-4	12.5186362670361	0	1.36853696691928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176847677-6	16.9778173726778	3.03907385393223	1.07300158796593	2.83231067690529	0.00462129236287503	0.116624341482602	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.77929101765279
Merged-chr4-99225005-6	18.1435991547198	0.228693832968258	0.427282167017745	0.535229060843908	0.592491473274636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87041704106699	4.03656930526372
Merged-chr17-80734875-4	6.07394231719176	0	1.35941292695246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54222523-4	17.5808934978693	1.97888595864119	0.695503219005847	2.84525779976952	0.00443754921594716	0.112825415261773	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	3.68502730872579
Merged-chr15-5872250-4	7.03911344600921	0	1.35791928149627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103246539-4	11.4657670424618	0	1.35406586949035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164440414-3	5.74693230509119	0	1.42187127803692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-75108262-2	3.17299963635007	0	1.52840951293299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77271063-4	7.31521285602495	0	1.35646518530907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-93506106-2	4.28362974597988	0	1.39409817425277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93668968-5	21.6629252747099	0.692754133414335	0.755116389080183	0.917413717186285	0.358925887426747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	2.1600769923993
Merged-chr7-125638965-7	29.6351742788902	-0.357667502562685	0.361863980792096	-0.98840316126456	0.32295523991037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64122728954271	4.28061012607488
Merged-chr1-184020809-3	11.7224544025971	-0.993469852510289	0.594867376243063	-1.67006948470537	0.0949056167891318	0.880821994714088	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31284971441573	2.8215054542125
Merged-chr10-59268272-4	9.05470651365573	0	1.35150268698134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112323963-2	12.8091994022299	-0.523924289443937	0.561645867643688	-0.93283743302874	0.350903910682756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2141966593083	2.91718979592903
Merged-chr6-81958226-4	16.2890919326888	-1.26168447174448	0.623919787852235	-2.02219018583731	0.0431567077797135	0.53321865873074	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31728133887733	2.2979606408898
Merged-chr14-78701294-4	11.2187908910005	-1.47495789389606	1.18937832388662	-1.24010826855851	0.214935351051615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.41385117919798
Merged-chr9-104271872-4	7.7890607198001	0	1.36545284414567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38861102-3	5.09822539940293	0	1.37555115919385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180945591-1	4.21044361509963	0	1.39679824026846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96476887-3	7.52067962178479	-0.0354916900631506	1.37022397327227	-0.0259021085278431	0.979335418250094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr6-72155846-1	2.64700567393465	0	1.49192119060304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15068330-3	5.253446783695	0	1.36467630458547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5805750-4	8.12359042601565	0	1.36796344325385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127717181-3	6.53791587041867	0	1.36598488233992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88285161-3	3.97517676784487	0	1.41436383497248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58401361-1	7.43811065008177	2.55091275149243	0.937794658468706	2.72011866185902	0.00652584935088618	0.1483021090572	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.09008210478717
Merged-chr6-145341363-7	38.0774360243288	0.664438844026524	0.436838365966432	1.52101760237236	0.12825542010888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1362678864151	4.93239022977983
Merged-chr1-155817766-1	2.17953044981541	-1.48396474649694	1.62605756526307	-0.912615136264783	0.361444990773687	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	0.465515277017237
Merged-chr6-129344613-2	4.72430853667891	0	1.35911682752674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-109220552-7	14.917673196794	0	1.37683132529466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21711072-3	5.2290500082782	0	1.40695779331573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97737381-3	6.24791491434123	0	1.36190083144586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45088002-3	7.02627304898102	0	1.37130715590891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161713131-2	5.80476904093627	0	1.38076057480949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78916595-4	8.15297853063629	0	1.35365807442276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117989382-4	12.9153960900435	0	1.35849190698632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116972378-8	31.1212050044943	1.09317627312166	0.368068282210748	2.97003660993459	0.00297764261065338	0.0844745633788178	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80581250207881	4.93910755188658
Merged-chr7-35026078-3	7.99516302274428	0	1.35553623992106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60508186-4	6.39216001388833	0	1.37128220001616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35765141-5	21.3001377327854	-1.44766996257845	0.39704884446197	-3.64607524431949	0.000266276036740696	0.013218720622089	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87694882902761	3.51700327820077
Merged-chr6-113691237-3	8.71635212602348	0	1.37407093345982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91916763-4	12.8129339378759	0	1.35236152046681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16250890-4	10.6176736306585	0	1.35131240637794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47023703-4	5.99858572212897	0	1.36806637873229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98357430-2	8.20247878091777	0	1.37032187679265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-65501025-1	4.1085947657936	-1.9661312950543	1.2922228046477	-1.52151106448731	0.128131636845239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	0.41385117919798
Merged-chr15-25376568-2	3.93497243195206	0	1.40498835396832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5368833-8	26.3464483196968	0.651443928304159	0.460380740899055	1.41501125140896	0.157065197158938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15190559219896	4.19789167961577
Merged-chr11-8708836-4	7.91238036641059	0	1.3560312497818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-40790060-5	18.8192655086519	1.07216491038829	0.564938453657758	1.89784374465295	0.057716668752914	0.65064711670254	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91720392291469	3.9942969701768
Merged-chr17-29245868-4	12.0152193565886	0	1.35276385594952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8807332-1	4.21095219892436	0	1.38594801811553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39226100-5	11.4985567278709	0	1.35965156401358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118487187-5	20.3484625282639	-0.417739530124109	0.46664608589483	-0.895195615587476	0.370682528083444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16650737783767	3.72880147646071
Merged-chr16-85139503-6	21.8522588694226	0.861516150853028	0.391306210908485	2.20164190303259	0.0276906135378008	0.401931658558429	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23111091847521	5.01063295972752
Merged-chr11-46373268-3	5.87808748216636	0	1.37432424111761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116088058-4	8.03019188242928	0	1.36451043184852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106973218-6	24.3553466142818	1.49602909203006	0.429134721236756	3.48615252505913	0.000490021525326716	0.0211573312908936	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45006719736648	4.88300480630992
Merged-chr10-121297573-7	31.7859386451838	-0.140169609011854	0.275622264794518	-0.508556916170592	0.611062834660991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.81254259115164	5.62992421924583
Merged-chr19-17255729-8	48.1555602059153	-1.02676203575413	0.409119403059225	-2.50968794947497	0.0120837891416787	0.229431608086802	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92779789231298	4.21714628687395
Merged-chr2-154773217-4	12.2542702243673	-0.534865364153781	0.711903895595083	-0.751316810405546	0.452462014672443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61313103836483	1.81828307388421
Merged-chr19-32077676-7	22.9034105802384	-0.493134682215966	0.569576790319386	-0.865791392130715	0.386604570500948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79306698568243	3.26927728794227
Merged-chr6-134366681-18	99.8501013723226	-0.0927771382956995	0.246724490605203	-0.376035382900666	0.706890591449533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20810315875182	6.12219737876401
Merged-chr8-111477952-2	4.26087665158704	0	1.38653223388601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35841729-2	4.68754211562243	0	1.38016272840876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46987854-4	20.9818598799564	5.93848744532598	1.02495168689469	5.79391938298859	6.87624753041879e-09	1.66127084224904e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	5.2767507528635
Merged-chr7-89270660-3	7.63080919054511	0	1.36315446483503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67695021-3	10.2736162303437	0	1.34955511959256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61448299-11	44.9703099061705	-0.0676361393962599	0.310466861854112	-0.21785300689528	0.827543642748286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72062750083825	4.63866737982255
Merged-chr3-96227527-5	9.38991742054336	0	1.34980360190658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148495495-8	88.3020686862802	0.571936274833952	0.342311579864988	1.6708060973559	0.0947599838036037	0.879921072699026	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55852510486885	5.0802391356527
Merged-chr6-136930932-8	27.7841469496741	0.178131174092725	0.390164489548543	0.456554040319865	0.647991619959369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86295419362112	5.03771043501526
Merged-chr13-62971067-4	9.1737058511371	0	1.35165005510252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16593073-2	7.68491622615063	0	1.36546243314826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117202383-4	10.3273039706879	0	1.34925222512747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37860526-4	7.54995419386228	0	1.35741432800378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113656141-8	31.7446534864402	0.0395136172322887	0.430145193795981	0.0918611152750206	0.926808386301486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3457163028161	3.75452185620022
Merged-chr1-107447776-4	10.7130347770023	-0.035978744742155	1.35758184827739	-0.0265020814677271	0.978856873412261	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.41385117919798
Merged-chr7-75681287-4	6.98454749650605	0	1.39680515650607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101367089-2	4.19354030059268	0	1.43063752097015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68732143-2	3.88658759270193	-0.342015142225961	1.40942462339098	-0.242662953768394	0.808266508342229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.600815099743027
Merged-chr3-27226957-4	6.69396035220116	0	1.3730304750513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31560148-2	4.97997125234443	0	1.39198481920564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47165296-4	19.6688503863757	-2.06943536205476	0.895420821531821	-2.31113160682876	0.0208255866481191	0.329622943452264	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98003679573008	0.879366456215217
Merged-chr2-45840601-3	5.84337617689634	0	1.36249061054545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83637898-8	27.0749562846283	0.234487769392418	0.456173321032032	0.514032185972473	0.607229488016444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19897149920794	4.4601701665795
Merged-chr1-191281414-12	89.1318021026836	0.25043126655219	0.205522484254853	1.21851031268019	0.223030108242238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.4201660871166	6.67696208598106
Merged-chr15-5708676-4	8.21382337875528	0	1.35381179831778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34198214-4	7.92009454027211	0	1.36148538277869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118495065-5	19.6838297787364	-1.38658186218904	0.535792671308939	-2.58790748070822	0.00965609121818483	0.196369421073441	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98802484375781	1.88416337923901
Merged-chr8-95427791-4	7.08561071589941	0	1.35218744097048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23821126-4	6.77382184687672	0	1.35502411250116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-103970200-1	4.93052074329273	0	1.40130641818887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112282880-2	5.44309320003734	0	1.44736727109226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116807304-2	2.60595211619147	0.611717548904241	1.49399994710544	0.40944951175495	0.682209811085915	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr7-55784771-4	10.2280196032636	0	1.35979289979352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47883260-2	8.95969484469705	-3.02598458641065	1.06751047723015	-2.83461816155858	0.00458804873138273	0.115946880980583	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20013369860462	0.465515277017237
Merged-chr13-35941232-12	50.1383445510884	-0.1447686553649	0.359355020078049	-0.402856916632076	0.68705348732795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01377420845938	5.79442830963141
Merged-chr9-119948986-4	9.67122828212939	0	1.35523958558086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-78865073-2	5.08609785840906	0	1.42812573923206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31572517-4	7.44510449040134	0	1.35685807337961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125334549-8	35.4498570102962	0.026662895452013	0.348842496273945	0.0764324752196325	0.939075033674901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46982908479385	4.51076905933261
Merged-chr7-55869422-2	4.73556671289776	0	1.37706097144893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62724615-4	13.6284922809165	0	1.35376035472249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138210818-4	4.9803714123136	0	1.39096754493526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130819016-4	8.67177207467401	0	1.37247218787076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92484682-5	12.1868005453923	0	1.34098964186274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99235164-4	7.8542446395382	0	1.35555238911721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139614676-8	24.3388303110105	0.351079660951532	0.365574054013265	0.960351690984046	0.336878242722079	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39964869906036	4.76151358785433
Merged-chr16-31570971-4	10.0619935409424	0	1.35343581587333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78248612-5	16.8240023197743	-0.401532666876486	0.578902606226811	-0.693610052118452	0.48792678808311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06458233164114	2.7804345304524
Merged-chr15-77805949-6	15.6965629862676	0	1.3488392534195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17276882-8	26.5864081181955	2.31237297173787	0.442672525801539	5.22366498248543	1.75416028290349e-07	2.79631668089006e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87695329383886	5.68591250200443
Merged-chr11-103320438-8	25.1794363676939	0.386582062540088	0.439500863082975	0.879593409278706	0.37907961051216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29083880046866	4.64161885190901
Merged-chr18-32855294-1	1.47542347412411	0	1.71623995224179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11719372-1	1.54263588813168	0	1.55303131323486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40020726-1	1.4158623962319	0	1.65299719129454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26133412-1	2.95232720766923	0	1.37987107508741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31166179-2	6.05426059760485	-1.91451269527863	1.37003084614856	-1.39742305851049	0.162286389121324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr16-57915379-1	2.5789062849316	0	1.47244707267244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35759922-3	4.34582521788724	0	1.4257943735502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10460405-2	3.11492716715805	0	1.59311333027071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182378600-3	7.35337907216758	0	1.355180780026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87575914-5	15.7371766836109	0.0123553925271429	0.608536821548959	0.0203034427657042	0.98380130942421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03907851755733	3.82452675179803
Merged-chr10-82973709-1	2.66801045231168	-3.44486275989225	1.33655101172036	-2.5774270713829	0.00995388834816507	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	0
Merged-chr13-37784431-3	4.17637449372362	0	1.40927145853185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41776980-2	7.13432572601899	0.781471612065809	0.773464803704589	1.01035187163381	0.312326737526454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.578845274708	1.8534679828657
Merged-chr1-165661458-3	6.07852910056608	0	1.39481684026324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53763079-2	5.44071388765125	0	1.38578521256075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102682429-2	7.98199285377614	0	1.39887804288826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17820655-1	2.04976349369376	0	1.45859733477252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111785694-3	8.83043961064564	0	1.35710861559169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16703049-5	38.8133729882509	2.41133669487466	0.443201375532719	5.44072475401568	5.30642464715861e-08	9.94661853085844e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09995409920766	5.68590365016081
Merged-chr2-150311066-2	7.92270526852219	0	1.36467647730432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25485040-1	1.84848771401565	0	1.50776705556614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25330164-7	30.3361887815021	-0.306986059897287	0.408887483960137	-0.750783704416874	0.452782838020816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22161307852799	4.11301289444863
Merged-chr6-128754012-5	22.6260432925694	0.792812805243768	0.397054699469526	1.99673447084994	0.0458540354123084	0.556876566348899	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92044182304664	4.62581168763364
Merged-chr9-114648711-4	15.1569585517121	0.89190449725206	0.471926410733592	1.88992282899706	0.0587682818517861	0.65718679966699	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21444889015399	5.37245756303869
Merged-chr8-126580965-6	16.7741946913326	0.252319339884306	0.562149450677458	0.448847436531746	0.653541716357764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65647657108095	2.99532585549162
Merged-chr16-49929935-4	12.6800753413871	0	1.3440072686253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87459460-4	13.229741637618	0.240618021430117	0.529804282135321	0.454163980065112	0.649710806300523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.607509710407	3.19759603683487
Merged-chr4-126017855-5	15.6308110904569	0.504724043355145	0.656218743518107	0.769139937468456	0.441810241664218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98485448024296	1.87939799956443
Merged-chr15-75085587-4	14.1176499923787	0	1.39583009563521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40640124-11	66.0104084116158	0.0276426263045713	0.282781940310446	0.0977524458394493	0.922128869178258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59755035187234	5.59242880003017
Merged-chr13-57973750-3	8.77879591344443	0	1.36421970317799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38806987-3	10.3596318866439	0	1.35715038245632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-42011078-6	17.9806703945498	-0.656572180517029	0.414270781415939	-1.58488652825798	0.112992117901416	0.980704979579963	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81254491146842	4.18196043469054
Merged-chr10-20915840-6	16.3720004189046	0.149564033268538	0.415416467739011	0.360033953594982	0.718821742500695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43408329824425	4.81333848564041
Merged-chr10-100839678-4	7.82394358903053	0	1.36090878713109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23538452-2	5.01357186050431	0	1.37667888030899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135890071-3	4.81059008107545	0	1.37180343019672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55459934-4	6.7762691245781	0	1.37208038374921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131432106-4	6.46714462335604	0	1.36561059264179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95907085-4	7.77137148847627	0	1.35911818409294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29496383-4	8.70574937987382	0	1.36103883114228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25413727-4	8.7865381672456	0	1.37506771229865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113703527-3	4.64040466668619	0	1.38384970222089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32390194-4	6.2675880299375	0	1.36484523177811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53696045-4	11.789982734446	1.20453108311781	0.990703257305908	1.21583438253083	0.224048018306209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.45526469271556
Merged-chr3-144352819-2	4.72769294789164	0	1.38304116010848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23659631-2	5.32373223679064	0	1.46800904134898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62047084-6	62.7337853429212	-1.35542207977121	0.466573175398345	-2.90505787996491	0.00367185192237954	0.0988599299894153	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31369260982167	1.93293841296415
Merged-chr2-128437270-4	14.5206625217937	-1.85055258763043	0.526319388999126	-3.51602587005112	0.000438058297978946	0.0195664839932929	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07371064906692	2.63199695194963
Merged-chr17-67585403-4	10.0305215762173	-0.455879164459998	0.676381014934192	-0.67399757591415	0.50031285482611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97263263868485	2.07771909425719
Merged-chr1-183600704-3	17.3096188564245	-0.632920042813216	1.32989172195816	-0.475918476942839	0.634132458168396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.376242425970964
Merged-chr6-134705930-8	20.3556956059001	-0.0564572350650062	0.377166346625778	-0.14968789121852	0.881010861946231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89631648814533	4.91367509311922
Merged-chr2-150861262-3	13.8759515389094	0	1.35463878425475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44760388-2	4.4986745484605	0	1.37054011723719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75587788-3	7.59439150796276	-2.42656572919647	1.161136180687	-2.08982009996516	0.0366339630798974	0.480640538736569	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82306449654395	0.303163067301871
Merged-chr5-135478981-3	14.2942517146095	0	1.35574692460145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26638040-1	2.12871513045976	0	1.65322279182568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109467443-6	18.919843711511	-0.039067005799277	0.527984457281855	-0.0739927194076886	0.941016178452468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79345952914062	4.7684821742221
Merged-chr14-101516259-2	4.62538680821517	0	1.39796574693974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34134552-4	10.3925102845847	-0.0706060815963157	0.848212991044856	-0.0832409811471301	0.933659927548924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60588664266147	1.39408867961451
Merged-chr6-122633534-10	42.8014685848416	-0.133273129813777	0.297346478372399	-0.448208199886143	0.654002945398936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00416657509302	4.8577122039118
Merged-chr1-88265102-1	4.22645206550074	0	1.42991603231747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74505419-6	20.0724961491601	0	1.33598375128004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45031459-4	8.27621409172783	-0.0354425587694103	1.11978322327926	-0.0316512678816688	0.974750157991317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr1-95647068-4	8.6007357539455	0	1.35957635770393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116897031-3	4.9638279363674	0	1.41349794806777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33902131-4	7.95921868491593	0	1.38640489984427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3137443-4	13.5846253108715	0	1.35594660614816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99421377-8	25.0148851726324	-0.272073261881119	0.346460341931768	-0.785294098493678	0.432281155135872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01940021276114	4.65697800180832
Merged-chr5-90661629-3	7.31706018564883	0.194772122898029	0.93094011004711	0.209220894873863	0.834275801615325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.14046671619316
Merged-chrX-49280128-3	8.18832156006028	0	1.3464964683197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70804145-8	23.8008656445606	-0.268888307604743	0.387041397674283	-0.694727512923638	0.487226082556022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81555415263143	4.51124489184797
Merged-chr4-133690403-7	22.5152924811713	2.04382712435041	0.515765887293344	3.96270318511385	7.41058910581635e-05	0.00456725865309604	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16680051662379	4.55942908707489
Merged-chr9-85587312-7	40.0064247134324	0.637277886342324	0.313206376894631	2.03469001065938	0.0418820739594725	0.523733070706916	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68814136374568	5.28810411298402
Merged-chr2-117194383-2	4.00902713916935	0	1.39525452006023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96188309-4	7.80874281410788	0	1.36429753284804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15269780-2	5.21980335800084	0	1.38833544022031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102878224-2	4.1973472167246	0	1.393119816348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51429253-2	2.6273616296494	0	1.55128225913083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91234931-1	2.9577860907641	0	1.42432060438543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87363108-2	3.51727382978151	0	1.43853933536019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191192601-2	3.00029227880628	0	1.47429888387227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136129545-8	25.114807594874	-0.50838938739135	0.363083942023506	-1.40019793923698	0.161454052799405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81810848456818	4.20689441369708
Merged-chr7-144991969-8	53.8767178908642	0.331949886628575	0.373468250660062	0.888830271494009	0.374094304324551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82980114234141	5.00798716951643
Merged-chr12-86892520-5	18.1872912864462	0	1.34279963018654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-130231614-4	15.0933100855542	0	1.34918879657485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101310490-3	18.7694133085285	-1.01172970084512	0.596577248885041	-1.69589052002229	0.0899066153130079	0.850841521901078	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54474317690932	2.94531529903527
Merged-chr11-64496859-8	36.5527707332506	1.43337752730282	0.333657120574992	4.29595965113133	1.7393922072231e-05	0.00139869261823137	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11491015260068	5.69201626971285
Merged-chr4-141834705-7	32.1179961908986	0.491290727259648	0.318717205013991	1.54146283768422	0.123204180780821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19867966244943	5.84995531594852
Merged-chr7-126099215-5	10.3164414694717	0	1.36516480143773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80025870-7	30.9226044050414	-0.419647717445381	0.55038059018431	-0.762468235489284	0.445780594346538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86782085733762	2.93199185793964
Merged-chr15-31474133-4	12.3636894263468	0	1.36382187024166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41074017-3	10.2709966389578	0	1.35486581965094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37443062-4	8.51972336139602	0.491082397154648	1.19846834875228	0.409758336685248	0.681983231670274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.723581231604105
Merged-chr8-46837189-4	7.49775218472003	0	1.34939319831369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104604854-1	4.25560424115727	-2.3561034871691	1.29460266638895	-1.81994332959394	0.0687676354773251	0.724385518981224	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0.303163067301871
Merged-chr12-79319881-4	9.74145056107797	1.10610392033107	1.24749351227856	0.886661060313461	0.375261408961337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr1-191122959-7	44.1582443461309	-0.517040718470232	0.291466846086631	-1.77392635015701	0.0760753335111465	0.769945830261108	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26905003168551	4.68008252962151
Merged-chr10-10462628-3	8.90623669787952	2.59491407584054	1.04712415992944	2.47813408871725	0.0132071500779001	0.244530023437625	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.39318016050435
Merged-chr2-6284903-4	9.99534549853879	-0.860454911207322	1.17033015742038	-0.735224078224146	0.46220303719631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.465515277017237
Merged-chr13-100408445-7	21.7742784285712	-1.31090932950031	0.472995890082047	-2.77150257959517	0.00557982301940014	0.134036543532512	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76949634649957	2.6654851827831
Merged-chr17-71260493-5	21.5254737775518	-1.57024448570099	0.401974542135848	-3.90632819023231	9.37092174951051e-05	0.00556718612851895	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11563254688524	3.61325768750852
Merged-chr8-120564196-10	153.529417388696	0.29372770780074	0.272059252073057	1.07964609019018	0.280299808811741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0568425759722	5.34931951689446
Merged-chr1-176224046-4	7.52984513529375	0	1.35960556421399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-40402501-2	3.05254377427584	2.15162924426456	1.26877879219595	1.69582693019373	0.0899186608446035	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.06702908365212
Merged-chr3-115815689-4	11.3871963503001	-0.509390691639544	0.729074028281853	-0.698681713899453	0.484750964226312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61172714692339	2.28167437843862
Merged-chr11-50369623-4	8.02898199875212	0	1.35155202457843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9335482-7	36.9526067135957	0.389449647074293	0.333597736035395	1.16742293188996	0.243039614761795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31744465556248	4.75573600286589
Merged-chr9-70833287-4	7.55967433234206	0	1.37080155151938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91696362-4	9.72744595032833	0	1.36051656730749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34808358-6	25.4370180799072	-0.219251711446472	0.622862059439717	-0.352006849869287	0.724833125394177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99851835977585	2.35583410757327
Merged-chr14-59556348-3	7.66985482236246	0	1.36256935941139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-26041498-4	8.26933626340664	0	1.39258269800261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141047969-3	6.66955388588577	0	1.37004263985039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43569834-4	9.19896039595449	0	1.36254005359071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139743811-4	13.6411723376694	2.99969057996381	0.701776382812995	4.27442509242028	1.91631116622085e-05	0.00151837673041868	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	4.43446466385
Merged-chr1-193852876-2	3.77374225021545	0	1.42917614626621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43865648-13	61.153398483989	0.183055246964204	0.232872320146876	0.786075592190384	0.43182320267399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.58632577468689	5.70706085205696
Merged-chr3-144692216-3	6.1313952222004	0	1.35495876994894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7914989-8	38.780329163818	0.249281984494941	0.400734566052735	0.622062596072974	0.533900708718213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7281193339826	4.05667366692275
Merged-chr12-35336521-5	16.659441105829	-0.936575774492309	0.493455594730461	-1.89799403329066	0.0576968680330908	0.650558815476205	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99241649899978	2.63427303150766
Merged-chr17-87531785-10	49.6419073590201	0.0964730418791344	0.257876005339467	0.374106314203749	0.708325221181476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.71155689317025	5.81234872256888
Merged-chr5-122911368-3	8.99727972797271	-3.21198813206396	0.780031060508583	-4.1177695282669	3.82556990203808e-05	0.00265586403965374	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81792391323078	1.85449916425446
Merged-chr6-108574113-3	12.1022812678366	-3.05983556569362	0.619530413785405	-4.93895940797749	7.85405578828838e-07	0.00010514261665396	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03392928270404	1.47418322843784
Merged-chr9-25130583-4	6.24958526554644	0	1.37184529547336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50854059-4	9.91069616677804	0	1.35859166823875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94304558-6	13.509746567833	-1.00200963340987	0.888378066799357	-1.12790901853296	0.259358344736189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99578006370328	0.953310774576147
Merged-chr6-29171232-4	7.15940216497311	0	1.35371734755379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6872812-4	6.99578450753625	0	1.35970109488949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142295083-8	22.2374165538008	0.365061547206894	0.456976839236479	0.798862252662175	0.424370288698797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67440831528411	4.98240375605645
Merged-chr4-141858764-13	77.7257759134094	0.228189609563376	0.208568272126403	1.09407632923708	0.273921503008235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.64412366392041	6.87106373304491
Merged-chr13-42363326-1	2.27038288291984	0	1.50208897156594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98370956-4	8.86044883393652	0	1.35300701412607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3159064-2	11.4398927675381	0	1.38953100348929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88251713-4	16.090003069253	0	1.34946465100991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113611066-2	5.82555137486084	0	1.37112799645468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65190809-4	20.8295551668833	5.33845220837995	0.930359945853684	5.73805034510753	9.57726492620928e-09	2.23208327542997e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	5.39406707409264
Merged-chr6-113837449-1	1.90919159151762	0	1.66831218144847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86492447-1	1.91737617232968	0	1.50676117576635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129353960-1	2.21767070033525	0	1.41770110904849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152779238-4	6.32056603354907	0	1.36601148076514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43116963-2	2.45985482958369	0	1.49425107206366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126884755-3	6.28505841799178	0	1.34822728046774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185224386-1	2.70154633914154	0	1.39855552610814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134533032-1	5.67940388048993	0.688172230060597	0.906635385915048	0.759039676535501	0.447828822682314	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26008002381647	3.17209132907286
Merged-chr13-63148292-2	3.05001603988746	0	1.47257994068945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6909834-4	7.25528757646179	0	1.36004738912174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143035587-2	6.69728086293138	0	1.36630773750488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-53011467-1	2.87047622520081	0	1.41001578163572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170703136-3	5.02342235860697	0	1.37221359930037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17601132-8	27.1249293760758	-0.248947633273383	0.40686691574569	-0.611865019344523	0.540627067202168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0048660043065	3.51376865783736
Merged-chr6-87153158-4	6.24793055944669	0	1.37350196045672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65749998-5	21.8238553817166	2.85145012096629	0.514346682116801	5.54382913336021	2.95927621717063e-08	6.00236178690963e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16680051662379	5.3213862658163
Merged-chr12-87407001-6	24.4730884577291	-5.29950653389059	0.99947936285063	-5.30226709111411	1.14373338886338e-07	1.91889516312421e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19232767572531	0
Merged-chr5-3503940-2	4.69804533108461	0	1.36775872698941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49827575-4	7.97019683084645	0	1.38189572189704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27716451-5	28.6093172765107	0	1.35782137286302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102907145-4	9.49481959770589	0	1.36248278086149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50397242-7	14.5718583105966	0.266509393897386	0.757736997257812	0.351717541656092	0.725050103779846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	2.06239089973625
Merged-chr18-64991669-4	6.56511565100517	0	1.39850348757204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-63567261-4	10.1142038365485	0	1.35614657441462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80035054-20	115.550012321119	0.179138282576005	0.16960246210702	1.05622454031928	0.290865641592731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54653422983502	6.79905020966246
Merged-chrX-102008133-3	8.35797291473865	0	1.34877053634996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56466676-7	24.57371888293	-0.381771259049625	0.408916758601435	-0.933616074712487	0.350501970399866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54890536774039	4.2107745456171
Merged-chr8-66393118-4	7.27501418133335	0	1.36165046474256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86740233-3	6.46740434047998	0	1.36581681118529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-101995026-6	34.6214270747814	1.52168934694765	0.356880306084008	4.26386472160628	2.00921114592137e-05	0.00157375660923833	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65947747767	6.04793040660893
Merged-chr15-79694700-6	17.1924125338332	1.33125978651828	0.506807708656916	2.6267552047427	0.00862033240310513	0.182260851458729	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12097634090368	4.32715418674237
Merged-chr10-34113477-4	14.5072361657347	0	1.35687256817121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45786892-4	7.7712856181253	0	1.35497594990552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21785952-4	11.7086057219506	0	1.37104335140657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74804015-5	29.504668723213	3.50346547311573	0.443853825900702	7.89328663779394	2.94330552642304e-15	3.33323218980896e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63929222501099	6.50085607109044
Merged-chr18-60932434-6	15.6414926140338	-0.037133370072389	0.685803642002043	-0.0541457755517116	0.956819022098128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	2.19776446004195
Merged-chr17-71504013-5	18.1460710267495	0.72545484790978	0.570219514157849	1.27223784857871	0.203288623656214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19929905941661	4.24603374874919
Merged-chr3-109130347-4	6.38384632081962	0	1.35644178935618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-98999329-5	11.1506164957126	1.30369778617656	0.997530354150515	1.30692542913821	0.191238038780655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.04567094108452
Merged-chr13-20120876-7	26.7867295938652	-0.788522424602291	0.451471201456938	-1.7465619557962	0.0807133512787199	0.798793557647715	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02076924367451	3.65541988565392
Merged-chr11-31877781-6	21.6419425952626	0.55713245677208	0.495444968487567	1.12450926380951	0.260797042754466	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37375984762532	4.97892747991936
Merged-chr4-45286546-1	6.15402005642024	-0.423344016228198	0.915808691313708	-0.462262501157223	0.643893087273171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81495750800846	1.39949824061849
Merged-chr1-87035945-3	13.5990108513606	0	1.36424174969711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53863646-4	7.22794477565626	0	1.36103206897225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6456272-3	5.48632637375394	0	1.40741512137768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16058015-4	12.6988558416116	1.22527295805245	0.621284271523594	1.97216155987287	0.0485911663168877	0.578739528882493	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39265944137668	3.38234147436671
Merged-chr16-84584106-8	30.3248327079549	0.942454335930326	0.367001386212835	2.56798576609127	0.01022913562427	0.204455039164189	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30892476039242	4.91865437151372
Merged-chr10-98572981-4	6.21659158232807	0	1.38035544492868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64180367-7	23.6337853042007	-1.03969801310162	0.406668348644513	-2.55662388422185	0.0105693428468075	0.208695571307522	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2470801810158	4.11069562165024
Merged-chr18-70437646-8	21.9674481044004	-0.367738419418497	0.366932661276341	-1.00219592919135	0.316248973515374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74487135735738	4.39679825685002
Merged-chr6-31075944-5	12.454253849149	0	1.34306572863111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156253073-3	20.7140592002935	1.88824644874108	0.652572205883371	2.89354408863461	0.00380920808749214	0.101452593056338	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	3.85318567052353
Merged-chr10-93909201-3	9.44605490444753	-1.54210072315033	0.682157930419861	-2.26062126434737	0.023782719829547	0.362943533749115	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34733622001446	3.38647958105424
Merged-chr14-44047955-2	6.99506745481742	0	1.38019419774665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140674470-6	21.3535204852721	1.56370987368602	0.407364594136559	3.83860035013703	0.000123737642700687	0.00705058125740737	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9846370973059	5.66318937892627
Merged-chr9-40781703-27	183.09667881829	0.267901983132564	0.217276701076081	1.2329991287872	0.217576089212709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.69898196931383	7.93036384553248
Merged-chr6-34373956-5	13.7961703394127	0	1.34045598535362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117908401-1	2.72144185394412	0	1.41318668988567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73492437-1	2.85315797349936	0	1.4154799797916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106770943-2	12.6509005092966	-0.568384838237702	0.788112620346536	-0.721197483156381	0.470788020087817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	1.19182800327718
Merged-chr12-119082459-2	3.56787795547435	0	1.52417476592711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88866656-4	11.6406950268642	0	1.35192057888442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106612257-2	3.85414552479119	0	1.37867967201716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15933114-3	11.9879192813021	0	1.35676401727728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-61722581-6	16.8142855295023	0	1.33993589602248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-39197130-7	28.4974532859332	1.21917722758131	0.344562959081763	3.53832933995672	0.000402667480844166	0.0183015063471639	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69458950760868	5.93108367775821
Merged-chr7-92879727-3	6.5570621545956	0	1.36633836730187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64127011-4	7.04565912443107	0	1.39172366087859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173770856-4	11.2882830831542	0	1.35404072518964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52587984-4	14.6513244760201	0	1.35088732466669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107564810-2	5.71876229492655	0	1.41936710353178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57570499-2	9.01784551828104	0	1.38337163904754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134460496-7	34.6085735398319	-0.852555845151137	0.334428187110063	-2.54929422223179	0.0107941191535223	0.2115966545497	C57BL6J_F1_Control-BALBCJ_F1_Control	5.88192677329508	5.07465899544184
Merged-chr5-138694891-7	49.8110129665318	-0.250763680791094	0.436852199499087	-0.574024077430835	0.565951508223463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1740366319613	4.19303653449839
Merged-chr8-80314093-4	9.80448577003216	0	1.37246617830924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128643744-2	12.9582432981333	0.112893676089272	0.557255690705991	0.202588646418749	0.839456564835393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95486718963327	4.03920946097327
Merged-chr3-41405025-2	4.41870280235417	0	1.39383231407769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118202760-4	8.22632237507495	0	1.37167591986631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120159293-5	11.7026568304924	0	1.35427286405391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43737722-4	18.6091801886264	-1.23631971194328	0.498383322892493	-2.48066027725003	0.0131139291954165	0.243462970518782	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96950346501364	3.67766789303415
Merged-chr3-146584148-2	6.35640775755332	0	1.35472365412061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81101430-3	6.21980521623219	1.73624798699376	1.28894857295334	1.34702657920286	0.177971672552378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.879366456215217
Merged-chr1-154794816-4	11.1358777107283	0	1.34805916518326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46497718-2	4.49759318696101	0	1.39939552385761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126086392-4	10.7262279901059	-0.0948645750604902	0.715433697883586	-0.132597297752567	0.894511869630872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71797405654368	2.66126108421551
Merged-chr6-116037446-3	5.17530345013278	0	1.37652208819123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-112774463-1	1.73688333480834	0	1.53775529897183	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51908729-4	7.65759072365581	0	1.35348369973321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10968040-3	9.16271301242393	0	1.35912985385559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25592260-3	10.8034266223075	0	1.35714416297574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133615662-6	36.3332436505099	-1.75514506320577	0.447385138577289	-3.92311883400336	8.74100094519603e-05	0.00526579709154894	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29235213514987	4.59108924932884
Merged-chr3-96737534-2	7.85489232012213	0	1.39917684973221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132799934-2	4.67185508402684	0	1.4426020616587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83125091-4	9.06608926072038	0	1.35014261776203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-133986354-4	14.6923879695738	-0.44388344790926	0.826740451029526	-0.536907861900914	0.591331260113163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7821740460218	1.45165290330136
Merged-chr14-13356172-4	8.39609447803897	0	1.34852045975617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92093923-4	5.80248409199122	0	1.37401015585189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-91274684-2	8.49152371045276	0	1.4055725133131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13774894-2	3.9241316192133	0	1.38639210441786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105748438-4	7.44181619608545	0	1.36762332225315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4199040-4	10.7733579361234	0	1.34464468319885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16110837-6	22.7892012243204	-0.0429093003113668	0.566267536844589	-0.0757756670115158	0.939597575364759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14637975729418	2.97519421385983
Merged-chr4-34959659-3	4.42963734027382	0	1.41104517037759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105016421-3	4.25884060603307	0	1.38599012044956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124001104-4	10.7943427741888	0	1.34885771937989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70549460-8	22.5729239871297	-0.0878685466938469	0.327525262809995	-0.268280211242274	0.788483637220635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95626175445348	4.83033828242653
Merged-chr11-70795700-8	27.519157543017	-0.318713243479829	0.408564299460589	-0.780080990680323	0.4353432047481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54035181441239	4.23671583174916
Merged-chr3-15194563-4	7.52757163179347	0	1.36631148519094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58479147-3	6.64442513414476	0	1.35500014146813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119875024-4	7.16236087588573	0	1.36153974201712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50522658-3	10.4085013949823	-3.78927914789633	1.10698185806395	-3.42307249237451	0.000619175622769537	0.0251569979547387	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31447273151311	0
Merged-chr18-64598093-2	3.28828709111337	0	1.4392705281796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142610786-2	3.13487581449457	0	1.44821288524436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-150626426-2	7.16989903297683	-4.42514650418528	1.1368369778666	-3.8925075365595	9.92134165210987e-05	0.0058304239012653	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64801318249997	0
Merged-chr12-102296577-8	36.228211318514	-0.812308482196732	0.409156462074331	-1.98532482678756	0.0471083435832916	0.566665733313597	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77018532568746	3.98298438120556
Merged-chr16-93818895-7	27.3771711012783	1.32238875241278	0.470155909268888	2.81266006944196	0.00491335620576951	0.121623465386806	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15813062208874	4.30925855853628
Merged-chr2-103683086-8	35.9929123694333	-0.612598279787205	0.357407330645696	-1.71400591778707	0.0865276390341176	0.831280551043849	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6961885977728	4.15794067343167
Merged-chr9-40397303-6	18.2199208555275	0.345933967889696	0.463445989510638	0.74643858339345	0.455402519116034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56711505654863	3.9371185170562
Merged-chr17-27587454-3	13.7950138153235	0.84970010157661	0.695370129279509	1.22193931806793	0.221730575421025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73752739441368	3.59429694604359
Merged-chr2-181276215-4	12.2346638209421	0	1.37805215506776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70472846-7	25.7870441296516	-0.0772601912805802	0.369349139392547	-0.209179291462942	0.83430827784623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22503585887017	4.08320809480308
Merged-chr16-48829257-3	5.28948749115914	0	1.38630215477758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166976576-4	9.09276570392568	0	1.3624544280743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107823277-2	9.2966362409965	-0.952640943311684	0.755525186253681	-1.26089898873579	0.207345242602263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31387409893957	1.34263109599227
Merged-chr19-47432551-6	71.5997300413422	-0.663307429986912	0.432843606039183	-1.53244132691859	0.125413565846258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21006948081922	3.35758697628977
Merged-chr11-5732934-6	16.7496552165429	-0.951696609794569	0.747952010276901	-1.27240330491556	0.203229860435719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37705875126183	1.31037834433945
Merged-chr15-67355505-6	19.9883319509475	-0.815441074626002	0.545842924089958	-1.49391159734373	0.135198726810386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04865566665339	3.29109980716793
Merged-chr6-128799284-15	76.0579773008917	0.345772198363058	0.229452619999448	1.50694377934708	0.131825068474644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29810509327197	6.60255862215099
Merged-chr7-98809622-7	47.0503277594129	-0.296362297108204	0.446926511451349	-0.663111920001785	0.507258876971494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32021032761234	4.16531512221797
Merged-chr8-10835285-2	5.50596269720654	0	1.41840580487173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80263097-3	6.50604749088064	0	1.39007615799494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79978319-5	24.2104005408312	-2.50821490218085	0.419035085279365	-5.9856918675644	2.15471949363969e-09	5.71358033925657e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04283703820231	3.50683849188975
Merged-chr1-191447598-9	31.0964634205454	0.136866001979095	0.443320743438127	0.308729072584435	0.757527626708011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03650898109611	4.26593507051474
Merged-chr10-88334124-4	7.60539423509414	0	1.36724093435025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121927593-2	11.5631929965424	0.717680780296038	0.693543082449102	1.03480345844082	0.300760707475787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50451656688147	5.02576574281664
Merged-chr6-94269364-2	3.33699150584506	0	1.45771621663869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105894175-1	3.85231684268367	0	1.40044415674965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9952954-5	13.4834773056823	0.373279168401155	0.624853503218836	0.597386693806253	0.550249235494982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17585887006086	2.67453763829544
Merged-chr8-38294491-1	4.03029249216785	-0.928637290348195	0.864561714583485	-1.07411336250944	0.282771876259487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31742847155177	1.67681329176461
Merged-chr3-144604429-3	5.82591892767107	0	1.40002929278235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95906350-2	2.35218809767291	0	1.63534794269887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120868618-2	6.09977871822803	0	1.38941721152342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115729396-4	20.8655546269331	0	1.34375304773459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37098654-1	1.95309384356207	0	1.60812400159517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16869834-1	2.99633466750517	0	1.40106425008841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59960293-3	9.67538336070162	0	1.34512540157653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33514737-1	2.13839965867744	0	1.49178237364757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22672027-1	2.35419439117613	0	1.45561129139319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154942101-1	3.72913097044538	-1.71073468294156	0.89658347186609	-1.90805958019832	0.0563835161017219	0.640533239660084	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88814060540402	1.10718024078827
Merged-chr5-114766635-4	10.8009672899095	0	1.3480559492113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51316475-1	2.56005349435552	0	1.50225929266157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89776245-3	6.04976354546033	1.82291637316644	1.34385160609545	1.35648635972755	0.174944472437242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr12-70753152-1	2.40864107919796	0	1.47750171600381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24593687-4	25.0151031351913	0.207785047037478	0.820525483969242	0.253234117766008	0.800087303357343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.75107117680423
Merged-chr16-33178595-3	7.43415933500685	0	1.34603513852062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39060329-4	13.7264674683333	1.05456767857694	0.587611872673793	1.79466707127337	0.0727067599380894	0.749813463000304	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52096057460152	4.67837445544851
Merged-chr10-111509400-1	2.32325864991962	0	1.54349471477483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59396881-3	7.64943933826123	0	1.35987660267008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46869687-4	9.26098606350481	0	1.35451205643643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15792947-4	8.42253605901895	0	1.35443913187493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109214246-5	17.470185805776	0.634934774828353	0.635674754054514	0.998835915345951	0.317874184569979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57074540165941	2.9081973936408
Merged-chr18-50014704-6	13.8860890578425	-0.0381849963895181	0.528398758358753	-0.0722654922735314	0.942390626046582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21942711688408	3.18582226233236
Merged-chr5-106709747-8	23.020728907881	0.447750502915017	0.382693118620429	1.16999883491272	0.242001437705034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42285777157871	4.89050482894062
Merged-chr3-139025250-4	8.05051051498285	1.45686504674532	0.878995704552384	1.65741998419345	0.0974345938403023	0.896032327282185	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	1.98274544168934
Merged-chr17-81706321-4	9.07881627749678	0	1.35579913551191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13438084-4	8.24213851011949	0	1.34394752061228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73374483-2	4.44464449211654	0	1.39290808929199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52851021-8	24.4578938149455	1.14001766488385	0.542806330358882	2.10022912616017	0.035708690389197	0.4740143347659	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18481160569239	3.57094731170924
Merged-chr8-66394380-4	7.14365012111744	0	1.35074168706791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72595494-2	4.31436801914085	0	1.36938428648698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107869912-4	6.98043317114791	0	1.36290090783849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53397464-4	10.4149998439027	0	1.35749500139957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24338456-4	7.07887577144035	0	1.37149020549533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104042865-4	6.06916242906209	0	1.36384922890662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136466118-5	16.0471439151695	-0.288384807873125	0.508068525882936	-0.567610062780334	0.570299772781757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87713409917773	2.6522423130697
Merged-chr10-99451401-4	11.9793783359376	0	1.35686371814574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98069452-4	10.5087234511107	0	1.37479752948371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91461570-15	94.2039339517837	-0.273227485209955	0.239641890006735	-1.1401490999853	0.254224189027829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70577448391155	5.41788591704271
Merged-chr13-91631626-5	20.1129493997464	-1.55350991323847	0.60914317593165	-2.5503198174427	0.0107624139953548	0.211051249052486	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92223933358191	2.81047113378861
Merged-chr5-65984265-4	7.34853589539151	0	1.36845254922668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27759044-3	7.3529224728117	0	1.3749011810725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89346261-4	7.4242480148315	0	1.36744388395395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37613128-8	21.607141362738	0.143725545903331	0.353492958527625	0.406586729483888	0.684311545558896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73395222736221	4.86049385415755
Merged-chr9-96525297-4	7.72181605518117	0	1.35740449705461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91694900-4	7.25648739459891	0	1.36547792455832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134513983-4	8.57172161881831	0	1.3516654760699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80207419-4	11.4587880238454	0	1.37033635985784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-8660722-4	9.38905005402904	0	1.35300098181126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93817126-7	32.8264886105394	-0.378976713838294	0.332967036339176	-1.13818087821838	0.255044961566373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80558892764213	4.53070285363611
Merged-chr16-23346969-3	10.6676790369402	0	1.37240303917183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5074793-1	4.60837044578238	0	1.42265791521381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12656026-4	7.63117607999101	0	1.37820368796778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159144875-3	7.00722026771917	0	1.37479449562316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115530694-3	5.10163740104602	0	1.37825442026649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23231974-1	2.47654476451512	0	1.51951767026328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127035716-8	47.2232797212376	1.08275578428202	0.311862070245396	3.47190597250261	0.000516777305199693	0.0219275515412352	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24094127553393	6.36622289287685
Merged-chr17-44789129-1	2.73337411878615	0	1.49420945202206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118723135-2	3.57612445879886	0	1.38461949254528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19237877-2	5.97915387743501	0	1.37549629742903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74617555-9	41.3282547032831	0.545316700298466	0.438061282321241	1.24484112681424	0.213190155226516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43953623156434	3.96731357602491
Merged-chr13-31225605-3	13.130125781374	-0.535068473065433	0.487055316316016	-1.09857844713118	0.271951982973163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19022273235339	3.32874847127968
Merged-chr6-87518837-8	26.6173688560337	-0.00677510994483847	0.42892089618235	-0.0157957096638121	0.987397371203147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6134825001831	4.05385671259456
Merged-chr2-48768007-4	11.2584889441795	0	1.38032918998424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47068528-4	23.1927724147682	1.07986823116727	0.433494992477206	2.49107429130005	0.0127357486715983	0.238616331570045	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75750484009742	4.92195098258317
Merged-chr2-153557600-6	16.2027685463796	0.600377190944818	0.63655699205241	0.943163296359466	0.345597383947723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58266972154474	2.79750046103448
Merged-chr14-76687215-5	16.3959413820466	1.80954265889636	0.655568820214268	2.76026345838858	0.00577547650159198	0.136737300406134	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38345539793716	3.97899401331522
Merged-chr14-45047549-5	9.54653903035959	0	1.38832133137479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104382074-4	10.7420689606904	0	1.35077706596575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-123580308-4	11.4093606705111	-2.98092680489116	1.1675369896354	-2.5531754722581	0.0106745703082837	0.210162610426654	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	0
Merged-chr3-78312912-2	5.34293635168842	0	1.38709034811261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18765809-4	6.83807190958458	0	1.36890762101705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77967089-4	15.8968577092947	0	1.35406737516117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121374348-4	14.3138716993702	0	1.35056128285327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72815971-3	7.2298267692071	0	1.37186775124156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106929704-2	3.95033029353662	0	1.37443360688494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69254601-4	10.4587538444004	0	1.37066817332686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-39341174-1	1.36438421287079	0	1.75144688300548	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32159437-1	3.03692537606864	0	1.39799844041766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125872780-2	4.66471360530253	0	1.39870525810585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103557302-3	3.96128282042005	0	1.4465714636202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106199952-4	7.05728673125505	0	1.35667988045969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51636338-4	7.83695538672626	0	1.3570760326978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4204007-2	6.38906620355999	0	1.37349424749067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101767424-8	22.3163905224839	0.650634949050062	0.553315355241066	1.17588449857242	0.239641034111258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62053038764832	2.69824287067429
Merged-chr14-58309037-4	8.09382665965539	0	1.38709798340232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41051726-6	16.4972477491961	0.506634317624852	0.670591640556629	0.755503479292282	0.449946945490165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	2.2505070961916
Merged-chr15-100447153-5	20.2019682194452	-1.34516752982361	0.420376991420725	-3.19990760026476	0.00137471651920958	0.0462065020961246	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25498231494798	3.86905181231017
Merged-chr10-94360883-4	9.80439164997667	0	1.36488454599673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63014857-4	10.0439054919969	0	1.34388876998525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93977234-6	14.0102590963585	0	1.34855958722911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52767463-2	6.46259266377172	0	1.38405857139749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91021249-2	6.68600338768147	0	1.3546190140523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123927416-4	9.74108429395042	0	1.36257302613704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80018816-6	26.3934225869923	0.571897456463812	0.355450108212391	1.60893876032269	0.107629733025209	0.954013110300358	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26676837753353	4.75248960945079
Merged-chr11-34737379-4	5.70761541747961	0	1.37577968148877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102009843-4	12.1043690507574	0	1.35330644182395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38110821-6	43.6414224906009	1.07900827617509	0.347612744002916	3.10405269884477	0.00190889326808765	0.0601539299478124	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19239491248087	5.15406490217129
Merged-chr2-156295921-1	5.86205410107891	0.765983599384583	0.821185647073738	0.932777627220026	0.350934794937386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09927897987273	2.7361950385808
Merged-chr5-121824317-3	10.2757621858664	0	1.36237259991236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25242580-7	24.479362011297	-0.312497903863423	0.444630429074105	-0.702826175244385	0.482164082807381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46647248825746	4.32355804964791
Merged-chr19-42072372-6	34.9096217276217	-2.09224051871846	0.40837315538102	-5.12335468467892	3.00146982189048e-07	4.45783874448482e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.15906651355417	3.80035336761357
Merged-chr4-43558827-4	7.08068985491043	0	1.36947609038207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8981002-5	15.2635590531697	0.612357713428078	0.55800704003001	1.0974014116294	0.272465956616432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91991443973346	3.25792575753088
Merged-chr10-34532828-3	6.40376839493006	0	1.37647663663278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99046662-7	21.5853602683218	-6.0180665584612	0.995708217492459	-6.04400611819474	1.5033380662076e-09	4.14822101223244e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8210232503748	0
Merged-chr15-93270442-4	9.23800805046898	0	1.36018042322842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128596527-2	8.94625659522547	-1.34541125124018	0.749890710966719	-1.79414310854144	0.0727903299226211	0.750056485711688	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93598370173519	1.92627661828565
Merged-chr16-92038150-4	10.7612530960059	0	1.35849015990913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113515268-4	6.50669465306139	0	1.35424082134306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14998771-2	3.70215651493311	0	1.41415164202347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133940623-2	9.6327749012	2.71004905895313	1.14542069119632	2.36598577254847	0.0179821354393166	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.11005512232597
Merged-chr4-56891900-4	11.6427757226778	-0.0350278898648693	1.34267767980569	-0.0260880853176457	0.97918708036882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.601513806634888
Merged-chr4-147814691-3	7.90862309766166	0	1.35295328714705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6518774-3	7.46857160484766	0	1.36156082042912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28793143-1	3.60185973188696	0	1.38652193019302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100944515-6	23.697264941499	-0.0478963793540476	0.522378885291235	-0.0916889650456385	0.926945165076449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59112047591875	3.07965357752435
Merged-chr17-26487422-6	15.9557347294714	-0.613378993413065	0.528247464592516	-1.16115842389555	0.245577479035762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7936567109409	2.27617179659865
Merged-chr9-106341432-8	27.9552679358959	0.323087795258628	0.369919653582894	0.8733999184129	0.382445135470175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20379199510752	4.70162920271862
Merged-chr7-101851900-3	8.11392327298687	0	1.35363543620196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32115393-3	9.82771233849489	0	1.35209944508427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-21630789-4	7.25557738494283	0	1.35170875279381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132212157-2	5.6549869424618	0	1.40287381494234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121808452-2	4.55665514044512	0	1.36277105040789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31808212-10	50.4120280497476	0.265519508680334	0.409131749084392	0.648982899211678	0.516349429602946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52043391845485	4.84685945014734
Merged-chr2-130729460-8	37.444783703103	-0.225542145443548	0.251089567241401	-0.89825375033089	0.369050283419986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05414193191784	5.83196595454675
Merged-chr19-37495406-6	27.9464667580642	0.858338150640568	0.374398385461708	2.29257973316863	0.0218722122909718	0.341750959449535	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80446783493042	4.65489397221965
Merged-chr11-62609234-4	7.14050293027759	0	1.3628312128368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-51892793-4	10.3027222823978	0	1.38717848026201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110038103-3	8.83851828953651	0	1.36158012519054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40663262-3	7.43235449835213	0	1.35126148615413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37386392-2	4.07769021396342	0	1.39327908531973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29259696-7	26.1639673719527	0.0453607102934854	0.322875842845639	0.140489638040749	0.888273138942246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37197300520586	5.33613134040754
Merged-chr4-9097218-3	8.04759172418015	0	1.36697604259683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24651333-7	24.9762896274884	-1.47859874745487	0.513095516780052	-2.88172221175088	0.00395508246771323	0.104236526553657	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2624066277417	2.96460623990218
Merged-chr9-21602147-4	7.21512514909671	0	1.36416339080268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21853756-13	41.4883161627834	0.357789606478593	0.297097460182378	1.20428362551116	0.228479973364708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17817131723123	5.71497799640244
Merged-chr1-193897013-4	7.02885393067223	0	1.35743286307621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61224455-7	28.7897424127237	-0.442371974458678	0.410751916863836	-1.07698091304422	0.281488792879985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31367855662167	3.69963464278207
Merged-chr16-76410511-4	7.13532864075399	0	1.38143420034662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86787318-1	3.01520441192467	1.46179549351521	1.32392005062278	1.10414181946076	0.269531622925997	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.30064958020929
Merged-chrX-53005119-1	1.71938902394544	0	1.55373094346866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96878992-1	6.66734429879814	-0.214281514007129	0.76019435634669	-0.281877275486382	0.778037614819887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56788313220855	2.22017358685111
Merged-chr4-35980800-1	2.99504768974485	0	1.41072363878062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34112108-3	3.97076604717644	0	1.47549966132551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83957112-4	7.65759944337705	0	1.3596663832404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35333896-2	4.28898811211992	0	1.44362693624881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85304469-3	17.4110751345892	0.781807232663087	0.647594572850094	1.20724796877515	0.227336662012851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	2.99629037551239
Merged-chr15-102283066-1	2.75431217321703	0	1.4258207767709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122693915-1	2.33606192439799	0	1.46308193542644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5239454-1	1.90827011955601	0	1.44912141855532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-131861113-4	12.5484374626718	0	1.35043533104921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21022015-4	6.85123983610343	0	1.3880931747814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6241074-1	2.12301589322189	0	1.50206238369827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100175175-2	6.04972614900125	0	1.41136820254356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46186719-1	2.20216225693654	0	1.45123549805487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-7374710-1	2.47391066991391	0	1.45583933460899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105060231-1	1.93757287241139	0	1.67797798911546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99396748-1	1.7407414526811	0	1.54754783555733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-65950-1	2.75853159886533	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73956652-1	1.86223391594899	0	1.50033677736769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47259183-8	18.3075334657924	1.0022360837051	0.406096808958635	2.46797330487565	0.0135880452616708	0.249285370360838	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61623826364322	4.60798673191425
Merged-chr11-62007587-4	11.1412573620558	0	1.35392475352448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17594170-2	7.3874592998136	0	1.39134868915691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103836032-1	3.13021509056936	1.77386151195534	1.44538594548968	1.227258032701	0.219725623778072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr10-42153031-1	2.39690804098329	0	1.41348029630299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119827149-3	7.11326003548735	0	1.35844925090195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78607948-3	10.7986029819245	0	1.35625695073824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164138822-4	8.09407685596808	0	1.36119447439091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122930299-1	1.69979020095349	0	1.57521495993263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90548724-2	10.3238628937908	0.365122868402039	0.666771599017152	0.547598111467622	0.5839678864523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53487809165109	2.48279872084109
Merged-chr5-135613011-11	67.0973471198706	-0.295765443154818	0.233997910017104	-1.26396617445514	0.206242168074824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04613627499187	5.71771582832128
Merged-chr19-34240811-5	18.4936441347695	0.488062391547376	0.710609278340922	0.686822430304975	0.492194633203611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	2.01786586685489
Merged-chr9-50533488-4	9.02118556245675	0	1.34968439421146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148595547-2	4.3857660132564	-0.0365262280361079	1.1962344516	-0.0305343388056187	0.975640907734559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr9-31198824-4	6.3006515434013	0	1.36511229782747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152784352-3	7.98007723023494	0	1.35299896196575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60076937-3	8.33700850959058	0	1.38311939587428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9066127-4	7.52122108066569	0	1.39618704178255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45277810-4	6.60965928680535	0	1.35296272705348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141761808-7	25.6623995480623	-0.0551516437122206	0.336168619126614	-0.164059464727873	0.869684331833545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26973302827369	5.18650124871189
Merged-chr9-21221039-2	6.69880254903952	0	1.35345880565468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106581671-4	9.08008086772436	0	1.36356014431292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103146596-3	5.17826022244401	0	1.40997388011666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36319054-3	4.46960478831459	0	1.37021658339556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4616251-3	5.73044254085072	0	1.38317441172982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76951607-5	13.1660883690358	1.16994388960314	1.10501303149737	1.05876026458963	0.289708974246417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.32509503823899
Merged-chr19-42019083-6	20.0629140157105	0.181807320033359	0.498036304386831	0.365048327665982	0.715075331555802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30237747674388	2.65558342684052
Merged-chr4-10920544-13	79.3274560382142	0.893102056188304	0.263741737713852	3.3862750125552	0.000708483444211315	0.027847036546553	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6206269470816	6.50090311418141
Merged-chr7-75610024-5	13.8977421568812	0.145360375501305	0.602180717008151	0.241389953872165	0.809252898228529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99529989251982	3.15205572563989
Merged-chr2-170218613-6	16.2443107096543	-0.267274480789915	0.70916795605167	-0.376884599070126	0.706259367109936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67113172082159	2.02497645810754
Merged-chr9-77655333-4	11.7535653039071	0	1.35410261336794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121796226-1	2.45296060013922	0	1.42462362955321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68929646-2	3.74501118789921	0	1.43851696527585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39542031-4	6.56491899741415	0	1.35735954971147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51648499-2	4.53791688210518	0	1.39603309717198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67363922-4	9.35796029122614	0	1.36998133834436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138532035-2	8.80660007787625	0.263869586864315	0.728667019480858	0.362126430605176	0.71725755335384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40173839819892	2.79927826667684
Merged-chr14-21090567-6	16.2791474045302	0.381028087681672	0.554684084319542	0.686928106381667	0.492128034283351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46681188023837	3.28800175674053
Merged-chr12-84031015-5	12.9703473574035	0	1.34150033143059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130802280-6	32.8763904860602	-0.0370701216490329	0.356488798256081	-0.103986778351459	0.917179841030848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3417963607658	4.30462918023511
Merged-chr12-35074742-3	11.0104622987725	2.67941689413843	0.853249445326753	3.14025037908151	0.00168803496103175	0.0542636856574364	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	3.74891354108301
Merged-chr9-45245590-2	7.22930470838152	0	1.36911024283266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152790370-4	8.9290588240745	0	1.35350907929301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15577541-4	10.0565415503541	0	1.35245522136376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65675864-4	7.75183729164855	0	1.37607433057563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114916957-9	46.4563996518129	-0.562861551581415	0.29681694112922	-1.89632555823817	0.057917008680729	0.652364416675456	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31015626731227	4.67432260136806
Merged-chr7-110715772-4	6.45966373121003	0	1.38534176886653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117031840-1	3.11174128743673	0	1.39784356604944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26534799-4	8.05961453932712	0	1.36112212293333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117772813-1	6.03543542255853	1.06305936330431	0.808379140279069	1.31505046374319	0.188492943146794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73830414206781	2.45560054932182
Merged-chr6-113750284-4	9.1356913904473	0	1.34934341756081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171284542-6	20.0035210395949	-0.749917021319551	0.495536916667139	-1.51334238902585	0.130192710640614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22101243586272	3.52981866042782
Merged-chr3-100530427-6	32.2341014100359	0.649806374416025	0.902780585096654	0.719783284159191	0.47165843845761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	1.66683653681755
Merged-chr16-33950312-4	10.2117733343727	0	1.34342714548908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-49567810-4	7.53999394161593	0	1.35144102168926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131479094-4	8.68893610598048	0	1.35276324240731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35833234-1	7.00239482136268	-0.764930355426413	0.728713139317243	-1.04970023752159	0.293855954521947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66843576271652	1.77929101765279
Merged-chr12-34702727-5	14.7413356710262	-0.252136841049343	1.00549758310344	-0.250758276584942	0.802001001510533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.97908007631626
Merged-chr11-62866865-2	4.88138226446333	0	1.39608188490924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119432779-3	9.83916112329452	0.340714852243857	0.622075157132629	0.547706894154616	0.583893177553668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98445054292691	3.27489809003793
Merged-chr19-41771951-5	24.3930555562034	2.31504874483879	0.443817123965586	5.21622222268804	1.82609082740705e-07	2.8855950955529e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5733918792218	5.96561405837718
Merged-chr10-40499440-3	9.157366328219	0	1.34993324908491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48700354-6	24.5485302900735	1.35301546973824	0.54278822552759	2.4927133753189	0.0126771135048368	0.238085825148119	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92387223541592	4.11462122319509
Merged-chr19-45675308-1	2.48400225036877	0	1.41715809864703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21822914-6	32.20085792523	0.933925978474245	0.601444674372628	1.55280446941929	0.120469854629841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97815176992225	3.10924757508555
Merged-chr14-59434010-2	3.24857173477686	0	1.43463676661748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18197356-4	9.85287300162112	0.604858221022076	1.32038807352838	0.458091248435588	0.646886886129285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.600815099743027
Merged-chr11-90558877-1	2.00754001457806	0	1.46290305595193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47562940-1	4.30641640973017	-2.47295241947647	1.4326282321762	-1.72616479553805	0.084317769504113	0.81898983802978	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0
Merged-chr2-181541966-4	9.29404730142341	0	1.34651911982479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9167984-1	4.43913980366047	0.49256668460705	1.23026203927803	0.400375423187169	0.688880023247159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.02674429890598
Merged-chr3-121544844-2	3.75463044143027	0	1.4019962200288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89575140-4	7.98694262687103	0	1.3573210044035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12469007-2	7.56812910201454	-0.511444943764025	0.666597926993052	-0.767246526059712	0.442934955174493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83031286297958	2.08990416182602
Merged-chr5-117420012-2	3.49703048447342	0	1.40079283602943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56737259-2	8.60662277407908	0	1.37816948202684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118102232-2	3.67360915788777	0	1.41652603045652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4410091-4	10.2614218816048	0.0713237042154873	0.608523013356777	0.117207899537022	0.906695307143802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07215202916989	2.94664334300064
Merged-chr12-29713283-11	51.7724635013827	1.71115925008878	0.293783825566684	5.82455227679093	5.72659111722761e-09	1.40221516460079e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82894644001377	6.64487228356117
Merged-chr17-71834812-4	10.609812084624	-3.41225584240853	0.787410266919591	-4.33351708221628	1.46745888376493e-05	0.00120863026458451	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37510667699186	1.06702908365212
Merged-chr15-59520710-6	13.1554943900004	-0.874235415879377	0.717723745898712	-1.21806672953907	0.223198615772881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31205403547308	1.25163494309627
Merged-chr9-45251641-6	14.6739098458484	0	1.3421051424712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3102496-7	19.3725211790751	0.934184113890766	0.508830690482601	1.8359429400863	0.0663660960832925	0.709202482401048	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9250773909296	3.4984580766009
Merged-chr6-148539024-4	10.1660779916323	0	1.36705869936734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54630398-5	10.5268625227214	0	1.36837053066051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103725956-3	5.03551653885883	0	1.36730385150862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90258287-4	22.0459536275146	0	1.35216235143655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97007096-6	15.1266699273	1.07883033527654	0.793158586049279	1.36016977468552	0.17377620496829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	1.98274544168934
Merged-chr17-6142180-5	20.3659509013556	-1.5571047709588	0.582710782070765	-2.67217429103569	0.00753614947242399	0.165251129153488	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59126196927996	1.93827559784489
Merged-chr14-21273701-6	14.5418872620041	-1.0360981796481	0.703780822382193	-1.47218870804274	0.140969925839985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69386385409585	2.12382511851675
Merged-chr18-75839572-10	33.856961825495	0.83463309792481	0.347507951520857	2.40176690712275	0.0163161013387585	0.281561793004787	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79169354708277	5.57424116707411
Merged-chr4-129746288-8	20.8766043992653	0.0170265931772318	0.371050836607239	0.0458874943738629	0.963399921722214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53654423159641	4.64695730283353
Merged-chrX-163164824-2	4.15451122968953	0	1.4047421965401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65342742-1	6.1623311021758	-0.538626470290317	0.673905863324033	-0.799260697382195	0.424139263268348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3632336662134	2.92578411131222
Merged-chr10-49050534-3	14.5436345269038	-1.79773189271062	0.808640317759874	-2.22315392051038	0.0262054227907355	0.388253087348485	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21725004313604	1.62830504494315
Merged-chr13-89892333-3	7.84208415533353	-1.87123451284305	1.27592638647575	-1.46656933556457	0.142493246834761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr8-106556363-3	5.02498296246621	0	1.37874261766771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81126858-6	14.9034847843045	1.02078248677502	0.59873315228806	1.70490390063436	0.088212348783737	0.840956693710129	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42139546294927	3.36234638320597
Merged-chr4-95212769-4	11.8957470459025	0	1.37253078535204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49982680-7	22.6457668995071	-0.821173142155393	0.417210884586766	-1.96824477139119	0.049039881147385	0.58242492883782	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50744778991371	3.69169047585309
Merged-chr16-77300736-4	7.73386050443913	0	1.36865936509197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48242625-3	9.61002427821955	0	1.3653529715315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145229306-3	9.50074777245132	0	1.37994609065744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75596266-3	6.11428544585348	0	1.36740173555582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32249175-8	33.3108762209949	-0.550702873779053	0.333125388435102	-1.65313990736656	0.0983023930516948	0.901116321061902	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76872143091044	4.86537445588512
Merged-chr12-82276015-4	6.37391626298238	0	1.3600520761186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64886301-4	8.15503258786304	0	1.42193015288006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109336996-2	2.81326182761319	0	1.43189442069074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77460020-4	12.8188113784628	0	1.34114349696831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14115178-4	8.39577629082047	-1.03702759394196	1.06650764982557	-0.972358326835792	0.330872316214903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0.67591700901439
Merged-chr12-34696990-8	20.8519945011646	0.488215545802929	0.447368842576314	1.09130430941812	0.275139002152952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65140873098453	4.95303514822672
Merged-chr9-65075343-3	10.61404230627	0	1.35030878173533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10693217-3	12.1713389956449	0	1.3817496787389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31133863-2	5.5229846408723	0	1.37585153321952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83768819-8	23.9984438971385	-0.860389074149284	0.436996607050013	-1.96886900325708	0.0489681358390079	0.581699933582305	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71636445334896	3.90916948856216
Merged-chr10-98725317-4	7.75231601172673	0	1.35454321536416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169326127-2	4.25809343987676	0	1.38388091939077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150568757-2	5.77793260200468	-1.95994864303406	1.12044371298578	-1.74926113674301	0.0802458904588809	0.795275544111997	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40684701627341	0.465515277017237
Merged-chr19-21599176-1	4.11692899010081	0	1.37170754305702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58475654-3	7.19153594786947	0	1.39188214991016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73512617-2	5.15615671102414	0	1.37442107992392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118110215-2	5.62873291418792	0	1.39112023463609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14055604-6	47.3361750958292	0.325699947357356	0.421378552549915	0.772939071973234	0.43955843980181	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48606565810868	3.59807127302391
Merged-chr11-8660025-5	24.6999859588277	-1.26803385657629	0.545382987995685	-2.32503375515322	0.0200701553279605	0.321163842647219	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77898501977443	3.17292023734481
Merged-chr3-107110496-6	21.8850361806565	0.403756601161823	0.507094037821304	0.796216423479432	0.425906253241283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53560137226583	3.15418268090792
Merged-chr15-101240874-8	27.8231865856332	-0.0265613802739657	0.274306058989595	-0.0968311832841184	0.922860459608416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3221603903448	5.27707516226506
Merged-chr2-160048285-4	8.92356329066785	0	1.34788610538511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69486056-10	48.8576884694809	0.237862842084964	0.377451158620386	0.630181777569241	0.528575660166963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84188830179291	4.36856307231928
Merged-chr19-24166655-5	24.3980110199186	3.21345051232097	0.64176470406896	5.00720979503365	5.52247243851064e-07	7.61918982956852e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	4.77072837399766
Merged-chr17-6986296-3	5.8078225414082	0	1.43728899166245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80655364-4	6.71595358977459	0	1.34958267201722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71208863-4	5.91068145990609	0	1.36358861433068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127768210-7	47.4319725698637	-1.05668963342099	0.380668505794699	-2.77587879568604	0.00550527274686917	0.132710031595149	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05675080003129	5.00386846258244
Merged-chr18-67252437-4	15.535399963021	-2.45159197244833	1.0109671025085	-2.42499678413395	0.0153085223605299	0.271060575568744	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7084981770064	0.55634759613363
Merged-chr12-85704749-4	5.29565124911515	0	1.40584585160722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25472624-3	10.0918573170632	0	1.36509957506237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77396236-1	1.92892071234282	0	1.49007622407013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56168110-3	6.61884058583234	0	1.39531365166452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127398553-3	12.2814941501701	2.20212473754645	0.661272423791282	3.33013242094835	0.000868046910261714	0.0321650729345034	C57BL6J_F1_Control-BALBCJ_F1_Control	1.578845274708	4.19659480256808
Merged-chr15-80219712-1	8.0309637224725	-0.18026717265938	0.728256984207244	-0.247532363669141	0.804496248031326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81541700028525	2.83257725847991
Merged-chr11-68441153-4	7.62845890634554	0	1.35895763772373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62583385-3	5.81738807021735	0	1.3646464261739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70572628-1	4.39750669583188	-3.06852670457085	1.23786526231215	-2.47888586746452	0.0131793470488243	0.244427201032767	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52285590321757	0.55634759613363
Merged-chr19-7922561-1	2.02544962196031	0	1.50518915192002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17011349-2	2.26687219661419	0	1.63771504589006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111544916-3	9.83844692708248	0	1.35993453808069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51710752-1	1.87206455869897	0	1.53023848479705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104814917-3	10.8629190249604	0.00303872880099732	0.638138344218211	0.00476186524212096	0.996200595601504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33380954640862	2.40224588862592
Merged-chr8-13600292-4	8.96548755700559	0	1.35523225927916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84238152-1	2.2469183956119	0	1.45409949975408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-135562741-2	4.54729595006969	0	1.40165405957839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100254836-1	1.41860862373967	0	1.66233780249358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5414233-1	1.80601474936621	0	1.74047568096641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75010525-1	3.43976117682435	0	1.38929678590664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129531852-2	2.83997611600593	0	1.47065262837408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69280537-1	1.56591675844522	0	1.494086618249	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135660301-1	3.2368058529426	0	1.38664731333777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78810156-1	1.85307219089574	0	1.48263954687003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68209856-2	4.17562613488605	0	1.42264055641529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-62834134-2	2.60162352390972	0	1.4413331271111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149461348-1	1.75767584367804	0	1.59444222200624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74106086-2	4.39091736332691	0	1.43986819937618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138159556-1	3.02153320849529	-0.848826729859674	1.23385777920295	-0.687945356561274	0.491487192654084	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96104799503838	2.27585415073364
Merged-chr19-46523523-9	26.1261456038878	-0.0665289648392761	0.414465955574109	-0.160517321011618	0.872473578341536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41653192279356	4.28743246814904
Merged-chr2-148586863-4	8.77115236963981	0	1.35806750525084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126211094-4	5.99851391005429	0	1.3642203237532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84860110-4	12.3465346339281	0	1.36709205632636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-38757270-2	7.47001322664103	-1.67176049573663	1.06487419849541	-1.5699136086673	0.116435211156582	0.998201806407979	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87368577136467	0.859510663435501
Merged-chr13-52985567-4	7.09403162579538	0.624341990994781	1.36752681339696	0.456548262804372	0.647995773507395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr15-27671813-3	7.91556162899894	0	1.35109131981157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101230455-4	8.70196075570386	0	1.37423709544778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11668534-2	5.10521827629681	0	1.36634167364114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4551628-4	8.05076802232683	0	1.36666695822391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54302982-2	7.76568237569461	0	1.35734936617074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122559469-5	14.0107285323819	-0.618964121993563	0.698831811018415	-0.885712573804476	0.375772430974408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25495835162666	1.29741062002251
Merged-chr13-109736903-3	12.6648744714362	-0.342223802128047	0.646651590853905	-0.529224403014519	0.59664979015548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73804981657653	3.39932072446828
Merged-chr3-95651989-3	6.5244668919337	0	1.35209030996053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119444673-2	7.0835099423834	-2.22128388644547	1.07942860044876	-2.05783308458012	0.0396061589711638	0.503614314739998	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39994563057247	0.679405493272835
Merged-chr4-120862670-2	7.1865377320815	3.17741154600369	1.16363830420557	2.73058349361656	0.00632223163671446	0.144825195760708	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.00105898665567
Merged-chr18-21669968-2	3.33998401406971	0	1.43209373035594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24517823-4	10.0884588222004	0	1.37103756820654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165669116-3	7.29678714736588	0	1.35757231807223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191119039-7	22.7405958347951	-1.46828828522318	0.405690998776844	-3.61922815554217	0.000295483035468633	0.0144314126909608	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5676379090999	4.04356840849736
Merged-chr4-95905344-6	16.764853592032	-1.79642420087031	1.23828435726864	-1.45073640826151	0.146853273195308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr15-53206170-3	6.51139100368903	0	1.39485799428288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140572564-7	27.9425549768669	0.00992821746229114	0.305237968979224	0.0325261549062624	0.974052458462179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0995071113498	5.20917980956983
Merged-chr1-84002824-3	6.47168148991983	0	1.36639885075895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114927358-4	13.928615864108	0	1.37069039206089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32588419-4	24.128875023307	0.336684397641764	0.593140300048384	0.567630285135405	0.570286038418002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6960750002622	2.35585134365153
Merged-chr2-30773139-4	9.09587202318931	0	1.36816016376913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64792769-4	7.27406427420033	0	1.36472791123572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83572589-1	4.33264961859832	0.336663107343795	0.969300869672453	0.347325704409571	0.728346642040971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	1.62069611143677
Merged-chr2-157156309-4	7.71883758405458	0	1.34579187902968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131470847-4	7.34431985133974	0	1.39768681566117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3022190-4	10.9586185744893	0	1.37623001284297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69575513-2	4.528441629186	0	1.37889686950706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60840317-2	5.83586541074094	0	1.40290838068127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117191711-3	5.22479631241034	0	1.37946568830825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138012334-5	23.6504360764055	-1.93615173341047	0.464407970772048	-4.16907515646586	3.05838134150623e-05	0.00220306582898029	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99446081227039	2.62919620744958
Merged-chr7-16005151-3	5.47962648265086	0	1.39629297530158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28226184-4	7.18886624543549	0	1.35468486197916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108480229-5	23.9292328377595	-1.75909780482252	0.473026334852947	-3.71881579356333	0.000200158946263489	0.0104119044592699	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96469994935853	2.74185191295012
Merged-chr1-75251731-3	8.4543713590068	0	1.36224406788469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80064428-3	12.3969394299411	-1.30398640083864	0.675016577368318	-1.93178426213247	0.0533861393602075	0.616926684541816	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56550782086741	1.33175291456033
Merged-chr10-8505823-5	18.3901118334502	1.53259155517229	0.703690850742605	2.17793304198136	0.0294110221115197	0.418302917571978	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87697405107109	3.04319432018112
Merged-chr13-102906577-4	7.77107010386371	0	1.36537447845114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120618282-3	6.9666879837531	0	1.34911705394221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155853089-3	9.66152622792893	1.76811230686176	0.935607998211102	1.88980033330457	0.0587846689792695	0.657212314782351	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.6454950719498
Merged-chr4-116827984-2	6.32735206124235	-0.316785599181617	0.747636621310912	-0.423716000730625	0.671772944509645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72908043220718	2.11912641430171
Merged-chr5-65260262-3	4.83628912094347	0	1.39563476552494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7397049-3	6.95157550958976	0	1.35049098466837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24559395-3	7.09765947758968	0	1.39044534862573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153510561-4	10.6984605242739	0	1.375410449438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180293243-4	9.35348461286447	0	1.34959167357548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138041786-6	22.4785257761505	-0.198721705358495	0.466524556086295	-0.425961940836693	0.670135578942771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26186822795373	3.35606699659993
Merged-chr16-36753298-1	3.78240425989637	0	1.40513956777472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107142969-4	10.0979973536117	0	1.37817955222221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116093887-3	10.0184140037111	0	1.36654837157945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3751656-2	4.36484158453121	0.269692491751075	1.05216651340444	0.256321112975212	0.797702895887847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27416815045033	2.56691959307317
Merged-chr7-7132970-1	2.83633928346218	0	1.45156068498237	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105207126-6	16.566400059807	1.41697939816421	0.61204864283864	2.31514180244294	0.0206051729655238	0.327125174425499	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92738623187092	3.62611073561024
Merged-chr2-156324346-9	43.361828286421	0.485289543389107	0.326028968535586	1.4884859635905	0.136622781133202	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64000107427507	5.1002472176226
Merged-chr7-45660962-4	8.80225765628792	0.624598094231271	1.36154781474875	0.458741211630918	0.64642001575305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr17-35301954-5	13.8088160717034	0	1.37639242747698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101959591-8	29.4061547198362	0.376558152367195	0.437194804251208	0.861305186396563	0.389069979969242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65666815351481	4.09607229956328
Merged-chr6-40576008-4	6.68023042332196	0	1.3653395984993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101597434-4	8.23097011167283	0	1.35757604471844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22917377-5	32.5512795831468	2.80147964236343	0.358517050713057	7.81407644850238	5.53674844258568e-15	6.0194421718103e-12	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57872402988787	6.27473705799011
Merged-chr10-17527563-1	3.44486543236925	0	1.42850167909095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132815224-3	5.60607316655491	0	1.38004756713692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75076560-4	9.36470588670606	0	1.34732997860233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54116505-4	18.6749394691245	0.0957558734752673	0.536223321640404	0.178574615483588	0.858271727980574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64974215847459	2.71408534489895
Merged-chr1-60940803-4	7.4868922436576	2.93381669068713	1.11916199629728	2.62144059608313	0.00875590202694965	0.184267161549731	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.75107117680423
Merged-chr10-117897970-4	8.01191520137536	0	1.37815101019877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40031540-8	30.1466747639909	-0.0191604320852503	0.376784211135395	-0.050852534471953	0.959443028541283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25134239542169	5.05124079140494
Merged-chr11-61861185-2	3.77853541457222	0	1.40961231944516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12318944-1	2.94120217406276	0	1.42283502981503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11202488-1	1.86321002175031	0	1.58919851686914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-35909161-1	2.94657170949431	0	1.42723594411325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67683799-3	7.58182742651968	0	1.36294315054511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157463323-4	15.9314514343099	1.20756307358728	0.657968182110382	1.83529098582566	0.0664625859774437	0.709652270899207	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69164407730823	3.26369163692935
Merged-chr12-102295421-2	9.58935123175634	-3.04246811530308	1.04640780093666	-2.90753577389208	0.00364288674916207	0.0985682831247888	C57BL6J_F1_Control-BALBCJ_F1_Control	2.035269112763	0.465515277017237
Merged-chr17-34335349-7	31.0266257513866	0.0422674110203847	0.310138514690524	0.136285591818745	0.891595513670329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29006918240675	5.24817454181495
Merged-chr7-132793706-3	6.22747503597305	0	1.37022425906408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34096231-4	11.1524658810769	-0.037384518838365	0.536593564164706	-0.0696700842779581	0.944456253191816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78621889066128	3.75023683463856
Merged-chr11-32571253-4	7.77320941335661	0	1.36546803065255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88309935-2	5.0864902066296	-0.0365461394511468	1.00094624282947	-0.0365115906203299	0.970874436893903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.18984215491549
Merged-chr6-129418110-4	7.24830545616802	0	1.37696460957223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75182572-2	5.00798010694295	0	1.38602523881481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102815441-12	57.4364429772002	0.017525762335227	0.258818560722218	0.0677144725877557	0.946012928296726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19163660434314	5.35886845714286
Merged-chr10-17767083-5	20.3682146366061	-1.43203241046243	0.491609250675792	-2.91294846159603	0.00358033687501014	0.0972145515427953	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54819032077403	3.10817946909412
Merged-chr8-80031434-4	7.49988799503154	0	1.37358895774095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45444854-8	30.3377521946094	-0.917196703593702	0.393106893588457	-2.33319923550848	0.0196376909541983	0.316104602481276	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52742329326268	3.16192837721716
Merged-chr17-10394842-6	17.1312248691293	0	1.34185491338795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116142777-6	16.2418060428535	0.65905399771498	0.637432046155998	1.03392040247956	0.301173376106066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07779785271609	2.79406828879447
Merged-chr16-12469777-3	6.50048544280899	0	1.35140054564925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7816629-3	7.18523468555078	-2.80069601361122	1.17907543913125	-2.37533233299711	0.0175331560515733	0.294616639816838	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0
Merged-chr9-124275196-3	7.47590827135415	0	1.38033851753183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40575249-7	44.9943319169885	1.95624044794178	0.33600373355411	5.82207949670518	5.81198905642282e-09	1.41674400501385e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.024705678334	6.02809036727092
Merged-chr10-43702595-4	10.4508988848192	0	1.34587939738391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70601444-3	12.059613694878	-0.452247738694611	0.526807959617115	-0.858467930179539	0.390634131583983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83073178516983	3.43839156836638
Merged-chr16-45561948-5	31.3717602401523	2.62203476020308	0.404384180370919	6.48401912705397	8.93108919813486e-11	3.37142415084315e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30016801153219	5.77052485660875
Merged-chr9-59725732-4	6.96872857459622	0	1.37177541367423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76016855-4	5.59708948818942	0	1.35956394488264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64774502-3	7.1418539110147	0	1.36399370997822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34701722-4	6.54287951425425	0	1.38567958105612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-61160710-3	7.1371038397624	-1.81779546494813	1.25330551819324	-1.4504009106803	0.146946753304849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0
Merged-chr2-11740688-3	4.15937919041391	0	1.38909709823165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45018175-4	11.4331019163031	0	1.36235657833694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-136277787-4	7.66650570399931	0	1.36231865592461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124574108-8	14.1946455521246	0	1.34214811242106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20938529-4	8.59057177106695	0	1.35210540402586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173534774-4	6.33701596198938	0	1.350335143728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89844772-3	6.06584025031927	0	1.36277115484698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92725597-1	2.92150236827828	0	1.45062888326741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135994943-1	2.73281601888509	-1.3652555627675	1.39863025442387	-0.976137587792912	0.328996286757953	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.790093605168944
Merged-chr15-29824371-1	2.17946873395115	0	1.51101858929929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10225068-1	1.63071459976434	0	1.82702351888922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24703850-1	2.60252026735107	0	1.56979958625013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148233125-1	1.93831630470681	0	1.43544723268473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8880260-1	5.51341284647142	-0.96606264899013	0.887855850909895	-1.08808501740467	0.276557577317111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71013794855404	2.89546280739407
Merged-chr2-128058755-2	3.905482660312	0	1.38438352208248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79625877-3	9.69880222512018	0	1.35281097803587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172335375-1	4.69637392734215	-2.65365487174782	1.10251420616399	-2.40691218027999	0.0160880380120923	0.278782645594067	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37705875126183	0.465515277017237
Merged-chr6-56608419-1	2.60536159870287	0	1.44644494264884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43337510-3	11.7345995262447	0	1.3623278294798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116927033-2	3.10034728275793	0	1.48771865711673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50476825-2	2.63709019701109	0	2.02698677532343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103707510-2	2.4620210903967	0	1.6231076966853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32013107-1	3.02570780094065	0	1.43119240501568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118673882-4	26.8841058435338	-0.500362595014498	0.344403790356465	-1.45283707387951	0.1462689957108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75145022329104	4.90824797956148
Merged-chr1-6204919-1	2.63251209100784	0	1.4474212961764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77820303-2	6.10570412902589	0.325823540629691	1.10297551142399	0.295404147467462	0.767685165380805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.06702908365212
Merged-chr7-64142158-3	8.11204106363686	0	1.35418773496708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-16433353-1	1.95685228992678	0	1.51179244215508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37724407-1	1.94911155931163	0	1.45002469924504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48695589-4	7.18018634401825	0	1.35552281837069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45049878-4	11.9627864226068	0	1.36038669192202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104968182-3	6.49606247459969	0	1.35389804257834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73263242-4	11.2142159495795	0	1.38422008113937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48243967-4	8.35522924142875	-1.39721798607861	0.94562858235472	-1.47755473147754	0.139526998562512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17623743947486	0.97908007631626
Merged-chr13-48227891-4	9.6292653347322	0	1.35984216775253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154096260-4	6.32100315806634	0	1.3566471080153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35026139-8	31.5031581885741	0.348552929741002	0.366933983702173	0.949906373414324	0.342159828096704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12153159578638	4.41606860368523
Merged-chrX-85292969-5	23.735231719906	-5.03852730515567	0.997359766733231	-5.05186540826581	4.37515964026482e-07	6.1613809037605e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91197050322261	0
Merged-chr5-42977290-4	9.00401332549627	0	1.35045926668454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37050627-3	7.95116972680993	0	1.35887333276665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79663570-3	5.32393495684716	0	1.36570108265365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128707955-11	69.0205332897119	-0.407180638287143	0.285321174170998	-1.42709576136509	0.15355229409402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14298757216929	5.43225398347632
Merged-chr7-73531746-4	8.57882277916732	0	1.35666044378772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64929243-3	12.1865549424623	-3.17727373996021	0.578018957163013	-5.49683310657258	3.86672327370695e-08	7.4535890225332e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4523871649248	2.06541838463802
Merged-chr3-101293940-2	4.63509824050287	0	1.38345795875361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-33184069-2	5.65536027907828	0	1.40106723777735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5801459-2	5.38866045575386	0	1.47523000611196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83727694-3	5.04380679727432	0	1.36952634262534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58616237-3	5.09667604999471	0	1.39311501957521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119893103-3	12.7087355938895	0.546379366818871	0.594646446904812	0.918830625597487	0.358184170941118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07651089655187	3.48737317316864
Merged-chr8-26690119-8	31.4288081514882	0.546637538239624	0.37669649024781	1.45113520404721	0.146742215397311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18121583174456	4.61616072028286
Merged-chr11-115173647-3	5.51623644528462	0	1.42056063138723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77869363-1	6.49991278118068	-1.3496583893658	1.20136187418444	-1.12344033747703	0.261250526297337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	0.55634759613363
Merged-chr4-114983409-4	8.21813592032072	0	1.35947899291563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134098573-2	7.61925803567081	0	1.38629580051472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156921728-7	22.3193573282461	0.029316140514773	0.410667789258173	0.0713865106579929	0.943090145154557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24984413917143	3.85609445311198
Merged-chr17-85189785-3	5.62569797184225	0	1.3607810589517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54693936-3	5.65522640931123	0	1.3818131344983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108398305-3	6.62128040233123	0	1.37183152324439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39778282-4	6.17507159209428	0	1.3550783448788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45926786-4	16.8460285643513	0	1.33653985372053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3309412-2	3.33510825101851	0	1.45427755396649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78699182-4	11.7522465411156	-0.349632441446423	0.734684643910752	-0.47589458190567	0.63414948236944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19764823445446	1.61224616757942
Merged-chr10-9908143-4	7.96856568535495	0	1.37096039867146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42018105-7	26.6085213695598	-0.669616959733471	0.437241542302029	-1.53145777550781	0.125656294434344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34032013840784	2.86293949039584
Merged-chr12-111889413-3	5.30998927786981	0	1.378590579648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117912899-4	6.31579487496158	0	1.35104497494969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75195850-4	12.5054684380412	0	1.37175350979135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15743533-1	3.21613244969238	-1.25631768245716	1.18390526604837	-1.06116402932347	0.288615363374226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8405601103675	0.67591700901439
Merged-chr18-39141211-6	17.3905725038196	-0.617580016098923	0.517799857876664	-1.19270024258297	0.232986790610356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04860803325332	3.2858589325551
Merged-chr10-117277926-4	9.72838682440121	0	1.36201650006122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84606262-3	10.549862664423	0	1.35565775174605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39933601-4	13.4119814080817	0	1.35149455895295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184260934-3	5.76897081144811	0	1.37453788868076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36214680-2	3.69541654627552	0	1.4110449700461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70476331-6	11.9164377748698	0	1.35412645575046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6299251-2	9.3932948539222	0	1.36943773851736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118804446-2	7.31818650063933	0	1.35766196299195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69041087-3	15.4143127291432	0	1.37524983840942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118520134-8	26.8329071920168	0.388595015709637	0.341906296064628	1.13655413831918	0.255724721355486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79358944625909	5.1720914696031
Merged-chr3-95972385-2	7.87656326653053	0.391818400110836	0.520024926293841	0.753460806010362	0.451173055179731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10828732516377	3.43127059663549
Merged-chr10-81620452-4	8.55525473674673	0	1.42590516163351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157635870-3	6.12641841816014	0	1.38106037288428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55587892-3	7.36250667887642	0	1.35770680265109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148700417-3	7.43414751145539	0	1.37178866063207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81222017-3	6.55524187143247	0	1.36915524898693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54811452-4	8.06992506665787	0	1.37089082457868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121845908-4	7.2462493264944	0	1.3571649366929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9881090-7	32.1432526086336	1.68132562992673	0.399383913730385	4.20979807179154	2.55599028408474e-05	0.00190853126171102	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41011570775395	5.20721911144365
Merged-chr6-136658247-23	107.81691567756	0.0168464933411774	0.210759623503148	0.0799322615079819	0.936291130939352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.70406274535213	6.76324632609339
Merged-chr8-46817405-3	6.47824633718986	0	1.36491071025565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-94601534-4	6.92993205074501	0	1.35011842117835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104994760-4	8.11599653087087	0	1.37054480534605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94704112-4	17.6455081490314	0	1.34494719957481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90718139-2	7.45476230720261	0	1.3916514664161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158046500-2	6.2659687127845	0	1.36806554968174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40356150-2	5.84349621177217	0	1.36026379533304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111562591-4	16.722498156136	-0.966170731072192	0.635556691498791	-1.5201959856543	0.128461726042107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5841267066007	2.15890824657754
Merged-chr8-125127853-2	4.79050815698348	-0.283129124017952	1.12295598684092	-0.252128424743026	0.800941799744673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.10718024078827
Merged-chr14-15065372-3	8.4976868631807	0	1.37821294353434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18941645-2	3.37318570517043	-1.35140299900387	1.39390361548497	-0.969509644706449	0.332290970452444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr8-70744487-4	13.1374820650062	0.407574637337601	0.693404923792291	0.58778734236345	0.556675041089578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	2.42471782175302
Merged-chr3-51184861-12	72.2629704522678	0.797187014053316	0.224085109789375	3.5575189034319	0.000374374167848267	0.0173049365561768	C57BL6J_F1_Control-BALBCJ_F1_Control	6.31982444512914	7.12249119505917
Merged-chrX-74014807-2	4.7896037950411	0	1.40106295286222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12084158-4	6.47201800356856	0	1.36651713681734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137175765-7	24.7313635267665	0.267517764935969	0.347071710034716	0.770785279241602	0.440834214128593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54909970887964	5.80750642296073
Merged-chr19-12558365-4	7.73680882382323	0	1.37438089795973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73289869-4	9.29197426069776	0	1.34905660157563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62005752-4	9.84975169796203	0	1.3567263110549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96636647-4	8.01445423257619	0	1.35934064087726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86796015-4	7.78381175513969	0	1.35820759240092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83418274-4	8.41219767053828	0	1.34528203480134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147527955-4	8.73767413649775	-3.12856254202713	1.15460384588831	-2.70964153910307	0.0067355959599071	0.151925419412693	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	0
Merged-chr11-26135427-4	11.0671573579476	0	1.37259297642982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31542118-2	3.8095329094933	0	1.38425981784683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108151548-3	7.42263679472145	0	1.3538184611114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45734971-3	6.19859439072184	0	1.38656408052807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50593152-4	6.43109670799175	0	1.36342714340757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32988927-4	7.23218637012532	0	1.36264547246189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5605044-4	7.65789117437138	0	1.34720200766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103965712-4	6.97678064709954	0	1.35793036545713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142570886-1	3.03393531779531	0	1.42819235918539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35919228-3	6.75592699820723	0	1.3896597195732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37535257-5	15.3413437125243	-1.9299541223066	0.667600759340303	-2.8908806577957	0.00384163974333957	0.102116232180047	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31651953856474	1.39949824061849
Merged-chr6-50188198-7	21.5826370433279	-0.402831889135825	0.425067087998766	-0.947690142354646	0.343287220763491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22796711677659	3.91033825790226
Merged-chr9-48282710-4	30.9946843300516	3.04281248618103	0.442647533127054	6.87412051002586	6.2373464229088e-12	3.02728494824017e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63557780014842	6.05471087418059
Merged-chr7-107661368-4	6.9027315534371	0	1.35654074461174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22142742-3	11.1963363163441	0	1.40791131905262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104234016-4	8.50240296869219	0	1.36497566534711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146331149-8	24.0788331345641	-0.535206358400553	0.663115014024307	-0.807109395928915	0.41960345927265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.70656116796365	1.55926189265627
Merged-chr3-27198782-2	4.48944171777678	0	1.38562976739674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75054318-4	5.80096742058832	0	1.35901823815158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137810320-6	13.6434709216332	3.26908768032515	0.981615478782491	3.33031390700953	0.0008674812749007	0.0321650729345034	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.84854179218572
Merged-chr8-69094322-8	31.1933673429796	-0.131946115634752	0.389064344951226	-0.33913700226448	0.734506524639374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00148569996273	4.73105291303452
Merged-chr1-43467138-3	5.48534965724691	0	1.37706816022627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79177316-7	19.7295349222567	0.457487472343667	0.477184768229893	0.958721867926982	0.3376988789745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63068143299972	4.17113711571885
Merged-chr5-125484205-3	8.98855873434265	0	1.348059642782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5771106-8	44.499453704245	-0.156589697635453	0.286459752655451	-0.54663769057916	0.584627669612231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40680354827285	5.31948587343321
Merged-chr16-76539849-4	14.7551064320788	0	1.37138473031906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36409624-6	95.0974585912806	-0.130529403546973	0.426153517355618	-0.306296670638643	0.759378773926967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74704201735367	3.4149822400953
Merged-chr1-82832048-3	16.0700125558992	0	1.37393954645312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67704884-3	4.33057148630934	0	1.37745194580612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102990469-4	9.43626278555832	0	1.34962347932208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66129093-6	35.5173938531974	0.701053893997141	0.349883647498349	2.00367721958326	0.0451046480602796	0.550546430872889	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44130811324915	5.10386110184508
Merged-chr4-139232674-8	24.3109412111766	0.959606678808313	0.443078654445965	2.1657704996153	0.0303287286912583	0.426335495973135	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85900179690775	4.16707911201324
Merged-chr10-122008923-4	8.09201006878154	0	1.37393902265074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95390737-4	5.94681021734353	0	1.36703279599998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80033477-7	23.6191448484009	0	1.34822962265458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85077216-7	22.4752954630296	-0.243504640466488	0.323763766523432	-0.752105904503259	0.451987373434872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15761470746181	4.95659284900467
Merged-chr5-123891156-6	17.0855084887144	0.0536020622542821	0.452950805190401	0.118339699676105	0.905798502591076	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62916575791747	3.71495731854837
Merged-chr4-137871093-8	36.436717633401	-0.564258970318607	0.375415654960678	-1.50302461515013	0.13283269657746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21496733410397	4.64039145126608
Merged-chr11-88107528-8	32.4231267720855	-0.00346246439848953	0.394361921186839	-0.00877991563706047	0.992994730870589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42672101491978	4.33375819398364
Merged-chr14-19733500-4	8.004162518315	0	1.36202973213293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30987893-4	14.1778748430796	0	1.36572042009244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106421971-8	28.1176229612815	0.0425532615300106	0.320461108055268	0.132787600305843	0.894361361035573	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.400237576204	5.44028733478038
Merged-chr1-38011857-4	9.13887940791612	0	1.36912997672159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67646864-4	7.37190357227307	0	1.35744154800656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66225900-4	10.9396980927572	1.56500385933433	1.07217234775553	1.45965698762002	0.144384368687658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	1.6449292036023
Merged-chr1-72229224-3	7.78287447515569	0	1.36964433804449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181922247-4	7.5555651046356	0	1.36893884902094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129585794-8	22.9590771800111	-0.126573150489436	0.423899520887312	-0.298592341469251	0.765251109639491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09753102930749	4.1461345075343
Merged-chr2-52954658-2	2.74483429649727	0	1.54427991328409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111192109-1	3.34880491427503	-2.17680493143807	1.24470152007537	-1.74885697199619	0.0803157458635115	0.795822754173281	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.303163067301871
Merged-chr10-94116460-4	7.0238647375071	0.400745616358026	0.968712497695651	0.413688909053315	0.679101950638521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	0.788686275880602
Merged-chr19-56770804-2	5.22046147186834	0	1.38107707429681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105162865-3	11.054994315079	1.68115493586939	0.882447619556609	1.90510450548226	0.0567664878710851	0.643807534776614	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	2.30396243870814
Merged-chr5-21411060-2	3.66553608523464	0	1.43890676946545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74779546-2	2.73674187809333	0	1.41116816613572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107229179-1	2.23278820177057	0	1.43441509198113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52457415-3	4.5955017341459	0	1.40706614991156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-91740939-1	3.96801930318413	-4.19785204906023	1.37368182254737	-3.05591293424536	0.00224376400399431	0.0681770639983939	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0237869060369	0
Merged-chr3-30823685-1	2.96406958234008	0	1.48591410549745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-16168949-1	2.49296834010694	0	1.54767972064104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67697934-2	2.85887172321623	0	1.4658086007854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181278046-4	9.4027533621569	0	1.36184904720721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164522488-1	3.47714517559773	0.458407643094154	1.2211022595848	0.375404794722124	0.707359439552224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	2.11639961854063
Merged-chr6-72050994-3	5.52567720988958	0	1.40793234932508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48931943-1	2.3255415490764	0	1.49888458746461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52717635-1	1.52928987459401	0	1.59400345528963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53563241-1	4.29618292916785	0	1.4495558286363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88235241-1	2.81499475416284	0	1.41700564177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92822267-1	3.33403082175368	0	1.44140121322769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11439675-2	4.08891454716156	0	1.43911761661876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27744689-1	2.43894850805046	0	1.40374502988293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51778464-1	3.34949431062004	0	1.38893091359046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148945851-3	7.75463520624004	0	1.35765355735029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69082509-1	1.61171604853405	0	1.59198331843088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3129541-1	2.68341738630221	0	1.49039558655302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123516530-1	3.49830605679246	0.558399804844958	1.13449632469554	0.492200629204165	0.622577519699776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73249259224818	2.57439934590533
Merged-chr17-43131056-1	2.19330308714273	0	1.50687332833663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64343952-3	10.2180916655265	0.714955255745204	0.843549207163131	0.847556075773706	0.396685245151748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18993426541433	3.84602956940737
Merged-chr17-3205040-3	6.88872498975697	0	1.36777057119006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59862345-9	26.1743970203673	1.75854739052638	0.440742144946763	3.98996876220856	6.60819977112141e-05	0.00414319644011983	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80505986605703	4.52390750431216
Merged-chr14-122557494-4	7.07551482484087	0	1.37317667665512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43040740-4	12.9062936421842	0.560782042419982	0.636547899456149	0.88097383228992	0.378331983457196	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80618576806959	3.12483591150709
Merged-chr2-93470362-3	7.07229230284193	1.79698547539762	1.26449701898334	1.42110692901625	0.155285675936781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr8-128453677-4	7.04876898312659	0	1.35318798732267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44419102-3	7.71017137429123	0	1.36788638124492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93355339-4	6.86634548326153	0	1.35472990025336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94509893-4	8.23700513367766	-0.69718377701739	1.35581111905421	-0.514218955147481	0.607098916696391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr10-17416298-4	9.3232080749528	0	1.36348013433534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90710239-5	11.4482525436948	-0.609406888116215	0.785460389500745	-0.775859478418214	0.437831960608392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29802325937094	1.26296211256663
Merged-chr11-63806714-6	26.0128267710907	1.08468055695356	0.521268200775811	2.08084927363536	0.0374477044350849	0.48713842228848	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58820913554114	4.68319436635417
Merged-chr2-166041877-5	13.9380515964077	-0.741914619177353	0.655283857914501	-1.13220341111189	0.257548926357011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45391569783273	2.36348447703356
Merged-chr10-121571734-8	33.5932364420425	-0.607637677083836	0.351843016287327	-1.7270136082156	0.0841652195525199	0.818157576833946	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14179502940711	4.55246362985402
Merged-chrX-41805755-2	4.66376172080645	0	1.36272185221534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88538607-1	4.75450222025078	4.24065389448891	1.11533886295965	3.80212152137867	0.000143462325332435	0.00790118393388637	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.62502681167769
Merged-chr7-19503690-3	5.70681298364199	0	1.40511397692123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4940046-4	8.99981045970544	2.72004744565511	1.14149505685017	2.38288149329422	0.0171777231533388	0.291255100715017	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr14-62845234-4	6.92696959480323	0	1.37997229966215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112137618-5	11.9652612378111	0	1.34486864551995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131981797-4	8.88556447180503	0	1.34843854678399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35219982-7	41.0407072465702	-0.116696820282493	0.540206799445842	-0.21602249435254	0.828970213553592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05454104792675	2.60814472268673
Merged-chr5-38505593-6	25.7726790025938	0.940070381781479	0.610584426683607	1.53962390899401	0.123652054065516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94701576741112	3.16155369700362
Merged-chr2-92004961-5	16.5920766010911	-0.785791057654798	0.707119075279058	-1.11125705008692	0.266457720962691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3640534479995	1.5645819449897
Merged-chr4-139171890-3	36.943977851389	-1.68995383558784	0.482310948912615	-3.50386786656595	0.000458552823655802	0.0201724950190478	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91305165092507	3.26988395675859
Merged-chr11-46120298-4	14.466813110008	0	1.35285992868996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84147550-2	5.02229198043676	0	1.41315374983676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32564409-3	14.935299968465	-0.632644501854225	0.70282773809133	-0.900141624421795	0.368044887157536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91665652935043	1.36961656753983
Merged-chr3-131300086-3	6.03916570723935	0	1.36558168149514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79349323-3	7.03243234272675	0	1.40328959411062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112238040-1	3.48023984866809	0	1.41491959107422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63540456-5	22.3020594322724	-0.491755801109941	0.4063315506443	-1.21023287591177	0.226189546260469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48202112649282	5.06285520496289
Merged-chr9-69667450-3	7.51373361818283	0	1.37502407561616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135722354-3	6.6995250573744	0	1.35522446520287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62073849-3	15.7261615413935	0	1.37017738485658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142700922-3	8.38572155037618	0	1.37887524984484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167685341-3	5.61882589229351	0	1.36583977126248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25474976-4	7.65459845871564	0	1.35543534735284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37426185-2	5.38135966583477	0	1.40420991281255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97506478-2	9.38426755728976	-1.76347622751258	0.747759614888722	-2.35834644235904	0.0183565526195647	0.303109105734537	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22612724859575	1.44790810950236
Merged-chr7-80176336-2	4.40780699482256	-1.60928693001041	1.26739657844471	-1.26975798844688	0.204170849771541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	0.376242425970964
Merged-chr13-118767705-2	7.18158030966467	-0.189788815524378	0.726276212987912	-0.261317680698345	0.793847532918505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73381153525686	2.74914625156584
Merged-chr1-54795459-3	6.18438726333807	0	1.37761069798537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35380835-3	9.1577041207037	-4.15897202744442	1.03555117494126	-4.01619169393568	5.91461520654498e-05	0.00379589808751569	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51413226608606	0.303163067301871
Merged-chr4-66891762-4	18.5312264208382	1.76577107789881	1.25149421023731	1.41093028114288	0.158265172390397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr6-83632931-2	10.3577817921311	0	1.39084552579485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77663953-4	12.3111448207808	-0.697327616707938	1.3544094774031	-0.51485730744071	0.606652735916807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr8-90961789-7	16.2294596696169	-1.03765145024208	0.511269595379876	-2.02955829882882	0.0424014573724797	0.527075422206866	C57BL6J_F1_Control-BALBCJ_F1_Control	4.511047628941	3.55043702338984
Merged-chr16-23557900-2	3.90245912631631	0	1.41234264433737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48579440-6	34.648989495726	-0.152634139010644	0.432086751390674	-0.353248829128386	0.723901904087836	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72382744200009	3.53417661761826
Merged-chr9-22165019-4	7.90688737934914	0	1.35415363102206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28003970-5	16.8422384714487	-1.71079253797923	0.511326994817241	-3.34578959319507	0.000820486305956387	0.0308442704740548	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34894356724357	2.50287224925689
Merged-chr11-106461355-4	7.7641585017388	0	1.36100136150478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106957647-6	33.7968492919691	-0.130318726839403	0.567879530183069	-0.229483050388154	0.818493492982492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36575169722698	1.73130600002542
Merged-chr8-18935156-3	6.9262219967737	0	1.39318847553131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55836886-2	4.68226849044636	0	1.3713246723552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106669940-5	19.567058900382	0.0809005974805439	0.701192794105883	0.115375682922845	0.908147352448444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77743761853437	1.99682882465438
Merged-chr15-78862587-6	24.5509388862122	1.07122050193618	0.522648289078055	2.04960108800088	0.0404033741749002	0.510526968101674	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44857983344985	3.80904211283761
Merged-chr10-88333704-4	8.6536790371673	0	1.36326012408168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-66929862-4	7.88861371236622	0	1.3780127933738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73567568-2	4.08768712394895	0	1.43079197177968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193165087-2	3.12278692386403	-0.681892894016909	1.49406163478786	-0.456402117650073	0.648100843232916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr11-53532071-2	5.46432416625117	0	1.35125435940417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47287690-4	9.4938851484408	0	1.40861371092557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110929813-2	2.10789456130508	0	1.49827650497329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71950810-3	10.9908569768831	0	1.35961150664521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-16954963-2	3.43236914216389	0	1.42575450984293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124737653-2	5.0543380810023	0	1.40663066621526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22889622-2	3.25142545675042	0	1.40032829031361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135712013-2	4.15414775025379	0	1.41874486675861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59847802-2	3.0868744590432	0	1.45441619675848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101060987-12	44.9344083385645	-0.60323239287698	0.30991370759982	-1.94645276438018	0.0516003767100878	0.602825032792535	C57BL6J_F1_Control-BALBCJ_F1_Control	5.71244269851567	5.14440432728949
Merged-chr1-62229316-3	9.67273341920228	0	1.35818304941764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148045036-3	6.7806633218571	0	1.36973604258351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128337374-4	7.3416187656383	0	1.35173589315705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60953958-3	6.44325619901971	0	1.36532489537286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64001632-4	7.15797785680554	0	1.35816335202263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155212181-2	5.83311068133477	0	1.39948918985925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144048071-4	10.2036006862928	0	1.38354845095842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32693938-4	9.76834965762882	0	1.35507689646646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86220304-2	9.97800773786128	0	1.38916043549353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90870591-5	16.6708097327358	-1.15005286496465	0.527205984897306	-2.18141086768708	0.0291530405274814	0.416742982202243	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83205911720047	2.66717239342381
Merged-chr11-31821484-3	10.8755285953929	0.390659184377201	0.859946398500981	0.45428317981002	0.649625020823114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	1.55424902326769
Merged-chr18-46370788-3	11.1923817244468	0	1.40766592974988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125394358-6	32.4439299728616	1.63057506452718	0.475026334108995	3.43259930543775	0.000597824905073299	0.0245718267607445	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7990276774604	4.48535939580874
Merged-chr15-103358074-3	4.77795249811281	0	1.40882952362628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118126114-3	4.87105574721016	2.2058810964849	1.23409375636906	1.78745017151293	0.0738647588167259	0.757159046675165	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.815775955292901
Merged-chr4-124645431-6	20.1080364128601	0.988248469308013	0.527821051423879	1.87231726859332	0.061162723083466	0.674887102601789	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36575169722698	3.76302362867685
Merged-chr13-112667319-7	29.8817106264331	0.927975491707746	0.343882783667416	2.69852268209283	0.00696479915086589	0.155866412944388	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78180685029471	5.66931097381829
Merged-chr17-87083896-4	7.39673738034492	0	1.3542561332615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58588890-4	7.65276937782838	0	1.37081688555175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32924828-4	10.2612559704778	0	1.36269751126093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59871184-7	35.3725499754345	0.0616939330657939	0.326556550707509	0.188922662651015	0.850153431188445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85731132856544	4.84428483852997
Merged-chr11-99186248-4	7.30236589772016	0	1.40723963841017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43537153-2	3.82886172297337	0	1.42848442263374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95870237-2	8.40600008973499	3.0479087219325	0.980172855554062	3.10956246611176	0.00187364661498834	0.0592837929826259	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40343015234056	4.7100792092211
Merged-chr14-66812431-4	8.86067308480778	0	1.36021671795721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94184534-2	6.01687713790073	0	1.36414926241591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117285240-4	4.75012046133068	0	1.38303292999419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63826129-3	13.7966590563922	-0.202281105381806	0.666105759971377	-0.303677159901001	0.761373860486771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72248125232878	3.60868416784985
Merged-chr7-19843791-3	5.22109048267045	0	1.37940476076351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74638121-3	8.67853386347541	-0.748838935440956	0.862708152193184	-0.86800957373273	0.385389091626113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76171389311731	0.730937814817307
Merged-chr17-26540059-8	23.2233983810254	-0.704819587115647	0.374364640691963	-1.88270875639559	0.0597398481261965	0.664497320297098	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93072416071829	4.13674853794896
Merged-chr14-33057753-4	7.46837836263597	0	1.3615931484658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44679747-4	10.5389766007152	0	1.37775888426817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97356990-8	33.9536070980808	-0.197416880969881	0.352213614996328	-0.560503264395214	0.575136213674785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28660331444821	4.16664899317065
Merged-chr18-36522263-8	24.5451946801671	-0.678826350151739	0.346647442433305	-1.95826152758172	0.0501993327125295	0.590789707155089	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9579853743264	4.29246516944396
Merged-chr9-89869746-3	6.92813273562516	0	1.4323711641349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67532555-6	14.2398960449603	-0.0427398173658387	0.51351689483282	-0.0832296226198225	0.933668959002769	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33773048058368	3.30334337704014
Merged-chr11-101708635-4	8.88439713246556	0	1.36189248838255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60381403-4	7.06190647498673	0	1.34625729364598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9120234-2	4.58696572196076	0	1.37705011323537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103920368-4	9.03754087038542	0	1.35384565571117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23728396-5	15.1746152526961	0.691602904977744	0.509060832982051	1.35858596884457	0.174277823847486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05607989528133	3.79248418465573
Merged-chr10-121334756-4	9.10003812836519	-0.592530603109133	0.935764886907462	-0.633204570292589	0.526600061583897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.815775955292901
Merged-chr1-86501767-4	11.6696868886063	0	1.36528890646409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78206252-6	19.2500756335091	0	1.33701567044173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6242290-3	6.19523638012073	0	1.35547180651493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93256922-7	23.3939986673889	-1.36836756840654	0.487296579282207	-2.80807956916538	0.00498379110858897	0.122807751981771	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54204522740437	3.13487761574507
Merged-chr4-49620100-2	4.23397048508433	0	1.39724782776716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30265361-7	25.232892904942	0.191002351956123	0.410583226013414	0.465197650207666	0.64178992131236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51936773762769	4.67333829606475
Merged-chr17-87313461-12	56.0970239641329	0.31936499941472	0.294983171409867	1.08265497956484	0.278961593989332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24725302157992	5.68526471853218
Merged-chr1-45826337-4	5.65745818072778	0	1.39654359522748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91056611-4	7.80378653484261	0	1.38871464482304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106794644-4	8.23641164259595	0	1.35937494801203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45117695-4	6.73385025018821	0	1.37039208478461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21441021-7	15.7526577618384	2.87004296428441	0.663408549763194	4.32620738051821	1.51698611371193e-05	0.00124564725310071	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	4.29891195661621
Merged-chr1-127278238-3	8.87068297099494	0	1.35802026523896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55392587-2	3.55138450717581	0	1.37956360045517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36703984-3	4.34226026584375	0	1.38321811305101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170324394-6	20.9919258168525	0	1.33753863093816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6891277-4	6.78646388820117	0	1.37152858573296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103944837-1	2.96687478370759	0	1.46316712048248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89251613-1	3.43861457322675	0	1.39768833089224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55831253-2	3.56216207679456	0	1.40118026372629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50842675-8	34.3705045684225	0.806107574225801	0.378219047707331	2.13132463611291	0.0330624068199296	0.451124214626007	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37947462008674	5.10910226478129
Merged-chr10-59974839-1	2.63550510067393	0	1.60996106325845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115539094-3	5.97613478588651	0	1.35746147812738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-80706812-2	5.37618468903872	0	1.3925620911484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69660838-2	6.79248983561054	-0.587387751870879	0.874397596327067	-0.67176277054994	0.501734733217946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16670355083028	2.51470480589047
Merged-chr2-3622389-3	5.5385692506483	0	1.38303783412063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34027369-2	2.28638622560741	0	1.60980726931134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174084991-1	4.81961323386709	0.816044220874686	0.903677854610544	0.903025582303746	0.366512317715289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65199033198162	2.16975527034349
Merged-chr12-25217425-1	3.34737070482077	0.0689145412961488	1.06998908028907	0.064406770653707	0.948646339020457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.15786140276852
Merged-chr5-123914649-1	4.75719565066807	1.49106750504099	1.04778528144503	1.4230659004721	0.154717052297785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	1.82804996404061
Merged-chr9-62360895-4	4.68129278105493	0	1.37267628992354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37803423-2	4.80999497150526	0	1.38224282352159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51376279-3	6.63835781253726	0	1.35918246776463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91002302-1	4.44423194702475	-3.5629119781691	1.15973427066936	-3.0721796089657	0.00212501819508651	0.0653358959653323	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	0
Merged-chr12-108310012-1	1.22338774118698	0	1.70917466648859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79504476-1	2.7678864717058	0	1.53349803305201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20428441-1	4.84947372167434	-3.53906964836196	1.19909526112615	-2.95144994988819	0.00316285800563259	0.0887150662168122	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53630606335036	0.376242425970964
Merged-chr2-118562545-10	37.3174856541882	-0.578113860781351	0.289366341659601	-1.99786145640055	0.0457316823375219	0.555638918235439	C57BL6J_F1_Control-BALBCJ_F1_Control	5.70492382509888	5.12228996715531
Merged-chr1-165587897-4	7.80239934085086	0	1.38075602517436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165680548-4	16.5680968792422	0	1.36621690316369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13424706-3	7.69778805380187	-0.737242114813576	0.885715067157399	-0.832369395249953	0.405200471375531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76419196995713	1.13341594473881
Merged-chr8-25007996-6	21.0963175693204	-1.03522339766415	0.542213718773956	-1.90925342133536	0.0562294078606842	0.639183266812826	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80500128385901	2.1357670296181
Merged-chr11-45884200-4	9.1627279869762	0	1.34366471883239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67633967-4	7.40407204458304	0	1.38547626239497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29070760-8	31.5150630926861	-0.450339926641537	0.315812690767458	-1.42597159584424	0.153876541172772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11170725307554	4.62735067342251
Merged-chr3-59248113-7	36.3411679976314	0.274298656449365	0.369883752718366	0.741580711327482	0.458341413721762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87882140042297	5.10553492799102
Merged-chr3-65586495-10	51.4993881871785	0.420679955958173	0.365984689802639	1.14944686944426	0.25037176302151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57347540789367	4.43511017679877
Merged-chr5-136035084-4	15.0995316455479	0	1.34638585140931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83603653-2	4.1682128252114	0	1.40656243218501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192932043-4	9.53820302713313	0	1.34906985308158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40543752-2	5.85959049227893	0	1.37625731260536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25101649-2	11.3528916561138	0.41565623166492	0.517658118048132	0.802955111053185	0.422000680468467	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43736044370692	4.85849782341444
Merged-chr14-122633411-2	5.40447037324117	0	1.39645757557643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129366061-2	4.97484381468187	0	1.35973173335336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59199556-4	7.03488753076255	0	1.36666719879077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86016139-1	3.46595252037159	0	1.50486662009459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155481562-3	6.97810195708843	0	1.36198549529191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83958507-4	9.54061228375404	0	1.34654578501872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115675781-4	8.54309550316181	0	1.36369352373642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52453296-4	10.1152303763533	0	1.35374571067822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-9007246-4	13.8727633317127	0	1.34738308006215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27220214-3	5.92664329733364	0	1.36041603019834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40631328-8	28.9704749005208	-0.0104103749663108	0.333568343591859	-0.0312091215077905	0.975102765547813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6275913059136	4.68979307832789
Merged-chr1-152813818-2	6.25431021361102	0	1.36838913195934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21842337-2	4.30058437473061	0	1.37872176246702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131975646-8	53.1420263309744	-0.0386961867013967	0.375828072412713	-0.102962470187439	0.917992757050152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11860226880806	5.08058805210233
Merged-chr6-65510472-4	7.87152654296534	0	1.35811458327614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120830841-4	11.2637218788913	0	1.34757286259091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120711418-4	9.80545580195216	0	1.36128754094684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65309974-2	5.62600034489408	0.0143311946756086	1.3057518213002	0.0109754353329856	0.991243045410796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.841757702988201
Merged-chr17-87746427-3	4.95586497292407	0	1.4043119685599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148900521-1	3.16112393742568	0	1.42292702142645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17247554-7	29.5209550065406	0.512380231092726	0.32506935790715	1.57621817814978	0.114975530589576	0.990276964014969	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66778967098604	5.19098242766479
Merged-chr18-68499085-3	5.65568222277155	0	1.41242799019578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117072338-4	8.05596684574504	0	1.35489748680511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23630383-3	6.14740565928107	0	1.386949688339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73488889-4	5.66539811981232	0	1.37062890307706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148678722-4	18.6603535590322	1.58665914944246	0.46005418985863	3.44885273174021	0.000562973648494131	0.0235043660203475	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31841236551031	4.83917657731009
Merged-chr11-58092879-11	49.5669438577712	-0.10307103090997	0.248013229729474	-0.415586825841497	0.677712368475382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06146515679184	5.94480943252949
Merged-chr3-81981687-6	16.1517849814521	0.625272473870926	1.34256660079562	0.465729203676289	0.641409345908007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr13-49100587-4	9.84468574906489	0	1.37489419746179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99487583-5	10.4092498959549	0	1.34968377362977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7398505-4	21.2005081170451	3.3897593106096	0.769089715588913	4.40749530503599	1.04572866814517e-05	0.000915374632394579	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	4.45062854193694
Merged-chr9-31262446-4	9.80032842676121	0	1.35603551232529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-4016415-4	8.11370389779938	0	1.37384331313595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58618424-3	5.13494794713178	0	1.37647915168184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13833951-6	31.8812404655167	0.440589346166331	0.341254703619979	1.29108651541686	0.196673679387445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26027633947269	5.8043312314927
Merged-chr15-66883829-5	19.8368282419248	-1.72596032908815	0.575573938577342	-2.99867699596379	0.00271154606904233	0.0784861196842768	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10610461670098	2.15506412301072
Merged-chr15-90654417-2	3.09081234455744	0	1.39971104195325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76799638-4	7.77130544939761	0	1.35781510983598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53228668-4	7.34590780115478	0	1.35775237440145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68058174-3	8.94753830169403	1.63235972067655	1.34563793378907	1.21307498821776	0.225101151705873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr6-3386798-8	22.4439501052254	0.372317093126581	0.38150544822363	0.97591553373659	0.329106323636902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35404809613912	4.72932593413595
Merged-chr3-106474386-4	8.47663985042014	0	1.34923262832512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56777209-3	6.5924375404759	0	1.36246300695614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122641579-2	6.28379567032976	0	1.36156957594371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181852606-3	8.99283458601576	0	1.35444132455693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7869288-4	9.97746184514723	0	1.35625666983177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8873827-2	7.30991366143558	0	1.35820020058823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36920660-4	8.10889970621662	0	1.43298555742135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163822507-4	7.79427970256506	0	1.36393563424312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37880237-3	5.60901818843371	0	1.43931401214901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136946443-8	25.6693237299701	0.160760395406952	0.355216274445603	0.452570467549258	0.650858068436607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70966243570768	4.89821149285151
Merged-chr18-70504335-8	29.2198057733644	0.215348893502948	0.32335592386413	0.66598097517284	0.505423260765491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89236553689763	5.13117448743016
Merged-chr10-98878470-4	10.8363133871631	0	1.35142701225407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72636266-4	7.42367003847285	0	1.35589717206584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143710528-4	10.4243864322536	0	1.35572965340122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176223443-4	9.22152026757956	0	1.35961077140969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131275382-5	12.578265349849	-2.45172984838288	1.09418433030124	-2.24069179249522	0.0250460461189728	0.375062815697312	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74976283603542	0.413263464506793
Merged-chr2-163743510-4	11.4425889086934	0	1.3593272010598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57231681-4	10.287065881001	0	1.41087070311309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79542792-8	69.0248839283101	0.650224561795163	0.384781904318706	1.68985223706518	0.0910562272308301	0.857123430292505	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07683016080309	4.32860180098816
Merged-chr11-118216159-4	14.286707237099	0	1.34493793195224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71353849-4	12.9984068195271	0	1.35767090835516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62549932-4	10.0516303904362	0	1.351294235146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121305630-3	6.35266971543398	0	1.40633706020284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132463595-3	7.63071495934377	0	1.35279088215361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71250245-1	5.34040988068431	-0.254704167554142	0.942950717868054	-0.270113975977462	0.78707257034765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.31037834433945
Merged-chr15-98699606-3	6.28747620923403	0	1.36846168308029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40955385-3	6.94421746317509	0	1.35745530650792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106557165-3	8.93379244132574	-4.05980653879661	1.08468266222152	-3.7428518775084	0.000181943488990066	0.00960220011457378	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56744335633305	0.376242425970964
Merged-chr9-69706083-3	6.73691133979568	0	1.36482377277387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163712900-1	4.05731401140807	0	1.38094582786695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110097321-3	9.63517643569973	0	1.37979939993924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44596159-4	8.71756991526393	0	1.37061327196222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140768570-4	7.73134995797786	0	1.39533372138236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13666084-3	7.37832170284126	0	1.38216067601709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37428788-3	8.47246063218007	0	1.35388421209775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41128483-3	5.57341214211103	-1.87975727297368	1.28538352522272	-1.46240965135132	0.143628986238138	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr3-148982530-4	11.2720335577462	0.0378096999851877	0.730787801636364	0.0517382746407713	0.958737239312657	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26927213904674	1.95720824132453
Merged-chr12-76957375-4	9.5375845161761	0	1.35679666849451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13660166-8	42.233065633411	0.0408985564254354	0.343215871031028	0.119162777358096	0.90514639584061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34139202193762	4.43540052849551
Merged-chr2-116977989-4	7.57643297985617	0	1.37642554969553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-54578566-1	3.66351435122199	0	1.40076125433686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-14657020-10	51.0996765006853	0.5796157871492	0.254944309661161	2.27349960436281	0.0229960899402471	0.354521966268262	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27270680832465	5.83581512002488
Merged-chr15-74924176-4	20.6979730486375	-1.0439147875217	0.553677231255994	-1.88542119594411	0.0593729945758254	0.661841029680644	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2584470009376	4.04188520319885
Merged-chr14-46981317-8	50.4284062208305	0.215755448655188	0.347115262536749	0.621567162096037	0.534226519200198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05084621745947	4.2193581147849
Merged-chr12-76306360-4	7.47450789951693	0	1.36028555443414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110452702-3	6.19130973630411	0	1.35759940505715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60916353-5	14.5005145968949	0.485498826536464	0.650038501081761	0.74687703225043	0.455137791118067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	2.30224893683818
Merged-chr5-137886152-4	7.03924515202174	0	1.35678882040083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100006929-4	9.96539257148747	0	1.36269358773026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149132520-3	6.29537944791212	0	1.37485574775709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44601170-3	4.41384098551096	0	1.37989334963947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53488864-8	47.9244459036887	0.298021757756862	0.366397016107062	0.813384783870017	0.415997480576887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09340650258232	4.44405558207259
Merged-chr9-123931133-4	8.70973258083434	0	1.34997038639702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128983488-2	4.80835183413414	0	1.41520148531842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3110042-2	6.68804591238283	0	1.44133290553919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38459922-4	5.45757297500523	0	1.38527313610369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74476177-4	12.1351373110821	0	1.3869196687676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111059534-5	20.9722444798531	1.08272748350376	0.479349372152356	2.2587439275077	0.0238993182829921	0.363495185980616	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38844057575597	5.41743917528884
Merged-chr18-64972390-5	19.4495794448932	1.75431203177256	1.05516162902868	1.6626002912819	0.0963924727774785	0.889307268790046	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.49792997957569
Merged-chr7-89269911-3	7.50407035482073	0	1.36369776360506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40108145-4	8.51602945904402	0	1.37640079087752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10293115-2	4.44311343935678	0	1.45440195725196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17704457-4	9.27640650689602	0	1.34759665888962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100666472-1	5.87871606541307	-1.34279730488828	0.967346267592741	-1.38812475932724	0.165099058395785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53247394686427	1.39949824061849
Merged-chr6-143327034-1	2.73815100288495	0	1.55902747197376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31435739-1	3.96202675861489	0	1.47156120767773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119834175-1	1.14374142104009	0	1.79267441706761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98959510-1	3.52021417453189	0	1.41544690563614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64287726-1	3.42043380360589	0	1.42011807321708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51525738-2	2.9088142974177	0	1.45035181007041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124027542-3	6.65923632419615	0	1.35612672615175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122617212-2	6.04491677266741	0	1.41909484646622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172397568-1	3.83669501841448	0.23393082397002	1.08600118309097	0.215405680594387	0.829451041485493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21444166002597	1.45526469271556
Merged-chr4-48322349-1	2.6195004726318	0	1.44466287662003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76472247-1	2.55592209431424	0	1.44718754007374	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62997970-1	2.20240137521725	0	1.40585864349632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5630411-1	2.57374058839968	0	1.43006474986407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97727382-1	2.5565615376904	0	1.49050641122184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24359541-2	4.59770616018587	0	1.44668626500445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24336623-1	5.77210464141194	-0.30278188600701	0.733950682988763	-0.41253709959644	0.679945793968939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53270363442897	2.33708062673737
Merged-chr6-15671580-2	3.68758612796823	0	1.43092617041119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129626067-2	4.49643514825588	0	1.48632544502621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79941215-2	4.4661479425704	0	1.37799088309135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139197159-3	10.7580982574522	0	1.35412283123509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79492047-1	3.13343017763733	0	1.43515286581192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93998217-2	2.86060944312941	0	1.47433202026414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16836421-1	5.42962018952343	-0.627097250612001	1.34609093673909	-0.465865443036966	0.641311818015192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.413263464506793
Merged-chr5-16832331-1	2.992622328664	0	1.48819800371972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118481510-9	34.214989980187	1.45158878160907	0.440296387562721	3.29684463150925	0.000977775739697633	0.0352459624895382	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49156196783829	4.64492155359855
Merged-chr10-81299673-4	7.25333778710697	0	1.35482532807176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72462070-3	7.59206341979487	0	1.35974241029909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156437953-7	33.3008536064338	-1.14807630069001	0.394958157361115	-2.90683020287717	0.00365111324185952	0.0986926229310002	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87331687108683	3.55838627872081
Merged-chr13-104610556-7	20.4916677794253	-0.876377759581707	0.625763249549182	-1.40049413290581	0.161365399108388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95337926806373	2.10228980298813
Merged-chr8-14652947-6	25.690102355886	1.00046890993141	0.521763063807237	1.91747745160632	0.0551773028924918	0.631449054301677	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13024311431347	4.07161711133383
Merged-chr5-130159905-4	7.26546424707237	0	1.35051977075811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135254947-3	4.73258515700145	0	1.39749783462879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27461252-3	5.72094491674705	0	1.3768783691759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101513580-3	10.1594642024821	0.747790741414499	1.01512641324905	0.736647900847237	0.461336497222955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	1.04648494364547
Merged-chr1-157019969-8	43.4947210110803	-0.749337935424695	0.290179440979267	-2.58232607002036	0.00981368149613868	0.198756301210359	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49948671416846	4.79697593687806
Merged-chr13-81401956-4	13.5647711722486	0	1.35735496125911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173934669-6	24.5186723494422	-1.4516407632259	0.417171251755506	-3.47972387147298	0.000501930817705943	0.0214500450626394	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74917885286258	2.80362606945152
Merged-chr12-104131374-8	35.822096969194	-1.56550994639948	0.394332286648589	-3.97002730794547	7.18643947956325e-05	0.00443413920169783	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33182829384105	3.29007614423177
Merged-chr13-24776374-3	7.4709893230512	0	1.35990964672515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60486189-3	10.0210267463599	0	1.35907233784473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39775422-1	4.92662131195018	2.79320636648585	1.27943352019036	2.18315865764582	0.0290241281251966	0.415408789035693	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.33245162145219
Merged-chr7-80053431-2	9.69825371050193	-0.793358084560794	0.754221348668112	-1.05189025206167	0.292849904767609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02164517182551	1.97311307185425
Merged-chr11-4973401-3	9.16665156796911	1.98069955877812	0.91094592998338	2.17433273873264	0.0296801554242766	0.42026141409436	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11145969726662	2.1879172296771
Merged-chr7-126755047-4	7.08069630058199	0	1.36190186446219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44536681-3	3.66162208074254	0	1.4156235541559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40305647-3	13.0375340158039	-0.884795516096332	0.639878386585109	-1.38275574647597	0.166739772324598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33607286535922	2.3873276010566
Merged-chr18-65507019-6	23.6748139468295	-0.964584380209948	0.373004179358737	-2.58598812986023	0.00971002744454525	0.197024032048539	C57BL6J_F1_Control-BALBCJ_F1_Control	5.816369551862	4.9085345867849
Merged-chr2-120571325-6	20.360474668881	-0.368633498182655	0.464344907842037	-0.793878627625777	0.427266092937284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23044393868147	3.87549418194467
Merged-chr4-101657325-7	40.7408555558585	-0.953603061672589	0.305107131300189	-3.1254695936109	0.00177521421387121	0.0566640454796389	C57BL6J_F1_Control-BALBCJ_F1_Control	6.72338287561628	5.73778214786266
Merged-chr2-27768049-4	15.4008699132476	0	1.34995842520554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24547440-4	7.00937292249035	0	1.34842467559234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-98929508-2	3.86910129039614	0	1.46517417550691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135661517-1	3.3294430710133	0	1.38910215696962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113705004-2	4.29623339835126	0	1.37460729682388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4654724-4	6.64694226237178	0	1.37855725538652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24301105-8	31.3633197402516	-0.399289335612242	0.353100983041268	-1.13080777111735	0.258136008405039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44895091132787	5.1366384068431
Merged-chr7-123399071-2	3.56898300986362	0	1.41931125559207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3487560-4	21.6808758727744	0	1.34852141405724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-76269130-5	22.6132819706715	-1.74713139125336	0.518409205142474	-3.37017817955837	0.000751195935508238	0.028817402864003	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01505074880619	2.64759622307641
Merged-chr4-141977544-4	6.88803813429128	0	1.36459148032818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119047445-1	3.39386568968767	0	1.44936477711719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6591672-3	5.92989098738529	0	1.37114692540331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80509684-5	17.5338848234595	0	1.33858190689071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-103807028-1	6.46186817508261	1.13450167291684	0.6888289526434	1.64700056314874	0.0995579300821433	0.908641625476029	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2758534078984	3.66645555412909
Merged-chr14-27186044-2	5.81025037472915	0	1.36656245157894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37279400-2	6.80766175706933	0	1.43931976459713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82805168-2	5.81714704022467	0	1.37349266501842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41087988-7	45.5094326621565	1.26463836987453	0.35350972462228	3.57737929621533	0.000347056394276883	0.0163338861787854	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73739266797416	5.15762497915362
Merged-chr12-55465758-4	7.64934056075876	0	1.36115057850782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130496373-5	17.3687517355471	-1.64685221786175	0.544400825534999	-3.02507296208329	0.00248573154243638	0.0736359024061576	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09168683618623	2.29732980722362
Merged-chr10-13961672-7	24.9459978013631	0.758551285473884	0.313441206993438	2.42007518012705	0.0155172985976752	0.273332739621201	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63925073514756	5.46702740257915
Merged-chr15-97939708-3	7.09235188270944	0	1.38940358479501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121290195-4	15.9349752563381	-0.641180992872972	0.443060878550099	-1.447162283818	0.147851477174193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31923031864703	3.67964392538846
Merged-chr1-64933167-4	10.8492220249695	0	1.36625029084347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136570742-4	7.92184441381132	0	1.37012980421986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85844295-4	6.1722753495528	0	1.35757261897262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75297652-4	6.70713160037203	0	1.36936145040739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3986316-2	4.6591304813232	0	1.48260870860681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68091968-8	26.1916999591666	-0.942926255610405	0.397630595028039	-2.3713624338789	0.0177226427351428	0.296608724273285	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67617390589508	3.74609881312458
Merged-chr17-46388398-4	10.4743041118705	0	1.35496239384818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44759276-9	51.1257761743756	-0.266459004915949	0.28704110502992	-0.928295635178014	0.353254237597115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63500116629857	5.22959386709245
Merged-chr10-49049405-6	25.9946192727974	-1.61936497349906	0.819728166763104	-1.97549021634027	0.048212543802544	0.575996850233514	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18069501644732	0.662147012823607
Merged-chr10-68193028-4	9.14476971994225	0	1.36815193925415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132384483-2	4.31953440159317	0	1.41260097146601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129051408-2	5.33027717802833	0	1.38848997533508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52783196-3	7.74830901990723	0	1.40736564228072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118477834-4	11.861071691357	0	1.39494052886441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14668659-4	8.26402661675654	0	1.36510830814539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-21993396-2	3.14832911477635	0	1.47761435087464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76225909-3	10.1079391511392	0	1.35082248284037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80639965-7	41.6487903479079	-0.341078327673304	0.369668255827575	-0.922660580930147	0.35618411437747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25875491385395	3.92049960054201
Merged-chr8-126747634-4	13.1618235100745	0	1.35425038636147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55469382-4	16.1170187931977	-5.62235977124832	1.00188584534634	-5.61177682803245	2.00259603947844e-08	4.235763350584e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43820708839273	0
Merged-chr17-51209748-3	7.50636528636882	0	1.35973458452215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32730823-2	4.85358712405267	-2.97572804089012	1.27846944794325	-2.32757071017798	0.0199349102366911	0.319564077132495	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	0
Merged-chr8-35781082-2	7.81176409468248	-1.90153124911101	1.00926922643848	-1.88406740173893	0.0595558589508338	0.663129237342969	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92073949962037	0.577068348605183
Merged-chr10-119066170-2	4.43099737445859	0	1.40252064552162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32953524-4	8.31523793303807	0	1.3579969005774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126820768-1	3.18552967894447	0	1.42257695884566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33068244-1	2.69423333312288	0	1.40211849486085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34392399-8	27.0054827291647	-0.365039785832279	0.30177183997622	-1.2096549030587	0.226411341241552	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.30567515368146	4.94952669334014
Merged-chr7-35683981-5	12.3725061870537	-2.55665823499377	0.798640143732735	-3.20126436800973	0.00136825932734558	0.0461397076769095	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59092488806883	0.887876939341704
Merged-chr6-29998944-6	22.1086485414917	0.259713828579361	0.442258894599673	0.587243878530585	0.5570399269168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79550874567568	3.97452998987081
Merged-chr4-155162944-4	13.7379177653393	0	1.3576043075916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73401319-3	7.01042424033742	0	1.37466902192164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73918864-3	8.14559465576147	0	1.3883029100047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22641927-3	12.8453838411867	0	1.34486495101749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112116238-4	7.38179896969835	0	1.35755587847973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5529524-6	21.857156425908	0.494361302855344	0.473382814271559	1.04431611784654	0.296339158173518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00993615579623	3.51055904872825
Merged-chr11-78159279-3	7.30940128585804	0	1.37715386593132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110907760-3	6.49715948487771	0	1.38845929992901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-37043366-4	8.0117243745326	0	1.36219905700487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134362404-2	7.69240990078664	-2.2424490517523	0.817469062296863	-2.7431607569975	0.00608508874444268	0.141710872168079	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21058250868588	1.86404794779727
Merged-chr18-38404448-4	8.10115491463722	0	1.34499036084684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58932379-4	7.63465534247538	0	1.37213847616405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73123969-2	3.93335841884381	0	1.4108690854419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28444138-2	5.51973828115404	0	1.37899615005587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-49109297-2	3.33899034520293	0	1.40599927938662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167467429-3	6.19293387397257	0	1.38261773183828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75792908-3	14.3535614991792	0	1.34656479070131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14336036-1	2.73021814112554	0	1.43912321729581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77822049-1	2.33961108424605	0	1.42967524954026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51842997-2	4.5191165542241	0	1.36772625960274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83565469-1	5.24463125211452	-1.9529715653881	1.01025995613808	-1.93313765781009	0.0532192421349723	0.615651156249193	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75359042990469	1.84118771391785
Merged-chr2-117172593-2	4.59683843425265	-1.75478909643425	1.32888943083637	-1.32049292869296	0.18667049540844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr10-63164779-1	3.07486030518935	0	1.47188850757793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140568454-2	4.27255392051409	0	1.39804423041885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11261674-3	9.88769556138719	3.28464796870419	0.997880605332163	3.29162421952357	0.000996106145707376	0.0358117288191186	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	3.37195796200454
Merged-chr15-62108295-3	6.40589619159204	0	1.4267109432646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141370107-4	6.22614789732754	0	1.38950685999876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114294365-4	7.70254168617836	0	1.39977969547781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155541231-4	11.0868311886306	0	1.36520394200149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40576199-5	52.2438217458169	1.50115427438918	0.509037954072549	2.94900264779712	0.00318801244690119	0.0893167801728468	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66981350822531	4.84911371710429
Merged-chr11-63827636-5	13.9572325690726	0.251225242770242	0.962165595952915	0.261103955313879	0.794012341558071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.37212355142653
Merged-chr1-64299087-4	6.45099219202454	0	1.38254528582058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70731267-4	5.70102288441279	0	1.37241531955641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95671301-2	4.60786762457475	0	1.41113396676517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64041441-2	4.43101232499071	0	1.39572791660649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67960111-3	11.4682817393453	4.3464232988991	0.849611696868691	5.1157762009612	3.12453358336803e-07	4.59426506445859e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	4.91091795196596
Merged-chr12-17271478-6	17.7783857868912	-2.55352389448373	0.629568975427986	-4.0559874996188	4.99229294614532e-05	0.00330577996453502	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47690088621949	1.79276062464305
Merged-chr18-5820481-3	7.69515957021162	1.72031347621647	1.24099509234356	1.38623713085581	0.16567450695549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr6-97407565-3	7.196028348505	0	1.37503914088312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20028431-3	4.4497522800221	0	1.38098847568862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135551810-8	27.2179898989428	-0.959656372584553	0.330458494269873	-2.90401484369422	0.00368410692799983	0.0991407764847243	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61295577822098	4.65730730219178
Merged-chr2-91476822-4	9.94428371410176	0	1.37595588150263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51107010-4	7.67694453757979	0	1.35620910388867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32737252-4	6.97927894440894	0	1.3594811269593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104092960-7	18.9875100586921	-1.41438005602166	0.539707464438737	-2.62064201297	0.00877643678760992	0.184390231031534	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29103066414375	2.95624897035666
Merged-chr3-37654183-4	10.7906710419635	0	1.35105975462281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37963086-8	27.9868326329183	0.957837820219502	0.343001598685674	2.79251707248532	0.0052299707659737	0.127544181636413	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39935457395866	5.26285543361539
Merged-chr6-51858052-3	6.28379172217408	0	1.36414726332467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76778449-2	4.80473519535859	0	1.36066279507232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89571534-2	5.23157363382992	0	1.36642633956377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60305447-6	17.7297096637896	-6.14183532677542	0.993523186590607	-6.18187417230982	6.33450085134252e-10	1.87139745531591e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93801798785211	0
Merged-chr3-103212432-6	21.4073537563312	0.552954782018834	0.513392084608712	1.07706137004484	0.281452849523598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15282907313963	3.53869831736552
Merged-chr13-52591965-1	6.68080868817244	-4.52199387888469	1.19412652387499	-3.78686327493224	0.000152560990511852	0.00831534696649707	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19968205137681	0
Merged-chr3-83863001-8	93.6038302350295	-0.445281231706099	0.398101511852956	-1.11851178266957	0.263348477070492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37699142442326	3.80414683408642
Merged-chr11-70466389-4	9.65019715783541	0	1.35402642300708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128717595-3	5.42062469405839	-0.669442595664102	1.4337268907028	-0.466924767893521	0.640553704242733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.413263464506793
Merged-chr5-149247748-3	9.66668463038179	0	1.37920816989529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142222686-2	5.75993987321326	0.393662621943361	0.973843502590052	0.404236020362994	0.686039168255565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.93960303562856
Merged-chr10-122807276-4	7.26161558695403	0	1.35420780672158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31194070-4	6.73305877744135	0	1.35767849429644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78808086-3	5.50041935647049	0	1.36650746650138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13439072-4	14.1536953429027	0	1.36475676912694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77733945-2	5.3745714292008	0	1.36525712310485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47715251-6	17.5911642735199	1.57097169678792	0.5120995440683	3.06770766540342	0.00215707524399623	0.0660868182509597	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22173656189578	4.3711891493676
Merged-chr12-34297298-6	21.4747716238746	-0.106655990482815	0.641567859867324	-0.166242726848678	0.867965936076902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36818926292598	2.52914622042589
Merged-chr12-99381096-4	13.0489034538654	0	1.38779414734403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146207772-1	1.18063671214792	0	1.60398399196042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107322922-4	6.51935464863997	0	1.37936366191497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36816821-1	1.5284295440386	0	1.52280669590133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109059624-1	7.04418465590757	-0.892329922599465	0.804030145670765	-1.10982147548092	0.267075963237238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2899778460724	2.91251139439735
Merged-chr6-97924347-3	11.309673061788	-0.0378345645884247	1.37093447666905	-0.0275976461547243	0.977983059048173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr4-108623882-1	4.21041785025511	-1.06455407350982	1.05835140387082	-1.00586069014158	0.314482588071089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17930017423938	1.38572824442771
Merged-chr13-9061564-3	5.28350179910319	0	1.44049652211337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62723910-2	3.26285170245741	0	1.49148250167504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88596241-4	8.81128662105109	0	1.34943487586025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18939035-2	5.78879611467439	0	1.3660284404899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16538072-2	4.59289096268726	0	1.38912101663588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58740776-1	1.23272678827801	0	1.82239208000849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30869447-1	3.419268377944	0	1.38517104330977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143090516-1	6.41358303957749	-1.2868812907239	0.814644827181847	-1.57968386686464	0.114179282081284	0.987066093297792	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45921210932902	3.33322465021625
Merged-chr18-18115560-1	1.22031044545757	0	1.84579813939932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69095933-3	10.2836293546821	0	1.35936257859117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148818420-1	3.47134347750594	-0.29159926071914	1.07231412769085	-0.27193455088303	0.78567234417271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13691092425662	1.56277881816808
Merged-chr15-77343615-1	3.90911909236208	0	1.40130957626704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44494686-1	2.32953487269033	0	1.48239531728679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-146947200-1	3.1961942688895	0	1.40517017463939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101646271-2	4.05907916699219	0	1.40517972557775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35039122-2	8.67184445842359	1.10210164301342	0.754262262686737	1.46116503175919	0.143970156897177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	1.99434946146181
Merged-chr6-116693769-4	8.12868769456806	0	1.34480658009422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19963875-3	9.37325426393647	0	1.36292427438105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98677018-3	6.00035771112766	0	1.37605859109755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81404906-3	7.13292126474211	0	1.36647037210491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119418264-5	19.4769523285651	1.80251265185182	0.450244373027866	4.00340961449452	6.24360616228774e-05	0.00396490873102569	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72400794361709	5.06022271585159
Merged-chr1-72237472-3	5.88445242344584	0	1.37518260686894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117404701-4	9.47784430822008	0	1.3525696894567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119926620-4	8.88762664932922	0	1.37093634099566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36685547-4	9.24952193231327	1.08576303505028	0.642221690794214	1.69063588261485	0.0909063670072182	0.856574658371533	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26360001117397	3.20933137064535
Merged-chr14-8102762-3	9.75816680064229	0	1.36452292691422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61931358-4	5.89868904623011	0	1.37822326930907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82818281-4	9.0754958660344	0.26467826837468	0.848735573684043	0.311850093929504	0.755154451591199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	2.11838076800756
Merged-chr14-49019941-4	9.09185337666624	0	1.34975286068068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29810534-4	6.53914379403993	0	1.36041682256757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38422014-2	4.79735107220897	0	1.35784949626853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70932143-2	6.23189436459653	-0.588101397481574	0.983691554019224	-0.597851425153215	0.549939073767933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	1.07599819202159
Merged-chr13-112673348-2	4.64317032577986	0	1.41504816752138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193145329-3	5.95446669885569	0	1.36793133568974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124696015-3	6.3781653884017	0	1.35668156558279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65863483-6	15.1644952579871	-0.167333969520347	0.646796764774183	-0.2587118220648	0.795857597353524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58382759840956	2.47565436424304
Merged-chr13-23879836-4	8.07716608421103	0	1.3576596259739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52578124-4	7.29650446445742	0	1.35997482203318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64621446-4	7.51996032336669	0	1.35088595934547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135295712-5	25.7345411619175	-2.87981612242941	0.622616584707955	-4.625344382338	3.73976502048007e-06	0.00039473764417141	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36571104183501	1.30064958020929
Merged-chr17-46524258-3	7.53893903099515	0	1.3686469020203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77421321-3	6.66163310283185	0	1.3573568582395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57743883-3	6.98645720428315	0	1.37529464872967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127219836-4	10.7853735730344	-0.662782271221963	1.3478153667657	-0.491745596292181	0.6228992004579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.376242425970964
Merged-chr12-81910664-3	6.08911885431397	0	1.37154439373007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46251770-4	8.30547728254089	0	1.35396431833439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102757323-4	12.6898810713306	0	1.35409289422137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130804042-4	12.2245811344865	0	1.36800502538801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167570085-4	9.63035164064397	0	1.38359463293196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16986848-3	9.31637705788337	0	1.35594399912652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117415744-3	7.83276122516426	0	1.39783265818291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96837541-5	20.5070565420362	0.559009736736304	0.460105978100052	1.21495864723311	0.224381863766492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44906518061842	4.00619551135185
Merged-chr4-70515685-4	7.23950892559022	0	1.36598507902291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157297387-1	3.70911411351498	0	1.41975599498695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149782583-3	12.3970916082914	0	1.35514721650413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16049642-5	22.6260539767987	0	1.33915205701323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128344705-3	4.47052219120461	0	1.40255251457538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77253032-1	3.00084547964004	0	1.39664151867836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34765916-3	5.96312522834021	0	1.40766910271622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67380894-3	8.57825516915421	0	1.36706320166377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-37305531-4	10.1842368215243	0	1.35193169792954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58264795-3	8.12668414709417	0	1.34584075304366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-71126819-2	3.84625168386404	0	1.39610814053057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-71011170-8	30.6717740293908	0.522361450909472	0.451809321656934	1.15615465611422	0.247617903181287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39790278147358	3.99590744559169
Merged-chr15-97925010-3	6.01216904085289	0	1.37824130826443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10990111-4	7.48879370265041	0	1.35397189893474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14851465-4	8.45028042625327	0	1.36567182557428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-105716867-4	9.06408101850523	-3.10051114905596	1.18404656231209	-2.61857197828571	0.00882986612209596	0.1847061916165	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	0
Merged-chr7-88327677-7	20.4949155030783	0.100792247052126	0.441254366252382	0.228422095645567	0.819318113618008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59994362807678	4.9091541250646
Merged-chr2-71103480-1	3.76853338381439	0	1.45114175708651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99963094-8	23.6100340405405	-0.0645558448058138	0.357718408256897	-0.18046553746111	0.856787107303714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39625931237697	4.52008707929427
Merged-chr12-80324826-4	11.772690406792	0	1.36582285361538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152115583-4	11.4358917963493	0	1.36538989600804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77191903-9	36.3815867934814	0.255266154691868	0.348316549977985	0.732856807142818	0.463645769434094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31540314844811	5.6528896615219
Merged-chr3-27268955-3	6.92065460117204	0	1.35748558246401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121158591-3	7.53028459191032	0	1.37100129792155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34199625-6	39.3601101543965	1.95191998764365	0.307924298927185	6.33896056415223	2.31320432425588e-10	7.64569978142031e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19947025867557	6.0852606041535
Merged-chr11-114747967-4	8.51085285642674	0	1.37368612551833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30775226-4	8.14556233864163	0	1.35454138045904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47979141-4	8.70424616357462	0	1.34538190586274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108904069-4	8.76113143707917	0	1.36711511107853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80885497-4	9.15834969251737	0	1.35818279361416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-42965514-2	2.68416055749937	0	1.44782814189245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130891964-2	2.42345241544465	0	1.5163283082388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3948390-3	5.39266723506962	0	1.37253430043258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166826989-4	9.17480810743519	0	1.34570856960204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119039964-4	10.4996155509673	0	1.34587229216375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13276594-2	4.07004083330176	0	1.40994676737833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52414139-2	2.78094312060458	0	1.47106046492869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8246423-2	8.91528358876992	0	1.44408893672115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22744883-3	5.843869738287	0	1.36911027338285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25727048-2	2.4465386409985	0	1.66218785570817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143021541-4	12.1995299754219	0.795732336327598	0.902397068708974	0.881798449839849	0.377885810095785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	1.1851593103483
Merged-chr5-117164734-5	19.056371759342	-1.16363294177971	0.448299528614994	-2.59565952561833	0.00944095658213134	0.193005249660804	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45137319945404	3.0423474530264
Merged-chr8-104121482-2	4.2194364715258	0	1.45067406480151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84708787-2	4.77293213688433	0	1.41910396487345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170936539-3	4.16434980839561	0	1.47206390963995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100734779-3	6.87207904194515	0	1.40187496960953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67378026-3	5.25024558627283	0	1.36606983695323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35749975-7	28.7637025392352	1.14685148481894	0.437846598186909	2.61929974919977	0.00881104871091964	0.184651871818612	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5409318396774	4.95784735210294
Merged-chr11-8589763-8	60.6584246101418	-0.1245711484586	0.346320481265375	-0.359699051016115	0.719072201786031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77047480257198	4.65604364913406
Merged-chr7-4087738-4	6.56906112094643	0	1.3582742064693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8245886-4	9.21874748545644	0	1.38563011549991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49720014-4	6.77481269354438	0	1.37901651711867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51639068-3	9.77544112348467	0	1.36601204392823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67109016-6	16.5065335403998	0.22561156300279	0.516832033514252	0.436527824076077	0.662453816276928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81767434410619	3.97934408181228
Merged-chr1-171712764-3	7.21008406476415	1.02199813408122	1.08957347516883	0.937980005362057	0.348254685583492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.838451940269823
Merged-chr6-30354927-3	7.00039761724205	0	1.36890344465534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145277141-5	21.1145382252344	-0.103253057351338	0.359354944578119	-0.28732889002698	0.773860503805304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96521620116692	4.91733572953176
Merged-chr1-156593537-6	14.9485164693873	3.88955995617281	1.07351020353383	3.62321656875638	0.000290962006037502	0.0142618608531944	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.89948922819089
Merged-chr12-118930735-4	7.0586474382301	0	1.35423183359148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109799515-4	9.01961409072636	0	1.34956630765698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46179222-4	13.4757855108502	-4.14998159859337	0.771383401549669	-5.3799207893977	7.45186195002879e-08	1.34131047596561e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11779389860696	1.13743241080208
Merged-chr7-115131429-6	21.3331556510644	0.409475047856302	0.394044539213689	1.03915930080748	0.29873065522334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97365286732077	4.34997529071483
Merged-chr1-172321594-6	19.7872448993338	-0.232440303104817	0.407415486182327	-0.570523976108248	0.56832236509887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33442412063071	4.0557937732109
Merged-chr3-15276021-9	47.580558912876	0.208114750988422	0.267542716871665	0.777874850871947	0.436642795699688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18897948593893	5.40608609497163
Merged-chr2-143837381-4	5.91209766240562	0	1.3848021237246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105685947-2	7.70276192332328	0.460542475209774	0.644988826321369	0.714031710962239	0.47520757098179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11197723984608	2.93415672330046
Merged-chr5-90999817-2	6.04886685992468	0	1.3699240720315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29707971-3	5.29247786885251	2.03007498232982	1.17729001899329	1.72436268852916	0.0846423888475228	0.821034192605726	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.30064958020929
Merged-chr2-150869608-1	2.78535263979951	0	1.45549728211164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116166407-4	9.9060145515173	-0.399581694739976	1.06723737222976	-0.374407517144134	0.7081011511188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.724326877898254
Merged-chr10-111439678-3	4.4535251526342	0	1.39644081653547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73040176-4	10.0115136931599	0	1.35686286757047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60660876-11	45.2447326802919	-0.429700558116033	0.323294456988533	-1.32913060780152	0.183804883782988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.56884370457889	5.14089874223464
Merged-chr7-84779331-6	16.3195549203159	-0.610528625269439	0.583908144639738	-1.04559018550105	0.295750282519459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70530474452499	2.6695764126555
Merged-chr16-91366781-4	5.76121257684859	0	1.39031225970693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16042237-4	9.22212313275488	0	1.36177959820941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88162236-6	15.3499694157663	-1.53067170907534	0.430750693660558	-3.55349795508757	0.000380144152699071	0.017467672017387	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78885359062842	3.40836557379513
Merged-chr19-42017034-2	3.81860934591214	-1.1261360658377	1.29482751915777	-0.869718977374068	0.384453998715712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.41385117919798
Merged-chr5-121871089-5	14.5183527404889	0.0456917989847328	0.504444105898218	0.0905785169268131	0.927827502757015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12137783325817	3.84842480230557
Merged-chr13-107025822-4	7.14371630475477	0	1.36687310841378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14494368-4	14.818077518424	0	1.35765737911512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124021325-4	6.21201444184911	0	1.37709133077338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102495683-4	6.50693806181564	0	1.36077385226283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101133219-8	36.9657271068759	0.397475641800818	0.262816361030016	1.51237023541096	0.130439702510186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51539593005965	5.8458580556273
Merged-chr2-83705970-3	6.37652581327651	0	1.36800451996382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-121004837-5	17.7866301053995	0.780160590272334	0.525298802701959	1.48517488762482	0.137497502435393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52069715892747	5.25588933673459
Merged-chr8-90909318-8	33.0689145822195	0.350600601589675	0.305408287938928	1.14797343567763	0.250979530286257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6051330771164	4.96372163436431
Merged-chr8-115571950-4	6.48017322988381	0	1.37817951569644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-34120990-4	6.68144837239119	0	1.35600809483287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75315186-4	7.20518587908019	0	1.37041762836367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51557395-3	6.13960929413525	0	1.40224481593666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100323777-2	5.87811870715927	0	1.37651220892959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33102234-1	4.48423040214951	0	1.37916497029237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-101759908-2	4.76704924460701	0	1.39361512425883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83562452-3	9.39603232782487	-2.22498528888833	0.911617725042244	-2.4406998983979	0.0146588306294922	0.263070113631089	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92309980705253	0.724326877898254
Merged-chr4-120819518-2	5.35009382251666	0	1.38461283662926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61706634-2	4.45966296416733	0	1.3837404868515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31948957-3	8.70524596020405	-0.0570944327819439	0.811345203845279	-0.0703700872468972	0.943899099128107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8405601103675	1.79065725465852
Merged-chr8-56277352-4	10.5004891912202	0	1.36476510140353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106692375-3	11.0730337153818	-2.97823978340038	0.570731862960871	-5.21828195809801	1.80590407074455e-07	2.86201572541116e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32060686286852	2.1538399771309
Merged-chr5-146805234-7	26.9433229731118	-0.96424527430806	0.434898857563	-2.21717132050267	0.0266113865986213	0.392559216323983	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77634977851126	3.72593363602767
Merged-chr6-115717860-4	7.28568851206296	0	1.35982165340135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58511614-3	21.1412778844771	0	1.34744167890334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81264683-3	12.4289052560745	0	1.3733454946224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117584688-4	7.06367852935262	0	1.34972648468007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52674933-2	5.9681260898529	0	1.39280947775282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53568037-4	10.8298757108658	0	1.36900366536807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95652499-6	33.4338664835344	0.568871307408039	0.427651578050399	1.33022146206367	0.183445314851476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89078382335559	3.97927694690353
Merged-chr12-34787553-6	18.758870193291	-0.188997703428036	0.582382877285541	-0.324524828595485	0.745540728016246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10287621859297	2.7518675546106
Merged-chr7-145122645-8	32.5097942673545	-0.923119533355144	0.384903920237896	-2.39831159107082	0.0164708474876855	0.28360430743842	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96701159081255	5.10642012436828
Merged-chr18-39876040-7	25.4476370113219	0.297847632206003	0.338331112476625	0.880343607851263	0.378673195721913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99429884802295	5.2818196941769
Merged-chr2-173538480-10	29.006030725658	-0.165066090096368	0.497859952436555	-0.331551251086827	0.740228135130827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58990223015783	3.13246347355433
Merged-chr1-120533195-5	14.1749182266722	0.591445416933249	0.526778728898239	1.12275873053998	0.261539977152174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13848883591296	3.46565104945503
Merged-chr10-118767986-4	6.32143130446353	0	1.35125263065764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116869860-4	7.4185133530086	0	1.36724735067439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37657551-7	25.3446571145574	-0.194132557979972	0.433203255461719	-0.448132731073455	0.654057407210893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00898325449898	3.91948801503024
Merged-chr8-41600444-7	26.9845856949639	-0.750673038532284	0.426049285276594	-1.76193943863781	0.0780795302694304	0.78250833073672	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39076329482258	4.34347680039473
Merged-chr11-82011976-1	1.35482177335354	0	1.70667524503418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47445567-1	6.4654586111027	-1.50861406928466	0.687018593927548	-2.19588535538785	0.0281001501883753	0.406136503387282	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79142745250051	1.97596182099452
Merged-chr11-20899127-3	6.45672178862204	0	1.34962558790623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167224798-2	5.2044035415218	0	1.42798835233634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10213442-1	2.59885091941926	0	1.41990635251432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26463151-1	3.69718765285722	-1.34034695810888	1.43683207822078	-0.932848715187801	0.350898084668061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	0.577068348605183
Merged-chr18-52697395-2	2.86968637596362	0	1.45354628672188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70250934-4	10.8690793522978	0	1.35461899688461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-129959283-1	2.58067806830622	1.81567725937681	1.21643610870318	1.49262032455816	0.13553660004653	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	1.86501351763573
Merged-chr6-29354912-1	2.52239061138854	0	1.43363830678006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111691453-4	9.82953513051762	0	1.37523869887739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25534337-2	6.19324630138035	0	1.41879369335873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81767170-3	8.45512311928608	1.70333346252078	0.927105409672569	1.83725976005507	0.0661715572979456	0.708074740779336	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.17884592431967
Merged-chr7-38061240-8	28.0858772030604	-0.78763527678611	0.317904141193471	-2.4775873438741	0.0132274028985331	0.244733966698897	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07735559850141	4.3117530302347
Merged-chr17-27897205-3	8.05449766671514	2.42419441467523	1.11942917156889	2.1655630175134	0.0303445949931055	0.426448252127771	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.45526469271556
Merged-chr13-6636745-2	4.4360090406977	0	1.41571472910428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66185076-4	6.88776423423846	0	1.40104079271822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101137975-1	6.78603737880008	-0.020119295065407	0.794894004530323	-0.0253106640014159	0.979807168013975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15933350138276	3.97748674160956
Merged-chr17-71693437-3	9.70263544369886	0	1.37832046530898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57407800-3	4.61488378759102	0	1.4337885739237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107853956-1	2.590976387341	0	1.43725692513293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84784038-3	6.65928168875766	0	1.36182183985661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35452634-3	5.15078578295064	0	1.39161049061831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129606463-2	8.90249067527333	-0.235156313338428	0.651616941568877	-0.360881214617057	0.718188247184626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29975322992256	3.1484028955544
Merged-chr4-88390624-12	41.457429727389	-0.0857866713846816	0.378106240821625	-0.226885097686479	0.820513090226477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63067219589314	4.42455920634513
Merged-chr15-99498190-6	20.1116607617638	0.0918720918294638	0.440284609258377	0.208665235844184	0.834709580483072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6597719732411	3.69048524734344
Merged-chr8-56328364-8	23.8693006934907	0.207368821914104	0.42497633869532	0.48795380597124	0.625582561462381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7695276494881	4.95547187628182
Merged-chr1-184027242-4	11.7449929056099	0	1.35058039372661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113630488-4	12.568523401944	0	1.35006721984743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107757625-2	2.91785932238682	0	1.46819400903325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140514119-3	6.18568023203941	0	1.36271272290516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64297027-2	5.9959138421436	0	1.37296099113246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118098945-2	4.848547035359	-2.54811770193218	1.14592598656575	-2.22363200748129	0.0261732132336567	0.388009281380115	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9272926343824	0.303163067301871
Merged-chr14-67876976-3	6.9819025235167	0	1.3622800862309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100866390-6	54.3760219763765	0	1.33941125174737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31285467-4	9.88530641763201	0	1.35350274365154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6331356-3	5.39615536274654	0	1.3632675665573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3641233-4	9.39708952154238	0	1.35373304797268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7193442-3	4.97800850400035	0	1.41912526101894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120100729-3	13.271413455376	-0.491576223257222	0.657983198226265	-0.74709540392881	0.455005974328694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44386855405645	2.47241252483188
Merged-chr11-106418835-4	6.6949799099236	0	1.35212829917379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39545083-7	31.1466126717505	0.106222044732344	0.382810338355103	0.27747956125942	0.781411897652741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.56228206094151	5.73602500896623
Merged-chr7-119920659-4	9.52292286418497	0	1.36575211154777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35932393-3	5.9716765731278	0	1.37799291190962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6794219-9	55.0702625423597	1.61049792427359	0.61418893006512	2.62215394227772	0.0087375953626939	0.184024388345865	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	3.12144772594174
Merged-chr6-66952047-6	14.7388830794582	0	1.35730793089449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103307340-4	10.3595075416792	0	1.3513550013035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-84372626-4	14.1720560765764	0.0586047804133316	0.553879828824739	0.105807753529648	0.915734884899327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82386534115944	3.80380435492717
Merged-chr6-108569618-4	12.9702702454049	-0.57581150705425	1.20379846994385	-0.478328824492615	0.632416183725592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.465515277017237
Merged-chr2-135503790-4	8.77602525344929	0	1.3545610849751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41137297-4	19.1403888902594	-0.948477796393716	0.561277290098589	-1.68985600010133	0.0910555071333623	0.857123430292505	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62281396113882	2.56859927061245
Merged-chr19-43711787-3	5.45096494844621	0	1.36669303194347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45680099-2	8.26922617263589	0	1.42386841686059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38290498-3	6.10616703299944	0	1.36675114748209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183634957-2	12.1325020617184	0.215411091857331	0.766080618195457	0.281185931011729	0.778567794953156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96073424694151	2.557177523579
Merged-chr10-122535348-4	6.60814660710066	0	1.37586974761523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80062862-1	6.63075827863933	1.41834974657007	0.833117343639745	1.70246095270751	0.0886689922708686	0.843534783138282	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	3.32234097792181
Merged-chr10-43758370-3	11.3778547703987	0	1.43154207762429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132505498-4	7.90619383537259	0.624891957189555	1.36161250688457	0.458935236001421	0.646280674475155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr3-96570957-1	4.14316044060634	-0.397963014116127	0.923373280673413	-0.430988228104124	0.666476930019116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08153858449613	1.82415053547332
Merged-chr1-165609867-3	7.2308385981997	0	1.38667179427365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94478034-4	9.7972141978785	0	1.3707077795557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60670835-6	46.8091450989622	-0.214516442604606	0.336960725539967	-0.636621500208522	0.52437141711686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47541178321623	4.35145866142584
Merged-chr15-40023378-3	5.37980494951097	0	1.39347668338493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73291826-5	23.654589980757	-2.11965933601295	0.623557290194821	-3.39930166697385	0.000675581574624567	0.026884289030027	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27458234172765	0.956353103033036
Merged-chr6-128838858-13	73.4643480913345	-0.368260413862094	0.239271836760601	-1.53908800487268	0.123782813015225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.79892017346709	6.48816429983055
Merged-chrX-155247915-4	9.12927211925296	0	1.34556249517457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50632826-4	8.52987139195444	0	1.36142954132484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96917030-8	37.1151182096203	0.687101701457148	0.355682583983978	1.93178337201942	0.0533862492703085	0.616926684541816	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19724775402749	5.02681011616809
Merged-chr4-102658758-6	22.8797509016287	0.573935655038429	0.405954428588083	1.413793309349	0.157422598616569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02766237351928	4.60795624610278
Merged-chr4-40876940-4	7.222076362924	0	1.3593511263069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33156537-6	32.6868918051096	0.997003700418397	0.518666333468842	1.92224487321248	0.0545749529095513	0.626401998566364	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93807335876715	3.89332366126717
Merged-chr14-103342064-4	7.20091525562742	0	1.36571010336923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68220105-3	4.55415070587038	0	1.36686138244324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120994501-2	5.87056671770036	1.73938834198224	1.29043511216004	1.34790841135027	0.177687842379295	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.878778741524029
Merged-chr15-74939457-8	20.8038433628927	-0.251507977073756	0.403960328111648	-0.622605636175847	0.533543706521411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29636240031759	4.19919596553365
Merged-chr8-33968460-4	12.1396007610214	0	1.35148841766678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-95853669-5	18.5772128497658	0.363013079290001	0.73048624492838	0.496947179786517	0.619226299809904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	1.60650301571838
Merged-chr11-75594686-4	10.7598550980513	0	1.34960544061072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96455513-1	2.93076371111799	0	1.43991215768776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128359872-2	4.06470443170451	0	1.47146408824366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61564232-2	4.10580075858113	0	1.41073867295349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143142435-4	7.97074482960748	0	1.38827228008008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60031202-3	4.29862059818664	0	1.37878120844921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93590203-7	35.7900610159874	0.082622714710452	0.439159143726591	0.188138436579817	0.850768131022207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21870539772334	4.21315889112158
Merged-chr4-14922182-4	8.66796418376524	0.602248351736035	0.509670882599488	1.18164166778446	0.237347912863622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21527596580555	3.77423318125388
Merged-chr2-57330908-4	6.46161977192167	0	1.3697438367326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133494644-5	17.6960168749853	-0.289928367506316	0.420576299366608	-0.689359737919021	0.490596913607037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49644437535044	4.09459431193667
Merged-chr5-21045656-4	7.34825506315994	0	1.38539619601939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46162062-3	6.42866901402978	0	1.39082586505283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143052054-3	8.14571601529333	0	1.38385997685698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17585300-4	6.85704832688083	0	1.37354975716597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161359563-4	12.8001733512	-1.3836530629742	0.722371842020351	-1.91543050612875	0.0554376238020435	0.633761049895959	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36464606138474	1.58056713942428
Merged-chr1-191068599-4	9.54562093400303	0.358157013517741	0.766958347739511	0.466983656378932	0.640511571250099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	1.96344525659293
Merged-chr16-36939355-4	8.33026219682703	0	1.34349165362396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111053627-1	5.08406160118165	0	1.41863066339717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20919805-8	23.4895097326444	0.453967892221944	0.43108905858968	1.05307217424425	0.29230791470748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46554399185447	4.32224711043257
Merged-chr8-111052316-4	13.992257840394	1.07846259031008	0.587168228860953	1.83671823048428	0.0662515025511909	0.708651205663162	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39775123870216	4.38958820660252
Merged-chr5-120500271-4	7.82593742282826	0	1.35055870311519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64962432-10	43.4987143597124	-0.0904033085182881	0.31880656720869	-0.283567899211783	0.776741540377733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41740794298946	5.35630509653717
Merged-chr3-87959978-4	11.8277857763321	0.296527755196874	0.902504418472889	0.328561001062602	0.74248752949348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.4068548238317
Merged-chr5-21283956-2	7.49460471866927	0	1.645949211807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111369891-2	7.53604559754409	-0.0377396150921327	0.698122581746139	-0.0540587227500057	0.95688837860515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62235589016187	2.58934039553399
Merged-chr5-3501331-3	6.87917780443543	0	1.36152478741762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61375326-4	5.00723430404666	0	1.38430389983585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31233456-3	4.62663884129309	0	1.36903042448006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79168532-5	18.6514040314122	-1.61745713657261	0.448945658682295	-3.60279046092133	0.000314819303420086	0.0151444801014269	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11844664820198	3.25347183981534
Merged-chr7-67962051-4	6.70172168993255	0	1.35177791167552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32087820-4	7.1713845296702	0	1.36279735594917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63385953-4	6.48325217584974	0	1.35163199661074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114886001-4	7.74236241657609	0	1.34483009318479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38082745-3	6.93545771696587	0	1.36092045838706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129491857-3	12.5383732007705	-2.55099774559263	0.580944923239284	-4.39111806222275	1.12769284680469e-05	0.000969940750940762	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26533189121912	2.24688567344324
Merged-chr17-57409870-3	7.06426834017183	0	1.381583944695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44091660-3	10.7099782139694	0.300795642443254	0.773374019555103	0.388939419785904	0.697320960729638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	2.223031893319
Merged-chr2-148478521-4	13.7272769202683	0	1.37336860396976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192939248-6	18.6813064126879	1.06111394274673	0.484703241703731	2.18920331338597	0.0285820659401604	0.411131503127691	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40509578775502	4.00462736901796
Merged-chr4-136140570-6	58.8731466290612	-0.0880686279310888	0.330603237918506	-0.266387675104373	0.789940656255671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52389878560785	4.43023989784424
Merged-chr8-41047251-14	56.2933717778304	0.197022157568724	0.235620693439717	0.83618359106108	0.403051628122452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78497288520593	5.98546075133345
Merged-chr14-16454835-2	4.71532097652271	0	1.40904146143302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67709043-2	8.63392343039907	-1.35671732915369	1.10894189409942	-1.22343410089624	0.221165780039708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9094343094868	0.577068348605183
Merged-chr15-81534732-4	14.60913479059	-0.282155052788376	0.978578378141385	-0.28833158292775	0.773092933524147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	0.815004392037195
Merged-chr3-88488545-4	6.17381138170168	0	1.3723182864175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33138712-3	6.4105402842612	0	1.35843902274818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72153593-4	9.25686547008269	0	1.35725196449063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146822278-2	4.74245781190458	0	1.42290987743483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38190718-4	7.95066122596005	0	1.36269143424716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13554956-4	8.81648613476346	0	1.35508835114937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48558842-9	60.9146312120048	-0.225645220385447	0.289311283244079	-0.779939233116878	0.435426644017821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34012832455369	5.20331551127929
Merged-chr9-98333358-8	29.2644937508092	0.599891512560809	0.404213367009338	1.48409617672775	0.137783407372379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5269565692004	4.97955619071168
Merged-chr16-35047464-4	7.4346237950625	0	1.35243291150616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59959475-2	4.94343542424956	0	1.37810194913232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127004194-1	6.29975584974154	-0.904896294150712	0.799141101927376	-1.13233606927272	0.257493171369663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82986663084093	1.63227011204743
Merged-chr1-80676424-3	7.14201911311142	0	1.35696723236314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76152245-3	9.13748533957506	0	1.35281072171755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174180845-1	4.85694726155298	1.26146440523169	1.32610907445579	0.951252373979398	0.341476277282682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.88866493597531
Merged-chr1-173401572-7	30.7114067806645	0.302156851826189	0.270766722125274	1.11593053036404	0.264451872115162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10350873005255	5.3765337034939
Merged-chr10-21651647-2	4.658738848737	0	1.37854506014398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75642545-4	14.1448701895647	-2.51917303807029	1.17241996115807	-2.14869511056596	0.0316585765391835	0.438229835012345	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	0
Merged-chr11-110562504-4	6.5901169172611	0	1.36472620556214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137833282-5	15.8005206470145	-0.606403555009419	0.634153088266798	-0.956241586186671	0.338950194171627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34005910040985	2.21935457884883
Merged-chr7-75822537-4	9.91318009891219	0	1.35938765931073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125053023-8	34.7458564366814	-0.316704426134297	0.399406142633252	-0.792938295956819	0.42781377382324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14734594497453	3.78721053374258
Merged-chr17-80798532-2	4.63482647907261	0	1.37079112951146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39241861-1	3.20844840450142	1.06671276708152	1.31614062734859	0.810485403243305	0.417661251001843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.879366456215217
Merged-chr17-37017609-1	2.07692919879412	0	1.45898521744495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57745672-1	2.21412699951432	0	1.48579541951148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77406486-1	1.67968492697941	0	1.55617821056906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32698332-1	2.03739359939745	0	2.19901542894255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99269911-1	3.02224469958193	0	1.41528403149465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92669729-2	4.67014899906699	0	1.35985793749892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99994634-1	1.27133284365364	0	1.75415298626196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25743006-1	2.4815438983778	0	1.40358117791335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50251538-4	7.66781171747336	0	1.45411774811516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42074026-1	2.60700269718772	0	1.48603800916641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13608659-3	12.0230898164943	0.620044303403924	1.40181937568527	0.442313977220367	0.658262017970031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr3-31100223-3	9.0688011407918	0	1.38628411300368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123130387-1	2.59980648711007	0	1.46766714692918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100837354-1	2.49947691289142	0	1.55724083959853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5402238-4	5.8438398328171	0	1.36353350775686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129331958-3	9.41664874158477	0	1.36923215611773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116238842-3	9.62655623826944	0	1.35409600373237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58554225-9	28.3761099533151	0.891991840663652	0.43227479639371	2.06348334000773	0.0390667290592244	0.500030215429804	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69327287867033	4.7141847013296
Merged-chr2-102981631-2	7.72459110159029	0	1.37707633664334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100876075-1	4.49590224529236	0.72647094540382	0.88852595859878	0.817613642430297	0.413577835112352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54084633208408	2.01976648022517
Merged-chr14-46895105-1	5.14661089679808	2.11919112962119	0.894403455842311	2.36939058741161	0.017817425981769	0.297332440806709	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	3.53191213844671
Merged-chr13-110601555-6	23.256804283284	-0.259462841866851	0.452975897784929	-0.57279613139603	0.566782738773634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67265764069302	3.5872663682941
Merged-chr1-37317292-4	5.5157179480458	0	1.3814243806099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3221188-8	50.7498554333465	-0.18339721992212	0.351379521201791	-0.521934856348097	0.601715688219247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28763745185161	4.11569983023012
Merged-chr11-76593853-4	10.3680613682661	0	1.3554768793967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29007967-6	25.1155469345424	-1.23941479821372	0.35656408458925	-3.47599450360089	0.000508962717006368	0.021682370167515	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33829404749584	4.13342438793834
Merged-chr11-48809023-4	7.78884434820407	0	1.37195010061281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120602974-4	6.53721585355961	0	1.35744727232794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9181248-4	8.23905812208817	0	1.36356583163694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33661340-5	19.5836820671729	2.008200735149	0.592213973182922	3.39100532254533	0.000696367487205812	0.0274986783230314	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38035523516673	4.2139250108277
Merged-chr3-95609376-2	7.30706730142701	0.397775792189653	0.968301580337894	0.410797421244368	0.681221084240896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.838451940269823
Merged-chr10-37359550-2	4.66030179047313	0	1.379024397841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36821704-4	6.92909391507907	0	1.36479669347017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74668400-4	7.45602181290279	0	1.3573120097798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134558945-6	28.3419652018379	1.25403029165278	0.371834192237425	3.37255238445648	0.00074474917969013	0.0286509700345193	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74466169299353	6.03746124983326
Merged-chr15-84183532-3	6.57733934355103	0	1.37268987540361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56754987-1	4.3671478214217	0	1.39836560980586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-101045928-4	8.97031062270584	0	1.35496929206293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77854113-8	25.4982559573962	-0.382954652765861	0.409852444841829	-0.934372010184426	0.350112030655091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05807500243651	4.62462841894959
Merged-chr6-89050792-3	9.95201161705383	0	1.3573126425726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153174495-4	7.45037287538939	0	1.36303592330974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58632371-6	11.6206695671857	0	1.34245322254527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146758129-4	6.32094092396861	0	1.38547746212864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51692908-3	8.30793695854104	0	1.39526770883027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21424559-6	21.840686955504	-0.848764270774869	0.392964471086238	-2.15990078805013	0.0307803507561833	0.430125729243025	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77687647291032	3.97391454582263
Merged-chr14-66219083-6	41.4499590910156	0.225005454048768	0.467451591429226	0.481344931056534	0.63027136846443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23390106434252	3.5129037510194
Merged-chr5-138707573-3	9.00319381231806	0.381672991347699	0.731051967679735	0.522087359342018	0.601609507230785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10663323369202	2.40799833663131
Merged-chr1-105997467-4	6.85317849660664	0	1.3707120800021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42094667-5	13.6280671715872	0.686564979021523	0.598632777273041	1.14688838481087	0.251427753773141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	3.3017400966647
Merged-chr11-114909162-4	6.52697057268856	0	1.35969666510212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48108808-3	11.6223161572742	0	1.36308023487705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81155555-1	3.17812288946212	0	1.39352615449913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8561086-3	30.8894920990237	1.21841536521112	0.90207639887088	1.35067868612481	0.176798382714393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	2.06695797389053
Merged-chr11-24185143-3	11.3066805880938	0	1.34752507550644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32773296-4	20.4147421739263	-1.08222142558514	0.877143387378979	-1.23380218235352	0.217276626026576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82479655090704	1.53467426421905
Merged-chr6-66395339-3	10.4025396280494	0	1.36156208988438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57728509-4	6.96089842383259	0	1.35793998993735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-48853880-2	3.37955848613899	0	1.47011006474964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49855410-2	3.27940774935288	0	1.43918518493422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31382562-3	6.55972678851012	0	1.3561223188456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-98880519-3	7.63437955520654	0	1.36080761657965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138231669-1	3.26453750368612	0	1.46709442282436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59009300-7	20.768387270022	-0.476752348600853	0.483820473659847	-0.985391017032563	0.324432040375624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81544653180065	2.91595318078714
Merged-chr4-139602827-7	24.7103132658392	0.342440578664614	0.455616396625992	0.751598452559024	0.452292574200732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64208540149377	5.28909925690761
Merged-chr12-117379292-2	4.01071260082038	0	1.37868987844135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90645114-4	10.2595086744784	1.27988310492009	0.953625965407403	1.3421227518415	0.179556197960802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.86501351763573
Merged-chr6-32487587-4	7.48833543012967	0	1.35024956694339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77519352-4	9.0097426623811	0	1.37181531721242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71866105-6	19.3792820829964	-1.77740444753801	0.497055169663802	-3.57586955335403	0.000349065687950353	0.0164000533546182	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48027116619374	2.86182739410792
Merged-chr19-55655697-3	10.4986901866079	0	1.35833584793721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95731232-2	3.85099009960294	0	1.44972287416125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149103655-4	9.10982347040813	0	1.37832489963209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13189755-4	6.86040670744489	0	1.35491367132894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148795974-1	5.12727126919295	0.278594850767249	0.957676643229157	0.290907012024293	0.771122438317485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	1.7642478310873
Merged-chr5-124075726-2	3.34982014695931	0	1.38006210826087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80960706-4	8.36923134499052	0	1.38378706218432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60055345-2	2.52251067298464	0	1.43137377671277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58723100-2	4.31000839755207	0	1.38638678815384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13292625-4	6.67739178774401	0	1.36081867393915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53134232-4	7.35986547152493	0	1.35006681858918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144123272-2	3.21460010989829	0	1.5429822695259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33047545-2	3.25401422295799	0	1.46572596769747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59710071-2	3.44497690180818	0	1.41165152808013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128797034-4	6.62209287272844	0	1.36634524428988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57844669-1	2.85101136537928	0	1.43987736972461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110597646-1	2.90930958258767	0	1.43636753254526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65745668-6	15.0126088976246	-1.39636734849455	0.651643396704493	-2.14283971195948	0.0321259713211715	0.442222252481023	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67584566669381	1.37020428223102
Merged-chr3-65515842-11	52.8704418467971	-0.568613832501616	0.30118867157445	-1.88789913488184	0.0590394927192007	0.659270292671124	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23076575365161	4.67085888571544
Merged-chr6-47188435-7	26.047581694046	-0.712184812954989	0.33389104486064	-2.13298566678313	0.0329259020123402	0.449816312512892	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64190790585821	4.71109957557403
Merged-chr10-126502559-7	35.5892787324636	-1.29216224735687	0.402998308105554	-3.20637139503431	0.00134420374882715	0.0455830140876451	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2693055285647	4.95052363206014
Merged-chr5-118645351-4	13.2682074924099	3.53801439179043	0.709225683092152	4.98855932058896	6.08312329927935e-07	8.32928210139864e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	5.05512689479009
Merged-chr8-80338106-3	10.430578232904	0	1.34706173428801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155710729-4	10.5890996348266	0.798198274089715	0.658063410514659	1.21295039556364	0.225148786258871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98733255708278	2.98242849951284
Merged-chr7-139208216-7	23.7409605973311	0.285590628215245	0.305616650997097	0.934473391039015	0.350059755562415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38443087077868	5.63535687454014
Merged-chr10-118599819-2	6.28086000562953	0	1.381220419442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134253787-4	15.4568721278172	-0.794430069771853	0.63539476403304	-1.25029369888	0.211192279363136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39186914153004	1.7618556431244
Merged-chr13-105311285-3	6.98621060557384	0	1.36615067712953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170119421-3	5.41300688670599	0	1.39042456374387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118636974-2	7.52592630215375	1.60667655710522	0.844017760918081	1.90360515086503	0.05696162748612	0.64480989348563	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	2.28358877055452
Merged-chr11-58282732-6	19.2137785204216	-0.287602989181577	0.682630996976797	-0.421315455136522	0.673524746071519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68041597300842	2.12382511851675
Merged-chr12-33176093-8	38.4049520481084	0.566899111301332	0.523757524585849	1.08236938791399	0.279088424968868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17585887006086	2.75511489028153
Merged-chr8-126590200-9	63.6114207008334	0.249485119059102	0.301779481500227	0.826713326627922	0.408399566057936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.48107242939276	6.7224436352233
Merged-chr13-49169980-2	4.36939357470649	0	1.38331185515473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32064141-3	7.34382589136932	0	1.3693057928072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113600106-3	9.49447354287174	0	1.34734434733502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56981330-1	3.39521042520905	0	1.39535738499367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59616113-3	8.66716519405025	0	1.36243076324028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20931423-4	7.57393933347183	-2.14093542017373	1.24308625671923	-1.72227422562301	0.0850198544238042	0.823080011865284	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr3-109452175-1	2.35084447596758	-1.9232080744581	1.41097892057942	-1.36303104632373	0.172872726269478	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr1-77459831-1	2.54450619050512	0	1.49240267746512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98692393-8	23.7574742159472	0	1.36180794408147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81375243-10	41.6467216139823	0.425162035083781	0.264020414448417	1.61033773078501	0.107324146489636	0.952961986120572	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60370995527289	6.07932066983759
Merged-chr7-142392818-3	20.2482014188106	1.14217083575583	0.474256475079489	2.40833999275265	0.016025249245524	0.278311988414517	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29352953322432	5.25198197629305
Merged-chr7-122305612-4	6.81017453065939	0	1.37977329325549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125103311-7	22.4596972029452	-1.39355620288331	0.38928051606286	-3.57982520414221	0.000343824119253032	0.0162389630617335	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09571522539526	3.76608723787955
Merged-chr18-56490912-6	38.7784710853806	-0.925743456008057	0.494297371276046	-1.87284721668298	0.0610894857283441	0.674540596121685	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84856480171051	2.43262962994941
Merged-chr17-50120313-8	75.8730041498628	2.39055785423604	0.357649790190233	6.68407453270001	2.32388516728135e-11	1.01874253071167e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07499046871107	7.49201955873589
Merged-chr17-25732292-7	31.9588695192087	-0.161731708620387	0.372339563197718	-0.434366166279528	0.664022562745038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.30831364823424	5.4307542015053
Merged-chrX-10318415-2	5.12305798942228	0	1.43621916540737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39968893-2	2.90721786322693	0	1.43441911863258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67302075-8	26.7167951997604	0.930818604754575	0.326049993598434	2.85483399181102	0.00430593298320041	0.110408590110279	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98718869377876	5.88279017182754
Merged-chr2-90749853-4	6.75978801295674	0	1.38469966682109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126837489-4	9.8877548757387	0	1.3446520179403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14035050-5	15.0697710093368	0.911161199222195	0.635709381106457	1.43329833773463	0.151772596832278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99247473828349	4.0521912168597
Merged-chr4-119959554-6	32.8762490729383	0.135750889662002	0.441764126070444	0.307292696827889	0.75862059404212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60694727275576	3.88569700800911
Merged-chr14-102811247-3	5.95364863441276	0	1.35374796447126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78924799-3	7.99056844243232	-3.31057838524925	0.996700896295613	-3.32153647854989	0.000895232792037334	0.032881053609701	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37861092065192	0.55634759613363
Merged-chr13-107860211-2	6.00660962229784	0	1.37531373985141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65380707-4	8.3165616955844	0	1.36618597146162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112994623-3	5.97998900270904	0	1.40095660538523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80163939-4	8.01583111381864	0	1.35752770634151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156278842-3	6.88060649407806	0	1.37145464743319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78298844-8	25.5637412683901	-0.505766038352438	0.460757954516116	-1.09768270606112	0.272343063957463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82377268766083	4.38149886071538
Merged-chr4-102513823-3	12.489385278992	0	1.97663526634102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67352563-2	6.97203063301619	0.875186468740282	1.22226984883142	0.716033754393128	0.473970506727457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.887876939341704
Merged-chr15-85091544-4	7.9414759781926	0	1.34890188455985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69607141-4	18.7608335986258	0.0652253859402738	0.45855112406593	0.142242342275658	0.886888587494636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80188437870856	3.88401440657011
Merged-chr12-12208418-2	11.4774248785082	1.45536014283002	0.729037446856111	1.99627625316929	0.0459038613756134	0.557317853521357	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	3.53914337693779
Merged-chr3-81050031-5	19.2565435223866	-0.393968297929618	0.45975061595608	-0.856917390116676	0.391490541253994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82111522652745	3.39476653747323
Merged-chr11-110986291-7	23.4049005990224	0.00258360507081745	0.366717900630295	0.00704521122742274	0.994378781235616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55271884868297	4.82132906671535
Merged-chr4-137838010-8	39.5868616850129	-0.676526390300842	0.333093098049536	-2.03104295544494	0.0422506373223153	0.526163206003147	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3833416506777	4.74616636605312
Merged-chr14-40924938-1	1.86919145124639	0	1.42205058363988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94364864-4	6.74874438357133	0	1.36409580991106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96396241-1	1.74420918956922	0	1.55582911392858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103166623-1	1.76917947581949	0	1.7466935073877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98907285-1	3.46340639541643	0	1.43327069565043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34457411-1	2.98055312612235	0	1.40752404204516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17380287-2	5.08644299934654	0	1.381157493137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163745325-2	3.05516745043501	0	1.55538759769326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126667083-4	8.53168146196471	0	1.3672983670043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34938144-2	3.09734227606001	0	1.45019610604749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15790243-3	7.09595556205382	0	1.36355026131473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32728956-1	2.12461341278776	0	1.60943361115797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108517794-3	7.82735649973178	0	1.36485542023557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119056725-4	12.2548538727677	0	1.35498239564762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59620478-1	4.20348122637908	0.7709735426808	1.10648765485726	0.696775548553458	0.485943270527808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.52633957112176
Merged-chr4-59471515-2	3.26685768393139	0	1.42232972609752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36695977-3	7.02902734923833	0	1.37797983601601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128667361-3	12.1992583140967	0	1.35103725743898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28675239-4	11.1316957227901	0.759560129770591	0.6147230849729	1.23561347920434	0.216602271912173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50224159696657	2.54555707886033
Merged-chr5-146299597-3	9.61936552369488	-1.29870302358908	1.31762604933082	-0.985638546117583	0.324310515735054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr6-28293302-2	3.75112795833281	0	1.4395779526609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72223095-4	8.31823302586291	0	1.36077662119784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118680436-2	18.4500976493806	-0.103269691553267	0.365569679880952	-0.282489761150042	0.777567996443457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77426538480606	5.70031756210531
Merged-chr2-35271947-4	7.70882223102545	0	1.35384737066913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30013248-2	7.30445766207653	0	1.38343720101491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52331594-7	40.9058018340156	-1.65087772267272	0.453673315146134	-3.63891299654895	0.000273791271825444	0.0135423291584707	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43023197966433	2.74798343121401
Merged-chr19-17255177-2	7.43032792978889	1.09019950607375	1.19277618716675	0.9140017362883	0.360715933358565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.44257280273123
Merged-chr6-86654659-5	11.8029503321832	1.4128842169749	0.929666105316078	1.51977598074799	0.128567287820142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.94207584056134
Merged-chr7-27508785-7	16.6318960499777	0.734622050239574	0.524764096054842	1.39990913205084	0.161540531053866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93700308299504	3.88963120853083
Merged-chr6-82740422-6	24.7806836949429	0.613917533970709	0.474890395954126	1.29275626376325	0.196095371450367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68214485114944	4.70587977673482
Merged-chr3-8685446-4	10.2451368420027	0	1.35701065145307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119980036-2	7.03228072604481	-2.51043768423144	1.153583194546	-2.17620861338869	0.0295396651519442	0.419036184236569	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45391938817053	0
Merged-chr8-3330916-2	4.77881786172713	0	1.36701041986921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47032486-6	13.7978701985373	0.84114596520998	0.56608022410193	1.48591300207392	0.137302134005228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27306840521062	2.87396823564547
Merged-chr16-55789592-4	8.77930136273989	0	1.3771791838579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71444377-3	5.25425979114316	0	1.37519774638509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156417328-8	23.116701335929	0.000978070610644369	0.350703583768171	0.00278888114040749	0.997774797680706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83880559252686	4.62559762630274
Merged-chr15-7878167-4	14.1803392268034	0	1.37868062553269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36771714-3	6.23644356850151	0	1.36624004994826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34683619-4	6.12981536229482	0	1.36570754276041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53437386-4	8.20293932804103	0	1.35044703145277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58546266-8	22.4078797875788	-0.00288030077350646	0.393534957135402	-0.00731904681218814	0.994160297686105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93668628953206	4.94192284012154
Merged-chr11-50114534-4	6.36838518614881	0	1.38720854013342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22301793-6	17.7389847003321	-0.218813971663518	0.486053354009462	-0.450185087415853	0.652576988126608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35581291318951	3.91699414859341
Merged-chr2-58534589-4	8.17321070168179	0	1.35522600867288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135299191-8	60.4233303619835	-1.39876163171429	0.437855809979385	-3.19457136307076	0.00140038658290229	0.0467877162015893	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31950303420092	3.7682121952525
Merged-chr11-63898879-3	6.07731675449289	0	1.36771449114932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124513044-1	6.34811921469717	-0.90180596117415	0.936701060677239	-0.962746813291896	0.335674597731917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43545481046358	1.74618975104912
Merged-chr13-34277869-4	7.50930498380671	0	1.37020044325757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58857019-4	6.19751249743647	0	1.38837747889441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5260021-4	12.6450866355297	0	1.3467446168851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53612248-8	32.6474128773791	0.0782374513311113	0.400670925567514	0.195266105770702	0.845184629976292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31350680698951	4.46844379922303
Merged-chr16-27376756-2	4.76874455246882	0	1.38062264222578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60525464-3	14.2879080597806	0.493888469564016	0.602017120568689	0.820389408689024	0.411994151346681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14041680153139	4.3440571847832
Merged-chr1-182528619-4	11.5969673490996	0	1.36242851142567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15276380-2	14.4167925750208	-0.0396469015824179	0.515561086239485	-0.076900492765277	0.938702705539713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72306184695813	3.12681563542707
Merged-chr13-6633653-4	8.15025134981738	0	1.38318718860499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132155936-3	8.28402266608917	0	1.34575173552801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21128679-3	4.54915409837386	0	1.37187918596852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26791997-3	9.03687351017992	0	1.37898817368589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122735516-3	8.30938453775974	0	1.37812880261586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86947581-7	44.0541672920133	-1.7413171125228	0.289630718727856	-6.0121976017295	1.83025031394724e-09	4.92527607999297e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	6.47423002687115	4.80495481837553
Merged-chr13-78236856-4	8.08023776858677	0	1.35177693316261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65201654-3	17.3298442731323	0	1.35469788067409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22494101-2	5.48712363576248	0	1.36001091242068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35232824-4	8.43559070925989	0	1.35213216818322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78139889-4	11.7743614672051	0	1.37745465725849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20116875-3	11.5739529974524	0.629171067577204	0.695824594239889	0.904209297552214	0.36588443104762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30883726329241	2.78779937473772
Merged-chr13-102846682-4	8.37266528956475	0	1.36222769283651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31135768-4	6.66305909144181	0	1.36293025064334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-152165387-7	20.2369727258924	0	1.3393611814198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117360733-2	6.80115378384463	0	1.38377848100805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51509466-8	28.0699064427635	0.151938084799024	0.403350382856924	0.376690072097735	0.706403941636136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38549258776799	4.33443875672889
Merged-chr2-121418708-2	8.40944343944347	-0.217055342202111	0.652891757534277	-0.332452262871025	0.739547780369145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31021329933437	3.06775182179864
Merged-chr7-4950766-4	10.1698359566468	-0.615933910103254	0.838273583735896	-0.734764785689952	0.462482756768178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30945684676081	1.30064958020929
Merged-chr18-50066178-4	8.0828159290089	0	1.37942327557677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64463789-6	24.9970577639732	2.28369124337508	0.67317154882192	3.39243577268179	0.000692741705671307	0.0274066567529742	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	3.88175841345063
Merged-chr1-131990640-4	8.27380534386432	0	1.39439201098106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116191582-4	7.4696042870825	0	1.36506428430696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16349486-4	7.59838486867377	0	1.35853278409724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52296963-4	7.55396367472091	0	1.34698039041692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81767741-7	19.7804219822834	-0.00190258631579864	0.557784141298771	-0.00341097240837392	0.997278443055466	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5278814224759	1.93688050588922
Merged-chr19-37503193-8	38.3858822281223	0.305078690568012	0.319541157994216	0.954739891671589	0.339709251107794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60038082274368	4.78050185653829
Merged-chr7-5083990-1	3.76397985131913	0	1.4513199268131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166676665-4	6.41166322918379	0	1.38011029987894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106736439-4	9.05803069116205	0	1.34905582190603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44474396-4	13.2583412888423	0	1.34399196423671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91280130-3	6.65741633491815	0	1.42301571192852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8082901-2	5.07667680753261	0	1.38307041752643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52470375-2	4.39633260590922	0	1.49406885646268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104292752-2	6.79641543649695	1.14999111213697	0.936373760158709	1.22813256956502	0.219397206419147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38660038197036	2.55802334106756
Merged-chr13-5837565-4	21.8056321220833	0	1.36551841889152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113636491-4	5.33938526374615	0	1.3887137615793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24966408-8	33.53706823086	-0.286093075985984	0.248617410734631	-1.15073628649183	0.249840743467754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89867476698126	5.63693336153128
Merged-chr1-186584096-4	12.9116590531412	0	1.38028748527756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24434209-4	4.97715792062545	0	1.37688099931873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135466062-4	10.5065360287215	0	1.35803675168686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63243836-4	18.9482015874664	-0.942494306916849	0.903082526553828	-1.04364139400794	0.296651333916122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	1.02674429890598
Merged-chr18-65632113-3	11.358182460727	0.690034108665146	0.859848799884525	0.802506334553023	0.422260125622826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	2.00101204725338
Merged-chr2-181282371-3	7.84886842077582	0	1.40347201570237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181238987-3	8.18627012886553	0	1.37567919960292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32040208-3	7.22097244586194	0	1.41616694622468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144300835-3	5.07988738704064	0	1.39073316291327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41263820-3	6.47398849608241	0	1.38559782270413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102011303-4	5.95802358856496	0	1.35625588245198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84099868-4	10.7375684816981	0	1.38111558636753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120093722-7	22.2596373244027	0.71285744299708	0.369631121478982	1.92856445676102	0.0537849550934754	0.619821151987753	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26640917230535	5.05775484630466
Merged-chr9-63589466-2	2.93289109980559	0	1.4569110867233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35019108-5	25.007860694295	-0.206057391370958	0.501563116717498	-0.410830430912683	0.681196877646199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93093683901674	4.92998455840896
Merged-chr19-16029559-4	11.8538475290318	0	1.34864953499653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118518864-4	6.90193654786527	0	1.35013371461279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34190255-2	8.13260575711157	-0.642286322204562	0.960630187218213	-0.668609347020929	0.503744708530512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98733255708278	0.948471875794396
Merged-chr12-17682434-7	50.1531734414181	0.0658658837388939	0.356316205475855	0.184852338250883	0.853344855193339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48212224062172	4.51736225773766
Merged-chr4-105253817-2	5.85867631080604	0	1.3622859976933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67147630-2	16.1207880984416	0	1.36474810683688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37140336-2	5.43238107470281	0	1.38310183585906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11553714-3	10.0265634314121	0	1.46639868396857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65983015-2	4.48353718179752	0	1.40018475984436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21499293-3	7.49504160750298	0	1.38974543727781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18936902-3	14.771393099473	0	1.35451182831643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49132954-1	4.61200625440094	0	1.38247413961747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38598774-1	2.93619288833062	0	2.38460000583301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109271988-4	6.43227094833693	0	1.35329407082126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77252689-3	7.0129350199886	0	1.38064993057091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135977077-3	9.58046423493476	0	1.35371752456947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76114825-4	7.77517561056682	0	1.37348776932381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-25436288-4	7.60518556718285	0	1.36134800955402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130284054-3	6.49730394843078	0	1.35263941719702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47716364-8	33.662832026589	-0.522627550320875	0.391347519740092	-1.33545640117503	0.18172701569627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78412258643482	4.3188068350798
Merged-chr12-26437978-2	9.88409756054677	-1.16767594179888	0.830050605584729	-1.40675271356053	0.159500728722795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06008092031641	1.62805269464997
Merged-chr8-119422144-3	5.39666262100016	0	1.37973551961409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83575958-14	66.4041168279643	-0.668282455945094	0.264187461680161	-2.52957673197281	0.0114200200140408	0.219838640779659	C57BL6J_F1_Control-BALBCJ_F1_Control	6.19020427320443	5.51964832578223
Merged-chr11-78277493-3	5.54529377148255	0	1.37977025501372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33332199-4	7.54370487638333	0	1.36736617598568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11168160-3	5.41655804737314	0	1.3848495389578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79236414-1	4.91646251568328	2.90958710753834	1.23543549894924	2.35511049343571	0.018517198684856	0.304469571479155	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.13869887539473
Merged-chr17-26231220-3	7.79242286448568	-0.232275639193154	0.770189820842627	-0.301582328027956	0.762970481291695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	1.9134233865196
Merged-chrX-166757281-3	6.46179194854762	0	1.37168283611195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185193741-8	23.7094292994793	-0.0127411518907418	0.364908903529184	-0.0349159797623926	0.972146738374818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87951744212479	4.74568604479513
Merged-chr19-41495645-4	12.2845970668484	0	1.36402473205183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-139042735-6	31.1008714860561	0.00619711311604404	0.43177555927353	0.0143526259950211	0.988548654471748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07704065467007	4.08054762812039
Merged-chr12-85305701-4	8.90119009850323	0	1.35104880501364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105507889-6	29.0757727230976	-1.40956840782087	0.459366005230499	-3.06850831748768	0.00215130339748002	0.0659830422015726	C57BL6J_F1_Control-BALBCJ_F1_Control	5.68838921282131	4.2100383321095
Merged-chr18-79981099-4	14.3689907191121	-0.250423854534571	0.490313471697304	-0.510742349517108	0.609531482266848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08527332459365	4.83402267349546
Merged-chr15-99105521-4	10.9253934198045	1.80193084338441	1.47112881658292	1.2248627197514	0.220626948787891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr1-183633867-3	9.55482270479134	1.74791605708816	0.617471512547622	2.83076388395061	0.00464369876364416	0.11683487122028	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44575596919856	4.56978206574109
Merged-chr14-66186276-3	5.27727835716822	0	1.3654542164732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65575035-6	30.4901179667178	0.00528584285820113	0.401188300588514	0.0131754661101712	0.989487803150662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91939876920602	4.8440047580967
Merged-chr3-79002706-5	17.9589194006445	0.325309074461809	0.392893358720733	0.82798313395019	0.407680051663515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84669784236222	5.18635551124966
Merged-chr10-93365465-8	44.6060277382214	-1.43258719800224	0.274043027427661	-5.2275995176721	1.71724971834147e-07	2.74552874821542e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	6.26706522172637	4.80930725806619
Merged-chr13-52610686-4	9.76808370879169	0	1.38871583041716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69544052-4	8.20069295989338	0	1.35524196860445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25282295-4	11.6004472506058	-1.46086054951199	0.63998041191358	-2.28266447272023	0.0224501400368432	0.348676332075074	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10572669506988	2.01034866757273
Merged-chr14-77864267-4	6.69990744758104	0	1.35381500688559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-26410611-2	8.02266551372911	-0.68697391007562	1.45033090786604	-0.473667013748196	0.635737379469544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr13-60724189-7	43.0553259889812	-1.83105718400857	0.42435389068793	-4.31492964761133	1.59653739309511e-05	0.00129531606195906	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38153097345002	3.58357588927996
Merged-chrX-157644482-3	12.0525120048479	-6.38067451180386	1.01015442788174	-6.31653372562446	2.67495093968311e-10	8.60400343965883e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18263511273756	0
Merged-chr18-62186631-6	19.5119822281163	-0.300339266261164	0.43146534404048	-0.69609128614739	0.486371663255776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07869587197447	3.86698087872642
Merged-chr8-61586786-1	2.65836056815704	0.305474156146118	1.08858990784922	0.280614539913986	0.779006062724479	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.58309189503961
Merged-chr13-70641577-2	3.70820334768888	0	1.37952836525253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18931640-2	8.29378638866884	1.44886474973458	0.610384437275972	2.37369215408012	0.0176112268104462	0.295471814255879	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	3.89925960270577
Merged-chr9-53130602-1	1.79736403148661	0	1.56242790136614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148981964-1	1.87790717728453	0	1.50693592576173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22793890-2	2.82792831337899	0	1.4775965061007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73572768-4	11.1286527951681	0	1.34523074885234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85257172-1	1.08428206614829	0	1.83111937035404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59223502-1	5.88169570515242	-0.251028041496683	0.865455930318819	-0.290052945161758	0.771775733321581	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01077030735144	2.50100399006689
Merged-chr13-52985934-2	3.459961790078	1.2819715313187	1.40665629877893	0.911360886402411	0.362105255281107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr7-104404606-3	10.0474743673611	-0.181997291421032	0.614064083366732	-0.296381593307322	0.766938680622528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48644807420637	3.07142541181576
Merged-chr13-113382986-4	7.08870682154289	0	1.35465620926902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127320486-2	7.43126256316063	4.34958929368167	1.49632671184602	2.90684464779457	0.00365094465440492	0.0986926229310002	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.20891637002508
Merged-chr3-109491757-1	4.07825743861741	0.928510969041213	1.05035971742863	0.883993315465573	0.376699821292732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.02640015751263
Merged-chr2-68787929-2	3.59022928846853	0	1.43369547644964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-36848289-1	1.43358040610022	0	1.67655119212914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32619702-4	14.7068760239602	-0.0987780501540521	0.581365350105775	-0.16990701309612	0.865083265665255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65715691905728	3.5482744819329
Merged-chr12-71912227-2	6.59212810850869	0.329827028151825	1.0772587798885	0.306172513336082	0.759473299287583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.15786140276852
Merged-chr8-34759170-2	4.92721881675284	0.443443290312687	1.29232183653069	0.343136885702663	0.73149548302173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr3-117309093-1	2.1149664987807	1.1672966728969	1.47651106277817	0.790577668074184	0.429190482791378	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr15-96770533-3	3.17168911884242	0	1.45134339840676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28363740-1	1.82077557616478	0	1.63182326781303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57762700-1	3.77662710824017	-1.84635649039634	1.27358973461744	-1.44972626601057	0.147134868139732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr18-53850018-1	1.46882748985344	0	1.53879595893093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149163097-2	2.90884016017802	0	1.45575396048259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73004537-4	9.58056305964374	0	1.35218665314046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43722246-1	5.54023375989054	-1.21103928570866	0.744453512925261	-1.62674937344307	0.103790337899359	0.933014549011289	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09130938610903	1.93798617684668
Merged-chr11-97357809-1	3.32032194098628	0	1.45357985306882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54586286-6	9.65862465317076	-0.0367482201113755	0.913372019157681	-0.040233573331122	0.967906911643234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	1.28067447403188
Merged-chr2-129911665-1	3.10771254819325	0.629280343091338	0.999753236552477	0.62943566480598	0.529063875159194	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	2.63406669039082
Merged-chr5-115510121-1	3.47111937120605	0	1.3701852115778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120666764-1	2.66387937126118	0	1.50558220564894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133207015-6	23.8123919500291	-1.12045568937006	0.435956309144082	-2.57011004513242	0.0101666214150353	0.203753256612976	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63532903711656	4.08729736688782
Merged-chr12-40470549-4	7.52102909232106	0	1.36700145022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44419291-9	40.3108694374949	-1.0809611701134	0.337415547535824	-3.20364955914969	0.00135697539178691	0.0458730256978512	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10862648086389	4.0398627622278
Merged-chr13-54818959-4	6.33576227812931	0	1.35987646481586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105594726-4	12.2862911344294	0	1.35217428291913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19300689-2	9.05071418986224	0	1.37491176911591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-3697699-3	11.235583656978	3.124195608884	0.777037061410824	4.02065199208332	5.80372892035204e-05	0.00374240688471431	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64538595732494	4.17725169691718
Merged-chr2-90538771-8	27.3280788803019	-0.634113926735402	0.412096449545317	-1.53875124970149	0.12386503543533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72578413461402	3.32039776496438
Merged-chr13-58622796-3	8.5430763024044	0	1.41483972950415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114209091-3	5.7963901209717	0	1.36284816364101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137954322-4	10.8083145378594	0	1.35268442231087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34340656-4	7.12450362960561	0	1.35980047617211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5184354-2	7.94581771517919	0.362655504611162	0.853615550893164	0.424846412687426	0.670948641047574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77128661274154	1.60575736942423
Merged-chr5-62753020-2	5.2137537702712	0	1.37628663548813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95957323-6	50.4949295638927	-0.923150440264803	0.437336040288166	-2.11084922170267	0.0347852738080933	0.466633796426233	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49050759802682	3.64547337735279
Merged-chr3-144679358-4	11.8202967433163	0	1.34612569676533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72106407-4	6.06605188386448	0	1.35658113462602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19008037-3	15.3781582919766	0	1.36636260755689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101503763-3	5.97596274249335	0	1.36161245970783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137866472-7	23.6345194873714	0.0688818488172916	0.378462639025457	0.182004355818748	0.855579307547977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85213502251588	4.98098830853494
Merged-chr12-113216117-7	27.4625052899585	-1.00057568407218	0.401154803227581	-2.49423832401314	0.0126227760213825	0.237343992302432	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90041892979792	3.75958728866385
Merged-chr3-107062871-3	9.47593488711211	0	1.37512769403332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108843115-4	7.60137742682363	0	1.36368552226428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-40529107-4	7.0169552419507	0	1.35815604239675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10978171-3	6.07220148275189	-0.0358843248545229	1.35458485634902	-0.0264910128637058	0.978865701780922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr2-103927659-3	6.42175581888524	0	1.39208458755126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31898695-6	25.5219729053978	-0.438015291283957	0.456742375035037	-0.958998584815688	0.33755945811828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69748855883859	3.4911355280049
Merged-chr11-119954434-4	11.4173926579105	-1.15445564073557	1.24684356504783	-0.925902553534279	0.354496624156506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0.303163067301871
Merged-chr5-7994226-2	4.41435478726161	0	1.40361879977296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101696400-4	8.72968593233384	0	1.35784323387628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101583370-4	16.8085825746856	-1.49457099628909	0.521839383393036	-2.8640440791787	0.00418269801693654	0.10873064478047	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04077888210852	2.29110297178667
Merged-chr10-118086009-2	9.27805495109905	-0.751764294010466	0.534109523221219	-1.40750962363781	0.15927632560532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89399996912497	3.13161345125978
Merged-chr17-80706605-3	6.01982062792684	0	1.39207367517288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20595602-3	4.67460276656568	0	1.37314872389182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43655046-4	12.6965685931753	0	1.35639871215926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47690064-3	6.38170343489421	0	1.36170036281459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60381893-4	7.45255543955257	0	1.35056386320117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133854885-2	4.26372921562125	-2.3457431291179	1.15526309116121	-2.0304839192604	0.0423073741104294	0.526628474758148	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	0.303163067301871
Merged-chr3-8916485-3	7.38153052661152	0	1.35578964768114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30835964-3	14.6350835129242	0	1.39124546329965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84804628-3	4.03197983390393	0	1.403642012164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59312839-6	31.0772440279973	0.133887220337828	0.547283418217687	0.24463964352118	0.806735465468322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96384058082504	2.02162858657587
Merged-chr17-50393502-7	22.5141007170715	-0.146467602199996	0.502006449923746	-0.29176438315134	0.770466779044173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62682678624445	4.08610766231544
Merged-chr12-32827189-4	6.09895950145797	0	1.37487559230757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40650306-6	17.2775770199448	0.347630372255982	0.404752621861592	0.858871205471416	0.390411577228216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60265785215056	4.10444346745061
Merged-chr1-191116053-4	17.7274518113212	1.67665205248591	0.44107255776447	3.80130666252247	0.000143935026872462	0.00791919445927142	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54318759211267	5.21457422583322
Merged-chr5-21210616-2	6.69508946451794	0	1.35978555914314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104296871-2	3.52089438214523	0	1.40133538158367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4493011-4	8.56607492419872	0	1.3586482668991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34761566-7	28.4894511357524	1.25367443292149	0.434499612408787	2.88532923187513	0.00391004523331773	0.103488651821637	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62109550911	4.43312387988483
Merged-chrX-106139566-4	11.6442387131769	0	1.35284264309793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46904036-4	8.95120052178933	0	1.35517656491107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138740343-4	7.33953228416423	0	1.34678645523341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48858159-4	7.77112361819481	0	1.35400092062139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63277226-6	20.3185449641807	-0.138762070810255	0.539094610336292	-0.257398364127021	0.796871265592713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72359028120165	3.5312439946451
Merged-chr13-67844272-8	30.3751360492067	0.868265966451193	0.377020911848574	2.30296500582419	0.0212808120944463	0.334626457807927	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01365877018568	4.97990798979608
Merged-chr6-83652218-2	5.20095896105869	-0.620211158530977	1.06391810711477	-0.582950092101472	0.559926897935861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	1.30139522650344
Merged-chr2-37772058-2	7.27650609483966	0	1.34761394313352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148987843-4	10.1841974033035	-0.928121538351843	1.039109989181	-0.89318892900199	0.371756005821862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.67591700901439
Merged-chr9-63613777-2	5.38590166910996	0	1.38750085761257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62502163-1	3.24824414100211	0	1.41872808710882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-12160873-2	5.18194942168631	0	1.43033164706105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79533887-1	3.15340690768498	0	1.38183303570406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52625351-2	5.42443682523398	-1.3442063154009	1.34219880443139	-1.00149568824148	0.316587223636492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr1-144000822-1	2.74331747020199	0	1.40319160389191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185248907-2	4.44051983593647	-3.87827805457614	1.13032059772135	-3.43113101043589	0.000601070236658315	0.0246265235067455	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75824014947204	0.413263464506793
Merged-chr7-133047777-2	4.46625367168165	0	1.36602380645864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31715901-4	11.6564357908935	0	1.36194927180302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119713260-4	8.78200853099434	0	1.3589514183624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120628219-4	8.4441938714526	0	1.3555604141379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109055509-2	2.65091094264191	0	1.56598587103678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34715400-4	8.37192349473528	0	1.35658628617415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145214204-5	20.4194069448864	0.0272579178306671	0.491108770631947	0.0555028121277335	0.955737889651646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78754248269248	3.58544159040241
Merged-chr11-119053441-4	6.87479763505764	0	1.36344390684221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14585480-3	6.53284141393491	0	1.36812957129528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81591624-2	5.28633557847584	0	1.42646039125456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94574806-4	10.6474228075047	0	1.37037658029924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32160913-11	40.2942708864596	-0.156211673493056	0.349676639953648	-0.446731796306906	0.655068721206306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66791112857163	5.47862591716157
Merged-chr2-11331680-4	7.45059868107686	0	1.35667164017094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103411988-7	31.312163733964	-0.327460480794756	0.43555868572637	-0.751817129415428	0.452161039402287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49088941427271	4.33963988741591
Merged-chr2-30657890-4	10.0653448749946	0	1.37207155232049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69455729-9	32.3204122336408	-0.273465977134068	0.302775983981173	-0.90319573414737	0.366422021508497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76657130935801	5.47852742248938
Merged-chr3-144232135-4	7.91186630567005	0	1.35997157959899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82974115-4	10.4082092494685	0	1.34981154396768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64197846-4	7.63595468909986	0	1.36109789367678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14165775-4	9.25639752856786	0	1.34584833958773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59076445-4	6.693885849998	0	1.39708715994957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83665974-5	18.7042411074933	0.0182730884992622	0.873889470755177	0.0209100682761075	0.983317395057901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47190689055611	0.897114879832661
Merged-chr17-57338226-4	5.49225070174575	0	1.35588866306869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91789938-2	4.59259936665121	0	1.36591317183867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140766122-1	3.85545570972924	1.28241364076396	1.41679315726076	0.905152339416567	0.365384687218451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr10-122739291-3	7.01290996958237	0	1.35096945450671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25272133-4	11.0072641101766	0	1.36006807036465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124526751-3	5.58458363113568	0	1.3826611688087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107866598-4	7.83266512821323	0	1.35968445154634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21961136-8	32.5066602819892	-1.2097037065248	0.270906289098532	-4.46539543452537	7.99209992250847e-06	0.000736343321504471	C57BL6J_F1_Control-BALBCJ_F1_Control	6.27604512210182	5.08971875339175
Merged-chr2-165956540-4	10.5311300556269	0	1.35539064289384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100376780-4	13.842378689405	-2.1048116058993	0.508154689563789	-4.14206864391257	3.44187288940624e-05	0.00242982816097707	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03036408586643	2.57446180056629
Merged-chr3-87401563-6	32.557800902336	2.87300127001224	0.379817235238295	7.56416771927094	3.90355810966881e-14	3.42247605295947e-11	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17272785327624	6.23878557457941
Merged-chr10-117941576-2	12.6940342776996	-0.924010244701508	0.539276882727937	-1.71342453996432	0.0866344648452538	0.831895932613169	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26127523475505	3.22348179291981
Merged-chr15-12373739-4	6.51219121930804	0	1.38453165157633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59481977-5	14.2784545001997	-1.47130730005778	0.894628682912683	-1.64460108216917	0.100052103556277	0.911451133413967	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66210910851734	0.990919527803163
Merged-chr3-9556568-4	14.9346521104233	-0.788500365146144	0.424172519864168	-1.85891430543083	0.0630392860519971	0.687964776249851	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74186440555894	3.92346097482291
Merged-chr17-86658024-7	24.1549173244449	-0.369069834712598	0.541194710063285	-0.681953884341258	0.495268111358648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34903645826337	3.11172627151057
Merged-chr5-141084918-7	21.3780699848546	0.318898551050651	0.458752826983516	0.695142421568357	0.486966051855731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46870648127072	4.27569280669766
Merged-chr7-55912016-6	23.9192810458303	0.12892139595588	0.418371231378256	0.308150719472677	0.757967649115684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02858678969315	3.85409230707593
Merged-chr4-132178762-3	8.90115168689415	0	1.34484958064142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159974756-3	6.08117274602641	0	1.37989260228024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47250015-3	6.27698305984998	-1.78869050800079	1.28450592361973	-1.3925124634383	0.163767270151216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0
Merged-chr7-101362131-9	40.8449990247904	0.106071601496268	0.363995949647928	0.291408741220512	0.770738729987146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69495875876639	4.90939501211208
Merged-chr2-148491344-2	4.24117291631447	0	1.42461499747402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131957901-2	4.67373055955391	0	1.367733383081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103472867-4	6.2366952047078	0	1.36135989561107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68096746-5	13.5688996307994	-1.57659174313453	0.75596715005797	-2.08552943472958	0.0370212691746242	0.483643155747031	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84583565619994	1.40298672487694
Merged-chr1-181170471-5	12.8866301613599	0	1.34943737386167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96017604-3	9.85008494101855	-0.0874808947714139	0.787746438762916	-0.111052098069519	0.911575033900954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	1.97656658922368
Merged-chr19-32495624-4	8.45565315874192	0	1.35906611893819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71376626-5	14.6602187068538	0	1.340976210056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16900173-4	13.135882659862	-0.0359759389487753	1.36293945945065	-0.0263958451707576	0.978941608070221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr2-152767782-4	7.04289643039665	0	1.35290655572148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66729133-8	26.3856195820785	-0.323122065782451	0.355073694019458	-0.91001409348208	0.362815077265864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60877787053888	4.18371173686689
Merged-chr13-97235234-3	3.64059190300689	0	1.38782565337521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46184993-7	25.7033605732521	0.878217665733814	0.432656499157815	2.02982658862932	0.0423741692730152	0.526856694307373	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94035601549427	4.71984639586268
Merged-chr7-75551142-2	3.98323434483078	0	1.37888433194815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64461930-2	9.57268140672056	2.20273297515367	1.17390000996932	1.87642299722891	0.0605972191672823	0.670957911219113	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.38572824442771
Merged-chr5-64716795-8	32.9879861609998	0.169093718233381	0.325579481100477	0.519362331010036	0.603508094495601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34697176240821	4.63178913012812
Merged-chr1-127083982-6	21.9460762117543	0.699359083643298	0.473372153740448	1.47739802207876	0.13956897605383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42057366625618	5.38599163593634
Merged-chr14-51084002-7	42.8869912899096	0.19155567223032	0.269812071919428	0.709959605838255	0.477729185789767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28510163493459	5.51837714180757
Merged-chr3-87214702-6	31.7521051161952	1.76483916774003	0.364655907236198	4.83973831965621	1.30010201703171e-06	0.000160899908648807	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7247282154842	5.63034808354052
Merged-chr13-97573282-4	10.1592586322529	-0.209780760694292	0.70323512964896	-0.298308135998568	0.76546799519852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58596880210664	2.95031018941741
Merged-chr17-13685771-8	46.2713568731786	-0.515760529997072	0.386569634228063	-1.33419825131115	0.18213889249084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24810223473754	3.35608730523278
Merged-chr1-162521952-3	11.1662762710486	1.50599386913143	0.917607718123598	1.64121752616795	0.100752268872942	0.915239402350306	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.78692381606422
Merged-chr5-88631695-4	7.2805660104923	0	1.37203451367444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24313759-1	3.105843174998	-0.968995728803887	1.44251032747813	-0.671742663012983	0.501747536192218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62319166842064	1.32509503823899
Merged-chr12-91803782-1	2.26223277240081	0	1.67704125863944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-61772211-1	1.94869337633704	0	1.46703968414586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50888119-1	2.82468552466764	0	1.44491354194495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35266855-3	15.5362608962304	-1.43528546292128	0.593712102075947	-2.41747718785371	0.015628513581625	0.27413495722848	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56126212538144	2.34695791138986
Merged-chr14-120360415-1	1.76565940869945	0	1.49777250717435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120020417-1	2.97933772351551	0	1.41653367643829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65497626-1	2.06522016986274	0	1.47560295419124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-19314710-1	5.29236349671033	-0.0613469054512581	0.927476527462237	-0.0661438900444367	0.947263268134545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38238325143439	3.63994004912571
Merged-chr1-157499382-1	2.8044733933069	1.18025362628927	1.41485046424763	0.834189658987666	0.404174117473094	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.977756232605852
Merged-chr8-43368400-1	3.68370306211295	0.521447573071677	0.981454768912197	0.531300666712973	0.595210443470124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21567513147444	2.24992080272587
Merged-chr18-74913889-2	4.78892550073035	0	1.41417059694477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13200586-5	26.2558531350767	-1.70508038126603	0.509137707037011	-3.34895718329123	0.000811163301258107	0.0306208513146454	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45011520637762	2.84411961082777
Merged-chr1-78910463-2	8.36104743351297	0.889883495440215	0.718916191902459	1.23781256489067	0.215785568375803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18210741161866	2.59994580988212
Merged-chr7-55850960-4	6.73552968746094	0	1.36594351329133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5392594-3	6.21457025733284	0	1.35950506907582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3852800-1	3.75529222288147	0	1.36628907621465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123050898-4	9.71690725728594	0	1.34463674465259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22444537-1	2.54587119660546	0	1.46583900263855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26695677-1	4.63780079804651	-0.483315352606068	0.961243505298369	-0.502802203543677	0.615103344242806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74374772464511	1.32509503823899
Merged-chr10-99461321-3	5.28892927684675	0	1.3907217431068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28709203-2	4.45986950417399	0	1.38227521937779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3487434-1	1.57881326276795	0	2.24016717847018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12136804-2	6.19688676639463	0	1.40059733913559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27385354-3	3.60997694430503	0	1.41588306378025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4086029-1	2.10136858187451	0	1.44830724136354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39250379-2	3.24738087393102	0	1.43883837313572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96437156-1	1.72521404779004	0	1.50975332590586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24633343-4	6.72935093117207	0	1.387154326216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25516251-4	9.84746767516049	-0.0398578156007122	0.967519485641885	-0.0411958789380548	0.967139739016638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	1.19182800327718
Merged-chr12-110705964-3	5.73803076293229	0	1.35889515911049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72296874-11	48.5069818255955	0.0398594641359284	0.317285806956654	0.125626369859569	0.900027688191754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60819315695851	5.7549018806904
Merged-chr9-47625865-11	35.639180209183	0.264704635874532	0.382091972036311	0.692777276800194	0.488449334483214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63550017703278	5.26500843077283
Merged-chr5-65120087-3	7.6882647037923	0	1.3546412638595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21252496-3	11.7803700027853	-0.534519122741424	0.693509211621187	-0.770745526929485	0.440857780882825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05842035625806	2.47175683101492
Merged-chr12-25339842-8	29.7807050011315	0.110498701998337	0.462602632446913	0.238863106796128	0.811211734057438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26996436434636	4.02836583516203
Merged-chr1-52734413-4	10.6487485590889	1.99326834277289	1.1436877394236	1.7428431503318	0.0813610166170863	0.802086235453064	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.58383754133375
Merged-chrX-36870612-4	9.51807128340451	0	1.35523766733715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79524855-3	5.61557534022501	0.28452983965607	0.913597034204475	0.311439101708367	0.755466832014642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.79957942362569
Merged-chr9-45261611-4	10.0691087635935	0	1.35384844337537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34157148-6	20.9948548754071	-0.233801008305554	0.36947520192705	-0.63279215245335	0.526869382102342	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24546940723055	5.00300995749805
Merged-chr13-81108671-4	11.9436020975806	0	1.34671379935457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90777777-4	6.98934628257807	0	1.3622743624958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36136536-4	6.68936751277536	0	1.36517683676911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79408903-6	25.4602796000909	-0.170356580334127	0.438574421972294	-0.388432548273162	0.69769596138969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68564129988488	3.41537766968481
Merged-chr3-100176171-7	27.3597243767538	-0.037191433775535	0.324800504296565	-0.114505468075187	0.908837112013732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83840103539316	4.80067246838428
Merged-chr7-127750704-4	5.91993849483589	0	1.36134228696637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-52172561-6	28.4032391962578	-0.82797676361206	0.517760967647347	-1.59914867158546	0.109787572176941	0.964282216184576	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5390109627999	3.43550519812418
Merged-chr6-21958280-4	5.63711494198467	0	1.37714141057343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17837890-4	8.0545034093401	0	1.35247455862846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-39053509-2	6.15150668000806	-1.58530918218999	0.903485270869829	-1.75465968655331	0.0793175354975133	0.790447680723424	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5295541273278	2.18460570167449
Merged-chr2-120424450-1	5.43179987247946	-0.610599231876437	0.868001068764572	-0.703454470102789	0.481772571241144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96275318189595	1.25298535761957
Merged-chr6-137405903-4	7.19185528965763	0	1.36091370734136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66823167-3	5.42214468652998	0	1.36967288434563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47216906-3	12.8026801653377	-1.38528248161058	0.554881408060998	-2.4965379295215	0.0125412255820307	0.236055568356513	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95048727893199	2.65221179041038
Merged-chr13-9449170-4	5.94807005123813	0	1.41860576972514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74808521-4	9.75651279410108	0	1.35657469767671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-18036044-4	8.30894528034152	0	1.37334991170907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80376345-4	7.19580974351116	0	1.35707861698207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30135308-1	3.47365162937243	0	1.40748170106942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59593725-4	9.7057617364586	0	1.35424920160269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95048321-2	5.84080584048498	0	1.43497003193591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-151493510-1	5.23760975544716	-4.11938878166577	1.10383025724202	-3.73190420777041	0.000190037771846787	0.00994250552436909	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98030565572904	0
Merged-chr13-20232284-3	8.02867943694332	0	1.37022850753729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185350554-3	7.64227721397705	-2.45485057099773	0.892649887635521	-2.75007100208147	0.00595823527243995	0.140148728331702	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47248798210547	1.13759034240505
Merged-chr6-30035246-4	10.4243641553691	-0.115552989590961	0.590319296954074	-0.1957465903405	0.844808515939356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48868985467357	2.37902766497761
Merged-chr1-36123892-4	6.01702584898924	0	1.3727453594055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126815078-4	9.46406162253846	0	1.35159354355081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17333999-8	22.3852330604101	0.437123182063705	0.401242841266667	1.08942300548907	0.275967390959384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27991907589094	4.78748658673151
Merged-chr1-155108051-3	4.95899792937522	0	1.4255627238078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11138430-1	3.28567299707865	0	1.41190030525385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27435077-4	9.60012818949394	0	1.35068421332662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37504454-3	5.30477640235767	0	1.39782153020281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-76352123-4	6.54216706526074	0	1.36797393674842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139467926-2	6.40967291940086	0	1.42866733167642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-90602000-2	5.09254557695265	0	1.40098505468873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139037316-4	7.07517921144667	0	1.37935378128193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65854240-5	13.4988457714086	-2.53151804062471	0.783762156787391	-3.22995696934552	0.00123808850646625	0.0425957298246828	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81548509274515	1.13341594473881
Merged-chr4-136147720-7	58.8375159548676	-0.049574659120985	0.365051898356823	-0.135801674622516	0.891978067170272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47420239334898	4.47256390065253
Merged-chr14-64658530-3	6.7192264968408	0	1.35292558588344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106561036-3	4.57541581671287	0	1.41242948534868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5359466-6	16.6747307997086	-1.06057185323259	0.479325813956502	-2.21263245657125	0.0269229954863467	0.394682956117928	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37541521119404	3.39230052573727
Merged-chr2-122743039-6	18.1528087546524	-0.219915919306987	0.686892594129437	-0.320160562490424	0.748846617510266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32843128278891	2.49007067949285
Merged-chr2-131206984-4	6.75108446042194	0	1.3887949009206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71166992-4	6.18793163433169	0	1.38921580572927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90275318-20	124.947325234961	0.287468174109394	0.21586280463707	1.33171703477454	0.182953189410271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10276523431244	6.30089693061786
Merged-chr1-152548195-4	6.07131204712457	0	1.36534609783568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105204362-10	37.0092098117712	0.352058180572771	0.330211692435007	1.06615903869626	0.286351755051608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.589610945581	5.1190554760682
Merged-chr4-57027270-7	69.2642370755492	-1.14171625521165	0.323143766763316	-3.53315264796023	0.000410635299986899	0.018632491045065	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77669334527933	4.81834880057698
Merged-chr1-34479306-2	4.75682479537142	0	1.39718102860336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37223911-4	5.76435162743538	0	1.39367949071272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52619403-2	3.86277610032136	0	1.43488007433773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64486982-2	3.29722619927009	-0.0287995871503457	1.42376281324892	-0.0202277983961578	0.983861652506183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr12-73612905-2	8.72426456306777	0.551352145405055	0.654743561150503	0.842088686502283	0.399738313449434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64685074399206	4.60646481059217
Merged-chr18-56523765-1	4.07114817228448	2.09317874770703	1.14193092049131	1.83301696288814	0.0668000485192923	0.711996830874551	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.65343968672879
Merged-chr19-55552934-1	4.14370323735651	0	1.39715064615319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43094769-1	3.88494428006258	0	1.39652572107863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46964136-2	3.25648620848444	0	1.45483918118591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91785861-4	5.1769236822599	1.27366453754648	1.35117627095371	0.942633884953799	0.345868201567348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr16-21687601-4	7.13473422490329	0	1.36560552051695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168473142-1	5.33831048743949	0.936034131543522	0.922827965106168	1.0143105399237	0.31043459630967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	2.18140898269418
Merged-chr8-79496504-4	8.47587650007574	0	1.35612403596697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114812866-3	6.70506603470158	0	1.36289172110066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65691584-3	14.1778668087962	-1.71301180446079	0.565720933102883	-3.02801558900288	0.00246165388250079	0.0730022058913588	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54470949157123	2.97788092085076
Merged-chr11-97826680-5	15.8288962415963	1.27423300532286	0.575304936584104	2.2148827939643	0.0267681103951113	0.393692563032428	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11480110409737	3.73692245474744
Merged-chr3-38116218-4	7.62929605309706	0	1.36461330776392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56631540-3	7.05158842676487	0	1.36531674211822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86038357-3	6.65294504357254	0	1.3552295882555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103469483-7	45.0527561437856	0	1.33526520011726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131146507-4	10.4505474003604	0	1.34596689923405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61139098-4	13.2528360847835	0	1.35788627356579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85507942-6	17.9473808636405	0.260660025902481	0.58770207245038	0.44352408834578	0.657386699805329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77979544312931	3.06070879774377
Merged-chr17-34047553-4	12.0757257642862	-2.63592212378023	0.710613704489095	-3.70936010258255	0.000207783728231976	0.0107570625552019	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1749151188847	1.55805245852208
Merged-chr7-27526658-4	7.77949646799598	0	1.35811629988036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60763067-8	54.18138509771	0.345777688801693	0.307628705045714	1.12400983110568	0.261008855317511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92371961989486	5.23083481788118
Merged-chr12-76191153-4	5.36598102191011	0	1.35990750736314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118540465-9	51.7311965288199	1.09063906989387	0.315054876752441	3.46174317673189	0.000536689027280965	0.0226329548750706	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17687184890867	5.43635564108162
Merged-chr5-105684098-4	17.2051775618486	0	1.35750966235039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90243096-4	9.86520135285011	0	1.36148789136849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30900461-3	12.180044711642	1.34058269849346	0.60815971981472	2.20432668395382	0.0275013776508558	0.399932420471608	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96134329274887	5.18937652957092
Merged-chr12-85516035-3	4.83560989780503	0	1.41803489771607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68059585-3	6.76932476907871	0	1.36326737176548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95036359-3	11.0174202162352	0	1.35990191066658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89178146-1	3.02022195329485	0	1.41746879198476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107057285-6	21.9485654324087	-0.10578008327081	0.405479497609356	-0.260876527406374	0.794187726633999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47914355279836	4.38662122200672
Merged-chr1-171663971-3	9.77658045930993	1.15869207658612	1.15308241591285	1.00486492604159	0.314961895325742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.14143228603163
Merged-chr10-7936723-4	6.86582532043435	0	1.36374751550515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120623139-1	3.24742046960124	0	1.43704580872382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78213284-4	9.83243398594807	0	1.35803682074361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118748484-3	7.1223389118131	-1.72856784408121	1.05346890863822	-1.64083422862063	0.100831830926581	0.915503173098045	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52860153008918	0.904676873936758
Merged-chr1-89902393-4	8.23001161321451	0	1.35323850302746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14386056-1	5.53904919351573	-0.695332324277463	1.37366886866345	-0.506186272499577	0.612725890896801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr12-40575193-2	3.49574810121899	0	1.42854615220452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103233103-4	6.09115171429641	0	1.36652116526121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57776814-4	8.40365339448953	0	1.35678648910812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46315509-4	6.87272458485975	0	1.3822530524368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-52289256-2	4.30496168861841	0	1.39896740788909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8934079-4	9.75606612932902	0	1.359265067485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97087487-2	4.97811773665534	0	1.3827574875108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26950000-2	5.41740407717408	0	1.38027931763178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92499717-6	36.9323967011655	-0.0372338742170404	0.340434564719788	-0.109371603461263	0.912907755764408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54209946908129	4.50471055577475
Merged-chr5-66079932-4	8.07209033827534	0	1.35252572586706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50163107-5	13.1475179089632	0.0442891150505403	0.602135459803764	0.0735534078411096	0.941365745816496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31205403547308	2.33014490457711
Merged-chr1-171843119-6	16.102522879359	-0.67495538476392	0.423699390634732	-1.59300532330903	0.111158996847882	0.970526749964851	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34730386992927	3.65378771870118
Merged-chr16-33963856-4	7.81888776803912	0	1.3599444043607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119396758-5	23.5510700293152	-0.334996340034084	0.586381309013198	-0.571294369184172	0.567800117991422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77291256438237	3.79140478504666
Merged-chr5-62893263-6	40.8215949157768	-0.269556362878265	0.603895345460302	-0.4463627098712	0.655335264658489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96006934525357	2.2947317631734
Merged-chr14-30580058-4	27.5387849169438	1.90568392497818	0.380063632012001	5.01411806988678	5.32772653315481e-07	7.38800731162659e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02689501421254	6.14790574439638
Merged-chr5-64209994-1	3.08960941261368	0	1.47376369594596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70981241-6	42.9139653757171	-0.838435680652127	0.385528263908122	-2.17477098086884	0.02964728272968	0.420014762028323	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66156048137521	4.01924483304635
Merged-chr2-129355717-2	7.03526842302388	-1.88560081328409	0.897728722879204	-2.10041270288932	0.0356925525398714	0.473915843555171	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15332090608726	1.83064801361452
Merged-chr14-70168138-4	6.20732919709895	0	1.35264105373776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118678578-4	9.63604389959365	0	1.35572313479434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8350896-2	5.46869858273075	0	1.4045755907021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79621608-4	11.9231082771594	-0.16088208336286	0.492909366758976	-0.326392830431905	0.744127161273077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8300241714585	3.58139809737101
Merged-chr9-116134872-9	35.7602657988455	-0.45624110888869	0.398092659497868	-1.14606762522114	0.25176717197762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46561179454582	4.04217101346339
Merged-chr19-21445283-2	6.40197509855776	-0.034355886342957	1.29476846191309	-0.0265343861497786	0.978831107066468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0.71701424649985
Merged-chr9-57638076-2	6.67652399899459	0	1.3740552711692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36574015-4	12.335489101443	0	1.35800146920607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82793723-5	18.283551141233	-3.561767989083	1.09101731053105	-3.26463013437369	0.00109607100183443	0.0385530167181762	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16448544747254	0
Merged-chr12-73658638-2	5.18736847433425	0	1.36100082540519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107577599-5	17.116134236414	0	1.34738607079029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-54507793-4	7.72665690016677	0	1.35811093960246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21411535-6	62.8462901261968	0.017335511260653	0.35241552023556	0.0491905443014136	0.960767446700042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48517690684869	4.53023922786444
Merged-chr14-27341309-9	27.6244273506341	-0.993255109839061	1.00393709111421	-0.989359909729706	0.322487081921991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	0.577068348605183
Merged-chr10-13837147-8	28.1358830669289	-0.801099334829385	0.361198770762855	-2.2178905347254	0.0265622970436213	0.392150979085881	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26498625306689	4.5986536852201
Merged-chr13-46521708-2	4.03314168096684	-3.08001131092759	1.20527841626781	-2.5554355486303	0.0106054999695361	0.209221510558417	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	0
Merged-chr7-122257282-1	3.26099586204017	0	1.40895770547783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66680344-1	2.62661187490083	0	1.49762269111835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37847761-4	8.46561385983784	0	1.35766862154882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130657923-4	12.0918329124053	0	1.36288617282668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8355773-1	2.52355330153475	0	1.43233192949907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91188130-1	4.00993257931156	0	1.38279557621385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126890818-3	10.7795944814235	0	1.36466470293851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182368526-1	2.45325338624507	0	1.45785245037123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87542801-2	3.44986397502152	0	1.42792125566594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94585991-1	5.38019636882856	-0.404419535723442	0.848148225798257	-0.476826483180828	0.633485685739712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16404752080749	1.67273088548657
Merged-chr11-118173213-2	6.25054878285272	0	1.35867010937283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165407960-6	19.4596393420096	-0.0373013143710184	0.629465903761832	-0.0592586733421099	0.952746077133846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30730561679788	2.28102413707692
Merged-chr1-151104965-1	2.6677873022637	0	1.5165879390462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106762238-2	3.87011972911125	0	1.43038075132002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29382240-1	3.07198990289451	3.46054079576725	1.19516741308458	2.89544440208256	0.00378622093635874	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	3.8982920637156
Merged-chr17-80800570-2	3.53711956363054	0	1.49918887049449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116971832-2	6.66656537402767	0	1.36641027239401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62330086-2	3.86892742100666	0	1.38875576898785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39637612-1	4.81437898794538	2.09958602399471	0.929666178804547	2.25843003850539	0.0239188617392449	0.363509646957121	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	2.63675058290893
Merged-chr12-76596451-1	3.56428596508596	0	1.38834760365024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43381498-4	10.7852706601781	0	1.36629030344156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96632980-3	6.98928779668226	0	1.4005704795785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145807473-2	5.38064074820933	0	1.38838877119666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119966290-6	46.2192911429208	-0.433887630289306	0.375992846319167	-1.15397841883671	0.24850901686039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22500545947468	3.6063712091029
Merged-chr8-115618370-7	21.0385804271605	0	1.3393666763445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65112964-6	15.3568269439268	0.626601685580775	1.34298540606252	0.466573711636897	0.640804898783774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr14-21148540-7	21.3814388403936	-1.44326905675309	0.503446038677879	-2.86678004368317	0.00414671104218408	0.108110822801959	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35249975200466	2.95319467229125
Merged-chr13-47224068-8	32.5312014201612	0.345472202059718	0.461855030645672	0.748010044573399	0.454454098902188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64193270832665	4.94845643607153
Merged-chr18-82821631-4	6.22111769011383	0	1.36774786237976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86493616-4	7.46788038976287	0	1.35800414657449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-139062323-8	19.4582115129143	0.0526463910992703	0.496609345830374	0.106011680088785	0.915573085039809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21091301806504	3.90060471382628
Merged-chr13-24599788-4	8.42833543207658	0	1.34274330767821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103336679-7	23.6708262429901	-0.529764479941988	0.442669275081273	-1.19675005644954	0.23140399007438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23773830943643	3.71953004969481
Merged-chr1-160280779-6	22.3616445290654	-0.404858984264477	0.503226001355056	-0.804527157130787	0.421092591833355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53506492140294	3.45964258385842
Merged-chr1-149826345-3	7.671050726615	0	1.36164338035442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16538174-3	9.81621589550029	0	1.35670630436644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43384836-3	5.82258386503733	0	1.38068396161547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144337422-4	6.83659537394528	0	1.35094370258473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134319747-4	11.6961946289033	-2.19043915770183	0.779831122770141	-2.80886347536488	0.00497167250149598	0.122564691840735	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54335784812668	1.38647389072186
Merged-chr5-125352080-4	8.26905698906779	0	1.35746822033646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21425931-7	26.6835148007063	-0.267157181460956	0.429360423158805	-0.622221255269596	0.533796391457095	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78755528605218	3.64979912448127
Merged-chr3-122943605-2	4.54380562419117	0	1.46592116508923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80373110-4	7.97319205853032	0	1.36158750721688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29437502-8	79.3546417255239	0.00322074665629183	0.333173409305142	0.00966687786702108	0.992287067525955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89048791322159	4.87053885958829
Merged-chr3-144110905-4	7.5400053640325	0	1.37449468562194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118486055-5	19.7924246407353	0.674541562062124	0.486467025644288	1.38661312381604	0.165559764309876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15327122023552	4.55622271869457
Merged-chr4-3780575-6	14.6093318688218	0.213349395091334	0.554139199212698	0.385010472809816	0.700229656351871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81110452458127	3.75742344112364
Merged-chr2-128751101-8	22.9470314586016	0.509306290496296	0.365426490327481	1.3937311715959	0.163398799451615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03554356471794	4.46269513823243
Merged-chr3-109335684-2	6.16023128598868	0	1.37804270551869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100511809-6	24.1267305838842	0.805932140961666	0.407792042899121	1.9763312085053	0.048117277180838	0.575237974548752	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08585466505258	4.77501057763157
Merged-chr12-51707012-3	6.22547001612981	0	1.39412866981021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12172267-6	21.7925237893489	0.101226022597498	0.610084193416078	0.165921398537959	0.868218807308381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41384835242074	4.06060338072026
Merged-chr7-145106642-6	20.8908057035142	1.05054318032285	0.55242476445911	1.90169457980664	0.0572110948874411	0.646825687809154	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27643187026249	3.35786636970151
Merged-chr10-17215184-5	14.034323174811	1.07721804018448	0.794388569995519	1.35603416372236	0.175088298321572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	2.36206016777955
Merged-chr16-30969456-7	29.3149847708921	0.269109992336839	0.442189571861145	0.608585117021583	0.542799471860432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6697741097763	4.08217711013656
Merged-chr2-131222738-4	9.09624375125593	0	1.36505290245168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63050997-4	9.02249941610212	0	1.37137987344537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60837545-4	13.1747075557325	0	1.3643703267438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96660953-4	12.0827491986061	0	1.3582722624187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82816716-1	3.97370757919817	-1.89329471172967	1.32875537090692	-1.42486326165322	0.154196731219444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr5-149286146-2	4.36403888016957	0	1.38721922744746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145289179-4	12.3761495443487	-0.252613913905378	0.658965165637916	-0.383349419784327	0.701460701087896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51727611280032	3.17921410952778
Merged-chr9-116083754-4	15.4412237055345	-0.134526937105145	0.548656810004165	-0.245193233096157	0.806306815707445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35173293385949	2.87930835703338
Merged-chr3-135628607-8	21.9554856382757	-0.04803895708788	0.470584446227677	-0.10208360576507	0.918690313731432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30337819437485	4.21012760043857
Merged-chr18-70420500-8	27.3314738152519	-0.348671182563608	0.340069344323561	-1.02529436535115	0.305224313678151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07993938961894	4.72414717923184
Merged-chrX-98963915-4	7.67402190401999	0	1.35667340930128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91723588-4	5.19067786893862	0	1.37042364941812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23555981-4	6.56128539479855	0	1.35647426143463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-152172623-4	11.2019502322588	0	1.3674208508147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35678010-1	12.6622949052019	-1.16148193759391	0.52206957436041	-2.22476465711845	0.0260970411738531	0.387280660979929	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73995477947769	3.52823402123043
Merged-chr5-98320004-1	3.73437583989863	0	1.52036520690003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122732712-3	9.15780700316462	-2.69577518840043	1.16837695483897	-2.30728206101254	0.0210391009188033	0.331400894478479	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	0
Merged-chr2-31726934-4	6.92139272728424	0	1.35324970525942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54998795-3	4.00308911024461	0	1.43798305253187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46076684-4	15.092150906054	0	1.34845154452148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14640230-1	4.23198946637787	-0.541811635881109	1.12623467389463	-0.481082360932354	0.630457964033904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04937768295532	1.32551364848754
Merged-chr4-84077459-2	2.71223155004783	0	1.49732589445815	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35127958-4	10.1553152217445	0.294953997017254	0.988216210391324	0.298471117874555	0.765343616682328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.17858215524007
Merged-chr19-5622117-7	20.4676904272765	1.2229560079934	0.450678231022773	2.71359014882527	0.00665584559169592	0.150438715392515	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43728330824006	5.20730340950796
Merged-chr1-92251085-4	12.9873356839094	0.865749787559917	0.770572009471661	1.12351574793576	0.261218516143285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	2.16905656345163
Merged-chr2-163516665-3	7.06733675744732	0	1.38684371045323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122870551-8	23.4765958837772	0.0795291065873631	0.386084002420359	0.205989126948528	0.836799404618259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1615912614963	4.2581317377388
Merged-chr4-149076065-5	16.8647026770261	-0.819120251040571	0.592284942962317	-1.38298341157169	0.166669952346798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36192922285494	2.61186247420762
Merged-chr5-143602290-9	40.0811132596718	0.0715620851147131	0.259253557432234	0.276031256132016	0.782524059558171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.84065945115597	5.96014297933533
Merged-chr4-142095748-4	8.23823994830786	0	1.35391722671477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146010939-8	29.6433396247782	-0.241084146275364	0.450072110044048	-0.535656711214052	0.592195826601535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93608534958301	3.74794900762011
Merged-chr5-122689783-4	12.3047654911328	3.02026885391063	1.07878726295354	2.79968901898382	0.00511518591514371	0.125420113288812	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.7877231627864
Merged-chr14-121437350-6	17.1421004835875	-0.0410245329550585	0.628395399325767	-0.0652845851498522	0.947947415428532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61564587584303	2.58547360380807
Merged-chr2-84252264-8	21.439458817309	0.462380001993549	0.382158477147175	1.20991690527247	0.226310779625471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55235099185437	5.07918845892674
Merged-chr15-58797452-4	6.99738951213735	0	1.37577468866426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73210596-7	20.9819773062276	1.0838826290088	0.45772052683868	2.36800092076885	0.0178844913911547	0.298215664887049	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42684806903154	4.40374021547637
Merged-chr17-79442718-4	24.0162409878618	3.36012822958071	0.53089573661186	6.32916785323012	2.46486862203222e-10	7.97802840294363e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42441375874834	5.71969650139294
Merged-chr11-94118847-3	6.55973823316815	0	1.36245615507883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50403962-2	6.39428768228907	-1.27938504159702	1.35224368722678	-0.946120180616867	0.344087291761723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr7-115155034-1	5.04293642687213	0.571621586771128	0.779044762560025	0.733746780984341	0.463103081231619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17540470129796	2.55989011113458
Merged-chr6-129427473-2	2.55220142742538	0	1.51549398919769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65516658-2	2.60905018912567	0	2.05352900104633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92679021-2	6.25699329718287	0	1.3545719775941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135598621-2	5.40061868631193	0	1.37271511220484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-10108724-3	6.85113867347001	0	1.37267279003929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76889680-4	14.6112448483774	0	1.35027228174048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-108099067-3	6.2673486773158	0	1.38195693373672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96856171-3	10.0763605816688	0	1.3812231709568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43711307-6	17.804405124694	0.491165283528982	0.549449070931721	0.893923221484558	0.371362972325826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59548068020203	3.43795844656553
Merged-chr5-121564568-4	9.95751855770056	0.251746586903602	0.957800513633453	0.262838224995925	0.792675271766561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17347279658369	1.18984215491549
Merged-chr2-30128994-3	6.64903097650081	0	1.41294023329763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94473620-3	5.37686154684996	0	1.36439588374309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75781283-6	22.0730803906204	-0.141205916224498	0.35886824045227	-0.393475655707346	0.693968200927022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40887966320321	5.25089620273033
Merged-chr7-71875498-4	15.129807508178	-2.3304334546614	0.735380887621408	-3.16901553180039	0.00152956221101016	0.0502389560291851	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27478407599645	1.4965005622044
Merged-chr8-14627109-8	22.6193933898226	-0.477190629204418	0.408016647720741	-1.1695371545992	0.242187280803177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39989705271001	4.16800818989274
Merged-chrX-85330038-3	7.92380991622025	-0.556842927454309	0.797499767211543	-0.698235849524207	0.485029710268052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73249259224818	1.48914397899119
Merged-chr5-123139160-3	6.64479800865519	0	1.35152274686542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97740384-4	8.83807185432712	0.484955181366254	1.22666227941321	0.395345311831254	0.692588063288153	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.724326877898254
Merged-chr3-87337258-8	32.6586901315737	0.0988404833062396	0.417490146314312	0.236749260261166	0.812851316943022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54374939521368	3.73099401209519
Merged-chr8-14859686-5	11.1805596395809	0	1.34206984966416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80159289-3	8.22904097303106	0	1.35538745762867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86961999-2	5.18809219789911	0	1.35973282041279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8511255-5	27.1692864136438	1.81235756564541	0.593914905216502	3.05154416857874	0.00227667550025744	0.0689622765016501	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41272900099005	4.09292409621968
Merged-chr3-129422024-4	6.47805027263347	0	1.36292469478969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43470527-6	24.8858048511141	0.467776490754747	0.634004289767122	0.737812816576631	0.460628203869625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96739710961373	2.28636004977218
Merged-chr6-120189438-4	8.96048305818606	0	1.35279503269261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98027595-4	9.18960405931879	0	1.35724484193968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58132034-4	16.9089007272236	-1.45670857155374	0.492543174107402	-2.95752463567001	0.00310119966606015	0.0871655184319357	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3535296361535	2.85777533975142
Merged-chr15-80074980-9	48.7753792812511	0.440312862983567	0.264304035192294	1.66593318434665	0.0957267232112149	0.885268619775167	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25229299583304	5.71762852618863
Merged-chr6-146756939-5	20.7856863157527	0.701206551559361	0.514120492198822	1.36389535565952	0.172600502759662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86134483245017	4.05457480371131
Merged-chr5-114651528-2	8.78353955109768	0.309394860603457	0.907445613062044	0.34095140926347	0.733140162019373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	1.44790810950236
Merged-chr10-11323759-2	4.62477208461279	0	1.38816385299767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86712809-3	4.66855460014317	0	1.37364760951992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67555409-1	5.27090550163668	-2.19078731935271	0.802135711968008	-2.73119284762638	0.00631055332942826	0.144749250646719	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57425437479614	1.30064958020929
Merged-chr10-117033950-3	3.53804729355357	0	1.39717072273009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16568907-1	5.39490346187516	-0.502882605999796	1.00196043208911	-0.501898667746063	0.615738802480066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47190689055611	1.02748994520012
Merged-chr1-92799869-3	4.81095353143325	0	1.38940229940342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110266042-3	5.57060838676884	0	1.4034828267864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17402949-1	3.41240171105207	0	1.44617221614399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68180936-1	5.67903930180161	-0.457064660203718	0.965002470409529	-0.473640922400694	0.635755988339616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68011542396584	2.23130799852239
Merged-chr5-120515476-3	9.43519147622742	0	1.35298178128275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22058416-1	2.44688691735233	0	1.42463740405771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94301252-7	15.3646705861109	0	1.36366315325946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145951437-4	16.1270357074867	0.225243165520189	0.625221897567718	0.360261159112382	0.718651842423133	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41685582892305	1.93688050588922
Merged-chr2-167996542-4	7.06246570335799	0	1.35995215438019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23920040-3	10.6178346746473	-4.05470744536121	0.881681946124072	-4.59883233765413	4.24865529727486e-06	0.000438997479345365	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68192670461942	0.904676873936758
Merged-chr16-65582895-3	7.85161267182133	0	1.36647644161468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91305229-2	3.13640657090322	0	1.39871870591247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-14639583-4	7.2218533338373	0	1.37985546118554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15380733-2	4.74502279584849	0	1.36712151679233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64338105-4	7.63899774765045	0	1.34860310895731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114659624-4	9.65149928782318	0	1.3504870038462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67129374-2	4.25642277932418	0	1.37375559684295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69247502-4	6.3594666098883	0	1.35837968352111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12265246-3	10.1854727707084	-0.41398752384028	1.115213986477	-0.371218016327144	0.710475155219981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	0.577068348605183
Merged-chr2-5507764-3	5.57658194853323	0	1.36940059358876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33894677-3	5.62129670849214	0	1.36852951250806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150598967-3	6.68561512026321	0	1.35649418073894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37349219-3	9.20645942469464	-1.53991268643856	0.970545048587074	-1.58664730573854	0.112592546999417	0.978463546254724	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	0.724326877898254
Merged-chr16-92853806-3	4.34133251009133	0	1.4008555564295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80334349-3	9.91005626028583	0	1.35177123042922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40829147-4	8.22318882888679	0	1.35509734943389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165487026-4	10.7828459753815	0	1.37813669337857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12540173-4	7.8306516359005	0	1.36198741362932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4366141-1	3.43048201396767	0	1.39629889524307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132355983-3	6.5249073680951	0	1.36262269541635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111436649-7	19.1076927931045	0	1.33629423559348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121471702-10	45.5344894152586	-0.645031938834193	0.269822451127028	-2.39057919806133	0.0168218206407297	0.287264806584189	C57BL6J_F1_Control-BALBCJ_F1_Control	6.23193908057554	5.61630455144097
Merged-chr1-180392291-4	8.05561469879363	0	1.35753368886684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107620335-4	5.53645520957955	0	1.39438417542678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79798410-4	7.07733218959073	0	1.36555349939649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113220754-8	35.6413036321243	-0.762571773804956	0.373419858715418	-2.04212967255742	0.0411386702368482	0.517412534799822	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03697218541024	3.984146884169
Merged-chr1-191878187-6	33.0602853935779	0.334344062867166	0.434610966536316	0.769295044558496	0.441718178339305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15560894171928	3.7160578074509
Merged-chr1-156533636-7	23.2034599415984	-0.0525885465440198	0.388147508642597	-0.135485982450149	0.892227646450189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00744981258532	4.12479774497555
Merged-chr6-13672903-2	4.45577084774529	-0.0350312405339062	1.19639114268819	-0.0292807588454674	0.976640672539512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr6-134522302-2	6.87614978137714	-1.21349052880068	1.04304652470742	-1.1634097809214	0.244663283036106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9094343094868	0.723581231604105
Merged-chr12-92928363-3	7.11627502004813	0	1.35590522954484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37678132-4	6.72932934679103	0	1.35786411638187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154915562-7	22.0022757211575	1.05674859233664	0.508222162598276	2.07930442650126	0.0375893785378765	0.488493508044166	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06376574244281	5.16608943813052
Merged-chr8-125596387-6	23.9128608678733	0.118068613001427	0.467942280917037	0.252314479405548	0.800797997172738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57117019830609	3.47225388710431
Merged-chr5-105056672-3	4.24992504597324	0	1.44253462217175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133343772-1	2.7230403992812	2.670523847462	2.00656855464831	1.33089090889798	0.18322490902093	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.98656547140931
Merged-chr7-73617922-1	4.64732632495029	0	1.37218887490269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49220793-3	4.44977549959502	0	1.37416007996203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80325257-1	2.41998695778371	0	1.46782378367452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96418530-1	1.4782196423138	0	1.52491057555481	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43409333-2	5.60091752499356	0	1.38974414953595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17710991-1	7.34395698077373	0.509644193969757	0.67364517464827	0.756546937689946	0.44932134158741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21361753033067	3.49620582987043
Merged-chr9-47688828-4	10.4533528042528	0.196576525433349	0.560693206004137	0.350595518776266	0.725891818904211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62798987719808	2.63199695194963
Merged-chr2-146214969-2	8.32812850705586	-0.215239825477982	0.752194758753999	-0.286149063089092	0.774763954934188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92167370040339	3.50736506246827
Merged-chr6-89338864-4	14.2433000703671	0	1.35386521606299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34276853-3	10.9051134712678	0	1.35283978405053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91899737-3	7.97366695746176	0.628360392579674	0.731913447392573	0.858517349036551	0.390606854800638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16828781307614	3.44878679852317
Merged-chr12-79755247-2	4.64013957515078	0	1.36287162686796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83220795-1	1.89877971428583	0.0716155697371249	1.39252984390737	0.0514283913199124	0.958984161699896	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	1.27743081564928
Merged-chr14-105288098-1	3.03426113965451	0	1.39070782737604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116552966-1	1.89745128334705	0	1.55850073458577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45426567-2	4.87379027888998	-0.790684565646813	0.969624384034582	-0.815454498325212	0.414812199947304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56706844884727	0.88866493597531
Merged-chr10-26785424-1	1.91869970794671	0	1.62854147085108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115212732-2	4.06195161018667	0	1.40877399149228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40781380-1	2.97548449655708	0	1.40971552579369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27960689-1	3.12972049748976	0	1.43105331973425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34056671-3	5.76918031784623	0	1.35966420966129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99541733-6	17.9965139326313	1.21297987052139	0.630572384866768	1.92361717644466	0.0544025864490779	0.625042628500876	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42139546294927	3.4729492561398
Merged-chr19-45161269-7	22.9657624697981	0.139863934735314	0.336500265028171	0.415642866502956	0.677671354276465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18787539476854	5.41916708712315
Merged-chr2-3657015-4	6.73478562212253	0	1.38059999014254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31318655-4	4.64304471494844	0	1.37449297095931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79975284-2	5.62222000309679	0	1.3603907697296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88557229-3	9.39446515063256	0	1.3479935889113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177236916-5	15.7744104937598	-0.58434276750088	0.499205231103359	-1.17054616236562	0.241781248533181	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97797156769883	3.65182238377574
Merged-chr8-43351167-8	24.1178723239788	-0.0102244521758763	0.428189723899899	-0.0238783221669901	0.980949665757351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64240217750736	4.65761405396785
Merged-chrX-166718314-4	10.2766942663081	0	1.35771007476026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53446347-4	8.83592326385713	1.3349879578719	1.0946628371945	1.21954259568483	0.222638318995753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.4771514048608
Merged-chr3-22010807-2	5.44180199184455	0	1.42230318264647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156024653-2	7.85690672166548	-1.30602055380663	0.690207504600584	-1.8922143632188	0.0584624254148692	0.655905830418243	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30259447890216	3.0943072645766
Merged-chr12-81845194-4	13.6320111958814	0	1.36303959637647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113271372-4	7.02178223053178	0	1.36815410569668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46881193-3	4.81998812437617	0	1.38607299551865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-157613029-7	40.1894393250254	-4.26988154044056	0.622380591600931	-6.86056345275367	6.85894687954618e-12	3.27057450373027e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75876941924862	1.55482458121103
Merged-chr8-68837858-4	13.8339211460627	1.68189387562783	0.441733507658337	3.80748538761228	0.000140387031519925	0.00777117988430917	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44262256427606	5.09251005954481
Merged-chr12-52308745-7	26.8253490522499	0.0870415996758892	0.401802696328675	0.216627714226908	0.828498485728199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45354405113601	4.46408324433486
Merged-chr8-8459094-3	12.9920504689276	0	1.36440972996329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13560361-6	15.3866831280123	0	1.34000326918049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-195012760-4	7.06552081057227	0	1.35457220208965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127929433-2	5.41244016646406	2.55018028449116	1.23141262919044	2.07093887462215	0.0383645086806999	0.494652829073568	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.788686275880602
Merged-chr13-91697122-2	7.48145208616007	0	1.36206617637466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130501794-7	24.1026449117303	-0.146253553291249	0.379443941052359	-0.385441793814459	0.699910122999671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29876595185372	4.07870925879816
Merged-chr10-60933019-3	7.62982138023295	0	1.35364560856763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31163464-3	9.12030203968269	0	1.35035590317289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44686858-4	6.58566211779623	0	1.36349656696516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149436571-4	6.87079921057085	0	1.34767959576253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60712297-4	7.58500932048102	0	1.36280056879695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46173142-3	7.23836629088591	0	1.39666639813816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11323368-3	4.22642980464132	0	1.43139666251214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29842421-2	4.98783271695701	0	1.37347502674162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120833307-2	4.24280497245095	0	1.41460635456497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24591965-6	11.6169327014478	1.87151092979422	0.860109883693765	2.17589748156011	0.0295629271707921	0.419256759216564	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.78532922761226
Merged-chr2-152739507-7	37.6795267928729	0	1.34055351609845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98061258-4	5.8415309771701	0	1.37318591475876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120437477-3	6.51014485221859	0	1.38463401281657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105484524-6	42.0590227311124	-0.276307690800667	0.318154808479199	-0.868469321967617	0.385137459601648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09759981935381	4.71638890911873
Merged-chr18-52750165-5	13.4394303150845	0	1.34559400429232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68062399-5	16.3406098779405	-0.519819769272722	1.16772151709461	-0.445157309909024	0.656206075095913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	0.790093605168944
Merged-chr8-70562928-4	9.69954155950811	-0.70294157236803	1.08111751869235	-0.650199039618064	0.515563661338822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0.67591700901439
Merged-chr7-104398782-6	27.8494802731375	-1.0641084331185	0.479334143739617	-2.21997211551977	0.0264206605141799	0.390696595454381	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29927497354275	2.6906450073362
Merged-chr5-86190948-8	28.0854168542428	1.43672112921081	0.357040714101095	4.0239700192959	5.72252053130471e-05	0.00370763401145641	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24705556894958	5.81146266759664
Merged-chr11-11785704-8	28.6618748109909	-0.201823853585531	0.394612060826944	-0.511448771136369	0.609036851504403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47445271439115	4.23165655955092
Merged-chr5-62521262-3	5.84250240521476	0	1.39194974660103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5072109-4	8.42869800817045	0	1.36357240968229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86190533-7	83.1523166695084	2.16138944602449	0.415563325687	5.20110729803053	1.98104685324479e-07	3.07679216844381e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33230045444271	7.65589073560269
Merged-chr18-57085756-4	9.70270880262234	-0.64281619786526	1.31660972602905	-0.488235948099839	0.625382724611824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.413263464506793
Merged-chr10-8974139-4	5.49727760635248	0	1.38105209666459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14985439-4	5.91108865368402	0	1.3525822845572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101733052-8	65.5152729142407	-1.0599771163282	0.389832168779435	-2.71906015259589	0.00654677012235744	0.148575911737095	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47530024791399	3.45366927771582
Merged-chr2-90515093-6	27.0149363061743	-0.141010009179509	0.419949810071992	-0.335778242536497	0.737038098489873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84976498532322	3.77714703747635
Merged-chr1-166802142-4	5.94801438938989	0	1.36950472074889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77301954-2	3.70253937342827	0	1.40446066204002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84428776-1	3.04409117491192	0	1.41425327635159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52094689-2	4.55485034225495	-1.36401480339394	1.49265635250113	-0.913817035721824	0.360812993365789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr17-73990111-2	3.62853316131579	0	1.41133116987013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73307936-2	2.95952744384807	0	1.68821677958328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108825247-5	15.7550766365365	-0.0391340840644586	0.722894184040236	-0.0541352869181203	0.956827378560736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03221224808718	2.00681596193648
Merged-chr13-95973597-6	20.4549349692287	0.23081875712976	0.382197371635639	0.60392554805376	0.54589314238747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0241483927446	5.13843902097671
Merged-chr17-50470628-8	28.849029365846	0.0482636113248469	0.370743691676337	0.130180532827465	0.89642359605867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43792894769659	4.46842505589057
Merged-chr19-42110689-5	21.3597336085085	-0.867265685548022	0.380554405760156	-2.27895321252598	0.0226698467079474	0.351486080204596	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16434171546894	3.92018430614237
Merged-chr4-72396611-4	7.6750012668632	0	1.39137526234678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45389409-4	12.0166224601277	1.86287040930375	0.782774539216488	2.37983009918588	0.0173206219401582	0.292490605302428	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42436654726916	3.13269633209948
Merged-chr2-122581894-6	20.4571430349012	-0.0380121028863683	0.586665724618629	-0.0647934612356613	0.948338447690142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04508027146955	3.02088145951224
Merged-chr9-64704701-4	9.82842067794295	0	1.35736499026343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19416250-6	24.707917287597	0.744790655799611	0.432470392248728	1.72217721524681	0.0850374209623951	0.823103483991245	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16468797403696	4.0201562380704
Merged-chr12-25190587-4	7.8959560067915	0	1.40433928167663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135981149-3	5.4645503542706	0	1.37186260528592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-106016459-4	6.86091759098626	0	1.35152488797302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68282551-9	39.9385692449481	1.10212155520365	0.297708672330611	3.70201360469516	0.000213895145781674	0.0110209727294275	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44375468384325	5.51269350372028
Merged-chr7-102513249-9	34.6798236845921	0.878446838884786	0.32102923626841	2.73634529083925	0.00621257998583802	0.143323371454419	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55956920487691	5.54929633008632
Merged-chr18-43477824-3	5.89487881003491	0	1.37304997191156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105291597-7	31.6777834267921	0.430003961816713	0.623754460810222	0.689380178954011	0.490584053403097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38797369567447	2.7087832243138
Merged-chr16-4474655-4	8.22258342158737	0	1.35670612078567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36866886-5	21.6356310914066	-0.477290674240063	0.464129180765648	-1.02835739276876	0.303781742943005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15582809494217	4.91099716855358
Merged-chr6-50978778-2	4.16268742479646	0	1.41190359692656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129549981-6	26.3365250567156	-1.09693108701388	0.4972165259305	-2.20614366137784	0.0273739424841526	0.39882332187484	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78120281922428	3.17480277640951
Merged-chr7-3709978-4	13.9859059671698	0	1.34967234024984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120452421-4	6.27062008051502	0	1.37099298560834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12886610-8	18.9263793593998	0	1.34397835113498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93576122-1	5.47870587181704	0.948424698135075	0.908738860535743	1.04367133323201	0.296637477216996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	2.51592963399167
Merged-chr6-16855218-1	3.01549978753452	0	1.40905031828529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37479251-4	6.92862178867165	0	1.36260930670908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139598849-14	115.012621847822	0.53129762115369	0.242755352540166	2.18861341508745	0.0286249499461417	0.411524908928344	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00493135974929	6.55594137541708
Merged-chr11-11682783-3	7.46191797246777	0	1.35509952642912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126600715-3	5.92886639173226	0	1.36538093755693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11288649-3	6.38590473923707	0	1.36875942899757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124579484-2	4.30389290850205	0	1.38712811655598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120816518-4	8.88075422668772	0	1.36762973453131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166875072-4	12.3691456030752	0	1.34541767737441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121718013-2	3.63770510848382	0	1.43429766693579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76538148-1	3.49415347092808	0	1.3820767254968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48976486-4	12.8414799988274	0	1.34837428851575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76736143-6	18.0082056772746	-0.529057373558427	0.67391932716357	-0.785045556988482	0.432426858480961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65211902171377	2.65264322048096
Merged-chr4-148901872-3	12.9378130046422	-0.77429992764902	0.813915124115169	-0.951327607397373	0.341438096670803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14251121140159	1.30139522650344
Merged-chr18-77704481-8	29.4541013906389	-0.711546600380636	0.359448488710707	-1.97955095856115	0.0477540082364922	0.571901329307663	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05767610338527	4.41108955078882
Merged-chr15-67542602-4	11.9296464109021	-0.475089921273731	0.670144874721207	-0.708936140817874	0.47836410623709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45362829364608	1.73709028346892
Merged-chr15-53416439-3	7.97012614160675	0	1.36672835508025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70943641-3	4.62361206746831	0	1.37117712473231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85525915-3	5.85221218890426	0	1.37329654521826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8823324-4	7.87363962595518	0	1.36684818482735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34071447-4	10.3556634493026	-1.1464495421225	1.00654797852972	-1.13899145055871	0.254706720106165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	0.879366456215217
Merged-chr17-27977251-3	9.38862716481501	-1.92405517200258	0.978749076284183	-1.96583089437719	0.0493181478120499	0.584452844324225	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26028312783496	0.723581231604105
Merged-chr19-46934259-1	3.19236394063796	0	1.40336758777204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167922040-4	8.14930825814204	0	1.36969298550548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36345505-3	5.98147209940855	0	1.37376236147243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16160638-3	6.44101936820569	0	1.3921607662722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117308072-4	8.08380038696704	0	1.36134829171364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96400053-4	7.50709418458526	0	1.3706525708025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102144022-4	6.9792875429441	0	1.36158471341391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4893691-4	6.08256791457207	0	1.35107491422193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4494235-4	12.571425878448	0	1.34641669158518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134205326-4	9.08668767558867	0	1.36380401963294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14905053-6	20.8741232908458	-0.0498745685669915	0.970436074984674	-0.0513939762263879	0.959011584706709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.662147012823607
Merged-chr3-104481522-3	6.80635392972076	0	1.39908205733015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38382717-4	10.8183900996012	0	1.35704897097602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88336239-3	23.4237730783493	-0.40929310831085	0.436075845654916	-0.938582387419685	0.347945199002223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07074162128046	3.70429066951814
Merged-chr2-124202771-4	9.11900865771493	0	1.36377565513954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54391085-3	9.04897739603378	-0.878013064601196	0.849279862710417	-1.03383243045358	0.301214507731564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28300009677801	1.5645819449897
Merged-chr13-83064942-5	14.721234661516	0.025889813020237	0.525391331129629	0.0492771987017221	0.960698390238209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13634941273677	3.39893916195482
Merged-chr2-83744549-7	30.8174417182825	-1.63575516724181	0.482176195560411	-3.39244280887955	0.000692723914369257	0.0274066567529742	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18064213525916	2.28015692214866
Merged-chr17-50330376-8	32.2293746223458	-1.03253619472236	0.421895404888731	-2.44737482977488	0.014390109872024	0.259705173483849	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86754218575053	3.58247774883107
Merged-chr3-116109476-3	8.62273348772649	0.0343180667610421	0.979561453149822	0.0350341131234706	0.972052539222315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72942046393685	1.11620188329962
Merged-chr12-104174562-3	17.7540599721767	0.232111121357339	0.436903625970343	0.531263893362824	0.595235922394589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81330100897291	4.83384193194155
Merged-chr18-36708443-5	22.8074038537332	-0.452370435241327	0.527202407784535	-0.858058363470542	0.390860236839781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0453125110699	3.17567657281976
Merged-chr1-39784752-5	17.3051251644384	0	1.35114477510444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13256387-8	50.0040639811421	1.48570552176783	0.321880295660815	4.61570820518137	3.91757061515947e-06	0.000410318345027849	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97445709924172	6.47656731241625
Merged-chr2-27306910-1	2.53142485186831	0	1.40458266947929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-23839819-3	4.69910926299354	0	1.41493888867384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40416359-1	7.64290593633009	-0.037680779764999	0.587935209344774	-0.0640900207473413	0.948898547800972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6600238962148	3.47943771466084
Merged-chr6-93066434-1	0.928831079430223	0	2.43393754893859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91855093-2	3.58221864682885	0	1.43118548446583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-21086450-2	4.47819308910885	0	1.41294888250595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62329233-2	3.62949883095258	0	1.43281684902018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88910232-1	2.27450813909194	0	1.70080381236619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-111955698-1	1.51725719784681	0	1.6778096044611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96804503-4	7.1600998825993	-1.30188456781631	1.0975091304871	-1.18621752808425	0.235536405898865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	0.67591700901439
Merged-chr16-85455380-1	1.83768844005188	0	1.56002592651333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21157802-2	3.83544866786677	0	1.45633050745945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167335917-1	2.34214634999014	0	1.44519859928522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19547021-4	8.76859875108882	0	1.35362934576633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128361821-2	3.20871866404858	0	1.42154121153776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32638341-1	2.25231923154486	0	1.4467106272973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-68859036-1	1.66431573133788	0	1.5677243665393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40680716-4	5.80023529660698	0	1.37771085843876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98951755-3	6.27844260399693	0	1.36258642346235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112213682-1	1.60750792416177	0	1.49787687330212	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60288015-2	4.63841377501594	0	1.40401019266796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16205024-2	3.94012251034565	0.699471548737317	1.02050840601964	0.685414784054075	0.493082217496723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	1.71465869101023
Merged-chr16-24760921-1	1.60140685484598	0	1.61765834059972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8849650-3	6.71407931748985	0	1.36112585833379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148978212-6	18.0516374553484	0.288580747300473	0.584230196081991	0.493950414127471	0.621341199118735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46548184580302	3.23580712014897
Merged-chr1-136124441-4	6.61520941463614	0	1.37598190362828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11917550-7	23.7919307428407	0.344035025398301	0.414633337756383	0.82973314991965	0.406689674454298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01754593552866	5.52095437567433
Merged-chr11-62103671-4	7.92317084379125	0	1.36542147783226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95773680-3	4.33967933860668	0	1.37664087842564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87648995-5	12.9379430128161	0	1.34428729833773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141958002-4	13.394730766182	0	1.34546902034284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102060420-4	9.04376478487798	0	1.36577124105393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104001681-4	6.56093557225203	0	1.35688039367717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41185533-7	39.0166369230884	1.76061676098643	0.343115305390197	5.13126850748971	2.87796019024593e-07	4.28611062963228e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05731840505513	5.95333322635208
Merged-chr5-125383051-5	19.3352130639906	0.576559440003668	0.704325843231256	0.818597593066541	0.413016040703457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72081599314607	3.22253447266564
Merged-chr1-156800276-2	10.096161641124	-2.30259978434612	0.557823382909422	-4.12782944367897	3.66203563971528e-05	0.00255211019665747	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8756034975183	2.14883028460928
Merged-chr7-82881577-4	13.1312681360092	2.10099693609135	0.597896987660808	3.51397812574909	0.000441449163601053	0.019653345687297	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11197723984608	4.21181490276081
Merged-chr10-127542098-2	9.0759687359783	-0.604402345361611	0.751645146505677	-0.80410596432561	0.421335780312785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56218510218452	4.20488666167662
Merged-chr1-174056082-1	4.18218933938578	2.44387793585168	1.27600489369178	1.91525749464875	0.0554596734201307	0.633879812330716	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18909650862134
Merged-chr1-37419582-4	8.13923916917015	0	1.36110339530823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174086535-4	7.24118377795157	0	1.35578884155646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85123801-4	8.11453104489564	0	1.3557366648034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6749372-5	20.7207734628494	0	1.34990312564107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104732386-7	49.604480341273	1.47992191094895	0.428879908306889	3.4506673833039	0.000559202284764186	0.0233828284596126	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9791255453587	4.30192924469561
Merged-chr2-50786625-4	7.30274846785914	0	1.37672836831427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92985998-4	10.4352520634891	0	1.34743954158954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94525150-4	7.7702188226969	0	1.35598273780239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158772999-4	7.10249998071991	0	1.35438009951779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152427918-4	7.93389253918264	0	1.37334997920727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23915587-8	33.4635439503461	1.56704146440352	0.388521795782497	4.03334248274912	5.49890454557263e-05	0.00358841479223029	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58691781761636	6.3081890356279
Merged-chr7-83720482-6	24.4667752960255	0.363145088687856	0.375536573667786	0.967003253880428	0.333542407032712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32058525457942	4.66148028644876
Merged-chr6-137273204-1	4.84770558487976	-0.817256890544732	0.909793436746921	-0.898288399910792	0.369031815248564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40500539984967	1.66569775432524
Merged-chr7-43668309-4	5.97978659433565	0	1.39201103660381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46915830-6	21.120970919601	0.253039501059737	0.433496732481068	0.583717204998283	0.559410589907448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74441155505258	4.05369082125248
Merged-chr10-25355181-4	15.622495859518	0.0106620599599371	0.933669583751256	0.0114195215796787	0.990888738066653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.14046671619316
Merged-chr8-107002704-2	4.27211415576517	0	1.44622837248306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146134515-5	16.6161714174062	-1.15858613412761	0.452024761361792	-2.56310324823178	0.01037411930703	0.206490937902176	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38299765683662	4.08731021430196
Merged-chr9-47651673-9	52.5049262562495	-0.342780018518715	0.225737445518711	-1.51848984439005	0.128890957751531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10786312698319	5.77705593301425
Merged-chr7-114301702-1	2.50140345335896	0	1.40646483710807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84180937-5	13.6862046886334	0	1.35163338219063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64531350-4	9.53127692679062	0	1.35971255046349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54939923-4	6.75950459830541	0	1.39662592451968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73596602-4	9.07381049485152	-0.0239848727030749	1.11509287054457	-0.0215093050423339	0.982839380830649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.723581231604105
Merged-chr6-134120476-7	25.0686716984947	0.64159285316127	0.62462262711402	1.02716876608467	0.304341002701604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09716266770032	2.89196749386217
Merged-chr18-50078277-3	12.0835557888927	0	1.35415103321037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80501069-5	12.4797334575723	-0.0431123830413951	0.699692182849353	-0.0616162136696008	0.95086846483516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98859768019381	2.0151870972395
Merged-chr18-79993620-9	34.6944476157763	-0.599613533836076	0.286831090221484	-2.09047608253718	0.0365750546968312	0.480353563243548	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89351988701386	5.362330956097
Merged-chr8-35408012-4	18.3757675817731	-2.03232395453691	0.441748578646692	-4.60063496019157	4.2120501200803e-06	0.000436119680909419	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64121903265922	3.75537448843653
Merged-chr1-191070932-12	45.9092338339711	-0.209462147128446	0.285895486054969	-0.73265286562857	0.463770178751878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.428313671254	5.29285787273694
Merged-chr9-40583747-3	9.08651074716193	0.402641271668893	0.703443626441657	0.572385983089559	0.567060509820132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67839755093979	3.0892787397161
Merged-chr9-71140334-4	6.30101750213784	0	1.37251549110564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55935281-4	7.76227331035045	0	1.35805206904223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30070511-7	18.9126507079965	0	1.33684946673647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19053815-8	34.6912071136235	0.262395271888484	0.362921392923614	0.7230085550336	0.469674628251851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35801460953888	4.52309125351061
Merged-chr18-47327223-1	3.21376355179157	0	1.50267397536229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34807039-1	3.25369823927027	0	1.37968088934438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4583250-2	3.60915162275223	0	1.42955563016518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146709272-2	2.23320356560855	0	1.65336118031858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110999638-4	7.28964558586155	0	1.35282611838303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57603108-2	5.81264376566522	0	1.35944430469881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71704154-1	6.41077067540043	-0.0350210043559314	1.01923180399674	-0.0343601958049217	0.972589923861826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.97908007631626
Merged-chr2-38483885-2	4.39281748008599	0	1.38952125745591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-4236-1	1.52098596202961	0	2.22357976676175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53839932-4	13.1577717976912	-0.852372536818572	0.759200456149353	-1.12272395243515	0.261554751945933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63900399389441	1.62267797289389
Merged-chr17-25129434-3	15.8945069460527	0.283947050660028	0.605160564674338	0.469209441650963	0.63891993737795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54316513336932	3.37419003484934
Merged-chr13-112106059-2	1.99318448317726	0	1.63231214816712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35739762-8	30.3741673425067	-0.625953597372764	0.397043261253677	-1.57653751733827	0.114901979598711	0.990276964014969	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44628707238104	4.36745256772951
Merged-chr17-55963313-4	13.5401590733717	0	1.35694488944018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120972136-8	21.639720136588	-0.340778408733403	0.437675952681313	-0.77860893806413	0.436210112323652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39121649776372	3.79112361430925
Merged-chr11-97718285-9	26.5454825951794	-0.941525575928206	0.463302470169201	-2.03220495583448	0.0421329114097952	0.525781205538351	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06730895862708	2.70694800985952
Merged-chr1-166459076-3	7.96071074432326	0	1.38991119098993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13526423-5	13.197848142908	-0.0268710084375782	1.26958690440205	-0.0211651587964621	0.983113907305562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.679405493272835
Merged-chr10-93946594-2	8.78477204391386	1.79167423403771	1.1252892662798	1.59218992638309	0.111342036006773	0.971499475969849	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.41437199749648
Merged-chr10-117435108-8	30.4071570855195	0.155549714022085	0.333007011453749	0.467106423204212	0.640423738895247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97900542035213	5.11029427656539
Merged-chr10-89697737-5	19.2997795796234	-0.853874983394662	0.504684670222925	-1.69189799844227	0.0906654237018225	0.855490672974721	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79043338640697	3.76891209616977
Merged-chr2-163580426-2	5.55647238475052	0	1.37682822838425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25768887-2	5.20350754936883	0	1.38891609681701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117724487-2	5.47860414664327	0	1.37902487709364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98504647-3	6.56092331854918	0	1.35505302003234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24142054-4	8.74281394678923	0	1.34756080029363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32716258-5	10.7937162511746	2.32039523291394	0.905107710409397	2.56366751296857	0.010357270835381	0.206231093531309	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	3.11057212703102
Merged-chr7-127303219-1	3.11034147538194	0	1.41750215663653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137062015-3	5.81275787748411	0	1.37805586516189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29841030-3	6.28430713683434	0	1.35647181543298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17652896-3	5.98208709172179	0	1.46741004261379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53673680-3	6.06318198841626	0	1.380894512835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71507729-8	31.0973812849266	1.00142760141276	0.390085979468279	2.56719711581993	0.0102524313256973	0.204593213815559	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36852354670991	5.40809219581496
Merged-chr8-116974800-7	23.8119971631862	0	1.34524151860192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43709756-10	42.0331299262428	1.50338631486241	0.37114257934263	4.05069749077355	5.10651899040242e-05	0.00336875322571948	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65436490062572	5.11748250649716
Merged-chr4-36183943-4	8.07442788185946	0	1.3496733034243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131511276-4	8.05843658286404	-0.0346854721415339	0.834366662166309	-0.0415710187311155	0.966840676964354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65117231954624	1.63175807346403
Merged-chr2-180115867-3	9.03192184441555	0	1.36993587558589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58096323-8	23.1301869446277	-0.382133976616525	0.381857743868302	-1.00072339176738	0.316960555225004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38258916733551	3.70605433065098
Merged-chr11-84619847-2	5.55736586272081	0	1.38516015424716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113165285-2	7.3268372050742	-4.38658218019228	1.1307926197626	-3.87921012529532	0.00010479620150226	0.0061198595582333	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71791299819427	0
Merged-chr11-70586403-2	4.48463110716022	0	1.39335986553422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101142018-2	5.44096718832276	0	1.95673615184229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-37043953-4	8.18616032000028	0	1.36150942178189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83844957-2	9.76651686612071	0	1.38337100912008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65550694-2	5.66178014760663	-0.571493685492332	0.90498054701947	-0.631498309410663	0.527714754282656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	0.730937814817307
Merged-chr10-117944105-4	12.1310776951458	0	1.35535327001244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70554011-2	4.40462054689883	0	1.44269723841479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83885192-4	6.67658720764313	0	1.4061874790237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72330486-4	7.04294447203161	0	1.40648362057551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174236196-4	10.9698242700129	-0.292077693023011	0.60502931766753	-0.482749652775521	0.629273503175875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92117589363366	2.82339149811831
Merged-chr10-14048631-5	23.3525953898101	0.873088885998538	0.977819246228784	0.892893946775781	0.371913969045811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.44790810950236
Merged-chr2-30783559-3	5.55523833220109	0	1.35119938689312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97954395-4	13.5485458388626	0	1.35665977850437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65319464-2	5.68089656380537	0	1.35716339485385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83010196-2	3.52560477650352	0	1.43381796444115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83732979-4	8.49859585320973	0	1.36916817718292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71981406-4	9.80945361618465	0	1.35559940315666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100463893-6	16.5340187765313	0.744767316050302	0.540626482746661	1.37760050574382	0.168326664718689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36090915273018	4.07323824954335
Merged-chr4-99168916-3	14.3417415374046	-0.375690363920939	0.698543944555251	-0.537819226477059	0.590701857054676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30811930973386	2.02930922537333
Merged-chr12-73594613-4	7.77350017223365	0	1.38317011062682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73889757-4	7.47613708892894	0	1.36330340286066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88939159-2	5.28973732810357	0	1.44222775737032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152608951-2	4.40615150214734	0	1.37709866687801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63712820-4	6.07794311638831	0	1.35962665059573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91936572-4	5.300013314605	0	1.36522650321485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48593056-2	4.94228630538922	0	1.3594728048575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-139379368-4	6.01579053289988	0	1.40541788150992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30767060-4	6.22304186149039	0	1.37563274229235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89003897-6	33.6956569256461	-0.266029905511096	0.307082249834262	-0.866314824952198	0.386317538604381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.341206139342	4.95834961681964
Merged-chr9-48817046-7	29.0500756182374	0.612600419148749	0.314104645740971	1.95030677659551	0.0511395654563041	0.598470535767327	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2368632405227	5.81207497113961
Merged-chr8-122548047-8	29.6379002445617	0.811880388061238	0.310066618789063	2.61840630001373	0.00883415495118154	0.1847061916165	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53269739591987	5.32774005841188
Merged-chr4-133651674-8	32.6925519655771	-1.29964764581879	0.36377943289572	-3.57262541060518	0.000353420135282454	0.0165331885833209	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0213732369209	4.7860112714226
Merged-chr3-127625429-7	20.9342643033041	-0.0484646347828133	0.414379051643179	-0.116957251073942	0.906893929614756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98932874103606	3.85403180837129
Merged-chrX-163306315-2	3.87408766062388	0	1.3838135069529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160276458-1	9.00354434742071	0	1.35561546124056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58466830-2	6.48043228905867	0	1.37630031662137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34541227-1	1.13410705444759	0	1.94068725230754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-28972709-1	2.97116037761312	0	1.47492022560533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81399336-1	1.16565856387041	0	1.81399032390935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136677213-2	2.15134134776801	0	1.51697854701082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84217373-1	4.44989230082656	-3.32857664425877	1.22776238953744	-2.71109187952304	0.00670620406554568	0.151388100830148	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9699838995169	0
Merged-chr1-62763969-2	1.5579947806527	0	1.72670988709479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32245496-2	4.88006374814919	0	1.38240947199076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51917311-2	8.73831521119103	-0.0384298109125468	0.625608348762885	-0.0614279061149682	0.95101842845331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44063292076442	2.41551551029609
Merged-chr9-71092282-1	7.17894202763771	1.51779497149678	0.727892347845882	2.08519154788278	0.0370519168109326	0.483927233523662	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09145770840793	3.79417195670958
Merged-chr16-32159170-4	5.74830490955269	0	1.35239931609472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18443580-1	3.2216139284059	0	1.38331928256219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84962146-1	1.42297486558416	0	1.70921163962877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29621392-3	5.66672621850841	0	1.36367184478587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41445309-1	4.35026424398916	-2.49358536937535	1.15547632566133	-2.15805838163597	0.0309232929874114	0.431033315502255	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	0.41385117919798
Merged-chr12-85703645-4	11.9027160331442	0	1.37989298453456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53799470-1	3.66004251203408	0	1.45838269047589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83659984-1	9.87635567674697	-1.81956454845837	0.669859477757054	-2.71633769302028	0.00660085517781134	0.149382134309179	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12169109280542	2.89812439937733
Merged-chr10-39261734-1	2.81584884481944	0	1.41767938013507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104224983-11	48.7789019156488	-0.213439252845845	0.262512345010303	-0.813063678348034	0.416181549748364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62191344045489	5.37674871149408
Merged-chr14-56875905-6	12.3689252158854	0	1.35676552067211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38020381-7	26.1893540389872	-0.394731110997908	0.36466432971137	-1.08245056847303	0.279052368771304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20009127124677	4.83930118659573
Merged-chr9-99498097-4	8.59306125351889	0	1.36702869741377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77810841-4	12.6710437264378	0	1.3419737395901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26587749-5	13.8263114973215	-0.593228667669968	0.552932290757947	-1.07287759746638	0.283326038728772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67244103178494	3.19580921632487
Merged-chr5-38494016-3	13.2403774587915	1.02717391821909	0.767877954179205	1.33767861497867	0.181001225023178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	2.28186675152058
Merged-chr7-101369146-6	33.3176278405515	-0.558631283812937	0.319121935882413	-1.75052611870209	0.0800275712898626	0.793980374298403	C57BL6J_F1_Control-BALBCJ_F1_Control	5.81334663431999	5.25119055527483
Merged-chr9-48745153-6	26.7782152734931	3.00593340260246	0.543640258315429	5.52926932217438	3.21567338963731e-08	6.40295933286793e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78035432918822	5.8437917880851
Merged-chr6-108759528-5	13.8112927686065	-0.64037836760643	0.62248457437214	-1.02874576169592	0.303599159880725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71716125803294	2.87561786971305
Merged-chr1-152511439-3	7.286534384025	0	1.37909505234845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63925462-6	17.2330802343414	-0.234690952995065	0.514286793822616	-0.456342561804169	0.648143662375103	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05530521385416	2.96460623990218
Merged-chr11-46846095-4	15.6229748028451	-1.66971941451521	0.465396001086278	-3.58773906655391	0.000333557851012618	0.0158912105374189	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70498921438658	2.80191598151426
Merged-chr7-84784373-2	11.0892264247943	0.328857528457382	0.699457608485185	0.470160770957354	0.638240158990097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06179571767529	2.21028622574614
Merged-chr3-126923765-2	4.44229248838289	0	1.39320575464668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107677007-3	5.33016210435009	0	1.3998379695545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31056783-10	26.9308656088134	0	1.33912107076051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138133613-7	31.0976989306113	-2.35260391679366	0.413524185039002	-5.68915676980724	1.27668222719896e-08	2.84422824542246e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46126078860037	3.22704777696034
Merged-chr18-9504264-9	52.0261225510985	-0.55197815944297	0.301812298697418	-1.82887894835709	0.0674177445566343	0.716613448641784	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31143278622551	4.74814933795825
Merged-chr14-121346648-5	11.6002710410998	0	1.35843790098428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144696858-4	11.2309763396735	0	1.36091821230675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35100481-1	3.35762635440929	0	1.43487177399326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53108423-2	6.67197502699204	0	1.36273916397667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13370048-2	5.44520065993202	0	1.37704621120495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47446987-6	26.5463065628531	-0.722386639719865	0.424676039074148	-1.7010298986841	0.0889373729972599	0.845424662481718	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7635381279284	3.60807618434971
Merged-chr6-50144842-3	4.96188790985191	0	1.3717240174486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64052212-4	6.21002694701569	0	1.35717867780248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58269089-3	4.99758942404328	0	1.37570798628306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35747019-5	22.3038272040151	-0.119986752541359	0.387040601452267	-0.310010763964143	0.756552770883921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57936894082776	4.3974614099894
Merged-chr9-96559272-4	10.0910044007937	0	1.3429645636937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31077500-3	6.74250939157828	0	1.35389330820898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59867435-3	6.29967720831057	0	1.36602393553644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136309964-1	7.56367079227362	0.288803937427529	0.727825147064404	0.396804010678094	0.691511992937198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83247173307855	2.6906450073362
Merged-chr9-111039185-4	6.79594032254604	0	1.35104962830555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33128368-4	4.89238470888003	0	1.39150500541231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114884133-4	7.27425123102615	0	1.35390167668392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31954422-4	8.32374116327224	0	1.34963839255437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117377913-1	9.5598769238949	-0.250174059633329	0.632236907933556	-0.395696702444997	0.692328788443884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63442641196814	3.33339468345992
Merged-chr3-58122896-4	5.43260158815498	0	1.37188076751073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32431247-3	8.67595108027195	0	1.43749364950466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111570689-3	5.3731096868132	0	1.4502037378919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-56131760-1	3.53568723842414	0	1.41208228833646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131052704-7	25.8377956989696	0.480544697234523	0.427546333467726	1.12395934573205	0.261030273102115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33192050229581	4.08885504227826
Merged-chr10-43849676-3	7.94173867563984	0	1.35580396533063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35267230-5	22.4562787710572	-1.43339705187291	0.463299133926496	-3.09389106714868	0.00197550006352814	0.0616807627532029	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74292664769243	3.49362377564345
Merged-chr17-33702349-6	17.3421449722906	-0.0954810134250613	0.583740714040366	-0.163567507162878	0.870071625669596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41742058901694	1.96748130499275
Merged-chr14-30695809-4	6.97019887051911	-1.86220504305332	1.24909992919642	-1.49083752190373	0.136004157926926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr12-76538086-3	5.57605153741177	0	1.38932994015915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62027865-4	10.8604905979537	0	1.35786846612012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193858961-3	8.79196986732067	0	1.35966409018349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12252404-7	21.5154475087453	0	1.33553328619246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-76001395-1	2.87048606388179	0	1.46311505391086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12376370-4	13.0391799089573	0	1.36074775376711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126986850-4	7.97372235601562	0	1.36711632198713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72379616-3	7.44349579141477	0	1.35678686102232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95019510-4	8.68348650330895	0	1.35715433454686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65774076-2	2.95799043677578	0	1.40570483644495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70698484-1	2.35340502780915	0	1.46125753820158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154842405-1	3.54281495997537	0	1.44379025018105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62869811-1	1.60311857124463	0	1.77487339913116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34449533-3	5.42419484306201	0	1.37239127432945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162165902-2	4.30622962379613	-3.50922708102721	1.12533623137085	-3.11838096312991	0.00181847582559532	0.0578750160442248	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98485448024296	0
Merged-chrX-60231137-2	4.8292589351227	0	1.38530305760721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52966413-4	9.17637674200099	0	1.36344607880852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95924448-7	18.7132347344815	0.750617870431563	0.544496226998151	1.37855476900139	0.168032070382367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15476068525901	3.70357845660476
Merged-chr9-32709915-6	24.8018912644027	1.04265916114998	0.763541974152286	1.36555578664497	0.172078431922739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	2.74237610359616
Merged-chr4-120955847-4	7.17744027774028	0	1.36312767678061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6715906-3	5.89587017880609	0	1.38721884204005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29762713-3	4.75822675299968	1.82026997793529	1.0801615393436	1.68518310607639	0.0919532494474096	0.862849419422016	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.85774282263707
Merged-chr8-108847129-4	13.2126576609736	-0.270689369339253	0.644427882048453	-0.420046023581116	0.674451832628974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30779555871676	2.01960854862221
Merged-chr5-147911308-4	14.0188725951378	0	1.34988604938159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35036359-6	15.0644521392593	0.554256485278748	0.583152003950903	0.950449422318048	0.341883941746759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59016101190973	3.40207607981766
Merged-chr17-84028706-4	8.0257947675525	0	1.36389202648459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110993517-13	110.265467994889	0.314941366309607	0.180490285748274	1.74492142335487	0.0809985476545773	0.800399936730625	C57BL6J_F1_Control-BALBCJ_F1_Control	7.37327386668544	7.67961056661191
Merged-chr6-136745897-2	6.10906280199347	-1.08507717966625	0.904330753422999	-1.19986760989726	0.230190761151252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87552666999187	1.07599819202159
Merged-chrX-163302891-4	9.77189839220817	0	1.34486761675375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72901866-1	8.26721182892331	-0.183577740288939	0.69323693924703	-0.264812403805738	0.79115398106942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95988517553914	2.39349575799191
Merged-chr13-37581092-6	20.9138202305271	0.488823447369313	0.412408040280272	1.18529077909613	0.235902498004206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79603832150636	4.34595670508443
Merged-chr5-109845055-8	31.5123757199913	0.680323427131507	0.366057122007041	1.85851711722309	0.0630956149032188	0.688229886433895	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29176141143561	4.97104731288745
Merged-chr6-51520826-3	12.6872668664852	0	1.36052519849556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108426435-1	2.67657997990249	0	1.61676935543524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50303710-4	5.35469623574815	0	1.35649383206557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19047632-4	11.5162311767624	0	1.35247937906349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22091274-2	4.28992181707108	0	1.38006662753535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101998435-5	17.9102660479537	-0.9645500192954	0.409507413726671	-2.35539085975913	0.0185032316090271	0.304331971871439	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41942115245051	3.49108182757686
Merged-chr7-118488413-8	33.6786192686546	1.0984020083251	0.321921550703269	3.4120176357424	0.00064483941202595	0.0259843036310739	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47558884541192	5.56278551352973
Merged-chr14-61328136-3	4.21701496238679	0	1.37168035789166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11709568-2	5.51964595379645	0	1.37549527567939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129360839-6	20.9665326675165	-0.245002706722904	0.471706844332683	-0.519396124237938	0.603484533522035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82758873272592	4.67122784692973
Merged-chr2-33908570-1	4.44655929921579	0	1.43472741056019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127398040-8	18.8818156811804	0.522028713521546	0.570633296740248	0.914823436528579	0.360284329095361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19316068746724	2.5164749401111
Merged-chr10-57637194-4	7.57710451850446	0	1.358655332145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98121916-4	7.60424631169714	0	1.37341378167107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106106361-4	8.79682361141314	0	1.34904622239353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137367924-9	45.8324886624682	0.143916975452915	0.416250833972218	0.345745794860126	0.729533764932146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63550964954847	3.80377244437235
Merged-chr7-80192427-9	38.4471127309606	0.209537067566394	0.355734539540765	0.589026491037096	0.555843502984065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65213719452335	4.86999153194782
Merged-chr4-43256372-8	22.8135305447631	-0.618549145445606	0.383259924579482	-1.61391553297488	0.10654574897419	0.949041882810952	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57299829933437	3.98380111961824
Merged-chr18-76005949-1	4.65530686211893	0.596788583796092	1.12635977085362	0.529838333398405	0.596224024776269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.13341594473881
Merged-chr14-51083122-16	95.9899112653666	0.294613327085789	0.203493961811265	1.44777429493969	0.14768018394216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.60133155744414	6.91162641599911
Merged-chr18-38946597-8	50.3463527465494	-0.030090561092581	0.416205353269292	-0.0722973908341633	0.942365241077475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27652551373361	4.12405235309587
Merged-chr4-35240076-3	7.1554655717705	0	1.37075995127719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111968754-4	12.2473480962174	1.28279437299524	0.56794994837241	2.25863982675126	0.0239057983016741	0.363495185980616	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91804444328128	4.08181589385908
Merged-chr1-160861407-2	7.9300975856194	-2.03652621364814	0.673981290104849	-3.02163612484157	0.00251412569496552	0.074274651441647	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25702127078805	1.62805269464997
Merged-chr4-12546647-1	2.93567521070058	0	1.41814359805137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41039043-4	6.11941074001327	0	1.39128122129747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12007825-3	6.72419813433961	0	1.35191668141962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18995737-4	8.41985683714902	-2.65922068547171	1.18257482106491	-2.24867013748616	0.0245334904560638	0.369422716814728	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0
Merged-chr4-120040334-2	7.82134956859852	0	1.43189800416181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-152352949-4	5.07039473769449	0	1.36756953914199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51499022-2	4.62726922333295	0	1.37227611000821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25961864-4	11.6872511455483	0	1.37938243113956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172563279-7	20.2098066679863	1.64090685483311	0.729840172324049	2.24830985886668	0.0245564385001633	0.369563521713836	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59691199589682	2.493612465944
Merged-chr17-28435095-4	8.29833341937175	0	1.36340655832818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32903925-8	21.0227133370011	0.391740127627213	0.377170397546989	1.03862903922201	0.298977294917195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30050681911561	4.61685525247316
Merged-chr5-103824843-3	6.36745782202427	0	1.38205126453794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40617955-4	16.4718621568814	-0.373225486695876	0.645768576407242	-0.577955478682982	0.563294177796828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46654535404304	3.03045273817294
Merged-chr2-72848602-4	7.79061124109939	0	1.3646553064246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83064261-4	12.1452465942568	-0.271262466067286	0.835096331486949	-0.324827754403236	0.745311437641242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.25298535761957
Merged-chr19-34390154-4	7.37257726297632	-0.968098492352347	1.01527132305004	-0.953536724985026	0.340318197934658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	0.577068348605183
Merged-chr12-111915022-4	6.75751887560886	0	1.35995116561968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121929092-8	28.854269339565	-1.29717232171274	0.380946457645064	-3.405130289783	0.000661324933221718	0.0265110339564892	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6040589012699	4.32914735336847
Merged-chr15-66297641-1	2.69944339432974	0	1.46777232308784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85974217-2	4.41592931008157	0	1.38735343959462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68801572-2	3.92871250940205	1.4600149993691	1.15949666110688	1.25917999451188	0.207965325766381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.39949824061849
Merged-chr6-17612410-1	4.13310513619739	0	1.38694555008148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48270895-2	3.72988797789384	0	1.41578682142433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31388527-1	3.50380098438403	0	1.37568342964617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110114878-2	5.02164049900222	0	1.4507030222564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42295932-3	5.90940718835106	0	1.38791201141997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4297472-1	4.98340211068321	-2.07693758893677	1.06287646915134	-1.95407241501463	0.0506926538206731	0.59464867696115	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76998768173439	1.06872581468896
Merged-chr2-127302068-1	3.01009531175597	0	1.40249030968867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119846087-2	5.48475745252291	0	1.37588638266507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93248107-1	5.53151577813043	-2.01212044863344	0.75795923469335	-2.65465523280746	0.00793895024763249	0.171865151935904	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25325959534148	2.06936074991249
Merged-chr17-35269847-1	2.12332388650303	0	1.47793911877826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17415233-1	1.62245060152141	0	1.7860574864082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33176686-2	6.32430282833324	0	1.39892680388455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11548259-1	1.60910793671421	0	1.53068056983353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9255200-1	2.24765197572535	0	1.43826337797239	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37472805-4	8.80548561743866	1.94672082716194	1.07226554896129	1.8155211916001	0.0694438523257613	0.728604864467014	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.62069611143677
Merged-chr2-126474697-1	1.63931478620632	0	1.59998283344864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-6854360-1	2.14139097818597	0	1.54204758545439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-112345496-1	4.65504791212742	-3.91927670295008	1.2006995655064	-3.26416100708516	0.0010978875601048	0.0385530167181762	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76620369058164	0
Merged-chrX-167151631-1	1.70425648587391	0	1.60993140716678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49192369-1	1.9132687318608	0	1.51824628469515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91599780-1	3.62795087376445	0	1.41374344645384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50033383-1	2.87732153098086	0	1.45696961784962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144274956-1	1.94949822572482	0	1.46216819293344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55389001-2	5.63841050353002	0	1.36273676654653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119048321-1	5.11591189032253	0.403105273561072	0.922862425455752	0.436798879705174	0.662257211544914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	1.79065725465852
Merged-chr3-51170416-2	3.75384611252455	0	1.39626317048862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-53082088-1	1.50405056308499	0	1.61694472612992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5818429-1	2.13751069150402	0	1.45603818957487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64310058-4	7.58743547593601	0	1.38282520101019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9776039-3	4.98699997287047	0	1.36796876377903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45101959-7	16.9771152286712	0.680408162711454	0.590771616531426	1.1517279159522	0.249432897124052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73132717883103	3.88154165242122
Merged-chr19-12002371-4	7.72822771885858	0	1.34923638056137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148586819-5	18.6195077681668	-2.440856304513	0.547957882844511	-4.45445969650485	8.41047256890258e-06	0.000768377946845337	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63495418563559	1.61960275079262
Merged-chr6-70864486-4	7.97874767903253	0	1.35847112506178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6357659-8	45.3115771033895	0.14142799391483	0.339391679948975	0.416710256232836	0.676890351593427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59548647074504	4.55465127759543
Merged-chr15-77933876-5	15.4020682838333	0	1.34005362280191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171397818-6	13.8996365120645	-0.722980487091462	0.879390024264495	-0.822138604194594	0.410998016564572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	0.730937814817307
Merged-chr18-84092187-2	5.31371243911508	0	1.37415581204983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180889963-4	7.1855117891147	0	1.36640298681128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80853532-6	25.9365964922029	0.196191264688736	0.425308212826596	0.461291973143075	0.644589143035894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62987693203124	4.90784143396578
Merged-chr6-120473744-8	54.5119607453009	0.134853849600455	0.337850463474559	0.399152477736971	0.689780856812482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38405380899497	4.53931068072997
Merged-chr15-59037806-4	7.797091477072	0	1.38640275026928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67172845-4	5.73360036293545	0	1.3661278754171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47319790-3	6.55469462337285	0	1.35885160912723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80778566-7	27.9920846074082	0.0908263173149254	0.359153974058173	0.252889634739818	0.800353499470464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57409117175491	5.66246139361738
Merged-chr9-107313145-13	48.1600194999206	1.20964396364609	0.279927151848697	4.32128128928311	1.55125765423024e-05	0.00126424010234336	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10416521236499	6.24631685215958
Merged-chr9-121561272-2	4.55622166163172	0	1.43201710214143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101097078-4	6.25703738370937	0	1.3542371553768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76114957-2	3.82407582550896	0	1.42089356070331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21729227-2	5.44633990291889	0	1.40116555057953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95844062-3	7.28532493068221	0	1.36421953961216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95279043-1	3.75500746017329	0	1.39345983982578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105478464-3	8.26973297315952	0.541484248570632	0.754183589559462	0.717974053090875	0.472773285531705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	2.27439318040302
Merged-chr13-42984863-3	15.8400672943913	-1.14955920913916	0.601037023531976	-1.91262628445717	0.0557959122819054	0.636651972235956	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45453010171059	3.33330690642985
Merged-chr1-54837853-7	34.3771353316035	-0.0457122022680297	0.369196660824009	-0.123815318822236	0.901461502481407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27240196627825	4.27070817859652
Merged-chr2-164860998-4	7.60549465145182	0	1.35757061750282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53802055-3	4.39201097580559	0	1.38925175642095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40310398-4	8.16612422926758	0	1.35281071773987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-162939806-7	24.1989224192296	0.0751809069887832	0.453625295579735	0.165733497936225	0.868366683056803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16917032521126	3.82827106705831
Merged-chr16-73473746-4	10.5416112836399	0	1.37073413263139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120880930-2	4.96173638261471	0	1.36974515176033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-118063816-2	4.08922079370137	0	1.37109365761254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114302956-4	12.1686854468619	-1.63015311644333	0.583346532059398	-2.79448497051722	0.00519824570200862	0.127055502749769	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16902509079066	2.06695797389053
Merged-chr7-88192859-4	19.2113034164586	0	1.35136401404279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30160428-1	3.61780609549272	0	1.48467943088173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134761930-4	7.3122333971286	0	1.36950681581255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92783818-1	2.27746524187534	0	1.46956984311581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-87238383-3	7.17320040086172	0	1.36667808095167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52267609-6	22.7015466420348	1.54196074846648	0.378563927361806	4.07318457205452	4.63746440213756e-05	0.00310871913569964	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15250691631047	5.69487547793098
Merged-chr12-118994453-3	10.5351228356982	0	1.35858583530241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-94582673-4	6.92155077564378	0	1.35640547834116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74260581-3	7.45049064216912	-3.45627368910296	1.12188562046524	-3.08077189515064	0.00206464753156071	0.0639864168575305	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10419491793461	0
Merged-chr13-20292452-8	26.8483227237751	0.0713454110950378	0.345365713465712	0.206579310896537	0.836338419247599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33410130948216	4.41137494816633
Merged-chr2-167314866-2	4.28093981485944	0	1.37349453469901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145029826-6	22.8419335696491	0.810146492541238	0.408483810683475	1.98330134843215	0.0473337788836312	0.568748206528582	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20513700404751	4.78339838823616
Merged-chr11-44545377-3	9.43703709617809	1.1232256048722	1.2459930232354	0.901470220078427	0.367338360633136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr5-64412536-6	18.8457575176367	0.426448512318357	0.695272696859246	0.613354320175022	0.539642083265178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72927293046596	2.32141208096419
Merged-chr11-110472244-8	41.0344949004138	0.922566849323746	0.361417888633439	2.55263194860684	0.0106912405177155	0.210338452154361	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12532516794893	5.02469942803579
Merged-chr13-19364595-1	6.24705049050401	0.94923431110406	0.880874089991691	1.07760498564899	0.281210076329867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	2.01086664255504
Merged-chr18-9491618-2	8.41273216486275	0.779775978931705	0.923772544440205	0.844121189382436	0.398601688149577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.43852373395375
Merged-chr1-93115315-4	7.52639122532505	0	1.35726354900191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64107836-4	12.9418401220699	2.99958427780718	0.664698750480001	4.51269733189822	6.40083343058363e-06	0.000610426148163325	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	4.71472359421178
Merged-chr5-104947153-2	10.3269203143019	0.131878227001918	0.733574259435582	0.179774883463586	0.85732930243323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51741075009849	3.28933414722327
Merged-chr2-71039888-4	7.36095074104409	0	1.37250340692038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157248254-6	18.2733201752841	0.97522834425245	0.820122676203469	1.18912495965482	0.234390497859892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	1.67656321522231
Merged-chr10-120702046-4	5.06060326574272	0	1.36477109141925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67414712-4	6.81869805967266	0	1.36112638880047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131462780-3	6.30331362866662	0	1.37365864815775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99664641-4	6.6375584109799	0	1.35738133527997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25090296-2	9.03633643182374	0.961262116751209	0.763507358445432	1.25900832011419	0.208027326687745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47837108115259	4.2537746579502
Merged-chr5-102576887-2	4.10760120750587	0	1.52325668723492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139282428-4	7.79750237848313	0	1.35505872107572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115124915-1	2.38270432833979	0	1.45993486362725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58461954-2	2.78369131688173	0	1.42235279951997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61332375-2	4.27602605283088	0	1.40225019634533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77921790-2	3.72764673159838	-2.18458806513755	1.24441491763448	-1.75551420525418	0.0791713930221835	0.79016716666202	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr10-40643436-3	9.15549432885945	0	1.36609443622458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94228075-4	8.87691257797761	0	1.3769742867865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123925578-4	19.6462084896543	0	1.34818143852187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3284627-3	6.64186800267744	0	1.39425222880813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19551792-3	7.67082176569505	0	1.35593685172589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6717183-4	6.50347802878811	0	1.36731424634694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172352667-6	20.301644990104	-0.534383480542984	0.633292957969234	-0.843817184161624	0.398771571414987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84681464190051	2.13118170172995
Merged-chr4-133465317-8	26.8093685748456	-0.670153409034254	0.350357363318648	-1.91277101381984	0.0557773734765405	0.636651972235956	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42045212880465	4.64405342677163
Merged-chr8-35109856-5	22.4571254003597	-0.790927097259899	0.418076163840056	-1.89182537936433	0.0585142506349269	0.655908101470409	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15115803156253	4.44690421369735
Merged-chr2-153338908-3	5.04463156079255	0	1.3627068686235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56801116-3	5.47949521931738	0	1.37335529935651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-17932074-3	7.49299011674356	0	1.35061539238516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105694346-15	66.1642795795663	0.0823301440935968	0.261086502525412	0.315336653933627	0.752506057728979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06248004259635	6.14448919393929
Merged-chr18-36472495-8	55.550597248193	-0.218919003881673	0.359431317107993	-0.609070477339342	0.54247772517775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45585958047665	4.19996806290864
Merged-chr5-86935468-4	9.727618580572	0	1.36682491045178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128559389-2	6.00836298592874	0.552969221586045	1.25154708408408	0.441828540546459	0.658613284045099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.723581231604105
Merged-chr6-120174493-9	52.6915839042936	-0.236763588090394	0.359812690313125	-0.658019003955507	0.510525919783917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94397871409038	4.62468370999269
Merged-chr16-17409726-3	6.48801805946328	0	1.35733515069139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64036533-3	10.6347566014132	0.580245563572732	0.654272633538613	0.886855927986001	0.37515647207789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12463916324663	2.58582903245473
Merged-chr10-127592969-2	7.57730268415876	-2.15622183430055	1.07617343140404	-2.00360069425559	0.045112851437125	0.550546430872889	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42194161705889	0.71701424649985
Merged-chr11-23659117-4	12.4345885745603	0	1.38047196820563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77517870-4	7.00029894018364	0	1.36354862971347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84882789-2	4.58468199628332	0	1.38853768904465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126829121-3	6.76294565741311	0	1.45209636793945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130491008-3	10.71766687007	0	1.35509326147211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153386885-3	4.22968126841378	0	1.39609342955447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3699637-3	8.12458520421131	0	1.3515763751172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53409723-3	8.45430404615723	0	1.39696423498182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82761488-2	6.2554203088431	-0.224143983061483	0.941151002153904	-0.238159426647275	0.811757444622526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52759435616534	1.68020903733389
Merged-chr5-122697463-6	21.858116670151	-0.803431824469109	0.414806085270085	-1.93688533750893	0.0527593611692703	0.61228567758334	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18329703432931	4.40898434418374
Merged-chr3-127932676-5	33.8920830688161	0.066290326916804	0.553515606917968	0.119762344707705	0.904671411758573	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05353529260579	2.84872831251098
Merged-chr4-132748965-8	29.1876358540675	0.319086294349145	0.553227281805962	0.576772521607241	0.564093134370331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6758573049815	3.73524763485187
Merged-chr1-86437574-2	5.61395116666872	0	1.37910330657037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98089566-3	5.02614347758824	0	1.38537656031574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54768541-12	77.7592312149814	0.926800514680604	0.284695962814522	3.25540448666077	0.00113230975360154	0.0395065634762683	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02234913506424	5.89282907695414
Merged-chr9-37232610-2	5.81834602453988	0	1.4148489363257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21286334-2	6.87055788848355	0	1.35718200590502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152428481-4	7.88608287634876	0	1.36601688419482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143466442-4	8.42311498231782	0	1.36321484029806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53707962-6	19.5161446908944	0.278589493847972	0.562866010471395	0.494948155804711	0.620636716985091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3248654278002	3.11917297130929
Merged-chr3-151294166-2	3.73020435127445	0	1.38957863427425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72188317-2	4.66710378768776	0	1.42659142340695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148509383-2	6.26627019768097	0	1.36868575269324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50322064-2	4.23687536408522	0	1.41382333552438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-39881745-2	2.80940822798432	0	1.4914071008326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105286519-6	32.1730190983021	0.0181418691484325	0.391929880394926	0.0462885583772074	0.963080258627716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33337843846775	4.39833928372872
Merged-chr5-67297619-7	30.0720456787486	0.843349034366126	0.45441989620082	1.8558805224352	0.0634705898214702	0.690592032046697	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64375032124195	4.33551412015757
Merged-chr4-119339088-5	14.5582709219587	-0.874192950264606	0.478687923055619	-1.82622729373315	0.0678160317109118	0.71887353599947	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62356763415655	3.4557238687011
Merged-chr1-105747343-10	27.3283133825028	-0.524324808233328	0.399895303366276	-1.3111552044238	0.189805333056177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65631566108987	4.05571296318189
Merged-chr11-114702828-3	5.24213580818282	0	1.3757153195589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153796248-3	5.18387248997554	0	1.39028990214833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72467195-4	7.83237372441349	0	1.35580915824417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111035844-4	7.06100244813501	0	1.35531252304877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119396234-7	23.2408239562769	-0.780560645686697	0.434992169263726	-1.7944245916148	0.0727454247180409	0.750056485711688	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30720498791915	3.33396083963389
Merged-chr7-80091471-5	11.8733440946683	0	1.35646458538711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22873433-3	11.3755941693406	0	1.40244840739602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149641839-3	5.57289144653382	0	1.38485027441977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168579725-2	6.1799934693313	-3.68384224665192	1.17465576311813	-3.13610366740391	0.00171208672655639	0.0549069748488959	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69623661795924	0
Merged-chr11-55446845-2	4.78387699558247	0	1.38498797664664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82815350-4	7.88822233615024	0	1.35054172051927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95571133-3	7.81263432922874	0	1.37946068468809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167334785-4	6.83480380819358	0	1.35719340804837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62045178-6	15.4552915903765	-0.244192686822744	0.506202190709975	-0.482401481669312	0.629520768784614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59886499916325	3.2017878678355
Merged-chr6-136742550-6	21.015528773691	-1.2305823287602	0.423460739135148	-2.90601280126577	0.00366066472479208	0.0987694657368698	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53156771048028	3.44003120371489
Merged-chr6-108844210-3	9.23931842748833	1.43633512676879	0.82868406649586	1.73327228655719	0.0830472841127287	0.812813704912463	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	3.08302302386165
Merged-chr1-127859282-6	27.0504085522575	2.46881166325371	0.386726935293516	6.38386271538069	1.72675906303954e-10	5.8665559942354e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12295565357098	6.22427373447022
Merged-chr14-47735490-9	31.7803249956063	0.152728694392761	0.374850526070057	0.407438922372531	0.683685644817662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26448679581815	5.48364017236452
Merged-chr6-56909116-4	5.57479652468591	0	1.35959899137468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34762902-4	20.6514381616249	0.691369986159035	0.568570918421555	1.21597845362614	0.223993129944565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29675716151532	3.16486571165303
Merged-chr16-45032809-8	30.2666046609092	0.027733080368451	0.397212854647969	0.0698191915088687	0.944337571837503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07142401388795	5.15168307749182
Merged-chr9-45396099-1	2.50217499716914	0	1.42325953478289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36324180-1	2.18911897043305	0	1.41088892341778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62774513-2	5.71263082875624	0	1.40110524468366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-69556863-2	5.8444959155597	-0.0310850298198574	1.15018419863247	-0.0270261318637626	0.978438891427661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.67591700901439
Merged-chr8-72033056-1	1.71438048421405	0	1.63654451362554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64503672-4	9.67720524708875	0	1.35477117434757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53986391-5	24.2545172813343	2.56884052222077	0.477142406405586	5.38380258751761	7.29284865566755e-08	1.31704970124064e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12570519757736	5.56270553601656
Merged-chr18-56819961-4	10.7714999207197	0	1.35979640735694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44760146-1	6.17276280529767	-1.09071961730183	0.732937976510568	-1.48814722699269	0.136712071027614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92769072268161	3.04457089332205
Merged-chr4-145230833-1	2.35807750451884	0	1.49083261555397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163303908-2	2.64355274046194	0	1.41898171451395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84512989-1	2.77826916298799	2.12458709106401	1.21861320717107	1.74344663143451	0.0812556288729083	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.40024388691264
Merged-chr10-17787586-1	4.39619084447812	2.4512867144359	0.923755045765918	2.65361117719628	0.00796355317467612	0.172192039388313	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	3.31622169558822
Merged-chr4-58331008-1	1.39544388853655	0	1.54675043994666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89500129-2	3.76178880736019	0	1.38188450059056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150472697-1	3.34372721973001	0	1.39298527500831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122411099-2	4.83416623933822	0	1.39831725073502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23517218-2	5.55199446890189	0	1.38199633592219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128793872-1	2.0652866199466	0	1.64752294429589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125386837-1	2.56461440157107	-1.98434490391273	1.10551282814941	-1.79495420892985	0.0726609959370683	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06205836083204	0.577068348605183
Merged-chr10-121449745-1	3.51221322894832	3.3667557135775	1.25884490371613	2.6744801552906	0.00748452057098429	0.164317873068714	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	2.38349950306539
Merged-chr2-129903955-4	12.5302201603119	-0.708686553652322	0.94782961679505	-0.74769403814226	0.45464472804363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.02186287315087
Merged-chr8-84191506-1	5.89675506413894	-0.828487757470335	0.677803634471336	-1.22231235616865	0.221589528384026	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63403390308776	2.72641927828261
Merged-chr14-102903014-4	10.4906454441372	0	1.36477205744878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179073155-2	4.48993487698821	0	1.39562395740895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66467441-3	5.20746613271577	0	1.38594719651818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31891216-1	3.88624194879299	1.02682893671726	0.938911728490955	1.09363735222225	0.27411406041161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57597341069752	1.96546615580882
Merged-chrX-10904258-1	2.75581005146431	0	1.44571136007042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84544659-1	1.86074484975393	0	1.61994221062392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122280817-2	5.21978853750526	0	1.35999837501853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164798746-1	2.69515972471226	0	1.42597146679521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33664667-1	1.81408505098352	0	1.61029689298032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105615371-2	3.89817631691201	-0.035224811223107	1.21762810049141	-0.0289290393420544	0.976921185263924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.897114879832661
Merged-chr11-76463451-1	5.58779865584692	0.506817687493517	0.724048407315275	0.699977629082515	0.48394127536949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12548978417018	4.29788618567927
Merged-chr5-25314134-1	1.98630446146807	0	1.5441968765385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99244307-1	3.1214297763281	0	1.47409920458694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108168146-1	6.43214572092133	-1.12882196561552	0.921137952253338	-1.22546461456086	0.220400214601974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15841814526637	0.897114879832661
Merged-chr10-121316541-4	10.1721049103068	0.297739313616024	0.645071906579875	0.461559882827042	0.644396968956439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6960750002622	2.95031018941741
Merged-chrX-7169038-4	8.4327966992784	0	1.35640669877395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128856455-7	16.8335227596532	-0.877876874754269	0.444566489307947	-1.97468071900978	0.0483043923410371	0.576587277836283	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49665822207698	3.6906047946354
Merged-chr2-155369719-4	7.2393644428581	0	1.36466959923915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94586510-4	17.7223897772276	0	1.36515774483571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-15228216-2	8.88001429616141	1.41118415280117	0.583826903033157	2.41712765456618	0.0156435298170081	0.27413495722848	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98256857160297	4.65479233954992
Merged-chr6-125418948-4	6.69482177863542	0	1.3578300539089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191269619-8	70.5553293721365	-0.339915551238318	0.345870540764064	-0.98278260555932	0.32571444460128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68665058312119	4.17854839121036
Merged-chr1-171102600-14	57.2394516530896	0.00929464683067723	0.256899290001662	0.0361801187952567	0.97113873851258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.12815711154532	6.16181777112216
Merged-chr12-52525070-3	5.31607732249228	0	1.36501055795571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63402365-4	7.64133650671472	0	1.37788170239295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37056888-4	9.50694790834243	0	1.35495939057887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16978475-4	12.5279818505166	0	1.34657607722185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91395856-5	13.8988356236205	-0.536805890185239	1.20250401346833	-0.446406734757544	0.655303468863122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.679405493272835
Merged-chr3-97876295-4	6.69508179788755	0	1.43307764745814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59542705-4	6.23628491565463	0	1.35865508673495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128746753-6	18.1939684783275	0.85115633583837	0.445614797081101	1.9100719756473	0.0561239467084006	0.638652212501977	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18668873662471	4.3122766590786
Merged-chr15-59721181-4	9.9003498805135	0	1.34968096769909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97548690-6	17.4231243906319	0.529964562427908	0.484584910785885	1.09364643973009	0.27411007323623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05530521385416	3.74343316725292
Merged-chr7-55968528-9	30.6358706118561	0.330299933210645	0.446519509838356	0.739721167682499	0.459469201257711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7732108197509	4.17347686464748
Merged-chr16-24603524-5	10.115911898927	0	1.35517208113757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17558166-3	7.6532654801453	0	1.37316882141086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146445714-7	28.744706140203	-1.67696441974089	0.480515009776387	-3.48993139781687	0.000483144556613537	0.020993808915232	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59047755109538	2.34294129188254
Merged-chr16-33414410-3	6.17085460500131	0	1.38498184855328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59969893-4	6.05171512238389	0	1.35713367620573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56301445-6	20.2806156709573	-0.77009998921355	0.387251108869309	-1.98863210866478	0.0467418246347841	0.56401301527261	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90812472792165	4.18633986624603
Merged-chr6-42310839-4	6.77095259832983	0	1.36292963701319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27233912-4	8.32479716893573	0	1.35218399478454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34860413-1	5.17646956793116	0	1.36427941916978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29544119-1	3.38240322523809	0	1.43060531263545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24467075-3	4.07045183500148	0	1.39486879592215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34158982-4	4.90804981326514	0	1.3867093369537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73681964-3	6.2875290351406	0	1.35533267313779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37913340-1	3.04748218929798	0	1.40815974150922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79883773-3	4.83420491687422	0	1.38105119252094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52618777-3	3.95244249018101	0	1.3980506421629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120862972-2	6.06738839175335	1.9162817783786	0.994441283783415	1.92699338777246	0.0539804539814354	0.621283823412418	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.07316088628464
Merged-chr13-37332866-2	5.01191332591545	0	1.37298424605921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83995524-2	6.32442024891214	0	1.39211517775591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150509296-8	28.9833858435849	-0.322164892346331	0.378355778653008	-0.851486644378146	0.394499079214255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03766004380793	4.71944044609257
Merged-chr19-40965516-5	13.0681835937404	0.016018561734634	0.617648964388514	0.0259347342231728	0.97930939545357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39184591427084	2.90286002632699
Merged-chr5-62821032-4	8.052727017914	0	1.3785179438385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62653261-8	45.5659285837501	-0.539123021173452	0.392714248548975	-1.37281247921469	0.169810650225787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9541217455901	4.51234580520988
Merged-chr2-68381322-4	6.59065342441974	0	1.36947864214323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39608888-6	12.51977617272	0	1.34257899029937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94431228-2	6.0452813761964	0	1.38808817325668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4548611-3	5.56755419800434	0	1.3703009359969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60020040-3	6.02964893471087	0	1.37110901823475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120085241-3	7.45954312546755	0	1.3670009872702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161999993-6	20.0033447103003	-0.187871006845087	0.292510032102639	-0.642272011987491	0.520696583323151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.30742256733173	5.11932556725795
Merged-chr3-14881557-8	21.8598907216387	0.09060495891957	0.453566734855293	0.199761031744263	0.841667479167245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41937237991838	4.58233352118196
Merged-chr3-105839997-4	8.17803670671593	0	1.34588616635862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61052385-3	6.83952340805458	0	1.35314611958061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128488692-5	19.1721077776757	-0.0877692737689366	0.476436250640456	-0.184220393916188	0.853840561242554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87416838001646	3.60081064082353
Merged-chr8-14818371-2	5.10536475272075	1.02542087774644	1.30589097496825	0.785227019255085	0.432320476428165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.577068348605183
Merged-chr2-104450884-1	4.18485493024505	-1.35266628920407	1.40183642185284	-0.964924486279376	0.334582635901182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr12-85362702-3	5.12985844144954	0	1.3759730830186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4601250-3	5.63299538261005	0	1.38430786371485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34236530-4	7.97334760464386	0	1.36294549454414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39925075-1	2.43716790500593	0	1.42483378520346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35030502-1	5.101814737696	0	1.41194287680557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63642463-2	6.81196953813993	0	1.38364857718914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146667480-1	2.65234895270042	-1.97065650295173	1.41775202535223	-1.3899867309039	0.164532906707459	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	0.465515277017237
Merged-chr3-137972348-1	4.5100904283144	1.17508887481674	0.902297974664635	1.30232906180854	0.192803921058739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38860239282551	2.49233917051521
Merged-chr2-69718942-2	2.26144442850992	0	2.1243022957119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46185422-1	3.09318422936585	0	1.40504347839778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124741147-1	3.61504388850259	0	1.39767743051876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102330969-3	4.5424563608352	0	1.39898407082748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121597803-2	4.34058070667292	0	1.44432758039394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97278281-8	24.3351541207005	0.28153285393215	0.523299288230531	0.537995866350434	0.590579902383443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87837514422973	2.93831354726175
Merged-chr3-100932431-4	7.18656936150126	0	1.36205913526675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125471472-3	5.97258666135751	0	1.37719751512372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131042942-5	25.218153010478	-0.0779169163938969	0.640999627825483	-0.121555322361451	0.903251198603159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56757889007095	2.4787829380081
Merged-chr7-103861109-5	21.1820190490454	-0.41189945228635	0.589652400369496	-0.698546214733018	0.484835666580858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50887834737526	2.35532669962609
Merged-chr9-85577525-8	25.08839015907	-0.0357244474388005	0.352575516096013	-0.101324243482273	0.919293071712998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03098053642915	5.00093065741944
Merged-chr7-84188398-4	6.90888480516916	0	1.3701240262264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135608292-7	32.1887316970572	0.789671203067802	0.37004272072209	2.1340001001151	0.0328427726231617	0.449358237357777	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97722390599976	4.69067155393231
Merged-chr7-100242543-3	7.72874369057556	0	1.35547813320797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135175676-3	9.29024911013737	-3.67622425522689	0.801901819188919	-4.58438198699337	4.5533116544623e-06	0.000465250880122023	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65383339486133	1.08976818821237
Merged-chr11-115376918-3	8.83834374671532	-2.59806528491179	0.783933420522034	-3.31414022785467	0.000919253932088036	0.0336270016785825	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87845167313704	1.14143228603163
Merged-chr7-101366553-5	13.2672810090562	0.602662922511222	0.69660253358316	0.8651460387479	0.386958638379259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90781241071831	2.8131879999632
Merged-chr12-116597134-7	48.0700757506424	2.81214546683996	0.328672247072197	8.556078256958	1.16772044963301e-17	2.11587053072003e-14	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0714204225784	6.88939226232317
Merged-chrX-49274688-4	11.416821430672	-4.30779651819288	1.07075937520836	-4.0231228583496	5.74315178324598e-05	0.00371657128316033	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66426113201814	0
Merged-chr12-3812808-2	5.82030163783442	0	1.38111304016641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146209184-4	7.87178973054292	0	1.37892963047795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6062471-4	12.3037654816726	0	1.36179589559429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102450633-8	45.2339384341325	-1.11621923605846	0.318922005512404	-3.49997559517744	0.000465300755222927	0.0203813728873192	C57BL6J_F1_Control-BALBCJ_F1_Control	6.70118053030255	5.60719665162648
Merged-chr7-80029828-5	19.1506078844894	-0.302990722373916	0.502618504785809	-0.60282444734707	0.546625481387995	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71264671366933	3.40909081607485
Merged-chr11-32556687-10	45.5337705111004	-1.09404965078596	0.273014822625108	-4.00729030118727	6.1419352212794e-05	0.00391337265471084	C57BL6J_F1_Control-BALBCJ_F1_Control	6.47688336172237	5.40342119574415
Merged-chr12-26464610-8	47.214701272252	-1.13876696869867	0.374845684690825	-3.03796206067555	0.00238183939780313	0.0711788938016385	C57BL6J_F1_Control-BALBCJ_F1_Control	5.55441796519696	4.40848357913216
Merged-chr17-27591937-5	19.9826656257978	1.53731325033774	0.44805485188978	3.4310826985887	0.000601177297107217	0.0246265235067455	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37345151039306	4.80423618050637
Merged-chr14-122223893-4	9.02877153988403	1.44130221545582	0.970386543460871	1.48528668824635	0.137467896628487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.51301315377886
Merged-chr12-25223766-4	7.1778727377513	0	1.37052183935445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79622702-3	6.58161329919275	0.741838953771023	0.88881062809127	0.834642307736722	0.403919133660164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	1.97731223551783
Merged-chr15-9128727-1	1.5686170422504	0	1.4866017172334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71980649-3	7.75026047779448	0	1.35816335814723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110753977-3	8.40625179663717	-1.95599534277187	0.757902314290789	-2.58080138546905	0.00985712739118302	0.199413318889958	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53698851098525	1.44790810950236
Merged-chr19-11293136-4	12.0058975286305	-0.0435228083210505	0.674901025032928	-0.0644876903527107	0.948581908385574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26953890093924	2.41872607928193
Merged-chr9-77806939-8	23.6577509399844	-0.170969121141788	0.299314094580395	-0.571203041345138	0.567862016851553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45367686490715	5.32061688375586
Merged-chr4-124711127-7	20.2339942016414	-1.25097040554492	0.483833433812955	-2.58553939872731	0.00972267603102218	0.197133512260475	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03930997358261	2.37386910212741
Merged-chr4-85591242-7	20.0837423961475	0.92734262281889	0.424718493547179	2.18342887561565	0.0290042414135528	0.415233489333505	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66202020463309	4.63503928135095
Merged-chr15-67118526-7	23.316961467365	-1.16927907068391	0.431640387585786	-2.70891951799001	0.00675027121392032	0.152130179484865	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49769228751706	3.32274027096608
Merged-chr11-46850587-4	14.3232274036069	-0.390126557437156	0.575309121416159	-0.678116412402494	0.497697885279942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26078074265067	3.52224119497215
Merged-chr2-58715057-4	7.15360244071273	0	1.3923234061885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120011740-6	19.4055657238646	-0.334048248185072	0.776087846114677	-0.43042582081064	0.666885915916643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66840304550736	1.6655665839746
Merged-chr18-45881734-1	4.50465419538644	0	1.40750841642482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44393578-8	27.2330289616441	0.27235066281333	0.487536423530153	0.558626288557672	0.576416794905801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11388250438705	4.1827660051484
Merged-chr13-85556273-1	4.38300920782196	-0.130807451046735	1.01024276723143	-0.129481205201016	0.89697689583178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	1.07599819202159
Merged-chr9-88709657-4	9.57825471770376	0	1.35793070911625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90036040-2	4.57342169584458	0	1.37332450161783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86648623-1	3.53131048626381	0	1.39569584529139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124025014-6	17.3669965633248	-1.00643009321025	0.429923555551364	-2.34095126962637	0.0192346774759271	0.311926561131838	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42109121317987	3.37095208021071
Merged-chr14-45291822-3	7.32059155804848	0	1.35054511883292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45752276-3	6.28569469273017	0	1.36872576290064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34363902-4	6.42299569700826	0	1.36181728297989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95639281-16	85.6072229656422	1.2568072341305	0.248705136104374	5.05340281192688	4.34007210144555e-07	6.13347760108739e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.936068458264	7.09531363848416
Merged-chr5-118650931-4	7.86779634761772	0	1.35706095565309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3355073-1	2.91812534593165	0	1.40224840902379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26466142-3	5.93510514015655	0	1.36133657858195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100441182-2	6.91474675589354	0	1.3944999252063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55879813-4	6.17041407267575	0	1.3685341212638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80057506-11	30.4972470868606	-1.02251978306693	0.404649176166739	-2.52692911117059	0.011506472546859	0.221174095182005	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71484677945639	3.64485589740805
Merged-chr12-3434810-4	9.57480223351804	0	1.38120352907855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121377177-7	32.7777086134931	-0.267971954516376	0.432567577114243	-0.619491540036538	0.535592593423165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1506333927554	3.78051663678494
Merged-chr6-50074268-7	22.5043070345543	-0.177015958077884	0.366530644312468	-0.482949954730055	0.629131270727414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98538498268007	4.83560333782496
Merged-chr18-35027321-7	22.587704555988	-0.751030648605334	0.436857140508537	-1.71916761559871	0.0855838557364529	0.825689923646582	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29953113141005	4.53777951115581
Merged-chr17-37286902-4	8.66748305240057	2.67497335905142	1.12962278734801	2.36802354645431	0.0178833977053504	0.298215664887049	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30139522650344
Merged-chr13-83079414-8	28.6497360865891	-0.00264124124465123	0.332247294741948	-0.00794962453103688	0.993657184129902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79792072247332	4.76137363701539
Merged-chr14-75231218-2	6.01374748547141	0	1.37440637506718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77041767-4	6.95198322446888	0	1.37177985655595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42892161-1	1.77881903768636	0	2.06089442889664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8425380-1	4.24008030746201	0.541851332081414	0.966871081350607	0.560417352977927	0.575194798019286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8460126076219	3.09556672564937
Merged-chr4-88351120-2	5.138674155911	0	1.38772059018083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170535447-1	1.52877281549168	0	1.45820123669465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117536020-2	3.7712271122065	0	1.38489109669414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122882463-1	2.80438450361083	0.942893060712487	0.942653936198824	1.00025367158029	0.317187761241408	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.07866521149569
Merged-chr16-29848009-7	24.3078163305382	-0.30796430577709	0.428791804409805	-0.718214067083152	0.472625305650099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25626301352581	3.86126045762411
Merged-chr14-74849255-2	2.8384216185898	0	1.53984499170393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34489345-1	2.53998340700123	0	1.43990597474911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46699351-4	8.64290511923801	0	1.35670293876145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117405217-2	2.66973551400523	0	1.45965157416979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10979250-2	3.52992794630948	0	1.42625409203578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18609552-1	2.66939853737035	0	1.45743503070554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5605986-1	2.86016654401557	0	1.46494517388686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181553013-2	2.45898551037879	0	2.02959595300727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118864308-1	5.00932486632026	0.00056636063743188	0.781549586048971	0.000724663729009246	0.999421802049455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44942824277054	3.68609494414838
Merged-chr9-110982828-6	25.8762731867889	-1.36224213774007	0.372061734970551	-3.66133361671253	0.000250905783235336	0.0125589203231028	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61411487628463	4.27625586708792
Merged-chr6-94274126-1	1.37308819751406	0	1.67233139972158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60599081-2	2.77869331396498	0	1.41205132333707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99455773-1	3.53093659008502	0	1.38404130928602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8641576-1	3.24043908764507	0	1.41326153558866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80968719-1	1.90148054892175	0	1.43731874949021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64267487-1	1.74374522152916	1.9318933931994	1.47940842376639	1.3058553420164	0.191601755786105	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr17-21515899-4	8.92165279634975	1.78456464038222	1.24622110096114	1.43198076088255	0.152149327414073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr10-96173136-4	7.430587599669	0	1.35206590568214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85146538-1	2.66514900375513	0	1.41857913944976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55589589-2	3.94785093005382	0	1.39118552779605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25027997-2	12.5425214296611	-2.12942262365447	0.666729152364198	-3.19383458200922	0.00140396540356231	0.0468784738158744	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99778390493607	1.9134233865196
Merged-chr6-97285075-1	5.11128774749585	0.12193072620973	0.763645183941945	0.159669344839343	0.873141550315293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9263773140144	3.08017822154978
Merged-chr7-96849086-3	7.61249416057326	0	1.37979088458107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16057366-4	6.99647146461238	0	1.36832227281535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170240292-4	6.85237149887404	0	1.36399581461032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53914173-3	6.08479196360287	0	1.3670429089407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45843625-3	8.99810611584817	0	1.35758616116266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24156223-6	12.6718602156361	-0.384164822033289	0.588980035007169	-0.652254404563328	0.514237068545942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50708010092678	2.6611395155814
Merged-chr11-55386639-4	6.16196320222801	0	1.36109355708354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85570018-6	14.3634025278259	0	1.340111991419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4381682-4	6.32139152218632	0	1.35236157950007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52931563-4	5.34005850335533	0	1.37962988221154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84626556-4	7.31600868196157	0	1.39843163134315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25116243-3	4.0373135310469	0	1.38524451222513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25207907-7	27.9509689348666	1.63904381782733	0.529298701477677	3.09663298483732	0.00195732045289059	0.0612891604255068	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45607327397732	3.70136067929567
Merged-chr6-72395066-3	7.63703262677118	0	1.36475903187923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119395808-3	11.0957456920451	0	1.35658014553098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72105682-4	6.93026505070859	0	1.36094832200061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148956282-3	6.92795476459954	-0.676690185441512	1.31898867496135	-0.513037146025034	0.607925336941396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.413263464506793
Merged-chr19-46609861-8	36.5743672296047	0.129513100346427	0.323886122446685	0.399872335894063	0.689250548936392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.85968581975002	5.92480070225853
Merged-chr1-13427030-3	5.21932032708444	0	1.36014147971291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123283171-5	18.7917851281059	-0.656603226945229	0.488853838171492	-1.34314835166517	0.179223941718842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84758385661402	3.62322771458879
Merged-chr3-87332125-8	45.9681669782252	1.41930273804333	0.28773412855082	4.93268819097574	8.11055734315484e-07	0.000107501864644832	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4059116610185	6.79601791534834
Merged-chr7-98711689-3	5.93527679019581	0	1.36152711082603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25189290-3	6.42044349996934	0	1.37002789994961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95762407-3	5.07436289319912	0	1.38127364701362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70695232-6	25.4596010779748	0.686006126925768	0.5672859102625	1.20927756976783	0.226556225212123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18961386801669	3.81747572996216
Merged-chr10-68844835-3	7.62610437261044	0	1.37718988911754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48594073-1	5.92119768525975	2.39823237115922	1.01771926597202	2.3564773227209	0.0184491940760825	0.304113231795661	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.56897576951911
Merged-chr14-44980106-4	6.55911245859955	0	1.38176167373035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32501595-4	6.70846766230094	0	1.37649785306569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53149736-8	25.5710183389065	0.129896504451154	0.40115909710413	0.32380296343482	0.746087212478345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51549834572931	4.74536952330169
Merged-chr8-80916676-6	18.8028634966229	-0.848105144182549	0.537532232036172	-1.5777754218941	0.114617212162937	0.98880765528727	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11340730250193	2.97453364106451
Merged-chr1-91428786-4	7.19184619400274	0	1.36897759992385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90140435-6	12.1869017981922	0.0429274755341515	0.618343528937046	0.0694233440235807	0.944652647900435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76670770598174	2.76986045445247
Merged-chr4-139043782-6	16.350523566257	0.248880744599361	0.406105690224446	0.61284722324824	0.539977362769406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42119248490503	4.64467575250061
Merged-chr19-60611851-9	33.6911619128095	-0.367964497568566	0.284280700480316	-1.29437030704814	0.195537541927778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05604307037489	5.70745262336395
Merged-chr10-8879093-9	46.2821157426248	0.482657188013153	0.347449716992566	1.38914255619751	0.164789405305013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43655429784383	5.98337149674322
Merged-chr3-20255323-1	2.78389090188002	0	1.44449747206629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73939146-1	2.74749345102651	0	1.4362838004514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40719205-3	6.33177836587583	0	1.36917885782351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102862712-1	4.9235890354463	-2.17661655353255	1.26173729599096	-1.7250948834187	0.0845103744854894	0.820192723916572	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	0.376242425970964
Merged-chr5-65476053-3	8.58828341829762	0	1.42248636771777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32319240-1	4.41858752186053	0.247178526425126	0.791642012982304	0.312235230535511	0.754861759427053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77917504929676	3.01086277553065
Merged-chr13-111977918-3	6.28803779594352	0	1.37770268714965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21547206-3	6.46778360682159	0	1.35886051351127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32292184-2	3.41950120613894	0	1.37650966197344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-67424212-2	9.03374563977873	-0.720650602943716	1.02324298464615	-0.704281010236223	0.481257789910632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	0.662147012823607
Merged-chr3-9896551-6	25.7595257106517	-0.982138590606058	0.491255420131589	-1.99924224824426	0.0455821494210911	0.554553625000595	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7730869529346	4.18991421974952
Merged-chr1-155108617-4	15.5830880783158	1.0805145197318	0.764854162989938	1.41270659429752	0.157742011858556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7821740460218	2.64319014789903
Merged-chrX-155152794-4	8.6708745007902	0	1.3553565536597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99578902-4	6.888362645352	0	1.35875559596441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84921919-4	9.85293773693375	0	1.34922026071192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39275204-5	11.7037769824671	0	1.35934337689738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178303570-4	6.93944014841717	0	1.35070363784265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21986379-2	5.00376675692986	0	1.38000346597746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38141936-8	23.8542709383382	0.107919582594663	0.391621629692059	0.275571047185323	0.78287754988461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4774228283717	4.61838919501952
Merged-chr7-25187852-4	6.76140948470316	0	1.36080169071448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55196729-4	11.1712214490875	0.0684186059649217	0.897667526327855	0.0762182032414673	0.939245500721137	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	1.97656658922368
Merged-chr9-48410802-4	10.4021686331603	3.51872336663868	0.772980018262672	4.55215307447049	5.30996768768151e-06	0.000524808242790326	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	4.31297287010412
Merged-chr1-180312402-5	11.2850280629203	0	1.34449449096643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121215199-4	8.63364258330989	0	1.36677875793213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115321922-2	3.47817722326516	0	1.46290582706594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27791706-2	2.17200507720806	0	1.65440883201072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5421800-2	4.76771264908866	0	1.37863640212276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93124237-1	2.25531901029199	0	1.55226358227162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123957373-3	9.70871666859581	1.47752887344516	0.680482174481616	2.1712969550903	0.0299087323408081	0.422507479551452	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36759862365701	3.29897710901805
Merged-chr4-107285696-6	48.4947174606919	0.320837909594979	1.01028069992645	0.31757303650197	0.75080882984956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.02674429890598
Merged-chr1-171276545-1	4.29399829862015	-0.901759073679539	0.941004507400393	-0.958294106550804	0.337914474777824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97634481356229	1.17858215524007
Merged-chr5-32163568-2	2.46084176683019	0	1.49726911171264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117092058-2	3.00630706150337	0	1.40836992636272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83852339-4	6.02494167709106	0	1.38247219465474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71836046-3	10.7634944386482	-3.32168000285081	0.802162734167479	-4.1409054065547	3.45937610437636e-05	0.00243901719400512	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79564970874667	1.30139522650344
Merged-chr15-66103584-4	7.61005392207987	0	1.35599624505938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95684908-4	10.625503271379	0	1.355865577888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51527047-3	18.5718968729803	0	1.35284980831701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127628742-1	3.49458384005404	0	1.43505152955287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3923883-1	2.89087619120369	0	1.43589915383285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28085175-8	26.6654497782475	-0.103994314542957	0.435593244002278	-0.238741798627192	0.811305803146248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29167632810204	3.96172504999345
Merged-chr1-121462873-5	30.7316946760935	2.48445097037508	0.456757528557418	5.43932133581192	5.34839137911894e-08	9.99083185489782e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37232581226066	5.20267197177419
Merged-chr11-29879805-5	13.3895622557764	1.10648153868598	1.28318434572391	0.862293514079424	0.388526020965949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.724326877898254
Merged-chr1-131050200-3	12.636816477468	1.83989921343749	0.91583632208575	2.00898257589004	0.0445389816183401	0.546029432068414	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	2.49075998119831
Merged-chr7-125594042-7	28.1471170628739	0.412162946369123	0.512653432364038	0.803979687541512	0.421408706107331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22698849386928	3.54452435087155
Merged-chr18-50016962-3	9.66702331664263	0	1.35011310028232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76778932-5	22.3450406453402	1.94998135659018	0.635875162640449	3.06661035240463	0.00216500876238691	0.0661816772835068	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	3.11737434916371
Merged-chr10-39420041-4	6.98519982599929	0	1.38036150768401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35780515-7	21.1802030897208	-0.254624623759829	0.434223630988984	-0.586390526881041	0.557613108820988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03050332034478	3.7670785196094
Merged-chr8-40890255-8	37.4813484616363	2.9143920517798	0.688278739437656	4.23431944761355	2.29244880996073e-05	0.0017538699248128	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59660587240438	4.43974322271066
Merged-chr9-71129131-4	8.44654599635704	0	1.36568613580312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10794045-3	7.55659660430392	0	1.35662827461633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137955694-7	22.0062947013579	-1.0689274132625	0.502505054040519	-2.12719733795216	0.0334036902323559	0.453834340749972	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22657979456333	2.61279751490361
Merged-chr4-36285427-1	2.9131849293841	0	1.47728545801388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53929650-4	8.51273981585407	0	1.34974608311299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107082379-3	7.18241191676424	0	1.36370493445473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124279115-1	2.00913022917654	0	1.53670270635165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74903816-3	14.0124839774383	-1.46337275956982	0.749793777148949	-1.95170032636736	0.0509737938444341	0.597044701484506	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62068529406414	1.43110971815034
Merged-chr13-44407572-1	2.66944982676999	0	1.41278497345699	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128829997-3	6.33326338379566	0.840888207646195	0.96263691815975	0.873525824517203	0.382376536578484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29835464915396	1.45451904642141
Merged-chr10-13687396-3	5.0904849287543	0	1.40628741373311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44313819-3	4.26318172411414	0	1.40746516235483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37453308-8	20.440575707604	-0.659736438400696	0.412882208043903	-1.59788052269509	0.110069569574524	0.96551101056988	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72330721970257	4.06454306028538
Merged-chr8-24987614-6	10.7177620296261	0	1.34801570900576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125306570-4	5.47524979662712	0	1.36770267705889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48602505-4	15.179218095091	-0.066466784371978	0.442206092567812	-0.150307256026296	0.8805222085461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41350869845145	4.41362761141836
Merged-chr10-117905182-3	7.86391884373436	-3.85078521148359	1.07114232959029	-3.59502664128353	0.000324358382985339	0.0154936707739016	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11774774311448	0
Merged-chr2-68888298-3	6.30466880313137	0	1.36823654333024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99240796-3	7.63409544998108	0	1.35934343254125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67461906-10	100.662281537382	-0.0502136292753088	0.266398993095692	-0.188490311813122	0.850492309457339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83973123217409	5.84516914532668
Merged-chrX-53752606-2	5.06641744449652	0	1.39866557153326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4600139-4	6.47991848804574	0	1.37521459812068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67056291-4	5.92684437364094	0	1.37717532986402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96416596-2	3.95349764840136	0	1.45502293796332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29512191-7	17.9535403288686	0	1.3387898101458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8901282-2	7.1503927622804	0	1.35362479007439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165062224-5	14.8500122458779	0.677185517978292	0.506127721273041	1.33797357764755	0.180905050150923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3495736387588	4.1254543928909
Merged-chr9-83553741-8	42.4512001654304	-0.503840114521901	0.417761002344272	-1.20604870175673	0.227798712610287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57649232513333	4.01846901486983
Merged-chr11-74522784-3	8.78860875632427	0	1.35233236698092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21141439-3	6.4278069728094	0	1.36002140747998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30000768-2	6.03970885117899	-0.33162138051448	0.99853356285535	-0.332108396603309	0.73980741006247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46154891106775	0.97908007631626
Merged-chr1-152021045-4	7.44588000793715	0	1.35612652977325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113556725-4	6.56866596925637	0	1.39303263052776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31796392-6	54.0168230222744	1.69562880987902	0.519161431675074	3.26609163629138	0.00109042956636896	0.0384401172491896	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21849978611312	4.50220895204088
Merged-chr1-157427140-3	5.58732249740132	-0.0358180635986212	1.36705592867021	-0.0262008765314108	0.979097116752655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr12-69360833-4	9.60288584973575	0	1.34318222124937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28601929-1	7.54531839981216	0.176250137619785	0.638948385445693	0.275844092628614	0.782667815991247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37705875126183	2.53167902201956
Merged-chr8-117465465-3	6.84278659421089	0	1.37130148509581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92963749-2	6.58102928794919	0	1.4094317257529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11547296-4	12.3297316034018	1.86588716690775	0.695148724081645	2.68415535017023	0.00727133103786906	0.16067572515753	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	3.00074751117671
Merged-chr8-72216075-6	24.7410802222201	-1.13271363523107	0.399565123159139	-2.8348661321472	0.00458448917014058	0.115910812464964	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95893128720505	3.87072850278604
Merged-chr5-20865492-3	5.57929549398728	0	1.37760945724209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106666864-4	6.61911835430411	0	1.36260695419482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70682927-4	5.04669667469947	0	1.36832879715107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21286593-4	8.58116311632802	-3.71542343025715	1.12531478418087	-3.3016747691284	0.00096109439167587	0.0347482098204314	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27643187026249	0
Merged-chr2-71744989-8	28.5761913686425	-0.85083419851631	0.426254666927997	-1.99607010674685	0.0459262923250228	0.557380514511255	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06873996770532	4.3386270836008
Merged-chr8-128605746-6	31.829234706782	0.498352608398634	0.889472498653477	0.560278827229693	0.575289266842968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.25298535761957
Merged-chr2-164493647-9	43.8599762981572	-1.01077414313393	0.327481444378369	-3.08650813804915	0.0020252240284222	0.0629440554379659	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96630027951923	4.94416907689865
Merged-chr12-73554344-3	5.77403752868857	0	1.36650634115205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111083515-4	7.76818371651073	-0.180641227304324	0.819608432091466	-0.220399425178394	0.825560093047407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8131505516485	1.48948003571834
Merged-chr8-73350545-4	5.38519054190946	0	1.3692731261756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5706748-3	4.99253888792841	0	1.40062187339961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15683736-2	3.57350691138283	0	2.45110029504886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12289440-1	1.62747982444963	0	1.68332643615842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62201343-2	2.53553544821726	0	1.41726282917868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24930955-1	2.75964808869875	0	1.40965773436962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-71218025-1	6.26539480419194	-0.761067140079053	0.653419852296283	-1.164744440201	0.244122454531787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34257593450407	2.9423679385174
Merged-chr17-25333258-1	3.39767424489007	-0.146018470048987	0.977135373696187	-0.14943525122486	0.881210197546614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	1.30281892590853
Merged-chr11-4294129-1	1.97586619962111	0	1.48695967272986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31164371-1	2.78648430772324	0	1.41471127060336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53832517-2	3.127607149326	0	1.43579365355889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25504920-4	6.89776825995074	0	1.3532553179387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35308752-1	2.99397777824441	-2.88356313303035	1.2378187860473	-2.32955192273207	0.0198298456990374	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	0.303163067301871
Merged-chr1-74964666-2	3.55964226629221	0	1.39756643362742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3800125-2	3.15785563785488	0	1.45011943262942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146685484-1	3.37967342709779	0	1.39266844774614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93922735-1	3.0390044750799	0	1.40617989005117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50969659-1	3.21512564516646	3.22946196906798	1.1975170462958	2.69679832872313	0.00700096555860111	0.156289727638603	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.57666211312918
Merged-chr19-21276776-1	5.7148783316964	-0.669239046818196	0.784773548697081	-0.852779821554	0.393781415925958	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47561486258483	2.88419028238004
Merged-chr8-84554694-1	4.38631412912562	-2.67363352157098	1.18562513772229	-2.25504119009092	0.0241307434670604	0.365586143847808	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0
Merged-chr10-17478814-3	4.18366514291448	0	1.42682932451875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52046217-4	10.691677730265	0	1.36438870979778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65871674-1	1.72517069472095	0	1.46648159967977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53381694-2	3.55985859067413	0	1.40016680026809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26431458-1	4.39726470927676	-0.686500730395233	1.11573303331692	-0.615291212051292	0.538362420111363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	1.13341594473881
Merged-chr19-15518027-3	6.67371807404316	-1.50475588517972	1.05445702416365	-1.42704335093527	0.15356739946693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	0.723581231604105
Merged-chr10-26995826-2	6.15162726483358	-0.88757904288221	0.895161692412456	-0.991529296221545	0.321427194398301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09295338928517	1.44790810950236
Merged-chr8-46882005-3	3.83889469803865	0	1.45442294985967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94159893-1	3.06062803974003	0	1.41974439361992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96379195-4	9.12354987814208	0	1.34781655415983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32395535-8	29.1959219090213	-0.109886380933588	0.382013451628394	-0.287650553835681	0.773614243186529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47925903867065	4.39356516841387
Merged-chr1-53838523-12	43.350044584909	-0.581308124706081	0.347135561974748	-1.67458534469703	0.0940156166624363	0.875701663151709	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60264637106535	4.01363001405898
Merged-chr10-13686821-4	13.4788444849924	-3.10710568527825	1.00919574476077	-3.07879388256318	0.00207840423991232	0.0643027752290234	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60523628098419	0.55634759613363
Merged-chr12-79018119-5	19.0390449112234	-0.400190150337774	0.480718215658101	-0.832483848755171	0.405135891019442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84874727172802	3.17506841987098
Merged-chr7-90021223-6	23.3210187797194	-0.236143148784559	0.445773117506156	-0.529738424124013	0.596293303185464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89587575651099	3.73050898370358
Merged-chrX-76599081-4	16.3673246576613	0	1.35926858710552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151581798-4	8.21181930455237	0	1.35185023690678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84788455-4	7.63954658034872	0	1.35529162338452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77923959-6	31.3244410447633	-0.0270708356782256	0.362656856005741	-0.0746458676567721	0.940496478784987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47529548398515	4.43300109208473
Merged-chr4-95230248-2	10.8203771179897	0.584653868280627	0.613465131781467	0.953035206064322	0.340572233153757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26868420987533	3.84290210086396
Merged-chr13-78163195-4	6.49293203430982	0	1.37819049796171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4621441-1	4.90472652079429	-0.0757124466718432	0.992682010205193	-0.0762705941011191	0.939203820188146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	1.62518823153097
Merged-chr15-30609311-8	25.4700900530568	0.226329380872709	0.432829170893527	0.522906948266629	0.60103900910034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47582439505366	4.54356074957187
Merged-chr2-58533564-2	5.23120979140153	0	1.37942424702912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90396377-4	8.12430996744994	0	1.35089499159615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36718667-5	14.8315104114958	-1.3669160398402	0.553777546429308	-2.46834861516852	0.0135738052952708	0.249108197854702	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53848638335771	2.57808039585857
Merged-chr6-125449916-5	15.2199824770539	1.52372564125539	0.65323640839849	2.33257917296901	0.0196702430919347	0.316441179116447	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	3.05341993910276
Merged-chr18-68889690-3	12.6772206185524	-3.31155586756892	0.966491725790375	-3.42636753031777	0.000611712059986351	0.0249079070178263	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86136436759119	0.465515277017237
Merged-chr4-99211856-3	12.5640601958678	0.777319889086654	0.600627692697453	1.2941792370506	0.195603516862684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72549481808021	3.8794511489557
Merged-chr10-117419049-6	14.7866336860427	-0.301309710932705	0.643852907389387	-0.467979110561785	0.639799528258297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66194126857047	2.59699008846769
Merged-chr10-77523290-4	9.06560163190012	0	1.3460347214813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108568076-7	30.1643494188726	-1.07360024011592	0.375200122145024	-2.86140695791391	0.00421765279623971	0.109174946833712	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49081346430939	4.44554305659646
Merged-chr4-62729366-3	5.3444571125396	0	1.40695624641924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64317427-6	14.5289167967408	0.488466810682382	0.513580562698423	0.951100657150866	0.341553281183347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20695980746328	3.605299918634
Merged-chr18-20816678-4	8.17535988824422	0	1.36463504452348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78359733-2	3.35187395926645	0	1.43828205786245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-101552328-4	9.68786484335479	0	1.34908601469559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-76988129-3	7.02264292561748	0	1.39216626588897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97567796-5	12.1204987128067	0	1.34582276414287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107204332-6	23.7144955995856	0.186216864533992	0.503195016494873	0.370068976102209	0.711331097192851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28733049184916	5.65243580917993
Merged-chr3-65318109-7	28.9858723907698	-0.0277206497557253	0.405228478230643	-0.068407457138162	0.945461285800263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06018597961955	4.61866173729504
Merged-chr4-148662274-5	20.4891863171123	0.487158879813207	0.467806265221743	1.04136886576816	0.297704386497621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85367715292105	4.63377019981639
Merged-chr8-48011829-3	4.69179197712924	0	1.37330060770498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36662863-3	8.47809393636174	0	1.35105445527961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64491238-5	14.2956503276603	-0.209864575965184	0.649423635674518	-0.323155124693314	0.746577764384035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83260079823897	2.15890824657754
Merged-chr9-61971299-1	4.30829417842481	0	1.40678786758436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134731602-3	8.64889448891972	0	1.36984122272548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41682927-2	4.37140408112901	0	1.36082990302665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39416741-8	24.6193951681269	0.835293836304168	0.96500811218422	0.865582191235207	0.386719325205808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.25298535761957
Merged-chrX-21690415-3	6.66059473068457	0	1.44099544019273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41407817-1	2.73371516197959	0	1.42717940644418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93507150-3	4.08564059299896	0	1.39685850851194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31132268-8	45.3620015468596	-1.47220610215241	0.310755643825022	-4.73750398876541	2.16366599621687e-06	0.000243508736828887	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20794566408803	4.76865253834584
Merged-chr12-72490211-3	4.15511644435174	0	1.38321364901262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118484299-11	81.0458761929496	-0.0612694069195632	0.239012388382782	-0.256344063728778	0.797685175670327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04431323113747	5.94241426501525
Merged-chr6-136904399-5	23.9485546063964	1.58726176831912	0.438962731342333	3.61593742472242	0.000299262666643316	0.0146028898528402	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14242356165217	4.75317350985779
Merged-chr2-43561399-4	6.47252909938555	0	1.38977963434705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117090208-3	6.48139143512888	0	1.37209283461823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115992241-8	27.4732178627034	0.478928031971748	0.394216870063555	1.21488466968584	0.224410081565834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79954570656801	5.10418398861579
Merged-chr8-35709205-3	23.0688352964546	0.959124570084956	0.477966527298347	2.00667727823181	0.0447840369169254	0.548168309562519	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67113643952962	4.1342917071259
Merged-chr13-110561287-4	6.38553391198625	0	1.36551165378809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62389525-3	14.7080581764191	1.20864936178548	0.53757228475608	2.24834761028258	0.0245540330415412	0.369563521713836	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9803946365064	4.08030720369395
Merged-chr2-170239192-1	3.06701169801197	0	1.43794249463667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157131199-2	5.8712367588357	0	1.38885513702206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45031347-3	4.74994726100155	0	1.39592003647191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55858635-1	2.8404656048638	0	1.44686184415333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83144321-2	2.16990668853805	0	1.5661106102181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86125941-3	5.57484450091955	0	1.38426347008918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97809539-2	5.54263121450845	-0.675392790433408	1.35143844689403	-0.499758455137668	0.617245166862939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.303163067301871
Merged-chr15-17597308-3	7.00304482658207	0	1.37004272122384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3721695-5	24.1492148745665	-0.889505187948034	0.523235906531286	-1.70000792538279	0.0891294347772504	0.84628592926752	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83601891724767	2.57652457044436
Merged-chr11-51578616-3	5.30947847474912	0	1.44084955502247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27504666-3	5.81709640736835	0	1.37399350240264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84117574-4	10.9645513004023	0	1.34706784366073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9470577-4	8.52147219190111	0	1.36756956864609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102605949-2	5.32445979272622	-3.83473223750301	1.14586503497456	-3.34658281774708	0.000818142363778848	0.0307987539838327	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62400334963741	0
Merged-chr19-46484310-3	5.92138357959276	0	1.3614946812605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120527708-4	10.6248742476016	-2.40216862285283	1.01379378849672	-2.36948445542839	0.0178129038600801	0.297332440806709	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00626573557989	0.55634759613363
Merged-chr2-128742665-7	18.5177464039445	-0.748101191053737	0.420817240485047	-1.77773417788552	0.0754475235314073	0.766302677810868	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30968593040033	2.91595318078714
Merged-chr2-146402958-4	11.9222417803237	-2.41974180132859	0.642376965957594	-3.76685642474971	0.000165316007744332	0.00887023746538763	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52370257166227	2.57812733526085
Merged-chr5-64212442-6	22.2749334887802	0	1.35446451539993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95357918-3	5.7474797319853	0	1.38839270137909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51606451-4	8.8559215969468	0	1.35404792000887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16198952-4	8.16507903085876	0	1.41862644171831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63497354-4	7.68552760736479	0	1.35895143511841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134399578-3	7.56861767002375	4.07934028758052	1.16262154179285	3.50874307841387	0.000450229600008187	0.0199137760999553	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.29093568594087
Merged-chr10-56428009-3	4.22682620490247	0	1.40481185445098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-68598122-3	13.6218633650705	0	1.3468527583941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32184243-4	8.3165872847389	0	1.36198538037176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76721906-2	8.25005792949357	3.52678383719101	0.81064959879256	4.35056508070079	1.35787144824221e-05	0.00113209408059813	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	4.44796205720867
Merged-chr17-5785437-3	8.9720972671714	0	1.37258373038548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74053296-3	6.82498360708268	0	1.35982671966304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32138550-1	4.17517298533269	-1.30559439847492	1.03823256321829	-1.25751632604151	0.208566731036369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82361065065357	0.724326877898254
Merged-chr18-39319605-11	39.2654138144182	0.199247143529301	0.656416025098681	0.303537902657614	0.761479966930322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49065419848114	2.2226307791246
Merged-chr7-99089107-5	16.4509055891607	0.069064542394301	0.435078423766784	0.158740444530345	0.87387337203802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66109556476134	3.82826346911894
Merged-chr11-121801369-4	5.90332005312625	0	1.39096951194095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105283328-4	6.88823521910163	0	1.36507154762155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25972934-4	6.73451939515565	0	1.35609953477239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129585275-10	36.9589006687964	1.14009096062421	0.36641069162771	3.11151117223018	0.00186132430708167	0.0589835421063318	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41853758191728	6.05124250966146
Merged-chr8-46883442-4	6.01554182224876	0	1.35270035639315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5081079-1	3.42213156000041	0	1.39057053889968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77341906-1	2.09000330015888	0	1.49078580369087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-93728005-2	5.89500705954995	0.774628502789295	0.882627598094347	0.877639113553407	0.380139596012785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.93957782847288
Merged-chr11-84855491-2	2.95016464495017	0	1.41971918492377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30782600-4	7.74129252881363	0	1.35847336990769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43949136-5	14.634274909779	-0.874796518557809	0.717710254637693	-1.21887142186566	0.222892997998583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73671547441082	1.90216338684418
Merged-chr17-21370527-7	19.3651649184686	0.536295827215991	0.415865724482113	1.28958891210342	0.197193427512813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67097192008757	4.10444346745061
Merged-chr11-34008704-7	17.75489647749	0	1.33653298701576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118181024-4	7.11130878977865	0	1.3636915892923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97662982-3	4.67113415079729	0	1.42695138804694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35287195-3	7.71391915963482	0.544004952849246	1.0070762973053	0.540182461155003	0.589071206849315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0.897114879832661
Merged-chr18-17641041-3	6.48479048329475	0	1.38874657873627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91065743-4	5.63198625668772	-1.30435910297366	1.33837965262214	-0.974580792840187	0.329768244906412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr1-161329393-4	31.8882247979125	-0.0040673523763533	0.53546194599155	-0.00759596906335055	0.993939351842039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26901647079835	3.44763946327303
Merged-chr14-105142196-3	6.83171442018627	0	1.34861472356148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-190826655-2	4.9253438526567	0	1.46007377054155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59206695-6	23.6882793822367	0	1.34807617510073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20455215-7	18.3229809991132	-0.122528891764718	0.486181203222953	-0.252023095406526	0.801023212302331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52107010669318	4.34284266838881
Merged-chr12-83703342-4	9.38455798359753	0	1.34552948432246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52156045-4	11.2107917204308	0	1.34944551485674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34051807-8	27.8018902778444	0.36646092685381	0.346418105024225	1.05785731617054	0.290120497420068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98617040736024	4.45367131644939
Merged-chr8-111726323-4	6.41395418855773	-0.0337205689490538	1.32009104597864	-0.0255441236812991	0.979620954348423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr16-85285617-6	42.4138449287797	1.95863457665033	0.315007778951765	6.2177339974523	5.04385658329642e-10	1.50647802204071e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71201406534693	6.70173495802766
Merged-chr7-31105272-7	30.2591710768331	1.66981273053722	0.355650231462748	4.69509811274261	2.66478790906846e-06	0.000292636779695055	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06993874298922	5.87145688386256
Merged-chr8-25445289-4	8.09678755121121	0	1.37376519298602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193876603-4	9.7783404533354	0	1.36672505860485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68483390-4	6.91983315789767	0	1.38210115504021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72843730-4	7.76920547234845	-0.504372995491893	1.25216758298569	-0.402799914600293	0.687095423979932	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.465515277017237
Merged-chr8-86827397-3	7.09649935702801	-0.859507372049246	0.862247882128057	-0.996821667950002	0.31885107881516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08355090189567	1.3626301568499
Merged-chrUn_JH584304-64262-1	2.30650616500382	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100585221-3	9.88814485526449	0	1.35807373519293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155697111-1	4.50554726898593	1.42610319935103	1.03811132839303	1.37374784413403	0.169519978011871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.57539587741395
Merged-chr11-109410207-1	2.13116161278671	0	1.45006340971595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70466909-2	4.38752808865843	0	1.40135627012283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62491694-4	19.8398447242564	0	1.3469442284512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44655339-1	3.10472918030515	0	1.37750152849359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105908451-2	2.38625976382413	0	1.60929139178674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23167358-1	1.61509949248287	0	1.5974235490014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99173331-1	1.90849174357771	0	1.48476134479581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62068725-2	4.25054265239037	0	1.39995374583959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-13640830-2	2.72283673316415	0	1.62833299777948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113063349-3	8.97186977621713	-2.04344111151359	1.31973386647967	-1.54837362548282	0.121532367430938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr13-115903102-1	6.73259185736952	-1.51527493347495	1.09639875190844	-1.38204729879288	0.16695717861221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76500458315685	1.66624882212637
Merged-chr8-12762159-2	2.41314352471003	0	1.52215184441652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8569288-1	3.30065378655392	0	1.42928385798538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3358105-1	2.17799282926909	0	2.0478403501094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53113996-1	2.1498170694954	0	1.46492967958838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-44180615-1	3.69135522491014	0	1.39625401785626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23104085-3	6.57046726022444	0	1.36542333107752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108858254-2	5.28743915091559	1.81950884277911	1.39362184505869	1.30559724593186	0.191689557411083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr9-43284379-1	2.99536925296901	0	1.39233664836752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84241613-4	6.88319057265785	0	1.36169661112053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76279226-4	9.96171155725754	0	1.37862096308084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43602833-4	8.44169449265186	-1.49440317036461	1.05935654319219	-1.41067063772645	0.158341752616332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8268693516537	0.577068348605183
Merged-chr2-73470581-3	5.66417362414185	0	1.37769560440941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57520982-3	7.72895898622474	0	1.36575360446682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171171336-4	17.3490195041563	3.89531280135892	0.939483582014843	4.14622764668747	3.37997790357488e-05	0.00239859293551471	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	3.83652898052102
Merged-chr4-129794101-5	16.839196039136	-0.494756183986666	0.793280646543941	-0.62368366875223	0.532835350403187	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38713383244935	1.79065725465852
Merged-chr17-5397656-2	6.05563527631188	0	1.36670860462898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47235014-2	5.9291960798942	0	1.35805869351849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104408483-6	20.6898144430256	0.480772499455464	0.576347993721706	0.834170509297564	0.404184906903337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57085801976395	3.78391108372066
Merged-chr13-28958565-3	10.1059618280206	0	1.35730962572795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130278355-4	9.65111692112193	0	1.35235846748706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9486341-8	31.9132133072066	0.770373287883617	0.741443958201116	1.0390175540073	0.298796572372392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	2.35612604634828
Merged-chr1-131252847-6	27.4892288735956	0.604261176992143	0.476088218041678	1.26922102688801	0.204362243623415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7057819243438	4.01350181012579
Merged-chr2-166261979-2	4.72887141561018	0	1.40879316186482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164081137-2	5.18984199795186	0	1.42292861595218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40293999-3	13.7700410450379	-1.68737693582105	0.4352542828731	-3.87676124559356	0.000105856140758886	0.00616085005943499	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94653674507794	3.26619118338657
Merged-chrX-142718932-4	7.79387364589532	0	1.34809843625371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8760746-4	11.8458607328253	0	1.34826488115321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56989687-4	6.86611412795629	0	1.3500830832078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59164173-8	24.7335893681	-0.305068419684723	0.425172920253381	-0.717516109687603	0.473055699860877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21888842660124	3.74987443799259
Merged-chr5-119058516-9	25.1074476369895	-0.503112183728657	0.40618798202084	-1.23861907786047	0.215486599512853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14603106765202	3.50872792623982
Merged-chr17-26234678-2	6.35198432967725	0	1.36963138401846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52471775-4	9.7193859221949	0	1.34706971521419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74919762-4	9.80442947460205	0	1.35704835784244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26530705-11	49.8435478262317	0.373746245921345	0.345808332675733	1.08079016786391	0.279790463030905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09208504138044	5.5125160339507
Merged-chr10-81303964-3	5.61558746131854	0	1.37048625221221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101466937-6	32.886337159267	-0.632535432238187	0.497335994468131	-1.27184728086018	0.203427386161566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51096333144883	2.5138668641136
Merged-chr2-93346713-6	23.0006982494881	-0.303004608091374	0.383610651778464	-0.789875376730569	0.429600552841314	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17775079202576	4.90490048439517
Merged-chr17-50331232-4	11.8863666904516	-0.334614726907253	0.93241849868692	-0.358867533600497	0.719694188432266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	0.815775955292901
Merged-chr4-138078114-2	4.28964868581108	0	1.37323328689992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-147022215-8	22.1742772571214	0.361819641648004	0.34141608089837	1.05976156921474	0.289253084561489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03193702889826	5.39610214621666
Merged-chr16-50630648-4	6.35022653182159	0	1.36731624216815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43742898-4	7.3395577150652	0	1.3495304793377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-33816723-3	11.2074381842183	-0.23493367225699	0.675005476215022	-0.348047061150289	0.727804840638144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48036551926041	3.12202028222022
Merged-chr9-78149977-3	5.986353000715	0	1.37857752310869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32249886-6	25.5602184294048	1.16959787945361	0.397141838207675	2.94503818769657	0.00322914804856859	0.0902020856999692	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82913844569934	4.86835987058404
Merged-chr7-122919695-3	7.26945243679672	0	1.39315284946342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-71729168-1	2.65091557161186	0	1.42687389613712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60284058-2	6.4553264343969	0.276358027922466	0.785040186039771	0.352030421928573	0.724815447549022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15897432561707	2.12705403103447
Merged-chr6-65614459-2	4.28018958149086	0	1.37825049975386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91244091-2	4.23871117566925	0	1.40175789366692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51785112-4	5.74360361281625	0	1.36151738204371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26465778-7	18.2026858612601	-0.290177631347653	0.471516590732197	-0.615413406550657	0.538281739890788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30716623338341	4.07963942920371
Merged-chr2-118541036-7	26.0988126165559	0.755723754120959	0.394232628157059	1.9169487762943	0.0552444395417075	0.631951281365252	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45498918340269	4.27454865779936
Merged-chr3-122888728-4	11.9901232633657	0	1.38736597497656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131502736-4	6.94025523361656	0	1.35599129889765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143056693-4	9.17302494511526	0	1.35242048971224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3649012-3	8.99669157731409	0	1.35469602991912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124857240-3	5.85123218490627	-3.8719042280839	1.12493803570961	-3.44188222388758	0.000577681706243029	0.0239346035591957	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80720849528393	0
Merged-chr17-64941758-4	9.07234331423996	0	1.34780224412645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93989418-4	6.17947309325656	0	1.37213501793181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25530561-4	14.1927858115489	0	1.3675906251303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83637389-6	20.7584085033435	0.803549842004458	0.609994821952326	1.3173060050455	0.187736073153931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35287325867535	2.87978730220226
Merged-chr5-101826659-3	7.96254655163747	0	1.37819677419939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22928796-2	4.22341740658965	0	1.37234521657559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90690825-2	7.98411056816836	-1.11749668150448	0.911759189183561	-1.22564893752829	0.220330813453284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	0.97908007631626
Merged-chr7-112405186-1	2.24991284100678	0	1.43971027566181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41505848-1	3.04640979169449	0	1.41780004555292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46176857-2	2.39510139744006	0	1.48164969727961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136909973-2	3.32962734017501	0	1.45325588567865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138966491-2	3.45282224388007	0	1.46266769938142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13775648-2	2.82137504259599	0	2.3493089647871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74121104-2	3.62738078340811	0	1.38682879253073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102514261-4	14.3270668309793	0.912607031118172	0.47767836782467	1.91050525330287	0.0560681906468297	0.638418679382282	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21021341497619	4.68978859717067
Merged-chr9-36916591-1	2.48502974399745	0	1.46077774305461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120062513-2	3.64216228699297	0	1.57262150095304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115367472-2	3.56202406538782	0	1.42646255894543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52675589-2	3.28338404558518	0	1.47829297261777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130842574-4	6.80300673398563	0	1.38440880653971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10129349-2	2.91772892091532	0	1.44548823752929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105281200-5	19.2635221017504	0.515570393905358	0.63093909998099	0.817147635835046	0.41384406305702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38371430436927	2.56268146380726
Merged-chr16-29989589-8	12.7512568285437	0	1.34585491987301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12158760-5	21.4271868887459	0.291124210415233	0.521496830873542	0.55824732420249	0.576675509360212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95895410867937	3.35865360983395
Merged-chr11-111101856-5	13.9781083521054	-0.834897563261228	0.449939478682383	-1.8555774783448	0.0635138063014302	0.690703517768888	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36372709768528	3.58447403974961
Merged-chr8-115046632-4	6.5447100688767	0	1.36185960442274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64080409-4	6.40754604776467	0	1.35446793475305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26169342-4	10.0589249817083	0	1.34842494559335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65558402-2	4.53325527073279	0	1.37269337298893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123190906-7	20.1202990564519	-0.139554736287112	0.327475819435787	-0.426152796647867	0.669996510746562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03536747013139	4.79338285888668
Merged-chr11-31814683-2	9.76323643089379	0.927133767799827	0.598101943814663	1.5501266588211	0.121111118591027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84955131455601	4.26094435811259
Merged-chr11-86840149-4	9.73107019728138	0	1.35155193189648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101315995-4	7.0706782361256	0	1.35801687605802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40236016-2	5.99391371050873	0	1.3674409604874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55569914-3	6.81931102466852	0	1.35526141063007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129558802-6	22.6966469784258	-0.583676002690515	0.747395240703467	-0.780946908547537	0.434833721137319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10356013656012	1.33175291456033
Merged-chr15-10890445-3	4.64463736770952	0	1.41907474546401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41020486-1	3.48392136228358	-1.29793237132655	1.42759367986375	-0.909174921151529	0.363257799978726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	0
Merged-chr3-138118564-7	18.1741460018525	-0.65850955497874	0.470262048378189	-1.40030342071993	0.161422476933711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01062454504911	3.46571415044511
Merged-chr3-19084549-3	5.48664028347053	0	1.40877781485517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4335983-3	5.86549815071713	0	1.4487719810764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80638039-3	4.52883245826455	0	1.43532205520164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41525724-7	32.5155614246164	0.742688080602923	0.406183474453261	1.82845469427975	0.0674813392486515	0.71686889197136	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48081565733068	4.3713222314246
Merged-chr9-73001764-3	6.91595309086514	0	1.38173981106779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102037219-7	21.5564387446089	0.0877989614038141	0.413717771190661	0.212219458572284	0.831935826722524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47689767388641	4.29093409293961
Merged-chr15-59501682-3	11.3100630037416	0.411657018610365	0.466493959461412	0.882448765436623	0.377534174502707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37103649031183	3.78587641766317
Merged-chr15-78351713-6	22.3351560232716	-0.822569385531699	0.490355422203289	-1.67749625737937	0.0934454807072602	0.872334344112306	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17207192012425	3.39910211543756
Merged-chr6-57542174-4	7.91944215992631	0	1.35470979581846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75642481-3	6.84024403650059	0	1.35915227274479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98534724-6	21.3011974944021	5.66348899748278	1.00102998563333	5.6576616872267	1.53449233325445e-08	3.36344632029753e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	5.24750350819469
Merged-chr14-14800532-8	23.3298182231358	-0.543233070546067	0.40523331949699	-1.34054393952692	0.180068569129854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68977829243394	4.09783478367379
Merged-chr8-57587536-4	7.97568641336569	0	1.37626969969468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43061379-4	12.1638194091656	-2.41687662063325	0.580750196066781	-4.16164581088721	3.15962150102172e-05	0.00226289677436153	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61374305362014	2.11912641430171
Merged-chr18-4333834-3	4.50180094313675	0	1.38855607662023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-84454269-3	7.60718900490961	0	1.357071470105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59011708-3	8.37003816838425	-0.0358987243967427	0.884757875420765	-0.0405746310872569	0.967635008956601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.30139522650344
Merged-chr3-20199121-4	5.97031372098075	0	1.36114271504215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31917481-3	7.72792344867607	0	1.37011177522282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60570762-6	17.0610090329096	0	1.34175021376323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100608141-3	12.7436095776361	-0.285905187807083	0.78918872304778	-0.362277335518609	0.717144793150383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	1.82415053547332
Merged-chrX-113172488-6	14.9146083456001	-1.83131139337484	0.574403949171847	-3.18819429430309	0.00143164303622183	0.0477147049699465	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35822053828129	2.68078947292863
Merged-chr8-68083234-3	6.71598112682843	0.46924673754989	1.23747491993733	0.379196967946352	0.704541602970906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.67591700901439
Merged-chr6-29360385-4	9.81593350360618	0	1.35634864931365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31050434-4	7.71624668159032	0	1.37897857479604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69454653-8	44.2805929335182	-0.52770385988524	0.31954379257445	-1.65142891881491	0.0986510238753162	0.902941742185269	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83036668793306	4.41750048097614
Merged-chr1-84177965-1	1.75719234630444	0	1.54840784631186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20749605-3	5.10431772069907	0	1.37879620307976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4570835-1	2.77989471434383	0	1.40585865076825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64601559-1	2.05537391335617	0	1.65396151110183	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69576869-1	1.43073383521161	0	1.56519775691824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98215766-1	1.86978649318225	0	1.53225763205117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111176752-2	11.5628102374698	-1.49843244400615	0.589670004347305	-2.54113730215045	0.0110492519377097	0.214816268269657	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2846932665951	2.38010611739581
Merged-chr2-124640678-2	2.86793334367898	0	1.44638384520052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-13127256-3	8.24308721179983	0	1.35260316805779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87960222-4	12.1025733738616	0	1.37816426285155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72107963-4	8.72856945835777	0	1.35669894245062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23653800-1	2.24668949432435	0	1.49917328794031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58710521-2	4.18008281478268	0	1.49986473678737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103341392-3	7.89517068790475	-3.36688842917945	1.00189883591621	-3.36050737707516	0.000777994530166048	0.0295534623796619	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86843309389115	0.465515277017237
Merged-chr2-6476914-2	4.17587719753663	0	1.45584577086232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-49384466-1	3.9192341318123	-0.0352205119736077	1.47264854961082	-0.0239164408798797	0.980919260108203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr9-55388302-2	5.43981038354003	0	1.36408483352594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126883746-2	4.72737498203729	0	1.37918203541238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128243861-1	5.52740035137381	-0.0381076082544659	0.84140349022858	-0.0452905279060744	0.963875737328547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	1.90216338684418
Merged-chr6-49130562-1	1.67437282569787	0	1.79937193584598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50048329-2	4.44679403221495	0	1.46188880803079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76780281-4	6.58789091419329	0	1.36296006524228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92098500-4	7.07631739654182	0	1.35493648923287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5989218-4	9.2655997520848	0	1.36539985021303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76196183-3	5.50103763974584	0	1.36484399958827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25052438-4	7.58591090103159	0	1.36151077945821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126655290-7	29.5914096729005	0.78325681326191	0.352728552091777	2.22056538552658	0.026380412459912	0.390313783589645	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36955685628011	5.18106460828957
Merged-chr2-142694656-4	7.8811821882195	0	1.35954766536451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69365062-4	7.55783087040094	0	1.3621412929956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7293137-4	9.92074311979477	0	1.34818630317355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19927012-2	4.91834249192909	0	1.39478531162569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26687239-2	4.57136773695888	0	1.38770604279482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75463764-4	6.4264145920514	0	1.35587188102965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183917140-8	23.4373748492056	0.308666701382102	0.646719793123169	0.477280430666076	0.63316244409795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37731560219965	3.92681012852066
Merged-chr13-6241648-4	10.538003902366	0	1.35553547626239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27761428-2	5.76457319390366	0	1.36315542208552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136700837-4	7.17547458419985	0	1.35188719180003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32280568-4	8.94621931968648	-3.17227282847938	1.10271352106464	-2.87678782193278	0.00401745628656708	0.105449013173105	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86737052669785	0
Merged-chr11-114903337-5	14.6472366799261	0	1.35255891095138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145884760-12	44.1566574405583	-0.283467672251786	0.304894521853305	-0.929723730451844	0.352514144489504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53742798310796	5.2692081861418
Merged-chr16-10967123-2	3.96973163915303	0	1.39344739370676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62348332-6	10.7160595450837	0	1.36119303048258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52228960-4	13.0271870401302	2.56809426987189	0.935209988670081	2.74600817034029	0.00603252612672604	0.141098191050649	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.15616166210206
Merged-chr10-19082289-4	13.0921241848169	-1.81601241607295	0.927062039703234	-1.95888984587729	0.0501256884519303	0.590491629533913	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50724812564465	0.577068348605183
Merged-chr3-15590907-5	17.3799763320611	-1.67656253878308	0.421096731585733	-3.98141902567045	6.85050592133865e-05	0.0042607168349891	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22263920395218	3.5457414808063
Merged-chr7-97906102-3	13.5527616425765	2.53687013396267	0.641870004635156	3.95231139583262	7.7399928248473e-05	0.0047273962917514	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86487465827321	5.52873110169496
Merged-chr1-128832737-3	7.66591175327851	0	1.36234389507675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42537853-5	14.7506702878805	-1.69613878120312	0.880315846866647	-1.92673889404612	0.0540121781332259	0.621517356296365	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37441905672497	1.02674429890598
Merged-chr15-25284538-4	8.42409793143021	0	1.3823929965446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79038036-2	7.61179338495547	0	1.36561974039965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80045135-4	7.16243482388273	0	1.36931731222837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121841100-3	4.61436578659026	0	1.38111439608598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27381597-8	33.2399907537103	-0.258124264719976	0.264218416868409	-0.976935172723147	0.32860124743184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.72298144889424	5.49029822119712
Merged-chr17-78989182-8	39.7099750211517	-1.25785484355454	0.35459208301153	-3.547329181384	0.000389158019447893	0.0177916238680976	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57493966249863	4.24557524574013
Merged-chr4-89524855-7	23.6256384925254	-0.803106378464547	0.463946986701637	-1.73103048728501	0.0834463270093966	0.814958478243584	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51998704459193	3.61466605271215
Merged-chr10-111576139-3	10.4447786939017	0	1.36040253144566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-147479104-1	2.33748272403157	0	1.4918789967922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113146280-3	7.67676657208603	0	1.36140781334061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112386695-3	7.6352090351741	0	1.3588611136054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84424096-1	3.92943891692241	0	1.39428557271965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53119466-3	8.90874825162391	0	1.35332760765707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56924792-4	10.3147593085472	0	1.36878432668694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47224781-1	3.18091994136818	0	1.40185678824317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-24357594-2	3.86807463731163	0	1.38762128529877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-71874003-8	58.0399600835252	-0.423686121315326	0.368628912369325	-1.14935673003001	0.250408914512993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.42238631368596	5.87181069830445
Merged-chr4-141246756-4	16.3548435641388	0	1.35495809562408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116205679-4	6.44540527620074	0	1.37260394645934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90018661-2	11.5429013992061	0.404405661947357	0.523097972173934	0.773097361220297	0.439464762669963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08531610990261	3.43890144018865
Merged-chr6-98575492-2	5.03374182322478	0	1.39950588746555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82954332-4	6.49702437166956	0	1.34688332274904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125389498-6	31.1410109903653	0.500834090405865	0.436906522932287	1.14631863823989	0.251663333758158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35757099485896	3.67774131454507
Merged-chr13-42096270-3	6.32467929433184	0	1.36359197244421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67196460-5	18.6412428738818	-0.0813338845032107	0.444330884859381	-0.183048010558507	0.854760347988741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00960433134719	4.85331491894316
Merged-chr8-69193561-6	14.3017923892848	-0.281812799746923	0.620359811643834	-0.454273140292846	0.649632245867281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46976107568881	2.40130849348195
Merged-chr6-124907964-3	6.54766042120697	0	1.42045457224237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113119676-4	7.66569457561598	0	1.35187602569719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54721228-3	7.56376617726669	-0.969201661953517	0.753307556752077	-1.28659490173214	0.198235521630411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3396475694937	1.86501351763573
Merged-chr11-103260125-2	2.76204500674846	0	1.42530757932826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-22930668-3	6.82363225313534	0	1.37366561746263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146177961-4	12.7877151865218	1.24443783614973	1.31112806352948	0.949135230009325	0.342551838400032	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr2-140847961-2	2.45099463130638	0	1.46671142180694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69306745-2	3.46042698577751	0	1.52209188307021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112707182-4	7.44140574588354	0	1.35098491096388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44392727-2	9.63024589481729	-1.02094149231888	0.545425777464714	-1.87182479175167	0.0612308471900919	0.675415507793467	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90381326672608	3.06066185834148
Merged-chr6-145801067-1	2.03126094877855	0	1.42254822476152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40317025-4	11.0619382180793	0	1.35079841174455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122603351-1	2.96557819711783	0	1.42703584545363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117227485-1	2.78644751833622	0	1.41519820017612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108854668-1	5.93063518947959	0	1.39020094379615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24165769-3	7.05826995458757	0	1.36075988224498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108609107-4	8.66332280550759	0	1.35422136650984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52909946-3	14.1005806640119	-1.19459360425033	0.432661646988709	-2.76103419973693	0.00576186424408286	0.136545594734334	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25132011009087	4.01748109298888
Merged-chr18-57740356-6	26.2003416684999	1.19240567936427	0.480340984742067	2.4824150285751	0.0130495186622351	0.24237315023423	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50516217208357	5.227864231419
Merged-chr18-69662338-4	7.52548390949089	0	1.35852963421944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113872427-8	26.4188045426816	-0.702553480952973	0.329739046854711	-2.13063477818122	0.033119242093227	0.45143652982591	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85760825825806	4.16015036128563
Merged-chr19-32108026-12	43.6368306193055	-0.384217485411824	0.303389494134671	-1.26641657947877	0.205363978231164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46847591618297	5.13620715821878
Merged-chr5-123675385-7	25.8861990502097	0.492413099309218	0.373072217178864	1.31988681181568	0.186872811411421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15720165345331	4.68086074454361
Merged-chr2-155299651-4	20.5844951479932	-1.06212060596424	0.466924086571785	-2.27471796060567	0.0229228543568081	0.353867269428049	C57BL6J_F1_Control-BALBCJ_F1_Control	5.83393905622649	4.66358610257514
Merged-chr10-14678470-3	5.02711635523381	0	1.36479380613226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96977438-3	7.11946191292982	0	1.35391158225849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141867682-7	29.4475774812221	-0.117055837388407	0.389215768255693	-0.300747931958163	0.763606715403972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44229815196314	5.33931047802277
Merged-chr9-108284602-4	5.09829454426697	0	1.39217743118639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14244616-4	12.858479752982	0	1.35855747450345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-158308727-2	4.36439102232017	0	1.4130112114574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87549534-4	7.57486050939944	0	1.36934615647103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76536942-4	6.08739123913478	0	1.38839115258288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54640545-3	4.72117771880541	-1.34657879811331	1.35873985008796	-0.991049756895067	0.321661284734037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr7-122705972-4	10.2011926927482	0	1.35078846589276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59943724-3	8.01186744599578	0	1.37371394522358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31076984-3	5.3381450483117	0	1.4277625830539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4584685-1	3.11224035795503	0	1.44257563658008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26466918-3	7.31050246369166	0	1.38428888573882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38476428-3	9.64206408741225	0	1.35387602099117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16371915-3	7.7246639627741	0	1.37188394597547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83676673-5	15.6888142452732	-4.77429899098209	0.999981899459998	-4.77438540993619	1.8025688396009e-06	0.00020759711769463	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16805735460733	0.303163067301871
Merged-chr14-46767530-7	39.4278854364281	-1.75832725075678	0.386479388863825	-4.54960161245837	5.37475752678338e-06	0.000529287036953655	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30538422335108	4.40946205434521
Merged-chr9-104581718-3	12.6071256304096	-0.0563396261271497	0.590545796985952	-0.0954026367043807	0.92399502184571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72023112727297	3.61496481966691
Merged-chr13-44538434-8	30.7958520812929	0.249408972048751	0.452116086243745	0.551648082511025	0.581189486716589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23360625785115	4.63345200892066
Merged-chr6-22391110-2	6.32442233388938	0	1.36945932028844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89095087-3	7.94243447262557	1.90964822848128	0.920584547140904	2.07438657797608	0.0380434228460342	0.492264323372429	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	2.87145664158156
Merged-chr16-78200280-4	6.63364353051104	0	1.3492027664058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28057157-4	6.27149525355207	0	1.35942658621248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134743841-2	6.58857410700915	-0.349044215795371	1.01402871883676	-0.344215315909175	0.730684364875057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42539729206526	0.990331813111976
Merged-chr13-112366021-7	25.5815435533264	-1.04151812291607	0.392091398695228	-2.65631464087698	0.00789998674219882	0.171226227798718	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98918947027181	4.00257717084382
Merged-chr12-69417838-1	6.62203552166045	-0.04989424248036	0.763362901933638	-0.0653611045991039	0.947886491862831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68431722122931	3.13246411041567
Merged-chr10-116996380-3	5.98951030763411	0	1.37303475922374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64852895-3	7.78718133878067	0	1.35532062382541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95603082-4	5.5659659714531	0	1.37009748145145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85284068-4	7.86562667846165	0	1.36571822161869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97557147-4	5.8232618030587	0	1.37937507506687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96546858-5	22.5022587541328	-1.76943222729184	0.473779573238392	-3.73471615755268	0.000187927020771067	0.00984154616772101	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04175131845771	4.09002851296197
Merged-chr14-122376848-4	11.0949705986227	0	1.34220735827488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91480988-2	4.23112179040528	0	1.38318777832961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52000234-4	13.6689113379342	0	1.36281579503048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38320773-2	4.2788297425926	0	1.38662373078681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34072226-6	22.099003031229	1.40082847596442	0.520946664004281	2.68900555998743	0.00716652255465131	0.159136029227243	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20308289405506	4.51356372004721
Merged-chr5-122274923-4	9.16845129079888	0	1.35760341490697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46152589-3	5.37440215433208	0	1.37913450436392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35452531-3	7.53430405580283	0	1.39188479945178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103924302-4	10.6464429598806	0	1.34110832600249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91411042-3	6.03906840817188	0	1.4244136251092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79982559-2	4.41900148852888	0	1.39137585269948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156471316-8	30.0100690466619	-0.00801315303955893	0.316033109101468	-0.0253554226085412	0.979771467269938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75989933466086	4.85796943638292
Merged-chr2-29466609-4	6.39564908926092	0	1.35889109820002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41086906-3	5.88070313049217	0	1.36559254668188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-22081211-4	19.6935982207961	1.74846287232418	0.517960719034881	3.37566693393681	0.000736370045084364	0.0284656436881011	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78805646911168	4.39797388370353
Merged-chrX-106131558-3	8.0866347867737	-4.10314013813221	1.10408584894401	-3.71632345623902	0.000202142770156229	0.0104950132215114	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49632546760905	0
Merged-chr15-51951694-3	10.160805951019	0	1.3559320927837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-63689217-1	2.16523468771839	0	1.55090009729397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11351823-3	8.25450645993901	0	1.36040886327431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135429125-1	2.08900332132863	0	1.63330691254173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24493894-2	3.63607237235123	0	1.56486244166593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105567916-1	2.43516651557631	0	1.51519691520848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104079581-1	2.84887585527932	0	1.44561739980263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119102378-2	1.9603000622659	0	1.66997882574773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92009306-1	3.75251152783443	-2.22584591310643	1.36527124320901	-1.63033237840319	0.10303126794435	0.92895616092004	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	0
Merged-chr14-93757968-1	2.5520358283646	2.50069489207899	1.26635927365429	1.97471203007249	0.0483008369422332	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.837303648891292
Merged-chr4-66841699-1	4.80080163328859	-0.942835739947842	1.12055321824049	-0.841402018753107	0.400122754926426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09713636225241	1.45974840815227
Merged-chr9-3015310-2	4.66624409738438	0	1.44254235450924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115069785-2	2.68762722576145	0	1.48940309270299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122010594-4	10.2779066152174	0	1.35783643788101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14175713-1	2.53758385780762	0	1.48068132760817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-91308118-3	4.28591929728906	0	1.36922625939955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20307833-2	3.70847954932851	0	1.39804682227609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78215911-3	10.30997484629	0	1.38332918541178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120362899-2	4.63234231008899	-0.297059361587503	0.845592682239745	-0.351303136636275	0.725360942031627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62235589016187	1.5682414637086
Merged-chr16-15569394-1	2.17874923680918	0	1.46144303780381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8223171-2	2.20351297709361	0	1.48870454132994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94225217-1	2.5253275114155	-1.11138077314989	1.23826187514905	-0.897532901120864	0.369434625275902	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.39303987690739	0.765562747387088
Merged-chr3-8631999-4	8.79299658429636	0	1.36782023195223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32089787-4	9.01913624132577	0	1.3505192294782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8913304-4	7.87707494816517	0	1.35680367288304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-13046315-4	6.63027090065351	0	1.36331616052054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-18009345-4	7.27855407295958	0	1.36945740833055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70091970-3	8.03376462757802	0	1.36217405665346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70426710-8	24.672518595087	-0.226928098366897	0.386058616159647	-0.587807366208491	0.556661599150545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6258160331536	4.36997853204393
Merged-chr19-18624072-4	6.33214383508493	0	1.36023821556368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4136099-4	5.78237905630329	0	1.37448650736668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32487346-3	6.12189940087206	0	1.37597355302656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99581274-4	8.01179702419893	0	1.34751295399566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40459120-4	7.36121581104096	0	1.35274417790628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93014648-4	6.48513768988103	0	1.35724493343919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54844609-3	7.40256928027159	0	1.35009181777091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69199901-9	26.5493191981262	-0.982922983962929	0.472686044687889	-2.079441513049	0.0375767882572443	0.488493508044166	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84836099264139	2.56855692027299
Merged-chr4-37412961-4	8.49078186559603	0	1.34976055080097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58282732-4	6.70790932763203	0	1.36838824949549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104035445-4	6.13166692150012	0.586324962627314	0.972926499780809	0.602640551736855	0.54674783724679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.44790810950236
Merged-chr17-81703938-2	4.81022084958971	0	1.38598182740039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17624357-6	16.9315080409187	-0.395890660261172	0.537399025824947	-0.736679155034662	0.461317486077018	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85160255630828	3.09861907955327
Merged-chr11-46096902-3	7.3881171198436	0	1.39693720810024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4079412-3	5.23219206366067	0	1.37154560068145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4777054-4	6.35084479794076	0	1.36135582642108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123661772-4	7.07433208723006	0	1.35320468705706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72183968-7	30.5958490948378	-0.180783943371709	0.321949993619603	-0.561528022843548	0.574437632388321	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79300949514357	4.53195780291032
Merged-chr13-75824739-6	18.7549089474002	0.149359584883768	0.661195678083867	0.225893165721544	0.821284513418508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7458187106501	2.59701010772379
Merged-chr12-119313185-2	3.92957525299644	0	1.42558583044856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8067079-7	20.5295511410106	-0.433597441881058	0.489631271905924	-0.885559127367927	0.375855144635406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02519664859839	2.98763211668892
Merged-chr6-28621703-2	4.37361396326653	0	1.40369974160284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84646491-2	4.60182129807425	0	1.40555117697838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70008009-3	6.27746999973162	-2.44981457495924	1.22478324264003	-2.00020255802867	0.0454783957188965	0.553799308441643	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0
Merged-chr12-39039941-4	11.8310824061093	0	1.37559208105342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94828564-4	10.676150488408	0	1.35351926747029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10172482-2	4.89986537275063	0	1.43387528870571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96599092-2	3.50957380734086	0	1.4018757013434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177737693-4	9.90592066508551	0	1.34546093009086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118959875-7	45.0829445254613	1.97889438242024	0.362239786066769	5.46294045694773	4.68311715958252e-08	8.87001971002599e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58018435977799	5.52713755158265
Merged-chr4-88409479-6	20.3091032116589	-0.488525059107973	0.516580080939565	-0.945690856332352	0.344306287564217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.830212281623	2.84522948505514
Merged-chr2-180045526-3	5.57161785201028	0	1.35319805962406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99065860-4	12.3029408886839	0	1.39833931196503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40722941-2	11.8173753913098	0.52758398125409	0.53083970318435	0.993866845470055	0.320287697366411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20613844154895	3.8030833714597
Merged-chrX-12714034-4	7.75970119657432	0	1.36222226124369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24971492-8	24.5842449538991	-0.607108422499627	0.379433412154191	-1.60003943525383	0.109589835292566	0.963782926405866	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53450481980477	3.61053927703223
Merged-chr2-170351783-4	6.11354930731263	0	1.38426577733109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43114124-3	3.72027696218712	0	1.47793424645928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128408718-3	10.4979370239198	0	1.37355848108747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127248749-4	6.40307784919771	0	1.36090897792453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186221841-1	2.65814340239468	0	1.514512403214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4505024-3	3.83221728453787	0	1.42030558359914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36960310-3	4.17017744382935	0	1.41453536511812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47445569-3	7.66209016648202	0	1.41716691742311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-11277403-1	2.9006414841982	0.586022032640239	1.43671068243823	0.407891470289416	0.683353355231803	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.67591700901439
Merged-chr1-36569057-2	4.63431322753291	0	1.40408628686158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128465806-2	6.35100184835496	-0.69335746609008	1.39235147064873	-0.497975892370788	0.618501034157046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr11-34770712-4	6.59189793520655	0	1.35137448506555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106561578-4	7.37801362840576	0	1.36985954167547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32745935-2	4.41640483399113	0	1.40777937814965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115149082-6	26.8166130677322	1.75416420733728	0.46928803085719	3.73792658664907	0.000185544103699828	0.00975434422922528	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13134338926628	5.4671943341294
Merged-chr14-102929747-2	4.56709093554872	0	1.3639874404845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81616599-4	8.0046476477561	0	1.37928176673659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36132117-8	22.2376216959545	-0.852318549083344	0.392975993882402	-2.16888197333092	0.0300916456683029	0.423769887793595	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99718310193999	4.17405253424934
Merged-chr12-110817004-4	6.49873421953675	0	1.36319204240544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13596123-5	14.4030439269075	0	1.34832566737343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64941710-4	7.10981072965106	0	1.37530755968678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-16210143-4	10.9641378324255	0	1.3625979367736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20825165-5	18.566918040783	-0.0647225308579463	0.522649287684665	-0.123835490419717	0.901445530790584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58322417156471	3.30282580461273
Merged-chr6-120903702-5	18.2343972075536	-0.886364098418403	0.560011084752759	-1.58276170338615	0.11347578854224	0.983330207136558	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78249376271719	2.37618163600509
Merged-chr4-139285694-2	9.07477758100898	0.668689359977582	0.796707250968126	0.839316272275692	0.401291854270867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24517178646815	4.47745492492644
Merged-chr11-101964028-2	6.22594524467773	0	1.36449245191076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57611884-2	4.45413260848592	0	1.39242843527965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94348137-2	3.80020540712235	0	1.3872595515734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17676623-4	9.88391782431358	0.840098823007271	1.15881656696138	0.724962730909311	0.468474894662063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.97908007631626
Merged-chr2-122153033-6	17.411833204542	0.533963143443011	0.424431194676488	1.25806762118419	0.208367301964193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56598171644645	4.34268012376741
Merged-chr15-33265884-2	3.93587223767235	0	1.40695712612997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95188223-2	2.64796442337542	0	1.47245646042707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87378488-1	3.00102134437994	0	1.42666663700227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19777077-4	9.41157125653351	0	1.35089654518339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60904712-2	5.63087690899754	-0.437899138517632	0.929051735659799	-0.471339885293516	0.637398037290935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.48029254815892
Merged-chr1-132135818-1	4.19590002742606	0	1.37534906523202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13581516-1	4.04256542458568	0.958974226445334	0.994918175083454	0.963872457516313	0.335109873960534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.45451904642141
Merged-chr11-117358416-4	7.63916090663038	0	1.37417822128949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32773979-4	8.19960521614606	0	1.34957711211153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139615422-3	8.81743125884445	1.44937886341409	0.807907409411827	1.79399129965805	0.0728145575223192	0.750056485711688	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	1.94177129634429
Merged-chr7-90039560-6	73.1372181245065	-0.474353647674771	0.38854202938293	-1.22085543339578	0.222140760997172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87475754929496	3.84880349166127
Merged-chr15-25364226-3	8.20742659525985	0	1.35185428828165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95507396-5	20.0313477494425	-0.11077311862405	0.647146834225504	-0.171171537533087	0.864088886933671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48081072411233	2.645423773721
Merged-chr3-61407111-4	10.4636964736194	0	1.3528552163459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-65019042-7	15.8194599497318	1.13626876646967	0.581693583085481	1.95338026670769	0.0507745527276665	0.595107197237079	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94640134381309	3.57323592486957
Merged-chr1-171457785-2	4.33318626264068	0	1.44465658740398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31082544-5	17.8281237898346	0.632278989876726	0.451234618030146	1.40122004077818	0.161148283170075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94324599103455	4.76329639938799
Merged-chr4-101652920-3	12.07106833723	-0.32425880638453	0.603168813347078	-0.537592128785916	0.590858665541298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53689671782254	3.27939671675291
Merged-chr12-104243322-2	9.67871442931288	-0.0547277680063363	1.1973122088057	-0.0457088532162605	0.963542307340296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	0.904676873936758
Merged-chrX-160114913-2	4.86607895515278	0	1.40033149319715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46087065-6	20.953181289406	0.0661487224661472	0.480405394180664	0.137693546466031	0.89048261999073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76097956172694	3.64233268289789
Merged-chr2-29130306-1	3.38024094769821	0	1.43938589544428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30530313-3	8.46338129210619	0	1.35827875661987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171466232-3	10.5531252731002	-0.353584981462503	0.745430656904168	-0.474336517002091	0.635259955070207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38225544844175	1.67285245412069
Merged-chr3-116483495-1	3.89111552075288	0	1.40356795459911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125518519-8	22.3110689336326	-0.129163244801882	0.381633294038257	-0.338448575686727	0.735025173468609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68609441433328	4.53905404968955
Merged-chr1-156467914-12	42.5666194292843	0.169375935418218	0.303225370752645	0.558581015163094	0.576447699633469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06892202511722	5.16103563419155
Merged-chr5-90909162-7	17.2059262287431	-0.410618116013609	0.506662656554637	-0.810436906492888	0.417689113504652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7980416176449	2.78251915825082
Merged-chr5-117494424-12	36.2496668863304	-0.492195161296959	0.294579231734067	-1.67084135021878	0.0947530185819422	0.879921072699026	C57BL6J_F1_Control-BALBCJ_F1_Control	6.05856706747759	5.46717319474483
Merged-chr10-91141732-4	8.42005361284331	0	1.36107262814443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136554956-4	8.75398639857904	-0.247003063908259	0.723971211823373	-0.341178019062615	0.732969569861216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45226920948466	1.91536688454183
Merged-chr11-58239362-2	13.1180995460717	0.65485100784958	0.51624224432543	1.26849558525624	0.204621026288106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07578631856332	3.79064234396062
Merged-chr4-32343411-4	11.2700788535509	0	1.39623025043745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93757691-4	12.7708971480364	0	1.34522499829557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80044420-4	11.1255079765844	-0.0360518765683	0.861332592656936	-0.0418559298413304	0.966613548478428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.30064958020929
Merged-chr8-122941211-3	7.22291590427598	0.452052181440979	0.721506573727935	0.626539241500298	0.530961306314663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.27857590116594
Merged-chr1-62720958-4	7.55015427949335	0	1.34503462252874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75564763-5	16.7273964389547	-0.438120010539853	0.391853439290447	-1.11807111182483	0.263536623206834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35572059606503	4.92765923216623
Merged-chr14-66847262-5	24.990647532049	0.828761536641406	0.526468439093557	1.57419035045732	0.115443449522582	0.992339900195579	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77563725447445	3.88463659576341
Merged-chr15-59525206-4	8.72122691736923	0	1.383783448056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20982214-4	6.80419222457661	0	1.34944441968141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3276009-4	8.95952255569842	0	1.35343160721488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94707792-7	33.5981867491208	0.522388650941815	0.39133081208334	1.33490293841356	0.181908115947771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86214131438257	4.25588492194583
Merged-chr3-98033401-1	3.88089051150294	0	1.45395567319615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96588821-3	6.99932419797688	0	1.39199354897275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61499325-4	6.58367949573857	0	1.35134836097741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109196347-4	7.65667839652857	0	1.37091875315201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-54513621-3	4.93326658341306	0	1.40700777894007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24399731-2	6.04300002017166	0	1.38880956304308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9821414-2	3.22059162181049	0	1.39290945085857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-42859487-2	4.81415885991848	0	1.42302496201231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83169922-6	21.7112827287488	-0.560441142067765	0.436840487670842	-1.28294230476653	0.199512290082864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33914170343859	4.85519006236564
Merged-chr12-21426759-5	28.516244340438	0.0515532788657334	0.429208108944268	0.120112546318242	0.904393993821928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02939695958018	4.10838233081641
Merged-chr18-80169200-6	15.1966511268459	-0.0380043720900562	0.477892318759497	-0.0795249695343652	0.936615071687364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39175518804656	3.35786636970151
Merged-chr2-35451816-4	8.79672671075515	0	1.35933432546778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99199742-2	3.85429454327804	0	1.3956124890654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67620222-4	6.31036315273564	0	1.37793262011136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28584094-4	6.73309534083147	0	1.34941864815953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128806816-7	36.0115011163367	-1.37623912795589	0.401107951683789	-3.43109410366624	0.000601152021525676	0.0246265235067455	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66636422789945	3.17850809481811
Merged-chr1-127222411-5	10.5703712315684	0	1.34711322006315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79581280-1	2.92591962100453	-0.106525757001599	1.30867758298835	-0.0813995428563455	0.935124212653732	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.67591700901439
Merged-chr14-69994977-2	2.781468689965	0	1.62535380295599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59465429-1	4.99054776530732	1.09638725625281	0.934158353279717	1.17366317220579	0.240529966964721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	1.97731223551783
Merged-chrX-155702225-2	3.98916632761303	0	1.42914099285422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86723773-1	3.7985190014695	-3.35132176605796	1.16151576213724	-2.88530029062316	0.00391040473227327	0.103488651821637	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69023326152005	0
Merged-chr10-121263712-3	9.36812241384254	-1.14461244920759	0.666129473951424	-1.71830326380523	0.0857413143742557	0.826385125544356	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96635671870578	1.99125538440942
Merged-chr15-4000780-3	5.2161044631188	0	1.41078967850064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58530611-4	8.33586620236609	0	1.3800133052474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-23858236-1	1.64309235665472	0	1.68345354491369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168087147-1	1.25465064149059	0	1.83677481504355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110890076-2	5.9699411859018	0	1.3659408755592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17490455-1	1.54859947088635	0	1.73935379639232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-13496646-1	2.30061669771569	0	1.63905301841524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62936392-2	3.26786370453093	0	1.48664232090697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131423032-4	10.9982308038242	0	1.3654802533853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30197050-3	4.06732670889461	0	1.42127340969907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183553361-1	2.79013816505552	0	1.44606982039974	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100588650-2	4.34412962370421	0	1.39895640787929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100598050-1	3.37744104550443	0	1.39980198847022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9082012-1	4.73282174918031	0	1.38029057393791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34534444-1	3.41889210049666	0	1.40082241545824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136979942-2	3.28707845348498	-1.32327354976349	1.34574850977664	-0.983299286716749	0.325460161081637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0
Merged-chr13-96011357-8	41.1218693905656	0.349366143605732	0.526932941686774	0.663018224837813	0.507318881952654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03726556645302	3.92904455540558
Merged-chr3-79128933-2	4.67566666185497	0	1.39199910065571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149875630-9	38.6209877191128	1.06486525863868	0.433484274609296	2.45652569426758	0.0140287769608668	0.25481202927182	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8649984047419	4.94862929206817
Merged-chr5-113841998-7	26.6277150139165	0.584094669184717	0.414621777823689	1.40874093071178	0.158911787219338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75083873268411	4.33207657119284
Merged-chr7-65705027-9	40.1492850756004	-0.0989745701048904	0.292832432479968	-0.337990465286529	0.735370373006703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9446962103411	5.75614369313634
Merged-chr8-85515504-7	34.6412907123962	0.850261831539874	0.490079249089852	1.73494762963119	0.0827500816936747	0.810488592934498	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29818555030384	3.9666969426151
Merged-chr16-24637989-4	6.61088111520347	0	1.37586384657033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119965145-6	23.3760746037476	-0.634379119876526	0.512293378727005	-1.23831215904623	0.215600337036464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17303644634375	3.22264544638805
Merged-chr8-123280760-12	57.2844509315913	1.7006777176271	0.305295714990457	5.57059150889248	2.53875930267996e-08	5.28752555304138e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13522233010345	6.05750975498943
Merged-chr1-106395689-4	6.92179143932383	0	1.37139560779659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10965184-11	52.8098936071289	-0.204609501899374	0.281548649006465	-0.726728764714034	0.467392128741278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43953989712027	5.02630031616699
Merged-chr4-62308591-4	7.33592007702254	0	1.3696271830413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24426388-4	10.754765531203	0	1.34456413367497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-45899932-4	9.21646810191318	0	1.35169966258966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90292405-4	6.70734869464989	0	1.3617654688465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43260892-4	9.38013898101356	0	1.36045606737888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123034328-2	5.50464068966186	0	1.35206349131706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27302887-4	6.55585263607353	0	1.35996007306553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131394696-3	4.34792962726882	0	1.38391490746406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47909413-6	9.94486216497928	-0.400576086818938	0.720414117844451	-0.556035864507348	0.578186337476365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50442746498371	2.37729643579091
Merged-chr14-115017859-3	5.95514195928252	0	1.376703414686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136322761-8	26.7541667688597	0.33330907843672	0.436537265528294	0.763529496235222	0.445147678255089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13892945504148	4.49862878091746
Merged-chr6-88030617-4	7.9205858087313	0	1.36636452632874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101506944-4	12.0410227516788	-0.376020947275762	0.550961820377761	-0.682480951253478	0.494934883722913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8115029542486	3.82886660855092
Merged-chr13-59889928-2	7.88275623792488	0.312465965602771	0.656266278502146	0.476126803766208	0.633984042340557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11413112565287	3.01345289358988
Merged-chr4-33497505-3	6.00399384696823	0	1.3989519134336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97511100-3	9.2110246130283	-2.44071335646439	1.03725242816272	-2.35305629584076	0.0186198148748365	0.305141548622621	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35712517876146	0.600815099743027
Merged-chr7-102032645-3	4.40797218705867	0	1.39536393297341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103655791-6	15.76794569781	-0.664070056904587	0.496898651501954	-1.33642958156021	0.181408902813848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74609606790233	3.11195098609714
Merged-chr4-8515627-4	7.83659622381753	0	1.36358398919416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116194153-3	9.95642297924154	0.829275750119355	0.695649565504395	1.19208836063611	0.233226600368665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50724812564465	2.7127475668842
Merged-chr4-149705583-7	25.733807224156	-0.484245830831553	0.413587170606951	-1.17084345271375	0.241661708090463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05892347084693	3.60503485935643
Merged-chr7-129859825-2	4.03712299102361	0	1.51091484411666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122814384-4	5.17926665282187	0	1.39208828193281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85587935-4	11.7174705315871	4.91252129116564	0.972155205405099	5.05322736930527	4.34406239338222e-07	6.13347760108739e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	4.80490148452947
Merged-chr7-67426292-5	18.5816626231394	-0.0246174296356293	0.569896261915717	-0.043196334632688	0.965545026902697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25293273556824	2.53762773742618
Merged-chr12-32147042-4	15.3782576867641	0.894238609127491	1.0119626763742	0.883667579847405	0.376875686279745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.30139522650344
Merged-chr19-45581465-3	5.03691285818369	0	1.37785089570369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10093649-3	7.23162557217866	0	1.38153449954565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42108199-1	4.6673949818463	-0.82409173178195	0.998467585216888	-0.825356520315018	0.409169212076817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	0.990919527803163
Merged-chr13-8645911-3	6.89021028276776	0	1.39557303878333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145291578-5	11.3790041475563	-1.01151057547552	0.707011141140333	-1.43068548233068	0.152520375815861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39487633519123	1.33245162145219
Merged-chr7-101310881-8	53.8685341810982	0.217058552294413	0.362364601633472	0.599005949576624	0.54916891710823	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73313563957629	4.97641015281376
Merged-chr13-25854659-4	6.97054341784646	0	1.37391142955972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51405352-4	6.55215988089792	0	1.35905220691142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79288287-8	25.0892196740551	-0.040596985145545	0.314311426518636	-0.12916165853467	0.897229734080338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86956637276247	4.81047660855006
Merged-chr18-8678057-8	23.0825467798605	0.273336276530558	0.45359502545673	0.602599810823173	0.546774946251331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52584428201732	4.76299099884742
Merged-chr5-146677002-1	9.14291607857226	1.35691169829468	0.784438296932625	1.72978767558977	0.0836682171881153	0.816245624215499	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	2.58467386760829
Merged-chr13-98027863-4	13.5469262195042	-0.405386214854376	0.746913206837521	-0.542748757343317	0.587302798971102	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69486619385668	1.75107117680423
Merged-chr1-88573745-3	8.87453041240109	0	1.34490363836294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138582407-3	5.81439003272271	0	1.40415376175166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92934455-7	39.5190272185836	1.88518399100168	0.312751301312506	6.02774147730235	1.66266722175784e-09	4.56469330846134e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20793767206139	6.12712462390505
Merged-chr3-65442433-3	8.54804299431879	0	1.39092332359267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-57244317-1	3.07312199444061	0	1.41941761539334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102615302-3	10.0017583196054	5.7166821131485	1.00122525134501	5.70968631231476	1.13184591964388e-08	2.57940469538788e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	0	4.54018361769893
Merged-chr12-38761528-3	21.8510751883853	3.3687535395282	0.748067358303957	4.50327567716087	6.69139928439068e-06	0.000630394755112986	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	4.4050661376903
Merged-chr6-29247989-3	5.5418530100723	0	1.37404879329024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36684899-3	7.45162262985232	0	1.40935127182358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36357390-4	10.1961839531343	0	1.38007423276063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51529869-4	9.78633815323373	0	1.35400850407938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35287733-6	13.0012250133111	-0.247242703161792	0.532522892062277	-0.464285586304668	0.642443149354779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43726270250954	2.74179653896849
Merged-chr4-141161641-4	8.29441347285901	0	1.38018414096945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131894561-5	19.5925112023931	0.654690559656486	0.445902719305095	1.46823630202743	0.142040046608292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74636673277224	4.33039212715985
Merged-chr4-35164520-4	8.40436449487857	0	1.37023643567661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34267894-3	3.93654571787931	0	1.37752484245416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152463604-3	9.79456267411776	0.194188566786338	0.678387584358252	0.286250178015917	0.774686514326136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83134494660963	2.48670850296514
Merged-chr2-72373816-3	8.1742973154745	0	1.36493395373166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36854188-5	13.2405958812488	0	1.34745488303788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-61659312-3	7.50875330535466	0	1.3672834763306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72093402-1	1.94989026715854	0	1.5089464333026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14145270-2	10.2541719790315	0.300349759612482	0.76143670537788	0.394451380516817	0.693247816081999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28429171194563	1.77005307716183
Merged-chr8-70701494-2	10.14516662021	0.0150408610818248	0.682740008202675	0.0220301445661873	0.982423909482553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51871067803438	2.37057512210999
Merged-chr10-22059595-4	18.3544548866699	2.31933541950397	0.511272656129166	4.5363963663999	5.72235883662713e-06	0.000558459073609002	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37528155229931	4.85450276271766
Merged-chr11-94378155-2	3.59849728595324	0.615357877202187	1.35022284493255	0.455745419736937	0.648573056682598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.600815099743027
Merged-chr11-116146266-4	12.4247526658481	1.26406987310676	1.31069336471005	0.964428375958395	0.33483120146812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr2-174393613-2	2.62508686426673	0	1.56590351614944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21962505-4	11.6213293388438	0	1.36036262827847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27876587-4	8.51980039805552	0	1.35933570032373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44833353-3	5.20780968310095	0	1.41436013479248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134729004-4	9.87962455086738	0	1.35333399021597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45538731-12	52.3616478850541	-1.16207302134899	0.265118465379094	-4.38322174084454	1.16936981472883e-05	0.00100141851045431	C57BL6J_F1_Control-BALBCJ_F1_Control	6.32735621281514	5.1637576958286
Merged-chr12-25299741-4	18.9276213037279	2.7486057492266	0.800149257563779	3.43511629017229	0.000592299598477452	0.0244100180997997	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	3.4957450778133
Merged-chr2-43545871-4	11.6389420111241	0	1.36882542541095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114742423-4	11.2689459537973	0	1.34806683519924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100893601-4	6.96915633159066	0	1.35290261437572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30717435-4	8.2981458667348	0	1.3445118648795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153496545-4	8.56032621874463	0	1.35702268924938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105483435-4	18.503182582598	0.417904478603332	0.527498196036651	0.792238687721116	0.428221514304291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32450051613382	3.81747572996216
Merged-chr4-134087607-3	10.5998458360878	1.30971503766085	0.614561699886895	2.13113677260053	0.0330778760392033	0.451124214626007	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91160626283417	3.25323039701534
Merged-chr2-160070595-12	78.0335673392361	0.370546932263038	0.221091182601821	1.6759914524967	0.0937398668638949	0.874181750361034	C57BL6J_F1_Control-BALBCJ_F1_Control	6.36974381439297	6.73368053284461
Merged-chr18-12655259-4	8.04907466152627	0	1.36056964061754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106090989-4	7.59782839234161	0	1.35743558595682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79380645-7	30.0277676184457	0.897848944266772	0.322837279513275	2.7811191620138	0.00541718488615363	0.13093497253287	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03601922214011	5.97702448158953
Merged-chr19-34206340-3	7.22491364626014	0	1.36278557334862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118564166-3	9.18078215955994	2.34823219672685	0.808034182590619	2.90610502293138	0.00365958596230644	0.0987694657368698	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	4.07910862770255
Merged-chrX-106044172-3	8.70223673356041	0	1.3568651221339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64128102-1	2.81698762629949	0	1.39858835697925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-116513439-4	7.22908612551605	0	1.3730256732416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45252591-3	8.08008651736116	-1.12902206469274	0.822670869370097	-1.37238609841285	0.169943275424897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21876556887267	2.58570474182386
Merged-chr16-58480373-3	8.87532076088263	0	1.36524547922469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101719481-4	12.3341888365388	0	1.34937439995549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30224724-4	11.319675726021	0.122781448309936	0.640061984889997	0.191827434230511	0.847877380615577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1639482234215	1.83064801361452
Merged-chr9-118867993-8	42.3766784064016	-0.0718315509386249	0.383847333906322	-0.187135729738207	0.851554214689061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92523575448566	5.94190607160885
Merged-chr1-87638374-4	8.0949286175206	0	1.35541198387353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125541127-7	27.9947394797909	-0.897474201026703	0.384165479740539	-2.33616565869699	0.0194826093577314	0.314443886484095	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70777968202803	3.73769120669667
Merged-chr9-111562816-9	36.250575972362	0.25729557798744	0.307759820472044	0.836027190270644	0.403139606794053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96733348751529	5.24707792598231
Merged-chr10-117323978-4	10.5401869690711	0	1.34871989142738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88231324-4	6.8373613989955	0	1.35611581710499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108203206-4	6.89641942456981	0	1.36182960240686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37127133-4	9.13419941724006	0	1.38442218481228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87499100-14	55.6463922262612	0.693701782316913	0.266274745478063	2.60521057328009	0.0091817810775167	0.189560363688846	C57BL6J_F1_Control-BALBCJ_F1_Control	6.02672210449284	6.7398153310039
Merged-chr14-13995712-3	13.7432988637958	-0.347680096046738	0.632889144433104	-0.549353862528587	0.582762630053096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04789201217784	2.61177357084289
Merged-chr5-32930942-6	18.5839433788682	0.270252081404311	0.461637520779924	0.585420528530106	0.558264988725443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88950066571865	4.16861557045741
Merged-chr10-7076351-4	7.27072129890257	0	1.35690729958297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70709366-3	12.6189639910474	-1.97513466343619	0.65520426316332	-3.01453268008401	0.00257375481750894	0.0753807856276769	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83877731428182	1.77648133604788
Merged-chr10-92112232-1	5.27233718053124	-3.46835223201054	1.36682053071323	-2.53753302213035	0.0111636835504929	0.216190478846186	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47934711566824	0
Merged-chr6-128107963-3	9.93147847314891	-0.709408255346367	0.767951171844448	-0.923767397401746	0.355607433100144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42775089836225	1.51301315377886
Merged-chr1-177188935-3	4.60760324264562	0	1.4051349250546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52954600-2	3.78094833847119	0	1.43300329529181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55282528-4	12.1305526902003	5.96556902137835	1.00898976089168	5.912417799073	3.37122100068538e-09	8.68512807470411e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	0	4.75064742165943
Merged-chr2-59522223-4	6.65666068391045	0	1.35969498834219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-127043647-4	11.6889436307022	0	1.34392486045734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57339735-5	15.6489427370354	0.0590234581392645	0.4441996788519	0.132875958604516	0.894291480536291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78702261309498	3.81404432140633
Merged-chr6-116228964-2	4.20286254043278	0	1.41775101573405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181888991-4	10.965877469239	0	1.35088321964088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143948169-3	8.99843545343717	0	1.3875574669749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78860719-6	23.3247574125938	-1.61788201318918	0.546341278744391	-2.9613029000983	0.00306340498521438	0.0863913073332229	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77900401633808	3.22781025516954
Merged-chr11-47398041-4	10.4245888427842	0	1.3585098259545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71328997-4	6.53373444708479	0	1.35550733774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83095050-4	9.68414873637035	0	1.35775449867373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47638764-4	10.9799819142298	0.620784440576496	1.40491417380428	0.441866451454121	0.658585848679012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr17-51398163-4	6.2314538187053	0	1.37331991545751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56459068-4	10.4503433338811	0	1.34623018832148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59878239-1	3.24797199172264	0	1.4357918329439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32681072-3	5.73198606413978	0	1.37464111767065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118097605-1	3.88101109981225	0.551192055364879	1.15721957481264	0.476307234479782	0.633855512105694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13132003301738	1.90216338684418
Merged-chr11-80148374-2	2.49311785934824	0	1.45245228513085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-92642156-1	2.70303934902504	2.14078572437113	1.29606707691764	1.65175534700136	0.0985844348124267	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	2.82424523690178
Merged-chr9-118666600-2	8.63876295344576	0	1.35253256990087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-97241621-4	6.02223593998232	0	1.37703149282885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151841937-2	4.08330015041537	0	1.40177377938208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64448171-3	8.16899797994095	0	1.35064795033049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37342526-1	2.64340481022903	0	1.43231613249761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166973422-1	4.15730104007074	0	1.43574866378604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9505566-1	2.25387474066472	0	1.55238122561877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146807216-1	6.13021512582435	-0.520558715059664	0.732722960753006	-0.710444114545961	0.477428775039689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41780873583481	3.68821031084451
Merged-chr7-38214801-3	6.29129316925223	-0.0353178371610105	1.13046853294224	-0.0312417693476967	0.975076729036674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	0.977057525713991
Merged-chrX-17566570-2	3.7164998909688	0	1.4461238628079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60898908-3	9.23112604184731	0	1.38138340031433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-84537929-1	2.88169313035816	2.6990011685949	1.40245854724253	1.92447839110938	0.0542946467653288	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.58059388295115
Merged-chr3-135635786-1	2.1644403169636	0	1.47010742123857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80846548-1	2.02100045590479	0	1.46677135960343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76311836-1	2.29360915305809	0	1.45165854919597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57707398-3	7.85223309647662	0	1.38741425962307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160246103-2	6.56664703758536	0.875279311412834	0.835931999415957	1.04706999136816	0.295067298462724	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	2.10096446834979
Merged-chr16-45736042-1	3.57567958624614	-2.69408467312253	1.01640071146641	-2.65061273839098	0.0080345907539993	0.17324566394155	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58132906412137	0.662147012823607
Merged-chr5-3502310-2	6.77779617837466	0	1.36525314074597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55964186-4	10.4069006189791	0	1.36030327504776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119238410-5	10.3805592283294	0	1.34662221358598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42864706-4	12.6814055522057	1.21489697360396	0.972050623252314	1.24982891275675	0.211362051873749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11145969726662	1.4068548238317
Merged-chr17-10371581-2	5.33117209299352	0	1.36748303746934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105553031-4	5.79022641671776	0	1.3701317409077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4197210-4	7.76992191827188	0	1.34913254456179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13817938-2	4.42036991839549	0	1.45724572988749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75798573-6	30.7167065417044	-0.853726916885446	0.544896353200192	-1.56676937159055	0.117168608982035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6338439514538	2.49928382459331
Merged-chr8-61911011-3	9.68740691271051	0	1.34400199163232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71289144-15	87.8386489955071	-0.021266837596596	0.255673646513894	-0.0831796232680569	0.933708714860051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2978205624585	6.27634072421518
Merged-chr6-28486597-4	6.67590813379436	0	1.36751393581504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97752445-3	6.76844961551908	0	1.35185728547226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11107448-1	5.18011792108152	0	1.41045375030687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86539600-3	7.15653645626394	0	1.37294828100282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121992826-5	20.1145109198465	2.52907527689138	0.52504792811379	4.81684650385529	1.45844793326617e-06	0.000175397723903575	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3697525094638	5.1552840981867
Merged-chr1-144245057-4	10.8807002545567	0	1.34832144134443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122629767-4	11.6707191028413	1.11654143724959	0.723805605940443	1.54259849341573	0.12292822381441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98376133073541	3.33712439280187
Merged-chr19-46648089-6	19.906047514851	0.0332177156117625	0.474267460326012	0.0700400478433174	0.944161784318158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36120575757701	3.49258324514321
Merged-chr4-141642277-5	17.9640446740094	1.57885939248785	0.466176316799068	3.38682883619841	0.000707054853966231	0.0278311330968503	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22624040516186	5.0490490928372
Merged-chr1-180215247-4	5.38768071432809	0	1.36461066813604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57259946-4	7.17657164516856	-0.770049092899976	0.905657037645595	-0.850265675516469	0.39517739536745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	1.08976818821237
Merged-chr4-132805610-5	10.5257526091762	0	1.34837443986418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145829629-4	4.98155755357077	0	1.45229120942525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24069107-8	29.9986079169795	0.01915110981604	0.413858809430756	0.046274500819208	0.963091462930082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98172759393652	4.05517787238886
Merged-chr19-32954411-3	5.62798481360953	0	1.365064464814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125342361-3	7.85597618741193	-0.0505388324364757	0.820505494989297	-0.0615947519487788	0.950885556346904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	1.70340695421451
Merged-chr13-43512916-4	11.7112817908863	-1.12711145486273	0.579872115152801	-1.94372418574693	0.0519287204438113	0.605100388982881	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51981813645997	2.37902766497761
Merged-chr4-133155432-1	4.86459100069816	1.23009132126032	1.21935184632724	1.0088075275118	0.31306695027808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.788686275880602
Merged-chr16-56646996-8	30.5294450472575	-0.834480715504572	0.35307810032813	-2.36344512652882	0.0181059077866716	0.30006678090722	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2459789015804	4.31591871182879
Merged-chr4-138066458-10	31.9450290506427	0.028789831371354	0.33683191454592	0.0854723977392857	0.931885838564876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84749371050339	4.93672509206502
Merged-chr16-33837444-1	5.36418568006468	0	1.42167108318849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88167222-4	8.0178530722705	0	1.36932969755124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88745139-3	11.5632530254942	-2.80298797191263	1.08820203069578	-2.57579740971486	0.0100009223911768	0.201157592068339	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57074540165941	0.303163067301871
Merged-chr17-88257338-4	7.36301307581026	0	1.36785835952231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100327946-2	3.8836862797128	0	1.38467544628629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54377267-7	26.7013455544047	-0.941091482779116	0.37388429939049	-2.51706606646306	0.0118336637272743	0.225865915221526	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02170609241829	4.19712595130919
Merged-chr9-124014367-1	1.97543108665083	0	1.4995587476558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11822505-4	8.52648920484446	0	1.35505999094377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9638191-2	4.90057269017021	0	1.37998515122424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38071253-6	20.407927374926	-1.88922981744791	0.538906690244393	-3.5056714857096	0.000455456995354411	0.0200899404293977	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31919886341023	2.14029987907158
Merged-chr3-41905803-4	16.2797770129965	0	1.35548080134335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94785880-4	7.61797365816266	-0.677980903847675	0.718731179703924	-0.943302479415132	0.345526208030438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00794942412004	2.24986710229783
Merged-chr10-78297784-2	5.56618096684734	0	1.36452224053854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153917380-4	5.8185122936508	0	1.38295583831181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24417886-7	19.8930959294243	-0.0385796982313588	0.377035369803435	-0.102323817130133	0.918499651189513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50449280904898	4.39664360717587
Merged-chr1-191599411-8	29.4785363523437	0.427977872033093	0.425013090841612	1.00697574087803	0.313946432146866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99013578927945	4.07459699116182
Merged-chr16-17803136-4	14.0381494080715	0	1.36513774910831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45250090-4	10.1730724425041	0	1.35349488047332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38651664-2	4.72763914098328	0	1.38661382671154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138543695-3	4.74384416068091	0	1.36310390748072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45283293-5	16.7029083971863	-0.283432313620648	0.439150760340446	-0.645410048706099	0.518661493155224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88563446973721	3.47875571785846
Merged-chr4-9135964-4	6.40753701565444	0	1.35669010892314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99632965-2	3.5431734856144	0	1.38471224518497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85290043-2	4.20400458814826	0	1.38426428865981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4446784-4	8.25515428951992	0	1.35111069043807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77708572-4	7.33166117230439	0	1.3568552809848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104375673-3	8.02482470488621	-1.82900298541564	1.31309770279586	-1.39289177151198	0.163652521075609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr6-38710961-2	5.52781940434807	0	1.36148651209149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53448761-2	2.50360771710148	0	1.45856433992034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47215076-4	9.13772225864571	-2.2125955433907	1.19493849242959	-1.85163969309581	0.0640775792242492	0.69443680142913	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0
Merged-chr13-97573759-4	7.1782610929591	0	1.36764808190358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61281280-3	7.64687558922431	0	1.38089881638047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20879724-7	20.6434563045959	2.28243017942399	0.639381543075032	3.5697467406502	0.000357326516233692	0.0166728859192681	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	4.27699231589744
Merged-chr7-35169566-4	11.7066046696616	-0.159429681952367	0.683722546662515	-0.233178915527356	0.815622477592468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10444551640901	2.12382511851675
Merged-chr4-108789513-7	23.3614881036312	-1.06170175194549	0.458656277580925	-2.31480915849486	0.0206233784996883	0.327195153211317	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29628963736663	3.19904381560858
Merged-chr11-70805514-4	12.112851418684	0	1.34634508998169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95784427-8	27.9542956339677	0.337283365860604	0.404793951711561	0.833222345429058	0.40471934243763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50600133944803	5.0211821297668
Merged-chr13-9099501-3	7.59566236581062	0	1.37108705101633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67457666-2	6.95624207374938	-1.58300146362216	0.644362451195781	-2.45669414889786	0.0140222010772666	0.25481202927182	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02557463586334	2.3017930930089
Merged-chr19-6270036-4	6.2275931341093	0	1.36514404600519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12805902-3	7.443529550363	-0.564092442947662	0.933053938955452	-0.604565737731261	0.545467577794407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40343015234056	1.40373237117109
Merged-chr9-89872379-6	19.5427709568106	-0.310501959711255	0.991339283455236	-0.3132146227768	0.754117609604651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.662147012823607
Merged-chr4-103123258-3	5.76850772289341	0	1.36938617643066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30219443-7	28.7880278417798	0.70714534182693	0.356289400519615	1.98474987130019	0.0471723072154184	0.567184129157914	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71349979787223	5.48435672691935
Merged-chr15-101248152-4	11.0667332198617	0	1.35763636173575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26833134-3	5.52656879172391	0	1.38179416929493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24946665-3	6.57820838647859	0	1.36548283435799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41449685-3	12.6921720493677	0	1.37991774211395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21590556-1	2.85766904394557	0	1.40444687500639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80530519-3	8.21416242674906	-0.551991324940891	1.28141836418231	-0.430765892209702	0.666638602150086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.601513806634888
Merged-chr2-61514219-1	3.46264519283713	0	1.45954919370014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49225793-3	6.07029704556009	0	1.37269818550442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57706052-5	14.9041607979936	0	1.34022089390242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15297468-4	7.07097482341632	0	1.38604331258881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26237956-7	18.55485144739	-0.0938787485306697	0.443704399178324	-0.211579485586619	0.832435115131898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05532083283065	3.96234898919892
Merged-chr12-29696865-8	24.1399228787404	0.48854237751109	0.443213611182741	1.10227295639091	0.270343022762661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85135813824078	4.26758188412778
Merged-chr11-21377737-2	9.12416707285928	1.53656427436416	0.582389447252222	2.63837932094038	0.00833033439916716	0.177758418570414	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78734291970211	4.09996416321023
Merged-chr6-83005725-1	3.61380382817818	-0.967670252434933	0.987719685209246	-0.979701292710324	0.327233587824683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	0.730937814817307
Merged-chr5-92369273-4	9.43339649289482	0	1.38615678255738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69171339-4	8.75238212393677	0	1.35756569242405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151269901-4	8.81663147173557	0	1.36939877398939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50340792-4	16.5062108807741	1.89035129837435	0.403309968101337	4.68709292575525	2.77113162100942e-06	0.000302481814832231	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54238871291771	5.45487740934277
Merged-chr10-44400340-2	5.82336909408269	0	1.38163352825572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66094082-4	6.16483735026864	0	1.38006549966477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27767025-5	16.5471103533124	0	1.37703634012284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118537453-6	15.4873536231251	0.925310639496072	0.697184265515948	1.32721101904286	0.184438888353697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	2.36284816441315
Merged-chr4-105285859-2	10.2644706609262	0.552002476620872	0.816162745083826	0.676338732619042	0.498825606531545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57597341069752	2.02497645810754
Merged-chr4-120061912-4	7.29496461428578	0	1.36274972004983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130731027-7	69.2166222194714	0.21857936154578	0.345916056012662	0.63188556225265	0.527461658220022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49315400026211	4.62383855694454
Merged-chr5-3462250-4	5.66687332191498	0	1.36096316230963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58322677-3	5.85283686230587	0	1.39395875917509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87552878-3	5.35093674196265	0	1.36887931319575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154765839-5	15.2572425440857	0.713221327813412	0.587868996720361	1.21323174345368	0.225041230906171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.352542534727	3.97950850954138
Merged-chr17-34057847-3	12.0403468861191	2.51059745018383	0.668639317008911	3.75478585587029	0.000173489743509522	0.00924581271317067	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90990595114556	4.63495637685261
Merged-chr10-127538057-3	7.85518620931611	0	1.37974447771534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-35931059-6	17.3784293788999	0	1.34701740871047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113663667-3	5.67315476615607	0	1.37948431319833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115731763-2	5.04442504477788	0	1.38187438171051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77838794-3	14.4734074285517	1.9431415163107	0.552414771537935	3.51754083421946	0.000435565329332252	0.0195032090092025	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63470260453338	4.76048326641175
Merged-chr17-59021036-4	12.4769458221037	0	1.34438167355115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79229561-6	16.2277310307303	0.281132814668502	0.518267804121187	0.54244699831434	0.587510610425161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20173594253295	3.50687456829216
Merged-chr19-32804921-5	18.6024579139256	-0.270380591177241	0.576676297337362	-0.468860246945549	0.639169532841791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04238655551775	2.81480011025882
Merged-chr7-98334110-4	10.7990068706176	0	1.38650957364823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47020204-3	6.287582135954	-0.0364726790970554	1.23947289123962	-0.0294259594984593	0.976524869080391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	0.977057525713991
Merged-chr4-130810307-4	8.73707520299756	0	1.35657130868343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126097700-4	10.4146234378672	0	1.36588440805309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46555865-8	25.973793759831	-0.304094471618993	0.424645595906239	-0.716113565171971	0.473921228296831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91829498470592	4.61608504346624
Merged-chr18-5832784-6	19.1564028078979	0.0956287650358613	0.369236438036648	0.258990595685385	0.795642496559674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88562656040801	5.02622445680799
Merged-chr6-99485899-1	3.65747357299769	0	1.39714441693227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60116106-1	2.89897034884915	0	1.41716783188787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95990227-1	8.90544836552333	0	1.34447617006379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122247801-1	2.80385564701439	0	1.41329845076093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54405966-1	3.79418587100301	0	1.38681238946367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8117021-1	1.04512552373581	0	1.82754551390138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-32939461-1	4.13981107209142	-1.70762182626211	1.05234792855741	-1.62267799453264	0.104658257879875	0.938382906055543	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	0.723581231604105
Merged-chr5-25011299-3	9.83934676406619	0	1.36471486656323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60933996-3	7.38434868929323	0	1.37723934697736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34340513-1	2.85850514792643	-0.465062580508903	1.39077007883223	-0.3343921382745	0.738083671067901	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21893062318232	1.94029111758935
Merged-chr8-26691596-1	5.65802347055155	0.565575839480641	0.978392932458954	0.578066153911397	0.563219456852087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98343639832043	3.74098403022481
Merged-chr10-7937838-2	5.1745584993216	0	1.39612807762217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55868140-3	6.1988529542243	0	1.38696438071081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74367786-2	7.87080216953503	0	1.35223145372467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84768689-1	4.66444383930718	1.03065793294858	1.3210134226585	0.780202468249273	0.435271709733876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr12-40576573-1	2.32241601213291	0	1.49746389165785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94173911-2	5.30720330000562	0	1.36562965475755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79227838-1	3.50514530712671	0	1.39639608950698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20740300-3	6.00422073712688	0	1.41705356290203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65544540-2	2.88002132254539	0	1.50877837509921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29176700-2	3.63144093368822	0	1.52583694837785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95613538-1	2.08721325778088	0	1.47245384871861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87460544-1	2.14542541687037	0	1.51227894354364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50695711-2	6.37140579329177	0	1.36613916446411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137831308-4	7.5355925452453	0	1.36711266389155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87766434-1	5.30388323402456	0.230160329771425	0.831022017122746	0.276960567865953	0.781810384426905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02911050163644	3.79899839986197
Merged-chr4-124772372-5	16.1606635628165	-0.863431986070332	0.514896679116575	-1.67690338875704	0.0935613753907315	0.873032023434548	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90152229813143	2.86166964616929
Merged-chr6-47781786-2	6.04172198744264	0	1.359954458335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95075302-4	11.8536545426	0	1.36762673112721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4174945-3	6.04219479120848	-3.84102206119509	1.13743144062281	-3.37692622519025	0.000733007075520818	0.0284204933082997	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4077129639533	0
Merged-chr2-158161858-4	7.42309599743489	0	1.39429007663992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145286932-4	7.43185769900343	0	1.36825897270183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75775904-4	8.10652797496913	1.12835622677025	0.991339746214038	1.13821344405839	0.255031366239178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.43811874863432
Merged-chr3-108346013-2	7.7860200150091	-0.300967623294529	0.738827098224649	-0.407358668919608	0.683744578427064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2618610394913	2.13497759750825
Merged-chr12-112627649-3	4.69087205966723	0	1.38219902833617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4940320-3	8.11525322773012	0	1.3716018038855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38982866-3	5.73618169847742	0	1.36938149004579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15277201-8	47.9940507698103	-0.998348908167212	0.349539837357924	-2.85618061653132	0.00428771143721367	0.110218704917411	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29060474775079	4.48119117831398
Merged-chr4-16196838-4	7.98219338422227	0	1.37379370804333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79726332-4	5.43059526036818	0	1.36342849208402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51270649-4	6.30212719704314	0	1.35171168499885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35754967-3	5.71792450889163	0	1.38319137236761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132476401-4	7.89658973120171	0	1.36980263720653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105901699-6	13.076827181194	-0.0568531078416455	0.513096994419733	-0.110803821616498	0.911771914804209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46929805182977	3.1355090625575
Merged-chr10-52309395-4	11.1052366466694	0	1.35746838219139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90740280-5	23.8559482338562	0	1.33738688037321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111289892-16	55.3213733285996	0.430522963501324	0.244002985097678	1.76441678911829	0.0776618335701255	0.780336342151285	C57BL6J_F1_Control-BALBCJ_F1_Control	5.87036609829543	6.28380301315491
Merged-chr7-43920716-8	45.3641923175349	0.707162195763047	0.402812325316542	1.75556245754729	0.0791631472996657	0.79016716666202	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14498914632708	4.32941733634086
Merged-chr4-41737753-4	6.96433937471285	0	1.36320890432395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128259137-7	20.5997803859556	0.850017189249253	0.422323640888168	2.01271514770432	0.0441446048918322	0.542785925653722	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3788241922788	4.29193571348989
Merged-chr4-137913592-8	34.1306471183449	-0.65556249017407	0.387391568974185	-1.69224769632959	0.0905987558403987	0.855307010894101	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61078625022532	3.85664770746902
Merged-chr3-96251347-3	6.67467209465485	0	1.37211791229228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116892803-4	7.33101014463757	0	1.36686347306091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31259102-4	8.10423372100535	0	1.35957079397253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124657601-1	3.07578580038789	0	1.46081581591599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58701652-4	5.85196473795588	0	1.48086481039097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123585685-4	7.9306197313849	-2.16712366571737	0.94273375852106	-2.2987653153708	0.0215182693568043	0.337384368031878	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88787614081909	0.969611060640422
Merged-chr2-160620139-9	96.5448777719289	0.223437295393011	0.381513294173126	0.585660575412657	0.558103632576841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90410499049034	3.98709708570177
Merged-chr15-64191442-8	24.8672678428708	-0.015554815069276	0.419023676835756	-0.0371215659858118	0.970388076707568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9457474248028	3.96825393509081
Merged-chr4-53111939-3	4.88759247672351	0	1.44833006010797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103476916-3	8.50327076290695	0	1.40882924781469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100618709-1	3.78618187993371	0	1.38979478356199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86881694-3	11.8535014247831	0	1.35004754671273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152580620-3	5.21258437219161	0	1.39097775235989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83657612-3	5.99024923392553	0	1.38366297723476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51083828-3	6.86611134522228	0	1.36378663808973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-25662938-1	4.14017031436702	0	1.38889730021641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99068679-2	6.31321910173304	0	1.40023232159244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91378945-2	9.57236827221266	-1.1585775468879	0.649844439143133	-1.78285367558976	0.0746101255924913	0.761639777855819	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00089765976862	1.68580115571326
Merged-chr18-67249150-6	29.9984039703957	-0.65227542427519	0.390893449045121	-1.6686783210836	0.0951811477468506	0.882097102908603	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40676586175336	3.85125127001691
Merged-chr11-21425594-4	14.6066159554791	-0.942479721978691	0.661213651879718	-1.42537849800799	0.154047820096989	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81951441047668	1.61224616757942
Merged-chr3-61389627-3	5.42701465657708	0	1.40833211349394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107357025-3	6.69007013552277	0	1.36046388815353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144617220-4	5.27286333691599	0	1.36652933305656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62654719-4	7.14762972033382	0	1.35259730749565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84254146-7	22.1215001877218	2.40928933423419	0.621215140661714	3.87834934555495	0.000105167622764166	0.00612733848428437	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	4.06151761273072
Merged-chr1-172364685-5	20.9248330047348	0.846684230610564	0.392343966989283	2.15801516487621	0.030926652767989	0.431033315502255	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89284835156696	4.69202175327825
Merged-chr16-57336822-6	60.2552738054565	-0.22878765065977	0.493668479912549	-0.463443910172872	0.643046210546591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24828232421423	2.70842954159894
Merged-chr1-152571520-4	6.47858153204113	0	1.36898488581353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122572056-6	18.2860026954482	-0.660879375216638	0.54200538196393	-1.21932253296448	0.222721799519584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19407061032357	3.44790976991487
Merged-chr7-125503710-6	12.8325439003508	1.74766324920449	1.23765737470057	1.41207355519318	0.157928304354763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr2-71594707-5	19.0078930263073	2.45053123264238	0.633632432745476	3.86743339829439	0.000109986853959339	0.00635364016405496	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31711648651663	4.29346774061742
Merged-chr15-90624374-3	6.89026241723714	-1.0023208026971	1.11649296851067	-0.897740362874059	0.369323985475184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.01477727114168
Merged-chr13-111941355-2	2.90702840573442	0	1.39887054113641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21160853-3	11.8225928303589	1.02413239000185	0.566369149617429	1.80824183431183	0.0705688702328763	0.735549576454872	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60068404935219	4.12275075900885
Merged-chr7-101035885-2	2.91104571637642	0	1.54559364134105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31669318-4	5.30820398771629	0	1.4062083529795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77934374-2	3.80259629508568	0	1.41944108367875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129066040-2	5.11384949649247	0	1.3738819027461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68910972-2	2.66687224844514	0	1.47922164508062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-35126761-4	16.5426241427389	0	1.37482588345995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6292204-4	10.0231177543874	0	1.37603584209963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157407857-5	17.6474765265959	-0.156828868296054	0.970089971070632	-0.161664250711685	0.871570257950072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.18984215491549
Merged-chr10-41870292-2	5.16505922806252	0	1.36446889916271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38962518-1	4.89994931716165	2.02588961685904	1.18435197912083	1.71054690883609	0.0871647868950067	0.835365065378291	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.60310561942228
Merged-chr8-79392812-4	9.83569178516229	0	1.35933845381751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125385501-3	11.6483252500058	0.424708837878707	1.06573985663821	0.398510795325247	0.690253702357226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	0.788686275880602
Merged-chr11-57980561-9	51.096474494833	0.756628159079714	0.354641122489354	2.1335037340528	0.0328834256683405	0.44961990685348	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12104885966166	6.00394689841532
Merged-chr16-93820471-4	7.69586014337942	1.36747379158842	1.19197238694681	1.14723613278589	0.251284041852621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.25298535761957
Merged-chr10-24142954-3	5.59169007939539	0	1.38115620314926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171240221-3	15.9628208639151	0.477101711436338	0.426684567147517	1.11816022460309	0.263498568679438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16977463135203	4.59666962711344
Merged-chr14-45583827-7	24.5272859387622	-0.221978767338641	0.439864588560942	-0.504652506956438	0.613802923904678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35787699279435	4.07833320089699
Merged-chr13-35081322-4	8.22257484939934	0	1.37521419626721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112281936-6	19.6055337500872	-0.586513268747548	0.526682558376728	-1.11359918687116	0.265451175423066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44365980988792	2.41307516068939
Merged-chr7-143624769-4	8.45762703007586	-0.954050036744766	1.00849632922703	-0.946012403908305	0.344142259668741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.724326877898254
Merged-chr17-28293483-2	3.49377834415537	0	1.37483100802451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76272042-1	7.18136123685399	-1.12188784133777	0.907716276271598	-1.23594549383412	0.2164788248752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68099393481061	1.39949824061849
Merged-chr8-69007280-8	33.1153894204865	0.694081899618515	0.372603364588053	1.86279020959966	0.0624917880155869	0.684463248990386	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10160730298782	4.88348040340207
Merged-chr4-138207108-7	25.1360224220218	-1.02462401715861	0.433220466196688	-2.36513299141648	0.0180235973885279	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21725176129994	3.93988886557017
Merged-chr9-44587483-3	5.69139680339318	0	1.38769216898576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77497832-4	7.87213062112716	0	1.37460576173735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67036347-4	6.4448040135437	0	1.35591096797341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85506465-4	6.00159951686733	0	1.38450214151456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155755921-8	26.4807672267409	0.348849525777426	0.346610673538035	1.00645927090628	0.314194694416965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4593761803265	4.76996740412763
Merged-chr3-149085050-6	18.9791031442571	-0.233950994218856	0.513558054082718	-0.455549265285543	0.648714133389346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6353187730282	3.3881308130766
Merged-chr8-126920614-2	5.97044370605866	0	1.36452773687327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103305834-2	5.75728507672807	0	1.36871612872862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16019510-4	9.96233225952906	0	1.35457647401152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62936051-3	4.38822497382245	0	1.40179262935592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152932237-3	7.22287960090831	0	1.4258719208247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47691542-1	9.23749053201346	1.12537043008319	0.675169810995289	1.66679613299689	0.0955549494442831	0.884432401982255	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8022285154312	3.66392541104188
Merged-chr11-78209810-1	3.97337505120357	0	1.43243632460468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146058433-4	6.61471616397808	0	1.35329812598141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8744548-1	2.76958180368755	0	1.46658211166194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122653897-3	5.18927211424696	0	1.38895895856558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81957217-5	12.0067946256891	-2.76047956199735	0.82042871745459	-3.3646793478437	0.000766326613952358	0.0291598121413431	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63978970766697	1.10056930386922
Merged-chr3-37361167-4	8.34889699607002	0	1.36564481391956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38070780-3	9.41575263553773	0.279478243907623	0.64175138963144	0.435493009322704	0.66320461212667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85925141407303	2.44675808280982
Merged-chr13-119358906-4	5.13770768795396	0	1.4120934230628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96500472-4	13.9939024797701	0	1.35162344635983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133614218-18	115.816733030962	-0.353983549754574	0.262167789613532	-1.35021754684811	0.17694621134669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.0763874528559	5.74135699866351
Merged-chr12-36119436-6	28.2990472759376	0.884276657007668	0.374256578996281	2.36275514348795	0.0181396501673141	0.300431749970896	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16226046420191	5.99162161820958
Merged-chr16-29606824-3	8.97750018830029	-1.2345879642888	0.691280614392595	-1.78594327482131	0.0741084432077021	0.758798429897811	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32107862856844	2.01086664255504
Merged-chr5-103746959-4	6.97457737379267	0	1.35661522833117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13796818-4	7.51428526490332	0	1.35224117403073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18087826-2	3.6728545878388	0	1.41530034948476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24387005-2	9.37457535698644	0.273968782432543	0.73504811921634	0.372722241265823	0.709355181240536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67883239311636	2.52589109908387
Merged-chr7-46987031-2	5.59906177685474	0	1.38260460726325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26638871-4	6.36484351422187	0	1.3560729512141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3624160-3	4.99086312708602	0	1.39287682984556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34388843-4	8.91632373198997	0	1.3488099636045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100703488-4	12.0509088496618	0	1.35553911514817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34267554-4	9.80877498927471	0	1.3498951257299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118647703-3	9.0357090213457	-1.77235347317114	1.01041575261113	-1.75408337468116	0.0794162219720803	0.790815411628397	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73515138435419	0.724326877898254
Merged-chr11-3910735-3	6.82982565633791	0	1.36378780520694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75082029-11	43.8862513555873	-0.292182638737463	0.313322768807905	-0.932529224892038	0.351063090561247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0445079584614	4.70067661305528
Merged-chr3-41587770-4	12.7314993467818	0.194486776041151	0.662688911838493	0.293481258803	0.769154322461848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09927897987273	2.29551975980701
Merged-chr15-25485576-4	7.00381563874617	0	1.37038183335713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136687640-4	13.9299445336291	-2.66288419320366	0.496516984467867	-5.36312810337708	8.17929548295186e-08	1.46023495988137e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40645672875494	2.49928382459331
Merged-chr10-39520536-1	2.65993930066941	0	1.4508042096397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148478738-1	2.74260098397977	0	1.41496046760561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14843231-3	9.06822199484033	-1.69956011402883	0.974775578964279	-1.74353989852172	0.0812393512465612	0.801589923988448	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52860153008918	0.903978167044898
Merged-chr1-14820018-1	3.29203573310443	0	1.47251846024438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70095863-1	1.37796106214287	0	1.57372638101352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13300400-1	2.84743053827045	0	1.43544162010901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96485629-1	1.57251938173118	0	1.6422768593034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-7733272-4	5.94363312886922	0	1.35148156715391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123022891-3	6.33087126638966	0	1.40294113329701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109439310-1	1.85154161096481	0	1.47056177620288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-14486969-1	4.13472732397113	1.25056834465087	1.26610176237877	0.98773130392085	0.323284259157408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30127498244712	2.47135968174131
Merged-chr13-113446722-1	3.54666171867223	0	1.40956553720558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107781947-3	6.74818870727457	0	1.35800371792061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91345931-1	6.18276749348958	2.88403192181268	1.11313143845051	2.59091767799432	0.00957203860523438	0.195098030199451	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.72495582979266
Merged-chr3-127323722-1	3.62101202884385	-1.17003042014845	1.04422577162008	-1.12047648310115	0.262510768567202	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3639660552575	2.14883028460928
Merged-chr1-36875416-1	4.13224808330368	0	1.38012614189033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140538879-1	3.11941204129807	0	1.42363063358624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108123475-1	2.09142707508003	0	1.52859949955729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73502107-4	14.1306422282671	0	1.34744800827826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133183214-1	4.47638066220865	-2.44198209849804	1.04147453595844	-2.34473529038399	0.0190405924339014	0.309732659387901	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57663368784823	0.724326877898254
Merged-chr13-97441364-4	11.0979526975049	0	1.3512482520195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78113306-1	2.46327466725886	0	1.40721904786846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17924327-3	5.20844929466339	0	1.40656869950003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124577622-3	5.22257850164012	0	1.36955348477258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84190370-5	15.4692310552526	-1.02362022472364	0.464840955807678	-2.20208699757333	0.0276591637617894	0.401689682855226	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08999219451151	3.93354025838252
Merged-chr15-36367507-4	9.83279241705886	0	1.35897325298119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78407805-4	5.79784686638761	0	1.37996391553679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93192906-4	11.8036700161164	0	1.37551038972038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28007318-8	22.1432921142324	-0.718949150417043	0.40149845809309	-1.79066478569228	0.0733471038737189	0.753985480232883	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88183777868583	3.95835905877725
Merged-chr17-83675599-2	4.6191595000521	0	1.3761445663572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101949179-4	8.4323131825595	0	1.35089286879461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154510447-2	3.99299699089232	0	1.4056421880676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116111762-4	18.5509456174167	-0.837562654617251	0.641286171425741	-1.30606691978893	0.191529801279928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83989899587789	1.6044622311735
Merged-chr12-78914617-2	5.41512645543264	0.546449995667704	1.30485531741951	0.418782058342199	0.675375418331398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.67591700901439
Merged-chr19-53453423-6	20.8365019229034	-0.509529378699803	0.470798403158436	-1.08226658221764	0.279134090478508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69256444236854	4.30599151819862
Merged-chr17-87155616-8	27.8196549971008	-2.03064257947907	0.41089160182034	-4.94203962914521	7.73094961162806e-07	0.000104279575667119	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82025588349175	3.82124828937168
Merged-chr4-75400964-3	13.2045024865706	0	1.3576620811002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21351867-3	5.64534227926451	0	1.35954693830603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24282669-4	7.10753208710585	0	1.36886679491053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46886106-4	8.72164796139976	2.71203908133533	1.13735569517003	2.38451268398485	0.0171017584522214	0.290510777407595	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.58059388295115
Merged-chr13-112002779-4	6.83346748531104	0	1.37527972977494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66843450-7	23.0963712482959	-1.73376434975543	0.50925303853571	-3.40452431023415	0.000662794004732206	0.02655034583879	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23079833154593	2.22082744010265
Merged-chr8-69189730-8	24.8827266515064	-0.709154429620024	0.371161228342989	-1.91063714490323	0.0560512274200304	0.638418679382282	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91559978703883	4.29095685477781
Merged-chr4-131975317-4	7.71078698318326	0	1.37483576863914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6238846-2	8.05426079778877	0.858684897717786	0.699109346616905	1.22825549661593	0.219351071531134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9699838995169	2.56800675838094
Merged-chr19-28685657-2	5.39428377755503	0	1.41695413967967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87044597-4	7.68469095219913	0	1.35571721831591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70499870-5	10.8210608107606	0	1.3436046178174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34945281-6	32.9088512837632	0.345212537465153	0.417084468904889	0.827680154026245	0.407851661340211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71282437240968	4.03565777059062
Merged-chr7-14534199-6	16.2150418478209	0.810986832270344	0.586097369054237	1.38370665880825	0.166448293816242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18069501644732	3.34007885633814
Merged-chr7-99401566-10	39.8940864900994	0.317676233961644	0.352540426414175	0.901105831160563	0.367532052841954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45961366865959	4.87517454517034
Merged-chr8-46804307-4	6.21346357414104	0	1.40298067754077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141528565-1	5.65246380305927	1.83137495866484	0.807014493748984	2.26932102564501	0.0232488108387493	0.357256931006403	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2972429702454	3.23903942580505
Merged-chr5-108664194-1	4.81030871852397	-3.6030972979776	1.21097104196029	-2.97537857895017	0.00292627168630845	0.0833696030377574	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89736933917373	0.41385117919798
Merged-chr14-62026730-4	9.58803397204104	0	1.35571677759746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64113425-6	18.0679217244543	0.336094204395643	0.461198516468691	0.728740861894031	0.466160192464937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58331936050178	3.8807177027871
Merged-chr10-121494159-7	18.6091510857403	0.119522366437784	0.526841242283978	0.226866002212787	0.820527939095722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93147465031574	4.32725706452192
Merged-chr12-70471534-6	17.6490076074698	-0.919240288311973	0.586565291738096	-1.56715765705827	0.117077845035739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20820925061291	2.09906462022006
Merged-chr4-35219724-4	5.28581242758108	0	1.36652861851073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9457207-2	5.50496834985759	0	1.38421150266267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17779026-5	15.332684823603	1.38057812264814	0.565778539010484	2.4401387247079	0.0146816227747355	0.263305289479329	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61076849167644	3.72162533176923
Merged-chr2-164940620-4	5.06267762905573	0	1.37978015586195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77839063-3	6.24937902782443	0	1.40319331049994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162646462-1	9.41393500262282	0.208618897819335	0.556845943300788	0.374643831618337	0.707925370393239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07573628624387	3.88886975566021
Merged-chr3-9199098-1	2.65893464769058	0	1.44771645073155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23187359-4	8.44520228348184	0	1.37364267686691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149407661-3	11.9725192720416	0	1.35411249538949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80818563-3	4.62813877501425	0	1.4263773374093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9099305-2	3.93716935555695	0	1.42804088237475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9461485-2	6.53284376717592	0	1.35858209706384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143180944-2	4.67603537128086	0	1.42510957689327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65653195-2	4.85620701042089	0	1.36876244414555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10434289-3	5.49883570526018	0	1.40220825805409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173452040-5	14.3506324199162	1.24418738936567	0.578264149425295	2.15159004860012	0.0314296565977741	0.436617608739689	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11138837335333	4.26176253254785
Merged-chr5-143044106-4	15.3596820036863	0	1.38804427322122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89628252-4	8.63885647323298	0	1.3773076765982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30427588-4	5.05943021350862	0	1.36225860865897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87206522-5	14.4900908239405	-1.04119289221571	0.734950745324413	-1.41668390547195	0.156575364664329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15813062208874	1.51301315377886
Merged-chr1-189792751-2	4.07076987331628	0	1.43073212718175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12591120-6	16.6743250023767	0.820482056313853	0.768905779746118	1.06707749886438	0.28593684161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.15589752119199
Merged-chr8-43368740-5	16.973882490061	1.03014394846182	0.53475720844704	1.9263769280519	0.0540573261448094	0.621905225800147	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53129278194261	4.51035494369695
Merged-chr2-102682382-5	18.0034265754645	-0.359254444254034	0.549683084715004	-0.653566489935374	0.513391139388643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64850199812139	3.56028764304801
Merged-chr1-177110801-3	5.73972093042999	0	1.39958521739807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57585171-3	8.15875225843855	0	1.36842169627605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70580223-3	9.14963879486983	0.980929282720903	0.80849600710847	1.21327659517965	0.225024088112718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50288339618282	2.45310456847667
Merged-chr15-25365618-4	9.95453061318404	0	1.35889150619541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32881900-4	8.00074478509995	0	1.36887924588157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115585789-3	8.63224619935257	0	1.35841523398281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43921569-3	9.60970858937399	0.0912635793368517	0.645689660540551	0.141342791923366	0.887599145850861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26292282237182	2.35163392625407
Merged-chr7-35269811-3	11.2127663227222	0.350396093576438	0.681898070326281	0.513854062394951	0.607354026832652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20653856906143	2.63494837014979
Merged-chr1-55667120-8	24.7320351657843	-0.00311226057492351	0.381616143291925	-0.00815547410567148	0.993492945257745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39076533441638	4.39887350986474
Merged-chr15-5263341-2	3.51941261015249	0	1.41925454805977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92022267-2	3.29573828501277	0	1.39748474367383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90881928-8	61.144758247459	-1.26715731676024	0.330974294580465	-3.82856716521283	0.000128891457874021	0.00726052928349627	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52659982687687	4.33018983721843
Merged-chr10-58408181-2	5.99527584199806	0	1.38727067283535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131501773-2	3.92470407965244	0	1.44869171758245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83152436-4	16.3914724008873	0	1.40163470268378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91801935-2	3.5036498730374	0	1.40528772065024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50132839-2	5.65565753219916	0	1.36741453633136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55049175-8	32.0832080814207	0.307308697419242	0.419148728798268	0.733173397186053	0.463452678589925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80130838068125	4.45786661102141
Merged-chr9-100876228-7	18.4430675959284	0.605246099165405	0.570270052952238	1.06133242668469	0.288538854160172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80950514011689	3.70702151096745
Merged-chr16-44123506-4	6.64003240691389	0	1.36667805729031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50479116-8	23.795053541934	-0.266196508868541	0.879942843322584	-0.302515681431543	0.762258981073039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.18984215491549
Merged-chr17-64201820-4	7.13370760807387	0	1.37890375034001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103186817-2	4.99389819916521	0	1.38205936719803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-126817908-6	16.2332650744286	2.41811050313236	0.788345002585721	3.06732521320122	0.00215983732347337	0.0661073181681807	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	3.40742407678235
Merged-chr15-50871159-9	25.8878640506763	-0.468035494820048	0.403647331320738	-1.15951589048943	0.246245963138554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27736142671343	3.67858900817179
Merged-chr7-58686766-7	22.7399156347333	1.48349496102566	0.579238970256049	2.56111041763971	0.0104338188981558	0.206731067666743	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46681435340383	3.66907935824954
Merged-chr2-124703558-4	10.3248838709651	0	1.37511771907253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55122641-4	9.40853254799004	0	1.35929440825623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148168577-5	15.2719413753404	-0.0873296621043389	0.64232604120115	-0.13595846424198	0.891854116724725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.786034639139	2.82454569995389
Merged-chr14-57808747-4	8.90587552193213	0	1.35118243697735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40995022-7	23.283988157082	-1.29271143565566	0.457788347146552	-2.82381900656336	0.00474551747006632	0.118657582408158	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98349326482752	3.53992660551373
Merged-chr18-82840555-4	5.74595347064331	0	1.35433754855608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78601293-4	13.8226541308191	-1.94070550889805	1.0359471444778	-1.8733634425686	0.0610182145995412	0.674467541800288	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96353301543917	0.601513806634888
Merged-chr11-105567445-4	4.73593543312636	0	1.40497373741705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32032262-4	8.50918880452859	0	1.35701634709909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29434734-6	17.7694514754394	-0.271124382660295	0.699022244626734	-0.387862310168785	0.698117931052773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7414873742332	1.5254723561935
Merged-chr11-118148602-6	18.9886336694452	0	1.34696942419326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142698482-6	13.5026690644151	0	1.35186617581604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137293301-2	4.17579097186358	0	1.3680324396927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80829716-2	9.27340950958391	-0.696850321753245	0.600049544402399	-1.16132130797175	0.245511257323202	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07402043870955	3.39149483489274
Merged-chr14-63146439-1	3.06769839917348	0	1.47054864425119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78712835-4	8.8412205517889	0	1.36051276837818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-42018210-3	4.96829826126426	0	1.39027324966926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24789857-3	4.32554757185216	0	1.4290867046727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99158288-4	6.45032250402425	0	1.36922723868285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119365447-4	8.53423884246913	0	1.36385605435765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49039739-4	7.89722954200326	0	1.35250428916397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43729131-4	8.88125005201761	0	1.35297191927711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176824654-5	13.0430247173403	0.828955266595516	0.675277849463442	1.22757657052454	0.219605961520239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90329117160805	3.05372613618122
Merged-chr4-135829210-4	12.1878355145316	0	1.35391803644776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29739601-4	13.8362563557058	0	1.35069396354784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44523933-4	13.3090284514949	0	1.3490209825144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60736865-5	18.1987087730637	-0.773031425313695	1.07067582863913	-0.7220032475154	0.470292480903011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42436654726916	0.577068348605183
Merged-chr1-185196501-6	22.8051341373342	-0.346487764600811	0.438983132140958	-0.789296306012855	0.429938845153077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42186114048651	4.80739634837607
Merged-chr6-70804768-4	6.24419782920877	0	1.35157189773642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50698682-4	9.70054689112282	-0.86655817960335	0.755004030971209	-1.1477530503892	0.251070524048854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98591005256326	2.39041776842166
Merged-chr7-101052037-4	11.6761183415366	0	1.35228062431136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100499698-1	2.1737753357052	0	1.57222039799972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66803940-3	4.7436894493606	0	1.42168434970273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125775113-4	5.44510577022328	0	1.37307782960445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9487575-3	5.3831104467027	0	1.44136882712751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101655050-3	6.94726364145102	0	1.40980312053439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8916470-2	3.72163306213948	0	1.3840063100892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114895166-2	5.05411065856324	0	1.39469343432478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38013152-2	4.53753424669644	0	1.36219210244669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35779714-7	24.6442569024727	1.3930304353937	0.392365502983238	3.55033871429114	0.000384735798735466	0.0176339403739133	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01280721254815	5.36882119770155
Merged-chr2-129515879-5	18.2209830679459	-0.45567568887511	0.42497115938469	-1.07225085470477	0.283607374206503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51467915860529	4.30336141928651
Merged-chr11-69432271-3	5.10840041925964	0	1.37357913051215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17360362-2	7.58180843399251	0	1.3621810607441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12419452-4	6.71381192327832	0	1.36046205964296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55564948-2	4.24095748293694	0	1.44558942998142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73936790-2	5.24838291616548	0	1.36053587989096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103437850-4	6.74670835096842	0	1.36137099431679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9818172-4	8.07761139688336	-0.669971033650955	0.841423555922581	-0.796235176606582	0.425895355218193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.1442012793241
Merged-chr9-105780168-4	12.0699725433806	-4.58305461286502	0.964686213397734	-4.75082420502619	2.02589200346048e-06	0.0002308709924866	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56869533039111	0.679405493272835
Merged-chr5-34242651-5	12.7629513074692	0	1.36797309111245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67483592-3	6.19413156788595	0	1.35295874048288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12592082-6	13.9500950270028	-1.53516020524922	0.809861481781218	-1.89558367669588	0.0580151174089226	0.652658064410519	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84515340046558	1.03838943879457
Merged-chr4-10912796-6	12.4915553151891	0.199019225467147	0.746201048658585	0.266709924657592	0.789692511872404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58644687476835	1.83285064568074
Merged-chr11-86955850-2	2.8677912560648	0	1.46010358943093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34800019-1	4.55013469794878	0	1.38368315676254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52386131-3	7.73555775412097	0	1.37900685714729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-14912171-1	2.9592205422168	0	1.59731631048583	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78387865-1	1.54430905912091	0	1.72925108759397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-21565996-1	2.93105597630808	0	1.44526261414687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30204308-1	2.58531574718795	3.37809986236641	1.31309012479358	2.57263366663233	0.010092797422717	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.33974299973187
Merged-chr15-93245771-2	3.27648673506689	0	1.42568678895976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121470396-1	2.86116837888132	-1.83127509516451	1.3822149437059	-1.32488445701116	0.185209476809021	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15025660736152	0
Merged-chr9-120885103-3	10.1002364402104	-0.593357280698653	0.790691535876463	-0.750428269149145	0.452996810438216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11933742128859	1.44790810950236
Merged-chr5-72250370-3	14.0109622959523	0	1.35783863920724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45046959-2	3.3572721839689	0	1.4033736305127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111234659-1	1.70891683385114	0	1.55096524535124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37562054-5	19.367414239524	0	1.33685651644925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66235324-2	3.89308293195644	0	1.39692034531826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69400914-6	19.2883455955498	3.27048678510178	1.07914462452089	3.03062880617489	0.00244045068788484	0.0725316888697277	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.56203317187393
Merged-chrX-145506066-3	9.95279315530533	0	1.36227242993166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21908273-1	2.96086088037355	0	1.45373558968078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28524625-1	2.10522819245834	0	1.63637946212463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5887025-1	3.83179451356721	0	1.40045183722544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83953904-2	2.87560704987789	0	1.40794807875936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-21579691-4	9.26961741803522	-0.434258474625614	0.855985527375561	-0.507319879527688	0.61193039224284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76419196995713	1.58059388295115
Merged-chr1-60173308-6	15.007724083011	-0.632883415277639	0.493687772033235	-1.28195076145219	0.19985991940691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65894668528218	2.63768218765454
Merged-chr9-47708474-4	9.95514716624995	-0.342402072893896	0.595038019326232	-0.57542889995769	0.565001263474151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9516182323252	2.44380666460967
Merged-chr5-34695679-4	8.74677814079506	0	1.35875647969055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51532804-4	8.51620038110476	0	1.37942847020123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87529820-5	15.106752220963	-0.678175214142059	0.74074921169814	-0.915526069325632	0.359915523136822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4635411791775	1.338064021838
Merged-chr6-70709527-3	4.98892530481626	0	1.41551146906087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47217278-8	22.8411616410368	0.578451534507451	0.523204675174328	1.10559320654907	0.268902631549425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18502777413374	3.62873104674018
Merged-chr12-71040581-4	5.96349631680844	0	1.38138881130499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-22049853-4	16.4493949274527	0.694523273659279	0.465813829677838	1.49098895183	0.135964395576568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73088921576422	4.28505271565768
Merged-chr15-50762925-6	17.4956540391312	-0.632089969843438	0.481550778319295	-1.31261332823416	0.189313276149386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80042123950172	3.39279925280115
Merged-chr1-178242319-3	8.67654055945577	0	1.36645525844048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140167143-3	8.34300754057922	-2.42093812673982	0.628179839080684	-3.85389338550369	0.00011625423417109	0.00666610117648342	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93900441986811	2.28284312426037
Merged-chr5-105499585-3	5.91098652375235	0	1.36344004235257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93152652-3	10.8355529171707	1.74815483216477	0.603087760334867	2.89867403575576	0.00374744267569941	0.100200313039028	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63767395945907	4.13856275415659
Merged-chr13-9261940-4	9.17260652349246	0	1.34781549333594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82967693-1	7.09489837410961	0.940689495384773	0.954234481886892	0.985805389808032	0.32422862039125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25857354536688	2.30686573560959
Merged-chr11-103332702-3	5.97156198801368	0	1.38363155473519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67074123-3	5.77785477288668	0	1.35698461111577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143985246-5	11.3735305331119	0	1.37478881954619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74992929-2	5.7597721329095	0.230413541623688	0.822708649377589	0.280066997956087	0.779426103695541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38442592474823	2.2881631765938
Merged-chr8-37011869-2	7.1279100853706	0.204582879097429	0.815516272287662	0.250863025116028	0.801920012117872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90781241071831	2.13923204937339
Merged-chr12-98777658-1	2.67432526619603	0	1.47365757093498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51919233-4	13.0692299037458	0	1.34892014908596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94597831-3	9.08545131577729	0	1.35931978735323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137872628-1	5.86941143253166	-2.59523856282555	0.85622824412395	-3.03101256076978	0.00243735108202197	0.0725188656089942	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83316046100821	1.18984215491549
Merged-chr5-23937152-1	5.14489543281698	0.880548315441045	0.958679512934005	0.918501233792049	0.358356513314573	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	2.03659046888768
Merged-chr2-169906600-3	6.4919953384324	0	1.36532443489555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84883971-9	35.3828693140282	-0.234896055345513	0.57441510213355	-0.408930848915774	0.682590409341965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01904218755598	3.45431282102214
Merged-chr13-46906142-8	30.4332180190166	-0.143637827017053	0.322246045292097	-0.44573961144148	0.655785347795617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28529530494034	5.33219022240985
Merged-chr7-55847782-4	6.04366866937128	0	1.36095146246082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6427580-4	6.80279037560229	0	1.37108850369605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24393163-4	13.8967681402324	0	1.35777421220837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150874735-4	6.22915914925155	0	1.35586250715117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50295366-2	4.81064766361452	0	1.36630311456337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94546227-7	13.1124015952799	0	1.34772963914305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81024060-3	6.58755995390016	0	1.39133727994335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-21101383-6	22.3505002027441	-1.0641146104611	0.415413635206733	-2.56157843719196	0.0104197709529899	0.206642951197949	C57BL6J_F1_Control-BALBCJ_F1_Control	5.71512885762013	4.7479137005582
Merged-chr6-131421805-4	18.4104519405087	0.0750640846053448	0.403183664544479	0.186178387683819	0.852304871771517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64295945140457	4.67631344232752
Merged-chr11-58210704-2	12.2159578170681	1.09125768114981	0.66400993585445	1.64343577140239	0.100292804082962	0.91274343498171	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75033869392915	3.62784308206518
Merged-chr8-94778645-8	29.7336088641166	-0.15560623435761	0.401564968275278	-0.387499524736778	0.698386436703406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0461272016496	3.92736168675391
Merged-chr3-126690863-9	25.2516872353652	0.315650194074388	0.34781911205976	0.907512506156232	0.364135839070866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78302865986618	5.04278654232222
Merged-chr15-78355746-6	12.6859002135163	0.655144932108954	1.00775845453697	0.650101151877679	0.515626885238518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.837303648891292
Merged-chr1-176227706-3	7.08361412315764	0	1.38560703181564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73511204-1	2.40221391680995	0	1.44449231151761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58804317-1	3.65863240192484	0	1.39193205941338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34504409-3	5.58404463492857	0	1.39208391039837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63205712-3	8.67375044123018	0	1.3689157342834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53431225-3	7.1414835315597	0	1.41965695121998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9354030-4	10.2295496816858	0	1.4030207632035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47766856-7	26.2240597672122	-0.313514209986616	0.404678706690685	-0.77472376184658	0.438502906938705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21923521191689	3.83577760224312
Merged-chr13-56129773-1	4.83413173711583	-2.57088825658376	1.21982396611932	-2.10758956045325	0.0350665073719293	0.469087481496406	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	0
Merged-chr17-26544530-2	4.51323282483238	0	1.3730362475366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90332199-5	11.2413980937321	-1.27003801930112	1.03746166999176	-1.22417825741091	0.220884989422059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	0.577068348605183
Merged-chr5-127607747-4	6.82654173349863	0	1.37367487291309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34244180-7	31.75428056135	0.923086895210608	0.412470167296958	2.23794826486453	0.0252244290680693	0.376799873512278	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22685689506328	6.21414641956297
Merged-chr13-35953137-7	19.313310893559	-0.0862389928630384	0.426285295456691	-0.202303466204829	0.839679490361318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31745993239981	4.10874996398897
Merged-chr12-12316911-4	12.9189524750152	-0.434181493142397	0.494242955296151	-0.878477858894792	0.379684448112337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79702549369374	3.23309453259338
Merged-chr15-90649579-4	10.8133311967507	-0.972591173734718	1.09892515594103	-0.88503859291661	0.376135816903732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	1.02674429890598
Merged-chr12-17239017-2	5.76041764426363	-2.13596789843377	1.24637160170797	-1.71374884946572	0.0865748611670647	0.831470473176761	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr15-58423906-2	5.60434412517246	0	1.39406191453545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105059076-3	6.63859553887578	0	1.36811271892621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111233958-4	8.81625209344936	0	1.36470558624251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5885653-1	1.61731581643848	0	1.55050752998917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108766630-4	7.38506011153291	0	1.36287213727721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118988569-2	3.02150296277261	0	1.55104267756125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151228524-2	4.34558541764422	0	1.38725774985372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-71379146-1	1.61528005200993	0	1.53915563062263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35520168-3	9.49983466521816	2.0767039805623	1.02430805493739	2.02742131193066	0.0426193442285308	0.528816464943781	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.37206576310547
Merged-chr10-7207585-7	21.572506128856	2.45986460841525	0.612073549549525	4.01890362722857	5.8469578615439e-05	0.00376581495729461	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	4.15402365706658
Merged-chr8-82376325-5	14.4589655112319	-0.40643471925202	0.815967133344031	-0.498101826217377	0.618412273452456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	1.80619472002103
Merged-chr6-83416527-5	10.5725955930422	2.79027193439838	1.12505107503178	2.48012912153304	0.0131334813405542	0.243659696993579	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.838451940269823
Merged-chr11-106480741-3	6.56159825355794	0	1.36057276406639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79602094-2	7.21456524726694	-3.72890395252211	0.854767233697754	-4.36247881939827	1.28597039339937e-05	0.00108210626338694	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65169355391977	1.06702908365212
Merged-chr6-140768373-4	7.5604124944578	0	1.36148824753435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67295817-6	44.4721689537417	1.77271753060953	0.340383077289127	5.2080072391606	1.9087947999185e-07	2.99020681639105e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24454380803672	6.00419231093412
Merged-chr13-97699116-4	7.71621630887229	0	1.368590900114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117138731-5	13.5001847813042	0.0133958837572885	0.554464212062471	0.0241600512095435	0.98072494333764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68371247208473	3.7194916468026
Merged-chr14-20828592-9	22.4308526037768	-0.567451652088208	0.462573449615294	-1.2267276744053	0.219924962546188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2184141619722	3.03524400059859
Merged-chr1-59475802-7	20.1029757947926	0.396063241221119	0.485612902338043	0.815594559605448	0.414732062074512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30844833993612	4.42302685305619
Merged-chr3-65315925-6	21.5213136264592	-0.0383160315551039	0.529731111576581	-0.0723310953760447	0.942338418966744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14974121666416	3.11528250206602
Merged-chr18-39582089-3	4.83253679625832	0	1.37648853374829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146793791-3	12.6761507227854	0.478600318440633	0.665967322543226	0.718654357713728	0.472353912144577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62778741030123	2.99069574473137
Merged-chr17-17845521-5	21.3444538167777	0.416028399338907	0.70317251666284	0.591644851697733	0.554088432919946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94822387057749	1.9559100095816
Merged-chr16-30733028-7	20.8452798355492	-0.847607659445314	0.635892236226931	-1.33294229927165	0.182550739943451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29969394493008	2.36697823512816
Merged-chr10-94098240-2	4.27198999643849	0	1.39204153805915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19161010-2	3.58038846253266	0	1.44531318165333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84060754-1	2.55730993404371	0	1.54568942056111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92398385-4	7.33279210291345	0	1.35782862951719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63691276-3	8.92080831740483	0.583137741888697	0.918012756572984	0.635217471340591	0.52528658996071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48545968646567	2.77440368183082
Merged-chr3-130818898-4	5.59590575500106	0	1.37487140262904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34661283-4	14.360943841469	2.11043490268948	0.794446130173366	2.65648584911469	0.00789597647407069	0.171226227798718	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	3.18926601939951
Merged-chr17-86972995-9	37.1693465365443	-0.165477513142337	0.310075757651376	-0.533668011958505	0.593571244201147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44880283155459	5.31294061922774
Merged-chr10-93375319-12	55.6209332959286	-1.39640116681647	0.286398868682069	-4.8757216578485	1.08411384501405e-06	0.000136100102773946	C57BL6J_F1_Control-BALBCJ_F1_Control	6.53561649822967	5.05989196298067
Merged-chr6-146913639-6	32.4899642354856	1.17049218695819	0.427637548562503	2.73711275095647	0.00619810455983508	0.143322637920367	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98228669229723	4.55194674029363
Merged-chr16-10969642-2	4.84576366617785	0	1.39207210663241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79291407-4	11.5638051768113	0	1.35085742527954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62054201-3	8.92563816092316	-2.9512587150012	1.11232706967531	-2.65322924835649	0.00797257028193173	0.172220150960071	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6995072319729	0
Merged-chr13-20798095-8	33.3881980722282	1.3916070385011	0.322454146760809	4.31567418958756	1.59116521651629e-05	0.00129288714506142	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13558997742124	5.45064713751954
Merged-chr13-64181063-5	20.2632891642908	0.0705408825301432	0.508022667662816	0.13885380913153	0.88956567224968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65658749275998	3.17473582214647
Merged-chr3-104518616-1	3.13871169413046	0	1.43075869775095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24860540-4	8.7165504867537	0	1.35548713168766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64234349-2	6.43845271856343	0	1.39063132618219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136680013-1	2.88030740959803	0	1.58102410316954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107081451-3	7.0421230482237	0	1.36070440619729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157402997-4	9.98335009685703	-3.53176809762235	1.11863737912197	-3.15720551050642	0.00159289040346831	0.0519031011591259	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	0
Merged-chr1-180430008-4	8.02434424620657	0	1.36387751724465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129718031-1	5.14303706827159	-0.469064420209712	1.90053032208628	-0.246807122600813	0.805057497949601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.55634759613363
Merged-chr8-40580512-8	31.4905548797848	-0.59940049422484	0.36433857747089	-1.64517438253634	0.099933854786345	0.911001913857274	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45369105123649	4.79311523137885
Merged-chr5-99361954-4	7.31529045166826	0	1.36819746198842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36307190-2	4.87061731049667	0	1.37565336087994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53462154-4	12.0488839597068	0	1.36073004066169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31768754-2	4.99413019393951	0	1.47501134763441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105643231-6	20.7716180013606	-1.42861474221561	0.594627185175456	-2.40253856169403	0.0162817178356224	0.281238608143183	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19377305386355	3.02113653230686
Merged-chr4-45940230-4	5.73686180596565	0	1.37233634275551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83843021-1	5.59347352764443	1.76713220520814	1.04936299133565	1.68400469599075	0.0921807611943267	0.86377260309693	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.04003754058864
Merged-chr8-64951094-4	10.3660719015012	0	1.35054883903928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151683199-4	6.54171752778426	0	1.38184508713025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104370596-3	8.35181594885711	0	1.36758401450253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104190640-10	32.2397645047221	0.426819182149225	0.346873749326493	1.2304741508343	0.21851960096422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47294443766753	5.03084142093464
Merged-chr2-128828713-4	7.67886543414016	0	1.34945420564827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62351541-4	7.83377042348924	-0.034814160180434	1.28265934996255	-0.027142171599537	0.978346339066276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr14-44078002-4	4.87075742195218	0	1.40069448935964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71644229-8	53.518950731603	-0.496756584540874	0.42267402473003	-1.17527114389904	0.239886255247741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98780445009588	3.34289887411841
Merged-chr9-100435435-10	73.5634131461743	-0.703537349142298	0.308674754770221	-2.2792189457347	0.022654053423537	0.351441692365881	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65683020231765	5.02052187708487
Merged-chr14-8114374-3	10.5427126369267	0	1.36014793873646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35274947-8	26.5579269694599	-0.268149642617347	0.360493667908262	-0.743840090654756	0.456973222866253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07383425067824	4.82174088905417
Merged-chr10-68136622-6	20.7505520342084	-1.57937639516999	0.702992146483007	-2.24664870450038	0.0246624869001342	0.370646426708431	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14349016941205	1.30139522650344
Merged-chr6-136721213-8	22.2945086834965	-0.0949485107438982	0.377979485341919	-0.251200169390167	0.801659353606935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27845065001268	4.3122766590786
Merged-chr6-52486293-2	3.36473394660566	0	1.43830279516222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46848900-1	5.23790736334368	1.72315398724947	1.01343204063067	1.70031528327951	0.0890716372051095	0.845884892877804	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13132003301738	2.11826221929696
Merged-chr7-98711213-1	1.97948158378285	0	1.50086724242264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33243469-3	6.57897479365386	0	1.38939709726709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81961505-3	7.53370254183045	3.50650478062343	1.00798702114383	3.47872016907954	0.000503814384133633	0.0214967394875355	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	3.71960059754976
Merged-chr3-8789956-1	2.6499070431475	0	1.43855766518243	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31118739-1	5.21292504833106	-0.706374490382497	0.754425285958192	-0.936308079182862	0.349114589619222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26230735005113	1.78692381606422
Merged-chrX-93602417-1	1.51506964441621	0	1.50335138391355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40476715-3	5.51888828996444	0	1.38264256360376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139365323-1	6.29447064110618	0	1.36958895204248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131787245-1	5.09235416349334	-0.908903227917292	1.45463772230221	-0.624831333590605	0.532081763396395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03684876101986	2.93959853314363
Merged-chr9-83537650-5	13.8563730412768	0.988127611496301	0.849939498640107	1.16258582296421	0.244997585518631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20997209872237	2.48629754829693
Merged-chr17-37542488-2	2.96902488697131	0	1.43055212629915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41523682-1	3.46686423826575	0	1.40675091403408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186675449-1	1.77618452721193	0	1.55107391522332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106758997-4	8.47513255841164	0	1.34770324085685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127020354-4	11.0833207955501	0	1.37606624903844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122272507-2	2.452116008533	0	1.45174082411111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115643103-5	12.9435713004774	0	1.34334064891944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62218261-4	6.1644194916803	0	1.36261868379089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-153827896-2	3.91180103848413	0	1.39151620372976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92940784-2	4.28808316576449	1.19553316892845	1.40889104190475	0.848563255333178	0.396124360526412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr13-25562918-1	2.21737903749586	0	1.45626025612621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179834195-4	9.10270894205734	0	1.35792889648963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44540595-3	5.20100808090813	1.20217087711916	1.39427014049211	0.862222350035305	0.388565172984054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr10-40314771-1	2.86699436931499	0	1.41219414500298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31097793-8	25.2509219269181	0.994764927522076	0.351035514858333	2.83380138309804	0.00459979110788877	0.116189611911583	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06530892752065	4.94914200861114
Merged-chr5-53194620-4	6.71212581228766	0	1.36908041754773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169777386-3	8.70384507950092	3.44663462313003	1.09259894282928	3.15452860882784	0.00160757616157567	0.0522644931621363	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.55134277539539
Merged-chr4-59096608-4	6.43860491762686	0	1.36093565743262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38797282-4	8.53385350326217	0	1.34554980945178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64103616-2	5.58130352854305	1.02320363472528	1.30372056077114	0.784833549085137	0.432551167076735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr13-112602820-5	14.0766610073078	0.244741980609022	0.613513369305259	0.398918740574744	0.689953079990521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60450854562673	3.84294557590443
Merged-chr18-53921406-14	54.1350450330211	1.17259334427862	0.244793590506877	4.79013090927183	1.66672538883854e-06	0.000194007549061829	C57BL6J_F1_Control-BALBCJ_F1_Control	5.1074141996955	6.27943980476884
Merged-chr11-100570635-3	5.55859259821352	0	1.36402130195598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46808116-2	5.8461752232847	1.18725024302124	0.914629746436625	1.29806651013346	0.194264481161986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	1.5682414637086
Merged-chr7-38025072-7	32.0721725207179	-1.58425073284101	0.369419510438143	-4.28848690466306	1.79894403065809e-05	0.00144005465528567	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10376387657185	4.63576704523482
Merged-chr7-80375534-4	13.796003506793	0	1.36187558259403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50061604-4	7.23491688381016	0	1.36169178728713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45514356-6	35.491259433348	0.45236860044141	0.506765669754376	0.892658337848079	0.372040167710769	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78469821888068	3.41483274526703
Merged-chr17-33817149-8	49.1737357213788	-0.309264641296358	0.241054021988662	-1.28296818590691	0.199503222224626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.15043899800683	5.81580826324842
Merged-chr16-24487862-4	7.46076239580147	0	1.35837951948343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81193968-4	11.1466558245446	0.712808231250935	1.08207476195181	0.658742127914705	0.510061375537909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.10718024078827
Merged-chr15-5126654-3	5.93384726004512	0	1.38126483268405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41122498-5	12.3707856798309	0.818391249539963	0.496328974047391	1.64888872568987	0.0991704332934993	0.906627242415293	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35129661436606	4.28378739706842
Merged-chr16-76200438-2	4.12664915079483	0	1.38402452527727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-65545753-4	19.7571120509518	0	1.34552434476913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97299547-4	14.7847271643099	0.821249736908244	0.738751364612532	1.11167271730047	0.266278894379386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4028653962853	3.25881105664687
Merged-chr4-130799174-6	15.0938013961276	0	1.35159747998783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75599954-7	21.240510871337	0.899402167861342	0.394722850548318	2.27856625632887	0.0226928617317329	0.351542111962174	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2911125145029	5.13397745373982
Merged-chr18-67324529-4	7.53640061487288	0	1.35130025769955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154118573-4	6.41403947434565	0	1.38208932130436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25056664-4	8.0417078223835	0	1.37850303112742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94039026-4	16.6733085274991	0.783316587979426	0.465097536747686	1.68419853060708	0.0921433071449893	0.863738236436364	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43887531883344	4.2735237561123
Merged-chr13-92337042-8	25.1681835081904	1.05634196786724	0.505278129657552	2.09061486311146	0.0365626023071516	0.480353563243548	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65057583602424	4.16256167733895
Merged-chr17-88496543-3	6.35822953284754	-3.68773802184769	1.14199189646151	-3.22921557786377	0.00124130285246533	0.0426793053492491	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23123803868452	0
Merged-chr3-26932625-4	7.39008409729008	0	1.38953102765012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150891747-3	8.77650048850565	0	1.3449174803328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89515690-3	7.22980621636992	0	1.37205164438891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35573975-4	13.4066369625636	0	1.35871146756723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55969332-3	3.86770436199863	0	1.4117087485481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3659692-3	8.190086503527	0	1.38252180519793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128050855-2	6.47092489625951	0	1.39274546705801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53800220-2	3.72895064573343	0	1.37275728907406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44986282-4	6.27038276881358	0	1.35681225550072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44714671-5	18.4691808029169	-0.733599037364764	0.565880710557754	-1.29638459780985	0.19484301577188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50194508176053	2.28144814127203
Merged-chr9-71951433-12	67.8407612087019	0.494120107760209	0.231055925182353	2.13853034658273	0.0324737238664451	0.445767463549518	C57BL6J_F1_Control-BALBCJ_F1_Control	5.41456789414129	5.91980638321882
Merged-chr1-55430438-7	25.8069722961717	-1.12958888702515	0.377718890993616	-2.99055438835395	0.00278471533688984	0.0800075798086654	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31269258215286	4.13375533728114
Merged-chr5-41519151-4	18.7931147142276	2.39504406826946	0.694938929570039	3.44640941291241	0.000568088988754079	0.0236452904591753	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	3.78054662499336
Merged-chr11-118254331-4	5.79851491672851	0	1.3602324062124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108146625-4	5.71432301200679	0	1.40545533772173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74454100-4	7.81975567564445	0	1.3613778779184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21825099-4	7.31730302985459	0	1.36122492779176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136728434-7	27.5107594724863	-0.234727964473615	0.409292529190859	-0.573496821302003	0.566308350740745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29069640235573	5.11303518960956
Merged-chr17-42837332-4	6.23574970172058	1.77466927478758	1.18248671707312	1.50079425769806	0.133408784374236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.14143228603163
Merged-chr10-127114543-4	8.99740723891882	0	1.35054910399049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50939147-8	22.4134455489516	-0.0171157201634382	0.420283420468201	-0.0407242335288199	0.967515742055949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6867213312228	3.70219023848842
Merged-chr16-21666687-1	2.35017481583372	0	1.41519108304556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99213939-1	3.63318001630466	0	1.5236877787392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41484219-2	4.01402806403068	0	1.42380557369331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46199542-2	2.1767016100435	0	1.52258178753753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55755096-2	3.8725913930354	0	1.40074944358913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72184588-2	7.7206912669257	0	1.36508905678102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120576281-2	4.03120309720813	0	1.38302355248927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21676819-2	3.26834373773537	0	1.4100825657058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46120775-2	4.07581394927958	-0.69503858243379	1.37647125788085	-0.504942314236068	0.613599352957085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr17-70122276-1	3.20602960723226	0	1.53972537981864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6476099-2	3.11789173490181	0	1.43462132576263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97246620-1	3.69975909672413	0	1.40302700029557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50275097-2	4.92310311775211	0	1.40070609827948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76406492-4	9.6506584302319	0	1.36853457469448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89145568-3	6.51783764481347	0	1.36530046152472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148531877-10	30.9417765189767	0.0311390498510207	0.425179605354957	0.073237402403214	0.941617203475735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03929583948814	4.01071610230142
Merged-chr5-43848538-4	11.5816832699428	0.16412114985166	0.710210196197965	0.231088135217243	0.817246332408337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	2.52786947451291
Merged-chr17-72899071-4	9.00452069248457	0.535429194777813	0.872125340041073	0.613936059640919	0.539257580445061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20724342340814	1.45526469271556
Merged-chr8-70729200-6	24.5770934588627	0.38954039923567	0.554335993133383	0.702715327997726	0.482233173386167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42446949337354	4.00394071049725
Merged-chr5-147758195-6	21.9005949651714	0.714489951512432	0.549699055662466	1.29978384381863	0.193675064341567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10017999916555	3.87411794170976
Merged-chr1-181245168-4	7.26126884437915	0	1.38778191107857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84809158-2	4.79320540083826	0	1.37123014236318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146872942-5	14.8510991396036	-1.78171019721764	0.810126620382146	-2.19929842124826	0.0278567098981187	0.403715390098508	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63241967456076	1.25560888218618
Merged-chr11-5512467-5	19.6521080709747	1.25605440070714	0.922028011202983	1.36227358111208	0.173111561909072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.3626301568499
Merged-chr5-74471009-4	6.89491467015285	0	1.3576177963948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-3983132-4	7.92224287645083	0	1.37834370963995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117938452-4	7.04649919930116	0	1.37721645822538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171466877-6	25.1306756424413	0.0488936032825653	0.340518377873668	0.143585798769148	0.885827555384188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50479799293674	5.6328875820392
Merged-chr9-121598319-4	12.5595676093019	2.52272655194598	1.11899081664785	2.25446582260906	0.0241668784319116	0.365954990004175	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.47418322843784
Merged-chr6-54171904-1	2.95760382640631	0.421731512313909	1.38953571565132	0.303505341794132	0.761504777183944	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr9-31543538-1	2.66862920565248	0	1.49414956335176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-130228479-1	3.40566414124289	0	1.38867332972457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83822016-1	3.05924324539942	0	1.51554119499593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36922271-3	6.7330129174986	0	1.35076714125498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33276511-3	9.31584082442098	0	1.40165779388955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106261602-1	5.41852926014599	0.679521248218138	0.871846602078254	0.779404595485418	0.435741417629936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	2.00836863046658
Merged-chr10-42245064-3	5.98433560756558	0	1.41315353388327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117365158-3	7.32802835222729	-1.59724725085917	1.15378875351284	-1.38434981793345	0.166251366689054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	0.55634759613363
Merged-chr10-60260313-4	7.83217791126709	0	1.38503026439076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178449360-4	5.6576997527452	0	1.36064057957673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101997557-7	24.1258001029108	0.198254941640412	0.362374268799961	0.547099942545462	0.584310071745067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36091188282557	4.60122032726457
Merged-chr3-41580070-2	5.22297716821167	0.89175723269804	0.829354931838016	1.07524197236246	0.282266408353436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	2.16696648475163
Merged-chr2-79131438-4	5.63169857984968	0	1.38882699940257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104701122-4	6.42223843343587	0	1.35736853671523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5411136-4	7.10677510385171	-1.33746337298974	1.31822510063133	-1.01459407224851	0.310299366172889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	0
Merged-chr16-38679643-5	13.4608368465056	0	1.3467880072518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17860325-8	23.5406868119789	0.364388841047183	0.382241473716776	0.953294883216097	0.340440683288735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13196208624228	4.51729002216932
Merged-chr11-68914749-2	9.56510711645465	-0.533887380822689	0.696444203842483	-0.766590313878813	0.443325136236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31465917458896	1.95490602299383
Merged-chr11-5960783-2	3.84148022417675	0	1.4229541287967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132010631-4	8.09344777085024	0	1.35833834596596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61513482-1	2.89579485380233	0	1.40888971655978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57028114-7	23.4995643901406	-1.08648210221815	0.512731624434648	-2.11900739186145	0.0340898422606748	0.460166311260994	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99095559667253	3.32131696636595
Merged-chr2-52967149-6	14.2043724682755	0	1.34319338038535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33873732-4	6.73381844304496	0	1.3578683320837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58280691-3	7.18208170736342	0	1.36721535358403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97343727-5	20.1291892557868	-0.61287222082789	0.498581679876471	-1.22923132871576	0.218985085918368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38085765488006	3.10804647421015
Merged-chr10-44565336-3	8.3793834120035	0	1.35680781714166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11418480-4	5.90499531136869	0	1.36074242649493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3913631-3	6.11761605842682	0	1.35804611922248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107640309-6	49.3502868960526	-0.139590944833576	0.433973622730345	-0.321657671162915	0.747712048412538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95013472792649	3.81920872400572
Merged-chr19-41372582-6	21.7776527950986	-1.66104956169754	0.607242601898808	-2.73539695091146	0.00623050911122197	0.143510273210557	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85325874715886	1.81930970870026
Merged-chr6-115507571-2	5.14272495909193	0	1.35290892562201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114175746-7	47.3333410605179	-2.100207466915	0.327956312460081	-6.40392450799567	1.51433009418836e-10	5.2099664297459e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	6.00687396929395	3.89322384666492
Merged-chr3-51208891-4	8.36499014659094	0	1.36119890030481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83814327-3	8.94766908749644	0	1.35914446940251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108401727-3	8.77592406335323	0	1.35503645363328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22363758-3	6.59836812369977	0	1.37929889454811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96706874-4	6.65173520727601	0	1.35832483205269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46770494-3	5.92736527020385	0	1.37633515263866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117872844-6	33.1130221088157	-0.835179320064634	0.496078393390547	-1.68356318515796	0.0922661185850882	0.863846699994284	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76756050375901	2.61175409194645
Merged-chr15-83496089-1	2.35295408405838	0	1.41429011051398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5485463-6	18.6374987482245	-0.540827073946682	0.466141379722711	-1.16022112061452	0.245958789987523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10653591947561	3.05427012988678
Merged-chr2-16310872-1	2.40224208898876	0	1.47481055442621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87722501-4	5.99011893774961	0	1.41632998519381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173621907-1	2.89963363144931	1.09586395661046	1.65472683626007	0.662262756967958	0.507802840702946	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr4-137804744-1	2.25991207851842	0.608893112215082	1.52011373352487	0.400557602228333	0.688745866096559	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr9-13312972-1	2.59022663814519	-1.2529639555415	1.25777061615363	-0.99617842828383	0.319163458647994	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.71701424649985
Merged-chr2-59969321-3	4.3656140554351	0	1.44398611407921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32666647-3	5.62719927015605	0	1.41656175456882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59662773-3	6.41862763587271	0	1.43198575674923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3128418-2	4.97984806301883	0	1.41856810264989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44410768-1	3.14097757213747	0	1.41719183360897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8494443-1	2.4793848900258	0	1.44751424447746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110703119-2	4.5318619475093	0	1.39243132132782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33687592-2	4.40309889001301	0	1.36160793678128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45947963-3	4.89103218042653	0	1.43541396724664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22496820-1	0.791144493835153	0	2.15388828177993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-108178589-3	8.13057523434322	0	1.39497286271683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90609267-1	3.1249726419985	0.129848414199252	1.24759210135805	0.104079221131576	0.917106480425895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.724326877898254
Merged-chr17-79598363-2	3.19698987695253	0	1.47771558642747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52712134-1	2.97483072273179	0	1.39568349650655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77368333-3	5.42346233645145	0	1.38894332712466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171851776-7	23.1062819372986	0.368026894730831	0.487700809158803	0.754616124926288	0.45047934565392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61958354526469	3.83303001581078
Merged-chr2-84094982-5	21.2302031016362	-0.410289695945423	0.615385255379171	-0.666720062528346	0.504950961298011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09928038700072	1.70335298395442
Merged-chr15-51696906-4	6.46037691782234	0	1.3542277339478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129020618-3	7.1182194878088	0	1.36084609784623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92485815-3	4.74713456671239	0	1.3564647913891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138447600-7	18.0930901639058	0.109645303097124	0.484664824897943	0.226229132927508	0.821023213104256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54478789240983	4.53402692908377
Merged-chr2-22826412-4	9.18899730766841	0	1.36115232785921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78185088-5	18.5719683904634	-0.241369593361819	0.427965686332285	-0.563992864545718	0.572758988256562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48693201574258	3.88663291088947
Merged-chr12-84019228-4	8.88516491087639	0	1.34347027564769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156411514-2	3.96058387228324	0	1.42130001376594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166683118-2	4.82396623763306	0	1.38110259118414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70038269-3	4.50923447746615	0	1.39936448848631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36173171-5	19.2822151891835	-2.39446618531528	0.627703293705254	-3.81464652062131	0.000136378002066316	0.00759566784254394	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54001355670896	2.30741877293786
Merged-chr10-67582110-4	7.19739129086406	0	1.37929016361863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117338655-3	6.14622537751583	0	1.37026998597326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123256850-7	20.6364210081607	0.700327333605703	0.487554198893792	1.43640919346951	0.15088593865976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63330004769678	4.19303653449839
Merged-chr1-186549433-3	7.1833933661058	0	1.40849676721046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35734232-3	3.71715033650168	0	1.39555557498714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84957880-3	4.91452719858337	0	1.37757661714344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96535868-2	4.82912288181528	0	1.37360658348211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104357857-1	5.1481719982124	-1.35309884961001	0.975842119446427	-1.38659607189081	0.165564966790768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32016527145042	1.66569775432524
Merged-chr8-79491507-4	10.5023943572807	0	1.37056606760358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91498444-11	39.7495198602809	0.723332873753632	0.294209277530159	2.4585658203096	0.013949320372283	0.254112300977524	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88674138062175	5.61279569061214
Merged-chr4-24568193-4	7.57663395013228	0	1.36333076428412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23121456-6	22.141469427875	-0.966596683550098	0.447946885182402	-2.15783771586335	0.0309404513896466	0.431033315502255	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0728993558318	4.36277997567501
Merged-chr3-84169114-3	6.15456644369231	0	1.36111623527853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24427752-4	6.96589445034223	0	1.35380370127287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44510240-4	6.45945710715064	0	1.36188624994476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99937436-3	4.97180541356254	0	1.37610490147819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95849810-4	7.62636240839242	0	1.35310178509667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72268591-7	36.3216837697553	-1.5137980631977	0.362890065270192	-4.17150594098131	3.02593166193602e-05	0.00218732206397846	C57BL6J_F1_Control-BALBCJ_F1_Control	6.47672157407641	5.04159730713396
Merged-chr8-41292215-3	7.26881555578971	-0.604819809409819	1.23282770208745	-0.490595570156093	0.623712520170571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.465515277017237
Merged-chr1-164218280-1	2.95590004972786	0	1.49526350519217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128111334-3	6.7743002495816	0	1.36395797150362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125337035-1	6.39253342399486	2.12199932351298	0.779537415545017	2.72212632927873	0.00648633417710554	0.147960822296802	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	3.402336287297
Merged-chr10-17771858-1	3.68955002583467	1.85457615072926	1.37964016605558	1.34424627258535	0.178868763015578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr8-119412766-4	12.0402640635704	0	1.34325758456547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68052930-4	11.7519623477675	0	1.36448133212994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120748266-2	4.86413748804068	0	1.38015576296293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56701022-3	8.07175701399384	0	1.36636044264144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34445827-4	9.02747789856141	0	1.34716743872531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85657731-8	24.1486349613156	-0.21556147615866	0.373861333572712	-0.576581359989011	0.5642222940852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26692287789088	4.14678518209128
Merged-chr17-5521750-2	6.80812332958913	0	1.36108243819754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19239628-4	6.56845800333649	0	1.36954868545186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45675989-3	6.99001535750477	0	1.36485421829075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119428942-7	21.4080837626026	-0.426167634044832	0.424949964743861	-1.00286544158606	0.315925788669358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13889433705777	3.88968324994585
Merged-chr7-83571313-4	7.59780522016075	0	1.37728148389096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-110041632-3	6.67861236245648	0.485217513616526	0.895773221774982	0.541674501784128	0.58804275819762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.75107117680423
Merged-chr11-69850173-4	10.5681668074511	-0.738910555904145	0.796550041967081	-0.927638587626466	0.353595074324598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0292145465841	1.2636608194585
Merged-chr14-48896482-4	12.3535010061183	-0.973406862691455	1.02029173253199	-0.954047584288291	0.34005955638487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.67591700901439
Merged-chr19-40722527-1	2.91042039524861	0	1.39820945412145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8669351-2	3.86158231816556	0	1.43051206831989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119962929-3	6.64782149135725	0	1.40334501600553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-27168417-2	2.80228266904743	0	1.51675000945149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77361205-2	3.82419669146439	0	1.40148713136907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72241727-1	2.42837173932689	0	1.51539233241625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105117797-2	3.70176964747958	0.287708503463588	1.16116736304364	0.247775223986188	0.804308325671977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.18909650862134
Merged-chr10-68241636-3	11.9843947917384	0.64293100954082	0.505982612208653	1.27065830727735	0.203850234056908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35496993648012	4.06769775283379
Merged-chr14-51897084-3	17.333640536196	-1.57087172335019	0.649740434773685	-2.41769118755454	0.015619326240046	0.274064220491497	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19562500384098	2.07569703507273
Merged-chr1-191119916-1	8.85969483392783	-0.86594117513335	0.66449052503393	-1.30316557198334	0.192518241126604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33344304526824	1.78692381606422
Merged-chr11-98954593-6	18.0957657166375	0	1.33702630853875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154074293-3	8.3494508148572	0	1.35218037993177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31409039-2	2.70341823836629	0	1.44488524323196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57835291-4	11.0661732526494	0	1.37067521728208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48140574-5	13.2075615541482	0	1.34904439444974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-92303550-4	15.5383667442425	-5.11667604185267	0.790381462230681	-6.47367921232864	9.56448502022896e-11	3.5129448730718e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.89878949171063	0.953310774576147
Merged-chr10-99203749-3	7.56536090269767	0	1.36104511224827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8575633-6	56.6706944629154	0.157117490140574	0.561571359416962	0.279781879018362	0.779644855159406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2758534078984	2.89948922819089
Merged-chr11-121697777-3	6.11195817984356	0	1.37812182786784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25464754-3	7.13981393215494	-0.69689385709404	1.3586299129915	-0.512938696866745	0.607994203493102	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr11-85324085-3	5.00053095254962	0	1.37430213520055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71263383-9	42.6468059055416	-0.36578519071463	0.284142595438513	-1.28732965977917	0.197979409857181	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38376641980002	4.84868821820537
Merged-chr3-126971280-2	7.92385360995438	3.64693131501196	1.0721717555656	3.40144318863174	0.000670310594894683	0.0268119305576748	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.65217395680289
Merged-chr7-102247104-8	24.4621177765056	0.510227870362187	0.487749780021499	1.04608529057603	0.295521655857994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69899581190143	3.83728030393572
Merged-chr10-57731850-4	5.7937281684812	0	1.37469901605427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52755011-8	44.0824011223276	0.982037761208648	0.303093153117229	3.24005260794796	0.0011950764852366	0.041325167087135	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15019426219887	6.16129024762835
Merged-chr10-96606093-2	5.97468881739502	0	1.3797035724856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40708394-8	60.7228069064983	-0.693392421900373	0.316141021515086	-2.19330101034448	0.0282856989061205	0.408063244914491	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44966914184001	4.75133160975289
Merged-chr2-118905933-4	13.2566107608342	3.31120574851154	1.00677756724248	3.28891490657741	0.00100574425646724	0.0360628311591706	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	3.27017043784716
Merged-chr7-67308325-4	7.39394154274224	0	1.36936455343513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20901621-1	3.72710275829856	0	1.40437960067608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47795600-3	7.62724816832634	0.197319711018056	0.849761055523213	0.232206112218879	0.816377930630181	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87697405107109	1.70340695421451
Merged-chrX-36820377-3	4.5886049191853	0	1.37282770720245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68465561-3	4.74901540301051	0	1.40262194938008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79940912-4	9.13380651078756	0	1.36346036671998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114294127-1	2.98338014665327	-3.62776730117583	1.2449808801663	-2.9139140680548	0.00356928141494507	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10822668382129	0
Merged-chr17-50130583-6	15.3180209663547	0.00601040176298018	0.517015530940031	0.0116251860984759	0.990724652415437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56869631918596	3.58026766024736
Merged-chr14-104868315-4	6.76615548498314	0	1.38816284332109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52170246-4	5.26377330915809	0	1.39591792381267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104375430-3	7.56908852480205	0	1.36913705533201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3833044-4	8.17360507212226	0	1.35384174418089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112186586-2	5.68739183714671	0	1.39033317018318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-118126762-4	7.46004006400454	0	1.36237259512443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30975562-4	5.78140938126372	0	1.36504837655197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171051030-8	26.3501490522265	0.525007182880882	0.423906330637851	1.23849809482888	0.21553142806507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45096887235768	4.40307761841536
Merged-chr18-62250254-8	31.1936554027429	-0.0852725730600457	0.342973033980557	-0.248627631363228	0.803648832776693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15785159300249	5.06007183751789
Merged-chr19-48049474-3	6.40548821319317	0	1.38023434980826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16856931-4	6.89178630117677	0	1.36098842177863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31784468-4	11.5664002655599	0.169994220446446	0.659845908910611	0.257627149234132	0.796694674755664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86136436759119	3.5911195393402
Merged-chr17-6476754-3	13.7947634815361	0	1.37880065832401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99088429-4	7.74273276502353	0	1.35467094461293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11288377-4	6.92529136604135	0	1.40714726989622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19301234-2	6.2307101559734	0	1.42312076771648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160251613-2	2.94014635245381	0	1.43393008633694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17739252-2	6.29043852153074	1.41083813639122	0.853920422281937	1.65218924337356	0.0984959785552408	0.901978251058682	C57BL6J_F1_Control-BALBCJ_F1_Control	2.035112151504	3.02546972283186
Merged-chr17-66975823-2	3.79933155963171	0	1.41728044255954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94093590-7	28.8893669035499	0.486218970127759	0.405960869005807	1.19769910661218	0.231034177260222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55442902196598	5.1990000567863
Merged-chr11-119034354-4	8.56473125615278	0	1.37709048394149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13426538-4	12.3294600701904	0	1.34502020902167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-29853376-3	6.55536314865048	0	1.35769758450268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102046198-4	9.24083715476031	0	1.3529546347865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66140180-7	18.7107617490535	0.567882502051506	0.453733506518035	1.25157717888074	0.210723974562014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09816549901739	4.62833850693507
Merged-chr2-129601218-10	42.8448677023409	-0.290371201259401	0.334299352841397	-0.868596360691023	0.385067945756211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95680047446523	4.71351521429946
Merged-chr16-65197403-6	18.0342883876867	0.764276024063896	0.723359539534168	1.05656451915472	0.290710380632806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69736543272236	2.88636870621219
Merged-chr5-45719301-7	24.8405717299342	-0.774710942497294	0.474614793633905	-1.63229413176461	0.102617538861607	0.926917048018961	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37564272173116	2.77072067001669
Merged-chr17-71868116-4	15.8242309925638	-2.31162477786497	0.610459904137919	-3.78669387161374	0.000152664991492928	0.00831534696649707	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38818421418427	1.5459422068545
Merged-chr2-165969045-9	45.7436049084496	0.34638436770436	0.304335834040708	1.13816491178633	0.255051627289203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96104724803388	5.34082557550932
Merged-chr12-70714425-7	11.7045949800802	0	1.34936754941216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135712508-1	2.11987851435295	0	1.48253628813507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160279923-1	1.96419462293472	0	1.46995245053431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21915642-1	2.59662377544769	0	1.43107440347489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62732825-1	2.82873363638561	0	1.44750477853185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166190178-1	1.96531291824656	0	1.50214914464875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56469368-2	4.95716357059144	0	1.38515700900863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46457194-1	2.1922375046622	0	1.45650447908437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136725510-7	19.7381235942232	-1.9168023874687	0.69396071245608	-2.76211945872946	0.00574274625705821	0.136378306591275	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42414620212235	0.94927122251658
Merged-chr2-165060110-3	5.08150457150808	0	1.38098952402639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135460334-2	6.07316919293624	0	1.37277177550035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55483918-1	2.82075890991723	0	1.56874046243006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30209462-1	3.13065031320894	-0.294662814447077	0.98894662121686	-0.297956237602092	0.765736564699572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63900399389441	1.82070600302968
Merged-chr2-114548593-1	2.35444529485515	0	1.71525649712517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49763364-1	2.15794335937944	0	1.65650843330624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60928059-4	5.40271677021852	0	1.38530043689223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129631241-2	2.39280913322132	0	1.47154879928948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46326912-1	2.27537166664861	0	1.44775970862466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80614574-1	3.28913383594789	-0.180030517872277	1.32595390833839	-0.135774340827489	0.891999676243979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.07599819202159
Merged-chr7-81121270-1	2.84959010942265	0	1.45693834704796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121573394-2	5.33444040004661	0	1.40186831620063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3149913-5	17.5500249693766	0	1.38336741508499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119337701-2	5.87180614089653	-2.03674780852401	0.847174761799636	-2.40416487879949	0.0162094605817912	0.280079487528795	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6215190179411	1.17788344834821
Merged-chr14-25315622-1	1.36093705246795	0	1.89683143729877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33273124-4	5.48724733728458	0	1.39245391324902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46752553-2	2.75886445110788	0	1.42492473486994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150132827-3	4.32294180638076	0	1.37667567546542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47294488-3	6.03409770825973	-0.0834410777067661	1.13439728113099	-0.0735554281508643	0.941364138197235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.841757702988201
Merged-chr19-57623877-1	4.2707079282174	-2.23015685740418	1.26491445385876	-1.7630890773687	0.0778854671365245	0.78124906587396	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr17-36930458-1	1.41757287128541	0	1.637804233635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82763586-3	14.3301559953597	-1.0526607479625	0.551601185098173	-1.90837289041565	0.0563430381320567	0.640207192688226	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75565924429662	3.27557370476859
Merged-chr9-40576807-1	9.038369977018	0.288766431762937	0.695455497008634	0.415219137680282	0.677981490261864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08523240875325	2.94762453025931
Merged-chr17-32617437-1	2.63715197244673	0	1.4097171983463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136612137-1	3.91306114524246	0	1.4074928664952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38602171-1	2.92946706520173	0	1.45046342516162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93366165-3	16.5270368122606	-1.95574911570305	0.489814336264776	-3.99283763439264	6.52872747595962e-05	0.0041093414644717	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9726804847219	3.22710147738838
Merged-chr10-42118734-4	7.53659659616563	0	1.36134078912291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64371808-4	7.92858229544791	0	1.37137144880822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113197426-5	11.3972150867803	-0.532214814402779	1.19643185602715	-0.444835041562705	0.656438968863808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	0.600815099743027
Merged-chr1-105746700-4	7.66093750379164	0	1.35309356185843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126802763-4	7.22235988753735	0	1.36154112432377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-112927035-3	8.66432068855487	0	1.40789293122521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10844217-4	9.83217862037124	0	1.35338264328534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44571095-8	37.8982674100015	-0.200679985736037	0.401364610093791	-0.49999422143657	0.617079146321496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33478804568624	4.14249764301055
Merged-chr14-20885280-4	6.30149676999029	0	1.36783399134674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157518397-4	6.35132423561166	0	1.36386274213766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115311167-4	8.75520964668586	0	1.35483559174564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101356906-6	23.8123366437206	-0.126538199706705	0.326663820475705	-0.38736521088388	0.698485854980806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09289557728619	4.96735253021154
Merged-chr14-100224410-5	14.7256453337468	0.21758157031831	0.474974925570657	0.458090645641763	0.646887319182324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5340327709466	3.7521082821936
Merged-chr15-27884561-4	7.66478692737275	0	1.35636575327541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68395025-5	15.8416353961396	-0.123823623138036	0.590536093384582	-0.209680025531304	0.833917416296341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23403801052056	3.10757273364405
Merged-chr15-27659787-4	8.60711117573637	0	1.36044520745154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155511609-4	7.18080100643069	0	1.36393079344807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44087943-4	9.69355742459859	0	1.35167114734365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87521363-10	87.859998646608	-0.293517352180641	0.29776669921221	-0.985729273814665	0.324265980309919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24553215979733	4.89286226614317
Merged-chr1-43535827-3	10.8192027094267	0	1.37292237295245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51327593-3	5.22576774612444	0	1.38955022211476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24985208-1	6.14176065954458	-1.3474548115159	1.3684556803269	-0.984653599591924	0.324794251880853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr2-133020684-2	4.45531616613041	0	1.42170148609705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128769751-2	2.69934218698883	0	1.45117423148847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62854713-4	11.7444181571897	0.131414168360572	0.778524037373511	0.1687991148018	0.865954654620177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9094343094868	1.9134233865196
Merged-chr1-136726900-2	4.52986544956301	0	1.36555252147737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14804984-6	17.7880066795438	1.06267336408483	0.666313482811961	1.59485496166184	0.110744673115138	0.968307815001739	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72298046804482	3.67071240860099
Merged-chr9-63678312-3	9.02273518871119	0	1.36579149842491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108013284-4	6.47492212222427	0	1.36081269452508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146829704-6	33.9762394986222	2.43151356913757	0.339293683924177	7.16639797421326	7.6996732437544e-13	5.23183172321557e-10	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56604224162272	6.31599114253787
Merged-chr7-110786874-3	5.35650178012365	0	1.44446865805225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100487509-1	2.78040338564556	0	1.42741773879549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53856398-3	7.3932154236205	1.70531635590095	1.25638057455691	1.35732467568783	0.174678070169728	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr1-61690901-1	2.65515449595789	0	1.41513364130266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9395743-3	3.84261949498179	0	1.4902470252814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49797099-3	3.56943556479282	0	1.48219495615554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166793256-3	4.37901376546906	0	1.42823508960526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87322749-5	19.4647801337378	2.42238595868709	0.570693019075552	4.24463919781433	2.18945421426409e-05	0.00170023630904546	C57BL6J_F1_Control-BALBCJ_F1_Control	2.173597744938	4.49087755350501
Merged-chr5-105306194-1	2.43546999240636	0	1.64688430693222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-110805205-1	3.38176089101031	0	1.42062551453544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21113685-2	6.24307576239176	0	1.37216186764294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61127707-8	32.6271044152637	1.3714054036616	0.481694172811559	2.84704586658578	0.00441270040781705	0.112509372170979	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38863282318632	4.09603953418666
Merged-chr2-84296550-2	6.568237846053	1.19166653496895	1.1345668793964	1.05032727167474	0.293567670778192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.887876939341704
Merged-chr9-55311756-4	6.87118156470385	0	1.35621992141633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35290398-6	36.7232591829633	2.40945076818334	0.472920008301812	5.09483787085966	3.49039828195807e-07	5.08776030519058e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66904529407455	5.55582222693847
Merged-chr12-70234568-5	22.7217484780234	1.32259151317177	0.430464474563303	3.07247541045869	0.00212291322951333	0.0653081155875015	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98811808740116	4.86731653661258
Merged-chr12-41300490-1	3.45687427287278	0	1.41133679970219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72818745-2	5.9502839130334	0	1.37797156764891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65523551-4	8.10840156015655	0	1.36503766854498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10910662-4	10.8430564341537	0	1.35029758352394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105213442-4	6.43702403276308	0	1.36424170257121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45082714-4	9.23657270577691	0	1.35063003830705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87017804-7	35.7369601821597	0.100157408097754	0.456649340634722	0.219331112924722	0.826392127278382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12300468900511	3.7289629331294
Merged-chr9-61708009-2	7.39902225921732	0	1.36071736996398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107059699-2	10.6795965298333	-0.927203553827752	1.196714446017	-0.774790976171255	0.438463182342544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.465515277017237
Merged-chr11-118232337-3	9.37607763165722	0	1.35566482479119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83310144-5	13.2258819224957	-0.959696680556212	0.84744068290629	-1.13246472574923	0.257439106252309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23836617526991	1.39949824061849
Merged-chr12-35553465-8	33.1656819871298	-0.852130085803485	0.405129068492238	-2.10335459011826	0.0354347847817594	0.471992027922485	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53294328262397	3.69379269120651
Merged-chr16-14365697-2	3.85186120266446	0	1.41326985845369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99057270-2	8.99058965638303	0	1.44075878904106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98181516-4	7.84178296099338	0	1.35897722348917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119600286-2	5.07342636887926	0	1.48319361092938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35507365-2	2.89326641109291	0	2.10811710703516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12427730-1	4.08501820551745	0	1.37758390768532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108344608-1	4.15921026034222	0	1.40201549727557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-33900232-3	8.8759422480693	0	1.35227750272854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46745990-2	2.5207769188259	0	1.46568887473694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113121004-4	6.99691501120354	0	1.36340587375106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61269035-3	8.5412856768618	-0.29793880170431	0.93066447824939	-0.320135568368036	0.748865563683068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60230598860646	1.18909650862134
Merged-chr8-107505258-1	2.17292819726855	0	1.47763945439482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36159115-5	12.6111151424646	0.0462678130011711	0.715427579812375	0.064671553497148	0.948435512414259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00485567764722	2.01161228884919
Merged-chr7-101311442-6	19.3638206151269	0.199200900117104	0.471351388622183	0.422616555133935	0.672575045950997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65865761409864	4.03984121256074
Merged-chr19-46528830-4	15.830108377272	-0.615475350931412	0.654728375815766	-0.94004685555984	0.347193526994368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67236814559369	1.56616701786163
Merged-chr11-6508663-3	6.7982164599968	0	1.36074544195617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113172622-3	4.41872998954454	0	1.36786453532944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103795821-3	4.57163633589951	0	1.3893202273993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87416853-3	6.06620913647559	0	1.36347417945602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21139250-3	6.26546611094388	0	1.37323991262056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155210575-2	6.97978463446942	0	1.41749067105674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25068274-6	22.6089801549913	-0.718587952587608	0.673854292492669	-1.06638476684546	0.28624974491795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48354130786014	1.76908672986905
Merged-chr9-118811126-3	6.40887810046471	0	1.38843279604926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124291032-3	7.51807979108819	-1.49046570092327	0.902807972143445	-1.65092217493893	0.0987544672152844	0.9037363776693	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67983564697698	1.38950137562363
Merged-chr13-60892519-8	33.6262528270709	0.0566670345068374	0.34837810040382	0.16265957716961	0.870786475773486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38812438867324	4.41461141153849
Merged-chr7-123394243-4	7.60338187105675	0	1.35708657067162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94140261-4	6.22241704763833	0	1.36415684594842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125561021-7	19.0824488881232	0.19331242006575	0.474682119971353	0.407246053585115	0.683827280025681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56331334317101	3.52099293247738
Merged-chr16-33130918-2	4.81962135375636	0	1.38098207160822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78484576-2	3.81288738070338	0	1.38952140264657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102002302-2	4.10465550926887	0	1.39341110440194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5025571-2	3.24256257256737	0	1.45404878354401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84200128-4	5.51121646545189	0	1.36963082870155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148889145-3	9.57396600110807	0	1.35367970008974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-10755213-1	4.25261836876287	-0.448988286078155	1.2783333015903	-0.351229437205145	0.725416227479517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.600815099743027
Merged-chr18-34502664-1	7.08040110377858	-0.772889514586852	0.814024289441793	-0.949467386430018	0.342382951685044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56821354400587	1.62805269464997
Merged-chr8-39406309-1	3.02137852276466	-0.0905199997202095	1.1681610429792	-0.0774893155907281	0.938234290640903	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.990919527803163
Merged-chr13-104094963-3	7.20460817749939	0	1.36548489955023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129234614-1	6.1969178406327	-0.197292365176796	0.751774706093038	-0.26243549241251	0.792985712298117	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41617016553618	2.83089019616856
Merged-chr5-140616329-3	7.51987280966848	0	1.36999142060945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67597779-4	10.1532830288824	0	1.40301666531392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59253134-4	15.9172884172994	-1.63935714530686	0.739880617550158	-2.21570494809688	0.0267117158082312	0.393075841802826	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50780164191679	1.2636608194585
Merged-chr8-26435581-4	5.60497053657027	0	1.37310686464387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9987536-5	20.646837070154	-0.733226243294277	0.64399504885988	-1.13855882058778	0.254887212211129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42326374714895	2.1483714842969
Merged-chr17-57342505-5	15.4146568924053	0	1.3379456778924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118423553-1	4.18035547290254	0	1.41748439657311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111604234-4	9.40378289893072	3.27619165649164	1.0943346043322	2.99377506982053	0.00275549001699033	0.0795040774063575	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.9872420510626
Merged-chr1-191259305-4	11.8737320414873	0.554258253979479	0.806490992286229	0.687246676380447	0.491927295128005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.67735121185591
Merged-chr6-5292983-1	4.80306892194168	1.28675684359969	0.772073391296209	1.66662503604663	0.0955889874229098	0.884596827940407	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	3.11744344062656
Merged-chr4-46531028-2	3.82815169367703	0	1.41476605373843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122994706-5	17.1253486758414	-1.20556902571351	0.651393443162904	-1.85075400799208	0.0642049503800571	0.695152735097229	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52835950398345	3.26971859983895
Merged-chr2-129314115-8	19.4413470433808	0.0623967759655096	0.376147017476204	0.165884010949141	0.868248230570591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39310335761965	4.35939592033037
Merged-chr17-26462751-4	6.56530343153388	0	1.37978258753788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4247487-4	6.85388489684869	0	1.35088900500113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66106175-6	29.3143078217369	-1.04944640796146	0.513595532732643	-2.04333243005009	0.0410195413636964	0.516153066895641	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75564801713187	2.16316624203518
Merged-chr12-117736186-3	7.52284958781359	0	1.35655443405191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152430054-2	3.81056715194883	0	1.41238905893647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99199247-4	9.17186045917984	0	1.37126386480891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-23594804-4	7.62373435130909	0	1.36177668304549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-17520250-3	7.32226199121895	0	1.382368731892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134624274-2	5.5390590493769	0	1.40215243598451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85420997-4	8.97682075155923	0	1.3587005234203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73571282-2	4.69013646158483	0	1.38460910697277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-195040627-4	4.89607640328245	0	1.37483576786906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101974660-4	7.46982448264443	0	1.37006985650173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111086315-3	5.73398573113987	0	1.36882603318403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100210955-3	8.35358409453513	0	1.35803933965997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117962141-4	11.2556738908699	0	1.35048829216418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147058816-4	9.08653311193635	-0.983083284572579	1.007919118991	-0.975359298230912	0.329382065800419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.724326877898254
Merged-chr2-83625837-4	6.60803686924713	0	1.34668453840043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86110293-7	28.816835953194	-0.0952721668928243	0.381950584619108	-0.249435845183566	0.803023660739644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11281138698766	4.18047768115669
Merged-chr8-13156073-1	1.85208495179646	0	1.61471270979754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87336897-2	3.90794494856632	0	1.41104356068855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54981152-2	4.52591469637739	0	1.36342153724934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125551507-1	6.16912360464863	2.52544528812713	0.941275039646899	2.68300462856691	0.00729639804978834	0.161098660271505	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.01290796917211
Merged-chr11-68030845-3	7.41382056331398	0	1.43240130630076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123986316-4	8.20309174495797	0	1.35296492767871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87848806-1	2.25059937341429	0	1.48588150172113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54639858-1	3.11419562248538	0	1.38296064126826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84845854-1	1.57190725586337	0	1.52790501218667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73527409-4	11.3687739415868	0	1.34621400552979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41972967-1	1.42609341779206	0	1.48987057006916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73742069-1	3.11497720018831	0	1.42638365977641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44794592-1	2.71587510190388	0	1.44663998902993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113614796-4	13.2998350973962	0	1.35617293728076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-69702712-4	7.97395218793793	0	1.35242576978535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69669338-2	4.93709338561954	1.10980717147446	1.01914034475018	1.08896402462263	0.276169750479146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.25243428981845
Merged-chr2-28796537-3	5.36149259992166	0	1.3585742609836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34716690-1	2.01457470011456	0	1.46260745725599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40928785-1	2.34488187239118	0	1.47115538744908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87151659-4	6.53612649958839	0	1.36144862897132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24405498-1	1.40591994165194	0	1.61213854328941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3420696-3	6.60662624869686	0	1.36383131207314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140508071-1	2.05854515997561	0	1.48524380487813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15754012-2	4.4299035988633	0	1.40814701976766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48619241-3	3.9564037532637	0	1.43381039707712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132870253-4	8.02287179139962	0	1.36328515768597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102930833-4	9.23285198292568	0	1.36006571413657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48750051-4	13.4797238529243	0	1.34046840933544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51328712-2	5.39861558388349	0	1.36032696584237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-52094698-2	9.50162194323886	0.0613933611417618	0.534963420746276	0.114761792602787	0.908633933994327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47364774258589	3.73646302698098
Merged-chr4-130878690-4	6.02498948680476	0	1.35360612486044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54917748-3	4.9916207445547	0	1.36921253181909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82570880-3	6.72785533570642	0	1.35742559190459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91345294-1	6.36352769388166	1.52069071841193	0.88267325975868	1.72282404796956	0.0849203486045366	0.822556170668924	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19664257419518	1.91684356935673
Merged-chr8-127781216-4	6.54343576908809	0	1.41552570482894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3166650-4	14.9418709124855	0	1.38069793095765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67405815-7	34.9216401388841	-1.50837896365076	0.370321776687511	-4.07315761212601	4.6380014699542e-05	0.00310871913569964	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04242668086828	3.59384310510181
Merged-chr19-11055854-2	5.98722285177738	0	1.41273330092982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81389571-3	7.78977335812111	0	1.3582997357224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58552887-4	8.87962688462279	0	1.37366609566433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73084520-1	3.10387295609141	0	1.43596653757261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-91975588-2	8.86434007770375	2.62689681009222	0.821671571574926	3.19701557284884	0.00138857429725608	0.046561689820475	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	3.66829181023436
Merged-chr11-54563004-4	5.78450403371505	0	1.37563027111571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52424659-4	5.47576396499043	0	1.37034068060685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40580490-3	5.94718086688417	0	1.41690199281532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132096028-3	6.02344328105958	0	1.37868097427193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103549700-4	5.61255618692813	0	1.35588774213379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62880478-6	15.5544434844624	2.25194437363851	0.612516069781019	3.67654741604348	0.000236411929063352	0.0119323268820378	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96275318189595	4.10314875919943
Merged-chr12-85526268-3	6.04008490206728	0	1.35909905596693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64821032-4	6.82796357927242	0	1.38040709829475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88701831-2	7.11040983506478	0	1.37131989475835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100624992-5	12.5458274290806	0.46726063372446	0.726190967879942	0.643440437008727	0.519938351983481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	2.11005512232597
Merged-chr17-88403564-3	8.0599661217016	-0.205036190354697	0.847674700756549	-0.24188074761663	0.808872568423717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7913447488181	1.25163494309627
Merged-chr9-32725263-8	29.0582884432795	0.140259455607901	0.434591434163227	0.322738656545222	0.746893173720892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53328327800559	4.81731955238389
Merged-chr3-149460916-3	5.25472134926585	0	1.41020350976213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38343590-3	4.74761650053303	0	1.39233861413186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21419417-5	18.7098310902402	2.14972122852485	0.683978536040557	3.14296591961677	0.00167245311072077	0.0539222293272066	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57597341069752	3.5954240937534
Merged-chr11-109413286-4	8.24365870797123	0	1.39694055086715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120905617-3	9.29369274747224	0	1.36201284394484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144699768-4	5.8700784721141	0	1.36483754428213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113322239-3	5.39305177010977	0	1.39672198860567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139214739-4	17.178628151645	0.79620524135246	0.47825522806662	1.66481241526867	0.0959501862139307	0.887033362653582	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31883733653069	4.10308753517218
Merged-chr7-80784417-3	7.20745914550736	-0.110231082982133	1.0612366038163	-0.103870411730741	0.917272188084403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	1.06702908365212
Merged-chr3-65397396-3	9.00100649534692	0	1.3627985210726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-90797863-6	18.8655247768871	-1.84257053038247	0.580272062227144	-3.17535626876554	0.00149652639133394	0.0493327338426449	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0171029178545	2.31445505375209
Merged-chr14-70303071-3	6.24459060827084	0	1.39428276060566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-94052960-4	9.57161465071159	-1.66848205774082	1.1481222875614	-1.45322678238801	0.146160798368002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6995072319729	0.465515277017237
Merged-chr7-83649050-3	6.23281872148451	0	1.3796057533937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25389360-5	16.473917666547	0.679470296073283	1.0203203087326	0.665938225729618	0.505450586084916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.27992882773773
Merged-chr3-69241334-2	6.24250050702157	-0.0645098325429189	1.14385539558132	-0.056396842461135	0.955025672304877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.878778741524029
Merged-chr8-71637582-2	9.21023493302845	0.326978957606994	0.796162245187145	0.410693875002996	0.681297018726936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	1.6044622311735
Merged-chr2-91132263-3	7.63159048703996	0.823381601101834	1.17292523176951	0.701989844535664	0.482685496752081	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.990331813111976
Merged-chr4-141638356-5	14.5968411574631	1.17006751875543	0.611215211815174	1.91432984018933	0.055578023932149	0.634965490316874	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8134253095212	3.87732700719772
Merged-chr9-120028084-2	6.02244551155031	-0.0349682528486801	1.31659968109418	-0.0265595179391349	0.978811061864335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.600815099743027
Merged-chr10-19958344-4	6.51451660037516	0	1.38614850813748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25289381-4	6.95789499137273	0	1.36270277512268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103578989-6	15.4692664210262	0.583753731915804	0.597623405480751	0.97679195051976	0.328672161918109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49164944546238	3.20259243674241
Merged-chr7-73594641-4	6.06005198300216	0	1.35666967607139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4876771-8	28.2272824914484	0.119369043946377	0.37578930710483	0.317648857190813	0.750751309344978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75580760445739	4.92474086155447
Merged-chr11-100725614-3	5.98074391515046	0	1.3560928565167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62751267-3	5.88329005406496	0	1.35855984363263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117123345-5	12.7887166468325	-2.41096058177864	0.877730686178962	-2.74681131666287	0.00601777436520434	0.141060886898725	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6203855945659	0.724326877898254
Merged-chr5-99297765-4	5.67440862670029	0	1.36504510699159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51567704-7	13.1323225019973	0.700624091353305	0.801156163875	0.874516259058101	0.381837169689463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.2881631765938
Merged-chr2-167948132-1	2.97758567351831	0	1.38681004616639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88235480-4	11.8870216144286	1.81830683931173	0.672675867737868	2.70309509604751	0.00686970890806186	0.154170789102636	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	3.21579103785807
Merged-chr2-6646888-2	2.97489519263787	0	1.46184755158173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23874673-4	11.9151300291898	0.658050534972415	0.427837824466022	1.53808405274526	0.124028064668109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10869930021495	4.77658955448959
Merged-chr1-193649574-1	1.22519624084647	0	1.77032740428184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124928565-3	9.13665765044962	0	1.34514089787142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68709379-2	4.22071456754135	0	1.4417032881585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123798037-1	1.17701602034297	0	1.66134952801129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146630622-1	2.59714749909711	0	1.41660361442571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94987755-2	1.73491046024597	0	2.16200912265698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35874632-3	5.18235755281863	0	1.36311222443016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20873524-7	22.5872727023975	0.909136072434447	0.359868255701278	2.5263024955141	0.0115270181794259	0.2213342215526	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34648662140201	5.53945648750785
Merged-chr12-35039812-7	19.8324633025694	-1.38737827677821	0.419149426710059	-3.30998490840812	0.000933010015815983	0.034015755499491	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40472178296657	3.959178630143
Merged-chr4-150569417-3	14.6228006987637	0	1.34119096717147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125272207-3	5.01949906583855	0	1.3736474930404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102154973-3	7.83087781386019	-1.55322264229611	0.973075818946453	-1.59619899298061	0.110444372381054	0.967579029442647	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12456390572862	0.723581231604105
Merged-chr11-106657085-4	6.43339674024685	0	1.37225752564231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32409115-2	4.66369222995799	0	1.37865679358721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133729672-7	19.0674508832526	-0.00668055527537676	0.626305673974542	-0.0106666050667909	0.991489441884866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09173243208522	3.04480424179909
Merged-chr16-76192059-3	6.18784066029885	0	1.35758268595709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129612843-7	21.4320523223293	-1.31445977006785	0.52016471844486	-2.52700677969412	0.0115039281968379	0.221174095182005	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85862352439693	2.43631673959719
Merged-chr2-5393105-4	9.14007628916394	0	1.3772872093637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25881888-4	9.95870094157282	0	1.35249796606371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14188162-2	3.21299644777934	0	1.39300194263227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85190122-6	20.5278881258811	0.817942235382572	0.607065224783213	1.3473712576349	0.177860692764914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98531404180197	3.13199448137497
Merged-chr5-123058967-4	12.5196855382567	-1.66661765985454	0.625304668070824	-2.66528901022976	0.0076922183798932	0.167542425835445	C57BL6J_F1_Control-BALBCJ_F1_Control	3.775126420381	2.22672895781331
Merged-chr13-23730619-6	20.0788981141503	4.00600592552632	0.835349475102797	4.7956047677331	1.6218477642877e-06	0.000190690177176759	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	4.37863459358447
Merged-chr8-83201153-6	26.7139060669623	1.40134430826984	0.347426170639883	4.03350244366702	5.49516089962616e-05	0.00358841479223029	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99512545696385	5.63175290319998
Merged-chr8-126779592-2	5.22669074716559	0.623112955052956	1.38061124488799	0.45133121822683	0.651750848181665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr19-53403974-3	6.02697714375337	0	1.37567954517071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52011508-3	5.4698129178729	0	1.3903966879133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144240651-1	3.04644722576773	0	1.42054520060321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54722139-6	29.024534098819	-2.72188115730569	0.43322687018053	-6.28280779576637	3.32512062012579e-10	1.0328584673681e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	6.18834398277778	2.72420401248126
Merged-chr13-8644968-4	7.20686710358554	0	1.35811520776785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51919621-2	10.2549190074465	-0.187840149491201	0.605711430502708	-0.310114916166108	0.756473569602814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63735264930219	2.87319667238976
Merged-chr2-150838133-4	7.13965815252175	0	1.36607092533051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125376139-4	8.51755519358705	-0.388017938955197	0.728026375424106	-0.532972364811866	0.594052710376276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74280221675353	2.54659443041619
Merged-chr5-109796522-6	23.2059637461976	-0.136704861406808	0.511881138348529	-0.267063681713017	0.78942013007389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19595557655358	2.73360067342748
Merged-chr9-48423441-2	6.37693526410084	0.0828268425861421	0.805010552995331	0.102889138878932	0.918050957869487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03169262342392	1.65345633230702
Merged-chr7-53433585-4	7.84897906296095	0	1.36136475264734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83555185-6	14.8190889168051	0.591261304334943	0.458645381010342	1.28914697240047	0.197346996095747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67270221175047	4.31679973005318
Merged-chr17-87550755-4	14.4123954297518	0	1.39377409629009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65607693-4	6.60958085280364	0	1.35800172607086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-89607644-3	7.55467390780522	0	1.38171186545169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45882479-1	3.23324045679242	0	1.40244892511487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101740165-4	11.4367333906166	0	1.34192620135068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8595549-4	19.7896699990963	-0.908168277673299	0.382625331863127	-2.373518431859	0.0176195136213483	0.295519636205762	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00742356755174	4.0880685556384
Merged-chr7-68667875-4	7.34414555861218	0	1.35686117857442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68264100-5	14.4912558705967	0.0632500263476631	0.607617602449061	0.104095118529693	0.91709386466328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97407124760784	3.09103936515447
Merged-chr9-86583889-6	14.7609582747822	-0.281325682252938	0.504284695427698	-0.55787075198532	0.576932644951674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23542210307899	2.85856882504188
Merged-chr7-19472650-4	16.2525817614887	1.08660168685324	0.546624251688088	1.98784024583175	0.0468293610921725	0.564805623499989	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41016391054307	3.86907919514906
Merged-chr9-114788057-9	34.4394207446056	0.67537460506466	0.396853721574323	1.70182253144922	0.0887886414279448	0.844377494643396	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35284904128349	5.22786235372175
Merged-chr11-113339983-1	3.49285728248819	0	1.39254053290262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41468477-4	8.13489343156543	0	1.3612389099232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63129882-1	5.27775383688448	0	1.37207954188273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57820646-4	6.72801623112484	0	1.35767310070692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-68969258-1	2.68932024057571	0	1.4121130728209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14846873-2	6.03823764201943	0	1.39953514978752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55832217-2	4.44920318143193	0	1.38441719170744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74673800-2	5.39744027618718	0	1.42092891122844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115506749-2	5.13228589963407	0	1.39474008838957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84387499-7	26.6487901477532	1.19872992356944	0.432043980531797	2.77455531747934	0.00552772324575484	0.133133144845364	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57646640264799	6.09431370714197
Merged-chr11-54972559-4	8.00974508632247	0	1.37385945886433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41603476-4	7.79463053154642	0	1.36458361629835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25261189-4	7.70059692182589	0	1.37435247183241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135630072-4	8.37780631054294	0	1.36558945479607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70679979-3	6.16265838097448	0	1.39109823871052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126440822-4	6.00854953864925	0	1.36311711518858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87993005-4	7.16801736272411	0	1.35363837811038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9503150-6	21.9502297852478	-0.114810790550412	0.439078606050421	-0.261481176646597	0.793721463584643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37840423555108	4.27498023029385
Merged-chr1-171658585-11	49.9875358522729	-0.883572988287756	0.305007680217357	-2.8968876706911	0.00376884674029343	0.100723077657626	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2265403934018	4.28166068496472
Merged-chr11-20133148-10	41.3127896123103	0.230515390186934	0.317510080694353	0.726009674032482	0.467832840030147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.34061579336028	5.64311580031867
Merged-chr3-121891738-1	1.6262499707056	0	1.63119600995213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6086595-1	2.23806522791059	0	1.49730313075263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76532944-4	8.47778120219241	0	1.34816069237278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117233418-2	4.83659539992483	0	1.38474320225347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151071087-1	2.29945089422989	0	1.40911944613011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68319091-3	5.00793220335715	0	1.4305635648289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31087753-1	2.72937703181126	0	1.43981731585387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49252602-3	4.38868163851151	0	1.38642459909313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-87422524-2	3.06404952690313	-1.28107256247313	1.37974325651761	-0.928486192211209	0.353155426952354	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr2-163100693-2	3.88652888399227	0	1.39738561764866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118095814-3	10.6614157268944	0.592434343730712	0.805117660520182	0.735835732814436	0.461830672311203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57403368136583	1.67279875369265
Merged-chr12-103544313-1	2.22886632816012	0	1.49368531702286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184534272-4	6.99859368159083	0	1.36230364657774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34642618-2	3.38288938318157	0	1.45959359631341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105693972-1	4.54038577315554	-0.619099264474627	0.796509667540265	-0.777265223140974	0.43700230841781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75541628522075	2.75363610327158
Merged-chr10-44029736-1	2.11018129073765	0	1.47822946981305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135002231-1	4.28163733735788	-1.03643397089228	0.920380418935444	-1.12609302585019	0.260126145718773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8746476554	2.18893016279325
Merged-chr6-37161067-1	2.57357763627332	0	1.46816181315865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125106406-3	6.65755516129459	0	1.35725409683226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61452686-2	3.99961790004349	0	1.40246366611697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103648709-1	5.39326830348737	2.20665804937749	1.06852230981458	2.06514925248534	0.0389088804465752	0.498620452159046	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.01091647595868
Merged-chr13-9428107-1	2.67201105133919	0	1.39265406090808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102828518-3	9.05181233888236	-2.79544185916849	1.17459502361065	-2.37991971954336	0.0173164101454427	0.292490605302428	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0
Merged-chr6-87038333-9	28.9922923382373	0.130677662540098	0.373710290484728	0.349676382661554	0.726581579964119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12055183409164	5.1610563934306
Merged-chr9-116156718-7	38.859306976004	-1.19261001070793	0.273298382250236	-4.36376535012181	1.27842703550534e-05	0.00107909961526451	C57BL6J_F1_Control-BALBCJ_F1_Control	6.29247589309506	5.19578709716936
Merged-chr4-132336054-3	7.20764333196277	0	1.36662678650281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37776938-3	6.77159774052864	0	1.36322874937375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24467862-4	7.66333820891556	0	1.36163469246255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86587107-4	5.1138212694214	0	1.39134795365984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44428132-3	5.54997539506028	0	1.37769980466758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57094384-4	10.6427040020405	1.477368699047	0.812825458170358	1.81757188360279	0.0691295922322994	0.726569122999916	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	2.89624556980829
Merged-chr15-38458454-3	4.32894721680241	0	1.37412597548505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93332550-4	13.0877514196182	-0.0664250216539423	1.00527669206228	-0.0660763570651122	0.947317034034377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.02186287315087
Merged-chr19-9954260-2	7.33300243811385	0.926240415368857	1.06211901969042	0.872068382354016	0.383171073510598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.948471875794396
Merged-chr12-102694998-4	6.79711113545513	0	1.35656266304308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115216997-7	22.9935055223685	-0.158762931515141	0.30165510146796	-0.526306138177491	0.598675518893976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27217740187685	5.04637786768509
Merged-chr14-120323293-4	11.2190648793962	0	1.36228508301585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125144404-4	7.41116081932635	-1.71468743521691	1.06215849275581	-1.61434234806906	0.106453189312675	0.948948658223629	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9094343094868	0.55634759613363
Merged-chr17-5589126-3	5.64647013890067	0	1.36278929483241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144309510-3	4.84980887538706	0	1.37412893508901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57836879-3	5.89852896595675	0	1.37622703920925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40491572-6	13.896266891931	-1.91311516493763	0.516318805422204	-3.70529824760739	0.00021114213820869	0.0108997867909651	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50118416102536	2.73199680147298
Merged-chr4-137968371-5	26.9981361398741	-0.489804190470318	0.476068290878529	-1.0288527924564	0.303548854555272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51739806237955	5.17389332509322
Merged-chr16-38475765-5	12.3196314393623	0	1.35177520154911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41245300-3	8.90018758582141	0.927956609566062	0.800848077942733	1.15871740861245	0.246571392435354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	1.68580115571326
Merged-chr2-71663595-1	4.2822418131851	0	1.42063752102112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-6005890-1	3.67467408383247	0	1.38323752006155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123202004-1	5.18847925188032	0.789099730961514	1.27950639409333	0.616721991077408	0.537418113535238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.662147012823607
Merged-chr7-145025635-3	4.34590446502246	0	1.38790614687104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31090053-3	7.21237834211638	0	1.36148583943998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43420531-3	7.8251083435739	0	1.39916662385051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103241830-3	8.89511500921516	0	1.37842983180705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46106045-3	8.20645381278073	0	1.3539947712212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27668007-2	4.74613222645655	0	1.37568353873799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165682193-2	4.69815153380136	0	1.37221270852969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74981595-4	5.33262470941189	0	1.36592619747632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67537570-4	5.97345277107781	-0.0350077501857509	1.14874448673969	-0.0304747927758141	0.975688396492427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr14-54449167-4	8.17807093182242	0	1.35107258999611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44087818-4	7.25487382504057	0	1.35497522717501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34741970-2	3.71743279003196	0	1.38747561507373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84885371-4	8.57912379579652	-1.35563140410703	1.06690877714986	-1.27061603872869	0.203865278256592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	0.841757702988201
Merged-chr6-49012391-4	6.48350642217441	0	1.4069847177798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43715505-4	5.92485058094313	0	1.35367696233951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45666360-3	11.139040893753	1.02586245259993	0.674620968670029	1.52065011353317	0.128347663790778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37475311282297	3.01431470113562
Merged-chr9-64087708-3	8.48894439350959	0	1.36617984050048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81039938-4	10.404395519552	0.354100377750654	0.748929066074604	0.472808966550886	0.636349476387339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	1.97033474894526
Merged-chr13-5424599-2	6.28441140531434	0	1.37574396543654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39010186-1	3.47388906676193	0	1.40409286788653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66332389-3	6.1257837654054	0	1.36972564886412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125630522-2	3.84774849873769	1.8310138437252	1.38103299056838	1.32582918455237	0.184896283721294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr5-135614813-4	7.50021097541489	0	1.35292098833457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91723228-4	11.628642122592	-0.324461391447647	0.499491385513087	-0.649583558111526	0.515961256453229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56796468413454	3.46494681590549
Merged-chr16-33535117-1	2.24751361368986	0	1.47024110361499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119370058-4	16.2394292364078	0	1.34009249398399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-70957100-2	4.78361567824033	-3.54475409733221	1.15580062320345	-3.0669252344816	0.00216272944833665	0.0661585875532538	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7464719987851	0
Merged-chrX-57282413-2	4.29898160672646	0	1.40435873175588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67892904-2	6.15138936450102	-2.0299448048603	1.39886827958069	-1.45113363030061	0.146742653532505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr13-113920158-2	5.41345569939275	0	1.45487260587894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58860868-2	3.45069212557204	0	1.51699036514999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126919426-3	6.9246722485201	0	1.38487785041853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53995713-8	21.5474136133108	-0.114531628385414	0.366714571911149	-0.312318181926963	0.754798723485311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72362481942329	4.56351464151406
Merged-chr16-96345296-5	11.138871698449	4.36207160920651	1.03902579485619	4.19823225833412	2.6900665679987e-05	0.00198893927038328	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.02686032613259
Merged-chr18-9732225-8	28.5413594293814	-0.0500948718110207	0.542379706177471	-0.0923612576954147	0.926411019693519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65419093112727	2.57947678043309
Merged-chr17-70974374-3	11.9528184500404	0	1.36416901994422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-93988725-5	11.0989435216529	-0.26600631745281	0.584909824990229	-0.454781756242944	0.64926625651111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07680635199509	2.77037810815604
Merged-chr1-84582008-3	6.47217772222644	0	1.3655543052991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152808438-2	7.32642178991199	0	1.37590072429838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38029408-3	13.2654999825389	-1.00016285298922	0.486799886303714	-2.054566734975	0.0399208714194912	0.506904613289447	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05915894960313	3.92414527566606
Merged-chr9-118762232-2	5.19555474715299	0	1.38248255620773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113479421-2	4.05505980764045	0	1.38143837420023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89834630-4	12.4283748882646	3.72735398299082	0.760100479375796	4.90376481021532	9.40170500208375e-07	0.000121105991044614	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38860239282551	5.25238817478517
Merged-chr19-53449383-6	16.5431317524017	-1.00061574359482	0.492526987443896	-2.03159576856446	0.0421945954283846	0.526067892865036	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74929055207468	3.32767404185774
Merged-chr8-83081904-7	20.8633787610951	1.16032659348398	0.53628683688408	2.16363056797307	0.0304927135854125	0.427844541857941	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57387282706098	4.10217757491784
Merged-chr10-60933643-4	7.04849665272321	0	1.36175208195424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41349816-2	4.50358976013242	0	1.39296378468307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41918618-2	5.60523855958019	0	1.43863524626414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-36862529-2	4.07281623996367	0	1.37306769543634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4313420-3	7.37268138865165	0	1.35956691684866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134218056-3	6.05988634973417	0	1.46016059622764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-33667329-1	4.06798859046106	-2.59030610660828	1.27854364134848	-2.0259817677215	0.0427666530443299	0.529746129382951	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	0
Merged-chr16-21389289-2	4.09251623347953	0	1.42424529136407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140767077-3	5.19436323099811	0	1.3634300074002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46180839-6	24.9604677371835	-0.238384046393176	0.455763882040804	-0.523042864488841	0.600944424379166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61587672272493	3.48177601887983
Merged-chr10-121483792-3	4.61410889585565	0	1.39327659520728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19276282-3	3.87737838549113	0	1.41167779735648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4847244-3	5.63696063165571	0	1.39447652415818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123620978-3	7.50345129801578	0	1.36189385554525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120630178-4	8.09934990933721	0	1.35108264325404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16989772-1	2.25615488310343	0	1.4920651357884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72835799-1	5.36662229943514	1.83480682969855	0.99584506275738	1.84246214427994	0.0654075789261266	0.703639537471862	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	2.55502859194081
Merged-chr8-68196191-8	26.9936113566429	-0.524898646604401	0.419332946116349	-1.2517467360143	0.210662164277829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90229496219891	4.72611505233382
Merged-chr1-58669877-2	4.37385211845905	0	1.39756784742643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100683008-4	10.8194257126722	0	1.3538086934084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95354314-3	5.75714847101846	0	1.36467660731796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108650726-4	8.1701586422209	0	1.3520198922145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72965461-4	6.38415492757876	0	1.36979807890346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126610035-4	13.8048289083187	-0.129187625803538	0.686242451459299	-0.188253620172899	0.850677840987996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20458646825563	2.24986710229783
Merged-chr1-107503501-3	8.51385107555511	0	1.35635194331802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115661296-4	10.9094599013407	-0.471105335824861	0.803122694495282	-0.586591985326632	0.557477766702431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92063322615843	1.42191336705548
Merged-chr16-49909737-2	5.48139698666205	0	1.3834197474036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105145943-8	23.5820236263332	0.144155430458734	0.371248917510675	0.388298587980634	0.697795082076967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22732265919336	4.34317918013711
Merged-chr9-59598773-3	8.32447110138476	0	1.36886372416505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150898914-3	6.34196667727598	0	1.36091864973312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78609023-8	20.518340949369	-0.0672063454362793	0.418642370538764	-0.160534026572106	0.872460419866654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79988838083183	4.72790726778973
Merged-chr13-34684015-3	5.5560571778498	0	1.38896315017673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23124606-4	8.59777147884939	0	1.37203275441424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65679156-4	14.2169130070289	0.321970184975026	0.572766195786468	0.562131961249786	0.574026113720955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44984116557272	3.3478129876819
Merged-chr12-119207405-6	11.7297472045228	0	1.34599548854609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78702567-6	26.2840644239196	-1.61901306763183	0.456446424016832	-3.5469947455917	0.000389652362588455	0.0177992544352486	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64485884352751	2.54186430548831
Merged-chr10-88622740-4	23.2478488741247	-0.935347543733151	0.392117505386148	-2.38537563583662	0.0170616900372368	0.290102098446718	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64961261172176	3.72667669938359
Merged-chr2-117169278-4	5.15756251474387	0	1.37133359033492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115676921-2	4.62352158959272	0	1.40546854671347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61204116-4	14.0560713118739	0	1.37932194951464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45494205-1	2.71855795996535	0	1.4021631882083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100711109-1	6.19105056064052	-1.67042185731962	0.763738727195837	-2.18716401020122	0.0287305531591737	0.412074970759769	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95390865298081	1.45526469271556
Merged-chr9-121599656-1	3.4700625279135	-0.129759327177262	1.24578116460556	-0.104159005501055	0.917043165831212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.25560888218618
Merged-chr7-123082419-3	8.87131761047919	0	1.39111702256029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55517261-1	2.80549519448909	0	1.41097463697876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77483164-1	1.55249956437469	0	1.55659873225015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45523171-3	3.56753400364105	0	1.40365730084156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25496320-1	1.45830153834522	0	1.82104997845299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28720912-1	3.93300495614246	0	1.37344195176095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89866640-1	2.12654487379832	0	1.54322313101882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141373944-2	4.03955698252802	0	1.44179893097925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112084627-4	7.12350815875838	0	1.36381697954935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37622734-4	10.8045898031028	0	1.36349311852001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47634928-6	16.9744632544238	1.1504187080981	0.363652080586493	3.16351471506151	0.00155876471528671	0.050949364639252	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99189002990826	5.09052985506847
Merged-chr10-63223273-2	3.39629705408887	0	1.41237558228978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82781066-4	8.84430384698236	0	1.35431579722696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118883402-9	29.8645621478851	0.325280952893497	0.325221849897359	1.0001817313202	0.317222568535874	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68576419204952	4.98390288168651
Merged-chr2-58801331-4	7.41726181099563	0	1.36824010217574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134507517-4	5.90587255773811	0	1.3590246658099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167926862-4	8.38084489708667	0	1.37692016098646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3760448-4	9.8347196079323	0	1.36258369571905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102924709-2	5.66088553425546	-2.0237231559292	0.859455282516186	-2.35465788284464	0.0185397659644093	0.304656329522167	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70085612784947	1.27336184263348
Merged-chr13-99334244-4	11.4719891683776	-0.324129338355957	0.961689354582893	-0.33704162036455	0.736085525250028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	1.02748994520012
Merged-chr5-103927617-3	6.61055713363502	0	1.36374195467055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145023147-2	8.50589318792903	1.68693111252042	0.812505488313169	2.07620888324414	0.0378746360462201	0.490664285232716	C57BL6J_F1_Control-BALBCJ_F1_Control	1.162043158134	4.18532423144945
Merged-chr19-46511212-10	74.0802555255593	-0.112538777784747	0.366989428134598	-0.306654004603839	0.759106742963122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73996234780265	4.60462464271444
Merged-chr8-123026079-3	9.68463761073572	0	1.34687920645916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55019605-7	27.1052905452566	0.612246402554961	0.304722745836401	2.00919166987181	0.0445168107998082	0.546003907551167	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96206503899834	5.62053989714737
Merged-chr13-69528661-6	12.8808270306457	-2.04103968468256	1.04968465447374	-1.94443128799081	0.0518434639016826	0.604625371000121	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	0.55634759613363
Merged-chr9-63916126-1	3.32671647600912	0	1.37160180507469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104764093-1	2.34010479506445	0	1.42718852888729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48525572-1	3.21330181001214	0	1.46521169291348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6209748-4	10.6220162715402	0	1.35019039734517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103389922-5	15.513124401354	0.458533398331597	0.525970061153058	0.871786119016692	0.383325068572575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76252157376252	3.62926582552235
Merged-chr4-58581419-4	10.8174227412005	-0.130488506876281	0.625669887103313	-0.208558074419098	0.834793242542206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30483543417642	3.22275483765189
Merged-chr5-90601715-2	9.94034940464473	-1.30699417964192	0.495691412583829	-2.6367093446891	0.00837145272763661	0.17844434624901	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81396986371403	3.66888817258943
Merged-chr4-47278579-4	7.10512324549832	0	1.37995004276576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9647437-12	44.6977434308227	-0.0712581239491759	0.27959172776455	-0.254864922216811	0.798827429773605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33971842698292	5.27840652430481
Merged-chr10-8834038-6	15.9192549528836	0.242043360666726	0.424573398350058	0.570086024247715	0.568619353695305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7882466979231	3.98591241109659
Merged-chr12-70494985-2	3.57970351350553	0	1.41404038049432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51278668-8	28.4645331410777	-0.375161521533424	0.329705668337706	-1.13786797607968	0.255175615138906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51435024073547	5.15326389375292
Merged-chr4-138210150-2	6.76768578256152	0.0998789820982569	0.803804294516558	0.12425783586828	0.901111130606943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13923004754663	1.73795749839718
Merged-chr14-70800591-5	12.8500767562442	-0.953064751799728	0.598483262628766	-1.59246684295482	0.111279847507365	0.971112735696393	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60228562605818	3.73764376195009
Merged-chr5-29574465-2	4.43746400163064	0	1.38912186849723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49819788-3	5.12030945461545	0	1.38930990588079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58563778-4	11.7297697047854	-0.288553961486542	0.534190844086694	-0.540170174537309	0.589079679336381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27028269168757	2.8598212653742
Merged-chr4-89124053-3	5.39202694268693	0	1.46696678460997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153784838-3	7.55985881442413	0	1.35646054252476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-162652617-1	3.07773087771692	-2.76467258964192	1.22815496958903	-2.25107796499578	0.0243805997728827	0.368242573785533	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0
Merged-chr5-92485068-3	4.92065135250404	0	1.39221305236778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73591498-4	7.92197682252992	0	1.35269462264822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37146230-4	5.5390203760507	0	1.36500350342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-130311836-2	6.49423572212997	0	1.35654850503459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107626910-6	23.1727059298261	0.25979419864387	0.425287916244051	0.610866635803467	0.541287874354531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56053296477528	4.80306092048229
Merged-chr19-21897544-10	50.9814326666847	0.65841638945302	0.33878094964626	1.9434870530368	0.0519573381949577	0.605304103501866	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53222213120823	5.33902583862327
Merged-chr14-25646263-8	30.2983787645597	0.336909820774657	0.40721428637401	0.827352654482312	0.408037207484761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07449107677057	4.39163976476434
Merged-chr4-136506042-5	13.3528446258373	-1.2450242610649	0.644228786004203	-1.93258092173605	0.0532878445307867	0.616182501776012	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12567676862636	1.25171540477662
Merged-chr1-172455548-5	12.6218361584978	2.69107182944955	1.14621514630399	2.34778945133207	0.0188851932747674	0.308653103193951	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.44790810950236
Merged-chr18-39442501-4	9.63548448595449	0	1.39193110255514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117343987-3	4.39585308229698	0	1.38553526030185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5751938-4	6.34861670740859	0	1.35994542043332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49552948-4	7.14238458342736	0	1.36288442301706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55154698-4	12.051493336388	0	1.34659741703892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5382611-2	4.1553249857898	0	1.38930175916104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148899574-2	2.54415618399021	0	1.44634044956729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118871341-4	12.5805720812449	0.443120167178563	0.529941862386685	0.836167509362054	0.403060673879298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05201757098006	4.38536619009638
Merged-chr19-3379267-2	6.77617965683917	0	1.36225260141545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23889803-2	3.23333510779186	0	1.49843754634247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67108267-5	26.9597257452429	-0.77291191432008	0.559457474189834	-1.38153827587942	0.167113517504227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39904314295633	3.21783689603332
Merged-chr3-65510204-2	3.26636552072066	0	1.63530781238728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13506560-4	12.967364648229	0	1.36582326932874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159555081-3	4.78736571786033	0	1.37454920283458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113691189-2	4.10779020898679	1.80865045375121	1.12056804938162	1.61404785255952	0.106517047161278	0.949041882810952	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.725180588233
Merged-chr3-152105571-4	8.83040089923248	0	1.35806330844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55567420-8	21.0552998715736	-0.55241727122741	0.445013499157885	-1.24134946978635	0.214476677133112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19777134616639	3.83867297572425
Merged-chr10-84390917-1	2.44642813194638	0	1.3945698233981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144584936-2	5.05851299402191	0	1.39682757415225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51418756-4	7.29741762570207	0	1.35392650566283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126624366-2	5.60613312647257	0.73033441439138	0.846806905007843	0.862456848275955	0.388436169173909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09311265642062	3.18734724060675
Merged-chr3-65930623-7	21.962997968325	0.547433531950626	0.40513000736035	1.35125397281101	0.176614090586852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76097956172694	4.34997529071483
Merged-chr10-51595363-4	8.25632474849124	0	1.35554020520706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92053228-3	5.84281528970712	0	1.369965789201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161077439-5	16.5107544985038	0.98919276311828	0.521358547637138	1.89733680899915	0.0577834998385277	0.651130445216112	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18454616723382	4.19497413127603
Merged-chrX-11665852-4	12.6443679861339	0	1.41286834358389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23053574-2	9.81559394845552	-0.171351591490621	0.643424801833538	-0.266311760134717	0.789999116763985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94210488929397	3.07216427450187
Merged-chr15-64186935-6	23.682918427312	-0.439175760276027	0.374771008833786	-1.17185094344052	0.241256905457038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52409376978967	5.09485454321771
Merged-chr8-53626332-4	10.7732903397682	0	1.36434714846495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30200520-4	5.43439245213805	0	1.3595637975145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57681934-4	15.5602472858721	-0.41460731147981	0.461008287243205	-0.899348933528138	0.368466830569795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96427913759488	3.07708482336566
Merged-chr4-105496360-6	13.6477242360807	0.871588123793863	0.581081991231139	1.49994000321233	0.133629944516421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52033376980431	4.55918835802145
Merged-chr3-27291166-4	9.09650101184227	0	1.36108751479414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34530244-3	9.71873781946286	0	1.36427696343422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27856395-7	14.1249855621201	0	1.36190816290622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62542818-3	8.87246557276467	0	1.36358813070274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69951296-3	5.67545624824188	0	1.42906376635589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11102062-3	7.83893302056865	0	1.35679027556517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46483798-3	12.7763642613697	0	1.35379280136395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21855482-3	9.06247373262377	0	1.37780423058942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-48063510-3	7.73726509736403	0	1.4179417533342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164520918-8	29.1906366316414	0.236201790039002	0.456082551947028	0.517892624987846	0.604533187912607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69823178714803	3.9397283264809
Merged-chr8-70626301-7	17.9076196666902	-0.716992913980206	0.51706454750324	-1.38666036463409	0.165545351949104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15880057145915	3.78616966429122
Merged-chr11-106134856-4	8.47960698183999	0	1.34836060613437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157014148-8	50.1795584866283	-0.657153745770116	0.330456263219406	-1.9886254821377	0.0467425565923418	0.56401301527261	C57BL6J_F1_Control-BALBCJ_F1_Control	6.06018719144988	5.23840691089278
Merged-chr10-19077066-2	10.8148300435331	1.56238780124779	0.693839596135243	2.25179970983271	0.0243349320401531	0.367757178418315	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	3.34483667036483
Merged-chr8-92858672-3	11.8713064010722	-1.60965620754916	0.581564620875184	-2.76780283698624	0.00564355859675312	0.134966212829258	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41329937577049	2.54635642558252
Merged-chr5-139470607-2	5.27926753911366	0	1.40362630113995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101417982-2	6.25346377900113	-2.19756986925121	1.02990230913094	-2.1337653579062	0.0328619929581689	0.449508071266508	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88893749265627	0.67591700901439
Merged-chr16-57223118-4	12.3001898298167	0	1.3446869494689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69871782-2	4.19843703907769	0	1.41898101655056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79161616-2	8.82387808738871	0	1.37199930161521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101472952-4	5.90232075909033	0	1.37447182956139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70970370-7	21.8590487602114	0.622278891419455	0.487764859755438	1.27577638891711	0.202034576292689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6363913622003	4.51822121005631
Merged-chr2-91508587-5	16.1071684560765	0.388813919873239	0.538914660392593	0.721475863339833	0.470616785736547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42905166322265	3.44013257373131
Merged-chr14-102898635-4	8.84111621522829	0	1.36117165571472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55437305-4	5.7382844626636	0	1.37500652452982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101364047-4	21.8796640934861	-0.0893533881861104	0.567355920345374	-0.157490888844021	0.874857987940169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94008262894992	5.04036783208066
Merged-chr10-51528109-4	8.47436756425388	0	1.35126917858205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76676578-1	3.72619349543116	0	1.39408774040327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101806369-3	6.59775085176433	0	1.36131286093811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-63841802-3	6.5944455658083	0	1.51114843219533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108466220-3	17.0068806994345	-0.674088242534813	0.644508015676109	-1.04589582462784	0.295609132327712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98729642696172	2.77016410582549
Merged-chr7-98543045-3	7.9044277263633	0	1.39784521560758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128610916-4	5.42433998437928	0	1.3646549866166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16978086-4	9.87321151103808	0	1.36830256077026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63875620-3	8.9699793735362	-2.59837927660058	0.730976826793142	-3.55466709936605	0.000378457939373952	0.017449190098752	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26045799108389	1.45451904642141
Merged-chr7-58676995-4	23.1419504675729	3.34064637512832	0.683894578779323	4.88473878692095	1.03566061561353e-06	0.000131536157486299	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19664257419518	4.48968167234801
Merged-chr9-65525885-5	13.9084502543263	0	1.37117771540639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70829814-3	6.4304575718436	0	1.36930842277872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67782204-5	10.9431608290009	0	1.34914776008278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4591846-4	6.1345444729378	0	1.36847778284668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93263638-5	17.8522852367377	-1.6383215268214	0.491676913941248	-3.33210992903598	0.000861902031945952	0.0320685369983231	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50104429839793	3.2450441858182
Merged-chr10-88409975-3	4.90553296378586	0	1.38362066178078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180858947-3	8.99185057196455	0	1.37461541317529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9943231-7	26.9904450245174	-0.242228391824677	0.510949761684887	-0.474074772098757	0.635446587959139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77812499375419	2.93124709432937
Merged-chr2-91081108-14	46.5858129309616	-0.177689247302351	0.338564575960851	-0.524831184119209	0.599700551287303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22694844860196	4.79101971347528
Merged-chr5-151686868-4	10.8257612796983	0	1.34587578772998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75535286-1	3.44360888567014	0	1.40398990676301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-96616024-3	5.38776505848328	0	1.38078147802351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116965448-2	3.29700684589025	0	1.45760199865093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17727313-1	2.38900718521923	0	1.46849081554746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73445342-2	3.90820000181536	0	1.38624737821369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36803381-4	9.2150914956825	0	1.35517623651465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99155476-1	1.88323780495498	0	1.51993826491814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94536517-2	7.99079033698797	0.164986530451358	0.67459138878207	0.244572541533965	0.806787427133375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39874278573185	3.47048759959349
Merged-chr11-69260931-4	4.95727167353979	0	1.39052174353397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80769796-4	4.10004860231327	0	1.40210677185058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35131776-2	5.53358090603877	0	1.39256947212345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108695504-1	3.43101274268933	0	1.4091823447694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19219557-1	1.84964260624145	0.612895607365478	1.4828898371877	0.413311624367078	0.679378314253864	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr2-167333627-1	2.66388374943968	0	1.43453401978791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-53067147-1	2.17077600464893	0	1.50098069714943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65001197-1	2.83082804684147	0	1.42826269524025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56593428-4	10.4843573911862	0	1.34480063660301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61629867-1	2.56982913249372	0	1.59808936441105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136249927-1	2.5767979812854	0	1.43430842441592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25524345-1	2.39054275158411	0	1.47429335378482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170576574-2	4.97142223664845	0	1.4116347018695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12376903-1	4.78543337859045	0	1.36497368704809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155582433-3	3.64042101252331	0	1.44540979878283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24505341-4	7.32508314975388	0	1.46027520176551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93888651-7	21.4826305568085	1.21442835825768	0.476872916836919	2.54664988381587	0.0108762493411877	0.212516907957448	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90870545105247	4.15330123129865
Merged-chr4-128670762-3	8.09054183604171	0	1.36502579797866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40616581-7	22.2957233173622	-0.44590571915121	0.366067328684583	-1.21809755804627	0.223186901752905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0885481651849	4.61156880682085
Merged-chr15-67101519-6	15.4654595575158	-0.0355371531506995	0.521554458026079	-0.0681369943326658	0.945676581554071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88646578373819	2.86071803770327
Merged-chr11-29647900-5	13.0317325286345	0.176327251994346	0.841701900177385	0.209488955599585	0.83406655627399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	1.36232305499238
Merged-chr4-145231922-4	16.7735585438021	0	1.35621675718386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73359731-2	4.83137055853938	0	1.40511534425189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76633920-4	15.1045659720482	2.42667543617762	0.697337222080872	3.47991668784919	0.000501569727548203	0.0214500450626394	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	3.94800104853229
Merged-chr19-4228480-4	5.90417700162929	0	1.37378837690813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32040466-4	8.88821985261998	0	1.36209198784772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55688755-8	20.75324492656	0.182811410308064	0.403744444585461	0.452789908962742	0.650700030634654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5785836285397	4.6341595967751
Merged-chr6-114782183-4	5.47135906963083	0	1.37097511068382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75150848-4	4.80140329727162	0	1.38173742869311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101444456-3	9.97618031581717	0.710810646746674	0.920565250883104	0.772145859367155	0.440028043430351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	1.97656658922368
Merged-chr19-21571342-4	6.48953390738655	0	1.35533423733282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12245142-4	7.78538994238084	0	1.34811503533986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14349526-2	4.6533666270851	0	1.39238300613206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34765097-2	5.08432536434845	0.0149322186411821	0.775369574393563	0.0192581952327199	0.984635133109487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71623706106846	2.58423540783922
Merged-chr14-103857143-2	3.84309335420735	0	1.40035372887493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101148786-1	5.35743228583026	-2.72620169323332	0.852056309648395	-3.19955578330063	0.00137639548549442	0.0462133923384751	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97763107365733	1.14143228603163
Merged-chr19-18620406-4	8.79375238096898	0	1.35472453014302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37605886-4	6.04497435827471	0	1.36291777084526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152594928-3	10.1210111795239	0	1.34391710881468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-69971646-7	19.2119290223497	-0.209959612345143	0.471235701057058	-0.445551158102345	0.655921498062617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76981640261366	3.00850529473697
Merged-chr6-115284346-4	11.9261650411636	0	1.36696251771627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75835752-4	7.03978237869652	0	1.38244213473757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64627347-8	28.8689350146469	-0.794240905719801	0.353293204425439	-2.24810694281957	0.0245693714781196	0.369655816268781	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2484871270869	4.35221585005415
Merged-chr9-95575814-4	7.55117359899928	0	1.37934714091598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33646976-9	34.1554582416676	0.194264440712923	0.333506381451989	0.582490925262518	0.560236052287952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99078733576743	5.18669059191608
Merged-chr7-123294047-3	5.06640918341254	0	1.42068638693198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134799492-4	6.09436271444102	0	1.35301357511941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56958099-3	6.89360064156694	0	1.37193129195938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153215616-3	6.85052977596568	0	1.35965287182278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3182964-3	14.9508806018806	0	1.35667761531056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33467303-3	3.99992767800266	0	1.41390066077673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93597924-2	5.72372931943222	0	1.38860562363953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103359254-4	5.88497635168013	0	1.35419766463094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-17024197-8	42.5990397298596	-0.137820922450532	0.431393253064511	-0.319478622976801	0.749363599122822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00230025009134	3.98654498164853
Merged-chr10-95510139-4	6.61562268631738	0	1.36114954913425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191643143-6	16.8710810902393	-0.318921232791739	0.617526202716832	-0.516449717256745	0.605540349342901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97448427177487	2.18539252283273
Merged-chr17-50124004-5	21.7008479501068	0.276746771297902	0.423007025581652	0.654236820103317	0.512959243168429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39341197019715	4.53727564757407
Merged-chr7-30842185-7	29.4214125650176	1.76689352218747	0.520595285941128	3.39398678763157	0.000688830158048064	0.0272916316044714	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76014702231799	5.16399929647036
Merged-chr13-111789673-6	17.0821875691831	0	1.34346199011699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24571079-4	8.34341857106529	0	1.36253026142469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43656678-4	8.11621861045269	0	1.35595828293562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176849058-5	8.22917785098345	-0.296043543821698	0.7869730349395	-0.376180034992503	0.70678305695936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06559681884521	1.54671377011021
Merged-chr13-19855039-9	29.5343476987913	-0.052944168208867	0.382711293734813	-0.138339706916391	0.889971945601627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12845257292184	4.0368731559293
Merged-chr11-23987942-2	7.96634196105324	-0.0388669979902599	0.638412824743929	-0.0608806660578125	0.951454247130597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21745867131732	3.18398413452348
Merged-chr18-60915902-4	5.3102271323774	1.77259620989734	1.28609903800839	1.37827349023005	0.168118864785568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr4-139205134-3	8.40736581946653	0.90532961634667	0.661490716276137	1.36862029061152	0.171117998051119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9001726754443	2.95933864316373
Merged-chr7-144990812-3	16.8406844164909	0.719188950150902	0.590700766462239	1.21751822747444	0.223407105639123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73723010167577	4.29812179335561
Merged-chr9-56463995-4	8.83641749319131	0	1.35625478031085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34486136-4	6.65376024708524	0	1.35488273953733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79618315-4	12.8814746775344	-2.50670743965774	0.757226274769458	-3.31038095636727	0.000931690732690405	0.0339904540525622	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76551301165728	0.887876939341704
Merged-chr5-21213980-4	7.09698366017376	0	1.35627249910312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78447385-2	2.06955832805856	0	1.51872155524466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24436710-4	15.0813257239883	0	1.35381294339436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75155404-1	3.34711177506368	1.57720762150619	1.22830644434821	1.28405059565011	0.199124252780622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	2.02497645810754
Merged-chr3-107775883-2	5.7420088888304	0	1.54401922581465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95682537-2	3.96464895477936	0	1.39123789364418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80986213-2	4.54854499571063	0	1.39200287963093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25358779-4	8.29471138939533	0	1.37832149237183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121509361-8	20.9371974654815	0.586388237525855	0.399103485351533	1.46926363474215	0.141761296255473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26453686976288	4.99632978160982
Merged-chr3-22091936-4	4.93174258239965	0	1.36123082373837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34026909-4	5.37477308671758	0	1.35350652492779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62879674-5	10.5118052962697	0.0634733659969304	0.659132151432068	0.0962983915426134	0.923283588514646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48630020683226	2.57446609168857
Merged-chr8-126876630-4	7.26966196585479	0	1.36451122183616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132289368-3	6.37086164112897	0	1.35803359206704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55197462-7	17.6476412437589	0.234397967851986	0.523835967730807	0.447464439808074	0.654539757673382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32602482710398	3.19167839494613
Merged-chr14-72983262-1	5.61287561422406	3.33558258415654	1.19037518694238	2.80212711147346	0.00507668667156423	0.124644810650208	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.62438888480879
Merged-chr11-100360421-3	6.02417132342926	0	1.3652397206823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25606826-3	6.56211718054178	0	1.37870842045927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119444299-3	6.96656365385026	0	1.36659614592668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57429409-7	22.9145157572979	-0.134053282392603	0.299651665059219	-0.447363716020436	0.65461246927567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19599999060324	5.05049768904555
Merged-chr17-31874168-1	5.40404366364083	-1.41173293384134	0.850549901238655	-1.65978848717217	0.0969570106184582	0.893151354043174	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90657679739794	1.16492870185157
Merged-chr16-11460424-4	11.1543209836978	0	1.36042733916786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46480656-8	51.1054033127351	-0.741141161098461	0.348741277278762	-2.12518909972919	0.033570837212803	0.455195096046585	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70625476287414	4.00973378113197
Merged-chr11-111159514-4	7.72989408264259	0.517751354736072	0.869366626458381	0.595550069416955	0.551475841006317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	2.12382511851675
Merged-chr5-66363453-2	3.26063473353038	0	1.43501660656275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83013707-5	13.4790833592483	-1.77668267289037	0.691411114712338	-2.5696472548457	0.0101802115555347	0.203825458544128	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10273233636347	1.716880652154
Merged-chr12-85510734-3	7.54060207088133	0	1.3938010803065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14997802-4	5.60285553302903	0	1.36522032054092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84180283-3	8.25588772313789	0	1.35436264799437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131979837-3	5.88664656674591	0	1.37819333558499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40027228-1	2.42983375463429	-0.535641086189273	1.34617506244546	-0.397898535734445	0.690704979436332	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0.577068348605183
Merged-chr13-113417634-3	6.55220274650511	0	1.42424466072247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67348906-1	3.00073458410497	0	1.39263494932825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26600819-8	23.8372159894043	-0.11134216233057	0.340407243229312	-0.327085173847388	0.743603465180839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60003474374116	4.52751309451612
Merged-chr9-106361286-4	14.9204646408743	-0.181874954208414	0.587686323423269	-0.309476240911978	0.75695928269168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41035392788822	2.99947176833399
Merged-chr1-78678689-3	6.94680112562909	-2.96060691668977	1.02968777396436	-2.87524722692515	0.00403711252873446	0.10586271102242	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96894117841462	0.465515277017237
Merged-chr3-97971343-1	3.77290640392364	0	1.3893940554735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4595188-3	5.89199033261419	0	1.39040005443213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-29231805-4	11.2658738696341	0	1.3431013655867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45110652-3	5.81019260797528	-1.21277273813909	1.1407921514994	-1.06309702126289	0.287737955160492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48219169541115	0.55634759613363
Merged-chr6-97280911-10	51.1367542179263	0.28490559668661	0.364066469172039	0.782564780916363	0.433882730024886	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72887147957609	5.13149760819713
Merged-chrX-36108469-4	9.9175163902514	-2.06585246616026	0.63261159289141	-3.26559375353539	0.00109234838387263	0.038482803498984	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31487371029928	1.46460328489499
Merged-chr5-125314136-5	15.767034880904	0.00671002103493358	0.544498685777645	0.0123233006987894	0.990167677497146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69422113745304	2.51037136134184
Merged-chr1-78666172-7	22.1546728362243	0.0705434778847598	0.470598524550616	0.149901612955806	0.880842239142905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0039555254242	4.02496341881561
Merged-chr13-44504738-6	19.5784447502207	-0.446270324477088	0.670910673219438	-0.665171001581495	0.505941125758915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81960882153758	1.87786674940178
Merged-chr19-11803202-4	9.89542930755961	-0.533354076822918	0.512074145818648	-1.04155634721657	0.297617416225037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92526139965934	3.18788249916783
Merged-chr16-45657775-6	47.7023781653371	3.13222104079699	0.375424757448934	8.34313928064013	7.23438749888358e-17	1.06284883797787e-13	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01192432211591	6.74391544397322
Merged-chr15-103550233-3	5.1458200313656	0	1.38250935609685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47378897-4	7.64870383307985	0	1.37006066290967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67585081-4	6.61289686003599	0	1.38126776415225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36089658-4	9.18750605826953	0	1.38186364747887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148698794-4	6.60599217350131	0	1.37278025048694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153260800-4	7.03217441169318	0	1.36615654034559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32531622-2	5.37179327685589	0	1.49272446515125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105504099-2	12.4425681271373	0.523785703617967	0.617157282359295	0.848706996724752	0.396044351964589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59474803539537	4.21961434850279
Merged-chr5-21295845-4	6.93058841404133	0	1.37458970535485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24433628-4	7.42936466045797	0	1.36906100636082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44484050-4	11.9639200637742	0.659721520957724	0.778816221029777	0.847082409358934	0.396949189163231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29451429493117	2.11005512232597
Merged-chr17-30027885-3	7.47052386664834	0	1.36917605946436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46099129-8	14.4291983066981	0	1.34243637680827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88702340-2	4.22746488874985	0	1.39121149996498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84647826-4	6.88249621415216	0	1.37613556056156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-50972308-6	22.3068641878989	-0.0368097305683078	0.610191342043833	-0.0603248981622941	0.95189687218747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30095837608674	2.27439318040302
Merged-chr3-61605683-4	10.9837099708334	0	1.34743774081447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41284589-5	26.4238694612078	2.28683134054739	0.495306457038217	4.61700288387507	3.89321861669802e-06	0.000408554962905575	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30740926016447	4.82107045741729
Merged-chr12-16887525-5	18.3829695599064	-1.17952104503399	0.421629771582525	-2.7975278894724	0.0051495321232564	0.126205327632144	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26416534655507	4.11415624842016
Merged-chr2-3703964-3	6.1140509040214	0	1.35509601404981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117883785-4	9.51695866253365	0	1.35322590895469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133525650-6	16.6882640672721	0	1.33910534993592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-42009875-1	2.40762300461831	0	1.41822650603492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82922631-1	4.00468054348281	-0.366123194160874	0.963574741878749	-0.379963461315951	0.703972538288629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59845936419852	1.4658511336235
Merged-chr11-79658384-3	9.36234042975504	0.49621836656904	0.509774941674224	0.973406744826137	0.330351188022714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41960043867959	3.85678837334592
Merged-chr9-56105245-3	7.78913883646612	0	1.36630400018135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13247058-2	2.50496503364459	0	1.51137520326174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68434204-1	1.48522975426934	0	1.80806224942988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-118759732-1	2.79944068139028	0	1.42841367986239	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52703893-2	2.12863426506869	0	1.51245321415213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-71338833-3	5.3770911112477	0	1.45464865337846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100466773-1	1.99489520805095	0	1.46288611128199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103394713-2	3.2286461510216	0	1.42087055790536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-58333609-2	3.47983179722904	0	1.45714162622072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132021192-1	2.36108872810505	0	1.41814043224162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34206700-1	2.34311987332591	-0.0307236310274988	1.30603871135873	-0.0235242881855589	0.981232064673461	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr15-28081443-1	2.03084891928806	0	1.45719957257808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72689696-2	3.76283131126448	0	1.42527135787092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4865282-1	2.0152259832761	0	1.41517313011723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135333904-1	1.02036364355398	0	1.81168960148498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101516720-3	9.35678542860382	0	1.37306952085078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63007652-4	16.3273513807423	-2.1808145694991	1.19591116681884	-1.8235589983662	0.0682187700021304	0.721459945242374	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0
Merged-chr8-120321953-3	10.324882842217	0	1.36077893440779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47691807-1	3.64093742750116	0	1.38432483906703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25675239-1	1.98129020941779	0	1.46061346549493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46828944-1	2.58028971418714	0	1.40093148454329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29772839-2	4.8017149900404	0	1.42855297074786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39907267-1	2.35552512994997	0	1.44738852766899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31614927-2	3.86708798167228	0	1.39480188439737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139003731-4	7.48849984881546	0	1.36712980273135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148454313-1	3.16672493242661	0	1.44901965592144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95667198-1	1.68301987539055	0	1.56224213658765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34416176-2	3.1414038594235	0	1.52563057223757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140111285-1	2.63700709905408	0	1.49633585453724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72322506-11	149.50863339501	-0.0164184752387327	0.239034022249402	-0.0686867713818666	0.9452389482419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.89691728184439	6.98262728138491
Merged-chr11-87443554-8	34.2972819284751	0.346628905272529	0.389154919617916	0.890722146370036	0.373078250727706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36025064077761	4.75709486820212
Merged-chr18-4971028-4	6.62285839445654	0	1.40574384224271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73567181-4	7.41905068732483	0	1.34995471649511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75702867-6	23.5803088732504	-0.0363052321436814	0.900260563266322	-0.0403274714288927	0.967832052555604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	1.27992882773773
Merged-chr18-46452291-5	14.7400862190884	-0.340885300854134	0.496355234290761	-0.686776883377131	0.492223339168546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43221677169889	3.48767937560998
Merged-chr17-23700160-8	31.2964060228162	-0.271743388966471	0.384391526298178	-0.706944275237939	0.479601108067041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24915577791171	3.99724146093856
Merged-chr9-119963447-4	6.68967221103508	0	1.37198292753391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117328944-3	4.78650783472456	0	1.37732721513892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37048723-4	13.9635719231264	1.31136594863541	0.589721047820785	2.22370551887428	0.0261682636786994	0.388009281380115	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84812292246362	4.07179063670108
Merged-chr18-84859653-3	5.19523355565936	0	1.36680542347347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12350549-2	4.87845417940393	0	1.40259298035455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10294740-8	31.6052551355299	-0.213674142404859	0.389663388304371	-0.548355706022747	0.583447684222619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17940345299234	4.08418332213318
Merged-chr18-39572326-2	3.75283777415874	0	1.40029720645481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118178596-4	9.29207710108659	0	1.34393595540079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31191178-4	6.72009671008558	0	1.38862482145717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45526561-3	4.36912732078081	0	1.39068719433188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43383575-3	6.39837569272889	0	1.38157063093261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33270768-3	4.33483372411514	0	1.38445261145525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70729199-4	15.0802954206184	-1.08770261164504	0.802999425524033	-1.35454967596672	0.175561076199841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11916498288763	1.18909650862134
Merged-chr16-29451888-4	7.23659770813505	-1.9946460690093	1.05040468568376	-1.89893104647652	0.0575735426702193	0.649572479454224	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56343534314907	0.71701424649985
Merged-chr13-107118319-3	6.55747753807094	0	1.37773102311735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13646902-6	15.2878872872104	1.212369994076	0.568629426998995	2.13209154593778	0.0329993214891117	0.45068523680762	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66397071612377	3.62819339069959
Merged-chr2-73513425-2	6.11886312850485	0	1.38193412421092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78372813-4	5.66061544756419	0	1.38342639068859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78388320-2	3.91202313890274	0	1.37763759393057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125088766-5	19.0882555775153	0.272350981397608	0.515802907716146	0.528013660495855	0.597489854647538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21837701399511	3.36506946588313
Merged-chr16-49783547-4	7.34872422658967	0	1.35436187113962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99026457-4	7.58788618067181	0	1.35529109119814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77664275-1	4.0421368527099	0	1.38855497144461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49458417-3	5.156458798796	0	1.3927606683084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106817777-4	7.56435969031232	0	1.37830530395071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61137647-1	4.20782350607103	0	1.43517138604906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149110308-1	6.21196118813779	0.738490553422402	0.747549516732393	0.987881788286629	0.323210545583654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19098220643956	2.82432128384368
Merged-chr5-113012210-3	4.42195646416207	0	1.39361056135676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99639285-3	8.53288007746808	0	1.39062004980074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131253798-1	3.96162606765599	0	1.44508367824514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113172619-2	4.06459663144634	-0.196638208966632	1.05589279823672	-0.186229330567464	0.852264923804397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	1.69378000693571
Merged-chr1-161139635-5	17.8841651068014	0.856487935827915	0.41064527345737	2.08571239263717	0.0370046831994798	0.483643155747031	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47506129215157	5.20292696520538
Merged-chr1-177713816-4	6.33322626923962	0	1.3810567895866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96747029-4	4.28296652804086	0	1.39411652767149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84197462-4	9.87680367180144	0	1.38482313714385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32560546-7	34.3733687804967	-0.510156863560429	0.415703382244317	-1.22721364643745	0.219742301683022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.01709825299976	5.12029396624717
Merged-chr13-91640452-8	31.4664000129252	-0.909951200036548	0.385139121591101	-2.36265585349347	0.0181445102955252	0.300431749970896	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89201975437834	3.86162202738648
Merged-chr13-28858169-3	5.87540540657649	0	1.39159849256873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29892540-4	6.840565364724	0	1.35016552968935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70705548-2	7.38571699014473	-0.911155473775785	0.77319719138648	-1.17842574174632	0.238626920377329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21939322758713	1.57036776915508
Merged-chr19-36766363-3	13.9796012995006	3.62037628869142	0.750547668091491	4.82364604222593	1.40957470854241e-06	0.000171033641923341	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38660038197036	4.87414049407783
Merged-chr13-103065690-3	6.51777784582386	0	1.35497226576152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129423850-3	6.42007894136664	0	1.36111852342869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82909537-10	44.8042868674865	-0.25824892007984	0.424278750464904	-0.608677478654926	0.542738237756528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60198216159087	3.96398709823523
Merged-chr10-96163949-3	6.26018702607171	0	1.36404484469723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41092149-2	4.54237340291699	0	1.38076867987409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142748129-2	4.62662891131001	0	1.44248334568542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20776888-2	2.95600903699999	0	1.42254741555662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36279359-4	8.06810639355282	0	1.34855954106899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13441211-1	2.30449251654672	0	1.50671155192186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53570616-6	47.0570277258136	-0.0370526722888337	0.400247148245028	-0.0925744816703862	0.926241617347528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8504180720977	3.81407173515011
Merged-chr3-52501869-3	8.07235556628979	0	1.3715661260627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54877705-2	2.66359996571923	0	1.45436760490688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79088550-2	6.98592265112892	0	1.37076376378936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46733444-2	3.53609386184218	0	1.41027743878484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83695979-4	5.82431445256175	0	1.37417606645783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45060633-4	5.85267728496246	0	1.38274770617329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182868069-4	6.23844174691937	0	1.36488705711494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35376708-2	4.71093382543562	0	1.37147618308263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50824391-9	36.668503464479	1.1015822129317	0.298144374215478	3.69479456330627	0.000220064642369203	0.0112218516834404	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6594182565805	5.76354892222824
Merged-chr7-125546549-5	19.3238128149275	1.27046558213084	0.531082534138949	2.39221872395157	0.0167468589593362	0.286568808432423	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13314959900533	3.20766826564227
Merged-chr13-10210952-4	8.38734476015654	0	1.40173806624356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88696650-4	6.72727692829343	0	1.35547138251158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96517628-4	6.76207378286212	0	1.36582556991922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134090539-6	14.5258735742264	0.524206060802911	0.703316275990465	0.745334750094732	0.456069378618612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	2.78613848770464
Merged-chr3-79253206-8	25.9277888476386	1.99166886171569	0.391985115207151	5.08098084454855	3.75490985469222e-07	5.39981864527023e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30153012360587	5.46545132612601
Merged-chr11-106994453-6	20.5160669401352	0.319359305554439	0.453405619950041	0.704356742621824	0.48121063764821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79557489340392	3.67964392538846
Merged-chr2-58920785-4	8.2687598369967	0	1.36078073071174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42015701-2	6.8376323159574	0	1.36100976061317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138117194-2	11.535794998413	-2.52493017816883	0.658426645459004	-3.83479343611412	0.00012566986265971	0.00712334521826819	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8254110869041	1.62598992477189
Merged-chr17-5276066-4	6.76390721381308	0	1.36022586610015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72938977-2	5.6639951002442	0	1.37387236640103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94782860-3	11.0125210621333	0.444505267215742	0.708428451048876	0.627452591094586	0.530362603462854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.604600208635	3.61863046148871
Merged-chr11-86734387-4	11.0541064873563	0	1.35611769250305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-31951001-4	6.24624745681509	0	1.38118666429702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9444997-4	6.82053557755507	0	1.39798235992759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131505898-4	6.58249664186839	0	1.38801711095799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145889460-7	22.4044662387722	0.330803851342889	0.418193125241618	0.791031299598148	0.42892572695593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65555191827631	4.71607638055366
Merged-chr6-116186695-2	3.37779991501906	0	1.39394580174723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28408514-2	4.84756108859431	0	1.3666535295456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119434557-2	4.9370695362573	-2.78083124183718	1.18600745439263	-2.34469963197767	0.0190424133570221	0.309732659387901	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2972429702454	0
Merged-chr6-108307093-2	5.86322718887609	0	1.36100446398539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83947679-4	6.89564136323415	0	1.35404344171549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88407203-3	6.33500782210219	0	1.3742677338679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12464844-3	18.6132015962234	0.935832848583054	0.443552858715569	2.10985642453758	0.0348707245975709	0.467226452649582	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72512413206444	4.66195415351185
Merged-chr9-116350938-1	3.39035976093528	0	1.393568992397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61774933-3	6.5322541650153	0	1.36371782114388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125667274-3	5.84009458993066	0	1.37416971717472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52586799-4	7.35045721473189	0	1.35970069362773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131430232-3	4.6325176868571	0	1.42099475272563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45754062-4	5.39235705217463	0	1.36857321101287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51913974-3	3.40638437778137	0	1.4220002301536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50972752-3	6.62200644157706	0	1.38921839033502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151842281-3	6.19250794221958	0	1.36320931250006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86666017-9	20.1145087181895	-0.414999726497763	0.645842862537338	-0.642570740609169	0.520502673819489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7871976115512	2.46657426367291
Merged-chr4-138091991-4	12.8807042875122	0.447260450787897	0.559904316904623	0.798815864218611	0.42439719033456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39401765632919	3.24156486142669
Merged-chr3-30593893-4	6.77648989702882	0	1.36460169783813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34703299-3	6.32205874872557	-0.645215825349111	1.09561816348436	-0.588905740022738	0.555924507005219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	1.15786140276852
Merged-chr11-117317146-4	6.62054861947649	0	1.37408822502579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16108978-5	13.055325414604	-1.32265656469544	0.848270893591372	-1.55923841627482	0.118939961470903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37850366884776	1.18984215491549
Merged-chr6-122560553-7	24.3148652922781	-0.112731668973373	0.382372972398787	-0.294821227206932	0.768130449829238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0815688083911	4.90204779938276
Merged-chr12-85963848-4	7.10013088548979	0	1.36730483542945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72078318-4	15.8988174165532	0.0261296394301136	0.764660898542489	0.0341715386257085	0.97274036216771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99186294665078	1.12215872791278
Merged-chr2-142703089-4	5.62151183639793	0	1.3704282967003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88581703-2	6.57736746043348	0	1.36464562948832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79396947-6	20.5120443714451	-1.33029823466656	0.453788892269203	-2.93153547239624	0.00337290844014649	0.0931801153991406	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08236573584965	3.60864975589196
Merged-chr16-44832463-4	5.92791235067135	0	1.38207853213807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27213143-3	5.41881930775707	0	1.4916207365742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17655679-5	11.3593820270715	0.538081180172897	0.719004063012502	0.748370152344385	0.454236920795778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32373923090461	2.70042787204006
Merged-chr16-91056222-4	8.55632842749836	0	1.35826164310465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113100914-4	9.02717155671183	0	1.36628457158815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25392692-5	13.6106253889513	0	1.34440322291313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13298042-3	9.40645483713389	0	1.35207910191623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71866762-3	12.6549748134676	1.93579061266663	0.52611650838034	3.67939530851447	0.000233787638164391	0.0118218253237006	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68063488395717	5.26495328547873
Merged-chr9-116182298-5	13.5175852631841	-0.543684102404667	0.544635425614466	-0.99825328437142	0.318156554211319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73804981657653	3.21113666187683
Merged-chr1-156620229-5	14.5170113885623	0.0228233175832156	0.815064483592373	0.0280018551202507	0.977660671556247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65917935940748	1.15946677988263
Merged-chr7-80154899-4	8.31423826250398	0	1.36025383802691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131270525-4	13.2076043852127	-0.932539733408278	0.656309337848206	-1.42088445132554	0.155350353936201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32500372216053	1.9872420510626
Merged-chr14-64633589-2	5.81374908987225	1.42325963883416	1.14447863428761	1.24358777542412	0.213651317616854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.40024388691264
Merged-chr14-50060670-3	9.89527143987004	1.62453331768854	0.957855929163278	1.696010086932	0.0898839698151734	0.850775329128158	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.40121888407851
Merged-chr5-100639107-7	16.2971846901809	-1.43349898332636	0.483738930839152	-2.96337319975392	0.00304287399809047	0.0860153861997919	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03248334428773	2.65220817196749
Merged-chr19-33110038-4	6.82576176615178	0	1.39891522238453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69215841-4	6.9676324294493	0	1.37389230679493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9738336-3	5.88625251051741	0	1.39553964012504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48575868-2	6.988383742345	-1.00269973950959	1.0724708503331	-0.934943583033657	0.349817374826473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.724326877898254
Merged-chr9-96399754-8	65.8055502500824	-0.20086059356037	0.339502453902348	-0.591632229021072	0.554096887307109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55700495079522	4.3205842052472
Merged-chr8-70600890-4	9.90298910593998	1.10043266092041	0.870869561267893	1.26360216255383	0.206372857015558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.28966581249056
Merged-chr3-109419492-1	4.75954030070343	2.45397736401452	0.956600665763184	2.56531011512177	0.0103083626497512	0.205348190940542	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	3.21249001478609
Merged-chr5-43692709-2	4.09305095498295	0	2.14176900532076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46735435-4	9.06014692541033	-0.539078534242738	1.19223016559627	-0.452159784074186	0.651153877539137	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.55634759613363
Merged-chr18-46544764-1	1.95400470727428	0	1.5359584501324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57657041-3	6.83319784127832	0	1.3627441000158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34592099-1	1.30376691391335	2.17582685456749	1.58918237585786	1.36914861857372	0.170952823373873	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02748994520012
Merged-chr9-119994324-2	6.0579624849497	0	1.37867273012662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-21271548-1	3.00695419105136	0	1.49486867008127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44298191-1	2.1981815610931	0	1.45386454949722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33772119-1	1.94997315022298	0	1.57512879910509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-47954032-1	5.90148446167722	0.431164526311147	0.895594274242576	0.481428408724243	0.630212049964591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14227273603934	3.08735490125361
Merged-chr6-16360182-1	1.56988699434924	0	1.75230793443137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-59207126-1	4.31846462562801	0	1.42483662943634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102993986-2	2.62935922800531	0	2.42008083480878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19929168-1	1.91643165671833	0	1.57961058013485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100151013-2	4.78205777864296	0	1.38110137417418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4270826-1	2.28709240226178	-2.2065492641229	1.46252292207949	-1.50872798696755	0.131368310352956	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0
Merged-chr17-5770803-2	5.97338977727488	0	1.38073126066545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120024767-1	2.2543496112325	0	1.48221460348551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154019674-2	4.94905900075224	0	1.37641760807675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5807334-1	2.21552566704357	0	1.43074882140211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38290305-1	1.97984294034476	0	1.53188624776834	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124919778-2	8.91221188485906	0.711666074582999	0.818390705768751	0.869592078168213	0.384523368500524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16544699046655	3.33353207007909
Merged-chr1-152616213-4	10.4605082008247	0	1.35216136047201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112440077-7	36.6956877694454	0.549595503581073	0.379676650149008	1.44753569482184	0.147746946683559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75225060332627	4.18537302014814
Merged-chr2-48690822-4	6.73285197707926	0	1.38146374971097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87960237-4	6.39284519879953	0	1.35302216509127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54848915-2	4.93005703915052	0	1.37690699606907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12135287-6	9.96809989232422	0	1.37009823852482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9612038-4	8.38601261231396	0	1.3679552574122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3722993-6	29.7408862742288	-0.372791127075373	0.477845347649779	-0.780150165548118	0.435302491395833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30911195552663	2.57916216333554
Merged-chr16-26035712-2	3.98509815615088	0	1.425679219341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8349727-4	8.76229377014276	0	1.35187989858795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69691232-7	21.6546549211891	2.17033736761522	0.650423345753767	3.33680729909848	0.000847466843097622	0.0316180165572709	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	3.72857494756724
Merged-chr17-43032690-7	25.6574813718594	-1.19010369044962	0.412041268278134	-2.88831188056212	0.0038731562884253	0.102753002773309	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73142055832669	3.02196444318213
Merged-chr7-25765242-3	6.65024976806305	0	1.38505082230459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118651207-6	21.0177306371712	0.0202572311239864	0.524315621455406	0.0386355666225544	0.969180945387804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11742056194996	3.20260074621358
Merged-chr15-95793958-4	11.2724008933677	0	1.36009987581023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5273048-4	5.61635795358799	0	1.37768142875076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43496806-5	16.4762265392761	0.17951563745214	0.55007741075184	0.326346135913453	0.744162485777782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30895033782959	3.50765751860654
Merged-chr6-51171078-3	6.18440657406886	0	1.40910356477255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104401380-8	39.251320410273	0.167028212870631	0.422212946462532	0.395601826684993	0.692398789317558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01749210337406	4.12055087358197
Merged-chr10-17654531-2	5.24989840850422	0.122370405200929	1.23180299116454	0.0993425134365362	0.920866324501111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.662147012823607
Merged-chr7-118485252-7	19.6779864593044	-2.19183703409493	0.615415993634942	-3.56155357800971	0.000368666854670675	0.0170847072063455	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62504096328659	1.89077925469197
Merged-chr7-119880497-6	14.8468577780749	-0.095385116352499	0.908199265793133	-0.105026638916294	0.916354670814754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.25298535761957
Merged-chr10-88122773-5	18.1064202059394	-0.545764071156863	0.476817501784997	-1.14459739651703	0.252375971269806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33558900116597	4.83919867090062
Merged-chr7-47035632-4	7.31076426829857	0	1.37093548732747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-6624720-4	7.87398704146296	0	1.37114185097411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81520213-3	5.73409684628453	0	1.35909908594355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21508682-3	12.2781494586837	-3.1205600113213	0.65333646446779	-4.77634447338451	1.78510497169145e-06	0.000206022337911201	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19041851496452	2.09070472502837
Merged-chr8-117480682-3	6.6623952488149	0	1.35752485818171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75006076-4	10.2100301521293	0	1.36434393348161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148523058-2	3.68080831814094	0	1.41611396142418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155363581-2	9.52675157145113	-0.527525961942016	0.632725121997176	-0.833736394529266	0.40442954461964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08645630424098	3.65480106775391
Merged-chr1-53741897-2	7.67088350523352	3.65985212123852	1.11665519643722	3.27751317767166	0.00104725842072991	0.0371869937058407	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.02004371945587
Merged-chr15-50705439-4	10.6370408111793	0	1.34357976322694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145860548-2	4.69477721264607	0	1.4160396250109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15300285-4	12.6345241019752	0	1.34375467141234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109439494-3	10.1241750148714	-1.14853125131804	0.701738220748537	-1.63669473510066	0.101694269613244	0.921026124942741	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76395706063606	1.82011828833849
Merged-chr4-86686717-5	12.3111264397771	0.379861659127001	0.792831233447221	0.479120452249803	0.631852940661409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	2.11651248711834
Merged-chr4-59368348-6	16.5819377220845	-0.873168164764176	0.505152214388284	-1.72852486813612	0.0838941665094991	0.817423014391443	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6688605591006	3.00717000215863
Merged-chr11-37079658-3	5.58117501061152	0	1.38428308692015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159650234-4	8.11354100003597	0	1.36538090623219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60809736-4	12.3062903126436	0	1.35794720898918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112297448-4	7.63692684081928	0	1.40862437669471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163755996-4	15.1544892409358	-2.77184439244864	0.720440174940999	-3.84743173529384	0.000119362520767392	0.00681557485965828	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89943740148457	1.67656321522231
Merged-chr9-41143362-3	10.3114387208233	1.06844361763318	0.735122371133676	1.45342280358775	0.14610639886665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11214589433476	4.74067876829435
Merged-chr11-31900685-4	12.373143642219	0.146408327426418	0.685559811247892	0.213560254006019	0.830889996987152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44181999537264	3.02046200754364
Merged-chr6-5104461-1	3.01638437804556	0	1.41291510617806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70963049-3	8.97947741614427	0	1.3550408221739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33951521-3	7.41067395728751	0	1.40517582194011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24758502-3	7.88625729320781	0	1.37274969164269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41002079-5	20.953265244155	0.794003999120528	0.45352760385699	1.750729155994	0.0799925747304295	0.793923018033854	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76377488106014	5.51888712706429
Merged-chr15-73176751-2	5.68656077980581	0	1.37233459667755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116019707-4	12.0740043063869	-1.27884599524283	0.736984853628629	-1.73524053981066	0.0826982086679017	0.810488592934498	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52306254531496	2.0560328530563
Merged-chr8-111178003-2	9.12566018969301	-0.0370806828821216	0.546598102386137	-0.0678390260051184	0.945913777044763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75182056075824	3.71592064623793
Merged-chr11-86836571-3	6.01268702874493	0	1.35266321473721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24620272-6	14.7966307022649	0	1.33808776869094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5807915-3	7.55329255453185	0	1.37263913828765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136644829-1	5.85690758273921	-1.39593955640877	0.922012950962072	-1.51401295931058	0.130022552687353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71158884927678	1.45451904642141
Merged-chr16-97992677-4	9.1087316394142	0	1.34409721674994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131378163-5	14.1630223344023	1.23732679642144	0.782784946610355	1.5806727017163	0.113952893177003	0.986049875868945	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	2.80291611944662
Merged-chr10-94355232-4	7.34152943829275	0	1.36671117188959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125354856-9	35.107389929576	1.09061050380224	0.464649682492882	2.34716722058441	0.0189167628059421	0.308983266036119	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55707181745548	4.16556485805263
Merged-chr14-50820113-6	21.0280990345305	1.54861158772075	0.437385338595663	3.54061156391973	0.000399200821941048	0.018174336247817	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03930997358261	5.56415172961425
Merged-chrX-159757025-2	4.30520339204727	0	1.37680199579567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90206707-3	5.22260327014709	0	1.39226040480109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116268063-2	3.83422017562716	0	1.41122484529845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52760539-3	13.9294467794063	-0.5086486875103	0.503445113224155	-1.01033593166258	0.312334371749077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22308452779036	4.84914518871928
Merged-chr11-11773381-2	4.48381464509053	0.327922931599709	1.31706235965178	0.248980565875718	0.803375814313009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.577068348605183
Merged-chr2-173352385-4	9.78551798199135	0	1.36724588793437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144316724-3	4.12637456812208	0	1.43229135762383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37454380-2	5.01229829984238	-0.100249477859927	1.21444712667151	-0.0825474206807874	0.934211410723219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.841757702988201
Merged-chr13-117052958-4	7.01045189178183	0	1.36394840918282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34338867-1	2.1742864801638	0	1.479162393011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119733764-6	70.166122265791	-0.940001601898547	0.460341787052663	-2.04196453230306	0.0411550496558191	0.517498807365411	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24992245472598	2.70603492854298
Merged-chr8-125068741-2	6.80125474930789	-0.408063458154562	0.875296777273214	-0.466200114920781	0.64107226710361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33928634671025	2.75989544352611
Merged-chr10-84886563-5	13.6254842836235	0.309461605594859	0.665251976649289	0.46517953566037	0.64180289241186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02684776513479	2.43966724675336
Merged-chr14-33240585-4	9.6083569976468	0	1.35385092247588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53466780-3	4.93351849454233	0	1.38033883216537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168557079-3	5.59288210222555	0	1.37173032071893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43855010-7	19.7022568114532	-1.08208286658066	0.530749289737097	-2.03878344729706	0.0414716450458116	0.52051654422657	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07206132519206	3.13370926521562
Merged-chr6-148761611-4	6.23275417412435	0	1.36023831140404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33400186-3	7.90345299606391	0	1.4460531154559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99266504-5	16.7182029272336	0.653358884569222	0.516384171237824	1.2652573819276	0.205779078593816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59252346797052	3.38598553655172
Merged-chr6-54162999-8	21.9818845271396	0.206874742942612	0.392522901328308	0.527038657470794	0.59816674362544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78573160113651	5.00680920237512
Merged-chrX-68692026-2	3.36750503265224	0	1.41265631391895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66810254-4	7.0543580269204	0	1.36617307270927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167340490-1	4.67439563071886	0	1.42638357245243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57593922-1	3.24154850306191	0	1.40057903593588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26168202-3	7.8238950180823	0	1.36897118878907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14243975-1	2.0075809720094	0	1.49278002126914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100137554-4	7.67044066445457	0	1.37359009810699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75667178-3	9.86229566556228	0	1.40995707361861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72325625-1	7.37520732464272	-0.560647136324416	0.605832222252923	-0.925416502673831	0.354749297907423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43878551644104	2.79941410944385
Merged-chr6-124993505-4	14.2136758023662	-1.83378742643159	0.714202934476358	-2.56759996061357	0.0102405259216523	0.204455039164189	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83017569451919	1.39949824061849
Merged-chr8-11015789-3	8.92622686325143	0	1.36706760225289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83128208-4	8.82519815041428	0	1.3507135702407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111016987-4	7.79264955017056	0	1.36365039115575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6441865-2	5.46368819964847	0	1.41215681811295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87462576-4	11.8420617868998	0	1.38020515087843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149980046-4	19.4968475621346	0	1.37859059755696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-43303185-5	17.75755333735	-0.556400782749396	0.62290481379862	-0.893235644393776	0.37173099350816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93859551777556	3.32282814587798
Merged-chr5-125334835-4	13.5951825502558	-1.17306800771359	0.592714524930952	-1.97914503250995	0.0477996795517882	0.572196164006971	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99103206777474	2.1893145161846
Merged-chr15-31473017-3	8.26058612734143	0	1.35342658873985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68705668-3	10.4945997371684	0	1.37455337966462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165188976-4	6.05148932481079	0	1.36467105882589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103051374-4	12.5604458581228	-0.00681776518095005	0.604407977389657	-0.0112800714682736	0.99099999599122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54091155405927	3.54735579547719
Merged-chr12-26425320-5	14.6065940734724	-2.0321392924342	0.582673618671344	-3.48761163594129	0.000487355419649288	0.0210756986926934	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04643173875247	2.18974480055467
Merged-chr6-135261311-3	9.68153583973797	0.637299584843738	0.520550470015043	1.22428010645216	0.220846578884716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2196220251985	3.75487355793445
Merged-chr10-56840932-3	5.41661761834273	0	1.35651642928513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39638977-2	3.79157820556782	0	1.37624642697942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100791633-3	7.96080055223699	0	1.36015726734473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141735063-8	28.4051098691081	0.185192900565111	0.401850955167524	0.460849720981521	0.644906426536724	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09297499641161	4.39112649804667
Merged-chr12-111458762-4	8.79380464911452	0	1.34994874233648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147086804-2	8.38512701684722	-1.87269074113694	1.28388777330946	-1.45860937386274	0.144672652116511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr13-33959933-3	5.43533863320786	0	1.40694442181883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-26853906-7	28.6940182757957	-1.02582304509687	0.458460007140939	-2.23754096130247	0.0252510052914587	0.377093240834726	C57BL6J_F1_Control-BALBCJ_F1_Control	6.07583455896736	5.06907614996497
Merged-chr7-113134046-5	25.7723988883679	-4.17274676323628	1.02570939320544	-4.06815691742479	4.7386467136573e-05	0.00316836527315741	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72070871003925	0.303163067301871
Merged-chr19-55585419-4	6.19874648132655	0	1.37235443604241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153111541-7	42.2651572642399	0.528790114249327	0.441899956156609	1.19662857368993	0.231451358143085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45638366532437	4.02382185173251
Merged-chr18-9828195-4	13.4746426850002	-2.52940373870228	0.553627350866318	-4.56878392070816	4.9056220426489e-06	0.000492904563075948	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01445417416264	2.14031122916015
Merged-chr2-126164787-3	7.29771280018125	0	1.36585233431577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152461672-3	9.2096305418662	3.35399661609461	1.18732243673073	2.82484059286354	0.00473041434868526	0.118443387185713	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.96407541330571
Merged-chr10-88676404-6	21.8211689840373	-0.473774789674026	0.358501104846846	-1.32154345765943	0.186320222271234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81904029844056	4.42069991984067
Merged-chr11-116103711-4	7.47359897438022	0	1.36539216100543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69664132-6	32.1539185682452	-0.310033542361426	0.558942947115856	-0.554678333381248	0.579114698620583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67581079034627	3.01614957321096
Merged-chr1-105987285-4	7.71088902377486	0.641103797829407	1.06484908805082	0.602060709844748	0.547133726710028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	1.33175291456033
Merged-chr9-85573926-1	2.55418832167439	-0.0332782431350346	1.38460244614042	-0.0240345112980247	0.980825080616713	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr12-113898873-1	2.6847814576292	1.65349088306844	2.45347407073719	0.673938601100286	0.500350349639891	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	2.48641277829852
Merged-chr6-128133896-1	4.04410275225926	0.635313913754224	1.14602456725921	0.554363258785646	0.579330265543836	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.18909650862134
Merged-chr16-92475519-1	3.30664707349562	0	1.40851454789881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35551973-1	2.01149508411638	0	1.53333379167361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182461524-1	3.48287032512194	0	1.42457721940632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7525361-1	1.95131670630362	0	1.67063369319642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103605121-1	2.36374399465486	0	1.47295447515338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61138709-1	2.80303596434799	0	1.46351360457667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-166499687-3	4.76134044799949	0	1.41290463181649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95617894-1	1.44466827239231	0	1.62610525685264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9804765-1	2.19087563564884	0	1.45964689983924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80373700-1	1.9728684245197	0	1.56526792840389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45244076-1	3.00693657786992	0	1.45842708549023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35196078-4	7.85141665989641	0	1.35104614338963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114869605-2	3.50666797030805	0	1.41102331421487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8977242-1	3.87014145690177	1.32895385122049	1.1470237718065	1.15861055706584	0.246614963705483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3545212614855	3.08038790779177
Merged-chr5-66114765-2	8.27560365815991	-1.02392152769079	0.786511140467056	-1.30185254220652	0.192966798379708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63557780014842	1.97731223551783
Merged-chr11-4122733-2	4.0569898707356	0	1.38427604045806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24980303-12	42.7267978946609	0.83691838252104	0.284710907225998	2.93953747917607	0.00328702513939422	0.0916397699570683	C57BL6J_F1_Control-BALBCJ_F1_Control	5.73984159334007	6.60296038128957
Merged-chr19-60950721-3	6.77236539734985	-0.0356091331962056	1.40533285621581	-0.0253385758674224	0.979784904707305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.413263464506793
Merged-chr9-13523260-3	12.7724717913039	1.84301958318643	0.744769608431662	2.47461706589701	0.0133379100559042	0.245798812802178	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	3.79301009049672
Merged-chr8-107455408-2	4.32213727654114	0	1.36302328928658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90323462-7	31.715932390893	-0.893256874583934	0.316010336451549	-2.82666980015348	0.00470348002671617	0.117986373222088	C57BL6J_F1_Control-BALBCJ_F1_Control	6.21788621799798	5.29223780430637
Merged-chr11-119091508-3	8.76717320839963	0	1.35473988207343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-40835795-6	14.3340185888367	0.18927523469208	0.715219369907683	0.264639413662008	0.791287254563464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75888520587568	2.76986045445247
Merged-chr1-16797942-2	5.57478094201292	0	1.37509923395109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41104591-2	4.50055932163265	0	1.47532407831857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44527689-2	4.38470521843905	0	1.38092043315029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30554022-4	5.51505044832125	0	1.37280918800161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6391740-4	9.25561618852103	0	1.3786153433082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-99142430-3	4.50576146951846	0	1.39563398967787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12241111-2	6.00849192662928	0	1.38345311829577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27032999-2	3.03709912355586	0	1.38962453517603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62228519-2	6.56807332787197	-1.3232241076628	0.996830325592889	-1.32743163373945	0.184365941187912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0.67591700901439
Merged-chr8-115530143-4	8.87107258214781	0	1.35032411608461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97450988-2	5.27998860350734	0	1.37623147346587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54316872-1	5.90278000841561	-0.50983923191195	0.846120946585948	-0.602560702425727	0.546800969605624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.780058382249	1.58383754133375
Merged-chr6-125526252-1	5.86066894151613	0.450068038057504	0.944547884014895	0.476490441272755	0.633725015625983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51124524563069	2.38865251700747
Merged-chr17-57098457-6	19.3439924153014	2.93745110582672	0.990935408489794	2.96432146904858	0.00303351206349945	0.0858400219988373	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	3.22719912715514
Merged-chr13-44646091-3	5.66668208227068	0	1.39692472758323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5275472-9	35.429851000793	0.564291260102462	0.375799188946489	1.50157657786434	0.133206496070395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36747405787838	4.95267476259849
Merged-chr13-12409345-4	5.8567475961733	0	1.3975806300293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15321739-1	3.61159438157347	0	1.41318925740252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67223019-2	5.09925896874112	0	1.38489625082782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-70954868-2	10.965787230956	-4.73563673578864	0.987021006415122	-4.7979087628424	1.60330775686004e-06	0.000189054677559989	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73820597761007	0.465515277017237
Merged-chr6-101545798-1	2.6417513661766	0	1.40943950212704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74576035-7	21.8599010713265	-0.0379473242725726	0.525299712543516	-0.072239377571388	0.942411408247524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6267804556451	3.59157025113993
Merged-chr5-3360125-3	6.21870069041949	0	1.36070631967796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21280677-7	21.8861342704155	-1.47821472699599	0.488809693875197	-3.02411090761512	0.0024936500428342	0.0738302411102529	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4735839135149	3.05370021921966
Merged-chr12-73606079-4	5.83763841164802	0	1.3507395120132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56616529-3	7.19825761556997	0	1.3523402967589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-42529919-2	5.52926391177637	0.814048036424878	1.19087005191798	0.683574194441949	0.494244084481671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.953310774576147
Merged-chr11-32554092-7	39.1006318825063	0.26347052612572	0.424514131419997	0.620640178088801	0.534836397881396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61934315247402	4.01813181015361
Merged-chr13-63258403-6	20.3148577277341	-0.137787398908751	0.591341119685961	-0.233008316725758	0.81575494768983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4066179430359	2.87739529177345
Merged-chr12-56336126-2	6.14635288919693	0	1.37693709216335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13199398-3	8.63694034470893	-0.368418441929877	0.686795895242329	-0.536430756913426	0.591660879373889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9922406576469	3.08053395949925
Merged-chr8-83773342-1	7.7007200541097	0.640222411547714	0.564307733694575	1.13452709101844	0.256573516557534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92578707161297	4.13025757202395
Merged-chr1-135699567-4	9.32840060985772	0	1.35482590359009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3418959-3	9.8985517233563	0	1.34895885655589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21367683-4	6.73805861988954	0	1.3496683879244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18423291-3	6.39343176138191	0	1.3694529979323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136450491-4	10.7924145184355	-1.90273027765297	0.612079640248168	-3.10863187163276	0.00187955746687322	0.0593671495303669	C57BL6J_F1_Control-BALBCJ_F1_Control	4.470397964386	2.66260247574315
Merged-chr1-105984295-3	14.250855467777	0	1.38888146345957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26068464-5	12.9867512442797	-0.350181599969238	0.585069197707164	-0.598530227435608	0.549486195937804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27536759916832	2.85814068914253
Merged-chr3-121105012-4	5.59789916312885	0	1.38463845330126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50973537-2	6.7167706895269	0	1.3866068616278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124922429-16	52.3706805078171	-0.600133868115142	0.283607903499487	-2.11606891313672	0.0343389469564392	0.462724545762291	C57BL6J_F1_Control-BALBCJ_F1_Control	5.95640858183932	5.32273541448317
Merged-chr3-60615490-7	15.1668449727137	0	1.35377460336868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30972098-8	25.1253186534951	0.87243401755869	0.378249269427923	2.30650549273549	0.0210824035705768	0.331890638775843	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03840976679356	4.86920887127804
Merged-chr1-131084365-12	67.8235798400631	0.331892585165048	0.320505794367017	1.03552756611006	0.30042259962635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03206354349168	5.40847283892973
Merged-chr11-117325712-4	8.37433092046693	0	1.3551876430735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125513616-2	5.17627800532859	-1.87919109170551	1.28551418940952	-1.46182057513398	0.143790384330774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr7-6940969-2	4.25668222695094	0	1.37060675866493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54110885-5	16.8178469594184	-0.261445754455992	0.866983376373316	-0.3015579785966	0.762989045674927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.39293125551424
Merged-chr8-72013903-3	12.6301545378131	2.76296873448868	0.570933181993207	4.83939070565627	1.30237789152625e-06	0.000160899908648807	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86123704904507	4.84318675073763
Merged-chr4-46575008-5	12.5774479500374	-1.09937334019712	0.519488667763916	-2.11626048539086	0.0343226594688715	0.462619748591219	C57BL6J_F1_Control-BALBCJ_F1_Control	3.890833627958	2.81428474015231
Merged-chr16-95659697-3	6.59098356985637	0	1.36151421695866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138958732-8	21.7014075851362	-0.164986785360051	0.369745105068458	-0.446217632359201	0.655440047428842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50754944676654	4.23855664239183
Merged-chr14-25857362-6	17.6297307249932	0.362160296544283	0.592991262454392	0.610734625406285	0.541375279191825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5849202136255	3.32692121971712
Merged-chr4-70578417-2	4.0195528985983	0	1.40706214701177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-112348142-2	4.33476100800054	-1.35652169316806	1.46447611071974	-0.926284616893733	0.354298088157376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr3-28107571-3	8.74913045437947	0	1.38011684293679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53807670-2	7.89973052891523	-1.32228612202556	0.988956904744767	-1.33705130696956	0.181205889881417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	0.724326877898254
Merged-chr13-102665759-1	4.06978029570491	0	1.3760969782948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78473595-2	3.68581829552592	0	1.44697659557132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121408126-2	3.38809884071368	0	1.40198395311147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75833887-2	7.19337001865453	0	1.3610174225861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123332997-13	89.9383020284805	1.08374230867186	0.240339245910995	4.50921906059903	6.50666961324416e-06	0.000616195215167839	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24809094823181	7.34816189636369
Merged-chr9-86544771-5	16.2398001916141	1.6999293042048	0.74661255833517	2.27685602823958	0.0227948244419214	0.352418618270308	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63412505265868	3.16836371433483
Merged-chr17-8838452-4	7.27058058750034	0	1.37483818377053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29258536-4	7.42268270675584	0	1.37326113520493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76283677-6	12.64302058864	0	1.35006818183702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-20961983-3	6.35504719440434	-1.76590352429406	1.30523325833718	-1.35294094983739	0.17607449581383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr13-112337279-7	35.4025846818306	-0.340122749076673	0.323142649265317	-1.05254676177831	0.292548768086897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18767182549259	4.86294240257158
Merged-chr19-10173603-4	8.8995541161004	-0.988679124343176	1.00051175199554	-0.988173424621187	0.323067721031612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.723581231604105
Merged-chr5-86792968-3	4.30063070229008	0	1.40022261443174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52579646-4	6.63815520816053	0	1.37469317804855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65987043-4	7.11811518723467	0	1.35060503061052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24967157-4	9.64511117168004	-0.759295150472224	0.914978742874195	-0.829850044479802	0.406623572128454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76891977860032	0.815775955292901
Merged-chr10-44598872-4	7.86906987508276	0	1.36072799235747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100750760-4	8.78695052375626	0	1.37004534639259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-3228333-2	4.18830974818464	0	1.4037531430085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105559929-2	3.74733259255988	0	1.37150313062132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86006697-3	6.03059087898107	0	1.37528780704763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12021438-3	5.00768809050245	0	1.37482734242392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142538763-3	4.89754942545098	0	1.43380264120733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122925766-3	3.4719001426399	0	1.41752456577639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19183601-4	6.72084766420675	0	1.3596273868404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91179428-4	6.72477284844922	0	1.36029689595339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32780519-2	4.00334562071158	0	1.38033782888868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74240359-4	7.70624131059745	0	1.35317561767808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16574691-3	6.22587516372043	0	1.36434701439764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160086252-5	15.8655414826565	0.0596100965725164	0.617626397587605	0.0965148134946115	0.923111709382018	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91790730682473	2.50773376845066
Merged-chr5-72812656-7	14.9324968672812	0	1.34507845706381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80081443-3	7.4625182425321	-0.144856919913213	0.845750965841289	-0.17127609162009	0.864006678790207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	1.83763882844377
Merged-chr4-44016341-2	4.12251286283767	0	1.37421180800696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83448017-2	3.90322362504334	0	1.37614796725879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112394161-2	2.76286656424022	0	1.42336787776877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57292470-4	11.3342624542747	0	1.35943284624517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3345306-4	13.4323159737268	6.24355417462044	0.989001767538628	6.31298586064112	2.73702513409432e-10	8.70069878738206e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	0	5.07440675794369
Merged-chr8-79448754-3	5.23047081860695	0	1.36170531997671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60968757-4	7.39209678556412	0	1.36213687500847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11513657-6	17.6755615878514	0.203969192788174	0.768424877222693	0.26543803933753	0.79067203562365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54084633208408	1.30430658010148
Merged-chr5-88500064-4	6.28374368076252	0	1.37522142846795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17851572-2	3.33199600309225	0	1.38813037026961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99294015-4	20.9981155341663	0.821682944358257	0.422224852719643	1.94607905968968	0.0516452435527568	0.603219551844501	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67575300755428	4.44473262433043
Merged-chr3-95957557-4	10.1138170346153	0	1.35797740650073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87746924-4	6.34127221707195	0	1.35965088373297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5365610-3	8.33559767726828	2.98214352825439	1.04140156003346	2.86358657668859	0.00418874326138561	0.10873064478047	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.64642396890742
Merged-chr8-35645550-5	11.8106995966257	0.975525502185902	0.647171866231002	1.50736698099558	0.131716617441605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40184156770979	2.76515072779593
Merged-chr4-105560999-5	11.7573376625153	-0.192408329396808	0.514509103199155	-0.373964869038149	0.708430453393823	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92294974609508	3.72101101233986
Merged-chr14-65064814-4	8.40434655626967	0	1.36175261449191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78430677-3	5.45561393924039	0	1.37185723876601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9772945-6	12.7091267356134	-1.10172910172853	0.774374176020164	-1.42273481715361	0.154813043447588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61093010937348	0.887876939341704
Merged-chr9-107265006-3	9.9776699472228	0.693027464778935	0.858107711753439	0.807622930416063	0.419307682278903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.67188023179497
Merged-chr5-90857750-2	4.49276340623352	-2.70744460978282	1.17584885338007	-2.3025447547957	0.0213044705570856	0.334721302233448	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	0.303163067301871
Merged-chr3-138026478-4	7.36845023365333	0	1.35508879612027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50095877-4	7.64685587330466	0	1.37328684513828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5765939-4	9.34716417609564	0	1.38884527035041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55506593-10	43.5493556851502	-0.220517922752132	0.316962352857714	-0.695722759387529	0.486602469520921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29464546048675	5.09982454166245
Merged-chr9-59760727-4	5.9176525966503	0	1.36344881277965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74729614-4	13.7408362919907	-2.23346545837523	0.709260605949469	-3.14900537213025	0.0016382718360269	0.053008820675349	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28656932126367	1.55668345273989
Merged-chr14-17428019-4	8.02201548489779	0	1.36145462256375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62667803-4	7.41049927510502	0	1.35441416271474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17256570-4	14.6466412579768	-0.0565637205381089	0.471983336940591	-0.119842621785668	0.904607817928462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82775874903795	3.66794700372672
Merged-chr12-100837413-8	24.2439149063265	0.514255427649558	0.422163042376548	1.21814411975663	0.223169210364408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26809692846553	4.80957183247512
Merged-chr3-131868377-5	10.9500089431866	0.412233942061807	1.1077994599503	0.372119645265311	0.709803770170287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.02748994520012
Merged-chr14-121985621-7	21.3206811014573	-0.210124204770408	0.531939597928656	-0.395015158842509	0.692831700695263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61964800238735	2.89390671822632
Merged-chr15-86206626-4	11.84543855507	0	1.35524405423714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100492127-1	2.03802114141849	0	1.40227333371932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4333561-1	1.8686200835332	0	1.51631179430282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72152821-3	20.7086085132453	0	1.36281923672858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83673652-2	6.03314122376994	-3.05154736337714	1.16754732272766	-2.61363912534871	0.00895836025333827	0.186670927966948	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46168672155135	0
Merged-chr6-128736319-3	8.30912772511309	-1.47487116326727	0.813141070801602	-1.81379494435489	0.0697093011551533	0.730261688474268	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49651005769111	2.28521175839365
Merged-chr3-105850311-2	8.59105156527094	0.116971032001121	0.723585711597352	0.161654701200362	0.871577778443394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71402822234174	3.95907962497849
Merged-chr10-67648384-4	10.5334247286317	0	1.3553482110627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102853509-2	4.82349257062218	0.0698700098515322	1.13314308939389	0.0616603591422023	0.950833308691606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75624551133882	1.81033887371641
Merged-chr15-101275853-1	2.61792792967634	0	1.41063365906739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40183091-1	2.24597841699849	0	1.44569272347554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-14628362-1	4.51390064106671	0	1.37957680442765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122139963-3	4.43573509935271	0	1.39817772067459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-83747629-4	5.58128250261471	0	1.38377298923882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123353387-1	4.33199610707671	-0.295352778991871	0.935625195339416	-0.315674246977419	0.752249775842929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69445371395831	2.00174624381806
Merged-chr8-13660993-3	3.5070871513843	0	1.41157286041326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16162128-1	5.31627694901905	-0.404540681338061	0.954944198753565	-0.423627560506766	0.671837452341815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90896656829731	1.70266130792036
Merged-chr1-185230088-2	2.12595705868741	0	1.69042579541603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17844772-1	1.80851154719866	0	1.66441290799368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101760473-3	11.7992096929069	0.62935369145015	0.584494015162371	1.07674959045614	0.281592151272128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76517605948721	3.18555315328735
Merged-chr5-114596842-4	9.0993360519276	0	1.3557336722854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132719675-2	3.09702268988468	0	1.43639632638844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76646176-4	7.45347826887889	0	1.36134912035254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103337276-1	3.00988405015182	0	1.41549158030184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60977516-1	2.33692422414823	0	1.51246916434672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50449783-6	15.0864059307175	0.80545780736431	0.461749233844108	1.7443619790309	0.0810959904365047	0.80107158715936	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52058792292337	4.27664258677647
Merged-chr19-44474370-6	19.7649443048981	-0.212606213389139	0.427641734491742	-0.497159646127206	0.619076475824067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02264917147346	3.50195921857067
Merged-chr8-68191942-6	16.1420312613259	0.262844012855345	0.52297599339487	0.502592884138157	0.615250533257806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14348572890932	3.35865360983395
Merged-chr6-70875380-4	7.11745059037851	0	1.35500168672292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-64942006-4	10.5495818620383	0	1.36580851111732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58344118-8	22.5084808891875	-0.878092296696593	0.427064111398132	-2.05611352783046	0.0397715746029539	0.505599397530864	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48039140765799	4.50760447209895
Merged-chr7-31082977-2	7.31096953022554	-1.45477822734379	1.15972105092222	-1.25442081627037	0.209689090297098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.55634759613363
Merged-chr1-144204918-3	4.83836253715097	0	1.39782832474348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67644388-4	9.65735546866963	0	1.35473395144477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78753662-6	20.1589920415257	-2.38143368708091	0.525081618489391	-4.53535908175965	5.75055633023595e-06	0.000560205181998738	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96972330521924	2.76419629206891
Merged-chr2-128122592-2	3.49396140369558	0	1.39087940771319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135267771-4	8.07211047755908	0	1.34814587871543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44735976-4	5.16949027872651	0	1.38452943503738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65937175-3	4.42733223254144	0	1.36985225830337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60217779-1	3.21796878054096	0	1.37637340702315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17762427-3	13.213630783167	1.4273062437235	0.656470357106397	2.17421278550156	0.0296891586196282	0.420279420157388	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9699838995169	3.57861825774224
Merged-chr17-49423069-7	22.7613960891775	-0.084701641345553	0.436614257227991	-0.193996508229743	0.846178615996374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03079097186475	4.06231000924881
Merged-chr16-55853075-3	5.65277814650891	0	1.37065703153628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90431168-7	44.8253132901887	0.366397853683328	0.349674897567285	1.04782429688944	0.294719566007812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01841332917361	4.45625308955101
Merged-chr14-40975350-3	6.2935130161058	0	1.35930655329042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102691213-3	7.1076543940826	0	1.35953293377249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142910393-3	5.23754355160141	0	1.37750703025753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56726186-2	4.67051264951282	0	1.37492697093837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75726477-1	3.41905454085012	0	1.4222073557529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72412875-2	3.42790709614016	0	1.44521279424675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94296594-3	4.9710896244407	0	1.39210453844533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94492159-4	14.3298673868063	-1.46930756856534	0.489732827262335	-3.00022274753143	0.00269782235622067	0.0781304877260519	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50361728241005	3.01006194019959
Merged-chr18-75494913-12	60.1405972776858	0.117774589868627	0.246877269182067	0.477057244916988	0.633321358860863	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59954197286849	5.69978037571193
Merged-chr9-120691795-2	2.81335934245945	0	1.43844275327119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18680257-3	4.37620525943493	0	1.45154576925757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-56063218-1	3.95163028853004	0	1.38660593578147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57853155-1	5.39800251552801	0.3125478168713	0.970369312031741	0.32209161295187	0.747383291899113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25127403271157	2.38454896548347
Merged-chr19-28664039-3	4.35761469923416	0	1.39464278689236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29597345-1	6.30438563951675	0.0483557182599208	0.780685026399069	0.0619401123689573	0.950610523756156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90896656829731	1.52198329379458
Merged-chr8-11016717-3	5.54944324948504	0	1.40054573145494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184235764-3	4.4530037123285	0	1.38143214364132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124711583-2	4.91247803679939	0	1.37939603260685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69177271-3	7.09853305697742	0	1.34811450333725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83737798-5	28.5834496569404	-0.23347328021334	0.34120130200378	-0.684268432864167	0.49380567651641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14753792174188	4.91065244020883
Merged-chr10-19548213-4	8.13758117344143	0	1.35629557628704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156264157-7	20.5226648724058	0.459976523121581	0.608921233238307	0.755395768801455	0.450011551249925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137280208315	2.47061031207273
Merged-chr4-84545348-3	6.94323546249931	0	1.35856263299742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40949432-3	5.37821453746027	0	1.37661977704444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139199278-7	29.4719041801234	-0.182316107375361	0.348658785563673	-0.522906964987594	0.60103899746373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18633286580627	4.8796581891835
Merged-chr1-161463924-7	21.8037010080252	-1.25573171012756	0.356549685093134	-3.52189824483944	0.000428468571020636	0.0192807310034029	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18846285996699	4.11444429876497
Merged-chr8-35159539-3	15.7182345753386	0.669925143215115	0.486710440788507	1.37643470752299	0.168687088768029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93952871444968	4.61879678952402
Merged-chr19-42156377-3	3.77346307149135	0	1.40884945481516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-45344480-3	4.76195897175892	0	1.38371137941659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74960533-3	6.8447660197504	-1.13950089196594	0.851799426122739	-1.33775729006155	0.1809755686891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70275322934241	1.45224061799255
Merged-chr10-20769712-7	23.3370784746858	0.407797336240409	0.528501071330228	0.77161118181651	0.440344749549003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43364782874133	3.62328805116383
Merged-chr6-57529502-2	2.39902058465838	0	1.65845574671542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79433151-4	9.1041357068706	0	1.35708142655827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3450224-2	2.2180266427595	0	1.64679314060048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20054085-2	7.23287724243113	0	1.39515745992923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53423594-3	7.75885430414825	0	1.35971933622292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180199674-2	4.82221936557402	0	1.39701301422045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156442095-4	17.9223585237405	2.55969611848729	0.67257974591926	3.80578828609949	0.00014135326028579	0.00781670587576321	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	4.02830657262742
Merged-chr6-135371302-2	5.21977155777865	-3.09494288300692	1.20813804226065	-2.56174607101662	0.0104147433974628	0.206618626402439	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77802408088656	0
Merged-chr2-84358817-2	5.64497410745788	0	1.38824438854355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38010598-7	38.6582027621878	-0.68255189778328	0.300869524125707	-2.26859765796053	0.0232928041733996	0.357676141825375	C57BL6J_F1_Control-BALBCJ_F1_Control	6.22707747549049	5.56057911385566
Merged-chr2-131509988-4	11.2080298439106	0	1.35881096130783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64883282-6	17.8006091816704	-0.46258726204124	0.650849905608209	-0.710743380394224	0.477243272381554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70924337488271	2.35532669962609
Merged-chr9-104408697-9	46.506842659917	-1.06958776853125	0.251423666116333	-4.25412525818615	2.09867804506569e-05	0.00163910976798457	C57BL6J_F1_Control-BALBCJ_F1_Control	6.68960332634309	5.64876924416923
Merged-chr6-87255820-6	18.0484192435926	0.571038226137472	0.715705765920131	0.797867298726217	0.424947502025652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.988408630094828
Merged-chr17-78245072-2	5.20882790972645	0	1.36729422417989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62808833-4	10.88125000502	0	1.3479541577904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52319326-6	15.3036339283883	-0.641333199171469	0.608539157823839	-1.05388978001827	0.291933382482449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99256137960375	3.11650606450529
Merged-chr8-108783377-4	6.94106329811965	0	1.36704187253751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46994447-4	7.42578439942931	2.43908694514006	1.17137894556399	2.0822356030701	0.0373209547330286	0.48592330019945	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14143228603163
Merged-chr8-94485481-3	13.3424262261692	-0.270423739176613	0.547463270583419	-0.493957775264866	0.621336000318984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37522599479834	2.71924508138375
Merged-chr4-139490863-7	20.5528867469253	-0.169805009197288	0.404136659109683	-0.420167300762494	0.674363240543573	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54557514475571	4.48864707640953
Merged-chr10-14460012-4	7.13973391371303	0	1.39571205293872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35707090-5	22.2989945017896	1.5456910415577	0.406339781838037	3.80393727280633	0.00014241425691248	0.00785141642140516	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8185216861781	5.04840795411699
Merged-chr2-68368006-2	3.61399379194456	0	1.4165577583558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92098900-3	3.49196214498879	0	1.40904842104352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122491771-4	6.20301856434926	0	1.37305494397165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84935712-4	6.90108769928542	0	1.35449207071856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46074111-4	10.4848195007082	0	1.34342118735606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25285602-3	5.24776359706682	0	1.418741487936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47320156-3	5.20944373397752	0	1.42404071329347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120131327-4	5.5544980878301	0	1.38707407684862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45623975-7	28.3790391062428	-0.694020890290166	0.377004026758596	-1.84088455568291	0.0656384781343194	0.705007317309517	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77200225128965	4.90803622882617
Merged-chr18-38233536-4	7.17013545433264	0	1.35518688264634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107094764-4	6.9250137972381	0	1.35996024387331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50438557-6	11.6293404450012	-1.51823648903136	0.91825038081842	-1.65340142595769	0.0982491928557868	0.90111468233612	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75122680664397	1.02748994520012
Merged-chr5-64676384-3	9.78048937698004	0	1.35610508897791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65671135-5	17.7884475960906	-0.524774207419895	0.512816162147139	-1.0233183861107	0.306157333319165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98784304246239	4.44940124927553
Merged-chr17-5784926-2	2.72632460652622	0	1.49549771813714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94492601-3	16.1876145557105	0.383243518706356	0.477930742077194	0.801880868848684	0.422621873628842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68075726148466	3.74712248393951
Merged-chr16-45758898-5	19.6199620178967	1.1207504586766	0.657590311610092	1.70432933528548	0.0883195774483227	0.84134254862758	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88854826306555	3.57220526249175
Merged-chr11-46829925-3	7.06679435337506	-2.09064288336022	1.16911447025185	-1.78822770272431	0.0737392785565646	0.756586153842261	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59982791176663	0.41385117919798
Merged-chr10-88741621-2	5.22475317560619	0	1.40578466842002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116053499-4	6.09049051161965	0	1.37688389943439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34366706-5	20.5712555267996	1.73882431715239	0.405874600274805	4.28414174224031	1.83445940485805e-05	0.00146002018724273	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67668267545141	5.63004473468815
Merged-chr10-82969758-4	16.0702434794513	-1.43860148645215	0.508475075014847	-2.82924681492036	0.0046657700976628	0.117180738609005	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5417503628515	2.65203471064005
Merged-chr12-17713030-11	48.6807710762169	-0.35089729282823	0.309232396207246	-1.13473651898057	0.256485731279937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47197439608329	5.21298019097896
Merged-chr14-62328590-4	7.02346872719513	0	1.35237806956773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146821364-1	4.76491163169947	-1.38144354507992	1.08408981498326	-1.2742888328872	0.202561072658757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92954417814436	1.02748994520012
Merged-chr11-109380840-4	5.61017020371206	0	1.37213562167083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116449768-3	10.7484684782358	2.85577768978685	1.19947461193236	2.38085713643091	0.017272409144393	0.292313477173119	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.38572824442771
Merged-chr2-167770520-2	7.68374255351305	0	1.38864150630821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123609998-2	4.04306287339738	0	1.38588056347473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85169589-4	9.92069317821696	0	1.3548935654641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42299641-2	3.91751443038279	0	1.40790900090602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86655821-4	6.61420396794819	0	1.37182612690798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59907254-4	11.2178897286218	1.90314779334564	0.958149586407395	1.98627418969259	0.0470028869248793	0.565647538266441	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.7618556431244
Merged-chr4-133570332-3	13.8219024219684	-1.60145320288888	0.499993564103027	-3.20294763345972	0.00136028713742215	0.0459564005612995	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27051159711148	3.03878193165035
Merged-chr12-40520035-3	5.92400344240003	0	1.35098597538516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145804809-4	15.6822733337155	0	1.38742899488666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25394794-2	5.54011578969069	0	1.38377539892902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27675804-4	7.61161196133989	0	1.36892084700771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93755473-6	23.0601147256569	-0.331084888965559	0.607609743119127	-0.544897267884408	0.5858241754409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05750724623645	2.34377460879188
Merged-chr8-90877317-13	57.0524451609201	-0.629059499176639	0.260974449345165	-2.41042562118656	0.0159339198904703	0.277079958837516	C57BL6J_F1_Control-BALBCJ_F1_Control	6.04528657395106	5.53892232215682
Merged-chr10-98619347-3	6.5290232790567	0	1.39203640342718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88832116-2	4.39393918788952	0	1.38041199588867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-40439863-3	8.59750396442329	0	1.38027568083985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-194992719-4	9.88483562686117	0	1.36784006878184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8831989-2	3.9272147414771	0	1.42249545358672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58930137-1	1.58894522335957	0	1.58180253944192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13212148-2	3.5093625337724	0	1.38706177969529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63249490-1	3.12617155705299	0	1.39897456314239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113391144-4	7.00311412821711	0	1.35142653354803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167230333-1	3.14072365993776	0	1.40092491600166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62301290-2	2.00849550564987	0	1.49914050741601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24963957-1	2.78353341509047	0	1.39441214467175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25496817-3	4.36981545538626	0	1.45386225150633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-133960862-4	8.83437530072139	-1.59184988230274	0.694764406891777	-2.2912081656922	0.0219513769164585	0.342397388178413	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23946554605482	1.66683653681755
Merged-chr16-89884100-1	2.26227443577133	0	1.44265466776743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181138910-3	6.55240808795841	0	1.38155768466905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51603909-2	2.81880836057059	0	1.48989393284047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121374601-4	13.5468323832289	0	1.34483478455281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52257352-3	15.4147992910099	1.01781039204833	0.620651107371466	1.63990747774363	0.101024405837993	0.916333335048802	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18210741161866	3.51479190712032
Merged-chr1-155058738-2	3.86508033526561	0	1.40848268115042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69548000-2	2.71356333977686	0	2.12699588675817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99488256-1	2.63567290362854	0	1.40901713455687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32070516-1	1.33891852150275	0	1.64257659132467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76377332-4	5.54365442323453	0	1.37278746370638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-50705111-1	1.72666369336293	0	1.52309321592435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58301171-7	26.1667309775583	-0.603804035249303	0.404148602930932	-1.49401490162392	0.135171724447881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07593248598185	4.22956954180265
Merged-chr14-30763082-6	17.3206744681511	-0.203057256563951	0.491082974297434	-0.413488691711323	0.679248605843092	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53967265858111	3.26127303731713
Merged-chr9-103092380-3	8.14089546226015	0	1.34802980201803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100421960-4	10.0889072405023	0	1.3593111316858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58685791-4	6.86961237598556	0	1.37721022928401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86685425-5	16.9819789415182	1.17820246767158	0.424798269348979	2.77355759823887	0.00554470239750686	0.133482939604108	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94614781226369	5.18169377974195
Merged-chr6-137365865-3	7.11765006482267	-0.0356618610723599	1.39581832435933	-0.0255490707135748	0.979617008475553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr2-122450517-6	31.7196791158331	0.0288717391077814	0.463095380370389	0.0623451244205663	0.950287994253951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3632336662134	3.23535663341048
Merged-chr11-74827203-7	26.6646164645857	-0.00248526841864735	0.42760388092668	-0.00581208106264475	0.995362656362462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65939163378389	3.57771808106934
Merged-chr6-87189922-8	43.6379775548642	0.030526002959464	0.449810918603543	0.0678640773199398	0.945893834945363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79475430992963	3.91944679701099
Merged-chr11-100730697-4	5.91659550203657	0	1.4184195610065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62888143-9	38.0847855024061	0.852847224101732	0.357185975004645	2.38768396236902	0.0169549148527044	0.288738163057067	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55175039603072	5.45692988081957
Merged-chr17-84922144-3	7.24281644451841	0	1.36917337382735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123568340-3	7.86627963994224	3.19424751619373	0.892636050342549	3.57844332521406	0.000345646799241241	0.0162816415597527	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	4.89963330847963
Merged-chr16-89707680-4	6.77576875970997	0	1.35428600105403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11451654-3	7.26697657311802	0	1.3616427407096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6967809-7	25.4130628529732	-1.57022744429814	0.404280897882081	-3.88400108074396	0.000102751450117575	0.00601882120360049	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66902165510941	4.12440085119015
Merged-chr9-57433491-4	6.00048630414946	0	1.37079582141095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134342761-4	7.78573775525587	0	1.35513232400516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29396363-5	12.5262613554889	-0.521503409266234	0.641986468778671	-0.812327727496115	0.416603604406008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16820389295307	2.40366870030388
Merged-chr19-11928292-5	17.1429029963377	-0.0370972297234535	0.575667620574538	-0.0644420988737026	0.948618209615434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00140563128196	2.9670669471077
Merged-chr2-109959338-5	15.6689903181865	3.37491687908076	1.02707698001755	3.28594345384226	0.00101641411915855	0.0363394608502385	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.9728339234462
Merged-chr12-8829835-3	10.09949506197	-0.0365566658517713	0.811103895120585	-0.0450702629733229	0.964051304036484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71756895783173	1.69437084825241
Merged-chr4-43466783-10	29.200328163902	-0.866859938565671	0.380431899355164	-2.27862053638249	0.0226896320889499	0.351542111962174	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74641076252477	3.93196350828481
Merged-chr14-118820225-1	3.9376821734869	2.44796933558493	1.22483669410467	1.99860875116446	0.0456507027873139	0.555136639990709	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.44257280273123
Merged-chr17-64873926-1	3.1661525821397	0	1.42273477693001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43518882-2	4.93314185183957	0	1.36884168224608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104948172-3	4.65582275485347	0	1.37403662085454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77485071-4	10.5609528663793	0	1.35136517188114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102395760-3	6.73789193973558	0	1.43216840040611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97630705-3	4.78763641108086	0	1.37595833561846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80245075-3	6.04489794638582	0	1.36530468484465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-92818201-9	42.8012228545523	0.00613927356716264	0.327002977558684	0.0187743659491935	0.985021103227753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36578801466316	5.68548192701945
Merged-chr9-3000428-2	5.69724962864981	0	1.45621214423985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103543528-3	8.07418209175179	0	1.3560047550193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135237553-1	4.77136665765973	-1.90581133447512	1.12853565600196	-1.68874711608741	0.0912679022421788	0.858175039844829	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93240648380835	0.600815099743027
Merged-chr11-83969249-1	2.94899147743205	0	1.41357141534981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138023684-3	12.9803897886286	-1.30238810744149	0.68309329199181	-1.90660356749207	0.056571942782458	0.642137030217506	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90111608161007	2.77591134697753
Merged-chr9-14698061-3	5.60929264599858	0	1.3679985496834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64224953-3	7.52110715703241	0	1.37997256910693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65741396-2	3.2073247819146	0	1.39969941606658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140350112-2	6.29997552975748	0	1.36369201068685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63683280-4	6.94580105843651	0	1.36050692155448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78063337-4	6.51082804151367	0	1.36104385430959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150060184-6	20.1277825063076	-1.58060841589059	0.679158494411319	-2.32730419908924	0.0199490804479056	0.319649406780951	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01201003102463	2.02381448491872
Merged-chr14-102995383-3	6.48741913146827	0	1.35216373285897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83271645-3	5.54211948531333	0	1.35765242898381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23114432-5	16.5355269238751	0.646459229687425	0.514156720520975	1.25731942010287	0.208637994583796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63009140624308	3.72469214043688
Merged-chr6-145187691-7	19.0141636491983	2.01800849886188	0.493248828606442	4.09125857341271	4.29038438670638e-05	0.00291162303217194	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82610300771204	5.15115912227518
Merged-chr8-40703133-2	4.86943065415125	0	1.40172299772705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164924684-8	21.0685882679808	-0.735952224263163	0.411862277487324	-1.78688912408545	0.0739554106756888	0.757802482359994	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07908661032673	4.11839119151632
Merged-chr5-120891276-4	5.99681333394838	0	1.3754684834682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79168151-2	6.01719074966891	0	1.40302797377667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30671672-6	16.8470235094557	-0.197292914262639	0.475834151269312	-0.414625376796411	0.678416168068097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69652343584727	3.44878679852317
Merged-chr7-128058794-4	5.12149991052878	0	1.37562096177242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46174089-2	5.48816864523093	-1.32254537611129	0.975591698691847	-1.35563410172992	0.175215615962227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64109723835872	0.765562747387088
Merged-chr7-47122241-2	4.80992028750472	0	1.36983089278103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50779162-1	2.7837898842713	0.0583843224420667	1.38347351084155	0.0422012579095587	0.966338259788487	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.601513806634888
Merged-chr3-121766206-1	1.99635200616064	0	1.50220256522224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13016770-3	5.3404805893765	0	1.36550173007837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116829483-1	2.80707898978297	0.0596963566862824	1.38711841146296	0.043036236988104	0.965672647661852	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	0.67591700901439
Merged-chr15-58344790-2	7.29871110180919	-1.7486651151872	1.23406905044617	-1.41699130575796	0.156485469422518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	0.303163067301871
Merged-chr7-68059934-2	4.05204053119753	0	1.42465223770225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3652066-2	3.55082376700424	0	1.42469502589848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70777368-3	6.41464063369789	0	1.37398240501979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49601346-1	2.84987760776883	0	1.40352952221667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96484996-1	2.84352095274067	-1.36341421774195	1.18457060145827	-1.15097759142723	0.249741454523607	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00259395741298	1.02748994520012
Merged-chr3-95509025-1	3.44609410337853	0	1.37976767535521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26883976-2	3.47374895376837	0	1.43729473323555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3545099-7	40.3719864281599	1.22575839989646	0.443446558861132	2.7641626153205	0.00570690904323954	0.135883429120218	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69386385409585	4.40420939292593
Merged-chr13-95799061-5	15.2861701808017	0.989349439177565	0.458233030565363	2.15905308693465	0.0308460486291986	0.430490464039693	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53970108753211	4.37688558475877
Merged-chr9-40841486-1	7.42243555625763	0.871832318089822	0.905429657051091	0.962893485209339	0.335600979289862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.88925557974982
Merged-chr12-117558133-5	14.2004402408525	-0.80077832250141	0.553987011123945	-1.44548212579347	0.148322510075588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52529140235815	2.75034409124416
Merged-chr6-146438230-4	15.5905768913049	0.142099560738796	0.545017290510983	0.260724867289201	0.794304687814654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25073256846474	3.63291064301267
Merged-chr13-37958681-8	54.3704967138939	0.42356584001225	0.321630592535314	1.31693268564228	0.18786118915666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77748596133251	5.16935007297376
Merged-chr11-73131248-4	8.89974953633381	0	1.36462719162623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126537536-4	8.50397552521031	0	1.34548929335239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76690479-7	18.91174994841	-1.82219415183168	0.559436524832537	-3.25719553684333	0.00112518893658282	0.0393085767376	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11893991793823	2.2881631765938
Merged-chr14-54351221-2	9.37340041518162	2.39199416453372	0.565205170177281	4.23208118174759	2.31538799513502e-05	0.00176277557461547	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11480110409737	4.81519866383315
Merged-chr6-97235160-1	1.69160975093601	0	1.6329955227653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115099703-1	3.04187641854663	0	1.38968878030907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160288103-1	2.64269892420296	0	1.43269507344143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133666280-3	12.6368743277745	-0.924651283595054	0.494585836955392	-1.86954662771399	0.061546802830886	0.677800375827418	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35845088787205	3.5288836047217
Merged-chr10-39386398-3	7.14254086349067	0	1.35336350517857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-54024824-3	4.7682397276368	0	1.38583102425241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25225002-4	7.30296022972443	0	1.360767867069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95416877-4	15.7565913474689	0	1.37192212287512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7217187-4	6.68418793883177	0	1.35526709818178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20645428-4	7.57573867024872	0	1.35535066131705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-62826379-2	3.75326421755927	0	1.37193751996328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77688952-7	18.9611970334453	-0.326246005529524	0.449394111677454	-0.725968580922756	0.467858031841656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27562360484881	4.95545810392686
Merged-chr10-93049636-3	8.82699869397013	1.92782962984843	0.774802663564667	2.48815565627896	0.0128407518332789	0.239701383552612	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	3.48767937560998
Merged-chr5-77357882-4	7.34977312607423	0	1.35517417070178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130900436-2	6.52532224136096	0	1.36142928049919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143044725-5	15.5040556935007	-1.42191450247746	0.578324991763902	-2.45867725366769	0.0139449918533062	0.254112300977524	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06646209889016	1.8534679828657
Merged-chr17-32143372-3	6.26337334850758	0	1.35307984436048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123940234-3	7.26336594574644	0	1.38773515721791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18925779-1	5.71646397495284	-0.574231328903828	0.742811740625471	-0.773050959615026	0.439492222408359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70924337488271	2.34876946313508
Merged-chr9-41068014-7	25.1892671294833	0.0816145800307995	0.372030790919574	0.219375874316927	0.826357261818308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77626724407839	5.0296200679342
Merged-chr6-17629958-3	5.75180043527821	0	1.38915709620794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51224184-2	5.14471796486342	0	1.40314834528842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117069873-2	3.64983656453614	0	1.40197793409738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16050365-4	11.7111740620771	4.12959033335999	1.04922306323403	3.93585547064826	8.29008556514258e-05	0.00502386578857955	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.61175409194645
Merged-chr4-9060360-4	6.75811725931469	0	1.37639971230557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86507978-5	17.9520742490265	0.224763799535788	0.588136288554157	0.382162780821322	0.702340626962256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99842317083879	3.24674846141715
Merged-chr8-41394599-3	14.0690052769819	-2.1313734514856	0.673066545845415	-3.16666080737747	0.00154200063489772	0.0505863684444207	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37828864821693	3.05010687055311
Merged-chr4-149800264-1	5.62317068237905	1.86889886854659	1.0444097052954	1.78943077517456	0.0735454667351173	0.755453141771399	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.09906462022006
Merged-chr2-131166015-6	27.3128578140396	0.319037663552175	0.467647053919525	0.682218910347454	0.495100538928461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66055306184606	4.11107150580992
Merged-chr4-139238774-6	17.3919361836387	-0.399090958645535	0.478999878729031	-0.833175489948924	0.404745763629299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6828536569949	4.47459752856998
Merged-chr14-54376089-7	16.1320991490669	-0.307498056929412	0.464149362684615	-0.662498069911935	0.507652071374177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78266359850593	3.53877125022579
Merged-chr6-5174583-4	10.9889815498869	0.52839394750069	1.09864178164163	0.480951986653143	0.630550623328839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.730937814817307
Merged-chr6-145792599-2	5.30923076685652	0	1.41085125635061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150216096-4	9.61949888142186	3.32968101129911	1.18340138579718	2.8136531283983	0.00489820509358701	0.121414286676834	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.67279875369265
Merged-chr12-30282753-3	15.7746403282071	-2.06412145615646	0.509517387626959	-4.05113055271767	5.09707567124743e-05	0.00336660919092757	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64465502793333	3.62577662346382
Merged-chr12-80785242-4	8.33350379563725	0	1.35101059554445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155187382-8	36.6232317009863	0.132022295933591	0.319043835570176	0.413806133247016	0.679016091895057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6689912478332	4.85679222845374
Merged-chr14-79394719-3	7.01795750745882	0	1.36250868004427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85458572-4	10.2601013106819	3.26317701789145	0.980630916508381	3.32763016437445	0.000875880604312419	0.0324043705248735	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	3.39423714633969
Merged-chr5-130455330-2	3.83479597796562	0	1.37575201304499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80846934-3	7.04574329176794	0	1.36178745338837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109685502-1	5.10738119361415	1.13219678273944	0.777101560507844	1.45694828099372	0.145130657180785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	3.15031454387783
Merged-chr15-38691455-4	8.07861271092116	0	1.37341399013908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-131861513-2	5.19992999563405	0	1.3549534968664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110556386-1	2.87111508184735	0	1.42669479859517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85162975-7	15.9181992937179	-0.121807894625191	0.481120616281301	-0.25317537952681	0.800132691154053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34171170443485	4.24172417219528
Merged-chr10-44626116-1	6.94739317008643	0	1.37925044726549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142489736-1	6.14955033423007	-0.48457201163303	0.760560144599139	-0.637125170276216	0.524043314556144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69949452834228	1.84097322471749
Merged-chr2-167007806-3	8.02815139207715	0	1.35767301378621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30810290-1	2.33900406071982	0	1.40878802268837	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20467269-1	2.90152265066356	0	1.41596115360921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100526141-1	2.1717310588706	0	1.45568905531101	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162521302-1	5.05371049182903	4.44595489548437	1.10716259476279	4.01562960717339	5.92873060196035e-05	0.00380047012726371	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.77119658996144
Merged-chr9-114975924-1	2.9352636938434	-0.503218107476003	1.21613188792946	-0.41378580108837	0.679030983518927	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79958479173889	2.1304360554358
Merged-chr10-31557381-1	3.5966321940717	0	1.39474032830846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13834590-2	2.35619182187415	0	1.6922690900037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87750536-6	21.7916769246049	-1.22006639749951	0.610290379003758	-1.99915718725757	0.0455913491809573	0.554553625000595	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00192300798013	2.41420516037489
Merged-chr4-53151149-1	2.49375978976268	0	1.41916894010055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52764697-1	3.06130433558438	0.677566972923997	1.14087758243616	0.593899804286768	0.552579129940208	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.88866493597531
Merged-chr3-8959076-2	3.33034213384922	0	1.46138678221838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5293886-4	6.30391613355421	0	1.37180716769167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42122969-1	1.93747894880504	0	1.49127574577507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5269351-1	3.13317313661494	-2.27386703741121	1.21449101321976	-1.87227983794044	0.0611678986441381	0.674887102601789	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	0.303163067301871
Merged-chr5-143049395-1	2.3565451227496	0	1.50320277571334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152688179-3	4.79144061638096	0	1.38600634700856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131105702-2	9.8644518044285	0.45189116474264	0.778360186899363	0.580568189828376	0.561531516517919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58321107267933	2.44306101831552
Merged-chr1-166300019-2	3.24227988100143	0	1.37275113165853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38427211-1	1.66019861770699	0	1.82486982975414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89299151-1	1.04282746263021	0	1.73480440826966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5401570-4	6.2466194479134	-0.319166933393431	0.990582373345219	-0.322201304991525	0.747300195923175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.97908007631626
Merged-chrY-90811926-1	4.86019263600583	0	1.75445155826864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13244476-4	12.8204312585729	0	1.41836743366055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122923130-7	29.1928826646785	0.826134927699094	0.392581586022439	2.10436494505342	0.0353466248297272	0.471274997107984	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31359636782255	5.13352631857179
Merged-chr19-55683919-6	24.138457217121	0.0969386031584523	0.34005919945076	0.285063904505512	0.775595183233696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59449706186724	4.79496333636372
Merged-chr1-36612713-3	6.27854565895116	0	1.36658721345933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119300327-4	7.93239415185284	-0.696580909301226	1.35867823095762	-0.512690122966247	0.608168099859017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr15-62096864-4	9.95111939279358	0	1.34620620484304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105339162-2	4.83508296680773	0	1.36257900686469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79611228-7	20.4094458124628	0.144612269738535	0.393634181816186	0.367377317364334	0.713337588627287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04453263204579	4.26545030187744
Merged-chr2-79087395-4	9.73314340161304	0	1.35843285940417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101092826-4	9.24356346045902	-0.365567979187146	0.673007391786929	-0.543185682131235	0.587001963649372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05637383168099	2.14874982292893
Merged-chr3-15876912-3	13.2842505466813	-3.09388679986601	0.876690686598395	-3.52905174785242	0.000417051570839003	0.0188932601045749	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71071768277815	0.67591700901439
Merged-chr1-138131278-3	5.93619797072856	0	1.37955225268495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125995046-4	8.33592782862315	0	1.36412651131166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141345024-3	7.20335404141721	0	1.39451692315411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5599161-2	5.05274967154341	0	1.48337086850285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150030799-4	12.1327122878513	0.371321134529406	0.715578686931567	0.518910276830137	0.603823310909062	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57074540165941	1.83878779687608
Merged-chr1-162665735-8	22.1090766615751	0.0251347714464464	0.400840169572739	0.0627052210691307	0.95000123976599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67770430892862	4.63489383828162
Merged-chr1-171442088-3	8.43244214704306	0.662086994029097	1.04461919265611	0.633807035792282	0.526206760970575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.14143228603163
Merged-chr17-26467739-6	16.2036673808478	-0.866247906723281	0.391175897513638	-2.21447157718372	0.0267963558252313	0.393894836750607	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94934053891799	4.06592242085198
Merged-chr9-40500855-3	8.969320579367	-2.13118756452555	0.82570414578831	-2.58105469785534	0.00984989740344734	0.199341240861502	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02626546409888	1.15716269587666
Merged-chr5-43102204-3	9.5320260137567	0	1.37276462062318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88242077-3	9.7581427894304	-2.45761946410107	0.544791449447611	-4.51111974424886	6.44863023388739e-06	0.000612834074971827	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73151000924109	2.54358964719623
Merged-chr5-74673005-4	11.8406215222033	-2.96905906487649	0.696328649864768	-4.26387606693061	2.00910907739155e-05	0.00157375660923833	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44171381539846	1.19182800327718
Merged-chr2-128711033-4	14.0674571935704	-1.62002453191226	0.694210442556185	-2.33362166945673	0.019615540907393	0.315935166869623	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02135477184709	2.07569703507273
Merged-chr5-93198358-4	11.2461266591786	0	1.36199080817493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35694848-4	12.2899677259613	0.797138045169163	0.564566762568434	1.41194646589302	0.157965724623534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2127521710923	3.29004491248602
Merged-chr13-56113833-1	6.85195477576303	-0.522713401257343	1.26727958005598	-0.412468889646477	0.679995778807717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.601513806634888
Merged-chr8-108827629-5	16.1465977585166	-0.129647730081451	0.541934437622824	-0.239231392362047	0.810926161688078	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31463781495015	3.4012126958644
Merged-chr13-49243571-3	7.07650360922066	0	1.37336335559843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-72166285-3	9.12354135147164	0	1.36969724046555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81127747-1	3.35012672909507	0	1.39180023150954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96620991-4	8.56031295611299	0	1.34765790159977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172078145-3	6.26772909642952	-1.29373876657512	1.338700174777	-0.966414131372347	0.333836995675968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr9-24899819-3	6.39067699555816	0	1.38513465567512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110970520-6	14.2637768667769	0	1.34770668702411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120120707-2	3.62484556551528	0	1.384819351235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111081026-2	5.50216994507462	0	1.49263408997678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92801809-2	4.83056449806352	0	1.43687232000681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120467198-4	6.2939162251227	0	1.35694259863403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88428306-4	8.12080146283644	-0.0411816203362685	0.841233500114996	-0.0489538520882003	0.960956072512323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16448544747254	2.13836773113792
Merged-chr9-123799987-4	6.11565360723407	0	1.36665446441284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9380936-4	6.59582587934375	0	1.36637985789163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26750158-2	5.52477452089613	0	1.36761763081639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89202373-2	10.9898314180212	-2.48666940732903	0.836414094503198	-2.97301231970036	0.00294892614771136	0.0839270557400219	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91464579990038	1.10056930386922
Merged-chr9-37245732-2	8.06785022020313	0	1.35808551872104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83615697-4	5.47574561172846	0	1.38320514337744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127526870-4	6.90965838572591	0	1.36107221159529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39553180-5	13.6549708818036	0	1.34552726376376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45326148-3	6.26270035366757	0	1.37199746316883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8985606-3	6.01691000614466	0	1.36949588268589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87634292-4	8.42846182852671	0	1.35219745115177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87908967-4	11.4627807189534	0	1.3718651427186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36101534-4	6.16767091784575	0	1.36944875152567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-85695357-2	5.12162506220344	2.45548103944783	1.23403298169924	1.9898017928716	0.046612773869025	0.563186943080629	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18909650862134
Merged-chr2-128770289-1	6.97501606504167	0.568929669072846	0.777148631366798	0.732073178939079	0.464123903339658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	3.0037596952608
Merged-chr1-90973440-4	6.79980099748218	0	1.35678722144846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5839988-2	5.74573257121161	0	1.40585221454953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69275520-2	3.13898197730856	0	1.4334112818785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16310535-2	2.19833762934387	0	1.55914659722933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59895375-2	2.99955018712909	0	1.47333108905699	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24303390-2	6.26044018666665	3.218422025607	1.12334239796316	2.86504099857944	0.0041695525511492	0.108550147091916	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.35612604634828
Merged-chr8-125727482-2	4.58120153838134	0	1.38482904562536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131917145-2	3.50375396991259	0	1.43710582484947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-48863406-1	1.6459436861987	0	1.55736461910942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99997494-2	2.87980923316501	0	1.41993371466014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88790438-2	3.37105487060036	0	1.40044203869815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55755631-2	6.53224023278011	0	1.39324866561906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57646228-2	2.22793464042642	0	1.62474148799423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5009862-4	11.1704112798014	0	1.35716371437842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54008969-8	25.7884973819754	0.771815069722488	0.513831858882332	1.50207710242279	0.13307719760761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44242388972463	4.39757171750106
Merged-chr3-126828055-4	11.2224499264714	0	1.401158655323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87522003-4	10.4416558158629	1.06913514985089	0.839226927613277	1.27395238960153	0.202680289803654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	2.13795322910058
Merged-chr13-42515145-3	5.03903441045985	0	1.38557098774957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34610675-4	16.6772904441789	-0.763086805956531	0.595383783755977	-1.28167213615157	0.199957683388706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49150090948888	2.22120332331928
Merged-chr1-46921736-6	31.9922115469794	-0.548702468803239	0.408588408809921	-1.34292225861576	0.179297148157083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29639668011389	3.4369160608593
Merged-chr17-84074204-3	6.90470917117391	0	1.3463175643881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69260158-3	5.93252804449572	0	1.35719959445809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22710883-4	6.01856362728557	0	1.36256210545753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9786799-4	6.50208748740862	0	1.38124747347218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22843035-4	10.0959355295085	0	1.38086877886242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88622288-4	5.80094558492782	0	1.36787629024448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75698241-9	44.9231727699197	-0.0417149951877426	0.29413832708935	-0.141821011904616	0.887221386725128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84444102389487	4.78946559259055
Merged-chr4-139265251-2	6.5139348421849	1.28275647382252	1.05654293368231	1.21410728606342	0.224706758080872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	1.94458379707259
Merged-chr1-80723508-3	8.08454297446331	0	1.39134281804623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61914023-3	4.94200675688816	0	1.44276531826131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93119115-6	18.7429864757609	0	1.34188112020555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100626367-3	5.38665541392115	0	1.43182390072515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105244805-1	2.63372038843613	0	1.56018068923781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63830903-4	6.93530835854926	-0.0856198727798713	0.775030651945551	-0.110472885898049	0.912034352150468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16454203713377	2.05860060485363
Merged-chr16-28935262-1	4.29825543395731	0	1.43671985566754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100145318-4	8.28922193495027	0	1.37085837583855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144312364-3	6.56306913407724	0	1.36881563930027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83093589-3	18.9882038418867	-0.0540036633678738	0.5769383314945	-0.0936038748335247	0.925423831459609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89990859594029	3.84518301783723
Merged-chr3-9850002-6	19.0911347708752	0.444848555288812	0.498360600883546	0.892623844060179	0.372058645766211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38900951003059	3.74715151139956
Merged-chr3-127527750-6	23.3745545278798	0.90989765671357	0.437599127799538	2.07929495035554	0.0375902489771472	0.488493508044166	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80446288426714	5.69759375463568
Merged-chr13-112666688-9	35.856549328366	-0.169711273992382	0.379681281814889	-0.446983515176614	0.654886962388499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15630615079366	4.05018176590284
Merged-chr4-109458337-2	4.03356113123455	0	1.38933382950963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75777121-8	46.6252050390454	1.38502870091161	0.568188459713505	2.43762202000719	0.0147842236931598	0.264360399913314	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30806904914164	3.13811757739455
Merged-chr10-51456629-4	7.92730926403693	0	1.35785099730257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57502397-11	89.9302159252554	-0.489266380630318	0.247587547718187	-1.97613484660068	0.0481395066660693	0.575250701881921	C57BL6J_F1_Control-BALBCJ_F1_Control	6.20421447662502	5.66044654254652
Merged-chr18-5101554-3	9.83104557533945	0	1.36967928383424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94879987-3	9.71254840068692	-2.54140314509675	1.03273467622772	-2.46084807995385	0.0138609044644493	0.253198485526151	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75392115242731	0.716426531808663
Merged-chr18-36691557-6	20.7038845555981	1.07700616896134	0.373626670665907	2.88257304287677	0.00394441674556238	0.104084732947585	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93919281433503	4.9710621805635
Merged-chr3-14893169-3	9.52808131164979	0	1.40885363035405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8736096-6	17.5593491274859	0.0818411442978706	0.590031144243068	0.138706482016067	0.889682095710898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91528692632208	3.60827860261217
Merged-chr9-59547270-4	5.6891643318252	0	1.39068231807666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14537340-3	5.23505991383006	0	1.42070180915617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58850714-1	3.10630423776592	0	1.38850961902179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105397647-4	5.76398019439406	0	1.36438728151311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88096911-2	3.61492335260745	0	1.37794761843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80320102-2	4.6595040125687	0	1.39226923998954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32541464-7	26.0899493346616	1.35436669213859	0.327236378954171	4.13880234363632	3.49123564378032e-05	0.00245511097490627	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07559320553224	5.38326815804645
Merged-chr17-52725370-4	5.76625868735779	0	1.36848394315222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99364692-5	15.4946949132016	-0.641461024751119	0.637516938435514	-1.00618663768414	0.314325798703438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70930074590981	2.67982390309017
Merged-chr14-44049731-2	4.66123481670542	0	1.37002457518809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108644751-4	6.00068873809145	0	1.35716727440019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110268674-3	6.72676831073312	0	1.36159036479869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74855611-4	8.33742614670387	0	1.36394503103603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71486355-16	58.1992846098702	0.582897834434191	0.263237462716348	2.21434224604381	0.0268052445692235	0.393918975273971	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35577919615152	5.97295389481187
Merged-chr7-35150102-4	15.5176627435886	0.3856559470174	0.431674582617168	0.893395077095424	0.371645638051476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69741472196892	4.04716493809164
Merged-chr8-46894528-3	5.85895880845429	0	1.3884688537539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75541770-3	4.07726549713753	0	1.40546514572361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31445654-1	3.42754550254526	0	1.3987282769377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9338283-2	7.8160061924058	-1.1458448783843	0.660696888445404	-1.73429737361172	0.08286533325541	0.811325045106418	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38969088807973	2.93121731748374
Merged-chr12-87375852-1	3.33127607525182	0	1.38111783313878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91636639-2	7.70373359903989	0.455378144878614	0.793474946871676	0.573903620617098	0.566033022868142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	2.05692240690225
Merged-chr15-38553660-3	5.71312528740958	0	1.35965271621551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113507154-1	2.91425697051011	0	1.49321037808756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10136565-2	3.00692463013467	0	1.44115301083698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61519313-1	2.32182686731759	0	1.58229926415355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6534049-1	2.9768458926973	0	1.40345907424176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19119067-1	2.10358029830735	1.84714248436854	1.38869225258047	1.33013090620775	0.183475144152314	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr7-82691629-4	6.3490036038334	0	1.39130555044205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171562910-1	1.6717763235012	0	1.47627166952888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48323278-4	6.17575329581445	0	1.35885269681521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154036953-2	6.52869908101814	0	1.36715566805473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32111333-1	2.50063246024075	0	1.49632504382829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84393491-2	6.81216371401082	-1.48325684018062	1.1938519543772	-1.24241270849567	0.214084329106789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26857811924232	0.71701424649985
Merged-chr9-45084697-3	9.07544519649861	0	1.35363931569359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88061148-1	1.21076930018501	0	1.75201086636942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157501465-6	38.0441731668309	0.22603487445319	0.693445762978966	0.325958981250631	0.744455389849394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69486619385668	2.28521175839365
Merged-chr19-47508087-1	7.51493354209501	0	1.36592218836157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98977517-2	5.14485796255725	0	1.36797949381135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119258213-1	2.09082705995816	0	1.48212135043225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191592494-2	3.26911500482563	0	1.44289740125758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50345356-4	8.84041443600906	0.870755818490504	1.03425265096373	0.841917898570647	0.399833910932856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.897114879832661
Merged-chr1-67044140-1	2.76835945077241	0	1.42327645778682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72764081-1	1.95859289844055	0	1.48163748588445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128305558-1	1.42524903292951	0	1.90486599736556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35571026-1	4.35296026260584	-3.45020828093494	1.14312639972984	-3.01822115362776	0.00254263277397088	0.0747512033316837	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	0
Merged-chr13-63113045-1	3.87607958334629	-0.695153888422823	1.37537219496141	-0.505429650947922	0.613257097473649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr18-38385097-5	16.9070794780262	0	1.3423362172428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32402763-2	2.14480360801538	0	1.49953997769056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10229313-3	4.47474391109183	0	1.40976240661932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71275925-3	6.46866709266336	0	1.35889833257875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17772689-1	3.66641051236334	0	1.39877135350936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31924176-1	2.9774675367801	0	1.58955888356905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15214708-1	1.58568996013829	0	1.6011549750775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-65496624-1	2.06866026620926	0	1.45623417824638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154902971-4	11.92566115838	0.610459938236994	1.34184087096809	0.454942125735497	0.649150875541189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.601513806634888
Merged-chr13-95503610-5	22.9352346033907	3.80702667946095	0.562005347057791	6.77400437449836	1.25265881842864e-11	5.67444005924687e-09	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88772579123251	5.89586951342007
Merged-chr7-109646694-4	7.53511207753763	0	1.36564178283957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20932785-4	10.4461921262515	0	1.35420858129497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77627712-4	6.6430654607709	0	1.36353171550949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41374763-3	7.01123634548238	-0.402222027908706	1.07421326664601	-0.374434053644259	0.708081411369505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.723581231604105
Merged-chr2-113431076-3	6.18331426608485	0	1.35461425638497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81125310-4	7.69284181510994	0	1.36489911488109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131103563-2	13.3900433759473	0.973270682693201	0.592178664551088	1.64354229720688	0.100270781513839	0.912719902304248	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44181999537264	3.22005288408861
Merged-chr3-109451612-8	21.4573667271067	0.173340150688069	0.349481767941266	0.495991970365678	0.6199000761421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87648470256751	5.08941633015812
Merged-chr5-105800386-6	21.2188744618461	-0.848008182768868	0.585005420042141	-1.44957320687351	0.147177572064576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76998571571298	3.06975861641795
Merged-chr10-56174016-3	5.60641652171627	0	1.3976436708144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122131823-4	9.87073791417918	0	1.34987723301233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115486913-2	6.26466312144903	0	1.37196733950815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68475423-3	4.14952842385743	0	1.37975904295627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34043328-8	19.7077379216707	-0.0046651855724373	0.435347151761777	-0.010716012620177	0.991450022613793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7169525684095	3.51237653963946
Merged-chr18-62092767-5	12.684807356975	-4.16010321238085	1.01805414324697	-4.08632806022739	4.38253991887249e-05	0.00296675575902851	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52529140235815	0.303163067301871
Merged-chr4-8857638-5	14.2319205782337	-0.0967716136180232	0.898047043207455	-0.10775784448039	0.914187783337096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	1.55482458121103
Merged-chr16-52056339-4	6.91574900705804	0	1.37227416069193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46991296-4	6.20561150901729	0	1.35274501978233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100031672-3	6.3646470636716	0	1.39593753313653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75929144-3	11.8238031160975	-1.65990297537544	0.649628294367012	-2.55515806464807	0.0106139587159949	0.209272463490304	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20614753824208	3.55654894618274
Merged-chr11-63230952-3	4.90443342370575	0	1.38649041980979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99674344-1	2.98068265528883	0	1.44611212563478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112298819-1	3.71069515802473	0	1.42178010658162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22962925-2	7.73860234386574	-0.474652566183581	0.666970050601868	-0.711654992237296	0.476678444653957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57804496846817	2.74246539333791
Merged-chr6-145193644-8	26.4722036880323	0.0858000027041422	0.398676292124797	0.215212201976847	0.82960187801713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1836622193263	4.37276896404314
Merged-chr10-49075545-6	23.6082799056366	-1.21586159383385	0.571283091822965	-2.1282996315435	0.0333122486439999	0.453271720660623	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1841714251321	2.64879081398623
Merged-chr3-68976218-4	6.87332561012134	0	1.35562184185319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21635004-4	7.0998145830195	0	1.35018321579214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45371168-4	18.2121695657415	-1.20013365056969	0.57237820838691	-2.09674937477431	0.0360157672038246	0.475492124377258	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77881170565112	2.88196236592772
Merged-chr14-67884978-16	82.9049028473082	-0.329319115337637	0.252256372576634	-1.30549374025265	0.19172477728817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.54817726448661	6.27939606164304
Merged-chr12-34688994-1	5.16059418919894	-0.735819941720872	0.967268788286439	-0.760719203009136	0.446824802514084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	1.30064958020929
Merged-chr11-61638929-4	5.32760312885204	0	1.36868656059358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-101120442-2	3.80352443378056	0	1.44076720614876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120325087-3	4.16059153626555	0	1.37618776174891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68656546-3	8.05981427707855	0	1.37175590860447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60982760-3	4.40210777668176	0	1.39163840534738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34682239-3	6.20522563793822	0	1.36805372135689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34451430-3	4.3287513269937	0	1.40995600080555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105709694-2	4.78690017937605	0	1.36761608115515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119395149-5	17.8230670317272	2.20904491081897	0.551288882388269	4.00705506929333	6.14805321496543e-05	0.00391337265471084	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52879699405213	5.09877725892943
Merged-chr15-66865931-7	27.5231880967366	-0.0395269639105389	0.356013619490575	-0.111026549959237	0.911595293062919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19388255869183	5.11750617396291
Merged-chr6-34955693-4	6.89439284152441	0	1.36071949318776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115514949-6	22.8261041346325	-0.574824914095605	0.515339659046432	-1.11542922033061	0.264666533664072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57482426092597	4.98675531190243
Merged-chr4-127151316-4	8.54250456953882	0	1.35990845423638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107280338-10	44.4051806073828	1.09396381141609	0.264358965455198	4.13817556568359	3.50078454429894e-05	0.00245547286507801	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3023432026689	6.39514436922854
Merged-chr15-63613279-2	3.588989329531	0	1.38889483212219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174181492-2	7.929234029225	-0.43834729405898	0.867551269702879	-0.505269612721685	0.613369482669811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10903476705634	1.30139522650344
Merged-chr7-112183433-1	3.51172084718369	0	1.37843827505999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97107017-7	25.4935540738056	-0.275092643201142	0.322797404363575	-0.852214545353958	0.394095025049553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.4091977158076	5.1218307254308
Merged-chr6-93127628-4	19.3805123185227	0	1.33991077301874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134863223-5	13.3262049752143	0.771187144499293	0.810340100016504	0.951683304927877	0.341257618818811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.97656658922368
Merged-chr1-36121392-4	7.32324890789764	0	1.36367984648475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60669319-6	17.9061494898537	-0.635325988238257	0.474989361263999	-1.33755835403889	0.181040447929573	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65996102425304	3.22989380593286
Merged-chr11-117175068-4	9.09601459114663	0	1.34635968428933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21054664-4	5.16254859698476	0	1.38202818770364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12009644-4	12.2928674862447	0.394832861491152	0.639035342645203	0.617857628745217	0.536669191524639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21307952544685	2.95408332061333
Merged-chr3-135607361-4	13.5047517396224	0	1.35736983325381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96896039-5	18.5272956343768	1.32675896821795	0.38692189183629	3.42900982397582	0.000605787599833686	0.0247594046160596	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41809060211745	5.84282145636552
Merged-chr12-27313097-4	16.611635335524	-2.01425492595116	0.457851257016453	-4.39936528530437	1.08567947735375e-05	0.000944263211351557	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38231040532441	2.6661875657289
Merged-chr2-169873628-1	3.5799927562211	1.82495103139769	1.31957706960754	1.38298177001549	0.16667045569803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr15-75832206-1	2.87554193632707	0	1.46065316674189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30633247-4	7.17948560956319	0	1.37124530373326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25485753-3	6.6889453871918	0	1.34856425453953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107431400-4	6.67308268947219	0.411526819654289	1.10742004426929	0.371608606674469	0.710184280103055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.02748994520012
Merged-chr18-20694186-3	5.19314532034203	0	1.39535499514723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20649136-2	3.85253081096968	0	1.42375329328503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40129359-1	3.15447261354961	0	1.45054052750905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11000109-6	66.9016071846772	0.0927052632735815	0.500947351160364	0.18505989313816	0.85318205883491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05788074862523	3.14571297733182
Merged-chr18-20789609-1	2.63292858199996	0	1.44422641189242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77858575-3	6.83711887290027	0	1.38005169731284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11347917-1	2.83415013054633	0	1.4475548851939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117147491-4	13.5260469577841	-0.793583480188958	0.603833459291457	-1.31424230965961	0.188764674483096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28399919411966	2.03681675675745
Merged-chr11-90492279-4	6.03958303790326	0	1.36336365691495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36190561-4	6.7710234720222	0	1.3560220042087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80694821-3	8.8779697442832	0	1.39304884966266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77737890-6	18.3572014747584	0.216725275599967	0.466558012696069	0.46451945889342	0.642275621393788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38939402221196	4.77865009594955
Merged-chr1-133034028-13	46.400283126533	-0.233461098720311	0.224026752823706	-1.042112586009	0.297359484013254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.2222882459255	6.01124780603552
Merged-chr7-123312088-4	6.68048475021705	0	1.35951377327408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115711390-4	8.06263543166801	0	1.35237947346098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113733758-4	6.00151013103237	0	1.37112645523501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73334036-4	11.7824988302175	0	1.34714767272377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93365007-6	29.415631346111	-0.817314113937619	0.306589447126754	-2.6658259819351	0.00767994348953991	0.167542425835445	C57BL6J_F1_Control-BALBCJ_F1_Control	5.93187464946342	5.11044363842404
Merged-chr7-106592554-2	7.72676785171837	-2.94493677424991	0.84529977799914	-3.48389630625563	0.000494170905709596	0.0212857656604342	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49248090806776	1.4068548238317
Merged-chr4-133805129-17	79.1602714224566	0.153711255116956	0.205332228170666	0.74859780408751	0.454099656047201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.32128862803293	6.46896101417584
Merged-chr14-51220164-4	10.3981129442324	-0.244785330633454	0.72978329984937	-0.335421940573289	0.737306819448994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58197412052501	2.80307167987918
Merged-chr1-181126946-4	5.09814703321386	0	1.37726671567309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102895016-4	7.04514621462588	0	1.37722236885213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102339286-2	8.28932248823645	-1.73969787455923	0.799335859170274	-2.17642916253634	0.0295231851562072	0.418946781962249	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66812819295265	1.9134233865196
Merged-chr8-111343362-11	37.8981825549967	0.886801196588091	0.352372145406566	2.51666088863211	0.011847279567821	0.226046426825967	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94392328324938	5.73053034707592
Merged-chr6-146141454-4	9.58985016715531	0	1.38226219767046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11589531-2	4.44598068623638	0	1.42283285550898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102524374-4	6.83667791720215	0	1.35888039358123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113655175-3	4.93278015042965	0	1.40093061018316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-24619868-3	6.97026841475742	0	1.35637592114749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25215410-4	8.01572484289492	0	1.35485647338793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169994174-3	12.461950941418	-0.034922284244524	0.909331627844639	-0.0384043435586852	0.9693652978795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.13341594473881
Merged-chr12-80013950-3	5.12420237015762	0	1.39122183177067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9186636-3	6.27521400313472	0	1.39598639350396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53218885-1	3.32922930025364	0	1.41786057704787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32599442-1	2.40924677321435	0	1.46763532750149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45031927-3	8.19250525617928	0	1.35359254462187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45346552-3	5.00099528600009	0	1.38153809691156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45343774-3	4.3590164777737	0	1.38238651963626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87813798-3	9.19231584777051	0	1.36753115008286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4347172-3	5.51527721008314	0	1.40715204511081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-28424552-4	8.56450418349755	0	1.35763665126328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65740642-3	8.37198476543981	-1.52779019892516	1.14256275982467	-1.33716085684397	0.181170135878584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.465515277017237
Merged-chr4-147928661-3	10.1697620946363	0	1.36125814188179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68234759-4	7.18630041642236	0	1.36569123624952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83643839-2	7.40449305522628	-0.0770960583313813	0.730138083409096	-0.105591065694603	0.915906813664057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18069501644732	2.63003866658861
Merged-chr14-41021009-3	5.98610936520327	0	1.37295725299461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53307353-4	9.26757364282852	0	1.34719179926249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165120533-4	6.49167860722523	0	1.35410479626451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138075296-4	9.38763667223822	-0.937413876938134	1.00052405154611	-0.936922881053734	0.34879822847536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	0.724326877898254
Merged-chr14-103929559-4	6.23288419540991	0	1.37059132734838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96875764-6	24.9185732957231	0.597605209650318	0.459226658459827	1.30132952571741	0.193145684971014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09200755069543	4.00547702820836
Merged-chr11-59534700-8	15.3271153220111	0	1.34146204528311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59286489-4	9.78575013182025	0	1.37254970362834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191021341-4	6.72043770862589	0	1.36659492137113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75151056-3	10.2839578665909	0.180559066363401	0.745540162607164	0.242185566143055	0.808636378740795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14177717422059	3.18904744510043
Merged-chr1-131702642-6	21.868868618535	0.591644947610964	0.465676685420182	1.27050583835246	0.203904504516147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46341338959775	5.2934684288296
Merged-chr8-35658490-5	13.8306916545558	-1.1209856459697	0.507038662184495	-2.21084846102289	0.0270463326844841	0.395856650079664	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86759425903045	3.06051448856093
Merged-chr8-126686970-3	10.9493997047552	-0.35759706561549	0.763690399391364	-0.468248737839946	0.639606722378995	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.82415053547332
Merged-chr10-21669104-4	11.4913411438332	0	1.35134087765757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163703130-4	7.96036110013955	0	1.36595159033001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102531216-4	11.7558425388586	3.81341814144368	0.876830333040798	4.34909468542103	1.36700684830532e-05	0.00113622515698821	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	4.49898652345594
Merged-chr6-5425672-4	6.94365680859071	0	1.38607297330684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12102313-4	6.53332759654691	0	1.36121068102791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25448125-4	6.64498603549987	0	1.35557545941247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105198916-4	10.5810519226483	-4.37678029075956	0.965122641151563	-4.5349472742006	5.76178772590305e-06	0.000560295203921939	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41007454815097	0.71701424649985
Merged-chr8-3711886-3	7.4096692375974	0	1.36774885449265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74868802-2	4.8612914618556	0	1.39648915958376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105865189-3	5.96810692781151	0	1.42282646474554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68983008-3	4.07181609354586	0	1.4025795153535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83843729-3	4.90813341995307	0	1.40327169948519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42449759-3	19.3365644699594	2.03167864456561	0.600161417913413	3.38522034893407	0.000711211372918739	0.0278778210301697	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44033112747142	5.2135674250388
Merged-chrX-95176002-1	1.59758586007218	0	1.52951723947546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23261667-2	4.31109139817741	0	1.42007574132903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50834709-3	13.5159269213116	1.59365418120562	0.558058045406063	2.85571401456281	0.0042940172240428	0.110259084686699	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31742847155177	4.16386049016316
Merged-chr16-91416364-1	2.92066986625319	0	1.43634433076091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103013349-3	5.9484696779545	0	1.38657596305927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37851856-3	3.95371876287904	0	1.40779996757726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34695021-1	1.822249599357	0	1.48431474220064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27366354-1	3.22630684701753	0	1.4478240683962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71257024-2	2.18570215239258	0	1.50359620544879	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72429821-2	11.3217914906852	1.01239478658841	0.674490823806891	1.50097636743871	0.133361674163579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64205250841407	3.91631239555493
Merged-chr4-3737142-1	3.0211129026165	0	1.48426278796025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96880146-1	3.44282486520125	3.60603572712683	1.19403757441118	3.02003538616034	0.00252745154368073	0.0745467924378409	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.9273324418901
Merged-chr6-100259808-1	1.82056107391569	0	1.66467579293426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45855771-1	1.34672272535461	0	1.78394599248288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6057014-3	5.10678724762696	0	1.37793365579031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137997454-2	8.71001854217629	-1.25378123011746	0.687303882960861	-1.82420216326474	0.0681215146861414	0.720784218786938	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7682980464329	1.84558675562706
Merged-chr10-75329951-1	2.47148002399371	0	1.48407498786366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90656007-1	3.29709705741528	-0.314166118994606	1.08939018773013	-0.288387138541433	0.773050411691466	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66210910851734	1.30430658010148
Merged-chr16-57521059-2	3.10415453787963	0	1.43940283252684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62616097-1	2.14892511670361	0	1.46213820206466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41326426-1	2.55962594484839	0	1.4090286437138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88718860-1	3.10071911450106	0	1.37744879029805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123146112-2	3.10226046026555	0	1.47422673690805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-26506990-4	6.63649654267078	0	1.36892366727678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19305156-1	3.28154751899468	0	1.5019595517285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32055773-1	1.41900730644309	0	1.96188904331253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6707455-1	2.18572263528635	0	1.52118384389395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10318955-4	9.04297693120195	0	1.36265351860829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-48832235-3	6.19280473995666	0	1.3803052221933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114461792-3	15.6105275993182	0.275243293911814	0.546419452053972	0.503721624252548	0.61445701040214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7498389217159	3.94544611691105
Merged-chr19-57591009-3	6.40435203743473	0	1.35994421751981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31867050-2	4.76441550523049	0	1.37485236461934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120027458-3	5.70494884367896	0	1.38496305632281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67577563-2	7.63264003868253	-2.02453081527107	0.891909806076901	-2.26988289788633	0.0232146890323088	0.356879887190971	C57BL6J_F1_Control-BALBCJ_F1_Control	3.529316372772	0.948471875794396
Merged-chr14-33320321-4	7.49993816357193	0	1.36035716548331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43772038-4	6.18590902590532	0	1.38451503333207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9075025-3	6.37910561837173	0	1.45486179735248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103778455-4	8.20523060262179	0	1.37168265917444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50065061-7	17.7352797894502	0.181835796859372	0.443221200697311	0.410259700062391	0.681615451247469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19723125938913	4.6872327417707
Merged-chr10-41896620-3	4.37937812619442	0	1.419333975593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30614546-3	8.01437081060394	-1.76341373628419	0.821155039985411	-2.14747964807659	0.031755115735785	0.43848136549009	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41763903959556	1.25163494309627
Merged-chr6-28410188-3	4.51463014882826	0	1.38655263045991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84186771-7	27.9762820615713	-0.0127837176222985	0.327582506077002	-0.0390244209783704	0.968870918315486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57953879183006	5.60975956150307
Merged-chr14-105732692-6	19.544453732147	0	1.33879837527367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111726301-4	12.4136329687312	0	1.35117075425251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55122122-4	5.8869167182206	0	1.36454966084434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56655841-1	2.87844958888249	0	1.4051071525847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59393390-4	8.71461484730254	0	1.35832857254535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-106030590-5	19.2053362102594	0.429814755803716	0.496898628622438	0.864994852159886	0.387041614259455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63196310254127	3.76789846247822
Merged-chr9-96391484-5	15.8768818777558	0.235266219870332	0.50072925542611	0.469847162555193	0.638464216298564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69464892974524	3.44411429751836
Merged-chr10-117905858-8	24.7229118901005	0.112589691842938	0.307664865088301	0.365949136930614	0.714403029653758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7757602325158	4.90673696015084
Merged-chr19-21644123-3	8.45142627217613	0	1.40030214534985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43877087-3	5.20826313013384	0	1.39238918906443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25798004-1	3.60673808140595	0	1.3838910416463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141454790-3	5.75466495613237	0	1.39740671344627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53318123-3	5.20423159770968	0	1.39985433275483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84671991-3	6.66368095696786	0	1.37882094818078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43058686-9	37.7514507058759	-0.851147901142534	0.309774777471027	-2.74763461406131	0.00600268622050893	0.140853065828587	C57BL6J_F1_Control-BALBCJ_F1_Control	5.59484866763622	4.54628809514553
Merged-chr7-16295649-6	44.853359185726	-0.566244827885517	0.429680418405789	-1.31782786375608	0.187561278090034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88572805655479	3.52579579296094
Merged-chr9-52175619-6	22.2005158406131	-1.11833110670577	0.90552756904224	-1.23500503456632	0.216828630429599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89200393807192	0.990919527803163
Merged-chr2-116980087-2	7.09224183662355	0	1.35799136561934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40910954-4	9.31612152050387	0.0270916607562949	1.13388220879625	0.0238928352046866	0.98093808933141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.723581231604105
Merged-chr5-116011876-4	11.9396943263289	-0.797343253869312	0.625561177998682	-1.27460475795541	0.202449172571809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71574336225217	2.18034924692091
Merged-chr7-79696720-4	9.27177317514247	0.583097123232692	0.80895779851725	0.720800422842155	0.471032315229954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	1.72466273450451
Merged-chr19-58119013-3	13.4179312347586	0.110060955687922	0.479120407118917	0.229714606292286	0.818313544218631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72673312836171	3.77501649544953
Merged-chr18-9392826-6	18.6007352071234	0.444304041177566	0.52261657027284	0.85015299255745	0.395240032538861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44644068734319	4.58882538408653
Merged-chr11-78475446-3	6.84726647306205	0	1.36994521943243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111553414-6	29.6882635814929	2.19230510947624	0.396408367423037	5.53042087312114	3.19463377006012e-08	6.38445209951096e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60773013735124	6.1283719303713
Merged-chr16-33833908-4	7.18050652673584	0	1.348037489178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107526854-4	13.9695824946453	0.0607935200834314	0.527800966950192	0.115182661439058	0.908300341368329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48369228771169	3.28319881433863
Merged-chr18-62227819-7	23.8167630317124	-2.31859719757935	0.558612924951575	-4.15063292311101	3.31557148376662e-05	0.00235904646971296	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4065012742002	1.5682414637086
Merged-chr6-121272419-9	23.4943018889082	-0.0550476874395046	0.426430333279405	-0.129089520945116	0.897286813704013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05861818212193	3.70681045666592
Merged-chr13-10112403-2	3.20468175093772	0	1.46671627045371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78856507-3	5.2131793500372	0	1.38017358179357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62623077-2	5.34799499607912	0	1.36536052008387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64393042-2	2.44542702146898	0	1.66525343480612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94851903-1	3.34305930689518	-0.423244149635536	1.1658355799641	-0.363039314384769	0.716575516274502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27465395918041	0.879366456215217
Merged-chr17-50442273-2	8.08322191134612	2.1559049707623	0.958079940545472	2.25023495381279	0.0244340345474014	0.368844677579059	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.82190623236164
Merged-chr14-32781648-2	3.54272828271385	0	1.39461214244788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32447353-2	3.89234451142397	0	1.44172106079449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84570614-1	2.70136210236307	0	1.43763799053843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119220378-1	2.47888295402664	0	1.46873858999651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133711781-2	3.66718706207252	0	1.41234229049514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75634326-3	7.82083473536286	-0.526883075950068	0.777403836810334	-0.677746945669646	0.497932155132508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62400334963741	1.9434461957353
Merged-chr4-133185363-8	26.57018676261	-0.527719553634723	0.501222809244323	-1.05286420310829	0.29240323444943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29844691818226	3.15093869164449
Merged-chr5-86086978-4	8.28127873707241	0	1.37047587184082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73732113-4	11.0518985993849	0	1.34829089958719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95954383-4	5.8336892180463	0	1.37179465512529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86536035-4	5.44856161692164	0	1.35544998051867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36566594-4	8.29246543234484	0	1.3881510407008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105502501-2	5.66995419225027	0	1.38641501557474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27765106-4	18.2152528676951	0	1.34105101379752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76154025-2	6.92296290559186	0.571818463791785	0.875491431450526	0.653139988868181	0.513666034135152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	2.1881845164991
Merged-chr6-125410657-2	5.78677624439483	0	1.36391095121659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24717094-2	6.41006964556033	0.264136984091966	0.971038241819247	0.272015017242888	0.785610472483445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26637849737819	1.41391928460556
Merged-chr12-91711008-2	4.71887121492739	0	1.37498826632238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102894463-2	4.58792813336767	0	1.41851658034953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136355157-2	4.43481003387028	0	1.39140501777184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96713355-4	6.98586533691683	0	1.36685749623326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122191180-1	4.09497377034665	0	1.38068906441242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164679381-5	14.1663233267193	0.927961341910539	0.700482797807653	1.32474536821581	0.185255620207982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16430127775811	3.36708302204871
Merged-chr14-103840669-3	8.99777157102033	0	1.39361604046502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62762523-1	3.69303898803335	0	1.39566904710775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79485491-3	22.9679338928841	3.57080307926179	1.0797528485488	3.30705594716513	0.000942820597891184	0.0342248906673474	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.72711687624513
Merged-chr9-45253199-3	12.0314306960774	0	1.38892116494687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169918689-5	15.5521529539018	1.99426855073463	0.571234892431044	3.49115324914324	0.000480940302998089	0.0209147471445385	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77796484182175	4.08328254207922
Merged-chr12-82261784-4	7.63360311814559	0	1.35768500590903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81538361-4	7.2478927220581	0	1.36644958257471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68557042-4	11.8104277483783	0.329486453290039	0.756035047080477	0.435808438461142	0.662975720894208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37947766684629	3.2245955832504
Merged-chr9-97106693-1	3.51405161091685	0	1.39070974060525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99067415-4	10.5817001568695	-3.01000511733369	0.878053411091975	-3.42804330500846	0.000607948473872612	0.0247918012687482	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02473920353734	0.67591700901439
Merged-chr16-11286038-4	17.1151440617223	0	1.39609360892169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118610176-7	23.1130701817089	0.290187002960571	0.468692668272227	0.619141332059464	0.535823256803199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62344383809729	3.59578588428454
Merged-chr7-100100214-3	8.5998865955403	-1.86501090261805	1.27891684808775	-1.45827377706896	0.144765095201615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr4-144956058-3	5.92889777990448	0	1.3640219814296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114797760-3	8.51555204716429	0.375717475200899	0.82122485892226	0.457508648354818	0.647305487557949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02614048505023	1.6036906679178
Merged-chr16-55686627-2	3.56920059858642	0	1.406179880742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101254221-4	5.62659282092343	0	1.36669097920887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36035788-3	7.5015614236681	-1.61658256114078	0.782505853377606	-2.06590475223025	0.0388374740630568	0.49826180719275	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99127408015803	1.32509503823899
Merged-chr7-3957547-1	3.6177455345841	0	1.40578181719045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167844194-3	4.53566100410693	0	1.39082131509826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17711551-2	3.30640807923856	0	1.45263107965593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80392302-4	10.2608877687498	-0.599212004099616	0.820496787949276	-0.730303899905895	0.46520444492601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.30064958020929
Merged-chr1-45865518-3	8.14645686010787	0	1.38746821898005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30942818-3	8.29409974523946	0	1.35505797564223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25790851-3	5.40363613698262	0	1.38824507281997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29736292-1	5.48690411527709	0.738085985139391	0.904862820671873	0.815688265975336	0.41467845187396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	2.33461518298448
Merged-chr5-102061372-8	26.3723471088238	0.57578188791554	0.351163050215722	1.63964257504266	0.101079505312339	0.916615203521065	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17481679821681	4.75936210932206
Merged-chr11-50154378-4	9.09387213764975	0	1.35260858261855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89123545-4	11.3209184680508	0	1.37563999424034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139161297-8	26.327688815079	0.327595525095304	0.344378332899879	0.951266365501994	0.341469176442799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48414690454648	4.80265264665948
Merged-chr5-122547438-7	26.0231195400608	-0.723780508115673	0.414430018714323	-1.74644807429983	0.0807331224951994	0.798793557647715	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67922913868038	3.79140266607138
Merged-chr5-23887288-4	7.23583887691479	0	1.3841850518564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116681665-4	9.8506699769732	0	1.35161678940758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31059795-3	13.9926408338473	3.84838063705724	1.03421069606827	3.72107990343507	0.000198372653554696	0.0103288688453829	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	3.38475172481201
Merged-chr4-101331319-4	6.40582628406944	0	1.39203449963472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-31895004-1	1.40525957643997	0	1.61560809416831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84312986-2	1.9548161591216	0	1.81473540178358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92039030-1	2.82883618078717	0	1.41856688183539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64956666-1	6.70611637325381	1.20152027653167	0.785128259734724	1.53034903741414	0.125930356306388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73339959716085	4.30914688300343
Merged-chr14-72594051-2	6.03544954801683	0.244650165191358	0.876732548425719	0.279047658981816	0.780208250215952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71756895783173	1.93957782847288
Merged-chr15-84994221-3	8.72935892088962	0	1.37728270584654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43876345-1	2.04840472875998	0	1.52850569479065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112233602-1	2.04588433332081	0	1.53933938281126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9134793-2	2.94502110115289	0	1.5148156551519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79333528-2	3.18036574009299	0	1.41369951773604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20811393-2	3.22826923353993	0	1.43175625355086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61563476-2	2.65260655975414	0	1.44785851363901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23440014-3	4.15102982411592	0	1.43162211996326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117311273-2	2.70606172776836	0	1.50901438351517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26688884-2	5.45833162926301	1.46237750685233	1.10083128390672	1.32843018565254	0.184036032942633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.61220381723996
Merged-chr13-97466304-1	1.95520642560303	0	1.72200493543853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152605702-1	2.44382693672543	0	1.47276173782685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32013242-2	3.48604260113098	0	1.42483874907784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-118507581-4	13.4519194187205	0	1.34594965253623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114908470-1	2.88386471575064	0	1.52303384675211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18643456-1	5.34345290230634	-1.98379311674241	1.09048864675264	-1.81917814793391	0.0688842555410753	0.724971780630651	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69963810050348	1.4068548238317
Merged-chr14-27172342-2	3.15287273638231	0	1.39198991734368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38478540-1	2.99225037546006	0	1.41139248640648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16206969-1	1.48765480726706	0	1.86435793342969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34958538-3	7.05087840431546	0	1.35097104532301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-29979438-1	3.34429933052402	0	1.40768116337772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67146464-1	1.70724579449469	0	1.58398633248688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74911080-3	10.2504188463675	0	1.3729770232449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70791584-3	13.5891143462063	1.26651323134466	0.626880878332451	2.02034114473818	0.0433480137530579	0.534684519991486	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51109349299861	4.01392267161285
Merged-chr13-41821129-1	1.50562098114397	0	2.01196028204917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99485652-1	5.00629655089816	0	1.37119031192789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34783784-8	26.4099978923531	-0.0110925118646561	0.359227854408769	-0.0308787632376466	0.975366226327257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64406025920902	4.6051379601842
Merged-chr2-101922460-3	10.9684945710706	-1.80525406668908	0.657418668641179	-2.74597323258307	0.00603316858352364	0.141098191050649	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75007171903997	2.9778550038892
Merged-chr7-70099215-4	7.88214053650276	0	1.35551419388779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145370521-3	5.32511169761804	0	1.38357712068645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115051397-3	4.77987523268111	0	1.39723898033403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118633258-5	13.3854915082089	-1.06969298415481	0.539617698014378	-1.98231634746403	0.0474438455154425	0.569692953031575	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60029881927397	2.58290774264961
Merged-chrX-101770487-4	7.09365702357909	0	1.37101010859033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124924439-2	8.58298786762445	-1.24701135112038	0.631686726196492	-1.9740977598641	0.0483706280257597	0.576871208611732	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61644612296223	2.51411694065591
Merged-chr13-37291201-9	22.2543759142487	-0.461860901588525	0.583600718515837	-0.791398788478344	0.428711316738814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94054798115874	2.22377753961315
Merged-chr1-58720968-4	5.7263798755237	0	1.3496382008412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109860314-4	21.396311842975	1.36444128254392	0.486031219883127	2.80731201356163	0.00499568282327342	0.122989276535471	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40867860977073	4.44848428211101
Merged-chr6-120540082-2	4.76839229495544	0	1.38295975528586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3150964-2	9.68466788070426	0	1.40266294770472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-23028778-2	4.03187802599616	0	1.3883612639639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4948167-2	5.3045048039009	-0.841412109058016	1.01965640431365	-0.825191805296794	0.409262705093297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	0.887876939341704
Merged-chr11-101287504-2	3.86050293091018	0	1.41166019428147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88564232-2	4.75710177350631	0	1.40246773770519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80969652-4	9.21687900258938	0	1.35781371753937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64327183-4	6.00707671995264	0	1.36136165227123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137131645-3	12.7185331412078	-1.56379187708187	0.546940298432338	-2.85916375436966	0.00424759455950539	0.10948079310581	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91356987271159	3.1807989609026
Merged-chr3-61309383-4	5.91436519728948	0	1.36678072999403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21995680-2	3.73675183271372	0	1.37049528287336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129830091-12	49.5212851614108	0.239079338584125	0.244745444014147	0.976848985063456	0.328643920866556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60403212339475	5.84525322398951
Merged-chr5-123830038-8	36.2502935745186	0.722429069227763	0.400662261039747	1.80308738675065	0.0713744917350165	0.740711339485254	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47220392898627	4.57444434489826
Merged-chr13-37331187-6	19.5713966473858	-0.560438751441706	0.533894750235273	-1.04971766662762	0.293847938792643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44859223936632	2.96227705878657
Merged-chr7-101540905-3	6.77157703187165	0	1.35886036145182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103337120-4	7.81000197223147	0	1.3541327008793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20841621-1	3.43690601468248	0	1.38785890411224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4112391-4	5.31691198288643	0	1.3707824362283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170950803-2	4.67533750513193	0	1.37734755868509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32285321-4	6.32829114174586	0	1.35990861304025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75929749-4	9.38631978231302	0	1.349597312185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90062078-8	28.704434561619	-0.994147293018039	0.381240036868091	-2.60766760276548	0.0091161429907849	0.18870693710437	C57BL6J_F1_Control-BALBCJ_F1_Control	5.85280821124723	4.79398503444151
Merged-chr17-3160870-4	7.90973494335219	0	1.35038789736011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4391989-4	5.79354482209215	0	1.35430849949734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35903244-8	25.1838682790668	0.813818024025581	0.387147439065824	2.10208809850144	0.0355455592371106	0.472772462581378	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22973063544683	4.72696576643706
Merged-chr5-74641257-3	6.06216871855761	0	1.37911013177696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94774154-1	3.01102550330161	0	1.4478263631433	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89445355-3	8.84937846772094	0	1.35065908154971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-42980296-3	13.9770074782521	0	1.34983195347528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60605649-1	3.06847143883475	0	1.46835661417664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152556780-4	9.69097895203267	0	1.36104092095517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117042690-2	3.53693263118377	0	1.43511005211795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50438225-4	12.6121278451827	-2.39762426448235	0.774413763911833	-3.09605068532242	0.00196116835208125	0.0613742950206015	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25781591673761	1.57989517605929
Merged-chr5-3421059-4	6.51089955936228	0	1.35771895893574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97029427-7	24.704085118132	0.376152631065786	0.5407843840063	0.695568589239077	0.486699042989136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42580743154785	3.22989380593286
Merged-chr4-55366209-2	4.53946034407564	0	1.40211249135604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67406597-9	40.4026214467635	0.802315535254704	0.406878433750167	1.97188021950396	0.0486232818777837	0.57875361922583	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10655405987261	5.91417262723262
Merged-chr9-121572057-4	8.3170264843667	0	1.35726645591072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4280036-4	7.1937873396509	0	1.36061477986835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101847420-3	7.18824806439598	0	1.36098689288474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86163110-4	5.3167250011303	0	1.39175231138262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29168170-4	7.69911592899279	0	1.36002150025316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67048863-6	21.2936180760675	-0.907082517291128	0.529136071331197	-1.71427080185461	0.0864790029491727	0.83099029897721	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96698996187398	2.63854236508031
Merged-chr2-75997890-2	5.80680311142842	2.56871763242174	1.04361004775952	2.46137686958496	0.0138404896246089	0.252977530431781	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	2.35031680267015
Merged-chr6-116050786-1	2.00950861634649	0	1.43681149644994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36203220-3	6.19044458681997	0	1.39932188328601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77002672-1	1.84995071168162	0	1.54023645236573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47003882-2	3.32539705363647	0	1.42527895634166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-57293678-1	1.23517590938083	0	1.64517252802432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159843482-2	6.04874591398388	-0.689867058648805	0.770336683410008	-0.895539669219707	0.370498669923271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19723607598891	1.80830381258709
Merged-chr12-79014445-1	2.49277184185053	2.74480094669891	1.39069455682074	1.97369072398887	0.0484169205625325	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.25056711339808
Merged-chr2-129903554-7	24.3618713080604	-0.238910237280454	0.362866541642502	-0.65839698584233	0.51028307170997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60499271250299	4.37166502283661
Merged-chr9-41084438-8	24.3785122281385	1.07989266560108	0.542737245745219	1.98971541766644	0.0466222933435646	0.563186943080629	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87310358659911	3.70249397499377
Merged-chr3-126611784-4	19.1494608751218	-0.780518990919653	0.466437981154757	-1.67336070915008	0.0942563077888989	0.876908175774803	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74466494816012	4.08918847943091
Merged-chr14-61687881-3	6.23093133638937	0	1.36037806954799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118831642-4	8.42746669870306	-1.84428327449913	0.764250800496254	-2.41319115832338	0.0158135233876798	0.27569189154294	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99467874641811	1.9134233865196
Merged-chr18-82942944-3	7.05838196526768	0	1.39163802557818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62071513-2	4.84162695759395	0	1.36483209219713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84285902-5	15.4739834566456	-0.583722342703842	0.471924773906481	-1.23689701193673	0.216125319524385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25689813119638	3.92181378466932
Merged-chr7-80011674-3	7.36369607642696	0	1.35882671678736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126695425-7	25.7991805175901	2.41513737697006	0.753627640109931	3.20468258916004	0.00135211499312208	0.0457656406669508	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	3.42488069682449
Merged-chr7-68070782-4	8.0510751566834	0	1.36190614835962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166030394-5	14.5292020599535	-0.516276119492632	0.533315121701924	-0.968050779893664	0.333019009714993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62853785122238	2.69176161404925
Merged-chr1-156989692-3	11.7656506903772	-2.8623718101152	0.788763905802294	-3.62893356181622	0.00028459446572284	0.013974950824054	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13076215265091	1.17788344834821
Merged-chr13-47038217-4	12.0319854269201	2.12188561797787	0.609616519862764	3.48068916907887	0.000500125517638061	0.0214451295118953	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13155283990696	4.79380252349189
Merged-chr5-136949703-8	30.0448363172571	0.738635849473331	0.39292211669936	1.87985307540855	0.0601281046192876	0.667722908886589	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36782937975864	4.959239544707
Merged-chr17-88195484-4	7.46167569158125	0.219761533563355	0.923772532199724	0.237895722056219	0.811961973583703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.30139522650344
Merged-chr3-79529900-2	7.29572193338214	0	1.38648385340223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84176853-2	5.47483564134843	0	1.37680529522471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41402226-2	5.4248550589561	0	1.38067012603437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35755966-3	5.54282746775436	0	1.38595271091889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83430875-1	2.19733989854896	0	1.46969980297729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84598142-4	10.2797038513734	0.6937750428082	0.649671115439232	1.06788654493151	0.28557169257827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49065419848114	2.57446609168857
Merged-chr2-167055363-3	3.98151957830033	0	1.38325266847314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74793706-3	7.41552593394928	-5.08069468856982	1.02584810977703	-4.95267734097019	7.3199293942275e-07	9.92279406336191e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8715329423212	0
Merged-chr3-105000830-4	8.76082966554398	0	1.35289999986093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81014113-3	5.2138622291891	0	1.43867211943574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91062588-3	8.37975636414463	0	1.37728799791248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142537290-3	5.23432784635553	0	1.39798057431719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-93199907-5	16.4030456805465	-1.58753005399849	0.604800124953242	-2.6248838062347	0.0086678541181509	0.18290989208407	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3758985115937	2.28636004977218
Merged-chr18-46409186-5	13.8980468551095	1.26307581181055	0.49507943637169	2.55125888699258	0.0107334563217058	0.210837009440848	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33327484261638	4.2789236352822
Merged-chr19-41764930-3	10.7383533820996	3.14793658500039	0.699718002458129	4.4988646482463	6.83173345211247e-06	0.000641680851260744	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12139497612295	5.33484005733099
Merged-chr11-85131770-3	6.25677051353573	0	1.35690021074764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44996499-2	3.03953239731298	0	1.40451126497284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22297494-1	3.25139410494594	0	1.41657915141491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140819630-4	11.1389930182744	0	1.34494763223658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47280321-4	10.4687628208937	0	1.36012358004826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25532250-3	4.19706893077294	0	1.38780756424229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75893110-5	18.7587705818925	2.13652900788054	0.490529689948053	4.35555492697455	1.32730227357817e-05	0.00110830759277167	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37095162735664	5.42426941209312
Merged-chr6-54955804-7	13.4052522832926	-0.507141008537247	0.505062638029803	-1.00411507474707	0.315323150108938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90298059424436	3.36450551877362
Merged-chr10-19939471-6	32.6842447904606	-0.317262731453423	0.381788780043641	-0.830990191532497	0.405979170375873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06127965835185	3.73740464458059
Merged-chr8-26907733-4	8.86569601906861	0	1.35390007683071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153492062-4	9.99513302769804	0	1.36795136201555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82903705-1	5.88948585465603	1.33210646302659	1.14171546880523	1.16675870602033	0.2433078274882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.46460328489499
Merged-chr3-95694631-5	18.2351372827834	0.878355426465681	0.423759464975968	2.07276886786586	0.0381937950584736	0.493153564271631	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38500065095992	4.29482539026059
Merged-chr9-41162601-8	24.211212116277	0.568668978082566	0.367399458685171	1.54782203576915	0.121665149567751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59883713473356	5.3054262817994
Merged-chr5-66141698-4	15.1715916546303	-0.562567867539531	0.660244568643676	-0.852059818826227	0.394180891997381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39514087231059	2.14165029359488
Merged-chr2-181537845-2	7.02911541994425	0	1.36354945495128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17727935-3	14.8683440694706	-0.0343096569347824	1.10372883423081	-0.0310852229920159	0.975201574319483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr12-95695518-4	9.3402857813941	0	1.35306771939853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82843892-7	25.1557070704435	-1.24260617940125	0.452255137867602	-2.74757780588227	0.0060037262187464	0.140853065828587	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92047486001622	4.64475681764111
Merged-chr11-8673997-3	10.7109542179464	-1.8529073761116	1.25527989793721	-1.47609101297364	0.13991946116488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr11-119057103-3	5.25277587976238	0	1.39557347229923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100060648-4	10.5136434482293	0	1.36868572773477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31022461-4	4.72930445747726	0	1.37937754045893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94344746-5	16.9974162745445	1.56509394023628	0.556661000213838	2.81157462016391	0.00492996539760979	0.121923561896574	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02641055696592	4.84510879664636
Merged-chr7-46839230-6	20.5643595225551	0	1.33880618095549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67469290-2	8.74558312516777	-1.61288835495334	0.673625907920696	-2.39433836494189	0.0166503804342228	0.285773294176068	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69990226423732	1.60575736942423
Merged-chr4-93551244-8	24.1987846642701	0.146852425825375	0.499054762311813	0.294261145099785	0.768558360633726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27586448731133	4.40666718515193
Merged-chr16-33777420-4	14.5522447612832	0	1.38194344124456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11707011-1	2.91230855541189	0	1.43447767896441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29478852-3	7.31853744260433	0	1.38373292946179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41408035-1	2.14409987344245	0	1.45580650015477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167760944-1	3.04047501071459	0	1.39111667730687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19506161-3	4.9318170838588	0	1.39295412809744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131073281-2	5.16485564798442	-1.82392908006856	1.32162888129113	-1.38006145740908	0.167567723106767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0
Merged-chr1-140466215-1	2.06395362792084	0	1.48989800555548	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4548829-3	5.07817329611228	0	1.39471080099806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65458018-1	1.93245461691891	0	1.46321573535043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53880943-1	2.11431303680885	-1.91976423012983	1.31389547105832	-1.46112401817131	0.143981409960752	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	0.55634759613363
Merged-chr18-26868887-1	3.08313335144	0	1.41176972604228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4478755-1	2.60990585604517	0	1.42554792688495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121682645-2	4.3782483844333	0	1.416983133436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32939918-1	2.10527216456504	0	1.44294507038477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20151500-3	4.65424812648236	0	1.38075814939074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-57211864-1	4.0556196005808	0	1.40975868228422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128674666-1	2.19418209964939	-1.23234502292899	1.33631921020538	-0.922193599790863	0.356427600913471	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.577068348605183
Merged-chr3-79234253-3	9.91962423370832	0	1.37674352890381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110685385-1	2.5873295697213	0	1.47363135503719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66818880-2	3.65016183670139	0	1.47401208220551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101658375-1	2.16508925436938	0	1.44436368321364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74454822-3	8.43680414015798	0	1.35299831342821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19365814-4	12.5799834038173	0.834243786297645	0.528484617732724	1.57855831240022	0.114437402978448	0.987771702065563	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11561005221855	3.79584484791332
Merged-chr10-5057111-1	1.86908077525866	0	1.59650952634637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79430444-3	7.82307623047346	0	1.35240809166267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130783929-1	2.21916380896282	-1.06475631707197	1.02814548510537	-1.03560861035426	0.300384773378662	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00626573557989	1.25298535761957
Merged-chr12-73445785-3	3.78857333964371	-0.690776022961189	1.41622800565525	-0.487757635213256	0.625721522353991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr1-172612987-1	3.82648099365507	-2.27913566594783	1.17980579418767	-1.93178883946496	0.0533855741596191	0.616926684541816	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0.303163067301871
Merged-chr16-93288260-1	2.69235414627087	0	1.39236438024163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98605803-1	2.18515038806526	0	1.43398983678848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76630258-1	2.53534565238486	0	1.4097127303782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43251450-1	5.45457085684101	1.48150973210241	0.868711968380228	1.70540960183245	0.0881180588089765	0.840871026385365	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65199033198162	2.72630444147286
Merged-chr2-148073976-4	11.042509172484	2.13433816750242	0.685723999071499	3.11253240427987	0.00185489649451431	0.058827490399827	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82361065065357	4.00525128850541
Merged-chr5-21658807-4	5.4626514363029	0	1.37191880293544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119118897-4	10.7866016757991	0	1.37103913002528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73047185-4	5.60208892031076	0	1.35681661702143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-5692457-3	5.41004557397502	0	1.36342386386039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102055694-4	5.71795912975567	0	1.37793081666245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117209819-3	6.00357746634958	0	1.38344885514766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136799089-4	6.26002387478702	0	1.37684086345905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95163394-3	11.5562050006452	0	1.36520254691715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19217823-4	11.8276646797497	0	1.34783053884898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-39432114-2	10.1035893883576	0.378891729821587	0.632355720655485	0.599174985605945	0.549056201733232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35391506586093	3.0255164625829
Merged-chr18-88932274-2	3.69319109574236	0	1.51809800146064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70842918-2	4.60276887444963	0	1.37759597620981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91908403-3	5.45833316327268	0	1.35926086544008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58543366-4	6.73379438496024	0	1.36239598841485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74213040-3	13.036188721389	0.204591046226453	0.635838562494611	0.32176570955963	0.747630193679317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81099288043475	3.08242281890086
Merged-chr6-135940147-3	15.7575550808519	0.92606012747087	0.601824236043066	1.53875512485111	0.123864089033247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.70656116796365	3.61502880757579
Merged-chr19-57355653-3	7.81395289608015	0	1.36064618186646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46149652-7	28.1467140832132	-0.281857876375106	0.483361379209153	-0.58312039086835	0.559812257802489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87812204049344	3.39981323787185
Merged-chr3-100998255-6	10.4560931720644	0	1.3447008265987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31422595-4	5.56596588231276	0	1.35889308505938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-26764926-2	5.32442589611182	0	1.36146996354196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36633805-4	11.0695996325033	0	1.34427992359679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86717675-1	2.63861052856524	0	1.40281698754582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85343624-2	6.48325700740545	1.6253645923393	0.824208800960655	1.97203013416607	0.0486061666042606	0.57875361922583	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46261730325446	2.97856909780133
Merged-chr6-137560443-3	5.29972523396695	0	1.3737093915214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34213015-4	17.1455497546787	-1.2257531607602	0.43001884041464	-2.85046385311463	0.00436555121414332	0.111726458780422	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10819091784351	3.98986585411025
Merged-chr2-90533240-4	13.9837195665408	0.575010136501453	0.563815429106761	1.01985526968006	0.307797106178563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85611198817566	3.13059715405735
Merged-chr7-92675908-4	13.8337080072745	-0.887099843117842	0.599371691102923	-1.48004961910273	0.138860005272764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36096785367558	3.66917520363106
Merged-chr18-4234452-4	7.04951610884414	0	1.37874670534345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29786349-1	2.20162959640066	0	1.44904003576949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33906392-1	3.47303648783102	0	1.48385058136399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3301574-4	6.94203952298278	0	1.38055970683173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38342964-3	5.41897850558438	0	1.40003808524226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116984032-3	7.09057263337599	0	1.38663167986135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120887874-4	6.09524255385641	-1.33988735816544	1.32310347247887	-1.01268524044845	0.311210529975139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr7-106236859-3	7.2924822047268	0	1.37775343485767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73756905-3	8.88069847747028	0	1.37088929364963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30214960-3	6.9977193985871	0	1.40049990746997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94739970-2	2.6489834430182	0	1.49936567983364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13978846-3	5.88175628122804	0	1.35736513846635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11350254-3	5.59142992820654	0	1.36508576816795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111821905-3	5.27928793838054	0	1.3786297463449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69197861-4	7.62398374338819	0	1.37503963827485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115166970-4	8.27190125104061	1.23678765144017	0.969309487672704	1.27594712232693	0.201974211841728	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.85774282263707
Merged-chr13-55474688-3	7.08642569142924	0	1.36540875572794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60588837-3	10.6970117640377	3.90964606679927	0.775309157069951	5.04269300981122	4.59025365150672e-07	6.44758651788769e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	4.69795509455176
Merged-chr13-110600546-4	15.6544900198121	-1.20919873188766	0.660791708713381	-1.82992418933657	0.0672612757855445	0.715284424755587	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52497320336197	1.85449916425446
Merged-chr1-54585443-7	27.533369807806	-0.0260584816396702	0.450698690041465	-0.0578179662276649	0.953893627137858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67897398747539	3.43194141857276
Merged-chr4-123432105-3	5.41713217581881	0	1.36266965249894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28433245-6	14.2553695586195	-0.43623719741518	0.430031521324261	-1.01443074701085	0.31037725904659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13026207686517	3.70645196800888
Merged-chr2-38658638-3	4.52895790600964	0	1.40165391995441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136331378-7	38.8317563086617	-0.122386330834972	0.424964047649565	-0.287992199603423	0.773352709654747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73730543867919	3.76447635095159
Merged-chr7-134689230-7	26.1260337627922	0.0048259534692099	0.442921674927082	0.0108957265864318	0.991306639986361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1143696678263	3.98247111448789
Merged-chr5-62711194-4	7.68267125887303	0	1.38130723748252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19122389-7	21.8169057799241	1.6599806244706	0.438538956409519	3.78525237087597	0.000153552669322171	0.00834696955168389	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07906840187467	4.71131504783045
Merged-chr13-56539728-1	2.42384801548567	0.586926959496135	1.70138205863004	0.344970699860755	0.73011639827119	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr16-78205022-2	3.34878796691983	0	1.44898526645995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43894312-4	6.56454698028084	0	1.36506521659589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107363823-2	3.29072254667574	0	1.48308454143593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43050786-2	4.91207302116105	-1.32962356884937	1.40606025184598	-0.945637690208327	0.344333413481158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr9-15880356-1	3.07145673466112	0	1.43790372867294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32521865-2	3.04950460925672	0	1.40951241134689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26638281-2	7.93045500802809	1.62030879546176	0.858930406787503	1.88642616754238	0.0592375490890251	0.660803187139404	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32643090402693	3.25218769078595
Merged-chr14-19747911-2	3.91373058371163	0.623797442387247	1.37334653353671	0.454217072788478	0.649672596042563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr18-39856726-2	8.64855204954206	-2.56206593125714	0.988984902959462	-2.5906016599347	0.00958083190641946	0.195204063568611	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21371271926773	0.67591700901439
Merged-chr17-71196866-1	2.71029668465918	0	1.45521462898042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68478785-2	3.98831239937407	0	1.38797381008569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41503728-2	2.48272635093857	0	1.45084016742116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101741217-5	15.2965253282848	0.63066175717181	0.533996670153346	1.18102189099926	0.237594027063789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43252686037061	4.41005443557317
Merged-chr18-3005639-7	31.5029763088745	0	1.42040309725695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34233925-3	4.01300482730502	0	1.37690817688581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43842820-5	12.0326078624818	0.187391101106037	0.817797126688875	0.229141305331742	0.818759090379007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	1.41398715281163
Merged-chr1-181246808-3	8.87935457829763	0	1.34890242863262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12037434-2	5.72386382017694	0	1.37809625669756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45107658-2	9.34865038582693	-2.59680350049147	0.700641249939393	-3.70632402918912	0.000210289226097175	0.0108764148824133	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23650923244526	1.34263109599227
Merged-chr2-145888902-3	22.1852821058778	-0.576893115005515	0.361808414632057	-1.59447124963135	0.11083052519358	0.968777214597633	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32468424571789	4.7000956494862
Merged-chr2-145863289-8	35.4288765021737	-0.0824330100883698	0.38791269633081	-0.212504026983617	0.83171383644732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9409770131161	4.89079422758796
Merged-chr7-36730808-4	14.119758924024	-1.1147486511159	0.511030229873307	-2.18137516325064	0.0291556791205712	0.416742982202243	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79276016663296	2.54548746396575
Merged-chr4-42965182-4	13.2456141495741	1.00139948069828	0.581718306987567	1.72145086147286	0.0851690416342174	0.823497675950627	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76616155187212	3.78338293838186
Merged-chr9-46028188-4	11.0300970851055	0	1.37122416294427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51964466-4	6.01166139416677	0	1.35479476469308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35632665-6	24.4955424140931	1.05055631701061	0.445483786350221	2.35823693072569	0.0183619692265095	0.303109105734537	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62495648606044	4.46477052337801
Merged-chr17-17871204-6	20.8514036687626	0.650655124881053	0.654737779401718	0.993764443340362	0.320337560473379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3640534479995	2.91612501349142
Merged-chr9-105648505-4	8.8467836283349	-2.17794304452029	0.685821925013913	-3.1756684426152	0.00149491704262787	0.0493095846603206	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18200306088207	1.51226750748471
Merged-chr2-45081618-4	6.2321268485742	0	1.35649971624819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44658417-8	36.3350679739495	0.40307504043699	0.425817554519858	0.946590942901563	0.343847260904951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51642173242484	4.94326386748775
Merged-chr3-79854644-4	5.31214797151294	0.624950203334627	1.36098395223172	0.459189987001567	0.64609774037077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr8-41138686-6	17.6684792827793	0.932670429318712	0.737576058883612	1.26450746073618	0.206047944566983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72774128397143	2.7130535428877
Merged-chr17-35725741-8	28.3737560179062	-0.23620335094967	0.357628790454832	-0.66047073740698	0.508951791085929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29900524264058	4.99658550924797
Merged-chr2-73038628-4	10.5493667467308	0	1.35826419163443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50696080-7	28.196059975142	-0.803014114729699	0.368060961986684	-2.18174215052655	0.0291285681962369	0.416574543167388	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91914125014022	4.10075120064388
Merged-chr3-127923420-6	25.6152068579121	0.718950720750838	0.421233227743267	1.70677589847927	0.08786371377644	0.839842380371637	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80713977578518	4.8993426730978
Merged-chr18-73808698-8	22.2803969984374	0.467329368994174	0.336171150024986	1.39015310790185	0.164482389311906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80947508813364	5.27279910339179
Merged-chr13-58288042-4	6.72183790585735	0	1.35520205150893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94958142-1	2.41262498740453	0	1.44601726082114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103102832-1	7.52171411229319	3.76702862442032	1.1168597336837	3.37287531353257	0.000743876300345729	0.0286376570895846	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.28653589763239
Merged-chr10-94480682-1	3.15856692144654	0	1.42395688435272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47759823-3	6.20098001535459	0	1.3595546659758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118175689-1	2.36200151901739	0	1.45112353762281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95459310-1	3.22508372756348	0	1.40769053143988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-40776529-1	4.61555437085494	-2.14936585473704	0.884684945735215	-2.42952687857802	0.0151185438624258	0.268571544384838	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26657828344339	1.55469575053842
Merged-chr11-44543740-3	3.82426002305061	0	1.43772902823157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35120330-4	6.74533268899757	0	1.38336473272989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78060269-3	5.3188163186816	0	1.36462836730482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55652053-4	8.77088388622933	0	1.35716277033543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-16457285-1	3.69260544301214	0	1.47890398860205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-57695897-3	4.92359182810885	0	1.38137589661104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59141969-6	18.3983282069407	1.7770680615279	0.423314048288351	4.19798981090608	2.69294744752864e-05	0.00198893927038328	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54797863229524	5.21317420551047
Merged-chr16-5306793-4	6.30835377536539	0	1.35897746278097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167145926-2	6.67876034728423	0	1.35314172165513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34826103-3	6.30514043556272	0	1.37357388352086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92675528-2	7.92400061405852	0	1.37363717932681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32586131-1	3.90296881013648	0	1.38419695760927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151457291-3	6.71938302065139	0	1.35469028914349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79527535-3	5.79182793827528	0	1.36813710985659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69399502-8	30.7966265017743	-0.652481486525035	0.306765664995251	-2.12697039134134	0.0334225433928726	0.453977020563009	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76820779722421	5.05147203239649
Merged-chr10-118041275-2	8.64279433159048	-1.04119406912769	0.798942082263528	-1.30321595550183	0.192501044389343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83318424860471	1.54475622622846
Merged-chr12-71007053-4	6.5212660591662	0	1.36768517639021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106151998-3	4.51260309750479	0	1.40171802381265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40437330-3	6.0326836566743	0	1.36425253046481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139742831-3	5.29667879991476	0	1.37729658604525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110667376-2	4.44373112811065	0	1.38102370732503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169779234-2	7.33126061602601	2.99815177338156	1.08612918135813	2.76040071921516	0.00577305018332544	0.136737300406134	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.5111668411454
Merged-chr17-8225386-7	16.971872912984	-0.465507462399291	0.449483494843086	-1.03564973517392	0.30036558016849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39882954666834	4.09305853700523
Merged-chr11-119446248-4	26.7520750597771	-0.117484912203398	0.451948858457903	-0.259951784377261	0.794900965757237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72089747953256	4.63466853807709
Merged-chr3-16210760-4	6.83188988144561	0	1.35984312269071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22517752-3	6.31709747972169	0	1.35713962375394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5012448-3	6.49917191719179	0	1.37501029363233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66216109-3	4.58307519160648	0	1.4069703094932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-15140446-7	22.0218535999908	0.342253934341212	0.352708482920967	0.970359236916631	0.331867459778677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61939019336257	5.13680313352203
Merged-chr17-5806236-4	7.98719496137497	0	1.42179093418036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89577209-4	6.47795094511528	0	1.35238109503287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67550026-5	13.298640993341	-0.440985472248998	0.876921690514005	-0.502878965156531	0.615049370968538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	1.50303165271916
Merged-chr2-163766441-7	31.3291118962306	-1.92598920423619	0.380730873085356	-5.05866306199025	4.22206124141807e-07	5.99235057499333e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.79857054461746	3.34367533262154
Merged-chr11-3178001-3	11.348311976398	0	1.38877306792473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90310541-7	18.7842297928076	-0.0716786276659776	0.453842389306837	-0.157937269313811	0.874506229942149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98663543121387	3.95288196034768
Merged-chr12-44933121-4	12.8432244608056	0.240055291585321	0.41897496729193	0.572958554390333	0.566672756585145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95035314137564	4.23088855657488
Merged-chr3-127487484-2	6.37491033939523	4.06082659882414	1.14320940819471	3.5521283937269	0.000382128350342258	0.0175440160441341	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.33461518298448
Merged-chr4-109333334-1	1.56966857575723	0	1.52380822889962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131111702-2	3.09933180136894	0	1.4259322959312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53428941-1	1.66620594924745	0	1.47993466326557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118816310-1	5.38501737384787	1.47820315289642	1.09986247067138	1.34398908255693	0.178951917297931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0991499147123	3.6957676563454
Merged-chr18-32693438-2	2.63308069794847	0	1.45149445522565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20380734-1	2.0972071912775	0	1.54714991306505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32545779-1	2.57117429002448	0	1.41747308817323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113624510-1	3.37005897245193	0	1.3927259750868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59229271-1	2.30100778561278	0	1.49972647033703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93108532-1	4.6335736553093	0.542277842953977	1.46932619812302	0.369065659924057	0.712078784297084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88790982993553	3.29572666835591
Merged-chr6-72836104-3	16.5204032805898	-1.70186728197167	0.859800472006231	-1.97937467747672	0.047773837363522	0.572012780890681	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77743761853437	1.02674429890598
Merged-chr13-97203288-1	2.01448128408191	0	1.48878750891504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36841906-3	7.00844128968644	0	1.36272803125489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97520192-3	11.1935621117259	0	1.37470479936817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36815300-1	3.19454373589769	0	1.43189684969063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93013631-1	3.16757397063795	0	1.41617093480964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23162234-1	1.29845820638892	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30616950-4	5.77141454343143	0	1.39185490001111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49896728-2	3.13592702750609	0	1.42938873742612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113657195-1	1.9399107380701	0	1.5603040415398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120831273-4	6.70727506146311	0	1.35148497863585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34047964-1	1.91951739219542	0	1.46667959822476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30267666-1	4.30233886780126	0.939018059903323	1.06720821359925	0.87988271448587	0.378922849672633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.55412587431917
Merged-chrX-98964720-2	5.54575819877276	0	1.3551401703666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44371860-1	5.64755203114477	-2.96367553695911	1.0517640602139	-2.81781404125596	0.00483518046366679	0.120290880926528	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65251955765114	0.679405493272835
Merged-chr5-74954051-3	5.67922890428911	0	1.3964415938165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144592122-1	1.84381369492852	0	1.59246458886302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60818311-1	3.11868101701553	0	1.42011172081968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53993529-2	4.7321865243453	0	1.40481199941898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132019760-1	4.42187560300657	0	1.37165601868409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169087468-1	2.24734638588486	0	1.49770550760081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97672604-1	1.73203676046978	0	1.5111964472445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14475837-3	7.45005904315977	0.296529821092703	0.891888356422291	0.332474147641302	0.739531257693323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30944904015933	1.55145391112725
Merged-chr11-73224157-1	2.84877029376764	0	1.42295140204402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143523086-2	3.22622628491283	0	1.44228702864498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34176361-1	3.43754674959061	0	1.42456774451598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75656708-8	38.6863049037095	-0.370627991191028	0.386041414976933	-0.960073134156278	0.33701840863265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75819300733485	4.39647818058766
Merged-chr7-88285513-2	4.67903223305084	0	1.40056261239978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90736807-2	5.71310211508277	0	1.35590770403289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40647968-7	20.8972739786922	-0.0643916417295182	0.434832567406582	-0.148083760408199	0.882276665456653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69755084192145	4.44647580039225
Merged-chr6-13875180-3	6.75775947990799	0	1.36544074654823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22780393-3	5.95328588380138	0	1.36439803803216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25412375-4	8.35177922041079	0	1.36600970287364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4935325-4	9.22344896610767	0	1.36968802094619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51863834-2	6.6743261420475	0.524293439213035	0.762821739003179	0.68730794156202	0.491888695398118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98733255708278	1.87707356607014
Merged-chr2-160212535-4	10.3965814985215	0	1.36863769166364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78198920-3	7.81526884398022	0	1.36106758873229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46273801-8	29.9501986075763	0.218826190120897	0.345015616708686	0.634250102092227	0.525917614913148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74502254286613	5.00460864116118
Merged-chr9-74905060-3	7.03362705843008	0.592537049449224	0.866928398053112	0.683490183018463	0.494297151377556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19454903376793	1.80610776840488
Merged-chr12-70991939-3	9.81433908354358	0	1.35322907518334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97830764-5	18.8275678401598	-0.00100265229499353	0.580337652326866	-0.00172770505407222	0.998621491497535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50499287032223	1.81759300912067
Merged-chr19-34420930-19	76.1072773106979	0.459990338873227	0.315023303396684	1.46017876745454	0.144240949133248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02187157193905	5.44626663467562
Merged-chr4-6376129-4	6.5838813076329	0	1.39146845783177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55318702-6	11.8220410755755	0	1.34331749397819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105466941-4	5.19988503808708	0	1.36957627135578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68148545-1	4.75260000869804	0	1.36402296337269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12008270-4	13.4437062068208	0	1.34729270329535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112285694-4	13.284651867508	0.673387441825772	0.592933354344533	1.13568824707151	0.25608706110086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91136621420107	3.45579897469603
Merged-chr6-129369903-4	7.28152077449596	0	1.34978302176266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111494453-2	3.59258668424978	0	1.38682573436693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91746609-4	6.58265130139964	0	1.36926753676887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181345748-1	3.01284068490681	0	1.43563452390608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85575193-1	2.58480619249184	0	1.42202873577496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118465257-1	3.01957821309812	0	1.44365237151249	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90743919-4	11.9082963373697	0	1.37207324542525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19631471-3	6.54182865705745	0	1.35815378590025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79528135-4	6.9055904180769	0	1.37815949690523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89872376-4	9.47526688498814	0	1.35625145704384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147682556-1	3.59317768726529	-2.46612267185099	1.24080024135049	-1.98752594468136	0.0468641437254992	0.564978484979909	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0.303163067301871
Merged-chr2-113644701-3	10.2554738999048	-0.033422117786476	1.31805167269532	-0.0253572135894568	0.979770038733224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr2-143838872-3	4.02973636087872	0	1.40460822962127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8477663-3	5.34861475699094	0	1.37401528549276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100159987-2	4.64501501771479	0	1.40963229795626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99289325-2	4.58249920299675	0	1.38126288814035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117792488-5	9.91747637731729	0	1.35517175964018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35211751-4	11.550042004138	0	1.34378877864638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34250883-3	6.55429562433835	0	1.36549802800138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-112320505-5	15.1453203533932	-4.09492608429253	0.842653022630986	-4.85956375200208	1.17644695187573e-06	0.000146675412516084	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59271186262351	0.577068348605183
Merged-chr4-59040777-7	23.5274561125517	-2.09172136078595	0.486992846398499	-4.29517882296432	1.74552577653856e-05	0.00140155148725051	C57BL6J_F1_Control-BALBCJ_F1_Control	5.61506256824729	2.88059668620008
Merged-chr3-89908548-4	6.44454493730895	0	1.39104503546005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105500049-4	6.08285432789229	0	1.36065512019544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100409338-4	13.0663523317889	-2.69679258736744	0.648463730146227	-4.15874082388435	3.20006737128866e-05	0.00228884818731422	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42390114017891	1.66683653681755
Merged-chr8-26884605-4	10.1294896607739	0	1.36487184475864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83622458-5	12.0481545170207	-0.174119703278971	0.534851418884596	-0.325547800998806	0.744766511094675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75537872938039	3.00133472841118
Merged-chr7-29229306-3	5.7153299131144	0	1.36613920992216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45619122-3	6.34899442155875	0	1.36689817821003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-19857048-3	15.7651021287831	2.74612087851511	0.515034918197761	5.33191203447814	9.7184015914564e-08	1.67708759399993e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08307023099066	5.32815537278121
Merged-chr8-124830202-5	20.2796457878708	-5.21200715226064	1.01105361296756	-5.15502549559446	2.53596422743235e-07	3.85062791729037e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05222436434365	0
Merged-chr11-117881997-4	9.75644944353387	0	1.3568377663405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95955712-9	31.8412579401869	-1.94001424377798	0.507899351639052	-3.81968245778878	0.000133623585804374	0.00748058136018535	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73740988830479	2.62700964376451
Merged-chr5-123137807-6	13.1974740075297	0.81053551992691	0.551444918895041	1.46983949285637	0.141605230244515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84812292246362	3.49037743984896
Merged-chr6-16857252-1	2.3410087898707	0	1.56550241664064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121803074-1	3.10303541858586	0	1.39465247724394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60181045-3	6.11707315835478	0	1.37068490523436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24715338-3	4.22992092534763	0	1.41146457855453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96227250-1	2.9665559243202	0	1.44677235049476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95320397-1	2.98307819941199	-2.26069222062556	1.2501738179836	-1.80830232412948	0.070559460357225	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr15-25653056-2	2.78795470698276	0	1.5042533986828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123562645-2	2.53473357050806	0	1.49104311639436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53800755-3	6.26268968365847	0	1.43017108033143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95044309-1	2.87592722423298	0	1.42216621365271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83407629-2	3.47672151065676	0	1.45640435941022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68668276-2	4.03289584010612	0	1.38869910204712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171474372-3	9.69333334046731	-1.816931925259	0.925501010854495	-1.96318740222819	0.0496244026284499	0.586675272396675	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33881750023062	1.02748994520012
Merged-chr2-167960433-5	14.604680367325	0	1.34457673983109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10926261-3	11.5268644126703	1.55782086464441	0.558293743215274	2.79032477719122	0.00526551930187357	0.128123708026206	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24402839470236	4.959204940931
Merged-chr6-54772235-3	6.56338341676145	0	1.38148210523762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15764316-3	5.1402720715708	0	1.37261548419568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9485452-9	37.1394369156515	-0.548663050032843	0.40116002993223	-1.3676912182042	0.171408749935207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57482646985546	4.06160881093068
Merged-chr11-95869611-5	13.7341620882777	2.62771108033185	1.13531772973307	2.31451602623142	0.0206394331913616	0.327286741204558	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14046671619316
Merged-chr1-106389869-4	8.13921574488946	0.815858239952259	0.765050736248542	1.06641063304227	0.286238057140964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99708834426639	2.73199680147298
Merged-chr12-52001774-4	5.05104712571997	0	1.37152806002043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84803872-4	6.77024036735809	0	1.35798745445104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16973600-2	9.41283513213201	0	1.35817676046252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149692676-2	3.89110222848148	-0.436445967680718	0.993028197464632	-0.439510145628329	0.660291932254953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77128661274154	1.25298535761957
Merged-chr2-160598030-3	4.67244059560659	0	1.38258466586007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12667922-3	9.33028820209611	-0.341216513575327	0.736530090899254	-0.463275727348389	0.643166741803687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47169394410276	2.20727117605912
Merged-chr7-118483230-6	16.1881788827922	0.204700828148745	0.84318214438896	0.242771777736219	0.808182199698951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.03664014429255
Merged-chr10-20046319-2	4.83238474713554	0	1.38100470207124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137436553-1	5.56747480656189	-1.68339435396873	0.907744400654886	-1.85448057047144	0.0636704373303613	0.691658933421485	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71594332969903	1.76644250848645
Merged-chr1-182923042-3	13.6182849021594	0	1.39117622385564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19759927-1	2.96998313150912	0	1.42979466593221	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44951850-3	6.39749110488632	0	1.43606140389802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24422246-3	7.24014746887141	0	1.36149826086079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105821460-1	3.12675788125459	0.147840867771037	1.24112272670394	0.119118653288752	0.905181352773534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.17858215524007
Merged-chrX-13518240-3	6.90087813865701	0	1.34815481659355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88390605-3	5.25290091339908	0	1.361135717138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26828542-4	8.00904786886809	0	1.36445587594949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30584215-4	27.1383599009936	3.64625682487539	0.760378996011635	4.79531502579747	1.6241938231542e-06	0.000190690177176759	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20724342340814	4.92820285179122
Merged-chr6-70881114-2	4.06722456752966	0	1.40901121801379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85492282-3	6.66788566090413	0	1.37017564648892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36090228-4	5.78982304369007	0	1.36190632363153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67229082-2	5.63047375439304	0	1.38247696596053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120140408-2	4.88017709491927	1.14552475259005	1.28157403013514	0.893842045526829	0.371406409459171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.724326877898254
Merged-chr2-165888983-2	4.84873115710372	1.87712528191041	1.00017546018422	1.8767959789422	0.0605460618023489	0.670749522471631	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.22225685747394
Merged-chr4-59465647-4	10.0980435652426	0	1.35145842236715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25561329-2	2.92525854298606	0	1.41113157733351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21146767-4	6.80270429752854	0	1.40545671773489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5597049-4	10.0216453789801	-0.875855134990602	0.756573727022031	-1.15765999228929	0.24700281667085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64695715578682	1.55926189265627
Merged-chr18-53951291-4	9.50515115507179	0	1.34457604105115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117348472-5	12.8123218808528	0.339496437249973	0.54735853790748	0.620245074732638	0.535096449854832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59016101190973	3.40988903716157
Merged-chr12-25438898-3	12.4649721806937	0.939725586060834	0.778576670139259	1.20697886554031	0.227440283252675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	2.34871576270704
Merged-chr7-99107035-3	5.52694300765104	0	1.38472531190748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30934172-3	5.77761860184314	0	1.38566024292835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6251314-5	16.2207500985981	0	1.34500993663461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105033862-4	18.4258498895256	-0.966917979305624	0.43240711249124	-2.23612875776925	0.025343338183541	0.37836817366633	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25184471453043	4.38708881255953
Merged-chr1-53774138-7	27.0161061457679	-0.254661060611664	0.348885602899798	-0.729927112196729	0.46543473880814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7176602560249	4.52703295147805
Merged-chr2-133467944-3	7.16249433526078	0	1.3723084937577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89436110-2	4.32360788770785	-2.53075469334485	1.22265490767723	-2.06988470536851	0.0384631425404536	0.495571928266537	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42436654726916	0
Merged-chr3-9852469-2	5.97492729439512	3.09865143806933	0.918935080840912	3.37200255238245	0.000746237568244631	0.0286676522771802	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	3.81324045230081
Merged-chr3-130878973-4	6.95056108465766	0	1.38272839591799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17619207-7	23.6912972787248	0.798125391764364	0.331862152821702	2.40499070164584	0.0161728772805005	0.279837044631291	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42415931434126	5.24533244559482
Merged-chr17-34309846-3	21.0660507738325	0.144333415181059	0.494343676466979	0.291969781453652	0.770309728690013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.778048063411	5.74775936755532
Merged-chr2-14340575-4	10.7133096650925	0	1.3490964222239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30702402-4	10.9879019348433	0	1.35968381267651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45122685-4	14.0726199951048	-1.12885313080256	0.566152186739866	-1.99390403718646	0.0461625426785984	0.559345179297054	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81825311799543	2.6261095282688
Merged-chr5-142821851-4	10.2159834786235	0	1.3458020121725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43879547-3	6.53984645477741	0	1.36546967803062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8741011-8	24.6250134145704	0.0894896315060567	0.408848880371781	0.218881928757346	0.826742023913135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92816595207815	4.14061798424229
Merged-chr19-6288183-4	5.23564374522802	0	1.41746591276133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51237716-8	27.6818121229052	-0.194814776726362	0.373434728579708	-0.521683608450946	0.601890639282755	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7802805912507	4.56860485781191
Merged-chr10-84401313-4	5.75115373491727	0	1.37136123776587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31967755-7	17.8746763757255	0.203244879186558	0.409198724140542	0.496689914205969	0.619407735859832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86816681944572	4.0175793385642
Merged-chr16-31883760-3	4.93446565871732	0	1.36361075902173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-23865096-3	9.76573429470576	0.992634847739772	0.696362274345058	1.42545753023936	0.154024988254741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32092586863413	3.17406884017877
Merged-chr8-90869453-8	22.9516170320656	0.15108015797299	0.380117857856456	0.397456091184335	0.691031159693215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53033611107643	4.65018315285057
Merged-chr15-25377660-1	2.73622847527376	0	1.42393774143309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109631343-4	5.33098590457992	0	1.37569714071252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16670471-3	5.82966285230145	0	1.3882005464637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15126882-2	3.49583366752226	0	1.52930201929678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142919405-3	3.4363010221173	0	1.38946755177661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84739524-1	1.40011007634361	0	1.55583359659184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96629435-1	2.66173722009014	-1.9237218227317	1.42345716216442	-1.35144342510919	0.17655343120792	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03300427768847	0
Merged-chr9-21225343-3	5.78736998972242	0	1.38785763379169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137345924-6	17.5682898108623	1.50136851138941	0.566139167142316	2.65194248786535	0.00800301724522838	0.172770458472347	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37850366884776	3.93160804253422
Merged-chr7-135509441-2	2.65410119400166	0	1.58223870124472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6733366-2	2.42395424204379	0	1.59680475183675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-73637868-1	2.60003812653857	-1.34940540242507	1.37761910884261	-0.979519951315682	0.327323135536384	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr16-3650860-1	1.49244348867771	0	1.67947676203054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140511227-2	6.11845638884832	0	1.36498317185216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34066824-1	4.5881376200476	1.58887927088892	1.02344343684313	1.55248371692129	0.120546525864794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55708081680992	4.214192000796
Merged-chr9-58226520-3	6.56568349690033	0	1.39606269227703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11046259-1	2.01755878341584	0	1.44479180244671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59954902-2	2.74937647723402	0	1.47563944163963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-67573223-1	2.23161561112506	0	1.41821285525051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94227478-4	6.95299306404341	0	1.36174563198223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56732170-1	1.45011323959057	0	1.54888396490018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55485909-4	7.38905325170907	0	1.37767921583489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15269022-3	9.70799488492284	0	1.34635210911717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25436876-4	5.60811149245768	0	1.36424654639274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117891716-7	31.2447530524179	-2.39694974380132	0.603567443036711	-3.97130390556127	7.1480324363069e-05	0.00441545335460462	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09951874329829	1.73423104448184
Merged-chr7-3903883-2	4.90704243158157	0	1.36901997588974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76285663-2	4.44469226728794	0	1.37007111915946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92975506-2	4.16708572928028	0	1.37788435372285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54900086-3	4.97616461142406	0	1.37933530071124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65300885-3	5.2272984333606	0	1.38311853603385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4980389-3	6.25995558110669	0	1.36987109447429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3358132-4	6.0122755269745	0	1.35830587457634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121496723-8	59.2458522435986	-0.760041063138846	0.392968757521276	-1.93410048150633	0.0531007747468144	0.614673129144397	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42056022890182	3.57995974495633
Merged-chr15-73147182-4	8.06060589883562	0	1.37332033644099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31826009-3	8.27293832781204	-4.31128422407657	1.09899265447268	-3.92294180177685	8.74742871220717e-05	0.00526579709154894	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60524550487833	0
Merged-chr1-51648141-3	13.7930131208935	3.64911808816965	1.00116057375402	3.64488792690534	0.000267508350048768	0.0132677795623184	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	3.41258922088083
Merged-chr9-83652947-2	3.68781149051858	0	1.40549233776125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133685970-4	10.2747711536858	0	1.36681875965726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63788269-3	10.2820715371753	-1.00612526238089	0.69731857114467	-1.4428487982606	0.149063069268739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00982473409987	1.50561881865021
Merged-chr12-85543027-3	5.79143565874079	0	1.39238827000406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30626230-4	9.45917904076072	0	1.36700086218672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34494601-4	5.63034203409107	0	1.36903738692537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116124311-3	4.6426654409305	0	1.37430222553206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5334162-5	14.7742459402872	-0.299604023485772	0.480321775175494	-0.623756904163477	0.53278724597603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10019589996674	3.16783602384018
Merged-chr10-63460545-2	4.80711509549115	0	1.43043508566307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117406713-3	5.06491254872378	0	1.40430051760596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34283857-3	10.6541881148536	1.95109110765929	0.717804559019331	2.71813696798595	0.0065650655108577	0.148757980868993	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32643090402693	3.73506089925529
Merged-chr11-65784558-4	8.14233116025379	0	1.36161079557086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73068198-4	9.3289064415498	-2.67778968633183	1.12984488947908	-2.37005071339168	0.0177856455277799	0.297114291716223	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	0.376242425970964
Merged-chr9-35027903-2	5.19621365393382	0	1.37354526261458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50030109-4	9.84676899259097	0	1.36653475362435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128604705-4	6.90332313407132	0	1.35070660930803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83655162-1	4.20710526597316	0	1.39390954444656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67381725-5	14.2522905604644	1.33027023847876	0.747442438420187	1.7797627885439	0.0751147898654221	0.76466220688488	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.58154133456401
Merged-chr6-134002471-2	17.3463075034698	-0.324044990700106	0.670640325808505	-0.483187452692241	0.628962643587896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.035269112763	2.41031217304274
Merged-chr11-97657430-4	11.8742670583322	0.682521873868739	0.68775886315558	0.99238542813856	0.32100954454264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61076849167644	2.62920555715372
Merged-chr6-48601865-16	101.236010094182	-0.0322933754513569	0.251110894098539	-0.128602048777241	0.897672545082577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.92685418998816	5.91118540156034
Merged-chr2-155764855-6	14.7223539652885	0.255695130179306	0.565624022114806	0.452058470259607	0.651226860798457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65626068296354	3.05608631765031
Merged-chr5-121943731-4	15.4811540634282	-1.04115183704334	0.495139131650452	-2.10274601721107	0.0354879771605444	0.472469005748232	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35120714931361	3.25773576813133
Merged-chr17-5560349-3	3.66731360787613	0	1.44682905866185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97469298-1	4.56880392020816	0.314657153761653	1.14845346560204	0.273983372584195	0.78409739966876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.02674429890598
Merged-chr5-118514164-3	9.83766936921019	0	1.41943338834999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70585409-3	9.92417988762608	0	1.3670581594086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12858685-3	6.80792340138948	0	1.3644246878033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21849453-3	11.1034508924653	-0.743422642116727	1.06124929503586	-0.700516500311653	0.483604804256208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45391938817053	0.577068348605183
Merged-chr4-147922960-4	5.47303823920821	0	1.3965045866026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84082255-3	7.08991606208644	0	1.40822181091928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52149626-4	7.39899443460877	0	1.36366072983242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6718358-4	7.29975193489057	0	1.35980979376391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9407194-4	7.05222214142368	0.244363231211517	1.143184691452	0.213756563605783	0.830736899224086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.662147012823607
Merged-chr6-145632435-2	3.48282514137889	0	1.39117275599854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66883828-4	10.1181781853524	0	1.35323111951991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31060651-4	10.6851768626153	0	1.35412345024665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59531458-2	4.05544318490781	0	1.39438262358006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98937899-2	4.1050914291476	0	1.40085990494368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135680879-2	4.08904474550381	0	1.37889214490445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4836987-4	7.92695172158597	0	1.36003618283104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25241092-4	11.0320529122521	0	1.35059740309529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106429844-3	9.47598662026323	0	1.3613666503671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21969477-4	6.86659235401503	0	1.35891445317014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167319397-4	6.81027711288537	0	1.380700247595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67115659-4	13.8120665142851	-1.78466785114168	0.684225575766226	-2.60830333496833	0.00909922813879252	0.188470108472756	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21532663089677	2.68772519508889
Merged-chr16-58509263-4	6.47984774483365	0	1.39265549634765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123831974-6	17.5903977406218	2.15409567745719	0.488159220410853	4.41269075209563	1.02093775258732e-05	0.000899860011904653	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48122800505666	5.15636918497838
Merged-chr8-104115718-2	5.41037863147919	0	1.36302385667001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22117072-2	3.27565361660737	0	1.49775453718531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6330830-3	9.27386315593002	0	1.370807519383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29162988-2	3.83641563742394	-0.061825544786034	1.05599088681243	-0.0585474226701502	0.953312589422241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17564474993106	0.838451940269823
Merged-chr15-67903824-2	4.77191790373255	-0.977702113556681	1.13332992185835	-0.862680932268616	0.38831291889814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	0.577068348605183
Merged-chr13-28457647-2	3.09059397539658	0	1.49548283641096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68692131-1	4.19001725462992	0	1.46258872780524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128078954-8	28.4475819686824	-1.13762616123144	0.414036469218685	-2.74764723836578	0.00600245512698855	0.140853065828587	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56334221478249	3.34550071070071
Merged-chr9-65740795-2	8.30451376835438	-1.45718828924643	0.786977378961149	-1.85162665179778	0.0640794531902448	0.69443680142913	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19402432836736	1.78577981580797
Merged-chr11-26789453-2	3.17097075920982	0	1.39184783248995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57960961-1	4.67201127237636	0.352707114578545	0.977257438020383	0.360915252068092	0.718162801496601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.98766066131115
Merged-chr6-31502873-1	3.02159491335622	0	1.49855411311126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13641413-2	3.00558537786781	0	1.41505051929573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116006947-4	6.73208203267623	0	1.35606893651928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25205518-2	3.21148335459581	0	1.37655557046354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36670015-2	6.63173207636051	0	1.35419172241633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113692793-2	5.8591152289505	0	1.37312703906144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122912229-6	21.6951941770536	0.36844743018091	0.402063164344929	0.91639190767752	0.359461378178509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31875506601964	4.65990557211371
Merged-chr18-10823050-2	8.37658957849822	0	1.38094370886377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33785517-4	6.96598646626653	0	1.36246723310705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38247305-4	7.15858518405926	0	1.35670872604762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97633092-4	5.36079135119505	0	1.3690911328026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73536612-3	4.8065885617312	0	1.37791012758269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28015613-3	6.26992388362393	0	1.35742583108633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121135119-3	8.41147244092188	2.68865401042521	1.14633346396193	2.34543795060535	0.0190047416096154	0.309732659387901	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr12-86803836-4	7.53616359186203	0	1.35678449013574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85534390-4	5.67557748056484	0	1.3688619803716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88861135-4	7.13395115623406	0	1.35286478446126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21704711-2	4.91350336405812	0	1.37960939924365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-34000845-4	7.1002755331353	0	1.38063683168627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126401157-2	4.18968179586448	0	1.36425066871691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50752387-3	8.20052018498667	0	1.34951853641821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133929486-6	23.0983666207157	0.452733331012904	0.534317292240162	0.847311770717336	0.396821367512813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05755118075239	4.54141839825874
Merged-chr19-29816270-6	12.1433758369736	0	1.34649538574515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64256282-3	8.61461930975794	0.248851141370068	0.987491404560362	0.252003349316097	0.801038474954874	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29072512625674	1.43512633765766
Merged-chr1-171038091-2	6.24090926084071	0	1.38251350078724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98831334-2	4.4225924787505	0	1.38960019027945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35544531-4	7.83824922325993	0	1.35866712964858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86547545-3	5.04871378862054	0	1.45447697136291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3102060-1	3.1031811171082	0	1.42462484840476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55766083-3	4.880201223989	0	1.39053534336223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42144211-3	7.14693240190434	0	1.40970683897337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54182063-3	5.57517947971451	0	1.46373696871156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68247356-3	9.66090316459468	-1.46837471706124	0.667661747518851	-2.19927938438585	0.0278580626622915	0.403715390098508	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77830938905399	1.72711687624513
Merged-chr3-132169218-3	7.05368220279584	0	1.35733558174466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108848666-4	17.0243391851769	2.9275851267189	0.640469645702667	4.57099746469173	4.85408155654634e-06	0.000489541779837296	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	4.5179914184191
Merged-chr6-135193173-4	14.7585875920528	-0.608507912157757	0.464230073595989	-1.31078951314845	0.189928886506191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11074741597711	3.3756979614154
Merged-chr12-112630999-1	3.10593046173669	0	1.44168568275157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65128045-2	4.22137851329831	0	1.38854248510837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136761797-4	8.96265573427585	0	1.37112651442647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140619618-3	6.04650494825751	0	1.3578775385589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68220445-3	7.15449851329401	0	1.35606301685707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96126895-3	6.45874613820854	0	1.35909905133429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27405780-3	9.26842507114079	1.18556250193019	0.670602251815456	1.76790712933133	0.0770764307552472	0.776446066159738	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91160626283417	3.33843356270249
Merged-chr8-25012629-5	19.9643293106988	-1.08959277018821	0.791674769103161	-1.37631362361408	0.168724556852634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13939166524368	1.18909650862134
Merged-chr10-50612224-4	8.28174802792663	0	1.36063421559971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60389663-4	8.56026317323603	0	1.36074191333248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47704649-1	7.53616713695012	-0.585418531504228	0.624093785998864	-0.938029739500231	0.348229126988497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51144681212044	2.65973367501489
Merged-chr2-170324929-3	7.65848234112962	0	1.3746000490011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134362802-4	16.4989395434985	2.15090185193554	0.605944029344695	3.54967084049274	0.000385713101419146	0.0176638403370205	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6469783255366	4.58301182274668
Merged-chr2-113449518-6	23.7873173683058	0.377097709185785	0.491127855420051	0.767819835556388	0.442594228452362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17130646544316	3.08896859695644
Merged-chr1-144256694-3	5.0314154157036	0	1.41128660098363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32542345-3	6.34633893719229	0.111060118501416	0.76187299524617	0.14577248333304	0.884100998950062	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63476526644182	2.17597978119962
Merged-chr13-91372046-1	6.22264463212823	0	1.36250680571281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21896531-6	17.6628461329768	-0.194410162902222	0.441301053009423	-0.440538633607272	0.659547037528843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22291078472747	4.31062871452767
Merged-chr15-79946201-8	23.4727847523172	0.0232937984470232	0.350065384729473	0.0665412790385554	0.94694689459376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89683140993362	4.89986940378019
Merged-chr10-23177504-10	24.2972869010972	-0.0823874867052414	0.610768589479611	-0.134891492660809	0.892697665946941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09316302394545	2.74789859950943
Merged-chr12-78894363-5	15.4761213517317	-0.134312537646698	0.531150233708962	-0.252871088296072	0.800367831723686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13105597578932	3.43502641264614
Merged-chr9-90303327-3	6.90444154791734	0	1.35196896818626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150473062-3	9.57524430118922	0	1.35997983519944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5165122-3	7.35826695608021	0	1.3552794646197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31332723-3	8.86824663126333	0	1.36817610327686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24395220-5	20.0038374146121	0.85911254372993	0.351490191065045	2.44420062228976	0.0145173511623362	0.261394068179341	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50381189501533	5.27191060438606
Merged-chr16-28911250-5	12.2901764081596	0.912852693666906	0.610605947151093	1.4949947636868	0.134915808731116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63900399389441	3.32234097792181
Merged-chr4-40174540-7	25.3421322438983	-1.24341783118901	0.460016791574693	-2.70298357356184	0.00687201423859318	0.154170789102636	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21891936760049	2.9109075395108
Merged-chr15-59435894-8	23.6391655516343	-0.0588637452188999	0.420866709391504	-0.139863153595603	0.88876811424416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29194778639953	4.33782634168641
Merged-chr16-39101988-6	17.3615364480305	-1.11823118941108	0.554532849972961	-2.01652830750351	0.0437447612337938	0.538844658034851	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09543826515439	3.00957028592064
Merged-chr9-113026824-4	8.55643342814893	0	1.36771033272086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4907623-4	5.69889562238742	0	1.35085886598783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9879665-8	25.4054312648498	0.166036184838796	0.449324151104227	0.369524283150054	0.711736976607974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7668512965089	3.97262275996509
Merged-chr1-105993499-7	25.2196154476747	-0.229375343278611	0.375103146751262	-0.611499384276598	0.540869025851173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7878612662368	4.50323673368271
Merged-chr2-128803623-7	21.4168796823273	-0.611987113415584	0.451705086556079	-1.3548377727635	0.175469249084286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05460778238123	3.28564062107148
Merged-chr19-11571626-1	4.42771956246374	2.73012475072018	1.21627527931795	2.24466023205795	0.0247899528570121	0.371945086214276	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.60401468765691
Merged-chr15-86182018-2	5.3710853434952	0	1.37910562627558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73208337-2	2.807346193023	0	1.47833390376587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47284236-3	4.99538504323418	0	1.36932485259088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-13421654-1	3.10170767175208	-1.52528136283193	1.23714022160921	-1.23290903988872	0.217609702374296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96695333413634	0.67591700901439
Merged-chr9-7244920-1	2.94474908171064	0	1.41435707711944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41338109-1	4.62361491169621	2.03590312237591	0.937036813463636	2.17270345532152	0.0298026435597826	0.421556570717206	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11812572528152	2.66718105508224
Merged-chr12-54874924-4	9.79292552139566	-1.00591897691548	1.13134844249239	-0.889132772127579	0.373931727940763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.577068348605183
Merged-chr14-118595613-1	1.99059371638483	0	1.51344731923446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58503631-1	3.40344397428535	0	1.38038659124325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145691669-1	1.67962285324272	0	1.46824008991838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59295433-3	3.85338463868852	0	1.39661970057571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74991307-2	4.37293671201843	-2.73316876040368	1.18350092734987	-2.30939300277853	0.0209217829615838	0.33041464265216	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	0
Merged-chr2-165300535-1	2.68067257258417	0	1.40185197184025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47158277-2	4.14553257802375	0	1.3943922177668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83640817-3	9.8358621443961	-0.696275749060663	0.592918299908065	-1.17431988381641	0.240266921845475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39553953094181	3.8795525968746
Merged-chr13-5601819-3	4.12374922657139	0	1.42801013894337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166708691-3	4.99932770357721	0	1.41730033524811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87487657-2	4.487779791789	0	1.39794361376996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13734940-1	2.52391403824728	0	1.40702669231311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-112803768-1	1.76103005950058	0	1.54955160753893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32279701-1	3.369012268262	0	1.49480290618752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-136377963-3	6.45267838998091	0	1.37940957484097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91078683-1	2.76212071881148	0	1.43065531645169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132591723-1	2.49362120176508	0	1.48083913901026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-36971012-1	1.89459579917512	0	1.47773544741838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110972257-1	1.60776496284237	0	1.70286743283594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56022509-3	14.6958715280209	0	1.41271243571134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79351422-1	2.7800105252573	0	1.41838120350827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134703533-2	4.3582880204873	-0.219344760993131	1.13239137837384	-0.193700486582756	0.846410410821803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	1.2636608194585
Merged-chr9-65844666-3	8.05907776319416	0	1.35353851997883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88066834-3	5.80030605256747	0	1.35962284477634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144642148-1	2.70357883546653	0	1.440145939998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102839332-3	10.6207820908083	-0.975471970623623	0.576721738051594	-1.69140836258257	0.0907588362229782	0.855777897353837	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09663270934069	3.23211434677695
Merged-chr13-110896075-4	8.93711888290832	0	1.37293681644164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159924955-4	6.96852432664465	0	1.36463031352666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125726722-4	7.88617965902041	0	1.36482799708757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82919795-3	12.079274273008	-0.81924088141698	0.887640337531802	-0.922942375168511	0.356037236053439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93200840085195	1.62518823153097
Merged-chr5-76430103-2	5.25539573839211	0	1.39630760179019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145211440-4	8.61469137423044	0	1.35661561480271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17217250-8	55.2196078756211	-0.138550052213851	0.280029641764463	-0.494769237073795	0.620763021751464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.37540584963295	6.20219141322326
Merged-chr10-4126580-4	12.1981411849723	-0.526614950127626	0.555273001811514	-0.948389257913864	0.342931326007425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64678338011461	2.60866114396152
Merged-chr8-104436237-4	6.6833172194763	0	1.35441367155003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26322901-4	7.71504651024652	0	1.37046632479982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96890135-4	7.33125912813346	0	1.35297981902612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77116839-5	11.2272213115859	0	1.35677656933915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105899947-4	7.04173293716458	0	1.35167700954617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34856756-2	9.21156240074957	0	1.34956479898492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31373249-2	5.61053464640301	0	1.38839321889361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5162690-3	4.249297649767	0	1.41111394725776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110787497-3	5.70276636973428	0	1.3711920148586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31157145-4	6.76269469671943	0	1.38810537393114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44343883-9	25.535588451795	-0.875678505022758	0.470647845972843	-1.86058113835134	0.0628033504753333	0.686492525334535	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16371883413372	2.70552984523733
Merged-chr17-87098043-5	15.7932387642142	-1.83081852341356	0.662250192586194	-2.76454207776659	0.00570027547818734	0.135816817910921	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97278880394797	2.1160373662446
Merged-chr4-142077582-4	5.26058165444942	0	1.36687701628582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40944258-3	9.28059836208951	0	1.35689217677102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78918398-3	5.88485631623059	0	1.40076491440063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70625279-7	32.2627993860711	0.618663906257396	0.309606410752446	1.99822705464605	0.0456920496872202	0.555405663897049	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24028854456596	5.74017517732624
Merged-chr7-84591525-4	9.93336010627496	0	1.37966007467493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31818247-4	8.98265755796094	-0.565376247997534	0.809805520085329	-0.698162995898028	0.485075265238464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21312207999876	2.00105898665567
Merged-chr4-149781215-5	16.7261721329139	-0.278172796171158	0.575197105829598	-0.483612996922078	0.628660549160069	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52416548764244	2.92151363015263
Merged-chr10-62503342-3	10.5511939186182	0	1.35509935193749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88187928-8	25.3881644228585	-0.303326647057753	0.376067205657428	-0.806575639924486	0.419911013073127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27091219452001	4.94887529140471
Merged-chr2-174344265-6	27.2926926847718	0	1.34646178545079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148688749-3	10.3954398045958	-2.987741472809	0.728141056763663	-4.10324544270101	4.07394653580031e-05	0.00279263127036027	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14649982605074	1.08593863411001
Merged-chr9-16229092-4	6.52582306524549	0	1.36746465726222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127754494-4	13.2429755307932	-1.52074390326472	0.646692146562784	-2.35157317333693	0.0186942123274141	0.30617616387644	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11012492857522	3.0302038378476
Merged-chr1-105169884-4	6.16047800536163	0	1.37286224657964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84634270-8	24.0936817603137	-0.00446285256157952	0.413632531366902	-0.0107894138471929	0.991391460293636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15190639589362	4.1471584221642
Merged-chr2-167694488-3	11.1128990502935	0	1.37975205033686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116020712-3	14.6453199401426	-0.0359035439359432	0.670155925831959	-0.0535749107812052	0.957273846092203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51392635472486	2.48262421441928
Merged-chr2-34958238-3	5.45338057727577	0	1.77459266111249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64661527-3	7.95168884131551	0	1.35469557759284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44401873-4	6.35735180912497	0	1.3822665877727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93901060-3	4.08568324045938	0	1.38223441501533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173733367-3	11.086147265896	-1.45514259503191	0.923215876785692	-1.57616721248144	0.114987272554581	0.990276964014969	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40445353918784	1.17858215524007
Merged-chr1-51789534-4	8.4020483581456	0	1.35713980486047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92253967-1	3.30642688904884	0	1.41347359898929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-138246086-2	5.39445388318912	0	1.40369412350425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-74804284-2	4.99645298945728	0	1.44314963425728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60832885-2	3.33594184948732	0	1.39407491586067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35796224-4	12.5771043954746	-0.0395532712992355	0.514400779780124	-0.0768919349541853	0.938709513527364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61954103847609	4.6318733571541
Merged-chr7-66392622-9	42.0569819292927	-0.241693062317545	0.294951192273728	-0.819434091635213	0.412538790937561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99107014545704	4.85061645100658
Merged-chr8-26917785-4	7.8265447573016	0	1.3826852266723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53149188-2	6.9032983734325	1.95876653343577	1.05087589208115	1.86393707210909	0.0623305418793551	0.683661405573015	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.13750051620966
Merged-chr6-87923854-2	4.79825979275991	0	1.39840724363142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89215905-3	6.79239203171246	0	1.36109623161799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3743264-4	9.82830222395655	0	1.3571175342177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55932019-3	8.33982477855808	0	1.36523835613574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127214390-2	5.29149685364106	0.563953280438725	0.802765282357777	0.702513291036149	0.482359115938774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86076615204117	2.09906462022006
Merged-chr11-77411479-4	5.09985378446396	0	1.40046586478073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21821103-4	15.038263837994	-1.72257655234087	0.92501935211007	-1.86220596186608	0.0625740644078703	0.68495037598619	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96144955975915	0.67591700901439
Merged-chr13-89838822-2	7.15031275165477	-1.94575943372593	0.904308375425702	-2.15165477463367	0.0314245545976666	0.436617608739689	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25979015842504	1.46460328489499
Merged-chr2-45191932-2	3.66200068194172	0	1.3909150140045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45935326-2	6.10288864560223	0.538454244165366	0.777091235575388	0.692909943536647	0.488366069111624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	2.78597213134036
Merged-chr8-117346059-1	3.29037919770478	0	1.42983168102344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79071776-2	4.25835046560788	0	1.40561697182784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34778147-3	11.187825004384	0	1.41908732030281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84961517-4	6.79383386226479	0	1.37266546182422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50345670-2	4.82887415447691	0	1.38667116310323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105155749-2	3.24596593197548	0	1.42901774737478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10904997-1	2.36106171367139	0	1.42430064438962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90247295-1	2.51935208106239	0	1.42808222298147	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132264834-3	7.74447470038619	0	1.38294856328402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-153817434-2	3.75499909633158	-1.92464984140906	1.37355526286695	-1.40121762366651	0.161149005751504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr6-122945034-1	2.04103843359182	0	1.41432365234503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53845343-7	15.6497358309798	0.152028876756604	0.602238804576736	0.252439523327383	0.800701353897803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23314128320855	2.12213451982121
Merged-chr19-21068967-5	36.4959535967536	-0.612515305643135	0.408253590331631	-1.50033048122266	0.133528817487473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43157956029294	3.19054252986586
Merged-chr15-30468481-4	7.48500186044032	0	1.34823676726897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24215080-2	4.50115921862059	0	1.38760100926693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129263296-2	9.43257596267523	2.43716561911377	1.03939416276827	2.34479440660196	0.0190375739555321	0.309732659387901	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	2.44368110782661
Merged-chr9-7603525-3	4.91068661978983	0	1.37015393512955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55106792-3	12.3437218297631	0	1.35442122900856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8497273-4	6.10665324772216	0	1.36604712473547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31395007-4	7.68295098563614	0	1.38171005763161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18048668-12	50.0746319618793	-0.914572851956257	0.350782785644804	-2.60723413286973	0.00912769236237726	0.188730402862862	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27604143001908	4.47166936034472
Merged-chr2-165329965-2	6.41452180613771	0	1.36562935453727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-42190321-2	3.30813839389404	0	1.44586567163667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70528810-3	3.9529290642871	0	1.43457324510457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80131630-3	4.2357355249543	0	1.40041587579093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153797763-1	3.38002638306805	0	1.4142698261258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116231412-3	6.42452470770067	0	1.36732401735831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76780950-3	6.31493033023275	0	1.39694127725709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71537466-3	6.13472049156337	0	1.3678251600178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99211854-3	4.54161978237711	0	1.41449901884534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107259842-1	2.34955877504087	0	1.45647265130566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135294112-3	5.96152561099248	0	1.39246805338937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69923183-4	13.2193011313131	0.585798051479387	0.571623936769034	1.0247962231786	0.305459348867203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24969713319017	3.15139475218535
Merged-chr6-137473137-2	4.84178735663876	0	1.40669073158993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9455758-3	10.7527942455234	0	1.35109831142824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71256965-5	23.4220649723775	-2.83412015367192	0.534086635539399	-5.30648019456546	1.1176229801883e-07	1.89261269719799e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93218901290579	1.4965005622044
Merged-chr4-19872148-4	5.93101932807138	0	1.35946802181567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123151205-8	46.7203495757785	-0.118434323588979	0.353505587513455	-0.3350281516681	0.737603850213589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73594354720761	4.64454153538152
Merged-chr11-115657087-2	5.02607991716546	0	1.39009815392743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59728118-4	12.9573540033713	0	1.34801493335072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102793185-1	3.13153145746777	0	1.37992492423971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80143503-6	15.635870198661	0.175348045674629	0.559030402282315	0.313664596699478	0.753775792409604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96463452331606	3.28200680304959
Merged-chr2-157371937-6	19.6670075757214	0.151944839870117	0.52971152099252	0.286844506582409	0.774231382887738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9258007567184	3.75210929533449
Merged-chr13-119309456-4	7.80756962193163	0	1.40682299279627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33885084-4	6.87980057321179	0	1.37114378555499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88676829-4	14.3520441633469	1.39657727016133	0.700168925494362	1.99462903780722	0.0460833541290191	0.558787652710094	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99708834426639	3.17162729894443
Merged-chr2-167888004-3	7.2050588392866	0	1.35805108738331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56412216-4	6.15287828244598	-0.0357772694169835	1.37465257502668	-0.026026408466364	0.979236274672396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr10-88350028-3	5.58592793746501	0	1.39064050863819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-15061386-2	3.89804223345384	0	1.39525238545458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124278098-2	6.10848030833967	-2.20554623376897	0.914253563489417	-2.41240102510632	0.0158478395978802	0.276201575088545	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25131529750722	1.14143228603163
Merged-chr1-106883772-7	11.4060077870912	0	1.3476669407062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6711264-3	7.13051501204377	0	1.3911134598357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24919870-3	6.04381101605662	0	1.40057771512083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113654239-3	7.82133553386665	-1.90633768157565	0.851529040871643	-2.2387230382939	0.0251739425596538	0.376252500302508	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78236656153271	1.15786140276852
Merged-chr15-101453509-4	7.25635688488823	0	1.34893875981069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128008945-9	33.6849193255446	0.343396993643981	0.291251336018527	1.17904006326047	0.238382223195012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19955918545914	5.52857790369269
Merged-chr11-63135815-3	8.27707178303668	0	1.3544671211524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122830594-4	5.68399953875793	0	1.392064272102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70790057-5	12.2911952799381	-1.31995086457193	1.31419891296525	-1.00437677397989	0.315197040733793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr4-138068300-4	21.8091159900634	2.3248037683182	0.413370445149477	5.62402028397927	1.86563729353355e-08	3.99268415902325e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85560996172457	6.02615363233542
Merged-chr16-90259931-4	8.92228847198017	0	1.3551958449807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70792837-6	22.0106133291477	-2.0080618759046e-05	0.399355669559472	-5.02825433308531e-05	0.999959880335015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10324608068772	4.53161804348408
Merged-chr1-138541724-4	5.99350460828939	0	1.35571076930605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20663180-3	5.17906337917143	0	1.38836698341463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29171253-9	31.9632875079319	-0.680074299430752	0.381850284163119	-1.78099723277995	0.0749129028057672	0.763583439643484	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90115832874871	4.20044906567981
Merged-chr1-120481122-1	2.99971124360396	0	1.54807614195709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132203979-3	4.05761874573301	0	1.38766889816472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34565465-1	4.32617891803946	0.280587032818707	0.97079460275046	0.28902821670387	0.772559784793073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	1.82415053547332
Merged-chr10-127559058-1	6.93795787954663	-2.30780503879693	0.932248281819657	-2.47552619168396	0.0133040003086004	0.245566096018747	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11208997221996	1.55412587431917
Merged-chr8-83106966-2	13.7288704724821	-1.0704464625788	0.669350397272371	-1.59923183274547	0.109769099654982	0.964275773779112	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55298873584557	2.01786586685489
Merged-chr3-101618195-1	3.33462972503378	-0.0340926025205177	1.03745590757563	-0.0328617363606197	0.973784846264884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.14143228603163
Merged-chr2-13479835-1	1.48234421417901	0	1.49893012463955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92066173-1	2.04834623383615	0	1.46449959727179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34229090-4	7.09582373469394	0	1.36116033364559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40851187-3	16.324021905206	0	1.34733417510083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-22006544-2	4.27509803025751	0	1.40307248267349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3951630-4	5.65099671250301	0	1.36537098868471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134701466-1	6.48652035534715	-0.245690459053899	0.820446215087065	-0.29945955570997	0.764589426756865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92717768006747	2.001525184128
Merged-chr9-111064238-1	4.56057735572191	-0.744399248926403	0.821035425090161	-0.906659111383235	0.364587092250346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01874985413151	2.76122525283842
Merged-chr5-88980799-1	2.76747739149976	0	1.46051423724287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181291166-3	10.5298086169954	0	1.34759919122808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38090187-1	5.29652606989949	-0.56171060710757	0.903231023593045	-0.621890294327015	0.534014007517931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21892227282174	2.60866114396152
Merged-chr8-46781260-3	4.09232057364008	0	1.39221791396717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20379764-1	2.22475150878309	0	1.44734089014597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95800803-1	2.238628382655	0	1.45377370949199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27988342-1	1.64797433288257	0	1.54800032526189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11096047-3	5.04648005290011	0	1.5027474504589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74390442-1	3.42787623582922	0	1.41271686199573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121605601-4	5.34518250746417	0	1.37152416530558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23269567-1	2.65960660903626	0	1.40937471201083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5945216-4	10.6911160487281	0	1.34337916199813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6679863-2	6.92245542631775	0	1.36731622993935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57571463-3	8.76302813191034	0	1.35334002730359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135177438-2	7.73746160990444	1.61396781191194	0.961525999824443	1.67854827868058	0.0932401138337634	0.870865867334973	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	2.81411161740582
Merged-chr7-114527970-1	3.06931380365692	0	1.42279527143802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159733114-1	2.93479549308289	-3.11507049140131	1.30796235550009	-2.38162090697961	0.0172366313820513	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	0
Merged-chr6-115315991-3	4.17022423384405	0	1.4242364942006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83518450-5	29.5094862876036	-0.688254368710485	0.34356377575268	-2.00327979049205	0.04514726543973	0.550630514255841	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01786740728402	4.39922929086347
Merged-chr14-103155900-1	2.00755074584891	0	1.59651446439263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124874975-1	3.189444128593	0	1.47509388338045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39490434-1	2.54169251307606	0	1.44053699298751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83149814-3	4.62044309115899	0	1.52567445703652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89830481-1	1.83411181455344	0	1.45369660957231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72132936-3	9.20588274463552	0	1.39492943035318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75635837-4	8.58179395517264	0	1.35309425550635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-47550981-1	4.11055997267324	-0.500270903094475	0.75489440593635	-0.662703153130342	0.507520689953436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45608062929706	3.43701022541903
Merged-chr1-174121327-3	6.1287338472895	1.80075970403746	1.28446517120311	1.40195292516243	0.160929304507429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr8-71665739-6	22.2848438116493	-0.627262822255278	0.417861190310335	-1.50112725661224	0.133322650196629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51276762539538	3.55828101985258
Merged-chr6-143139663-4	7.15803355206796	0	1.37422611849816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154597670-8	25.9716994278702	0.0610308681819686	0.423400969329882	0.144144375197256	0.885386464250056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40258509265732	4.27832098928243
Merged-chr13-111968342-2	9.00200387162884	0.266852588915206	0.713889226692065	0.373801114987708	0.70855228989727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16286647593625	2.5810386888589
Merged-chrX-113785515-6	16.4472140395276	-5.29256457887346	1.02736809101392	-5.15157578395313	2.58306803670203e-07	3.90036098353015e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89990859594029	0
Merged-chr2-126602420-4	7.6659660111092	0	1.36520989019934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84778137-4	5.62772857226314	0	1.37957291389514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150625602-4	6.9588565581531	0	1.35852808395973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94919584-6	16.0018468933199	0	1.34995928865488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48414308-2	4.9434462859727	1.31122392643059	1.0410193799191	1.2595576525506	0.207828980163407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.79305269258721
Merged-chr10-6712471-4	7.43823539317509	0	1.36063872113802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20969156-3	6.43383036169274	0	1.3709643892219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167388643-4	10.4156084740893	0	1.37899003698337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83565058-2	3.71635417451308	0	1.38198376132028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108641553-2	6.66473688877179	0	1.35269605609903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182707670-4	6.99565989618273	0	1.3686592331481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68140269-2	7.91206678804747	-0.0021584091313979	0.80789793907678	-0.00267163589235592	0.997868345505233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53308279668795	2.44041055281246
Merged-chr14-61083848-2	5.38201475539048	0	1.40570207805883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11999441-2	4.63490306302503	0	1.38491603199135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-60021804-4	5.85419344558275	0	1.38003655133485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133526509-3	8.12262199732744	0	1.34711360203251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110475102-5	14.6662872898606	-0.037618289760643	0.6798703742683	-0.0553315619924299	0.955874317839661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43049365066179	2.40373656850996
Merged-chr13-73822373-4	5.24839290106459	0	1.38845811173787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25396192-1	6.0283084576543	0.693800134675495	0.969702668912489	0.715477183798601	0.474314234406252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73112505087616	2.40248875752882
Merged-chr4-134307687-5	13.8192380000852	0.177459938555223	0.498158047379019	0.356232202789659	0.721666677358955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37328213657593	3.36195752830239
Merged-chr16-85117668-4	10.8971878334935	-0.626855515282896	0.879107831112742	-0.7130587319299	0.475809414676904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86170925882537	1.55412587431917
Merged-chr3-152149521-4	8.69721030953381	0	1.3580678504441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7865946-3	5.3889356658376	0	1.39514704894992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20820238-3	4.8953750333775	0	1.37795866956404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30787697-2	7.67257934473316	0.750394740435984	0.926782171913906	0.809677573842769	0.418125510438755	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.48988962528534
Merged-chr1-62706440-4	8.94882925305761	0	1.35285184802618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-16025190-2	4.54704433056895	0	1.37203007650539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31944175-4	6.28881724710879	0	1.36175934386757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8682230-4	6.61837339441282	0	1.38473500137023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10668320-1	3.17318220216627	0	1.49155020307844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8867517-4	8.43053705595406	0	1.36043787414165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89463330-3	4.7495460190238	0	1.36459527939946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131379142-4	9.32530648845573	0	1.35124562313714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165985606-7	19.9317445356082	0.260728243194764	0.445339832163217	0.585459068254213	0.558239081335011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09171983474674	5.22418938400816
Merged-chr3-51359169-6	14.338441433577	0	1.34419215993358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26953161-1	2.43382358045896	0	1.55325796891289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10566682-1	2.15249420238421	0	1.45091989330381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17165166-3	3.62847137431494	0	1.43640553837163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34682772-1	3.89259247046836	-1.35470918439035	1.41618326841133	-0.956591717052311	0.338773371172448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr13-81761925-1	3.16771635602142	0	1.3759564529703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150397454-4	7.50720185960149	0.922725166063042	0.934266333577796	0.987646812156276	0.323325651581809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	2.00425570563599
Merged-chr3-98051892-1	3.48062117365778	0	1.3870025214159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58818696-4	6.78704376909239	0	1.35388414099957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72154171-3	5.88365503948995	0	1.41596181536958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9028107-8	21.8148390233903	-0.141544288611858	0.472684155031739	-0.299447923322825	0.764598301111179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18275990054545	3.69749962977762
Merged-chr3-101594444-4	6.2670816314633	0	1.37699990844351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21221724-4	6.27944909899073	0	1.35230446991866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93105549-2	5.64384436469725	-0.34078004700991	1.11663262217511	-0.305185465875157	0.760224901275562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0.67591700901439
Merged-chr16-94223325-7	22.3208707749986	0	1.33901879119954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137953602-8	22.6462119384975	0.0672079549146136	0.377208616789321	0.178171844234806	0.858588020954311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02339523320091	4.76759657521511
Merged-chr13-95799552-7	23.3670128592651	-0.314758889009651	0.46142398812863	-0.682146782802081	0.495146141218914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12204834592896	3.79817046189288
Merged-chr4-149650650-4	6.85010738301922	0	1.3486028113744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65682034-2	7.00808052988388	-0.572172592519203	0.846666739856652	-0.675794342194281	0.499171227373317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64109723835872	1.35418021299255
Merged-chr14-75060747-4	5.72968771845305	0	1.35356998596585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67607595-7	21.3555896557913	0.161637830467309	0.433635133680958	0.372750771126936	0.709333945328916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01492716769024	3.63119712032446
Merged-chr10-111455097-4	5.79760502806182	0	1.37953639291866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54493787-6	26.4317082211696	0.705979359388241	0.459961173279285	1.5348672896779	0.124816429812925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22235228999883	4.93250590957805
Merged-chr13-99306381-4	6.32669873918012	0	1.36492509846968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54935125-2	2.61883843338202	0	1.46065516485871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120969701-3	6.27527442251437	0	1.38493391648405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159738857-3	5.8426044021536	0	1.38554838399083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70958423-1	2.59164917347149	0	1.41691053809008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145517559-2	4.02004974696676	0	1.41167324445196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32176140-1	2.71817578665825	0	1.44177549399757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68135584-3	9.92483544758845	-0.33637010394543	0.705429550864089	-0.476830185995762	0.633483048799221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49756168783462	2.3873276010566
Merged-chr6-94254184-1	1.83354058589945	0	1.48591456077542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73324905-3	7.34184871087749	-1.50656483372153	1.00034379473616	-1.50604706266897	0.132055092651542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03056478861164	0.723581231604105
Merged-chr4-139288259-1	2.37538707910543	0	1.44101003428142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68092144-2	4.23331178798137	0	1.47206930150204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40681299-4	6.76720570715274	0	1.35234516074167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83600144-3	5.50373301386251	0	1.36155295376539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103403881-9	33.8774382210836	0.10188790831232	0.401588503941327	0.253712213652425	0.799717897609662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12550889905939	4.595488804145
Merged-chr2-19580732-4	5.96888189478384	0	1.35700534786833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32400090-4	6.52536935503804	0	1.36016044763784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149858754-5	11.7822739717823	-0.943529948733451	0.99958992145692	-0.943917028853431	0.345212049309077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.67591700901439
Merged-chr6-115697879-3	7.47513858092231	0	1.36494859513318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10359025-3	7.35353298716363	0	1.3741294813472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121000768-6	22.6255650747042	0.222225486103199	0.454392137752832	0.489061028217172	0.624798491278256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57108771091033	3.89141026688827
Merged-chr4-83235110-3	14.645453552503	0.883336327105038	0.50873097183863	1.73635256354164	0.082501514370808	0.809366507793314	C57BL6J_F1_Control-BALBCJ_F1_Control	3.609443221672	4.20423537178437
Merged-chr10-21696868-4	5.58014844260075	0	1.39569109964866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59056631-4	6.68965753756562	0	1.36353785247061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107810234-2	4.81092091357513	0	1.38474950915847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59637199-4	5.32819799998374	0	1.3605300249488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3956629-1	3.60794378277696	0	1.37031019337839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121464740-6	14.7575946784532	1.09068277049923	0.710577118017955	1.53492526404666	0.124802186944041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	2.74772071588831
Merged-chr15-78851983-7	21.2410496317082	0.808650531576783	0.349283496916176	2.31516959351461	0.0206036526004282	0.327125174425499	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11764658356694	4.87471120783498
Merged-chr7-100530986-6	20.555677578315	-0.196400936929654	0.508176103485128	-0.386482039558166	0.699139701656073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60410497958814	3.38213260377092
Merged-chr8-108971507-3	5.94492586016924	0	1.40835859716918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58818225-4	5.4333590146346	0	1.39378616928218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18595044-1	2.55040038903281	0	1.43744524643765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38112779-4	10.6469611478314	0	1.356796048409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49553842-3	7.18352531090645	0	1.37120522786771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89695489-1	5.41835083610835	-1.68137663640779	1.03619026068242	-1.62265242224963	0.104663727430872	0.938382906055543	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59225717122037	0.903978167044898
Merged-chr15-58020278-3	8.17023657044718	0	1.36210457513851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41463160-1	2.43913925720825	0	1.63351620383086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44389754-3	6.32681023824652	1.27546480725938	1.35887007822258	0.938621600181014	0.347925058677029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr4-126051829-4	6.43503661381046	0	1.36986789316456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99976550-4	9.47027800599624	-1.13851168563253	0.787369591177151	-1.44596857484731	0.148186016173509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51189205336242	1.14143228603163
Merged-chr13-36314480-4	6.74248490513916	-0.452894167640683	0.856415420688286	-0.528825330207973	0.596926624380284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81683205337095	1.39949824061849
Merged-chr5-24046783-5	11.6551975361245	0.966279081633668	0.753763541306687	1.28193926699953	0.199863951887343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93051054667104	2.06452576656352
Merged-chr12-86893880-4	6.02144233807167	0	1.36133400815001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-89117469-4	7.80651495822863	0	1.35677265437202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52284429-2	3.86646118379649	0	1.43385898875643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44126660-4	5.85154650691034	0	1.40818243190426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136087544-4	6.17013105930029	0	1.37842361141242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8353904-3	17.5219194687075	0	1.37651458729907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79721491-3	6.78154494569607	0	1.36444101559858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91852933-4	7.93366945440582	0	1.36474102148538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7850817-4	8.51468857162059	-0.868365729482665	0.820339798314761	-1.05854394882043	0.289807525400152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28989570630184	1.4994506617149
Merged-chr13-107844642-4	6.19894014390175	0.365469110827888	0.909776987537266	0.401712854726299	0.687895362979371	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.28728541095094
Merged-chr2-130728318-7	28.6426548144813	-0.261515996211153	0.377096925885929	-0.693498085662627	0.487997026776615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23293310271331	3.8958484114459
Merged-chr16-62782408-2	3.83237628679712	0	1.4256067080166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121460697-7	17.5624099371625	-0.449748350592096	0.529266073395041	-0.849758511266613	0.39545936046064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0204904562605	3.57484572210074
Merged-chr19-3899148-3	6.73813731967125	0	1.36584407452672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156002032-5	13.5227726477927	1.01481802882747	0.450654833995233	2.25187427777198	0.0243302180516231	0.367757178418315	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49584339212877	4.47074157722865
Merged-chr13-9388198-4	7.2919705445684	0	1.36457872900457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67170439-4	7.62073661880929	0	1.34978559261002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43322242-2	4.84165642026519	0	1.41677799317958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-18957483-3	4.33224659174163	0	1.38780621531322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99185532-3	8.47716397442688	-0.21404904556399	0.668640706361248	-0.320125657214093	0.748873076628773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12394113821961	3.01091647595868
Merged-chr19-12441659-5	17.7139302042315	1.14625174827742	0.404047774560762	2.83692132576031	0.00455508346805877	0.115274572737526	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83887106305462	5.3740113289811
Merged-chr1-153518779-2	6.65466524252606	0	1.38134375649677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86283801-4	15.7976434500994	-0.55948378183092	0.55745080175406	-1.00364692286828	0.315548828940242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02948486174469	3.26239073877828
Merged-chr13-54824858-4	13.6328413657563	-1.03057741208164	0.644573948555414	-1.59885054987301	0.109853813905806	0.9646524024714	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82925595730773	2.13118170172995
Merged-chr3-144628827-4	11.6214055821597	0	1.37073003582402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86689645-10	30.5013239440235	-0.97324425938366	0.567341991516653	-1.71544548779463	0.0862635816511897	0.829395559909843	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51617517296867	2.28731496234815
Merged-chr14-120285325-4	8.00286240697903	0.244163774525717	0.984230523533445	0.248075800015991	0.804075759255375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.39293125551424
Merged-chr1-119893529-1	1.48094552220186	0	1.60926667538453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48001985-1	2.31561791032024	0	1.47783567039161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43868608-1	2.15780038285879	0	1.49707562597993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68905574-2	4.52649146511729	0	1.43864786494313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32693630-1	2.16136819278053	0	1.47602045220189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80953374-1	4.18354074473378	0.154418568804467	0.872936040468661	0.176895627681454	0.859590373067309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57368172511798	3.17597560720118
Merged-chr2-74606290-1	1.54312670011204	0	1.56714241055814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34044022-1	1.56656140402802	0	1.79492118418093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74485603-3	4.81497983187763	0	1.4401662931339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41466377-2	5.24326212315422	0	1.38476699348579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-59248680-1	1.4568653017118	0	1.70550014104893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17539523-1	2.65324869488619	0	1.50259449088487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123423528-1	2.13867345350772	0	1.49404178757517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95676589-1	2.18528626334915	0	1.52043606941665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-17788427-1	1.49721666437188	0	1.57202583747794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44979295-1	2.43721493750868	0	1.48675269928107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27401334-1	2.40999572066848	0	1.44461904431688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65728114-2	2.50080799495416	0	1.6723282583686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75614932-1	4.12273550856608	1.16031203719968	1.27143397094181	0.912601097436611	0.36145237693969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.45526469271556
Merged-chr18-10052404-1	2.09958096972156	0	1.48161188717299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128600635-1	4.17009088818947	0.323257781455178	0.874585155540288	0.369612700841556	0.711671086370325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.25156707489019
Merged-chrX-129680760-1	1.58962410956896	0	1.74685352324867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102371231-1	3.72402562369997	0	1.39412029000884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110564027-1	4.06193738999226	0.57274120172028	1.41167665568585	0.405716988669774	0.684950558181057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.679405493272835
Merged-chr4-105261429-2	3.45748424819313	0	1.47213364298931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45245061-2	4.27499442346155	0	1.40279879158489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4066674-3	9.42525575948798	0	1.35224854722729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131079109-2	4.42175668946462	0	1.46549774465243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50998574-1	3.4419937173768	-1.71480246222847	1.36903975822599	-1.2525585556774	0.210366405623597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr11-77446757-3	9.76631524015617	0	1.35528070437626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105649990-11	38.133242031313	0.97892500150353	0.369726787203705	2.64769834208464	0.00810418042960125	0.174308368831057	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71854737916031	5.6878650374492
Merged-chr4-55472805-7	18.8207947417246	-0.126348320106051	0.457689786363898	-0.276056673909683	0.782504537259197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65970409235354	4.47693795555137
Merged-chr11-77508237-3	5.4355863200677	0	1.35787597639291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83585491-3	5.66599877398269	0	1.38225526389632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88584632-3	6.59781888752406	0	1.36618883750169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85506951-3	9.25373875755138	0	1.36132803883636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5728340-2	5.84934535470666	0	1.41346689431786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64096278-4	10.5317595049274	-1.52826658925429	0.97048091079079	-1.5747518289762	0.11531373934254	0.992037636617138	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49705754145624	0.723581231604105
Merged-chr6-137395244-4	5.31551537959371	0	1.36205192055697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130750691-3	7.80271971314038	2.18075153122596	0.933517909473449	2.33605751865651	0.0194882439626357	0.314443886484095	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11145969726662	2.79941410944385
Merged-chr2-143093896-4	10.1228941595206	0	1.36177666560206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57417376-4	5.9350742446371	0	1.36129268492163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-163899815-2	4.59501139406223	0	1.37502441731452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117110628-3	6.10878007550641	0	1.38965096930799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95840352-2	7.61498364019265	-0.213561803136051	0.950342281578593	-0.224720931895514	0.822196379756749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	1.28728541095094
Merged-chr6-134122045-2	7.6766071450346	2.98917431765059	1.02957671683832	2.90330411397599	0.00369247883615166	0.0993169010659911	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	3.04812421070564
Merged-chr11-58275962-2	7.45138927969435	0.795710412205578	0.690781767191294	1.1518983997521	0.249362825904333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80689471818942	2.90278119613826
Merged-chr16-30772993-3	7.39853894083335	0	1.37381498548348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34089221-5	17.056186732652	0.142370851897101	0.441397349390875	0.322545778975727	0.747039262611803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24648204358449	4.34014013885122
Merged-chr18-61040038-5	11.4813437115505	-0.69109228150878	0.555766899211215	-1.24349305885188	0.213686197185951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98166973010223	3.26037325516087
Merged-chr8-33443768-7	28.3748384834153	1.43330208540536	0.351746059868939	4.07482058488276	4.60498359301204e-05	0.00309421882734909	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76559169829301	6.210368116259
Merged-chr8-56305389-3	5.95147632407626	-0.695437063768586	1.37266760413172	-0.50663180341353	0.612413189034362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr8-13648493-6	19.3392327929921	0.390339027881921	0.522024013877276	0.747741516683726	0.454616083998854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14181421519575	3.38234488710462
Merged-chr19-17124397-3	10.8930716127378	-1.26739734360973	0.881026096039606	-1.43854688221716	0.15027894533393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77979544312931	1.66784418339515
Merged-chr12-101740674-2	5.60726614962712	-0.566464713192983	0.711132655908609	-0.796566869045291	0.425702625361678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31108014808538	1.82190623236164
Merged-chr1-136579574-4	6.31288277811772	0	1.36193215518238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73691332-4	7.03045766065723	0	1.36467273051956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32494632-2	4.68045394359318	0	1.36974312146374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60455490-2	4.85971971884705	0.516518543456166	1.01709321451135	0.507837960264361	0.611566985921243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66069583796294	2.77313812188385
Merged-chr1-92666304-3	3.97169116777494	0	1.40060458805078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8135398-7	28.040553921475	0.95758212742048	0.349833405597926	2.73725182357529	0.00619548469834488	0.143322637920367	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10675718452212	5.13107735283854
Merged-chr3-65950118-13	34.3899174796791	0.638940530198021	0.35901264507932	1.77971594860357	0.0751224590385394	0.76466220688488	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54342238895105	5.08730685626004
Merged-chr4-136163696-7	20.9786088895151	-0.186157446169641	0.419463477519573	-0.443798938754934	0.657187955746883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02638929808815	4.84453979825562
Merged-chr8-121861506-4	13.5988523968761	0.703554548554722	0.561993890374501	1.2518900304875	0.210609937999653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75255921623828	4.58871497010463
Merged-chr4-56831211-3	5.9918764407112	0	1.41473851067204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36285170-1	5.08900577632022	0	1.37212199189509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99782144-4	8.30620486688855	0.298605576335631	0.790783689236339	0.377607151487905	0.705722451263648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	1.60650301571838
Merged-chr9-120051810-3	11.8080995951238	-0.283736822590074	0.581179677656188	-0.488208437938407	0.625402208417366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15199539558998	2.89134706307792
Merged-chr15-41657278-1	3.2750088812183	0	1.40236108690018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57577478-1	4.24923838085191	0	1.40778092987426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-42181841-1	2.67238246525666	0	1.45029488112334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10390580-2	8.3047638457348	0	1.35121958135356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30699949-4	8.15945574260213	0	1.36078198170086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61789176-5	18.1085868242038	2.1580550805421	0.598249108702413	3.60728507431104	0.000309417650374611	0.0149673211370517	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54314374101268	5.11040381004063
Merged-chr18-10869610-4	5.09427777476907	0	1.35607728920189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53540055-5	20.1888115825069	-1.32733720618216	0.582479130334734	-2.27877212599768	0.0226806146791046	0.351542111962174	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42135453372755	2.89451696063341
Merged-chr2-117780501-7	23.3925931203401	0.741769044161039	0.460339438795967	1.61135236663876	0.10710294303381	0.951769486542831	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06066963943916	3.77239047108142
Merged-chr11-64610822-9	27.0968474617347	-0.0145565321388133	0.397337205392131	-0.0366352104491386	0.970775868486423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76385141171648	4.69790730355573
Merged-chr10-111977777-4	5.99854748976971	0	1.36355775643357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22000781-4	10.5589704997335	0	1.35221888364224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51756067-4	14.4571105160348	0	1.39228234662437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52850566-7	17.503748538047	1.3514973091878	0.559240512157691	2.41666560237809	0.0156633994359734	0.274217948450911	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09032553771468	3.69580612506373
Merged-chr11-31902482-6	16.6011762085595	-0.469352983214219	0.444522908911128	-1.05585780576284	0.291033183828834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26185472223806	3.80572096435088
Merged-chr7-80628900-7	19.8029657256307	-0.65942486403318	0.449652125522096	-1.46652228824119	0.14250605373765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38355191106216	3.51630010651592
Merged-chr3-107771430-2	3.2023053905092	0	1.39488543611888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151953747-4	5.99011529252595	0	1.38751683305045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119955635-2	4.66332729071498	0	1.3826373866343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27354955-2	7.59604744440243	0	1.34867241676614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127540611-2	14.3407096643752	0.131406904585994	0.671758797272991	0.195616202005006	0.844910577915297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90052965671456	4.38423722143245
Merged-chr12-111696513-4	7.66161327535029	0	1.35748242160181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85480819-2	3.92855761086593	0	1.56303836507833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123027753-2	5.1205415602441	0	1.3859805126398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102283808-1	3.7065355212367	0	1.37562097668165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137541413-1	2.64606087068694	0	1.45687529721346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91063342-4	9.45377433857553	0	1.34868887225666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43360554-1	3.55632804366387	0	1.39748299765115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17718021-4	6.19997724536538	0	1.37685693066172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-71262618-3	5.33329874297056	0	1.37049273622942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36816262-4	9.014354444932	0	1.40293821752887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20088029-4	6.03999947304563	0	1.35595050619109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30981860-3	4.62132094826196	0	1.38281736708779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98805563-3	6.36615424841195	0	1.37987571028123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-13152377-3	13.2712292634226	-0.913374144311418	0.585632297944898	-1.55963758747021	0.118845548770523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43880202201474	3.18294030132141
Merged-chr9-60744624-4	8.49950582588093	0	1.36070273460055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55430158-3	5.99661861764222	0	1.37129935029398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173224269-4	5.64441403504757	0	1.37108367823457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98846468-4	6.93275497054945	0	1.38609400954804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121845546-2	4.29614355890574	0	1.39257693099265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82820922-2	5.48872591972293	0	1.37083055712317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149221621-4	8.99824988540761	0	1.36592112335703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47256123-4	8.1699475712596	0	1.36005514515996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59317611-5	12.5879845191897	1.84145032930879	1.12119222573025	1.64240376186111	0.100506355842002	0.914209144387675	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.46460328489499
Merged-chr18-77805664-3	5.13101593604371	0	1.35887090923376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155596597-5	13.5683437418327	-2.29620322138182	0.577140230490093	-3.9785880451133	6.93257391834836e-05	0.0043019153610445	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60792849238363	2.28733524435458
Merged-chr11-109269857-4	12.9291906793336	-0.515284580106912	0.642883568995696	-0.801520842898324	0.422830182644093	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37233207268852	2.20727117605912
Merged-chr3-109273331-6	18.5176180698166	0.779036405116489	0.831029421225317	0.937435408686053	0.348534634249485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46261730325446	1.99441831862226
Merged-chr12-32656246-2	3.95316742931801	0	1.41110597615997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106241664-2	3.55167960942148	0	1.4022188425349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134703710-1	3.51966794096376	0	1.49290693605044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60707677-1	3.10589714646679	0	1.47341526894363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-14505001-1	3.62553845354626	0	1.39061972793706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154285541-3	6.33632319607859	0	1.36599433679057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-3976437-1	2.11750611342125	0	1.55808649673494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92332546-1	4.59795744172178	-1.20861024838714	1.04985909095346	-1.15121187100404	0.249645082660469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85351455322964	1.38572824442771
Merged-chr13-49252920-3	4.56757670722211	0	1.38835135788187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108576870-3	5.3797020892225	0	1.40057503405446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100528599-3	4.26242496381013	0	1.38600512222793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133680354-3	7.71737040986546	0	1.40102198242015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165874856-7	27.4993883799642	0.474736478068365	0.337288096582591	1.40751032389937	0.159276118107587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48692994535958	4.93466615789986
Merged-chr3-52844222-3	6.56136530453445	2.05992197538956	0.91184477743244	2.25907087080091	0.0238789767636061	0.363495185980616	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.28015692214866
Merged-chr2-35506808-3	6.49829802279753	0	1.37559131594762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31905989-4	10.707946798925	0	1.35388660227437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-56305094-2	4.06340209155797	0	1.3794594975489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14706609-2	5.89439442825398	1.48081751700993	1.15887514384054	1.27780591798912	0.201317867227358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.40024388691264
Merged-chr11-43470346-1	2.50662705571574	0	1.4332742945373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55101338-4	6.47711497397657	0	1.36576472358297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77358833-4	5.85579662672297	0	1.38186156103154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-162653723-2	2.8799868581809	0	1.49556708474916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-136065852-2	3.22983621522657	0	1.51060724421115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-127015785-4	9.34698461773184	0	1.35758581313244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37318043-3	5.39055180401169	0	1.37234787213921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25091838-3	19.3309345704763	-0.348498948139523	0.499711102945314	-0.697400850382268	0.485551969514299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.50967781424006	5.03007854261852
Merged-chr13-20180740-11	33.9709542601125	0.336666906243925	0.397994397172395	0.845908657598752	0.397603702405064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81953378745931	4.2645860171991
Merged-chr11-95333446-4	5.86613596742551	0	1.35905723829446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93423803-1	5.72713541874789	-1.39992074092114	0.847220725053031	-1.65236838467745	0.0984594764144125	0.901795902006917	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0451916841249	1.40024388691264
Merged-chr10-60269832-4	8.36114279900698	0	1.34937881518592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41455185-4	7.94580019523188	0	1.35293414408234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33952260-4	5.7019342573705	0	1.38349864163188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101715849-4	8.3429812708288	0.0197848148963662	0.864516117694255	0.0228854205160849	0.981741670093785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.44790810950236
Merged-chr2-31084645-3	7.31400658138382	0	1.36383435726011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119917173-2	6.62767194217052	0	1.38633155506637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52377982-2	5.18733070704131	0	1.38976053325922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9128514-4	9.52793233349468	0	1.34622519337952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114926965-4	8.83912835658059	0	1.35156062210035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82039041-6	15.3172521497898	0	1.34208045597986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-23180253-3	4.75416818992273	0	1.4007865880404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15262003-2	6.70205733376193	0.96810173876311	1.07223419948297	0.902882727700653	0.366588138533051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.44790810950236
Merged-chr15-62162141-4	5.9117757337427	0	1.37958056918438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38321599-4	7.25929199568153	0	1.37424263938163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126136893-4	8.81663133992145	0	1.35685311918109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92008809-3	8.87896793098109	-0.0352663119539992	0.789853294686752	-0.0446491926934172	0.964386931631721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76901627090616	1.74571508595899
Merged-chr4-42987581-3	5.12814563191082	0	1.3781884395034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47221697-2	6.44485750058009	0	1.36006863381043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134727240-4	7.15538360305249	0	1.36453592611952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38442909-7	16.5568878512244	0.12830058276044	0.558306572425869	0.2298031029851	0.818244773416764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90535044852059	2.80164640192351
Merged-chr12-111386695-4	7.40436523130698	0	1.35196595960421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35288305-5	10.1669209050482	-0.39442971133485	0.776862721122841	-0.507721249340887	0.611648844140832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20522870892236	1.34263109599227
Merged-chr15-12306299-1	1.64390069601878	0	1.53086804006618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51850359-1	3.28453138283211	0	1.432641845536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115858985-1	1.70655046334235	0	1.56703689557292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64036470-2	4.82609796684383	0	1.38740967090677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73744613-1	4.51938225984299	0.0260002615289924	0.963555447439819	0.0269836692824222	0.978472759314144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	2.28966581249056
Merged-chr10-89741162-6	18.3380610610233	-1.18704991541222	0.647574937492394	-1.83306957494192	0.0667922250344485	0.711996830874551	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19365296885894	1.41478649953382
Merged-chr1-105865748-3	6.05762466215287	0	1.41141091530807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33159565-3	3.98495043353291	0	1.40882357120203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167106111-1	3.29500199598783	0	1.4435048624643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38424627-1	1.9207051306587	0	1.43613043235658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-15984375-3	10.5379069104987	0	1.36329633981382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60833995-1	3.17330021402804	2.76661223058121	1.39056410372343	1.98956108759978	0.046639306246647	0.563267284661516	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	3.82365563684869
Merged-chr17-83304622-1	1.99268633158275	0	1.63896705071079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102104679-2	3.41663301863773	0	1.42267321099905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150730431-3	8.55272397582339	0	1.35695084334073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99956598-2	3.51579392712774	0	1.3946757077943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125727111-1	5.34547150562184	0	1.38018912437288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133844377-1	3.11231379603425	-0.468359607714419	1.0369563077713	-0.451667639421616	0.651508434254629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36759862365701	1.27992882773773
Merged-chr6-93122862-2	4.95155200382816	0	1.37807761300902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-65475937-3	6.05995227715054	0	1.37987691688864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45036773-3	5.55111153795227	0	1.36956751196218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8115986-2	5.70719950293794	0	1.37875066656141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88600290-3	6.73281304228829	0	1.41590305492504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77395519-1	2.0726750961586	0	1.54274592458806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29641644-3	4.29182208869055	0	1.3685537494837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184085142-2	2.40424194136131	0	1.52150428464008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54762862-2	5.92053419259191	0	1.38041769296774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45545159-4	5.50226752046298	0	1.36436563966457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37185596-4	8.64975820727513	0.854406731203916	1.21550260007417	0.702924642984539	0.48210271283231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.13759034240505
Merged-chr10-57463520-3	6.24442562001869	0	1.36945678690291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66190497-4	7.91123373403809	0	1.37008813544652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89265694-3	7.89908860019944	-0.795983446014145	0.780509606762749	-1.01982530274749	0.307811320728289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49952550894788	1.67279875369265
Merged-chr11-120355194-3	6.84569336328644	0	1.36334292463385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91987741-2	4.37428615884543	0	1.3925007518736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41019939-5	18.884031194838	0.64298859536504	0.483522201133151	1.32980159723416	0.183583649555968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24342239095198	3.95053756157766
Merged-chr6-108701997-3	8.93330593165754	1.35579393063543	0.709128125037326	1.91191673657572	0.0558868746168045	0.637313623543468	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	3.39639870442597
Merged-chr11-17727811-4	16.8706396053398	-0.788654693226085	0.477418546004654	-1.65191465607286	0.0985519499121544	0.902186838207275	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89460763921674	4.17524930846084
Merged-chr11-8628927-2	7.18170588272438	0	1.38613418864989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-153716929-2	4.14624831997144	0	1.39818970788638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102347561-4	8.87398176727528	0	1.36111985781522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17505364-2	4.72368658354858	-1.90345126277924	1.33841702594229	-1.42216605578456	0.154978050299315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr2-158864050-2	3.37852998145257	0	1.41077752319698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80329822-3	3.75476610961145	0	1.40209167775057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64413468-3	5.70669664849537	0	1.37774014369393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94639458-1	2.89207553648198	0	1.40633478662616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122593527-4	7.45662404142319	0	1.3553540244135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33337297-4	6.87418180864903	0	1.36267692401273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73120168-3	5.25476662188115	0	1.38502231902431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76916748-5	14.6329321316294	-0.985079990411	0.780201979613049	-1.26259611760991	0.206734363861549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15820604725476	0.948471875794396
Merged-chr11-40855969-3	6.31020485894998	0	1.37239719388022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17000546-2	5.29393111624131	0	1.38599727054035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90603542-2	5.14725127798439	0	1.37776299050498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73173862-4	10.9615447177591	0	1.36007609004714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50994298-4	5.98761748011857	0	1.36618910548744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96621885-4	7.22634560847938	0	1.38561672881025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76014298-4	16.3561196808595	3.75340106246136	0.974549544365641	3.85142149433207	0.000117434177357476	0.00671251782016304	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03300427768847	3.40219160758557
Merged-chr5-135951189-4	5.22287900069141	0	1.37552641060664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9751698-4	6.77235866496767	0	1.37941070255874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122463933-5	19.2661740832951	0.743681602647012	0.723054911853017	1.02852714289864	0.303701929701061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.67898613390668
Merged-chr10-100882300-2	5.9292744295362	0	1.37290286811767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16968073-6	15.8024340765692	0.256733389859244	0.61364150156108	0.418376835996464	0.67567161989574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35875519029332	4.67169117978324
Merged-chr11-6497835-4	14.3631279571878	1.94921324361349	0.549393750510178	3.54793486784918	0.000388264221196279	0.0177657026936099	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22784306814375	5.17887138144207
Merged-chr1-157077220-7	33.1917624444593	-1.16199040189908	0.300519284029443	-3.8666084462827	0.000110359401305041	0.00636839351968228	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10854750637888	4.97894709639283
Merged-chr10-22165799-3	6.96522403453982	0	1.3625363618044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-54474295-3	8.41205324183721	0	1.37718976166808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102720937-1	3.18790284333667	0	1.38942283698553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110465071-1	2.77273381228768	0	1.41003359494995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133109442-7	26.5691026501465	-1.02749031490499	0.322703466076668	-3.18400768171756	0.00145251157726161	0.0481445590416852	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57080254679726	4.51337381704753
Merged-chr2-12174919-4	5.06328134462769	0	1.3797833663845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80226017-5	27.4134698806573	-1.32259853133606	0.378745633251565	-3.49204958478711	0.00047932925686535	0.020861376360243	C57BL6J_F1_Control-BALBCJ_F1_Control	5.94157182887612	4.54536060240209
Merged-chr11-8607318-4	7.39866958697767	0	1.34863177226403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33023940-8	34.4277105349418	-0.574840508868964	0.346519021334776	-1.65890030121493	0.0971358839531777	0.894594394657991	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11457674473557	4.64852550229442
Merged-chr13-21172394-8	24.9703382984908	-0.0503485259644641	0.295520779078602	-0.170372202325145	0.864717431854065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65366647686232	5.60335996713262
Merged-chr13-105266903-6	17.8710551172926	2.16890742831068	0.599114093040911	3.62019096780382	0.000294385662733237	0.0143907466191691	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67113172082159	4.5007295342487
Merged-chr2-129083771-7	16.0146989041492	0.618907753510769	0.717807845393088	0.862219265898162	0.388566869824924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68297728031423	2.53245706043675
Merged-chr6-136620944-5	15.6393711868356	-0.985405767768111	0.455837624414912	-2.16174733060467	0.0306376572322542	0.429014015839285	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18785679885367	3.44821602079059
Merged-chr11-97821944-3	6.61969414408732	-0.692905984214031	1.39657115569648	-0.496147998895532	0.619789996424809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr13-94382683-2	3.40405905527083	0	1.39798243331289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77203053-2	2.56571764813706	0	1.46882889106808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113985950-4	7.71484510453669	0	1.34991525858418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74963998-2	2.92517368131652	0	1.51733842814363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-49051084-1	2.3771112290681	0	1.49336044452763	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39559540-2	4.08500199816061	0	1.41343551592525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92652090-1	2.20645080530688	0	1.54609138364396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15203017-1	3.35105902056147	0	1.37825357646036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52539440-1	2.79371776897556	0	1.54478505169822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133847308-2	8.66679346136857	1.22519145625985	0.604517896854479	2.02672487057035	0.0426905575321313	0.529216879564225	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5007334381435	4.34838121458112
Merged-chr4-106529931-5	9.93488461164578	-0.413247901096759	0.610475242134939	-0.676928190652841	0.498451516779722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37125099301087	2.27319583493277
Merged-chr11-23416721-1	2.58982071614964	0	1.41411767718079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157043551-1	7.60575340021381	-0.787575131284576	0.662427361147503	-1.18892300873606	0.234469965057039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55304467334937	2.47108600827476
Merged-chr5-62760391-4	5.9182672872332	0	1.37722923404074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121498160-5	14.0355503227432	1.4668512855228	0.581001218062788	2.52469571477607	0.0115798505602268	0.222113301553765	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50224159696657	3.6242037363613
Merged-chr16-70297795-3	8.84367761005881	0.99799278875719	0.86989728946322	1.14725359056241	0.251276828683091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	2.13869887539473
Merged-chr19-32787568-3	9.81662269125712	-0.0198950609501936	0.640683330075922	-0.0310528774766716	0.975227369853748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99221333465834	2.64148823427902
Merged-chr3-79193160-4	10.3966098096178	0.0193724778082782	0.880526581207297	0.0220010141905273	0.982447146527527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.69393793853868
Merged-chr11-57677507-5	19.1004456267977	-1.19418341318588	0.40650270776922	-2.93770100509107	0.00330655746759511	0.0919682096386118	C57BL6J_F1_Control-BALBCJ_F1_Control	5.2380714069999	4.13041034283702
Merged-chr18-61124849-5	21.4624549858992	-0.279403829902124	0.491207926095268	-0.568809693530748	0.569485295565993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52459974952138	3.3928251697627
Merged-chr2-21215486-3	4.76073562585125	0	1.42468352615003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153543178-4	12.8978777426824	0	1.40100367143703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56808949-2	5.11061187702905	0	1.38150293702885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110681447-2	8.6945303584643	-3.13802918359031	1.10345789155843	-2.84381416599271	0.00445770387447885	0.113126202106814	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25104685314663	0.376242425970964
Merged-chr18-6108003-6	13.400892384422	-1.87255579463111	0.787893633538472	-2.37666064925714	0.0174701521423741	0.294103437691952	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1142920681081	1.07599819202159
Merged-chr16-44002268-4	7.89614761358183	0	1.36387013279434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119009580-2	8.142144208151	-1.72801645489063	1.01368423140947	-1.7046890948357	0.0882524247760489	0.841135930691803	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22189257198815	1.338064021838
Merged-chr18-61095691-4	5.60367589218564	0	1.37807123476822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106648548-4	8.06452916989217	0	1.38115588891832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82866678-4	8.29704613839533	0	1.36837209658404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61137015-2	2.93771383257491	0	1.42501022905086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51839820-2	4.29914711706014	0	1.389077332916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68435690-3	7.22983540258991	0	1.4145633697217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158498429-3	11.8428530631898	0.111146753944721	0.602065780089562	0.184608987290702	0.853535736273663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78469821888068	3.0540395715511
Merged-chr6-53448434-1	3.1203457338353	0	1.39395292083752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122087316-3	4.8821580024614	0	1.41298843627456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155121396-3	6.37808711144903	0	1.36702746251177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159911799-4	8.90301803223363	0	1.37633942836651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134824588-7	22.8772993732321	3.60615652633158	0.72702745598256	4.96013802045199	7.04431110528163e-07	9.59703527248131e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	4.63108536914882
Merged-chr4-129033740-3	15.3237738671024	0	1.37028210370495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83344000-4	10.0005348399132	0	1.35292733763718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157576131-3	4.37477403908441	-1.74923978509304	1.32444042307616	-1.32073874718369	0.186588489690603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr4-140679894-7	17.8483641677675	0.277211431016934	0.408444112834159	0.678701007815702	0.497327327472776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05407097359353	4.39303584666728
Merged-chr12-55560284-4	8.026099158993	0	1.35971954760905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78039099-8	28.2631869484921	-0.397294266833292	0.406854306297328	-0.976502548170034	0.328815485753891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08727835259673	4.59044593749732
Merged-chr16-36982573-4	8.62455868870004	0	1.36140232395058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61982089-2	4.3048399768879	0	1.39368033982822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129634599-1	4.27967142521664	0	1.45814650797483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139121204-2	8.76122960651818	-0.382900701938004	0.716990680070454	-0.534038604100654	0.593314825649539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73218740131907	2.36206016777955
Merged-chr15-36325275-3	6.39120092184953	0	1.38519526911981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99218481-5	11.373560981214	0	1.39139654228603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38992162-4	6.61924736634452	0	1.36514035879667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123431409-4	6.57822867991361	0	1.35901483866706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62347399-7	41.7982254620383	0.325131434948075	0.400875673593559	0.811053043038276	0.417335210266067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60151059565785	4.2458547575641
Merged-chr2-11712927-4	8.83122335436404	0	1.40011831921771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155197873-4	8.25992677216871	0	1.36815467209182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17873611-3	12.950111266126	0.0436148405515418	0.556417535071045	0.0783850935718136	0.937521730652037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99702916999435	4.03885352205586
Merged-chr9-63614348-3	6.51283834929831	0	1.35042751544039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58201463-4	8.65099793486368	0	1.35220620107149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155385267-7	21.2287337014253	2.84408553186209e-06	0.446846740061809	6.36478970724657e-06	0.99999492163256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07746572591535	3.76733517372249
Merged-chr13-30566982-3	4.68248401724796	0	1.41851189038004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114929268-3	5.51411445205767	0	1.39086167121537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121657108-3	7.47997861568897	0	1.38882258539472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72394587-3	8.38306596999777	0	1.35867690554234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108526860-4	6.15614757872922	-0.696560100937154	1.36186450433408	-0.511475333060211	0.60901825654233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr10-20036926-3	10.5167305990881	0	1.35444425471501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56474177-4	6.10531553587348	0	1.36914962014775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41589883-5	20.051798507742	2.03829704209642	0.447445611066903	4.55540738736098	5.22841478855307e-06	0.000517689252260395	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52791960267273	5.5779782899856
Merged-chr14-48189541-3	10.9755840396043	-1.29697683535233	0.7176633248599	-1.80722184125199	0.0707276967706311	0.735966092793786	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32798809057896	1.5645819449897
Merged-chr7-12803547-7	30.1744566494569	-0.26538145989974	0.394304853241554	-0.673036250297344	0.500924229076651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07857293250404	3.82670987128378
Merged-chr7-34266130-5	19.915005707263	0.975134811258261	0.611415201303663	1.59488152924408	0.110738730804542	0.968307815001739	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98859768019381	3.08521023904631
Merged-chr5-113975774-4	7.88123983865946	1.66767071615133	1.32303102396304	1.26049252507772	0.207491742726811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr6-127246034-4	7.46707005006987	0	1.35695173068321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83566176-7	18.6100179794673	-0.320167118095527	0.584662131466406	-0.547610493076587	0.583959382886043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6656351335145	2.20390517639939
Merged-chr2-153075922-13	64.3242028457289	0.0197109510712193	0.26731405496006	0.0737370546197593	0.941219613707703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24123513009656	6.28435546961588
Merged-chr11-4388725-1	1.66928417390966	0	1.66731893125705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47646893-1	3.03810289203645	0.619188778826587	1.42121429809817	0.435675872143399	0.663071913843739	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr4-145283594-3	8.93491159278593	0	1.41943883900027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37285555-1	3.21573756312965	0	1.49463656566882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8494813-1	3.8456191164644	0	1.40173761282093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51530642-1	4.87016025535512	0	1.37266171907243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22383817-2	2.57726961453256	0	1.5595281883546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80684428-2	8.25015883911009	1.72461269817745	0.796012056446626	2.16656605161996	0.0302679583133516	0.425868428631893	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66069583796294	3.21900923095135
Merged-chr15-53543119-2	3.34462132030446	0	1.70641974732973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50513617-3	8.86810305202917	-1.84477957077231	0.756301838717549	-2.43921074408662	0.0147193813749704	0.263460932552523	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41096496559176	1.30064958020929
Merged-chr5-44050357-3	9.90006508013939	0.705534435843384	0.801979462865327	0.879741275821001	0.378999483625928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.96407541330571
Merged-chr13-37643467-1	3.53179867561348	-1.3991728108138	1.11548001760676	-1.25432350981571	0.209724442093568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79135360541375	0.879366456215217
Merged-chr1-106163523-2	2.4466131020629	0	1.50937956773656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108297706-1	2.77770212657716	0	1.39315505840389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80967494-3	11.1311679540239	0	1.38221137872067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107845066-1	1.74743781491117	0	1.46984325463027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54767706-2	5.46959588789859	-0.387816391405674	1.13903114961288	-0.340479179640943	0.733495699451816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.723581231604105
Merged-chr16-97062277-1	1.62394887366642	0	1.54382669323916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90307534-3	22.2611218775305	0.814798184632472	0.599683556359499	1.3587135681673	0.174237370915934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27279760193937	4.14437865922053
Merged-chr18-88735830-1	2.41567234863752	0	1.47895945836833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5633951-2	3.24713817625781	0	1.55698327223095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126001990-1	1.61737901810984	0	1.64816855671247	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80518882-1	1.96203142208574	0	1.55112815069889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72413503-1	1.99867959774507	0	1.54489703823574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56634556-3	7.37923847536202	0	1.36144597627077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-53668438-1	2.94676828112886	0	1.45854652449444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128763889-2	3.69706238862641	0	1.46462272034367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24380593-1	2.76008235831653	-0.691582757163682	1.4088309175204	-0.490891240789133	0.623503372573635	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr7-27273952-2	5.07105141416985	0	1.35991975799494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29418981-1	4.34847872995775	0	1.39149770275075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-53436591-3	9.42645067937176	-3.46008984137109	0.874982435116556	-3.95446777272755	7.67052096376568e-05	0.00470081002332963	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64463354496013	0.67591700901439
Merged-chr9-41105274-10	37.242130296591	0.511184085577597	0.341494434725832	1.49690312226611	0.134418467692988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48043651814089	5.01065859868781
Merged-chr14-14606149-3	6.3873293862024	0	1.38332382236876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30043549-7	20.3087308583677	-0.14519550187064	0.402377872342675	-0.36084365431255	0.718216326847145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37849842434507	4.20882717914523
Merged-chr17-84106617-4	7.8953270542244	0	1.35545967350644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109446323-3	8.8086642882878	0	1.41146892178017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81464596-3	5.78569531626596	0	1.36622454782303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55803092-3	8.35701614583075	0	1.36406805407653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11658980-2	3.55696216967586	0	1.46551621670014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86504361-2	6.90989340778699	0	1.35921726563984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-26205714-4	7.15393359008948	0	1.36648631137634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154104385-3	5.32505178286	0	1.38156695361346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70386311-6	19.3221608411663	1.11331846629816	0.402219030226831	2.76794080496465	0.00564117007882059	0.134966212829258	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98681383078425	4.96559338991135
Merged-chr17-83335363-4	8.10703806236516	0	1.35967383514714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72884953-4	5.65580920538686	0	1.38570725178952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104152963-3	9.1792508716919	-4.84205598107855	1.0546156398062	-4.59129923577497	4.40495242592081e-06	0.00045264425126773	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5530183489702	0
Merged-chr5-64343113-1	10.8902640030471	0.762028510277877	0.585549944635203	1.30138943271973	0.193125188887929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42271564533928	5.19159626712762
Merged-chr8-71759016-3	12.3398961080278	0.0531365437388151	0.486926498517472	0.109126416205727	0.913102222903621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5059491946375	3.64518664555308
Merged-chr16-48833820-3	8.76210949823515	0	1.395253604903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75787540-8	28.6493493708148	-0.0523757588474148	0.381856070575242	-0.137160995682258	0.89090354040243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04585856367732	3.62402067170517
Merged-chr13-95887733-2	8.26729939265238	1.2927432904835	0.777177516801983	1.66338225506449	0.0962359428642344	0.888617227476969	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.89070142710993
Merged-chr9-67846018-1	3.16554459678223	0	1.4114248938826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82913904-4	9.17927324167562	-1.29831231427517	0.827242217059493	-1.56944639369366	0.116543961028083	0.998929860852342	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00071484268282	1.44790810950236
Merged-chr6-83685838-4	11.5499774258382	0	1.37519508705286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99309161-5	14.8399298742299	-2.04778304881786	0.545808610065945	-3.75183353844572	0.000175546010642259	0.00931885311767825	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70925113069315	2.85504193262584
Merged-chr10-77543355-3	7.58947065740997	0	1.36727975421447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4031127-2	5.54814184272829	0	1.3628589573343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75829032-3	5.10480085233496	0	1.37358445396274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27347421-3	4.88560370111194	0	1.45333330350159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62865673-3	5.92909937820483	0	1.44238210452984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22632529-3	8.50874461952792	0	1.39103588605402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101759774-1	3.14902788241743	0	1.38770050242831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16877349-3	10.8616773107614	-0.119866744936464	0.561866596423961	-0.213336663363447	0.83106437848483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0861950770416	2.95113190241318
Merged-chr14-76174506-3	5.42051167965355	0	1.35957657120056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88592853-4	5.93855275393616	0	1.3597015095029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127793723-2	5.51653661203638	-2.53724883474161	1.14986693152048	-2.20655865925858	0.0273449078509043	0.398723671101746	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	0.376242425970964
Merged-chr14-61678312-4	5.68446574106081	0	1.36549558923257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123957018-2	4.25345342279079	0	1.40446414990733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-53729239-4	12.953475659886	-1.35756745160802	0.937561576550532	-1.44797684286803	0.147623527066021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52242786274935	0.723581231604105
Merged-chr9-86579834-4	8.59727520462325	0	1.38956538638169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163929710-7	22.3413177003265	-0.754027187199559	0.42859405023092	-1.7593039072598	0.0785259033114815	0.786112261161846	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51521462640712	3.80250020893233
Merged-chr7-84779697-5	14.1330247717814	-1.27273436283588	0.548064095832343	-2.32223634519058	0.0202202129569133	0.322710086942118	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76609107468503	2.0561767606081
Merged-chr9-111039823-3	5.29829719293303	0	1.3621528395564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191638905-4	6.26697081385797	-0.0369988510750639	1.23410590627593	-0.029980288471929	0.976082773624546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr8-120570496-4	6.40578602632652	0	1.36420923538625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111979590-2	11.3714385584941	-0.23310600075208	0.563405124019315	-0.4137449071977	0.679060935289566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92689316007749	3.68703137875969
Merged-chr19-46484691-4	9.54399243682952	0	1.34607185592164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97849629-3	7.32529930793004	0	1.35669621365702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46086461-2	9.7357673195785	-0.695898212957289	0.591493310337961	-1.17651070738175	0.239390856245054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55041282378791	3.67553531947266
Merged-chr13-83650021-1	2.21538253580057	0	1.4245876179849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76525859-1	3.55709176605403	0	1.3887419815787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118790831-1	7.44579699706346	-1.13487329793864	0.731349152955724	-1.5517530762866	0.120721317507457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08531610990261	1.56203317187393
Merged-chr10-5256874-2	3.51887653996729	-0.035016410394406	1.23969793056508	-0.0282459214709221	0.977466011782317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr4-133942876-1	5.95164370423858	2.76523441282338	1.24266021197079	2.22525384347655	0.0260642020986971	0.386898951906901	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.40024388691264
Merged-chr10-88492871-3	5.01569205809396	0	1.37955452210316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109480577-2	5.40282979882028	0	1.4208042314207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107458474-2	2.52650874656012	0	1.53796197425818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60804945-2	2.49970163825485	0	1.48002235566093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53452743-5	13.6081217771028	-1.51557787727218	0.491234922212363	-3.08524050050535	0.00203387619106494	0.0631768433543422	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6711791530792	3.14327507880701
Merged-chrX-121497420-4	8.84239368199421	-5.6864641161884	1.08210299600111	-5.25501189554284	1.48014904168697e-07	2.43079824039463e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18425211518486	0
Merged-chr2-159900112-7	17.0486304388713	1.22587977177166	0.48641429902096	2.52023794168689	0.0117275527848092	0.224392130175798	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40142736182033	4.67991825684929
Merged-chr12-98779320-3	4.23605193838753	0	1.38833356913731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142991749-2	5.22827090857683	0	1.37419203698241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100106528-2	4.3393578727042	0	1.4052878121362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58897726-5	17.2371153606768	1.61655029046586	0.44011345108943	3.67303086616496	0.00023969051795586	0.012075381710438	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87076088402335	5.09092434285674
Merged-chr3-100409046-2	5.73176886858126	-0.036511469616367	1.14265838994912	-0.0319530928381777	0.974509458269431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr1-184851964-3	6.8171011374162	0	1.37501932109706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24931710-5	13.5930621400807	1.1233171129102	0.825147663285467	1.36135283766971	0.173402212696154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	2.13836773113792
Merged-chr1-161424152-1	4.23083666976986	0.071191927832361	0.9418964781047	0.0755836012632881	0.939750383435513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17564474993106	1.67689200618025
Merged-chr9-7261735-3	9.27024798432256	0	1.40905118091322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104994032-4	6.72487209963361	0	1.37481224573517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20817101-3	4.34854064621941	0	1.39723125737892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-48590136-3	10.3786104119528	-2.34864991058035	0.706315527305641	-3.32521347723965	0.000883508583508515	0.0326046456829188	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09578919811992	1.74618975104912
Merged-chr12-98272750-1	2.71490429669277	0	1.40082891919183	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128787546-3	8.55795646178586	0	1.37672456975148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40777680-1	3.50246769286379	0	1.38676561733871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109444235-3	17.050208155262	0.547524978063321	0.606462438378622	0.902817624661356	0.366622695551267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41940553036517	3.97869124409047
Merged-chr18-69290107-5	19.7085259558771	-2.4561817836227	0.527587908458175	-4.65549294107337	3.23206480833155e-06	0.00034721701762074	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6452578010935	2.03454729063475
Merged-chr10-43919175-3	7.00474421567392	0	1.36085433731161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72374999-3	5.5256067356295	0	1.36295267485375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133931577-8	23.5305738290942	-0.739788696150288	0.339408804237044	-2.17963908689186	0.029284225058923	0.417320153770958	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47968107755169	4.77516681937863
Merged-chr6-50944064-2	4.43352330840794	0	1.3971533983749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22913071-3	8.64795258071121	0	1.35383273187018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-64831861-4	6.8158514785993	0	1.38564804932412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-131801499-1	4.08025795195334	0	1.39864726540259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-46710204-1	2.9887478811474	0	1.40428676027969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130044299-3	6.93064827754208	-0.81670351608246	0.697648668727869	-1.17065157964349	0.241738855487218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49690686312675	1.8849368839153
Merged-chr1-57394166-4	5.62776658975559	0	1.37306566456167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43845207-1	3.27112556330679	0	1.39021813096946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134813417-2	7.66874259968285	-2.62319608545611	0.802673063378563	-3.26807539101251	0.00108281517892249	0.0381964635373445	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27665492560705	1.63175807346403
Merged-chr1-106815053-4	7.57021338408971	0	1.36101062323862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-60779868-4	7.10274358486037	0	1.3554449995655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61277781-4	6.21642129542189	0	1.36947448654037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45080007-3	7.45596393573701	0	1.36047773824249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35124960-3	7.10772414651954	0	1.35726570156577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103490160-3	9.5473780670567	0.368409289666973	0.68405047090395	0.538570332654157	0.590183362853891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03074215053003	4.64298474319545
Merged-chr3-106556683-3	10.734127669739	0.249815744655317	0.595902792252906	0.419222309247534	0.675053669237768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69408465206399	2.86099003284137
Merged-chr7-83821906-4	9.97607311425673	1.59641229487357	0.893510829729303	1.78667369410309	0.0739902431700998	0.75801651497992	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	2.29190231850885
Merged-chr2-170328727-2	4.12809253687308	0	1.37797442145853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87639385-4	5.91931692972775	0	1.36546810889296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60999924-3	9.11561357083994	-0.693963587847111	0.836353296592844	-0.829749330425547	0.406680524210143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	1.18909650862134
Merged-chrX-12091945-4	8.90133509605608	0	1.36676492059983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80652493-4	7.52977251461196	0	1.36392970977873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57395077-4	5.88986958132385	0	1.36629421230566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99130219-6	14.4641319395558	-0.0546099822514329	0.629125937658752	-0.0868029419589027	0.930828149108057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87837514422973	2.60910034013527
Merged-chr8-40497889-5	23.1218816939721	-1.06696597877028	0.491764610103761	-2.16966808275437	0.030031999633768	0.42347846124306	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32429523997835	2.47280353240502
Merged-chr5-97055832-3	6.87626185690848	0	1.36809113526823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19049785-4	11.2399809373521	0	1.35340160230168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5945209-6	21.3255306716045	-1.74920154222661	0.509261099708205	-3.43478334243252	0.000593027750170458	0.0244215117208454	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02392443259761	3.26085760330751
Merged-chr9-41950895-1	3.88893869706392	-0.430203575764333	0.970762224032727	-0.443160606288518	0.657649570527116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.18909650862134
Merged-chr9-120884531-1	0.925161878892141	0	1.80459112008057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157070601-3	6.27261048914446	0	1.35482653695118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120432186-2	4.9677623481762	0	1.40293910108219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113632556-1	2.66153631271326	0	1.4509183869472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-1293858-3	11.0365006097542	0	1.34500534290821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116323783-2	2.7025561947283	0	1.42645775100607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35736229-1	1.41243829641859	0	1.78625152964933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117693236-2	4.69666599735738	-2.25863273849297	1.24650957280615	-1.81196581860846	0.0699914782091072	0.732499128290874	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	0
Merged-chr13-73445696-2	2.83449998144084	0	1.41828157658518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117192032-2	4.8504201218294	0	1.44088119504381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-6359369-1	3.1327313568412	0	1.41050006670667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30622349-1	2.12681078992839	0.831826058885551	1.1903897451066	0.698784631088248	0.484686634663041	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.63990324542946
Merged-chr3-152557740-1	1.17045130924869	0	1.71355210860503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54019091-2	2.14514137905491	0	1.488914856525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40014032-2	3.20698230027048	0	1.50312957048251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26755773-3	10.8096445163525	0.290407377029043	0.542480927946752	0.535331957435282	0.592420331795943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96757005996282	3.88043092579105
Merged-chr2-158317211-2	10.6085301871343	0.391684368456321	0.52607050728368	0.744547286025878	0.456545445246251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11561005221855	3.671261714434
Merged-chr13-95831899-1	4.02215200458305	0.285197955558885	0.908280875142116	0.313997534643962	0.753522911214463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08153858449613	1.70863195646908
Merged-chr18-20699502-1	3.06164624015522	0	1.42638830608652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82942252-2	6.16176266937101	0.768139346203226	0.883802867286398	0.869129728625681	0.384776177850079	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	2.08990416182602
Merged-chr5-118494860-1	1.68052910178902	0	1.66292242472902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100402797-2	3.25543247846729	0	1.51643130110487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34487561-7	41.2667908331483	-0.19052440096246	0.418444979635675	-0.455315298867591	0.648882421416002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94416485382766	3.77931316522481
Merged-chr2-45194484-4	7.85499789521277	0	1.36274086875881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132807366-4	14.2448118159962	-1.01156514252783	0.541352363760248	-1.86858913019512	0.0616799992007322	0.678316042358344	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03434507842822	2.44720710929267
Merged-chr3-61595780-3	6.58699066326268	0	1.36845376608392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60604319-3	11.5241985676237	0.778097450578988	0.566129827283129	1.37441521905514	0.16931281403785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78104178437266	4.65490992362274
Merged-chr2-26507559-5	10.1233331022327	0	1.348769948681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93179717-5	13.416497245462	0.244050503812045	0.45252799097292	0.539304769385302	0.589676578466009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78881017335801	3.9546854901637
Merged-chr9-115313957-5	14.9477324599048	1.58371785711954	0.545829343926109	2.90148903634967	0.00371393775254749	0.0996475529569244	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78424187151255	4.07006298736413
Merged-chr14-44835278-2	4.94549409154515	0	1.40704871506778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-45011609-6	21.2530461152885	0.992195551947125	0.355133758822815	2.79386436039204	0.00520823191851765	0.127185210628347	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41403578170605	5.38176237745235
Merged-chr2-6728374-3	5.93238344440544	0	1.35371742768923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116866365-5	14.4689317501064	-0.340479997525558	0.529019889221184	-0.643605286800857	0.519831421116961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36384115119267	4.0159676587598
Merged-chr6-86503701-4	5.6547812289669	0	1.35650597599838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45676868-8	24.7258191583905	-0.0757276281173391	0.364453333137689	-0.207784155698007	0.835397504539038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9906598831878	5.02286995438999
Merged-chr17-74123189-2	4.94139431800908	0	1.42871928871425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46979424-11	32.1299329806763	-0.821091270501372	0.396830297943559	-2.06912444628448	0.0385344102545369	0.496019892736532	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2555690883142	3.53450274737547
Merged-chr13-35482537-4	8.24234643650846	0	1.40115150583769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35208568-9	45.46606614556	0.992089231492788	0.322955812583477	3.07190393495814	0.0021269816534417	0.0653592966079353	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18825562788919	6.14695704787855
Merged-chr1-43472105-3	8.60127791551512	0	1.36683057932947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62707082-3	6.35236832509176	0	1.36722422741405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49501678-2	5.6243262001903	1.66581829288291	1.35150472755785	1.23256564251389	0.217737861963438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr6-83616695-8	20.8686128586543	-0.0180199678632775	0.367992868560462	-0.0489682529277514	0.960944596068607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50942818687582	4.7355984341695
Merged-chr15-95963243-4	7.53118173823675	0	1.36946418435176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83540537-4	9.85772262861138	-0.45203811444095	0.659439553043218	-0.685488324676402	0.49303582560629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56773781410272	2.61242738859222
Merged-chr18-12936955-2	4.3042868388244	0	1.4350701002464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60602188-4	6.04297517972029	0	1.35225898704662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37048025-3	8.55666152677387	0	1.34993735333798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45585064-3	7.60000277152254	0	1.3460862918069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89235504-3	3.37571501929733	0	1.49846533636956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138046581-3	10.2273596934567	-0.600434022512312	0.944963796577893	-0.63540426065711	0.525164790000287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.990919527803163
Merged-chr8-77482233-3	6.03512731451923	0	1.40499812842523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88043031-3	6.68020162698293	0.912650635723557	1.01684628138772	0.897530582968779	0.369435861667811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.19104000664357
Merged-chr15-100133688-1	3.00608989837205	0	1.42002903924064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71834484-3	6.75572839340162	-2.37492505053735	0.703440020666678	-3.37615856471536	0.00073505543081518	0.028439059191233	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05822047591128	1.38572824442771
Merged-chr2-45019212-3	4.18524343405445	0	1.40101462108366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65902993-2	4.37580818999689	0	1.39444892698677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120293110-2	9.15915560911125	-1.76744861353545	0.690088402137367	-2.56119159235432	0.0104313811731835	0.206731067666743	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82309291279604	1.39479953640345
Merged-chrY-90799345-2	4.6969218486858	0	1.37380390936939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113542643-4	6.1097243813033	0	1.3701775161691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12260914-4	6.22403103635574	0	1.36721692292398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59559169-4	7.60695642697417	0	1.36158283757494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81637012-4	7.97568502777629	0	1.38310306268881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160021713-3	12.0552614313046	0	1.36548839321307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62780614-4	5.57748018354741	0	1.36635972287479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120197776-6	13.7925244409039	0.70131832519371	0.789012515052179	0.888855768209621	0.374080599645176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51348424539579	2.16855141337359
Merged-chr17-43030313-4	14.709960846144	-0.438657788714107	0.494528970795696	-0.887021417589161	0.375067369620473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84963837514038	3.36126341925865
Merged-chr8-83425458-2	4.73000817523405	0	1.38920348366607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147459941-2	5.41129699305961	0	1.38402181610894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87393571-2	3.73248045901499	0	1.38413289774579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34997906-4	18.7884925297218	-1.03380523969047	0.86022015684054	-1.20179146172008	0.229444334360952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22834565288811	1.88980857233295
Merged-chr19-11330387-2	2.58091568347898	0	1.52513020862653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149290355-2	7.80363704957248	1.45246764640074	0.68265562791062	2.12767255848495	0.0333642416572791	0.453819095401908	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77338015316878	3.3399906914541
Merged-chr2-166012435-2	5.83611320907288	-0.0572637293098551	0.778622015821268	-0.0735449655240675	0.941372463616415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99170652413272	1.59708520306594
Merged-chr1-144295141-4	5.97903805585143	0	1.35551126652854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49399520-2	4.60051428855352	0	1.36759545384919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24645873-2	5.30903789479896	0	1.36065166779039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57712029-2	3.36755602778004	0	1.37488383861254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91509717-1	1.88453304846287	0	1.60341810677962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32441420-1	3.59452954802197	0	1.39382515762384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77236201-1	2.04963824022868	0	1.47023862284779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31076011-4	10.8212853503958	-0.486480535844302	0.522811572870507	-0.930508353465229	0.352107941063721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69740045729455	2.78265752973422
Merged-chr1-156996218-1	3.52514787178073	-0.0759007194293814	1.06356021362953	-0.0713647600358809	0.943107455490331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60978507060531	1.61141823534019
Merged-chr17-44614200-3	4.99949153486872	0	1.40547229022945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67340476-4	7.32575206292499	0	1.35216778818016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94159003-5	13.9712052529126	0	1.35079024430149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82362639-6	19.7048766978971	0.597798946724827	0.514466618564528	1.1619781053877	0.245244358604174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37414557269032	5.20295334150696
Merged-chr17-45678652-3	9.2166147024561	-0.716804348081682	0.712643919970186	-1.00583801811102	0.314493495828405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23765162036731	2.24992080272587
Merged-chr2-156730654-3	7.89966298252195	0	1.35286345327688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121736389-2	5.23629358152203	0.583907968748173	1.15086845994085	0.507362908162576	0.611900206285604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.17858215524007
Merged-chr2-43902802-4	6.55709223365283	0	1.38631703585796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25119731-4	5.08383081897628	0	1.36988203160057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118494304-2	4.779468692672	0	1.37593034134627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45894348-2	6.8982641739852	0	1.38253470851639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103980239-2	6.21237463005174	0	1.36658276032152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117432601-7	19.7553844616002	-0.248442722320451	0.392971899872713	-0.632214981277094	0.52724640923186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29119411506532	3.90861462462852
Merged-chr12-25316173-5	9.07652905810493	1.73442781031305	0.866821251555458	2.00090596210087	0.0454025249453603	0.553123230278987	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	2.59716501324732
Merged-chr19-29442623-2	4.26542266035678	0	1.38744167097897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115329337-2	6.58313956981035	0	1.37343629817201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53794109-3	12.4890156391083	0	1.34828069155121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16044047-3	5.43875140146944	0	1.367218049538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34139880-2	4.9341465409028	0	1.37023162170694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160011479-7	19.0032752469095	0.0651631335590837	0.474899628348792	0.137214538966167	0.890861219175565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90107687913203	3.82503624866112
Merged-chr7-101070572-4	9.59897898494267	-0.0400233585717297	0.603638526371353	-0.0663035191148613	0.947136181543837	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98814934133005	2.95479014398202
Merged-chr11-109394976-4	9.15071159029318	0.248620952159526	0.741535320019331	0.335278638046594	0.737414906475671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.62805269464997
Merged-chr13-13968997-4	6.25869309634117	0	1.35925468810672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9715835-3	6.27084153417754	0	1.40929635465731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101343301-3	5.54624820784294	-2.70118703541083	1.17392332845738	-2.30099101868977	0.0213921387434206	0.335600366508975	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0
Merged-chr5-110417229-3	4.84821981684438	0	1.38637667552705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6531364-3	8.63294018520389	0.388799799251709	0.699567922602232	0.555771336406425	0.578367182732329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	2.75363610327158
Merged-chr2-68350851-3	6.62951875489847	0	1.38438556617794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95211984-4	6.15920156091079	0	1.3721610459653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109759942-3	6.89372277232341	0	1.37022157399517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95575220-6	24.2854768150288	-0.158733051388495	0.70597434584038	-0.22484252058698	0.82210178621526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09296523225154	2.01161228884919
Merged-chr13-101850268-3	6.59410328381469	0	1.39326659024831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27562801-3	13.7334353966405	-0.0786230758951247	0.890612204891872	-0.0882798096222701	0.929654285881889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.788686275880602
Merged-chr1-64907936-3	4.53059299681158	0	1.4251054762738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16830059-4	14.360963690076	-0.824550736564063	0.553093644430029	-1.49079770644223	0.136014614129862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64580268687092	2.45824470849678
Merged-chr15-97824131-4	9.53286508783899	0	1.35695512292636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148764266-3	12.0938914039793	-2.48341210449494	0.901044247217689	-2.75614889297989	0.00584863667184682	0.137928868045519	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39530158927722	0.577068348605183
Merged-chr14-54392689-5	17.6244930788483	-0.611520194550672	0.617934761350114	-0.989619346247123	0.322360210287433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95763603157876	3.15496103984389
Merged-chr4-95157850-4	6.94278252955794	0	1.36649218563989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33027300-3	6.11302772286546	2.77476367928862	1.18311747708771	2.34529852954147	0.0190118503932496	0.309732659387901	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.948471875794396
Merged-chr11-72941000-4	5.29076703163836	0	1.38047216072258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5770458-4	12.8850371684729	0	1.35192419470917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7801551-2	4.26610333466333	0	1.39499464569427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72528213-4	19.9148669159113	-1.45475915177094	0.445673771773988	-3.26417941531611	0.00109781622716272	0.0385530167181762	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20889502261134	3.88658682472053
Merged-chr5-24025188-5	18.3026235175894	-1.58931363797464	0.541636821316734	-2.9342791616548	0.00334323367266055	0.0927547582644862	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65650399337611	2.04328300003315
Merged-chr16-90995281-6	13.2701978432214	0	1.35016434176764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67181052-2	4.33848926904166	0	1.38637615689063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120572345-7	16.8595213521531	-0.0762609929748624	0.352792079620519	-0.216164130036288	0.828859812614492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71483814987416	4.6692063075543
Merged-chr10-20534063-2	3.21007017034211	0	1.43827762062877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74794303-2	2.86174357415953	0	2.05167975331866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74906165-4	5.94974303882203	0	1.36486766405758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45840101-2	7.99187711005615	0	1.38443824522664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83610096-4	11.4574253713236	0.394358513533526	0.444404115000618	0.887387178070973	0.374870484264293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55373189562152	3.92546253440906
Merged-chr11-3197692-4	15.9591581063473	0	1.38099938775995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75566679-6	21.6940515508118	-0.986349112942974	0.634591413348031	-1.55430579770865	0.120111491240687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75521533196448	1.56203317187393
Merged-chr12-33118787-2	10.0837698875482	0.212788970690256	0.782997750458996	0.271761918301193	0.785805088303481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93994840877528	2.60030758339423
Merged-chr3-84429500-3	4.01743465107901	0	1.39373793044892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66132098-3	5.594848467477	0	1.38444134647155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84149021-3	5.63726302519933	0	1.42074271958078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128704712-2	4.39131901055102	0	1.40813130295316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4808836-4	8.4340404691357	0	1.35593611756676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62275013-4	6.96511896747267	0	1.35866068171415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110678183-3	7.73673110913524	0	1.35158879083883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80235475-3	5.96430158264164	0	1.38961949344887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88303708-8	28.9072800738717	-0.930377013079606	0.290749761885873	-3.19992355985077	0.00137464040052822	0.0462065020961246	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60523633192845	4.6349931582328
Merged-chr3-146156983-7	25.8286395164346	-0.209089679012735	0.451959119666618	-0.462629627137444	0.643629868500584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91590863328423	3.03951902993094
Merged-chr14-30581391-4	14.2442482733839	1.60115408585832	0.601111795827727	2.66365440999796	0.0077296927833825	0.168071348004756	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61076849167644	3.18178241121108
Merged-chr9-44460798-3	5.25347605238442	0	1.37231601498073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109360896-1	2.76220246507938	0	1.43576673661364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67905512-6	15.8806836147791	-0.0343484403293376	0.815621228174821	-0.0421132250397673	0.966408437467354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	1.28728541095094
Merged-chr12-84674001-2	4.30536248180247	0	1.44439369265455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139328484-1	3.01100608714481	0	1.48195565050255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30597395-1	4.04223557858337	-0.808574139735456	1.09557739431186	-0.738034705657037	0.460493359603672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76550025052025	1.06702908365212
Merged-chr2-22589068-1	1.65691825446782	0	1.60435019465215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95870112-3	5.7884467994893	1.77733378731229	1.29562145226752	1.37180021541146	0.170125640203215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr9-49050235-1	1.48894943881565	0	1.59340798866832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116275748-2	3.62813373041753	0	1.43290996741611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52420200-3	5.77893260011703	0	1.3767294778799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102010877-3	6.93542582376165	0	1.36743199641233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55645094-6	14.1840296776274	0.566449433592167	0.642669690804261	0.881400572793921	0.378101047758251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31528043526326	2.96817048781349
Merged-chr17-47216035-3	9.556570779592	0	1.36146007394349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5464913-1	2.15597973151013	0	1.54290107243202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99273223-1	1.656068286395	0	1.54187677038914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69396419-1	7.04957533673904	0.386963088319204	0.630778928583633	0.613468635022575	0.539566515614629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34504896528964	3.10007440524458
Merged-chr1-74439683-4	10.3108294756596	0	1.34464670359843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86180567-1	1.63196215761489	0	1.5007439966123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15717648-1	3.79508032194864	0	1.40536629178992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142458923-1	3.86835397265714	0	1.40485797962776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38854527-3	5.4382701399742	0	1.41094939598858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92336578-1	2.50203714891925	0	1.53801095565362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12852460-1	2.38859861822721	1.08602998020324	1.66255887627742	0.653227982298548	0.513609313042589	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr15-34027318-6	28.3680283080914	1.97379787357429	0.437695052394085	4.50952749586292	6.4972173680349e-06	0.000616195215167839	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27192482389018	5.40780712973097
Merged-chr18-56875341-3	6.74035750807151	0	1.36374408072186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125699757-4	5.52774108092097	0	1.3857291077148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85090477-1	1.66132895957762	0	1.68806753194422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120016440-1	5.3023836803651	0.675856006048522	0.896178014766303	0.754153745028845	0.450756908441872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.95685815637649	1.53467426421905
Merged-chr14-79548472-1	2.57072496028794	0	1.42606799299797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164449775-2	5.77361880909043	-1.82060972303964	1.45283687965609	-1.2531411809085	0.210154331381802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19664257419518	0.376242425970964
Merged-chr2-160047872-4	7.90362473773281	0	1.36391909611743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117677681-1	1.72830141536003	0	1.6009731349261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50761777-4	9.59293896353776	2.07695954818634	0.918689459754264	2.26078521543275	0.0237725605532805	0.362890373242285	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.19524916093729
Merged-chr11-99066149-1	2.10889455150896	0	1.43606343226349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89026858-5	11.1708520578254	0.905985256510522	0.678625782988128	1.33502922998487	0.18186677990951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62354617165363	3.05811425345361
Merged-chr16-4268192-4	5.5292685329902	0	1.36103367698978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33865612-8	25.9484578212828	-0.334834559214785	0.367162352429793	-0.911952320271755	0.361793817481131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70947555576895	4.31349886337262
Merged-chr8-126628834-5	13.0246744235393	-0.536023657092638	0.600149527485129	-0.893150177654553	0.371776754825947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15935917636843	3.33691013192103
Merged-chr10-41968378-4	8.50685088260557	0	1.34392688223262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35028496-4	5.45812220502618	0	1.37966437307493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149729008-6	12.7651376777305	1.61023876680737	0.930857758408823	1.72984406292091	0.0836581395221467	0.816245624215499	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.57740420521144
Merged-chr8-126759912-5	14.0045841453907	-0.159513064719923	0.567720775790211	-0.280970983487255	0.778732655512569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79884064380665	3.67068144294782
Merged-chr17-73302227-4	6.88361229150241	0	1.36282489670613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97795575-3	10.2698720240284	0.94775134354942	0.771067365353521	1.22914207776761	0.219018541234979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84016081186083	2.26441407084111
Merged-chr12-79812650-2	5.13739743405406	0	1.38250392650228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36705963-2	7.72132977941471	-1.25632756219331	0.77694309914497	-1.61701360572725	0.105875344040771	0.945192614010884	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73893482823591	1.97656658922368
Merged-chr6-87842884-2	3.27976839890125	0	1.40007130743775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19619188-3	5.25595288742714	0	1.38127292138675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152528405-4	5.96492728616675	0	1.35841655503194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85517458-4	12.2552184662321	4.01887369195068	0.971127764783782	4.13835731784011	3.49801301775946e-05	0.00245547286507801	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	4.07015653682872
Merged-chr2-60948365-4	8.37927309922309	0	1.36580979948698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65151959-2	4.7304982555977	0	1.37971728390366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126035542-3	7.62505689761195	-1.03610947237916	0.912843735602354	-1.13503487176309	0.256360707682631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09093093088911	1.13341594473881
Merged-chr16-23985607-4	11.3290025814454	0	1.38410852252493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-14049254-1	1.93587805276874	0	1.44927637797171	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113749255-2	3.531405608374	0	1.41331030463038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5415588-4	7.33957316895304	0	1.35834148063206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119873232-5	10.3416622873252	0	1.35175767780841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119848009-2	5.43999927989187	0	1.3692674364441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14328396-6	18.6499131564533	-1.20788470016942	0.542687857914738	-2.2257448412623	0.0260312773490545	0.386515762200834	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96510336608248	2.81139059143938
Merged-chr2-130733685-7	24.9549420369785	0.383048476113474	0.362221943969343	1.05749660530201	0.29028500309877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18854740149925	5.61210689076695
Merged-chr18-80704948-8	25.1080223633179	-0.156449327279539	0.346704600817489	-0.451246758510414	0.651811712826618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88217334385858	4.80969740495149
Merged-chr14-121416896-4	6.85175722068746	0	1.36083449937739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64092725-8	28.2878038908547	-0.66084215486272	0.567846916482737	-1.16376814891591	0.244517983208271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08602414835365	2.66320599947928
Merged-chr1-135467122-3	5.67661849159464	0	1.39953013491715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-28304041-3	4.66585067626622	0	1.48105079099495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87525335-5	14.8247527401121	-0.254457605582237	0.508000211994381	-0.500900589358517	0.616441087715925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57058717652133	2.86373883711803
Merged-chr11-53926518-3	10.0038438804116	0	1.34743455557858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52845531-3	5.30777396273162	0	1.40718381200297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-40440700-2	8.86622386993078	2.00212463590948	0.736563170936397	2.71819813277409	0.00656385194514126	0.148757980868993	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	3.61582850777051
Merged-chr1-92708406-2	5.648262213853	0	1.36364244881106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46302097-2	3.68936159029094	0	1.45847994727027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3743408-2	4.44053709690103	0	1.38451269004462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66928802-4	6.07452363706358	0	1.37687610731789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59381169-3	10.001186965214	-1.23819263863932	0.771951698867397	-1.60397682971097	0.108719159999773	0.960485099695701	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54053031365018	1.34263109599227
Merged-chr18-58688466-2	5.92887275229037	1.12537764907646	1.12617773937726	0.999289552374532	0.317654445047533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	1.18909650862134
Merged-chr4-99126992-4	6.83266152201291	0	1.36608497333843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51710926-3	6.98403738292649	0	1.37031813177477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57686308-2	5.14691355229023	0	1.3689362270633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11844224-4	11.4896343350694	-0.783003856379589	0.514429890299182	-1.52208079496355	0.127988837475031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81688587254719	2.49425566442921
Merged-chr6-37589751-3	5.58928883987798	0	1.36717604898625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86634590-4	7.68239265826588	0	1.36174284013498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36231107-4	6.22571622256183	0	1.36176186431572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88953236-5	27.7007177044923	1.41690871124293	0.544268037168836	2.60332890135049	0.00923233371161685	0.190098647056735	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93511414188456	5.20396820647225
Merged-chr10-95703190-6	16.9590840024139	0	1.35232510253047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4164982-2	2.45516119674263	0	1.54478408597769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42026357-3	5.54136114635116	0	1.35705603993739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53830823-2	2.45119361006208	0	1.54643672894045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84180959-1	2.95941362190033	0	1.38599129421614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96433910-1	3.30101684762258	0	1.38706901805948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16162721-2	3.45818311445924	0	1.53725006941105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60505914-3	5.17432067022136	0	1.41189315146853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49633541-1	2.75772625734028	0	1.4193057471443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51960240-2	3.65494991255709	0	1.45934967925356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161354484-6	37.4495098687395	0.536745835949974	0.479111874457733	1.12029332722649	0.262588784653828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48179635057438	3.26396510226065
Merged-chr14-22739781-1	2.21611586959074	0	1.47154990604865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92477190-2	6.04457931763762	0	1.38412463867108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-56440613-4	5.67887544267583	0	1.37696173209686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13538879-4	9.54796153486669	0	1.36289127064048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76216637-4	7.43460068931417	0	1.36223581778518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93180116-5	17.0664508383948	-0.128564168092619	0.633273819671481	-0.203015131999794	0.839123204865872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23016711638071	2.94440867170675
Merged-chr16-22545217-2	4.93061233942993	0	1.39017531518752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114874450-5	10.8173778760356	0	1.3413682121499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52762733-3	7.44600673293008	0	1.36334823528829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120986621-3	4.18015187446604	0	1.40714054482383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45961919-3	7.94283645822905	0	1.37319718065148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102032997-4	9.62194571525333	0	1.35375351315994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171564478-4	6.87305546510945	0	1.3575119923383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67087578-2	3.82253604690945	0	1.40060351086611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56166318-3	4.42364916442323	0	1.45750640337237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79793993-3	11.9189875926702	-2.03745843361573	0.918371373980654	-2.21855612156597	0.026516937505743	0.391694077683338	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75361422657935	0.724326877898254
Merged-chr2-145685094-3	4.19964538243281	0	1.40748687350394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99297958-1	3.01746521865113	0	1.384756288127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-59817514-3	7.44991367214481	0	1.35854572488929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92751938-3	11.7447917635324	1.36207856853738	0.788401045814665	1.72764683122651	0.0840515612609684	0.817667284292425	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	2.81832903480327
Merged-chr2-143975426-4	7.99360492313013	0	1.37940783513162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151616712-4	6.6995734361395	0	1.36308956851299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33194395-4	7.43739836827439	0	1.35419452427345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120305980-1	6.58174960865553	3.36417578309264	1.10648069924129	3.04042879862201	0.00236241542153385	0.0707930208925902	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.45914805170659
Merged-chr14-51140596-4	12.4012676812239	-0.737307855665804	0.581969731703365	-1.26691787476263	0.205184656595996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08921834981692	1.73795749839718
Merged-chr2-128067563-3	7.64431256080768	0	1.38104952880617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60559970-5	14.0603225064798	-0.410994605826859	0.546132119062721	-0.752555272764791	0.451717203616135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5900026770234	3.58618184691542
Merged-chr9-21297345-4	6.73812992979461	0	1.35943634526406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43536728-4	7.40593506907568	0	1.35200882274852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115694327-5	14.9227668475906	-0.0957469365416941	0.433250673705484	-0.220996624708727	0.825095061101861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94538648511894	3.85713575026834
Merged-chr10-118796094-4	7.27278751671963	0	1.36041348682178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85325306-4	13.0167641925094	0	1.36809653323468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86859491-4	12.8543430756986	0	1.38639792800243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42832402-5	26.2609027644925	0.278632377893507	0.475814454286974	0.585590402693941	0.558150799348468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39269219802373	3.34385485974803
Merged-chr8-127829873-8	25.6343583792306	0.336201210334373	0.35618454534595	0.943896119939263	0.345222734987929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43598126045224	4.73944372390361
Merged-chr5-72230807-4	6.33495780784398	0	1.37497979936393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76942040-3	9.53104551211552	1.79302474769506	0.819378360367435	2.18827447052789	0.0286496153540618	0.411524908928344	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	2.8834794255911
Merged-chr2-58865336-4	8.66240352344197	0	1.35415586280807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22530911-2	4.55383598118249	0	1.42371205774145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22008635-4	5.95276714734297	0	1.36100735965074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148548112-8	24.0000485829283	0.00465486839060034	0.425352940554868	0.0109435434595283	0.99126848991612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16974948308854	4.16178110903089
Merged-chr5-52168656-4	5.88062692183752	0	1.36248249291784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5018906-4	8.05192586522208	0	1.35863992295521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104032699-4	6.66174774505644	0	1.3573658481222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107700436-4	6.53499312134284	0	1.35662147176609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64360372-2	9.06558638450483	1.06814517602964	0.819051396030411	1.30412472429261	0.192191060229123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82780813874672	3.29884237889258
Merged-chr4-141681984-6	16.8402459966663	-0.104491552140519	0.475551229690558	-0.219727225200347	0.826083600139947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43063748661984	3.3478129876819
Merged-chr8-56063369-2	7.08871047523193	0	1.36271515912558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29355074-2	4.09311106924516	0	1.36162338872091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83327616-5	12.3299856394548	0.0916184251845407	0.799087993681978	0.114653737647075	0.90871958403144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38268966767817	1.80610776840488
Merged-chr5-105531390-4	14.3907272690053	-1.60449931766305	0.400363990916428	-4.00760146783024	6.13385114501398e-05	0.00391337265471084	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39664509317893	3.8276080854416
Merged-chr14-99970382-3	5.79610244929217	0	1.37813814979162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27585092-4	10.831422087242	2.85565997166335	0.64716093069095	4.41259636704965	1.02138307795429e-05	0.000899860011904653	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75733238011489	4.5886814269013
Merged-chr3-136235764-6	15.0984770649097	-0.382197142204014	0.563074544369668	-0.678768283925645	0.497284692559309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08269754656065	3.05849010754079
Merged-chr8-84501676-10	42.1308143964151	-0.397741171060002	0.325833341167513	-1.22068898669127	0.222203799230381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00873139945244	4.58777921069549
Merged-chr10-24160566-4	10.1368224320583	0	1.35115449551479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15126382-1	1.08526498750206	0	1.65676786902368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106354351-2	4.11895229537874	0	1.38337391735124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98982184-1	3.75772920791042	0.271329152116524	1.0917923524636	0.248517175911956	0.803734282383722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55930082799915	3.17679585064355
Merged-chr10-17275394-3	9.22255147471131	0.439021728462473	0.773984022291231	0.567223244690289	0.570562517352047	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77777167463237	2.54127668853371
Merged-chr2-52298151-4	8.29576435620246	0	1.36546131947542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-13027426-1	2.5889401867827	0	1.43393522074348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106214309-1	2.52359767689536	0	1.40093021157331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-27411329-1	2.04281096527862	0	1.48673874385179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-139485766-1	4.05763706669585	0	1.41830274363397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-37696458-2	3.77851871576712	0	1.42786084803796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-96105754-1	3.13932774258423	0	1.41703065100462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134539666-5	17.4836202421478	-0.024482430944212	0.538293830460283	-0.0454815373293013	0.963723490745552	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51343199975953	3.71935225895705
Merged-chr17-34280814-1	1.65048536280841	1.16212855643601	1.72686365164357	0.672970651348147	0.500965962465587	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.71701424649985
Merged-chr5-140806507-1	3.01617149962414	0	1.4048168871951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87790294-1	4.61231628504355	-0.984317422395515	0.850721116850222	-1.15703889664798	0.24725646908113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86019136253373	0.882176137820124
Merged-chr18-65305134-2	5.25658128404294	0	1.42921071531802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29839264-1	2.35392787398813	0	1.43668649795251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118507908-1	1.86876664258552	0	1.5494659330675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102860336-1	2.30293863226608	0	1.47633147048701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86874230-1	1.99644548437739	0	1.48948863252755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84233914-2	8.87225901150041	-1.08482985723207	0.536472588030132	-2.02215338012971	0.0431605088102293	0.53321865873074	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59043134716054	3.71121334829302
Merged-chr12-112605932-1	2.81667088852905	0	1.4361861489802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72197254-2	4.89567695415317	1.46681002914518	0.941512501472823	1.55792942403911	0.119249979255571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	3.03542891054255
Merged-chr10-40489274-3	5.12441646339195	0	1.37877902313207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22021693-2	3.70604683155306	0	1.44054702332719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67048394-2	3.48304379289703	0	1.4337499979895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34577676-1	5.38517434930415	0	1.37931688946289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64511067-2	15.0544272908636	-0.525871038670256	1.01754333918703	-0.516804560963862	0.605292595849413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.990331813111976
Merged-chr9-21446437-2	3.27803284764566	0	1.40252830484131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87840199-3	5.60069012529318	2.1459288900362	1.22598514996509	1.75037103026682	0.0800543115165153	0.793980374298403	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.08918047352118
Merged-chr9-16312172-4	14.9402422630667	0	1.36411974024734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116782846-7	19.1773611949192	-3.3789488132126	0.774538894428667	-4.36252954824826	1.2856721507188e-05	0.00108210626338694	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37537143725575	1.09982365757507
Merged-chr4-108348675-3	5.52718100845128	0	1.36989274997503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-156067744-3	7.52687519258284	0.192930394549614	0.774488236405081	0.249106939887342	0.803278061389383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	1.72711687624513
Merged-chr18-12938417-4	6.47425976017843	0	1.35855919460571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23843976-4	15.2040610381206	2.81503374907516	0.61546479270804	4.57383392588393	4.78879471883156e-06	0.000484756223688948	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01259914296816	4.84576634458706
Merged-chr17-5520154-4	4.85293572583983	0	1.36341722944553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41765956-4	7.81494487570118	0	1.36253848529842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61676105-3	5.68121640410807	0	1.36823811332691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-139878451-1	4.95349708426124	-0.407984389508169	1.15377606178465	-0.353607951335982	0.723632714593682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.577068348605183
Merged-chr6-114883608-3	6.02346996878034	0	1.37578622444217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33619037-3	11.4113422072439	1.78616159386852	0.721488293596351	2.47566261257707	0.0132989184872117	0.245555675966828	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	3.67608498500607
Merged-chr12-102429975-6	25.4622312901982	-2.01967708807083	0.47529315994713	-4.24932916832949	2.14411652421433e-05	0.00166979985873591	C57BL6J_F1_Control-BALBCJ_F1_Control	5.050605985652	1.89040459469994
Merged-chr17-43580712-8	25.3124913145713	0.117911381544469	0.375873171809727	0.313699913661722	0.753748966351456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36006254326523	4.45217449161191
Merged-chr9-90126829-4	6.4169489671618	-1.0015132526502	1.04168326852837	-0.961437399359478	0.336332287253172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0.723581231604105
Merged-chr17-81668151-4	8.27607357424207	0	1.35552140125108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60961201-8	15.0019240869114	-0.0344259419059914	0.532999774951987	-0.0645890364758457	0.948501214107695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82843036934329	2.80368293850421
Merged-chr10-39450552-4	7.14769246651881	0	1.36996873799615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67116123-8	27.2136841800373	-0.165203820653057	0.337304777844301	-0.489776106074947	0.62429234040518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16225913399309	5.10102321258604
Merged-chr14-21299971-4	8.80394006870029	0	1.39010434405819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134540165-4	8.9564305891759	0	1.38278308366644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16581858-4	5.7413513030664	0	1.35400099782242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91737086-2	5.36238981546164	0	1.3887369937435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-135474362-3	7.99773689350371	0	1.38704899554857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38485657-2	4.37642696715072	0	1.36354814787216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53794503-1	4.41114354541683	0	1.3864959565286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30778922-4	10.8743387117549	0	1.34595269236971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43685529-4	8.72002321113822	0	1.3542034705127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50098698-6	27.8808853648117	0.739137689333134	0.537376364447068	1.37545626907813	0.168990034463567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60992921786274	4.47394928215814
Merged-chr7-98531726-4	14.1695599143436	1.38740987631774	0.672276091276717	2.06375013825483	0.0390414128624919	0.499823872301507	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21627226133353	3.85249262470754
Merged-chr12-55774531-3	4.24137691875725	0	1.39618620177415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176933419-3	6.64181936523102	0	1.38208454868358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3955273-3	5.62612716589146	0	1.39346622650532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120087921-1	2.94573782860728	0	1.55358563213599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-103885-1	2.32482441020326	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97360205-3	4.91530044805256	0	1.41923906062474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167923734-4	7.21876430542921	0	1.36293895856273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146807823-6	22.6805362921965	1.16046683417405	0.464146626740105	2.50021602510502	0.0124117595903095	0.234261347128098	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80890245807824	4.91412888589625
Merged-chr14-25850620-3	4.13408308036702	0	1.40384878022975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79050846-1	3.7295993339046	0	1.37087715288869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37295480-3	10.7695212469837	-4.49747905078979	1.04918789844687	-4.2866287892259	1.81405050227399e-05	0.0014480171990178	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68797209055381	0
Merged-chr15-6326180-4	15.0785750301393	0	1.38817658950538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167180211-6	9.73887895044715	0	1.35958816902288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72377143-1	4.16501086469481	0	1.40393244329154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105616324-4	7.94447403217256	1.10864229548004	0.999606938881481	1.10907823101005	0.267396435005828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.18522971689543
Merged-chr4-89212419-3	4.50888078015352	0	1.37145982373207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160234009-5	14.7649419755108	-1.5344079719677	0.436048397707131	-3.51889372839359	0.000433350258225795	0.0194681708156165	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61258139128996	2.50773587892889
Merged-chr13-19842921-5	15.1201939110384	-0.220411878246605	0.571411881609535	-0.385732053078343	0.699695121598844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55632924095453	2.87713295725999
Merged-chr4-137370588-7	20.3700556748167	-0.296612703996704	0.40010005859101	-0.741346314822483	0.458483486396825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43702623150248	4.09577791306996
Merged-chr1-45917381-5	9.51174616584555	0	1.35394282624608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80664512-4	14.6203307527713	0	1.38491362823402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88698981-4	6.50377363880266	0	1.36017125773507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127321268-2	6.81458976972357	0.66179660916416	0.828108619146808	0.799166430420689	0.424193914309183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05916644618774	2.86228010699883
Merged-chr14-122010519-1	2.52735519185716	-0.0325423758860799	1.46185219532832	-0.0222610575748194	0.982239712731613	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr10-98893773-3	6.82719375028305	0	1.3740042696238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12927537-1	4.18231435939308	0	1.38888974189977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62706583-2	2.70353044170972	0	1.53343202374026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75262927-2	5.11497365495149	0	1.38757287394167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72291843-2	5.2676142948992	0	1.40922568164449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40818666-2	5.28137867472081	0	1.40062441103357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101700529-2	3.92499576552239	0	1.40173096146706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160085500-6	20.4627428457355	-0.3607207245682	0.457551870160679	-0.788371216669981	0.430479601932652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91111724827974	4.73534373923311
Merged-chr8-4140266-6	17.9380167357218	0.86875797451867	0.356161478529077	2.43922497768872	0.0147188015782534	0.263460932552523	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2176053709841	5.20580376008208
Merged-chr19-16373261-4	10.9927819370056	0	1.34603328614539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-12289960-3	6.98201597452187	0	1.38533407776557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53429962-6	23.881453364277	-0.436746385583877	0.477778337158294	-0.914119271672164	0.360654177134049	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19464560618517	3.46195787447828
Merged-chr2-163764015-2	2.95188068744898	0	1.55964795136686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35799619-2	5.00256017986649	1.27370552964676	1.34612610113961	0.946200752342928	0.344046202507707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr10-53877482-1	2.70625782317933	0	1.44166134942077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39507636-3	7.22556955198144	0	1.38188308309814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44425907-4	12.8522475588403	0.207172742808539	0.819555867511344	0.25278660189163	0.800433121669931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	1.82011828833849
Merged-chr4-138065664-2	3.30903448441794	0	1.42972471859483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167839434-2	4.21177026037591	0	1.37477879534213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52917026-3	4.39451871192899	0	1.43734683622181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160700448-3	5.12123814634946	0	1.40550731089556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-114260595-4	8.87677026375457	-0.860510152964284	0.757407447795322	-1.13612581374672	0.255903912957214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07215202916989	0.956353103033036
Merged-chr11-115076796-3	9.18141256548515	0	1.37903857428101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92821195-3	4.67244495870649	0	1.4060788320908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140138229-1	3.02857499296263	0	1.41138874603571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20026668-1	3.13148567604804	0	1.39449289683927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119124975-6	23.2384271968016	0.288043110777756	0.439070955255881	0.656028615260808	0.511805712793997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38024933941244	4.57808139522583
Merged-chr9-78538192-3	10.7627779371472	0	1.35617214256197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63997252-2	3.7142700077449	0	1.41086576503971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3127418-6	23.0362981538205	0	1.36097008992897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143050377-4	7.35833233771611	0	1.37335152656319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141031928-3	5.48200109290585	0	1.3722188823579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45052455-4	4.81170123323496	0	1.40301798839455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12439298-4	5.35298169469874	0	1.38351408855024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97824900-3	4.66008619119774	0	1.3758008295082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54808827-2	6.91256958490508	1.60924919417041	0.916880292717109	1.75513554708599	0.0792361252906209	0.790288563905291	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60308582214967	2.71114652692109
Merged-chr12-102246047-4	9.61929685735684	0	1.35452159615869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-91506789-4	13.1896901322751	-3.86400864783866	0.95430448825939	-4.04903120060395	5.1430088712411e-05	0.0033887129603854	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82264110660392	0.789505890477757
Merged-chr17-88132141-4	8.19220082418587	0	1.36226935563197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109021632-4	5.89441589973615	0	1.38993648087004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39855897-3	6.38472419479245	0.639254676045507	1.0830476767561	0.590236874853168	0.55503185345022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.27673210875742
Merged-chr10-75330321-3	6.09869394063055	0	1.44375044685053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17680425-3	5.826348004489	0	1.37939927873732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132180555-4	7.93840198907415	0	1.38192674116098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30023582-8	29.1194744077586	-0.0595357287952038	0.398025177296968	-0.149577796056816	0.881097727255625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39950369218237	4.30712104113399
Merged-chr11-77468017-3	6.11943486377707	0	1.35854959261283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120536146-3	8.34349283306499	0	1.42518443531952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73060034-2	3.39124509425239	0	1.40914615714995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88026255-1	2.86812443750242	0	1.95180422967187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-53448443-3	4.96794165224336	0	1.36610043806034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38845725-1	3.39544339414672	0	1.41047708210374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43695864-3	10.2968444639597	0	1.3982495370021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80843922-1	3.15292821812725	3.32718742360046	1.32793395126745	2.50553683067206	0.0122265663829997	0.231461379233968	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.34883400838639
Merged-chr8-56691866-1	2.23466903822224	-1.91810439369582	1.42971206703813	-1.34160187769099	0.179725117056964	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr16-50538018-1	1.49904429610199	0	1.60128298940479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155122070-1	1.55330617467922	0	1.49272090561091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-143369946-1	2.13364398364745	-1.34725193601842	1.67432938548951	-0.804651669912924	0.421020716368737	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr10-44448688-1	2.03799825192553	0	1.54628239369197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46515288-1	2.34234843134782	0	1.56080247448004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59722746-1	2.99719687470017	0	1.39198627932537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130918898-2	5.37269714907906	0	1.39961445230077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92149484-3	3.60651806735399	0	1.42175839866293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-66973487-1	2.11092293780558	0	1.43127426088939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19952402-3	3.71296591067193	0	1.42177270767493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96384327-3	7.64586204108113	-2.59708482281261	0.821560941725639	-3.16115907038812	0.00157142656018225	0.0512846994310757	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91755615249513	0.788686275880602
Merged-chr7-101039506-1	1.60799258844049	0	1.5797496765169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100450851-3	6.67366045286706	-1.48132178498574	0.928474199283604	-1.59543667032288	0.110614621251496	0.968307815001739	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59366994739539	1.27673210875742
Merged-chr1-60623069-2	3.35137340812871	0	1.48789160866815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11320443-1	1.57289531982864	0	1.52051282723056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134214990-3	4.40271945985523	0	1.49413155022821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109055248-2	3.94894589911964	0	1.54502323669367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102460255-1	2.82023368709429	0	1.47811536884311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64179165-1	2.80056708109035	-1.72639858170725	1.37746117774938	-1.25331922931432	0.210089553052002	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr1-64600838-4	8.08789276308871	0	1.35726730649492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174067964-2	2.02414605075658	0	1.51236130228179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34726372-3	3.73909466843682	0	1.37794594470325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115489529-1	11.8210704155022	0	1.36058608955438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102747830-3	5.30427916911574	0	1.37410512297906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30788340-3	4.43708007784928	0	1.3794390699821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80772755-3	4.16332356841721	0	1.42492474753978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45000936-2	5.31605606152648	0	1.39189189454646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31850520-5	11.0634401237029	-0.674638448486827	0.75161760892887	-0.897582015738367	0.369408430482889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27643187026249	1.45526469271556
Merged-chr2-153122026-4	11.2765995235668	0	1.36468877013869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44718415-3	5.61982133981194	0	1.36886721140176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37666585-4	8.35227601525162	0	1.36452887848115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90808854-2	4.51038824579721	0	1.37398260912158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38904681-4	15.2092258256753	0	1.35735618791392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52765966-6	14.4413233221686	-1.11608295636652	0.734056789712089	-1.52043135082815	0.128402600083213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16523349939429	1.10718024078827
Merged-chr4-48076865-3	5.56406869751515	0	1.36781591468734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66791971-4	7.39569008065134	-0.0361306345370307	0.867064794524669	-0.0416700513793064	0.966761728752768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62581156516825	1.60294768781932
Merged-chr19-18639163-3	9.34957226174148	-1.08325562626547	0.649182682513908	-1.66864529113847	0.0951876973673833	0.882097102908603	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9095490331521	2.67560010212811
Merged-chr4-133707154-6	13.8415842106356	0.445194573264384	0.742206716946271	0.599825578372678	0.548622484737366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67709642602482	2.37439213014923
Merged-chr5-105062617-3	7.61140299600113	0	1.36514722268102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116638517-3	12.9665895924689	0.563449649523	0.526566739541155	1.07004413156438	0.284599444686841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25767122431232	3.82552230900954
Merged-chrX-159510780-4	6.36495347653329	0	1.35704819819861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62231240-3	6.08612244181906	0	1.38761321452785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83609347-2	6.6099773628173	-1.32484337507698	1.00552312769321	-1.31756628822285	0.187648877034221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	0.723581231604105
Merged-chr12-105781572-7	18.1559536948392	0.238613295409002	0.381548878397738	0.625380675763026	0.531721241968838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32164297608085	4.54383284459163
Merged-chr4-62847445-4	9.97694383950753	0	1.36379221486602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101995638-2	4.56367295860414	0	1.36931140286322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94206073-4	9.25926551812914	0	1.34767716853775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38962899-3	4.10222547260207	0	1.37685004182013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56759326-4	5.5881510182386	0	1.37161031335629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12557285-1	2.61430335418704	0	1.42696921332913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49049405-4	12.4478917553173	0	1.36532580537903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71698452-1	5.96495838211515	0.231617984825263	0.817378660585951	0.283366811483951	0.776895666777697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77284030825146	3.03548261097058
Merged-chr10-68075585-4	12.2184778828859	-1.54049163763958	0.724157294918449	-2.12728870985559	0.0333961022537237	0.453834340749972	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59947893829995	1.55482458121103
Merged-chr7-114531394-4	11.2284598292701	0.655633191121996	0.773347486869283	0.847786024075896	0.396557147861808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.87845446409297
Merged-chr8-11486227-4	6.36372325163014	0	1.36191107007034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133157360-7	19.8247167071412	0.277238310994556	0.423395545027732	0.654797421112206	0.512598191256745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98310724185932	4.60920203104499
Merged-chr13-81025409-3	19.7068326447878	0	1.36034158256572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109031797-3	4.60580453885039	0	1.4013131622433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115819572-3	3.71182676328631	0	1.40096319849968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82844027-3	4.21084336539513	0	1.3915358619033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140748547-3	13.3598780806547	0	1.36615800402139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10979376-2	6.00065782055216	0	1.37411691403095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6895766-2	5.96523283746313	0	1.38940652191421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66847741-4	6.68475496383118	0	1.3674833328696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45738126-2	5.35118426553986	0	1.40922133125512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52982712-2	4.27759570252143	0	1.36490661900636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34685080-5	16.2885837595291	-0.394009235874371	0.537336027303417	-0.733264132412037	0.463397346699124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61798959629449	3.90179844305946
Merged-chr2-102820682-4	15.8969772839509	1.17477119124162	0.460607290213396	2.5504832776254	0.0107573684585247	0.211028434513514	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70882412948813	4.89904921992919
Merged-chr15-99116527-4	10.6981312230322	0	1.34654416513014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102377205-4	10.0511444144835	0	1.34809312434682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151187156-3	6.04216866701318	0	1.38402740397812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105020491-4	7.88690668102475	0	1.37171510360324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171453067-9	34.7532658597457	0.785163684690178	0.345528311290045	2.27235702266693	0.0230649552759559	0.3554828193495	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44466844650732	5.23386233896563
Merged-chr14-52119092-12	54.5522287675017	0.419897416567761	0.235850171230442	1.78035663225146	0.0750176143715428	0.76422085825013	C57BL6J_F1_Control-BALBCJ_F1_Control	6.24224260897471	6.68698033082267
Merged-chr2-129912477-4	10.6343273329148	-0.359484687614626	0.485897339238287	-0.739836707437355	0.459399082743015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96383647379347	3.64977134101479
Merged-chr15-97212728-3	4.59002670254836	0	1.41751120689842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59860946-4	6.26983557532975	0.783990123187288	0.837987718252398	0.935562784645913	0.349498343177017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42539729206526	2.17597978119962
Merged-chr18-65692363-8	20.9045630732048	0.0804925599179405	0.380238308878449	0.211689769385314	0.832349070075509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34499084699816	4.44395042584764
Merged-chr2-35827028-3	7.19890333215024	0	1.37064472966908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173487878-1	6.64885602874868	0.275523422833941	0.848577170406897	0.324688705332275	0.745416683759637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	1.60575736942423
Merged-chr1-120020646-8	29.6204592325624	-0.103225881468722	0.380469263605363	-0.271312012146641	0.786151068484588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50291988166715	4.36416687234224
Merged-chr5-3509663-4	7.76286696611192	0	1.36777766029678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30695372-4	12.5750713326908	0	1.39114817998927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105546763-2	2.40913580814715	0	1.5516522717754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53170450-2	2.61431205210153	0	1.46986360534931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73967837-1	4.02595014024178	0	1.4306101628062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-9052253-2	4.6540815626347	0	1.37508821010785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172477972-1	3.81238171229092	0	1.39748278828075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-7954189-2	3.73820253933423	1.10109264349652	1.06804869449603	1.03093861653572	0.302569606119363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.31037834433945
Merged-chr1-33877920-2	3.67683307730693	0	1.38499179786018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110711577-2	2.96255910793015	0	1.46727209534097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70568844-2	7.81583443366265	-0.57002547256321	0.612796326708352	-0.93020380135944	0.352265574075822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58734547919981	3.08356688118183
Merged-chr17-79488038-1	4.59059132585845	0.318492446918854	1.12936445357401	0.28201033414054	0.777935586284602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53823966306787	1.64228623024364
Merged-chr11-48813293-1	2.08067990104036	0	1.44825449210837	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125637030-2	9.59215430416603	1.14921407382984	0.758518821243073	1.51507654344883	0.12975302111034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10380936944073	3.47408581596872
Merged-chr12-33057444-7	25.548762400878	-0.0723661046755993	0.341144983268729	-0.212127125488446	0.832007858142292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54078835560095	4.3418695391706
Merged-chr19-11740380-1	5.50983584745617	0.895395275350392	0.848578949762668	1.05517026506587	0.291347460819681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	2.00766992357472
Merged-chr9-41168824-1	2.70254818385956	0	1.45022877592844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53817991-2	3.62705738676934	0	1.46641463274996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102221923-1	4.18255655244312	0	1.38360856519088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58030089-5	15.5108788685186	0.0487927393646259	0.388844077788177	0.125481503131457	0.900142367654284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61263090149842	4.60160213133387
Merged-chr5-103715142-4	9.59703688655487	0	1.36265438036366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38372660-3	4.89948847544228	0	1.40521944745891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44196525-3	5.86074950069151	0	1.35769228521396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35564202-3	6.42918992228962	2.66209347803538	1.19913283701383	2.22001549441739	0.0264177158478992	0.390696595454381	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30139522650344
Merged-chr19-57354887-3	6.12785443153456	0	1.36427938555712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70627197-4	15.5456554029887	-0.132200958821772	0.592516800645855	-0.223117654516581	0.823443938350817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12134360384903	2.32865955880796
Merged-chr12-73369987-2	7.75118524259653	1.398198958952	0.80274803825815	1.74176565038501	0.0815494595478855	0.802779259609472	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97271257483112	3.2402917208312
Merged-chr1-77227347-4	12.3237917937276	-0.757029017732798	0.723453530137387	-1.04641001280211	0.295371771852037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8441881967244	1.43996574690471
Merged-chr7-122945370-4	6.68313276936383	0	1.36477887253519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84354553-4	4.49621345312856	0	1.39230995427859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81199567-2	3.94875305665703	0	1.39025460493147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45090243-6	17.6687154696425	0.915053004153553	0.474512473293034	1.92840663977333	0.0538045665997955	0.619915734590564	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05514898542474	4.02746560910679
Merged-chr4-84862135-3	6.47091349740388	1.79209398854614	1.25296339038816	1.430284398007	0.152635410853953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr8-11219456-3	7.99831500859287	0	1.36657061915692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124470781-4	7.23423388668829	0	1.39266896974255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107939595-4	7.22586786862508	0	1.36234275221601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24698143-1	6.75558207651285	-0.908072885680751	0.854238606442463	-1.06302018994726	0.287772795439511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61076849167644	1.30139522650344
Merged-chr2-60418280-4	5.1745307737982	0	1.38745656887348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180604779-3	3.08159231309115	0	1.40835950145067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94161816-3	3.94486834450407	0	1.4018633071239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8051635-3	6.57058087912224	0	1.38156923610639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8109181-3	7.5105790371997	0	1.42202546637826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108309561-3	3.65314719179402	0	1.44824781656785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99496215-1	7.1869281542644	1.71876325127038	0.657312036704616	2.61483611328231	0.00892702782985195	0.18628188322569	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28679704799357	4.9041104279637
Merged-chr15-73644106-3	7.78480242915276	0	1.34570050570129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107676557-3	6.63633497792704	0	1.36053190148252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-59040150-3	7.19135626769075	0	1.34969189766534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35359588-4	18.8414989023729	-0.608577565648111	0.443708818921433	-1.37156968646114	0.170197435954464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03285223359924	4.21190148319797
Merged-chrX-113172921-5	11.5421812573431	-2.33621225461311	0.780510133400258	-2.9931863208944	0.00276081146392693	0.0796153582852011	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80488283552628	0.897114879832661
Merged-chr6-83028746-8	24.8301135483243	-0.674807248288686	0.383827609930677	-1.75809981051275	0.0787305280252546	0.7877255241901	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94855882585292	4.28428222543895
Merged-chr12-45081784-2	6.0545323629928	-1.5096785545324	0.925104496659932	-1.63190056905253	0.102700434148086	0.927225617146595	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10822668382129	0.662147012823607
Merged-chr16-97431463-4	7.41786566506809	0	1.37923935985148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105171230-4	11.6483483856074	0	1.3627893930341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5804544-2	5.53811316476449	0	1.38468950339954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167943050-4	9.37869343867462	0	1.35091717141415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49504158-4	9.41255640103022	0	1.3516732318231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148440024-4	10.2216913169891	0	1.37730714362423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84799482-4	5.39438529710662	0	1.35676350312719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36379465-3	5.92674313959256	0	1.42539317671946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11093602-6	7.69064822225111	0	1.36295038744878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-70546079-3	5.59517321073505	0	1.37701330524465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87755084-4	6.42421831689727	0	1.35484293386762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-129782067-4	7.8319380670629	0	1.3578234353434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-56434735-2	5.12370066946229	0	1.37148878095035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73324491-4	5.96194736913621	0	1.38488605452243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6369978-4	5.99810547615725	0	1.36938871584503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165739253-3	5.5595649219317	0	1.36593926886427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59499477-3	7.95151907036511	0.364702606441408	1.014270061426	0.359571499062745	0.719167600360938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.62787736906723
Merged-chr15-78863287-1	4.6402681524497	0.619877642968948	1.41421183901586	0.438320218985237	0.661154171062177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr6-97293370-3	12.1514515717426	0.746338347243518	0.501654098473141	1.48775490824277	0.136815541275593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55375942962588	4.16106939265778
Merged-chr3-9598212-4	5.93831394149549	0	1.37200773753912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100960877-3	5.71114303848416	0	1.36492392891203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84705643-3	6.34159461623262	0	1.36018643050674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53227893-7	41.3019633584341	0.942332834799024	0.464238420218438	2.02984672047528	0.0423721222364636	0.526856694307373	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37126433462253	4.08449997875656
Merged-chr8-22934626-5	15.210765019177	-0.0169044666544709	0.654687485983039	-0.0258206656097729	0.979400378570259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10209846903774	2.21337923774067
Merged-chr14-47506911-6	14.4016878363205	-1.35314128986124	0.994085935616649	-1.36119146381631	0.173453191067832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4944959016211	0.577068348605183
Merged-chr1-119495140-4	9.65697893583886	0	1.36105090454061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16696775-6	19.406458498921	-1.68533135476279	0.480190422745796	-3.50971463596844	0.000448587844639229	0.0198735017495875	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78585182105195	3.14698198213049
Merged-chr9-115487314-7	19.6834320589677	0.308917955415363	0.463131349097948	0.667020179085371	0.504759244036791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81724152351451	3.98224006027726
Merged-chr13-49381432-3	6.68444839806926	0	1.37537817757737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32147695-4	11.700579692782	-2.2130111781158	0.711774358260789	-3.10914709476647	0.00187628281387087	0.0593326686906379	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00545899478118	1.90216338684418
Merged-chr11-3190326-5	18.4490025486932	0	1.39666649580801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68472646-3	8.22485177945448	0	1.36904987546355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-123887906-1	1.59764570616231	0	1.48561149000669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36360266-3	6.37199324084687	0	1.42171840561882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62174713-1	4.47921887813068	0	1.39850106243336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-4908791-1	3.28028499307567	0	1.38382472532738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101192965-1	1.66695752721949	0	1.56211669904191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86421575-1	2.65225906930875	0	1.47437452753175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123153045-3	4.96773111556667	0	1.37287652831454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62894681-3	9.12725032351043	0	1.36059269478335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85301491-1	5.74833239155514	4.6732399465612	1.2270791457791	3.80842585634038	0.000139854266847082	0.00774958011370086	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.16629917519701
Merged-chr1-16231780-1	3.30654328769168	0	1.3829173162858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56079803-3	5.38562117453487	0	1.40228944557918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88392608-1	1.72194932908532	0	1.72946798503923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44118021-1	3.94998069953051	0	1.43130897295355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62908213-1	1.36465425568383	0	1.66580800735491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66437547-3	9.119138817948	0	1.34958566143283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132008251-4	6.40888099682427	-0.696945877401645	1.35812475750413	-0.513167787827123	0.607833956559171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr10-121489304-2	11.0863304363091	0.798206342695154	0.707135502238058	1.12878838662302	0.258987112875472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85463309029571	3.50318099142057
Merged-chr13-5866385-4	12.1864482660257	0	1.40325676965288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46896154-2	3.09245839026738	0	1.42842558795228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-52429624-1	1.94208944544612	0	1.46197765316077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137560828-3	5.73727078280052	0	1.38962630463226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58072589-1	5.83664923802273	0.94073046347157	0.855358506766856	1.09980839148652	0.271415615354475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9450324219075	3.10052746798604
Merged-chr16-25052602-1	2.65022170859741	0	1.40742490577002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93023675-1	4.36674895962651	1.62261125828792	1.30279213205547	1.24548745602866	0.212952623643815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	3.27096416506611
Merged-chr4-134653051-3	9.32053978114233	0	1.3599821500381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-121429716-1	4.04615700600835	-1.38708463335964	1.19423492170574	-1.16148389914645	0.245445167183487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73531645649947	0.765562747387088
Merged-chr12-30654132-1	3.52298791989996	2.07840250806139	0.986835497300025	2.10612864428558	0.0351931792802335	0.469809929394454	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58148496924487	3.94114384255688
Merged-chr6-119472886-4	5.00230168354019	0	1.4401849562093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13746543-1	1.7923425488151	0	1.58085675050967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39976661-1	4.31894316399601	-3.5897873511138	1.01452626940533	-3.53838777700451	0.00040257836622896	0.0183015063471639	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34927108076938	0.765562747387088
Merged-chr1-155065951-3	6.83448447752821	0	1.36577372725362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105468672-3	9.54332207930039	0.836349225280925	0.821135208078307	1.01852802930984	0.308427087390737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65117231954624	2.59128389355622
Merged-chr17-27851012-10	47.9952207939532	0.0258561934150717	0.368284850201656	0.0702070514193403	0.944028861955869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42522107181038	4.36318708161898
Merged-chr10-8683157-3	4.56709754222431	0	1.38813743389922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87967887-4	10.0425845360371	0.627378623137118	0.610479421323725	1.02768185334855	0.304099506631478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30492589888769	3.30459792214267
Merged-chr4-3724896-4	7.43498953296725	0	1.36326630943544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-119806292-4	9.20595583230767	0	1.36401221639995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43843664-2	6.56927251579905	0	1.3794956882218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115924537-2	7.15120343126874	-2.17257060444616	0.812202530771321	-2.67491237977669	0.00747487832824882	0.164238848441907	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59066150707529	1.25298535761957
Merged-chr3-95707731-5	13.2601484075541	-0.196587678740476	0.682742892701472	-0.287938081585322	0.773394135868724	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.55698213282952	1.67656321522231
Merged-chr15-101298170-4	6.05303214676601	0	1.35722060161939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-67001301-4	5.17474628405486	0	1.367915718483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80170465-5	15.500038786471	0.049126374288067	0.552374483320292	0.0889367191488844	0.929132201503402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40971363916967	3.83196746029228
Merged-chr15-63922359-2	3.74719717901753	0	1.44237817038261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151025334-4	9.5155776856979	0	1.35876132693069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37592280-4	7.19885461494817	0	1.36665052802254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57431499-4	10.4822377342805	0.593367229247058	0.6962262770646	0.852262042950731	0.394068668080826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31666001085375	3.44550143446267
Merged-chr4-135240490-4	7.77148671448919	0	1.36516658605772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6369184-8	20.0325798892443	-0.12800891825214	0.406596863403436	-0.314830068241639	0.752890680627324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1413785250021	3.96078347723784
Merged-chr15-63545833-5	21.5099106226108	-0.56856312513526	0.41452303649395	-1.3716080291802	0.170185492954795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5210645503526	4.94878882797403
Merged-chr13-83074738-6	18.8607613089725	-0.846464831353672	0.44866598350224	-1.8866258251768	0.0592106707006944	0.660638926235436	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7796325324264	3.61626047987642
Merged-chr15-36903527-1	3.61850585736685	0	1.39952253968939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141381581-2	5.35661788762804	0	1.38702749726977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80072093-5	32.7331031754758	-0.22161393691241	0.494137739117282	-0.448486159564126	0.653802372632065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53413956843275	4.10955917125
Merged-chr17-36849665-3	5.97275671492191	0	1.36241112516908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67260212-7	17.8464924413338	1.79004683225337	0.551813263256488	3.24393585918818	0.00117890290036434	0.040869886964863	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21627226133353	4.22829375040494
Merged-chr10-123085465-7	17.5907026813513	0.395825672379276	0.529983807896254	0.746863708818742	0.455145834303785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94566139986352	3.94340495185225
Merged-chr5-104955455-8	26.0977369909016	0.212048957929626	0.561725814547782	0.377495483451007	0.705805420231954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56552969900033	2.99694611551312
Merged-chr6-83599035-5	8.66928066578602	0	1.34293207315828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117374150-12	47.4242840966531	-0.332074923834601	0.347962743141137	-0.954340458512559	0.339911334736147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14435291624332	4.72415965382044
Merged-chr7-141369049-3	6.47522916115599	0	1.36495392276859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75575475-3	11.1598575592956	0	1.34388300073692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106787541-4	6.2613071150722	0	1.37539329154832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85061806-4	12.7843238877541	-1.36922528319461	1.0467547348739	-1.30806695931455	0.190850598997569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03280651306513	0.724326877898254
Merged-chr8-120704430-3	4.3623914061079	0	1.39163943428142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33776909-3	5.12726291615505	0	1.41436566203535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166522730-2	5.11298611620501	0	1.41049986100245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38928887-1	2.52156116288934	0	1.46415968200601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8704998-3	8.25827783866239	0	1.37645792092712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124056520-4	9.74393765881425	0	1.35507098150289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24501646-3	6.88674912612952	0	1.36351832771346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66792346-1	2.65600201210607	0	1.39243817431656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69071734-2	6.69989270222892	-0.552474803023454	0.847117222214719	-0.652182234684184	0.514283619013668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28083073713509	1.54998568242928
Merged-chr14-57357202-4	5.53780748255079	0	1.38319282655482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61511532-3	5.73695330819061	0	1.3786221468825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90061199-6	17.406282915781	-0.328026578448848	0.495654772873789	-0.661804538967639	0.508096496822397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03294832782307	3.57425170215141
Merged-chrX-106035886-4	5.86931894961858	0	1.35698716621316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102028173-3	6.43627960829687	0	1.39442501459506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33203775-3	5.97935690476964	0	1.36120383936079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90930082-1	3.44403403593591	0	1.45622598957425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78791522-2	9.11160408904247	0.576037092097003	0.983688914347981	0.585588679200292	0.558151957823502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22237730641564	1.33175291456033
Merged-chr11-3148291-2	4.70573939039345	0	1.46891091691647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125137249-6	17.8693744109276	-1.53953115098627	0.562607742349581	-2.73642012915931	0.00621116708696083	0.143323371454419	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35333803983128	2.41901907969411
Merged-chr14-51062987-4	7.5947727095536	0	1.36389693751803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108464988-1	2.18976990443212	0	1.40462495739317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13293885-2	1.73514647895085	0	1.72971121378837	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-19675732-4	27.7964095123347	3.3061043002134	0.805413596458169	4.10485285417591	4.04572314155687e-05	0.00278029664035259	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81609453980796	5.19930111397668
Merged-chr13-83715183-3	6.82205472374588	-0.035400961994153	1.38406931551115	-0.0255774487573832	0.979594373469506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr8-71579237-4	6.90229435181725	-0.73564083413149	0.916380431045501	-0.802767943540867	0.422108873756822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12216108640681	0.94927122251658
Merged-chr3-19451196-3	8.71425952428893	-0.798323659238921	0.804938146126073	-0.991782614702775	0.321303580201846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37360508838824	2.42163209497338
Merged-chr12-79060973-4	8.38200678951833	0	1.36656697753691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74371875-1	2.95617931019329	0	1.4490286154683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32489954-3	5.4609346559076	0	1.37031183967577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50552176-6	18.3840659705022	0	1.34353044358807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103793582-2	2.72307012434244	0	1.42434654467893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26765068-2	5.51723440061291	0	1.36932524435248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140771819-4	8.33166015265956	0	1.36000904019176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129001557-3	5.8001822380447	0	1.37057268437637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41212846-6	15.091108742135	1.49337631536215	0.512821267944207	2.9120795269447	0.0035903121339562	0.0974135503620844	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37441905672497	3.82652470223936
Merged-chr2-160252138-4	7.88529392217914	0	1.38248048638647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-58383469-4	5.44442780424114	0	1.37168109705638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43549474-3	8.1945143508299	0	1.36636480186855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6472967-2	5.02737367297812	-0.035363735563167	1.43751137221535	-0.0246006649037273	0.98037348894471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.601513806634888
Merged-chr2-172406346-3	6.04954235037794	0	1.35571301970552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136815550-3	10.186071656574	4.30755396927787	1.06125151977937	4.05893785685544	4.92964290812775e-05	0.00327192257439458	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.42625706085586
Merged-chr2-90528030-3	13.3961370000424	0.932495493063379	0.497320245226814	1.87504028242022	0.0607871819844654	0.672431914019853	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26211881241837	4.04636868880755
Merged-chr13-47288654-5	16.8644335802996	0.265826265209333	0.507246294117049	0.524057579705042	0.600238491983812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78463369424345	3.67250221293744
Merged-chr14-73123117-2	4.26300721712076	0	1.36827429906544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191110848-2	9.21721972578018	-0.113781748080411	0.640582561771236	-0.177622300185319	0.859019610013873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88530714754549	3.6030572230204
Merged-chr4-133847941-2	4.68417016991257	2.06690042508714	1.25599994183727	1.64562143375874	0.0998417234891523	0.910467412707068	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.30139522650344
Merged-chr5-12161404-4	5.72471513076484	0	1.39758472014115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12137187-3	6.7619392228772	0	1.35889228374209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47672617-1	2.64111782058124	0	1.48567260851164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32602889-3	9.49106103794145	0	1.35412150920241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17393164-1	2.14178322330806	0	1.45298621896979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86893250-4	6.51561737445305	0	1.35853225022422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95665215-3	6.19561926318631	0	1.39560048993489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3525926-3	8.93238186866076	-0.0358310288385907	1.04173395688007	-0.0343955657794841	0.97256171937671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.02674429890598
Merged-chr8-122938752-3	5.40621573854849	0	1.39821950549544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62643110-4	5.51317666570625	0	1.37213217078203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136581604-4	6.64935293682853	0	1.38848146273521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110417445-3	5.44097789343367	0	1.35983575994835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7776509-1	3.09750593238062	0	1.39812155949483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157433618-4	9.03688819562216	-3.76408901205035	1.07457595068623	-3.502859904548	0.000460291485277988	0.0202108116706188	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40665316105196	0
Merged-chr1-136633856-4	6.70472156294423	0	1.38090232946903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33205528-4	9.45118404521989	0	1.35840786256468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88230958-4	8.92783436115986	0.886383232525302	0.676050935559651	1.31111900879411	0.189817559568999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	2.95663825225418
Merged-chr1-167554181-1	3.25990922965527	0	1.471465601977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41350109-4	11.7709331083235	0	1.34849210242903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139286124-6	13.2774001189894	0	1.34283087242485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59623503-3	4.41601040152563	0	1.38737747560898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53684162-3	4.55733723819753	0	1.40903366613919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59028116-2	4.11237290116938	0	1.44127989662295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84858350-2	3.973007954485	0	1.38049802060678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9505990-6	16.5730911598744	0.891838432463347	0.62046910092817	1.43736155616651	0.150615286394236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00523365194985	2.74024820630341
Merged-chr3-69976369-2	3.34385309908807	0	1.39133626292571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33076750-4	16.3382539659606	0.818328773083759	0.468414483313071	1.74701851081923	0.0806341272353448	0.798395359268872	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55683294381108	4.30146124330616
Merged-chr15-79409447-8	24.8173966698735	-0.095838437638828	0.398725103459309	-0.240362186396946	0.810049489883053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00629504277429	3.97851367167612
Merged-chr17-78400289-2	2.77802768558662	0	1.43071549009475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102784636-1	3.35643150485763	0	1.38290528438495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103434356-1	1.69396203858258	0	1.61353038092255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40938584-1	1.32342328898593	0	1.58363432015848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100439282-3	5.42482307773776	0	1.36909909973805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41038253-2	7.22247279564862	-0.0648875100324148	0.689751472694934	-0.094073753520079	0.925050569557235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78236656153271	2.82323356651535
Merged-chr11-119450272-1	3.1849744732459	-0.089862735742625	1.24701008838521	-0.0720625571353562	0.942552123800353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.67591700901439
Merged-chr15-15102393-1	3.45458617980158	0	1.4190498446781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128715289-4	7.03314443827851	0	1.39569225550184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-14713529-2	5.12279517321577	0	1.40338820621159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76914023-2	8.93174022888763	-1.18327027443337	0.724022099095754	-1.63430132299992	0.102195596035127	0.924488334976447	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76830674180609	2.06239089973625
Merged-chr7-127165803-4	6.96578686276917	0	1.3520452409245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21820376-4	27.5917501234533	0	1.38823178507732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65113945-7	12.6437661608959	0	1.34073119521872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31732168-1	6.41163554598407	1.26041120131358	0.774683976118519	1.62700048041364	0.103736995757988	0.932689274298459	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	3.21091134830261
Merged-chr4-102557272-1	1.97632377831493	0	1.47944153636943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83182174-3	5.78159218471187	0	1.37441638788887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75001673-1	3.88063907890793	-0.195785911630585	1.08513225614454	-0.180425851800046	0.85681826054404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51089815723126	1.20027794713453
Merged-chr11-71888680-1	2.17819461216638	0	1.49325852146891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191242260-3	3.47812470003194	0	1.42080688348175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88456895-2	3.03034288284951	0	1.41172268008031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17450188-1	2.69766879792933	0	1.44868593088422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41933083-2	5.44747169622979	0	1.38820891919939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79626404-1	2.1484984071643	0	1.64779679096263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59844659-1	2.05858136823174	0	1.42212446643038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55426021-1	2.25861602706709	-1.78606600123478	1.3161914766296	-1.35699556861468	0.17478261855704	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82709613805758	0.953310774576147
Merged-chr11-101003254-3	4.97097352331681	0	1.38769955703654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64038335-1	5.84783379894869	0.1963927226665	0.865039530421015	0.227033234620983	0.820397899356197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93399614274172	2.57176845361395
Merged-chr18-56359013-2	6.98984517467496	-1.77863312523429	0.983947847061481	-1.80764979622254	0.0706610228070056	0.735966092793786	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16318252143804	0.723581231604105
Merged-chr14-57537820-1	1.91284792483671	0	1.45497903912296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108531405-1	2.60393281850742	0	1.41283928745628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91758395-1	1.74459452885817	0	1.5038810183648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61698916-6	13.4754844354234	-0.662986774281102	0.549010936774969	-1.20760212569836	0.227200341186048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96983777006511	3.40181164327157
Merged-chr2-75998128-1	3.65216392946601	-0.123387910614752	1.28748969049242	-0.0958360377763958	0.92365079506949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.841757702988201
Merged-chr12-84178229-2	3.01574334741601	0	1.39676524125287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28175564-3	7.01271086815096	0	1.40002823328196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80641692-7	30.006918076363	0.481023791849167	0.334480885413572	1.4381204213042	0.150399889321437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32340923288693	4.69715198512155
Merged-chr11-114998215-5	18.4145364191961	0.420443569585265	0.493180665614915	0.8525142993208	0.393928705968268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40696885927468	3.83196746029228
Merged-chr2-90655685-4	6.12578034984383	0	1.37681289901692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35729707-3	5.56947461910407	0	1.43115706614087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92296608-3	5.93994757648434	0	1.36201548160035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30532235-4	5.85516610617886	0	1.36714537329347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128771255-10	34.2770726949303	0.15650241735303	0.33516310483424	0.466944049317215	0.640539908819245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79298028059346	4.9957339612783
Merged-chr12-100609974-3	5.80962992640741	0	1.35419171134081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42101605-3	4.74781451401828	0	1.36336750761964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114292149-4	16.7519547409755	1.40448495198948	0.591906941846036	2.3728137865881	0.0176531613167538	0.295992657624127	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	3.75010077895362
Merged-chr3-152928788-4	8.52039693501906	2.39724764853114	0.734412678754003	3.26416974799276	0.0010978536880562	0.0385530167181762	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	3.75739824751616
Merged-chr8-68908592-5	24.3097786268821	-0.110119370600104	0.470941463072998	-0.23382814900508	0.815118395527099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53517497654733	3.83543985074701
Merged-chr1-105986540-6	13.7979237694005	-1.35506109931397	0.641276527775351	-2.11306829522485	0.0345949228504016	0.464906158522863	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88285023239858	1.55081194879892
Merged-chr2-160069034-7	25.6677264800007	0.993207359252863	0.507730890485123	1.9561688639899	0.0504452650585543	0.592770030980967	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4248088037225	3.09289979094681
Merged-chr4-108369790-2	4.09271362969508	0	1.37025909132946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34096531-3	8.57705517637593	-0.0562503856445347	0.706874723589359	-0.0795761734963548	0.936574345903086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14628950319902	3.401789758225
Merged-chr11-88161808-3	6.61716780709298	-1.04559200788881	0.974065773964695	-1.0734305996945	0.283077961322309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65013357957091	0.97908007631626
Merged-chr11-4714961-5	14.9984866128539	1.10084339139142	0.430021205910377	2.5599746623213	0.0104679795033024	0.207145576199495	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88565313643894	5.09494346206048
Merged-chr10-8238817-3	3.9499490070639	0	1.36875591861338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7869458-3	5.41943650641656	0	1.38774295093877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137365888-7	30.5794399579475	0.0101378469226553	0.38252861622508	0.0265021922351821	0.978856785063651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07427190776655	4.29559434247387
Merged-chr6-125447304-9	39.5816254855636	-0.37508834999599	0.351982563908724	-1.06564468941495	0.286584289371657	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29256621617028	4.93441301011036
Merged-chr1-43911995-2	4.11231984357676	0	1.38054044735195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151105423-4	7.26027733816586	0	1.37234596821479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72319366-2	4.21784071760979	0	1.39624673327303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35975826-2	3.8526255411021	0	1.39763427866578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17975427-4	5.84613618639664	0	1.37190203386424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17346423-6	17.3354789034123	-1.7056205310234	0.484870364191302	-3.51768360573685	0.000435331074009626	0.0195032090092025	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16995998093767	2.63928872602424
Merged-chr15-4042572-4	6.95223418253954	0	1.38257991446009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79178969-5	15.6306635955502	0.194278146640827	0.618709798445396	0.314005285077077	0.753517024730128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38863282318632	2.01818211024981
Merged-chr15-31460780-3	6.12729996510116	0	1.38745497614799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31087403-1	4.80514883268896	-2.24225498196296	1.2566193753819	-1.78435493347499	0.0743660091535016	0.759861257814886	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr17-8920536-1	2.45326192181605	0	2.03215225026711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117199673-1	2.47102334935789	0	1.63838926318598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82023527-1	3.73512667766691	0	1.41117288346817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72331380-1	4.73929156801639	-0.69289399555363	1.39668294870005	-0.496099702655161	0.619824069003885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr14-70541106-5	13.5522286627812	-0.738918048438687	0.542145165248885	-1.36295238951263	0.17289751600462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99041761191436	3.5558328929698
Merged-chr4-138427546-1	5.83759330572602	-1.63804916687469	0.998233610528908	-1.64094771964929	0.100808268087756	0.915442139155085	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89171528332204	0.956353103033036
Merged-chr1-161195869-8	25.0908052187063	-0.493622749710291	0.378310259959733	-1.30480931117975	0.191957787767698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67566296930165	4.18196043469054
Merged-chr12-54577457-3	5.08745683900923	0	1.38354586880939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55710051-6	12.8277431216594	-1.42911461575613	0.938504285246715	-1.52275768818726	0.127819339320395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4028653962853	0.662147012823607
Merged-chr13-37561064-2	6.46592106459184	2.65209248205784	1.17519621061113	2.25672313960126	0.0240253800192542	0.364447275359345	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.59173462754619
Merged-chr7-97383647-2	4.07094084469946	0	1.38259113542178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-13031790-2	5.14742830309488	0	1.40422874442608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153968787-3	5.66485910571156	0	1.37959801919856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68361241-5	15.2750242437798	0.558873561107241	0.557240754041704	1.00293016448222	0.315894557342205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23276419112574	3.79785595548153
Merged-chr2-154220104-3	6.04430429229339	0	1.35932844566863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72323231-3	7.36128162242283	0	1.37454855634714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134304851-4	7.12249392187903	0	1.3604620987133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62231579-4	14.5945563178037	-0.0748953896454129	0.484179363785353	-0.154685216362537	0.877069485337303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41539419050915	4.44974705330424
Merged-chr10-96001118-4	6.59948385639827	0	1.37858454427044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41980922-2	4.88771607603935	0	1.3655543148505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138288942-8	23.8210899425656	-1.06312424739258	0.401166054334353	-2.65008525997197	0.00804714603986167	0.17340250640789	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93901912564017	3.92445935992475
Merged-chr19-40700141-2	3.77871242957111	1.11640646088737	1.35612638760678	0.823231869160475	0.410376149086993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.67591700901439
Merged-chr2-4461043-3	8.74459632579406	0	1.35005496563757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31260904-2	3.76453407922847	0	1.5023603572885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64066209-3	8.72176100403437	1.63762236092653	1.36767394453596	1.19737775766589	0.231159349047718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr18-26932455-1	2.88528122845562	0	1.42362922071373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137660176-2	2.02093853725954	0	1.64207266012909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70572643-2	5.95389811662728	-2.37552601577094	1.16955265599848	-2.03114071314976	0.0422407224721857	0.526160273342242	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56112970471021	0.413263464506793
Merged-chr5-129955091-2	3.36222784021874	0	1.41765533118476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63111176-2	3.05795782512686	0	1.44119555680168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3342507-1	8.92633768361663	-2.42235453780518	0.756871716953911	-3.20048230571244	0.00137197793095902	0.0462065020961246	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93538574264725	2.09090111698119
Merged-chr4-42879801-2	6.48426613073774	0.940775874270305	0.87066841990288	1.08052141637944	0.279910055190052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93717404318333	2.81428474015231
Merged-chr9-72654768-2	4.27255776049937	0.853527320513991	0.981562430214757	0.869559891699652	0.38454096453537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.14086229696128
Merged-chr8-34817893-6	19.1098287810229	0.432412004235956	0.366135663584332	1.18101580163703	0.237596446051717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84759204264032	5.25998732471044
Merged-chr10-96732207-3	5.43391413009276	0	1.36815931439913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115488920-5	14.8287998699917	0.480432004701752	0.485741055680654	0.989070203317562	0.32262879486331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29602312433432	3.59039748006004
Merged-chr7-114020861-2	6.08908797100077	0	1.38427334590082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100683243-4	7.41156473929216	0	1.35000044462128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14815854-4	10.3738924628526	-0.947818287424725	0.830227666596388	-1.14163659627294	0.253605105581788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	1.50549197367979
Merged-chr1-37735042-4	5.17095783481619	0	1.37135238618947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133825837-3	10.3308596830857	-1.20785485803918	0.588263871144909	-2.05325350966803	0.0400479971931305	0.507609538702637	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51431600661893	2.54428568440289
Merged-chr5-113398160-1	3.50362326521281	0	1.49255816577891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100006046-3	5.08900550210066	0	1.35640441682296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103872161-6	13.8996945943808	-1.17059045798299	0.468883805955777	-2.49654699760179	0.0125409049281218	0.236055568356513	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12570913435977	3.10239221074919
Merged-chr2-73509809-4	6.30834449723546	0	1.37780479342819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21707036-5	14.3681624593229	1.03385848650257	0.503373970094355	2.05385766433012	0.0399894698733475	0.507240561847799	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17941573849635	3.80712210330407
Merged-chr19-44313340-4	13.5414341335164	1.48461541333979	0.575806376721273	2.57832402237956	0.00992808539628603	0.200475777881394	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89258880280045	5.25407105478886
Merged-chr8-68993506-8	18.6439447215679	-0.37497135295147	0.576324724651868	-0.650625137031858	0.515288499702985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81534663182013	2.38004128125153
Merged-chr4-135318167-4	6.08327441214263	0	1.37914295274475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3171481-2	10.3472552632411	0	1.40282417297376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78674848-2	3.3453365128948	0	1.4135758413787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132347773-4	9.9081824873326	0	1.34966115574841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53010944-1	2.37986994171325	0	1.46740605103829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20228069-1	2.37698330050694	0	1.45604400428179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32793971-3	7.67435435501965	-1.75739178244315	0.982943997480356	-1.78788597005321	0.0737944068899166	0.756748310372159	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66210910851734	0.724326877898254
Merged-chr10-111067721-1	5.54872541046695	-0.495348290156879	1.03516169290849	-0.478522624581577	0.632278275253735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79257770822194	1.29646248785177
Merged-chr11-44438507-3	8.64052574950748	0.875601525424153	0.771221949969714	1.13534310772475	0.256231587034228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79296600897344	4.02446827259403
Merged-chr17-65961679-3	4.27761720852047	0	1.43903002728421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83754538-5	12.5382519446655	-2.48571978088191	1.02773546931552	-2.41863772838104	0.0155787467300491	0.274016030149872	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64377392362142	0.55634759613363
Merged-chr11-89051980-6	24.4742466050895	1.14663169417504	0.449464601392698	2.55110567244254	0.0107381761969482	0.210837009440848	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06037528657338	4.40520102583579
Merged-chr13-60480014-3	7.11862690356729	0	1.37603612013752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35890917-4	6.26629489788899	0	1.35942380613004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129306248-7	35.0308885749228	-0.561638520467584	0.361584199789165	-1.5532717436079	0.120358227826648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6838172388088	4.12402540986599
Merged-chr5-122770991-1	2.90759131971604	0	1.37994698281708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95846573-1	3.94516738617937	0	1.40551596748534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29200044-4	5.77088600895631	0	1.36121775711617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107399579-3	9.7023352825055	0	1.34931652769998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91869239-5	22.8219820209359	0.360813363717732	0.408910049632292	0.882378322670693	0.377572254242063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7498104927649	4.08413588530352
Merged-chrX-77534008-2	3.35727364377075	0	1.39553432292479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23436513-4	9.85512871650732	0	1.3613786277146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87260961-4	13.7268503156566	1.11077813412155	0.577844906083167	1.92227727964375	0.0545708772942743	0.626401998566364	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86829562625364	4.51832585301522
Merged-chr16-29454982-3	6.2952335108394	0	1.3610142092301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135618181-2	10.6333432790463	0.805960971098891	0.554668945402258	1.45304866583867	0.146210242438103	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42585300114893	3.86500317342401
Merged-chr18-5349008-4	9.37451781031467	0	1.35044265866484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55874926-4	5.53238764024286	0	1.37493307427719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72518677-4	6.31762080348564	0	1.39664935958614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59620104-5	14.8657232179588	1.15839141610328	0.549824735178109	2.10683758294001	0.035131660520533	0.46929128822611	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21702790026272	4.37993081329852
Merged-chr6-135350292-5	20.2294202567746	-1.98139356610871	0.517377252619031	-3.82968821315324	0.000128305718814414	0.00723503171061484	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72416646792555	2.66240516414822
Merged-chr17-28707446-4	7.21874866971017	0	1.35458084483493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88458881-4	10.0001582955206	1.50265848141872	0.793039401904502	1.89480935979985	0.0581176627453005	0.653136112898819	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	2.69771006936856
Merged-chr17-56251651-4	6.53428346078082	0	1.38957533662738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78268053-6	17.1182757807276	-0.257149582458336	0.545477442429405	-0.471421111958477	0.637340042543826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34385981813042	2.56094087055015
Merged-chr8-92849798-7	28.2428180038297	1.35563052832558	0.426391012219294	3.17931309403018	0.00147624540073057	0.0487528698288657	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31477698059006	5.63591469586376
Merged-chr15-72837931-4	13.1638819910045	0.0222919044865771	0.501964908521853	0.0444092885939389	0.964578157727654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53145006446512	3.52894022379359
Merged-chr16-5244633-4	4.93604180112392	0	1.36272389702919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5517471-4	9.0522512790021	0	1.35495782764688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115624249-4	6.30359177424974	0	1.35991851289698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74823743-7	23.0832664198468	0.40032227360459	0.433331561149445	0.923824409518441	0.35557774420632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54495540770077	4.58496246195945
Merged-chr5-90020238-7	21.222471691538	0.286690925989538	0.344332140548588	0.83259995867009	0.40507038232186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42853344330102	4.721531444531
Merged-chr11-85524402-3	5.39219899867782	0	1.37546539134175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24781020-3	14.7480175374471	-1.08222247017222	0.462656970281196	-2.33914658092033	0.0193278486294547	0.312970665370429	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02130862739427	3.95569883921644
Merged-chr4-132806980-2	4.19365698569554	0	1.39632507008857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105785256-1	2.31999494496982	0	1.48710197385202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51239710-1	2.18747858108617	0	1.47359448929783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86173866-1	2.52492926485138	0	1.4756518716358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8899376-1	3.06381029554023	0	1.55384442842923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22700112-4	6.58736762840483	0	1.35746624826184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76551498-1	3.30099041048592	0	1.48281539712216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90156214-1	3.76661433241465	-0.0376258711130266	0.946753874711408	-0.0397419774220579	0.968298834952959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73515138435419	1.716880652154
Merged-chr7-101947351-2	2.77104485024684	0	1.43499177854265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4934713-2	3.6881612004851	0	1.41852501333369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11374293-1	1.90400323545718	0	1.5305148151144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4720092-1	2.52075979093375	0	1.40203104947275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191244436-2	4.23424538624284	0	1.41927822338847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97293778-1	2.65076586078763	0	1.45872010679856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37360805-4	5.96395940449988	0	1.37335317782545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61909984-1	2.74875168277883	0	1.4032675091351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44777452-4	5.76783364363537	0	1.3902178620285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18591278-2	3.53243302693323	0.517476369142341	1.10364469068269	0.468879498547888	0.639155771223084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	1.2636608194585
Merged-chr3-109246265-1	2.25794200666222	-1.91594917844921	1.36325388243656	-1.40542359947276	0.159895353217791	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr7-45800673-6	15.2085615569935	0.0462825105675325	0.458447700753156	0.100954831906666	0.919586315834762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98522513791773	4.0369204808975
Merged-chr11-67559179-2	7.03315916915514	1.28336862434643	0.705934356991575	1.81797161681669	0.0690684710215466	0.726186854124307	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	2.78364309532047
Merged-chr1-85664229-2	2.04646408914285	0	1.54415246139414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59283380-4	6.43349505649451	0	1.35909330438491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177623634-4	9.51262946938754	0	1.37345156246903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159696694-3	4.43845987256883	0	1.37955001892103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98341594-4	7.27022102055746	0	1.35540268471748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44484507-4	11.2619853329043	1.29599727881773	0.711327440654512	1.82194191415595	0.0684637996521711	0.722785722527164	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94792243194202	3.02415088417069
Merged-chr4-137389156-4	5.55448330862618	0.322869939394177	1.09733569921207	0.294230780631678	0.768581561541743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.06702908365212
Merged-chr12-77092643-2	5.03205160944976	0	1.36292161723573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106782142-4	5.07717746714333	0	1.38247330753113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75782693-4	6.62999395680725	0	1.37805865800999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108335449-10	36.803654295177	-0.0494671744818553	0.341007199812416	-0.145061964993896	0.884661948123244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49951301957188	5.69036278238725
Merged-chr11-49100608-3	4.92739078716097	0	1.36754095295186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82351523-4	10.1724012488106	-0.0537660625083713	0.766479008799618	-0.0701468166656962	0.944076804137475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43049365066179	2.28842892375055
Merged-chr11-8787806-6	13.9856469521206	-0.179985334498634	0.563717366588417	-0.319282933552135	0.749511973022874	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5076325648591	2.9462120107287
Merged-chr1-43110724-3	5.54550132736117	0	1.38164194490643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-100934744-7	26.6316907390539	-0.219433314314467	0.397576222501534	-0.551927660396292	0.580997916457294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24160129279952	4.24352897821981
Merged-chr2-103638147-1	5.60629440150899	-0.859767456943354	0.827230244852527	-1.03933271576238	0.298650024495117	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80569462824968	1.99147532591159
Merged-chr2-166009702-4	10.4657700592974	-0.0819075361132617	0.729552847870468	-0.112270874347686	0.910608634675083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5473977117727	2.65063560637399
Merged-chr13-45897781-4	8.61262434392477	0	1.35266349978847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55795683-2	10.8533138635272	0	1.35142636201941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48161997-5	14.0912350522759	-0.586108804958625	0.542493502008383	-1.08039783479207	0.279965059619126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72792778423916	3.01127223887018
Merged-chr11-75737200-3	9.77123591128119	-2.48983334001439	1.16249691603598	-2.1417978023585	0.0322097563589144	0.442926927881161	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0
Merged-chr4-149144612-8	23.7822182017879	-0.174962382299356	0.399713472361352	-0.437719502587057	0.661589630161775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06566276774833	4.78670021361123
Merged-chr6-82863638-4	14.2434867529631	-1.01140842611438	0.752919355123937	-1.34331574720628	0.179169755207971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3069408311478	0.948471875794396
Merged-chr10-8059732-4	12.6134648434702	0.31415282364357	0.977257190141084	0.321463814042869	0.747858930389056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.32509503823899
Merged-chr10-75676442-3	5.08832024595454	0	1.36555486008254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155209196-1	6.95117708695993	-2.18784565222175	0.963351310481714	-2.27107767272122	0.0231422763426585	0.356068779991671	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39006831005986	0.723581231604105
Merged-chr15-35681898-4	6.02915916063185	0	1.3639052813809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38721622-2	3.18500993529065	0	1.43937328027438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33380219-6	18.3659574143302	0.800339689491372	0.578030275029047	1.38459821927347	0.166175356283944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25313295774157	2.83172365820806
Merged-chr11-76993037-6	12.8483067748935	-0.036619458750537	1.00254097954712	-0.0365266452919253	0.970862433011004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.02674429890598
Merged-chr15-58410650-5	15.9067141011943	0.0954958431595658	0.595956136177773	0.160239717929642	0.872692243223886	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56750606394817	3.73177058599856
Merged-chr12-91660841-3	5.69626283035976	0	1.38268164817779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24051916-3	7.90877426117098	-2.56181678831007	0.769892595026422	-3.32749893278575	0.000876293248064976	0.0324043705248735	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02881179861482	1.88879921758583
Merged-chr3-135522147-3	3.53582237770483	0	1.39376849667611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27503837-4	4.81984682346675	0	1.37157294808967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10745263-3	3.61429806896646	0	1.46963729418132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-23623-1	1.24875182673341	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85441818-1	3.23100467828055	-3.16060589840788	1.32218660114171	-2.39043860804419	0.0168282623261587	0.287264806584189	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35476919581267	0.41385117919798
Merged-chr17-49019117-7	26.4045082250985	-0.824225514536339	0.497356708793435	-1.65721201697646	0.0974766178428504	0.896220663984387	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4900134297183	2.44727450408462
Merged-chr6-50685242-4	8.1843065909493	0	1.35491629693987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142395137-4	7.00581795239017	0	1.38745525200915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101856391-6	12.8196348338561	-0.27983742366395	0.710301332629072	-0.393970010767366	0.693603180320564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07380828968664	2.06239089973625
Merged-chr11-103374748-3	10.8265506456043	-0.711537060754185	0.714066902183974	-0.996457136688381	0.319028083448931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05573020603771	2.12809743441046
Merged-chr17-8214558-2	5.99696425758345	0	1.40309033717061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4019378-4	7.2233550030903	0	1.3594659276059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124759502-4	5.1298959581184	0	1.38508615563968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145779566-6	21.1796982129162	2.09695423427431	0.519230211021338	4.03858286702838	5.37750961966569e-05	0.00351764194242368	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29398433573242	5.21993150412469
Merged-chr14-72933801-6	16.5769130250997	-0.610850730780873	0.468106995209005	-1.30493826632122	0.191913869715433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17146387481647	3.59330300346111
Merged-chr7-63753550-3	4.58790095758117	0	1.38361158967886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59568814-4	5.15226808321052	0	1.37166600941764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50369438-4	9.67202778756625	0	1.34507665787106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73600347-2	6.05605921005424	0	1.4059732258809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101696081-2	4.82383876913956	0	1.36272329653816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131110211-2	3.59146185253017	0	1.40271057543306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7045869-2	4.29809253586438	0	1.45508221498945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108894341-4	11.9301330736937	-0.0352429012567142	0.706036579300919	-0.0499165373154036	0.960188898859419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26292282237182	2.23869582718247
Merged-chr7-29008908-2	3.63724992663962	0	1.42221062013317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86943800-2	6.84095728335196	-2.27315921987796	0.768954985645064	-2.95616682681502	0.00311488559809364	0.0874597449518452	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72300235263283	1.28051966905443
Merged-chr13-97474732-2	5.91077628398586	0.800457409979372	0.83967529245662	0.953293990153611	0.340441135649519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	2.60474732639063
Merged-chr6-30546946-3	6.591354354514	0	1.35963954251523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131431348-2	3.06248442825894	0	1.4468390757359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4533769-2	2.93106044654881	0	1.4685422257338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128373579-6	15.7203622406231	-0.456540896454806	0.548984885193081	-0.831609227810047	0.405629551751254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2518483266862	2.93569299805321
Merged-chr3-96230597-4	4.69076948854653	0	1.36397456562343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10307791-2	4.48486348710263	0	1.37253232366024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120125316-4	10.0460562926117	-0.0359059080168829	1.14244317052404	-0.0314290539287068	0.974927370907204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr5-63943512-4	8.88183231291954	-3.13268500351224	0.808636311118584	-3.87403454487322	0.000107048228527061	0.00621028244877533	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07063111400479	0.953310774576147
Merged-chr3-132744901-4	7.69667107951705	0	1.36054928210624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85346409-4	6.54775656065484	0	1.36592119741842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8758039-5	15.5309068254574	0.597493264717581	0.568833477192904	1.05038344027519	0.293541856097469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67154369292436	2.65730764120186
Merged-chr10-117940726-3	13.3535737975245	0.542169016438329	0.670982842835797	0.808022175570008	0.419077816479998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4873962880981	2.91718979592903
Merged-chr15-73137569-3	5.90769185007559	0	1.37043017686171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111501820-2	6.21394536162431	-2.77020934940927	0.72556039202179	-3.81802725158415	0.000134523068802177	0.00752318878293986	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46105724887535	1.6745150554727
Merged-chr13-107955925-3	6.50067434029592	0	1.36020562440831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-105691048-3	7.0556306906539	0	1.36263804713485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55488763-6	20.3207300035898	1.68591152067544	0.661861531014012	2.54722693747214	0.0108582794733948	0.212242076193552	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34106889333198	3.50146245087892
Merged-chr1-171686700-4	6.73951914869737	0.663337452263413	1.03463878367211	0.641129505999295	0.52143854533685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.27743081564928
Merged-chr15-90322824-8	33.1927582636644	-0.0714380957821884	0.411677442109587	-0.173529293750256	0.862235404064637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99111279859926	4.68873018845623
Merged-chr1-171982292-3	14.2993067691144	2.45423912076482	0.771457635648579	3.18130122427461	0.001466150976293	0.048507912915588	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	3.70279134691057
Merged-chr4-105747924-4	7.21716896034543	0	1.36058496330798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57555114-4	12.4393047838184	-0.00670720273324571	0.462117161988058	-0.0145140741027468	0.98841985093634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62256825651194	3.70197236698981
Merged-chr3-60408905-3	7.83404736234885	0	1.35940322965988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37893219-1	3.75347808175037	0	1.38788092515166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49781805-4	8.16824720639663	0	1.37115850130953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19411365-2	3.15182455795136	0	1.41383168013458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94093094-1	3.86978543154154	0	1.39669613266182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132227844-4	5.78218344816447	0	1.36737174818129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99632449-2	6.35760278985422	0	1.35032422539566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33674720-6	20.8536280060285	1.67823243335602	0.75120416442883	2.23405634955717	0.0254793656192018	0.379877354825615	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	2.32831879379943
Merged-chr1-130918773-2	4.80664172099469	0	1.39282248137334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191071708-8	27.4145560735475	-0.442991338898957	0.323698298019691	-1.36853156661333	0.171145748139324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93887864462639	4.61945728671506
Merged-chr7-100500855-2	7.09115050177984	0	1.36379561501997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113780292-3	7.36117579135125	0	1.36663108273063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81081440-8	26.2563789519746	0.36717611300389	0.384848543458226	0.954079518411238	0.340043392730888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99384334859391	4.56756252122983
Merged-chr12-102498569-18	54.211845144688	-0.683126261680016	0.327442848973186	-2.0862457794458	0.0369563653428849	0.4831840182334	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48752451640077	4.68887961155261
Merged-chr12-54791621-7	30.2200144882343	0.131097313150603	0.387759086929349	0.33808959627164	0.735295670386091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.75418820657821	5.91315575333408
Merged-chr9-96438178-3	12.1671585681053	0	1.35097416947101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91885202-1	5.43969394618567	-1.9706497268301	0.833340851411935	-2.36475833806924	0.0180418393746448	0.299461479867578	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60006211724349	1.20027794713453
Merged-chr9-58954638-1	3.05834335043732	0	1.45446542768008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105890793-3	4.2110866135694	0	1.38394994884532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94902920-2	3.43495971973707	0	1.36914600685566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36812622-7	44.0524453431252	-0.113535910359329	0.37547951318661	-0.302375779162424	0.762365616526216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79772383981851	4.68543811869602
Merged-chr3-27453707-4	9.83936195217121	0	1.35137277202899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-86018742-4	12.7675323659823	-1.68636549805892	0.514198749785089	-3.27959859638659	0.00103954878455046	0.0369822201435723	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04967766143453	3.23281205169266
Merged-chr17-34364043-8	26.1122888019628	0.349194889352454	0.360228581054645	0.969370304627448	0.332360462982921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79996075206663	5.26104136041679
Merged-chr3-61426087-3	6.06238875888906	0	1.38608611778362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150840289-3	9.1282465329389	0	1.35539774405327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56745222-3	5.95868367135717	0	1.39378587334302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116620093-4	10.2241800924809	0.140749172860367	0.671346296312328	0.20965211789131	0.833939199282262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30483543417642	2.90686670578486
Merged-chr11-71849595-4	7.1594090916869	0	1.38048261738911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125990315-1	2.37272014031009	0	1.43772037497467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8827228-2	3.53681712830117	0	1.44572142296325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119977911-2	5.1404381045226	0	1.49744495497916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180607629-1	2.03805299211581	0	1.43859520726359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69573947-1	2.11336357169112	0	1.51995134394985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126630127-4	7.24413644472622	0	1.38039579508003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82074021-2	2.60713356393082	0	1.50538692450991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12027992-4	9.45051715920189	0	1.35188220365374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57468765-1	2.86765903280189	0	1.46487847011842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29522986-4	7.59374687040404	0	1.35295342744339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71931253-1	3.07373951724914	0	1.44006479048443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32158413-1	2.07012142526401	0	1.43906736912275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55776952-2	4.77279941885615	0	1.42171899751259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64789822-1	2.96722634243034	0	1.46511130391112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32361460-1	5.93758537760913	0.121428437179019	0.714517856516767	0.169944580211019	0.865053721084841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67868644106817	3.06740843900528
Merged-chr14-26487174-2	3.03814027211753	0	1.39675893279808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146692719-1	2.56629099546654	0	1.48119666071542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142270951-1	2.60464996355283	0	1.51713861017771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106164145-1	2.47085346762448	0	1.47481217549954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11261198-2	4.12415128950616	-1.00954583374882	1.13406030957174	-0.890204714183197	0.373355973824151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.724326877898254
Merged-chr12-80872578-2	3.63957527550892	0	1.40297899711329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108135881-6	15.6442937305635	0.225394080591379	0.63008607201347	0.357719509449116	0.720553231527804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58328144429995	2.32141208096419
Merged-chr16-43967048-3	15.2403428947414	-0.474278753378421	0.536087655871104	-0.884703738622282	0.376316438759507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87022410157085	3.3915371852322
Merged-chr5-77354688-4	7.09724003178826	0	1.35456107931201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28236935-4	8.95821441111792	0	1.37231261301714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36850183-3	9.27842163109419	0.430468955640184	0.549111001465646	0.783937955151525	0.433076517357511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45382264509587	3.33941719150921
Merged-chr2-169703086-3	7.91233204034989	-1.13838727825104	1.262563752546	-0.90164736311766	0.367244222608055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr1-36059039-4	7.76059186868465	0	1.3763631408321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46369396-4	6.86743325068653	0	1.37503551247967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129827901-3	8.22965522580951	-1.86939230182012	1.29147364787751	-1.44748776321716	0.147760361216094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr7-98086515-2	7.33227454559729	0.774404789463106	0.824589638261377	0.939139607788325	0.347659070947044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65880184244346	2.23050803533398
Merged-chr14-17713219-4	7.23142993182444	0	1.3781047562421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54565635-3	11.0072270863251	-1.06078652032596	0.507732445733074	-2.0892628179284	0.0366840714668347	0.480855905682582	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42178592422055	3.63633802056148
Merged-chr11-30676311-7	20.2775366889047	0.636488115346186	0.576763910014631	1.10355052439054	0.269788163190906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41963131209394	2.9835911359522
Merged-chr5-142424934-1	3.06281762745202	0	1.39998545924364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20812106-4	7.5005142078634	0	1.3740170446224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97957725-1	3.77428172172925	0	1.37818276420921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99001517-4	7.20692460856975	0	1.36603581659445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74627974-3	7.40028449964243	0	1.36094774609126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115487840-3	11.6681007021414	1.34422086299966	0.591066035552131	2.27423127391171	0.0229520848330945	0.354144870690373	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70640964490296	4.52107642130087
Merged-chr4-3768259-2	8.9110459829465	0.721465903221954	0.723568426797702	0.997094229795165	0.318718773583467	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36907416230548	3.71509598433776
Merged-chr3-65517690-2	10.6075770370512	-0.0341204493214201	0.988409669800537	-0.0345205539402561	0.97246205244074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	1.17858215524007
Merged-chr11-35091083-3	10.7757253356486	-0.884314145526599	0.563232512480301	-1.57006942236405	0.116398961387491	0.998201806407979	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28939683379139	3.42002970380916
Merged-chr7-143154033-4	6.2220619733147	0	1.35980327518925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61757367-5	17.1916274307788	0.945384350470227	0.512892280063202	1.84324152891077	0.0652937539540776	0.702832311126674	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24402839470236	4.31138469140109
Merged-chr13-38503732-1	2.58366269764368	0	1.42614484616437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116421363-3	14.2736587297695	-0.843617566385628	0.553580525441147	-1.52392927065733	0.127526380604653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24716480221159	3.59543892248959
Merged-chr11-34771847-2	3.83924517426434	0	1.39145988878545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173412657-4	11.8995125959587	0.730588409719101	0.59927691195997	1.2191165638764	0.222799953938103	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55885937771851	3.06673918235626
Merged-chr15-6030564-2	3.74939093017406	0	1.38547302410257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125501429-5	14.5596962897974	-1.46365341531724	0.614415791172209	-2.38218717088117	0.017210147521513	0.291491092300668	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73115435885655	2.23659438538296
Merged-chr2-155979456-10	41.7551298664026	-0.51095096526216	0.288819529071751	-1.76910116467653	0.076876993592978	0.775460474062107	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43311967625911	4.90737903449259
Merged-chr1-131287496-4	7.89250190983396	0	1.39742099585416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134719877-4	7.08948353658927	0	1.36446829264105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113334255-3	8.790340226574	0	1.38733598015639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110885943-2	4.06443571555431	0	1.39883931915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108740616-5	21.7674779442594	-0.979276468983363	0.845311764293824	-1.15847964070564	0.246668355331742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	0.730937814817307
Merged-chr11-64615364-8	20.4544726024307	0.605406671473206	0.525598682820616	1.15184206365264	0.249385979304842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15734121391728	3.97048517089711
Merged-chr10-119610541-5	19.1821271807878	0.0083332868835899	0.525184866247736	0.0158673400913632	0.987340225552793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19304234463496	3.54626131098428
Merged-chr19-5094474-3	7.9612418096122	0.900664659389097	0.80603607642263	1.11739993498362	0.263823362940474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	2.22914634982628
Merged-chr13-99433424-8	27.4031830525756	-0.297426859863002	0.505568439461018	-0.588301872996831	0.556329688634859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40800258503165	2.72589463425718
Merged-chr2-152709245-7	20.7163096165296	0.486608812511936	0.371425938198128	1.31010993705121	0.190158647276272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51745436834911	5.01339023827838
Merged-chr5-122093211-1	2.22672194487792	-1.92957921554601	1.43904534986999	-1.34087450108527	0.179961202336837	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr7-132765810-2	3.162875136503	0	1.40578139948298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57628779-2	3.43243625115634	0	1.38760637304815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94123087-2	2.49679375159796	0	1.45770828472407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42906000-2	6.22712675617201	3.50746049175263	1.12006857978922	3.13146940735779	0.0017393390649469	0.0556496363928478	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.47451908504411
Merged-chr9-69443370-2	2.17149399031326	0	1.56598406312862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45521511-2	5.82191640910435	0	1.39178734814207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97682008-3	6.60739819120336	0	1.3626406104574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-25857290-4	6.07189629108689	0	1.38356941941855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28959700-3	5.97007625111689	0	1.36277923516999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67055836-1	2.53341861312899	0	1.48326259837642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103005277-3	8.19086221938546	0	1.38200003226862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66807431-4	18.8931717564359	0	1.35655551982236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-7313396-1	2.68291416691243	0	1.45766046180936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66202723-2	4.52686413812819	-0.237901231434705	0.990805371751352	-0.240108943913162	0.810245800766978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	1.44327150962309
Merged-chr13-6228486-3	5.55818906020207	0	1.39056961041624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80789709-2	3.08702553507053	0	1.39617934812919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164085888-3	5.6944755465798	0	1.40414840364028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19916074-1	3.64917988829104	0	1.4129153313432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25904870-1	3.02907967023249	0	1.50520366811594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54937929-1	3.77210738231806	0	1.41405591215705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87488919-3	5.59015798157414	0	1.36327383773216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136834012-4	10.5967784899614	0	1.36676337936442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37673997-4	8.06219284738936	0	1.36010874571225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37139381-3	5.70804050723984	0	1.39700964896514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136505503-6	16.340059799452	-0.878248253120216	0.643283488807142	-1.36525850329032	0.172171816485888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74558678148638	2.66315906007699
Merged-chr11-87039431-4	8.8180857233566	0	1.37117121716234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66471328-6	13.3504908064222	0	1.34785922196729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86884151-4	16.0140804870949	-2.53175588249782	0.607286543985389	-4.1689642353721	3.05986994035968e-05	0.00220306582898029	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45031534442553	1.41478649953382
Merged-chr9-116123745-2	4.33526695242278	0	1.37816755528632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108706204-1	6.64092651406169	1.91222231256761	0.883696065296601	2.16389139621867	0.0304726854112204	0.427695508977157	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	3.24037419430325
Merged-chr2-128743543-6	13.0953605529175	0.0538661533413615	0.69354715897766	0.0776676144427788	0.938092456192171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45984447747155	2.79053920549463
Merged-chr16-84702948-3	8.61086016810576	0	1.36961672424118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116100572-3	6.40209797999107	0	1.35320495644563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152333900-4	24.7595618157063	-2.23138013462115	0.620664556825715	-3.59514670216255	0.000324208831789063	0.0154936707739016	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12823727251439	1.97731223551783
Merged-chr12-91637666-4	7.82718954380159	0	1.40939229135122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26449659-6	15.7596353875706	-0.307282086132821	0.507421277033299	-0.605575879532257	0.544796423353562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33681377576098	3.33804844381523
Merged-chr12-34828387-3	10.9201918970396	3.0617264067846	0.927702005793413	3.30033393014611	0.000965698483033497	0.0348568418587104	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.37585145015565
Merged-chr14-103392562-2	2.74049271764065	0	1.46501791879431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86446285-1	4.8114070068076	0	1.38700582809034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119818008-3	6.73251345966399	0	1.35436003499718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132586071-1	2.40671350344915	0	1.41171795796399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-153878193-3	5.86974318424515	0	1.38690229381637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155405886-2	2.9984372374066	0	1.44159162691724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76364754-4	6.66308297481429	0	1.36234442582607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104067423-6	24.1842360474723	0.568177472960163	0.557199966029042	1.01970119813422	0.307870193280133	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75816278648396	4.41987455073619
Merged-chr13-30625324-4	6.40033895189588	0	1.36428667741167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102646229-4	7.80536698050291	0	1.35009290165368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24587957-4	5.35698308932342	0	1.41692763000148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27308630-4	13.135540013746	0	1.35449677936681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60947745-2	4.53043695406909	2.0662762730516	1.23822781791067	1.66873675680954	0.0951695612115885	0.882097102908603	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr9-124016797-4	7.93648797431486	0	1.35824636085151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-81694623-2	5.58793937405759	0	1.39096183403175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135611090-2	3.11215950222146	0	1.41902468734959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51094892-2	4.76399328702734	0	1.4370267942084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158176564-4	9.30869945692689	0	1.35410203319218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67542701-3	3.89439324387696	0	1.38480147401537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50245431-3	6.24497312634551	0	1.36160511829977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170343902-4	10.9677025033093	0	1.34945086799786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20494203-6	14.8253425032026	1.00822929746718	0.67294772048377	1.49822826763182	0.13407395371122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85545068682378	3.04250812344398
Merged-chr11-82561747-4	6.70745236523526	0	1.35968138537166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86812873-3	3.72046937106681	0	1.38815666353999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45464439-4	12.21329440708	0	1.34371299641795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3777085-2	9.13159028080964	-0.305516332580599	0.689075951404874	-0.443371056496339	0.65749736748544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68683437875822	3.03045273817294
Merged-chr13-95494579-2	5.44891497872914	1.12264527011775	1.14674452945471	0.978984631085683	0.327587573385983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.96407541330571
Merged-chr11-118103049-4	8.09946960945283	0	1.34955030443995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70871235-1	7.62117149117696	0.154489377777449	0.704642919477654	0.219244916122864	0.826459268494594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49164944546238	2.28144814127203
Merged-chr11-116379745-4	5.76104494726889	0	1.36998513491849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97164462-3	6.79503134063845	0	1.36245041793475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32202443-3	6.48016656835327	0	1.38417508635098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82744472-3	7.21548968785045	0.330554074836041	1.06901082792134	0.309214898673003	0.757158061385158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	1.02674429890598
Merged-chr4-42902270-5	11.4375858380858	2.52152809355116	1.1197770145743	2.25181269193113	0.0243341112892088	0.367757178418315	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.97731223551783
Merged-chr3-9516336-3	10.1404915581573	-1.73252572598614	0.904898839111393	-1.91460708214354	0.0555426312699082	0.634694532941127	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1926321744293	1.15786140276852
Merged-chr6-54705478-6	13.6773388274487	-0.478938648265794	0.522685852352984	-0.916303064469312	0.35950796116605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36793544212227	2.75733422342683
Merged-chr9-10668815-4	7.5221956841467	0	1.40109975795639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79821687-4	5.6780797865668	0	1.37814798248811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27325915-4	6.03742134503834	0	1.35556712743138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16747458-8	35.6842223594686	0.0544278469519634	0.354505841690769	0.153531593985523	0.877979077255001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62673526289301	4.55923493936186
Merged-chr19-6668750-4	8.23376647219133	0	1.35972190148356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117831614-4	14.528556309785	-0.415333199953752	0.421297251641955	-0.985843601720735	0.324209865942386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84631708671047	3.72860595893592
Merged-chr14-64657825-3	5.22785754528048	0	1.37689433201705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117362625-4	7.89175651260952	0	1.39327119954532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104660042-5	15.1492347223064	-0.640128181708805	0.527822343767814	-1.21277204208391	0.225216987304889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39840673315793	3.86637316456241
Merged-chr10-66930162-3	5.08111227241521	0	1.39813652139761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97520641-1	3.10921169280841	0	1.43728005555461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8840200-1	5.17716086660145	-0.369617497033394	0.893316195377183	-0.413758867180652	0.679050710570653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87714804785473	1.67993433463714
Merged-chr11-119676959-2	4.00173342238024	0	1.41274392721546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53377048-2	3.0516488094246	0	1.50745236075165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87802642-4	7.89273548411637	0	1.35769378348701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-6119699-2	9.02638410659777	1.00264313795399	0.633021863508847	1.58389969723373	0.113216546310132	0.982023015936248	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96006934525357	3.9082630963248
Merged-chr1-14823902-1	3.45279554349154	0	1.38853201245586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117320619-4	6.03790364865321	0	1.38672183544567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3260411-1	1.26916848137228	0	1.59327065276205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89041471-2	2.75670354393714	0	1.40984881679835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47435471-1	4.63782532350587	-1.45875948323916	0.833099870190546	-1.75100193318421	0.0799455770200581	0.793822645592747	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09316302394545	1.30064958020929
Merged-chr2-72962330-1	3.72572240666684	0	1.41426448231309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-127235979-4	9.00681684840806	0	1.34554781666498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69214565-4	7.75155545374649	0	1.35094223218582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-112180176-1	3.16292487696897	0	1.41423576922563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104285084-2	4.04573187547672	0	1.36674866354305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127153578-1	1.71929465028274	0	2.45185165621184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-49558553-1	2.15380652595723	2.22048857549407	1.51900378159049	1.46180582458398	0.143794427545509	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11812572528152	2.22602273017346
Merged-chr12-26452253-2	3.09483700760879	0	1.55554216951092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129261452-4	19.1515942891888	0.453791444043096	0.68399302718151	0.663444546961258	0.507045883554844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85111348754977	2.1596069534694
Merged-chr10-78155599-2	3.53709884089001	0	1.39644385259843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59528753-1	1.85489545242798	0	1.45848954453391	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46604508-4	6.31924664853741	0	1.38036744687451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40626253-4	6.01213145071846	0	1.35831878299068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35062293-8	22.167744125958	0.36250744253308	0.391301487389028	0.926414680792353	0.354230517578213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89584367519795	5.25476727096993
Merged-chr1-161170869-3	7.95977684862284	-0.290956619727283	0.987849321062052	-0.294535425113692	0.768348797928722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.44059547810395
Merged-chr8-108393068-4	5.62346701404078	0	1.35410933595546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93195812-6	12.7887663199122	-0.294943832377952	0.614795579285706	-0.479742929707838	0.631410198010647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44827087945037	2.23551309600001
Merged-chr6-108549758-4	7.48634121535494	0	1.36721768460933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97962072-3	14.6392020540834	-0.954268340430046	1.00570384230821	-0.948856214211019	0.342693746634379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.577068348605183
Merged-chrX-85773289-3	5.17696426844849	0	1.38706778429421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83673268-5	12.1745656280722	1.45699968907044	0.934277032725787	1.55949428064135	0.11887943720144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.99358654727727
Merged-chr12-112870953-3	4.24770236411955	0	1.3776514286725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61917827-3	4.04247567781225	0	1.42846427596367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62847894-2	4.5309929295515	0	1.37330559611088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104281934-4	5.41515539540559	0	1.35299026257833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102354572-9	33.141756462245	0.484633582404975	0.368112682639661	1.31653595559318	0.187994218547684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77966596354395	5.20950901422168
Merged-chr18-50081263-6	18.1861075256371	-0.322317930985593	0.690390472002001	-0.466863237626864	0.640597728590395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67756367980613	1.97656658922368
Merged-chr5-36560722-2	3.64081000754327	0	1.40594841588381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79786728-4	5.14550237973908	0	1.37613430727299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80299708-4	6.01454910957805	0	1.38364511670275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129895533-3	10.9346948814074	-1.47887983276801	0.539200306531925	-2.7427281009538	0.00609311148183194	0.141787434520934	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99392441876194	2.87739529177345
Merged-chr15-78864072-8	25.2755437249856	-0.53348320499773	0.415450852964749	-1.28410665471181	0.199104639920149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68484063052614	4.20004302737431
Merged-chr14-60443987-5	13.522400487398	-0.493904662858547	0.548689763647209	-0.900152865210208	0.368038905934299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31406156957738	3.54669228218878
Merged-chr17-26437261-4	17.9936244438182	2.02426981788734	0.56635432108206	3.57421095334776	0.000351285633674433	0.0164758720974189	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50206981432288	5.43203733680337
Merged-chr4-102624621-3	18.5981176573468	0.946909939363425	0.514918356082535	1.838951608887	0.0659223039425448	0.706659538555077	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05231067795763	3.35956818584714
Merged-chr10-43842037-2	4.68716378538232	0	1.40705391475833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81225216-3	7.90882002064952	0	1.37655133053926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153401969-4	5.71305789242826	0	1.36232462291818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28702839-4	11.6883540501709	0	1.34457341856759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52909359-4	5.41863635091077	0	1.4000043086823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53558566-2	4.09672224262546	0	1.39283274473291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130629513-2	4.23055230480915	0	1.38793114841039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135705302-2	5.01162925709533	0	1.36385643639093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38132713-5	12.5589166857682	0	1.35098354236155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123136609-8	20.621344292845	0.0843650640998917	0.403518447053207	0.209073624058549	0.834390764637612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11266457038763	4.0510138593161
Merged-chr10-44342057-4	7.68999350049772	0	1.36377515612928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145360090-3	11.8816424734538	-1.41066824852856	0.596463975619187	-2.36505188274639	0.0180275452237838	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02258854975248	2.40373656850996
Merged-chr11-32238623-3	5.10065640744237	0	1.38475355214626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137826832-3	3.2297893657988	0	1.47551785068915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118662803-3	6.31937682133781	0	1.36613006469688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97175922-3	5.93119582816925	0	1.36686431526283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39803658-3	3.06315134384279	0	1.44960718841997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25663519-1	3.78194838309771	0	1.42814702560284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-8624723-1	3.23054205577901	0	1.42461550537714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150340976-7	24.55992505453	-0.366204638009017	0.47362306438008	-0.773198489580186	0.439404919913898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92079943088501	3.86512902328546
Merged-chr3-96576383-4	7.60689323523186	0	1.38140369948868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32538996-7	43.7344383962808	-0.0410533991716236	0.415103794397638	-0.0988991180656313	0.921218369156101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69701322433741	3.81497255181807
Merged-chr2-94165054-1	4.66232451059264	0	1.37754932870421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93960180-6	17.0071313397745	-0.287176684149621	0.504973970298841	-0.568696014132514	0.569562453231541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43460899032854	4.21209080228107
Merged-chr4-41310780-2	3.9128598023751	0	1.39117479658355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56134572-2	3.99686023231651	0	1.38142719761692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95850718-3	6.41704105414473	0	1.36215961184902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55353215-5	12.9879514454242	-0.0577099490658945	0.976054633676259	-0.0591257364851935	0.952851959745531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	1.06633037676026
Merged-chr14-54765262-5	20.2441394407588	-2.24323173359221	0.538819454027319	-4.16323448759234	3.13770843151436e-05	0.00225313992904477	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12602822148203	2.15929265190936
Merged-chr2-164007112-4	6.98847884844954	0	1.36205993849441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9815943-3	4.56224832411494	0	1.38555988521965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139212380-5	13.4920088085048	0.393508931198318	0.615646119707091	0.639180396987703	0.522705583122718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22547822118247	3.72991578504332
Merged-chr6-87547584-3	5.43699227997716	-0.524790064219097	1.22365428955693	-0.428871184204417	0.668016971647845	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0.55634759613363
Merged-chr18-69416294-7	37.5465309476906	0.415078285061189	0.36108652008295	1.14952583930808	0.250339218289353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98319497996751	4.48781356459115
Merged-chr10-117893335-4	5.63912975321533	0	1.35531933409913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11299525-4	7.62327096756465	0	1.35073377322148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53390382-2	3.04570036057198	0	1.44198795080954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138013013-2	5.8721548907641	-2.97534436361113	1.03251222285651	-2.88165534290688	0.00395592182122912	0.104236526553657	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90602146511858	0.879366456215217
Merged-chr11-60838012-4	9.620445634246	0	1.35205278851713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49178363-1	3.63615526776455	0	1.45740413428492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47354255-1	2.68634106112308	1.26063265025932	1.47178717416517	0.856531890199664	0.391703641153795	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr10-127731542-1	3.48972795989276	0	1.40646252608293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116978392-4	10.3078443216251	0	1.35703712563246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78271708-1	2.48192435840288	0	1.4141390414357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10599223-2	4.75225565869098	0	1.41976514592746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113032661-2	3.71421702980637	0	1.41806721691758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83297573-1	4.65822274673083	-1.34403369422318	1.09452110761083	-1.22796507520718	0.219460078761514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2114987131338	1.04567094108452
Merged-chr7-114163118-6	27.6716010670127	2.1799229110283	0.588562146830559	3.70381092764343	0.000212384579927175	0.0109535231311777	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	4.1796084843375
Merged-chr13-28844153-3	8.01936767513445	0	1.3538089562342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96554748-3	4.6015269968014	0	1.41573677898192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153234970-3	6.095969631377	0	1.38947748503646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142222377-2	4.1034474722852	0	1.50192109626569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77622162-4	6.11069132492569	0	1.37125898794485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84638664-5	18.0124626121825	-0.230965929054463	0.460805217781881	-0.501222469151356	0.616214562678856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90619649056056	3.79650980244697
Merged-chr3-35751057-3	5.32061035944763	0	1.40363432196074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120159066-3	5.49661743472029	0	1.35828470361486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90403813-4	6.4253405185358	0	1.35960533183434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-142468486-2	3.91759763379696	0	1.40084509295103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144971191-2	5.61621566050796	0.0667080731032026	1.08368184669353	0.0615568797306505	0.950915716772946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.948471875794396
Merged-chr7-80049127-2	8.20802228981708	1.14721125832331	0.818827514393141	1.40104141367739	0.161201689292326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32852444445417	2.55328591017349
Merged-chr11-75092307-3	12.0700094176604	0	1.36405504287448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11466270-1	5.19516814415308	0	1.37668485815802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33426130-3	4.70169393959166	0	1.38291045272459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83713990-4	8.1299584950546	0	1.35608671140897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35874584-4	7.81507469392058	0	1.35393733771449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94638802-3	4.99897843597415	0	1.35504772592449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143917763-3	7.65570457511678	0	1.35209333022514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150233559-4	10.8483376039314	0	1.3583654269564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75553899-4	8.94508511359927	-1.83976659880724	0.926162285850199	-1.9864408505021	0.0469843944993362	0.565585335203497	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38327122822273	0.904676873936758
Merged-chr2-18772576-4	9.16728934986541	0	1.3758007593055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94205953-3	6.21004254955934	0	1.3559465920213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14673459-3	8.48765371926771	-1.46416914412623	0.874991851371133	-1.67335174816981	0.0942580708080018	0.876908175774803	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68200738535058	1.41659105503593
Merged-chr7-75576382-3	7.54878268448126	0	1.36057943081186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78096284-4	8.05125348497679	0	1.36675842184637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58990309-1	2.74879830514128	0	1.38268976742617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41775955-7	19.4528268976799	0.69594326645254	0.421674028721712	1.65042952387242	0.0988551167402604	0.904505182777953	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31481369666056	4.97392985635239
Merged-chr1-89891597-3	7.44780587978366	0	1.37005278012108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35736734-5	12.1145665016471	1.3703476911642	0.533057523910863	2.57073135580269	0.010148401619316	0.203563455211956	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88309829444661	3.97420126217679
Merged-chr6-131264362-3	10.6789453579381	1.19276398726842	0.838321693513707	1.422799858929	0.154794182284211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62581156516825	2.45069810784924
Merged-chr9-47642811-8	19.4783248091151	-0.402960669058679	0.375704514919057	-1.07254678359533	0.28347451257459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64982200880416	4.22223313315736
Merged-chr6-88136306-4	6.53096752830911	0	1.35830605713843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30781226-2	6.44354772256796	-1.07695055495327	0.854955688965018	-1.25965657501735	0.207793276975347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48751711656498	1.58059388295115
Merged-chr7-90133463-2	5.14072727594264	0.777173522110913	0.711654205805903	1.09206622509989	0.27480399355858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	2.94368145674708
Merged-chr13-65242089-7	21.6509827762986	1.08850065253503	0.400013467848238	2.72116001091243	0.00650532643611581	0.14814538740713	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0781069183038	5.26088341929784
Merged-chr1-57852729-6	26.3744088128115	0.0957071585404332	0.568580380534466	0.168326523068679	0.866326409160488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4314922584484	2.84992482425315
Merged-chr2-49748757-4	7.01983228599917	0	1.35293605456755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87748826-9	33.6570470295555	-0.465345996898219	0.338559972050361	-1.37448616290942	0.169290803087428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3449613868913	4.87268603015134
Merged-chr2-52471708-4	10.4457976414063	0	1.35461801139697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99190092-4	13.2166336049406	-1.520381145543	0.518887215733965	-2.93008017819907	0.00338874554221171	0.0935052606305606	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74487135735738	2.66575758505921
Merged-chr18-75262397-3	9.26034528942093	-4.43538323660334	1.05415939600633	-4.2075071885777	2.58203192192036e-05	0.00192533159456336	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25210242546693	0
Merged-chr18-69576533-3	8.42116122131109	0	1.34619725191758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84171516-3	3.39496788933773	0	1.40333802675511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44029802-6	18.4014563540793	-1.47756413773409	0.523027140933053	-2.82502383164705	0.00472770995488057	0.118430223703849	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36254032657847	2.57779486076395
Merged-chr4-46643559-7	25.9328407720158	-0.235617198596753	0.45841677055846	-0.513980320374657	0.607265749754899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71478491783677	3.47452421409482
Merged-chr2-24409389-4	4.47942812553535	0	1.364369621654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145253254-3	12.3986768936924	-0.766571450446152	0.532033832819176	-1.44083214855753	0.14963210868547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49496044058869	3.58296652200178
Merged-chr9-90276432-6	20.4195909559139	-0.238198299485981	0.388552844463122	-0.613039649253138	0.539850123349469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39167979367765	4.86973208690609
Merged-chr5-67814642-3	6.01197993363265	0	1.37789436623488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60360925-1	2.02451887761638	0	1.47677115062961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23023358-1	1.98189081658488	0	1.4779375159509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104115124-2	5.01405969830616	0	1.44383951445685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94794312-3	4.90862185382896	0	1.40813944241848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5844886-1	2.93227243443195	0	1.47401767352906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86135529-2	14.1196510388972	0.395365635412172	0.577362470702798	0.684778896229453	0.493483454374132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31814660474496	4.5808859215524
Merged-chr13-38296807-2	4.77248281181289	2.72134188596384	1.15932672414649	2.34734680852572	0.0189076464886311	0.30892718830042	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14046671619316
Merged-chr10-82914367-2	5.41809496886765	-0.505745227324542	0.800166957153726	-0.63204962764712	0.52735444900336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54911206455162	1.9134233865196
Merged-chr1-54816824-3	6.81651763341367	-1.91589813410537	0.999020281657513	-1.91777701542418	0.0551392913816707	0.631146923608389	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56605965819909	0.577068348605183
Merged-chr3-126630930-1	4.16540844448761	1.55862270431209	0.986647695604371	1.57971554715622	0.114172023547603	0.987066093297792	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69442907999601	3.78746273026249
Merged-chr15-83474197-1	2.1035277394405	0	1.57682643956047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31009171-1	1.98185965043977	0	1.52753716443316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52482016-2	2.13278701806551	0	1.76867378954059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13363850-2	4.05080141119783	1.21167583460244	1.38329275971064	0.875935933370964	0.381064863542291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr3-129943987-1	2.54465351234494	0	1.48557628786795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116216909-3	6.83712175399321	0.241445285036431	0.801598378975413	0.301204807007022	0.763258324481618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80505237968249	2.49521342937108
Merged-chr10-22390644-1	1.37116511057616	0	1.82680712273487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11169573-1	1.81020357954769	0	1.50483625133379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41278697-1	2.23352580445041	0	1.41997486600387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22895985-3	11.9680896227196	1.38457783085029	0.507624838940609	2.72756123151862	0.00638044145213041	0.145974081185335	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83579073803687	5.13901027215001
Merged-chr3-75744265-1	2.46310679320749	0	1.42030045202131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95837310-1	3.27619177629533	0	1.43099411866904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34854647-1	2.79343915721421	0	1.45965963152947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123274944-1	2.62756009221043	1.0576427469338	1.38737518003903	0.76233362262113	0.445860911568988	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.841757702988201
Merged-chr18-55237918-1	4.56954378140577	0.547699300750479	0.883779380103364	0.619724009273018	0.535439505923858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.67285245412069
Merged-chr8-56862317-1	2.23457218953163	0	1.47592634575907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65005131-1	4.20914686438286	-0.823484959985304	1.3394156732422	-0.614809111492604	0.53868079131558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	0.724326877898254
Merged-chr18-69628507-1	1.636620853302	0	1.53865115077234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3513012-3	3.76470940581781	0	1.41724613008288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129393412-1	1.83928599237685	0	1.51043746471135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124957531-5	12.2655789108633	-0.032185853795869	0.871677075496451	-0.0369240567414693	0.970545558317875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72942046393685	1.71273550799308
Merged-chr7-100150710-4	10.9250487433612	0	1.35471562717698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29522410-4	5.01406798423301	0	1.35254750227029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115469468-4	5.73371605125499	0	1.35897486091192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170164381-6	12.8382958840761	0.822332317268737	0.834263916246904	0.985698052204099	0.32428130558507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	2.00487246391424
Merged-chr2-159735479-3	12.6181947427404	1.49838239523288	0.467173279743455	3.20733753449194	0.00133969707478186	0.0454585476205164	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90357375672364	5.3506075585126
Merged-chr14-54387920-3	14.0400081668383	-1.88111845198329	0.575009180230728	-3.27145812042249	0.00106994434095002	0.0378406665124932	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93272462782738	3.24418104742061
Merged-chr5-117483105-4	7.51609101341931	0	1.364582093004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50670554-4	9.305402260979	0	1.35804263584899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79646775-3	8.9904875218866	0	1.37568393335715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16225636-4	8.26047936393925	0	1.35027342937369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108786740-3	5.66644382604654	0	1.36488953066679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24507931-3	8.62665552886955	0	1.35669261005791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81845382-3	11.2485310340035	0.21834765843879	0.611964864908735	0.356797703527233	0.721243255586763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44295655026151	3.45157736083489
Merged-chr5-104005212-2	3.53496976577427	0	1.42689091432108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82399203-4	7.92131405924166	2.43022948880707	1.11867913004909	2.17240978536931	0.0298247675832229	0.421759766143707	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.5645819449897
Merged-chr11-53898371-4	7.4157063657676	0	1.35620891427408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29459769-5	13.4279517512641	0.986832864087268	0.749219982010713	1.31714701660634	0.187789349758577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71989966306259	2.2918226953127
Merged-chr4-53118977-6	18.0807452406234	-0.722929577632294	0.680389994106884	-1.06252235320017	0.287998615720725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04537585383933	2.06621232759638
Merged-chr5-139732936-6	11.9577543045982	0.682938871836271	0.722519407853712	0.945218722726055	0.344547222826595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84022605426951	2.40008246705937
Merged-chr18-39855575-4	11.367103933288	-2.8794647681334	1.13463710542807	-2.53778477220437	0.0111556567247654	0.216112025624206	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	0
Merged-chr10-24468853-2	5.0317547926687	0	1.36670742086147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24405870-2	3.66009628689236	0	1.39868723460376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151653631-4	6.9467496759314	0	1.40117718092977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104377318-3	5.41849533347444	1.25700272707808	1.44646377072958	0.869017774599403	0.384837408774428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr10-126928374-3	4.23410819577147	0	1.39254132939975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78810261-5	23.2908139577155	-0.7287791348221	0.382598672583879	-1.9048135475753	0.0568043122113334	0.644102129223169	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37729462013362	4.60067458529679
Merged-chr18-3008717-1	3.73154571684206	0	1.41027901846377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30508214-6	17.5521288023181	2.41354744344161	0.474228227422745	5.08942172539653	3.59157070518531e-07	5.20624511901782e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17804145048245	5.46023857416649
Merged-chr17-31139662-3	6.50555716161145	0.917368189162815	0.931096571587651	0.985255683627502	0.324498494974839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	1.45526469271556
Merged-chr9-121305644-4	7.18654178965675	-2.11474573367054	1.13907130333464	-1.85655255073112	0.0633748399558425	0.689688273305234	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.303163067301871
Merged-chr1-191110567-1	5.97015746686447	-0.542676508429877	0.695133857166531	-0.780679149540934	0.434991226813977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11460332868229	2.06070990168116
Merged-chr13-112102218-1	3.18598453233671	0	1.43813911516403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73402352-2	5.95710593539114	0	1.36932171380649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104200026-4	4.85519195664192	0	1.37720240788632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98948283-4	11.2888946585432	0	1.34391529671315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113302441-3	5.03224702267039	0	1.38713656007234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68362102-6	13.6845837224226	-0.667178379332655	0.550766845913059	-1.21136263789918	0.225756452029858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35822082392563	2.35532669962609
Merged-chr9-20979979-3	5.77032031926764	0	1.35227926467358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-85195256-2	5.73731327703906	0	1.37201471394799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72868928-1	3.04207640902211	0	1.38335037457808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8164930-4	5.25867556189257	0	1.40035614815174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58399005-9	80.0841359080805	0.285074732198685	0.336248367104435	0.847810012145407	0.396543786267296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08136257259904	5.32426167402871
Merged-chr4-149398449-1	3.63900561646507	0	1.48230333682376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17435598-4	7.52171484985693	0	1.35855141859147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44480328-6	16.515579349476	0.748086740502046	0.503922194032305	1.48452826519899	0.137668830309611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32400682845955	4.49543309185262
Merged-chr9-106234135-5	11.774487823995	-0.992458554621335	0.672877342181565	-1.47494720420165	0.140226738094617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0000504067923	2.74237610359616
Merged-chr11-55240812-3	5.09950040017382	0	1.39575629181628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111837025-3	5.4790601568484	0	1.39663562290237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35541685-3	6.32620250751198	0	1.35660274727199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75503626-3	22.1475219953326	-0.092719648965973	0.578389429012841	-0.160306610589722	0.872639551724009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61155606730869	3.24322022327577
Merged-chr1-165769301-2	6.56148223024406	0	1.36642283160028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45395611-4	8.59733073101044	-0.245371609845121	0.753737936316054	-0.325539684315734	0.744772653035977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86719832675847	2.1538399771309
Merged-chr2-58155849-8	23.1911705427248	0	1.34551936850969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70645520-7	27.4898869310771	1.45578298520269	0.45961512059351	3.16739576218209	0.00153810839897703	0.0504891512439568	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2040815619564	4.49639430927668
Merged-chr1-156860336-2	3.08527299572639	0	1.41517265869677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46308055-1	2.44797647200272	0	1.41644967751298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88087119-4	8.63521463927086	1.84861937114368	0.800475185325505	2.30940247122334	0.0209212580291047	0.33041464265216	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46316345736407	2.63854236508031
Merged-chr12-12173252-2	9.58031822195672	1.3034177976547	0.822482454732077	1.5847362945624	0.113026261908964	0.980842045196263	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91078234078169	2.4359863192691
Merged-chr2-73160966-2	4.20525698645912	0	1.39489853561151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159744879-2	2.26111203122469	0	1.70436190713351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19800960-2	4.36906413255392	0	1.41925912892769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40944101-1	3.34696803488335	0	1.4111099947952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97508731-2	5.50972538660883	0	1.40127794328643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183668042-2	4.60807393833428	0.0914378871379724	0.945229675205314	0.0967361579270257	0.922935924601448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.20253745507858
Merged-chr1-164757290-2	3.4867423752478	0	1.48290208071846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55795635-2	2.85184208693611	0	1.49073487488584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72467700-6	19.9854468938269	0.375967187314398	0.411864632053958	0.912841642749123	0.361325833331358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45063652555769	5.02478757305434
Merged-chr16-29607298-5	12.134067736524	-0.259147049112188	0.606352586151706	-0.427386730148045	0.669097671060924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57415274098327	2.96394375677944
Merged-chr7-98355459-2	4.31223509294418	0	1.37822709751227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75871303-3	7.23814498780804	-3.51229956270775	1.10680161364227	-3.17337770329903	0.00150676365737825	0.0496100337077071	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00110701584433	0
Merged-chr17-8158885-3	9.17104816558921	0	1.3903721467092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4257216-3	6.84566297755354	0	1.36685773655986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110231980-4	6.29845210743691	0	1.3675045929479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117482480-3	5.29329343811073	0	1.36736689703104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116649066-6	18.9001836659941	0.00432468954286542	0.403060937164902	0.0107296171474342	0.991439168395557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.224286145266	4.15597574382483
Merged-chr18-34858167-4	10.3223213975846	0	1.35909023894659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180261971-4	7.09586031708465	0	1.36167419062797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89940605-2	3.71458244263746	0	1.38481594226635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9650915-8	21.9528233529414	-0.175974016555086	0.40845086841269	-0.430832763898755	0.666589974596757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44737919460035	4.36937353767237
Merged-chr8-124586824-5	24.1043694555618	-1.86839167313993	0.393368331391293	-4.74972569990997	2.03692747199629e-06	0.000231642971653235	C57BL6J_F1_Control-BALBCJ_F1_Control	5.96682765521638	4.09750590348887
Merged-chr2-155397815-5	11.8955793490378	-0.456798249366116	0.749333968224298	-0.609605688166779	0.542123042710928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63769060835752	1.64587657336547
Merged-chr1-78713249-1	3.05181195968052	0	1.37984041587641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45795331-6	20.7171466032071	-0.406842561094245	0.458491116698182	-0.88735102224906	0.374889943750459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29193113863266	3.79306379092475
Merged-chr6-34629212-2	4.12482479819591	-2.28094057914284	1.23225465513845	-1.85103019869426	0.0641652087425029	0.695088996021067	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	0
Merged-chr14-78549046-2	4.28446817305171	0	1.39252885914618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-98034456-5	16.5836095296944	-0.284221050403787	0.469283140723326	-0.605649395300469	0.544747594312938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11995799417804	3.85072096808215
Merged-chr10-125274564-1	2.67839362398207	0	1.39254031379932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152573232-4	8.0794948600168	0	1.36172737015279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41024490-6	39.5006424007859	1.02029459860877	0.326393743976183	3.12596248377611	0.00177224159089669	0.0566023975555542	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43393923397304	6.48145599155736
Merged-chr13-58453192-4	8.7847670573595	0	1.35016409668251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88178621-1	1.94953536768779	0	1.6005787461365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146619747-10	37.4519743031889	-0.816833974604264	0.293161024758744	-2.78629799195331	0.00533138360845229	0.129494495787247	C57BL6J_F1_Control-BALBCJ_F1_Control	6.14208432215656	5.30608747772395
Merged-chr12-87325615-4	7.86209431170091	0	1.35516010821795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120197392-4	5.81519441565571	0	1.36033580904409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54879602-4	6.65651301392106	0	1.35401424529627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118676141-4	17.980567702373	0.978177847966154	0.539747766888427	1.81228697546118	0.0699418659848926	0.732133620849755	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57897570802206	5.41407959725349
Merged-chr4-55960225-4	6.68464273576339	0	1.35572113336915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129608916-2	5.98047251221368	-0.843241274836107	1.14136231750944	-0.738802448530223	0.460026964789917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46261730325446	0.577068348605183
Merged-chr4-103285173-2	2.23625899939836	0	1.41765776622478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31700413-2	4.02153945163829	0	1.37956224624545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41614341-2	9.35765768171761	0.599612029584808	0.540212884676085	1.10995506881392	0.267018388549831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91813342405864	3.52579579296094
Merged-chr19-53128665-4	6.94244892900731	0	1.37014540913618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5355556-3	5.66196268499607	0	1.362298306761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17251607-5	28.5883782784099	0.385409017445943	0.322040290099736	1.19677266880669	0.231395173915258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32653392094494	5.70165632166347
Merged-chr16-49876298-4	7.29449918532402	0	1.35178467139137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82073175-3	7.09964533312148	0	1.39493620895926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95778989-8	20.3710887920811	1.45306583986694	0.525574830722073	2.76471732459222	0.00569721425253458	0.135816817910921	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27516042523556	4.2204700556416
Merged-chr12-70968249-2	6.48759383446661	0	1.35887713530776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60175359-1	4.12156303732294	0	1.37741661133611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54383943-1	3.17038086419712	-1.1102008497486	1.32035739324944	-0.840833592044624	0.400441165431307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.41385117919798
Merged-chr5-98692225-1	1.25298945885644	0	1.81102965207731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5291723-3	5.70842626680233	0	1.40035865652442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111178089-2	7.33537176483386	0	1.4045932733988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21162195-1	2.40248185324578	-1.15694584262747	1.25173408606716	-0.924274456935569	0.355343438214796	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	1.03838943879457
Merged-chr11-22813157-1	2.82088686762863	0	1.43092199300272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17868343-1	1.94603797410144	0	1.61343602467116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-35348945-1	2.75454646114191	0	1.40715329637797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85766224-1	3.74725633009911	0	1.39223329361198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58062702-1	3.81052901053731	0.916930417969026	1.12303377448627	0.816476261712143	0.414227795022797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62635771927786	2.20225658013615
Merged-chr19-45958725-2	3.0870937811599	0	1.46814880836666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-53806460-2	7.40343536235286	0.273132125062368	0.858603669829061	0.318111993531015	0.750399986306091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27776313352191	3.33550292392009
Merged-chr13-104976018-1	1.37651801381898	0	1.61016128311022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79492704-1	1.71271451338256	0	1.62809634074476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134818916-1	1.71850277327501	0	1.7349031597115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47086811-1	5.3500203621465	0.220888341072037	0.718316461311586	0.307508393541077	0.758456435215627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24652561403637	2.80307167987918
Merged-chr6-82922839-1	3.79334291277112	-0.727218198797867	1.08039751867814	-0.673102433341028	0.500882125959892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90277810843129	1.56163052678955
Merged-chr11-101763866-1	2.65283818967599	0	1.41738953015664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45279232-1	2.0807559279661	0	1.49881084876403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-148821706-2	4.42733503794648	0	1.4600211245018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101569249-1	1.10359022508927	0	1.73908377166786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99207549-2	2.44473943856453	0	1.61886201960597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85186598-1	1.65195918320147	0	1.82972689060656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30608094-2	4.9940906937276	-1.96010087302649	0.962046572670585	-2.03742825836941	0.0416071444588672	0.521494758044631	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37475311282297	0.724326877898254
Merged-chr17-10354960-1	3.36970365931062	0	1.46154010198238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80949929-1	4.5129828107311	2.14864433746509	1.31852234504425	1.6295850772199	0.103189220428265	0.93007176807496	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.765562747387088
Merged-chr14-122297052-1	1.47045244930704	0	1.53725197591012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128412515-7	18.3822315553317	1.03824805048233	0.549066436671122	1.89093337552559	0.0586332384619767	0.656216637750585	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56846495047586	4.07782798546714
Merged-chr18-75917916-6	21.7937663340472	0.823123070928327	0.460369389909961	1.78796220810709	0.0737821052435238	0.756748310372159	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46879413699452	5.39846893227971
Merged-chr4-119142400-3	6.28279158663158	0	1.35735016441269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66953296-6	21.7766720152816	0.296316074193088	0.383819004431607	0.772020329300523	0.440102387045933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65521593721042	4.96081320046951
Merged-chr11-115412873-8	25.5181568631258	0.50382470874854	0.391740213977619	1.2861194505227	0.198401376898489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07617806220985	4.43900798128312
Merged-chr10-121630330-4	7.46443131258153	0	1.36061631701053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144335855-2	4.29409475587917	0	1.40804632626628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107342607-4	8.27836173085552	0	1.3647219580505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68392100-4	6.12862185053311	0	1.37350268921661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87652919-9	57.262504011152	-0.097392964211833	0.332085670294689	-0.293276623846514	0.769310719945045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3477438050967	4.30550200101199
Merged-chr8-80020593-2	2.8768233925135	0	1.44680907593857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55390302-2	6.5139713063617	0	1.36678945243311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-12206173-2	4.51902081468394	0	1.39171456004836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100734283-3	8.66484033695807	-1.2013008742776	1.25100777526835	-0.960266513147699	0.336921099042053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.303163067301871
Merged-chrX-77802663-3	7.55621246371912	0	1.36780140512801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19892343-4	6.49430392382201	0	1.38927293732449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134494397-3	5.68293778724393	0	1.35744066244961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10396269-3	6.66094410488056	0	1.36077841217408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11862961-7	16.6029415930877	-0.452316708969529	0.462248303249776	-0.978514590079782	0.327819878855454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89223731386341	3.39565516861005
Merged-chr4-45546051-7	23.9572936705048	0.323651084732869	0.424968258138582	0.761588844659843	0.446305434797982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58632816081078	4.82643326224079
Merged-chr13-58452382-4	7.50302282838563	0	1.36224382318378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84255216-2	9.71948408853129	-0.187229079971774	0.764002061423786	-0.245063579570527	0.806407202473258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67319737171176	2.04681445388413
Merged-chr9-37247140-2	5.73312639667526	0	1.38067680718703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104507270-4	9.32419882681713	-1.31973292864311	0.763897982841725	-1.72762981220825	0.0840546144083974	0.817667284292425	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88549609683835	1.39949824061849
Merged-chr14-36316879-1	3.6354721842009	0	1.38234130614535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45546182-4	17.9265394954982	0.648870987431329	0.791130895921077	0.820181579024137	0.412112601630468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.81620817287567
Merged-chr18-33719410-3	10.7017105468529	1.95134462542324	0.818986961992289	2.38263210036501	0.0171893634550796	0.291361586546515	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	3.01792726842815
Merged-chr5-24814180-4	6.87037561100787	0	1.37429003964112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40917894-2	5.40105014800071	0	1.3585973079119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117439274-4	5.68100736881993	0	1.3639483156346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4464896-2	5.05137694110867	0	1.38694465843853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94753156-4	9.20086206629674	0.0624706048449084	0.63027716270295	0.0991160850204418	0.921046100975376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22840787878693	3.39565516861005
Merged-chr15-4821370-4	7.30116573333256	0	1.37243578691401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148856801-1	5.39249279713398	0	1.37835233800073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5988622-3	4.96759264433466	0	1.36999360402708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46641298-1	2.81588697999792	0	1.39509725940746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107836433-2	5.88501174270654	-1.19534238204575	0.883769937801433	-1.35254926753836	0.176199669221545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34879464821968	1.36707655402198
Merged-chr1-180974594-2	5.1985617234921	0	1.37203613989535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107867243-4	5.18286685621595	0	1.36165724669959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99164060-5	13.246513572735	0.376595025837128	0.470285892614144	0.800778912894402	0.423259648817434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81823535195718	4.23718454563596
Merged-chr13-43752634-7	17.7476551688992	0.410598680918441	0.410086535577313	1.00124887138859	0.316706504630197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26893494447667	4.69934048339565
Merged-chr4-150371937-8	32.4679517404517	0.199230257981535	0.359623956615822	0.553996068160632	0.57958153658987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20210389574113	4.42109002743638
Merged-chr2-167804374-3	6.61347406540307	0	1.36825293474005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76239277-3	6.52402926768598	0	1.3672306435766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126820079-4	8.86763611157118	0	1.3513792326808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191131901-4	6.48420411502629	0	1.37430354743639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149780039-6	21.9899983577099	-0.829170306791113	0.421321324475437	-1.96802359297494	0.0490653231705645	0.58247257091695	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8866290655017	4.01250800558573
Merged-chr16-24819262-2	2.51911878522457	0	1.46518035740171	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88449152-2	2.57723039377698	0	1.54968513507614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73710990-2	5.26525437224544	0	1.37425516785769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24859594-2	4.56856546963336	0	1.40822782570762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116172655-2	3.66289844755116	0	1.42180665754022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76176617-1	1.85788841046187	0	1.60456358284821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60934845-2	3.75320109851752	0	1.42592823792073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-10324882-2	6.00808795950757	-1.79047264798215	0.792455354101198	-2.25939876450567	0.0238585911962053	0.363387267815781	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14228061785707	1.13341594473881
Merged-chr17-28810318-1	2.9129554336836	0	1.42156178208891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-56691373-1	4.13849403257597	0	1.39504470818962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159607129-1	2.1508917344119	0	1.44565353999331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141551934-3	8.87157222690926	-0.0357011065142869	1.38072308081778	-0.0258568188004373	0.979371542125403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.413263464506793
Merged-chr12-35050696-1	3.84407309439031	-0.344266093575286	0.956589809355102	-0.359888941120309	0.718930187410006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	1.40024388691264
Merged-chr19-53566424-2	4.58582950198291	0	1.49131405431238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108235532-1	3.44079743381285	0	1.5139042792573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91398760-2	6.00612760840668	0	1.35906288226649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-71798820-4	11.8488080574296	0	1.34902614957092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35023850-9	30.1349398810649	0.332610097973694	0.390049180652088	0.852738871076803	0.393804129730275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90530039834814	5.11005266738181
Merged-chr15-59819285-5	17.6864712844772	-0.323073891232005	0.500264292048928	-0.645806419460389	0.5184047301068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83967393430949	3.22343133542737
Merged-chr7-129995724-4	7.93409924889428	0	1.3576213941062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167497481-4	7.24912778370347	0	1.36317637946501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36572366-3	4.96016710577454	0	1.35620588317663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98515030-4	6.84186973407038	0	1.35589498046037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51475929-2	4.51813554031157	0	1.36911096535284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80176911-1	2.89392811749728	0	1.4768877384003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34149824-10	33.4294339102322	-0.491867265935826	0.409838936819145	-1.20014772084205	0.230081974873116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46842792077961	5.1123753453725
Merged-chr13-18779815-2	3.55483531719323	0	1.40511753117853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171932710-2	10.4993607822479	-1.13273749520267	0.74052531018317	-1.5296404857823	0.126105742369928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84490649468151	1.76271631669283
Merged-chr2-91101557-4	6.93000158958678	1.40173310835665	1.14810175013669	1.22091365873257	0.222118712383892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.40024388691264
Merged-chr4-19879879-1	2.54135659483186	0	1.40800374482126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115746627-3	7.0469246179614	-0.145087980454313	0.935228318621031	-0.155136427720924	0.876713764651919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67453645373796	1.97731223551783
Merged-chr2-119243442-1	4.03821313145482	0.619023093821026	0.872681021329423	0.709334887193971	0.478116683682734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87552666999187	2.79940718895477
Merged-chr6-97497588-1	6.2965350985392	-0.22538449182446	0.754768007225655	-0.298614262484335	0.76523438183205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12112164905459	2.34669163690884
Merged-chr2-84642304-3	8.37609212891488	0.0483086974924056	0.795700974526376	0.060712125583559	0.951588474677303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77530737790309	1.97524273517553
Merged-chr4-149706167-6	22.1273787573774	1.08431307542059	0.393985929185812	2.7521619304054	0.00592032385346251	0.13931726595254	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0134657775943	5.02782571726219
Merged-chr8-26723330-5	17.2521888783823	-0.48526887814216	0.870495190799283	-0.557463020211047	0.577211118202339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.39234354082305
Merged-chr6-54143569-8	19.1829102425196	0.527452431140729	0.40821007640792	1.29211026778685	0.196318960565732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15037898023027	4.81906568388793
Merged-chr2-102818879-2	11.7824712557042	1.48396898773132	0.707230029732322	2.09828333829798	0.0358801234826923	0.474908975234112	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10711476373801	3.51178927726847
Merged-chr7-125393807-8	18.396392830263	0.278111290887434	0.404746503766098	0.687124628130583	0.492004195679181	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47964546102193	4.61796467841348
Merged-chr8-123360781-3	5.95023123529655	0	1.37256346154349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100391796-5	13.3828534384183	0.348540843440985	0.512124218216961	0.680578717121568	0.496138097546857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09760506888322	3.57271498196077
Merged-chr13-109229384-1	3.37605774199299	0	1.38711021197505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117224533-1	6.92561817472439	0.59475504129135	0.766597455765989	0.775837483959644	0.437844948646039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93807335876715	3.28599841237692
Merged-chr11-97428316-8	22.4381148954072	0.465827415051114	0.460723200624799	1.01107870065886	0.311978763714432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72308274648714	4.04688814968523
Merged-chr3-55293215-4	6.08726143483802	0	1.37758397212795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-11178145-2	7.48754768135668	-2.41768511472205	1.3118898325263	-1.8429025477439	0.065343240257882	0.703086539425615	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0
Merged-chr4-63288668-3	11.2582675259202	1.08635300551492	0.672895634267488	1.61444501969094	0.106430933328525	0.948948658223629	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27643187026249	3.6810056070557
Merged-chr4-59864929-3	6.25348187560994	-0.0349572963742136	1.13338416503379	-0.0308432899035353	0.975394516477843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr11-76440030-3	6.6228725019501	0	1.37714919802443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88543087-2	5.29187957676575	0	1.36955821576457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60962828-4	7.67889357366253	0.167428773767994	0.916147366990195	0.182753102612787	0.854991747475388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	1.28129123231014
Merged-chr4-129003909-3	3.85959009638728	0	1.44200118249466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75874734-3	6.10927144165338	0	1.3879145391719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151074630-4	5.83147283659436	0	1.36639137026904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66246133-3	7.64720673673709	-0.320228302118272	0.786858243253757	-0.406970766162515	0.684029459490157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0900981927122	1.41398715281163
Merged-chr6-128201554-4	13.8215376067752	-1.70202675305621	0.448126066953219	-3.79809807679384	0.00014581063116838	0.0079981030269243	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09063151079266	3.44399752839914
Merged-chr8-25982342-2	4.9084995758775	0	1.35934247989208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96829014-2	3.67268507395899	0	1.38132904856794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36188361-5	11.1677444038633	1.77682971862232	0.981551698582396	1.81022530060159	0.0702608556238726	0.73335442604802	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.23659438538296
Merged-chr7-123465846-4	7.53392215227613	0	1.36333278518049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62929348-4	6.03193271829217	0	1.40650136079621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59735630-3	5.72404836932612	0	1.38266556951738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123926295-3	6.44647507065323	0	1.3634801105721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119498916-6	12.353880773217	0	1.33929853745184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65418375-6	13.0878073096988	-0.0761120101856893	0.589627091840014	-0.129084994972282	0.897290394945171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68622000886725	2.52093504802274
Merged-chr9-41072907-7	16.3267553777667	1.51560742517684	0.535513001045556	2.83019725425472	0.00465193138611634	0.116963153662303	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72399108422369	4.20121229317573
Merged-chr4-101314761-4	5.16167135418883	0	1.371022726959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64824887-4	6.18452556500932	0	1.36863549202654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80995395-4	6.2289015971743	0	1.3594626431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94279756-1	2.67906511977533	0.481481920920929	1.31225203895001	0.366912686457843	0.713684148034832	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	1.67198523919243
Merged-chr6-135417599-1	2.62100051218303	-0.488762026431473	1.30249502863813	-0.375250588819916	0.70747410995438	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69895031910627	1.3626301568499
Merged-chr18-11652186-1	1.67467398274669	0	1.46811655808827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56958899-2	2.76516936050655	0	1.44662199651006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43297471-1	1.62569032724369	0	1.58947109430787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26572076-1	3.53880191943761	0	1.44765729300369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12315490-1	1.84177299147451	0	1.47368219675104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104383615-2	2.87199281031651	0	1.42523575751697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53855567-1	3.19554995720802	-2.88275723120671	1.30567135522837	-2.20787353545219	0.0272530901346169	0.398035358418752	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0
Merged-chr1-151511034-1	1.46127961594848	0	1.51179419080287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77434756-1	2.31348273979198	0	1.42225624171036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80622795-1	1.10961202654105	0	2.45014742958423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89674403-1	4.00101727826299	1.32907191025578	1.14872864892606	1.15699378743475	0.247274898564687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.14478899401529
Merged-chr16-10873809-2	4.19461865299508	0	1.36772488067145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61321221-2	3.85071786031985	-2.7377545947305	1.20917337726069	-2.26415388083776	0.023564652009558	0.360812230693897	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0
Merged-chr9-61435272-3	6.39547601077987	0	1.39442904156094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-131813579-2	2.54708136666557	0	1.64862713336954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21144404-1	1.99214861241845	0	1.48745747054656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72929334-1	3.01627499668484	-1.2726616997578	0.985540220551624	-1.29133410612656	0.19658784895497	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43282905033915	1.09982365757507
Merged-chr7-125581085-1	7.01324654618123	-1.25106205351706	0.730677094363391	-1.71219552818616	0.0868606412746342	0.833412834579061	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33300677508841	1.57821186140479
Merged-chr11-115192016-1	4.82199470297819	1.36345958567737	0.749045812185456	1.8202619432572	0.0687191239650905	0.724385518981224	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23802038785844	3.8450580566003
Merged-chr9-47581705-1	3.05146804548514	-0.692757714372797	1.39795282698585	-0.495551567263156	0.620210830970291	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr2-49592157-2	3.33942765095919	0	1.4588443111636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23942395-4	6.08249959595044	0	1.3586952930007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31298046-3	5.71456239203074	0	1.3591568674273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139616874-7	19.4836006746844	0.29751060574075	0.469045775811648	0.634289063206955	0.525892192688284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31968878191574	3.6455417336196
Merged-chr9-109118259-4	8.93777626251201	0	1.35093572536464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23450673-4	5.82713310349883	0	1.37250591685182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84646282-4	5.45263021494041	0	1.37520438185126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34792822-4	7.03129027213828	0	1.34924335275601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84784710-4	6.1112601234664	0	1.35799937911621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118095200-4	5.28880756235879	0	1.3596014802191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97714871-3	7.45345024237174	0	1.36318852564774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-50690519-3	7.15888236010995	0	1.389411352027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119181575-8	38.1550283200571	0.0420899621768089	0.334742567067505	0.125738302557502	0.899939081409716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59117501429847	4.41831423732548
Merged-chr4-101670034-4	5.31357110913664	0	1.38747267512648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24311421-2	3.86936578630277	0	1.37654590299363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-127041441-4	6.49078025451134	0	1.39486220746548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11810612-3	6.14271430297689	0.178208610787477	1.01489824716486	0.175592588996293	0.860614025013918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.00114351279961
Merged-chr8-92846790-3	9.38102977644548	-0.208312704632379	0.590485264568082	-0.352782223591561	0.72425171154626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03433956146572	2.87307670082718
Merged-chrX-17564949-3	7.34900447907129	0	1.3807417609476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130816325-3	11.0572030510575	0	1.3609072400177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152757218-4	6.96964845288077	0	1.36395469303291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184562481-6	13.8785410177825	0.604524732504709	0.502474844785366	1.20309452060816	0.228939745543003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16547705738156	3.99728197211938
Merged-chr14-118431668-1	3.3507580516362	0	1.41555990828212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70969213-2	6.19858467952438	0	1.38143813303388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82223621-4	10.49178040679	0	1.35224550210699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115105338-4	7.84503549078906	0	1.35931329798556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131277244-1	2.88818058473701	1.20458010927823	1.40514585209945	0.857263399011889	0.391299331472598	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr9-96326607-2	4.40474346455732	0	1.42833405793466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72384355-2	3.58939449656241	0	1.4030583939682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101914264-3	6.64900937191914	0	1.36243264645614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33338195-3	8.44351926847658	0	1.37037164454724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58517416-3	8.04763759234399	0	1.37801649863133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86969824-3	11.6788432620754	0.426278361868003	0.555637917624862	0.76718731451982	0.442970154052223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89981315718526	3.06421702437237
Merged-chr5-136442384-2	7.54586318850657	-3.34357433876642	1.16920757660649	-2.85969267191273	0.0042405173731276	0.109388050337126	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	0
Merged-chr8-33629717-3	13.9706587646396	-0.674247856071781	0.486076909577731	-1.38712175539776	0.165404639199315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03005388554459	3.4046561632481
Merged-chr18-75867908-1	5.81245282651434	1.60374212296878	1.01558603027715	1.57912975873755	0.114306297129493	0.987378993431135	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.85237491315173
Merged-chr17-74020700-4	5.39244108754478	0	1.35424996729021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66697826-1	3.86578934978549	-0.125343081618986	1.22601060885011	-0.102236539157314	0.918568925639053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	0.577068348605183
Merged-chr2-5966196-1	3.2938383070276	0	1.40829953098894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112137030-4	5.77499814320863	0	1.39524915374443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55681470-3	4.17563496919295	0	1.39263936664275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40638789-4	11.0417827522863	-0.785507669909292	0.605376662917342	-1.29755195075391	0.194441342357068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17783530413589	2.44530536053508
Merged-chr6-142710904-3	6.12021394522132	0	1.3758926328572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3658054-1	3.47030439937506	0	1.39606502373731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3482254-2	5.36718263293326	0	1.35774980003172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99296957-2	5.74735183392585	1.1123575858316	1.17194262516036	0.94915703375785	0.342540750533965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.17858215524007
Merged-chr19-37284973-2	4.40057518077431	0	1.39107048913495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101654860-5	14.3326864653414	1.01872543176155	0.482475405225423	2.11145567365362	0.0347331640684083	0.466348648430588	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00482594997914	3.91844560197954
Merged-chr12-38767327-5	14.7108096086551	-0.59891010517233	0.567760242065825	-1.05486446707357	0.291487315313812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6292222440708	2.50627091725624
Merged-chr6-134521919-2	8.77142715805238	-1.89352844161731	1.30867809482097	-1.44690160942623	0.147924482325942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr13-107809267-3	6.77252542567858	0	1.36966344832833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103703577-4	4.76549941277302	0	1.36909640965876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23719643-4	11.4151047246529	-2.30884867586609	0.661071969214025	-3.49258293104029	0.000478373026855325	0.0208531510559973	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99398068393232	1.74294609266651
Merged-chr13-13553886-3	7.04074481644929	0	1.36454055484842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89891917-2	7.32100825198617	1.07290958148219	0.736581501845028	1.45660674181297	0.145224965621773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	2.55923665963412
Merged-chr4-63181793-2	9.37258924509061	-0.37466546872796	0.621643583090966	-0.602701417530976	0.546707338386472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01927974294793	3.62609107605049
Merged-chr14-57772633-3	6.51232521850443	0	1.35984370119343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17909598-1	3.01209948815355	0	1.40231051508271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11795047-2	9.96563778747767	-0.598475374827841	0.674049121683582	-0.887880950475866	0.374604792668625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37597656452578	2.74616613688007
Merged-chr6-134517616-5	15.5330514074635	0.872108850793878	0.626417567470639	1.3922164640358	0.163856858626405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72673661893131	3.22631367998891
Merged-chr16-45301176-2	6.71661367981338	-0.036888678231076	1.02284537678897	-0.0360647650839281	0.971230717429787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	0.815775955292901
Merged-chr12-85427950-1	3.30604017661538	0	1.38313958710541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104947624-2	6.17116792534692	-0.546555462121434	0.896974616350369	-0.609332139570762	0.54230430802017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52863192190685	2.04190387384795
Merged-chr3-10247328-2	4.39045314961566	0	1.40844843212744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109139550-2	3.73146893814182	0	1.39559011277976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104710504-1	3.8553251878752	-1.90526185585807	1.03022204388884	-1.84937011119094	0.064404388217551	0.696708087386638	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25210242546693	1.21849460895724
Merged-chr3-61393738-3	3.64955962718002	0	1.38053824430648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41283838-4	6.08272288707674	-1.4387680833131	1.14835186814681	-1.25289828250547	0.210242727025243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.465515277017237
Merged-chr7-67528472-6	19.9928335820219	-1.30629319098177	0.364923877535356	-3.57963200381484	0.000344078406144063	0.0162389630617335	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57728539892342	4.26473916553813
Merged-chr11-29497160-7	26.15355351206	-0.0632025180603418	0.447251878236934	-0.141313029940726	0.887622656505019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99902798122142	3.59954790630567
Merged-chr4-32163035-3	12.1926420233569	-0.994140067721043	0.63141364374913	-1.5744671936738	0.115379480147706	0.992234323896404	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15306395017539	2.97034412238411
Merged-chr6-97803869-3	7.38785973042894	0.609759946533779	1.35047732097159	0.451514392033693	0.651618854660655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.789505890477757
Merged-chr19-47440265-9	34.1349578055935	-0.346604751743125	0.351178535247183	-0.98697590243994	0.323654452141618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40294738662703	5.03196927109828
Merged-chrX-48410311-4	7.04962556543971	0	1.36293353620919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8700986-6	24.051519871852	0.00651833966481147	0.564082756011732	0.0115556442655657	0.990780135043405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63587540885343	4.31434172280752
Merged-chr4-149056045-7	20.8464944934698	-1.40214582189877	0.437409002756718	-3.20557147443677	0.00134794565421699	0.0456529456807362	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80665169783585	3.16756385097124
Merged-chr2-164929216-8	23.9304780254012	-0.207292398648231	0.354294340830432	-0.585085266003282	0.558490385446545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52366906648384	4.29947982987362
Merged-chr4-24617059-3	4.90161264781622	0	1.36161853993227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81109920-4	7.50477928645391	0	1.34607042999865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-21474878-2	3.55162300083485	0	1.45726776271235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81956569-2	6.88462808525082	-0.932065892644408	0.678167549024134	-1.37438881289089	0.169321007329054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95365824654388	2.59674799465613
Merged-chr7-91598720-1	2.32490653184642	-0.999432086400294	1.17526377383738	-0.850389596487794	0.395108518241257	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60230598860646	0.904676873936758
Merged-chr15-27688232-4	7.05608807816685	0	1.36777305361129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65534738-3	6.83341429856123	0	1.40041666420997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45917035-2	5.87530898854559	-1.87731211532131	1.13328946872233	-1.65651598036801	0.0976173715752823	0.896954479624877	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	0.465515277017237
Merged-chr2-35732782-1	3.89776009759818	0	1.38991664121909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17977840-3	5.77403281351731	0	1.35699304341347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84192865-8	35.3159347293021	0.41697639861586	0.346041747695754	1.2049887084216	0.228207660972327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60273912958851	5.0909821569763
Merged-chr1-23187951-2	5.82053658950021	0	1.38097338476154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8795544-4	5.09220844719085	0	1.37057106918434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127454042-6	20.3051430907823	-0.678700437078506	0.541689493827515	-1.25293262064746	0.21023022904775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67871683593548	2.50736436935109
Merged-chr12-112743360-3	5.6086436607453	0	1.37395770696508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5582441-4	6.29473914402915	0	1.36148046571027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59821723-4	6.18913431301551	0	1.36665871601028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80059369-5	10.9124335810874	-1.18933997481107	0.73403883400687	-1.6202684649787	0.105174619908667	0.940945879462677	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48319741580082	1.56728243261454
Merged-chr18-74869855-2	7.31018965843871	0	1.3617214563539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116018320-4	11.1034099051001	0	1.38658709266863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95843400-4	7.75502823016927	0	1.3554482366774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59044946-2	10.0956846132429	-0.417413664728835	0.55124049901159	-0.757226048298854	0.448914447033116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15151308786779	3.48392119176041
Merged-chr6-26404073-1	3.28762108856974	0	1.3907522694189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33747633-2	3.45453218292081	0	1.41836138440627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-171633392-1	3.43986624846185	2.0801099366706	1.20712188464672	1.72319793313943	0.0848527373849243	0.822194287256167	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.58309189503961
Merged-chr10-12940761-4	9.6267653277472	-0.891856058040406	0.643609432406293	-1.38571004888164	0.16583545849893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85094572538454	2.88800704321688
Merged-chr2-93976700-4	9.15779160785132	0	1.36005213064099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86637062-4	7.47306378857066	0	1.35637828995181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30504243-4	5.4807253704494	0	1.36919884354973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128798411-4	8.15254022438505	-0.392364710337994	1.0778204734319	-0.364035310155744	0.715831642074628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.97019877533161
Merged-chr15-6337264-3	4.1013953504105	0	1.37976817649516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31314216-3	6.09445645208711	0	1.36535568587347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132944243-8	32.3094250507467	-0.261611622359021	0.448390927419654	-0.583445396329742	0.559593505256508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51539668142405	2.22543754682626
Merged-chr3-144689480-1	4.26024195413237	0	1.43085311916413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8941895-3	7.17570890892082	0	1.37416004631555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167357084-4	7.797659115942	0	1.36633237956261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32077255-2	6.33308970043455	0	1.3523203024329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58348865-2	2.92839847962562	0	1.50311791735422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154584478-4	19.8036251463487	0.0555392551923467	0.451964542483903	0.122884098135474	0.902198878031529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20024268703897	4.28971187505393
Merged-chr18-83819152-4	10.8107820861133	0	1.3463629665104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96901358-4	6.29110632217693	0	1.35398134778998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16139877-3	6.13070234317485	0	1.35648330900327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103673803-3	5.92075674536774	0	1.38190059771887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35474830-3	9.65221182606697	0.407293087801242	0.958289782025933	0.425020797926258	0.670821513457292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	1.75107117680423
Merged-chr2-166430102-2	4.73945051959701	0	1.39488662393246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89910164-4	7.88167797875353	-0.916979806596543	0.803216865507691	-1.14163415383085	0.253606121244559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16318252143804	1.25298535761957
Merged-chr8-71298701-4	7.334577217354	-2.98325539670417	1.12680671359372	-2.64753072617902	0.0081081991051367	0.174308368831057	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6995072319729	0
Merged-chr16-23284606-3	7.7524925085851	0	1.36890949691386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120796420-3	4.73601791368074	0	1.35940891130597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12925945-1	2.35018791633457	0	1.47263640952243	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73800062-1	6.52274639481424	-0.595695098889464	0.653759545640263	-0.911183787467403	0.362198544872628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76559319867749	2.7799192361311
Merged-chr17-24584683-1	4.06285604502484	-3.94726723385816	1.16964175524483	-3.37476600519613	0.000738784786134976	0.0284974150108548	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39543092688359	0
Merged-chrX-20564087-1	2.4608421595291	0	1.4731418487782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84661282-2	3.44754713219638	0	1.39952809506436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111141217-1	2.60699783237499	-1.05518746198734	1.20728010495569	-0.874020418009015	0.382107134465367	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.577068348605183
Merged-chr8-40322319-2	5.02137950811696	-0.0350569925658695	1.22377087342786	-0.0286466963114367	0.977146369079254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr11-97548108-2	4.24082434906912	0	1.46566577740643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101758699-1	2.23248918264394	0	1.46834200278836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36843921-2	3.36536882398291	0	1.42030242707605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105983634-2	3.78385839776963	0	1.39842421633735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-6129948-1	2.96298287267273	-0.296124955333378	1.32232570804395	-0.22394252303498	0.822802027281922	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71718321757245	1.72472474440372
Merged-chrUn_JH584304-90546-1	1.57241026870549	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119977621-1	2.21244739282129	0	1.49292195838117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-101722434-2	7.99924964505022	1.18171773220954	0.619784034892661	1.90666049088244	0.056564566335095	0.642137030217506	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20722616279249	3.76500226272359
Merged-chr10-118050568-6	21.0107082943984	0.881702876604432	0.565376652817625	1.55949643871985	0.118878926814432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38695093496326	4.31529072281744
Merged-chr6-15767142-2	2.12970132146882	0	1.5699011499334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45179805-2	6.13528553739384	0	1.3768727823732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140614878-4	7.39617569566147	0	1.3507161733376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90862107-4	6.94456127847672	0	1.38015304945466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98955324-8	33.953081626382	-0.367342783773297	0.360392031941956	-1.01928664125532	0.30806690413516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53679646059672	4.02949129093404
Merged-chr5-117667051-4	12.0672484831799	0	1.34575264856776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47025636-3	4.9946326970028	0	1.40607743976081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122669269-3	9.85198127318872	0	1.34956139414615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77442218-4	8.35306115886098	0	1.36506073722184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21286897-4	6.88705039038503	0	1.39796781238556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63324267-4	5.24525052341998	0	1.36468382421398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99111925-3	10.7717682894491	0.160501184483406	0.507212817210996	0.316437556459933	0.751670414409152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21745932519491	3.56016640900593
Merged-chr17-34388758-2	8.19378177073482	0.999725982701654	0.652153088734293	1.53296212188757	0.125285188004385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43545481046358	3.56332420689278
Merged-chr11-86658047-4	5.43341285098045	0	1.38270890837037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40992863-2	7.17261835282759	0.0943589002461186	0.848811679057299	0.111165883521908	0.911484804915538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73054899258335	1.76340839962552
Merged-chr17-74159718-4	6.0194782097775	0	1.37374254438472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116666800-4	7.49554211297991	0	1.37855919441648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66998575-5	11.9669743470589	-3.10456973226441	1.18703039978005	-2.61540878215055	0.00891207226177455	0.186041219691937	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	0
Merged-chr3-62159252-2	6.61677018010902	-5.21808346459543	1.18506670160677	-4.4031981132543	1.06666676250078e-05	0.000930705273559874	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92569592639728	0
Merged-chr14-54750753-1	4.9088958517373	-0.00404585258607067	0.916033146064428	-0.00441670981388932	0.9964759868873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57612722179308	0.897114879832661
Merged-chr4-47294064-3	4.8927040416575	0	1.36280754587406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167163022-2	4.10618988180659	0	1.38263256843344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56849026-2	3.76839909132246	0	1.38280338726714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120033173-2	8.16902560134583	0	1.35388338668682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131094089-7	20.1874397602948	0.160868351632568	0.350652768131766	0.458768235282028	0.646400607601734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7471547283845	4.9381449430222
Merged-chr3-18625065-6	12.8641057287536	0	1.35859236409196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60867914-5	10.5780560200204	0	1.35895882386845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57487855-5	15.8034092811688	-1.04237346588737	0.552021390450755	-1.88828455548835	0.0589877595845938	0.658963342223373	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70215824721949	2.80621469843146
Merged-chr2-73066752-1	2.29018663820449	0	1.46246617774041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51981920-4	6.40468571654143	0	1.35187167479652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118554577-1	2.37268537447777	0	1.53798000333546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66818305-3	9.26844559914863	1.05481100759793	1.05827361764689	0.996728057856472	0.31889652672349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.39207274064238
Merged-chr1-138044746-1	3.54200330230931	0	1.44513715850601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10977806-6	29.4770089308956	-0.434217982977693	0.382939150816974	-1.13390856498041	0.256832904010394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40479105236231	4.06374406940747
Merged-chr3-144603741-2	5.19065962265938	0	1.39113884332673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9508546-4	8.99967561069196	0	1.37410497579196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57879399-3	5.61936313953993	0	1.36176983159652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89002703-6	32.670686315003	0.987380319337959	0.383511210667829	2.57458006929858	0.0100361853907851	0.201684658653488	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98398819479159	5.1985325608447
Merged-chr5-32935783-4	14.0481502617392	1.97396791524702	0.733937461583841	2.68955874113196	0.00715465539373006	0.158937438719972	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51789747318134	3.29914949848371
Merged-chr4-134099464-4	12.3471561143435	1.38314750509115	0.60328285546542	2.2927014957587	0.0218651963746917	0.341739565765344	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35639125793769	4.02937724848954
Merged-chr7-98818733-3	6.69274863838143	0	1.35255643847947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104836410-3	6.16577701139869	0	1.39144846613113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120153026-5	11.39057548992	0	1.3469778846373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-118567817-4	7.55562910697693	0	1.34759203006039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97767061-3	7.13070020847025	0	1.36543829321705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35986533-2	5.97938229165284	0	1.37379717872369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76332326-2	3.73799816209707	0	1.39355549969779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94709886-1	3.65272331970602	0	1.39463212567596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116801663-2	2.92549430211668	0	1.48028323360878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26928235-2	3.06207319025201	0	1.47399433327766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41547462-2	2.59900151404309	0	2.23021907347159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105526767-1	2.41323932430372	0	1.42377587576151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62761033-2	2.99133743953882	0	1.42116076982387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191267903-2	6.05254161835595	0	1.38540496207195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47398413-2	4.45715775737989	0	1.42381801866867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64660722-5	20.5893802452077	0.219033427039721	0.438690349381395	0.49928936742872	0.617575544493469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03178215187086	4.31881588941554
Merged-chr13-76759404-2	7.58166338001429	1.52227537685784	0.832946803907529	1.82757814750777	0.0676128879019096	0.717464453863739	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.7361950385808
Merged-chr10-60374420-2	5.42142269454388	0	1.36731567389111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38944976-2	5.30388708536066	0	1.36959896511053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45599912-2	8.14108081493739	0.907560909573238	0.648718796754992	1.39900510685527	0.161811451655922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43491183200938	2.9323967455829
Merged-chr16-58556460-9	28.1432915574901	-0.372775484051046	0.465335725551282	-0.801089328805393	0.42307993351249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95584382157797	3.8869171920263
Merged-chr17-57284033-8	21.0012872265235	-0.0150656569932212	0.373621775026165	-0.0403232841345131	0.967835390817803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8119680473258	4.70573125558735
Merged-chr13-113755993-3	5.20855017043554	0	1.40103548738949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94408865-3	4.89616404446766	0	1.37240611413167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91515183-4	8.29707106057253	-0.705256846198766	0.666770354184504	-1.05772076063779	0.29018276750842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36464606138474	2.65195929168926
Merged-chr3-96152074-1	3.57969986821027	0	1.38732200113011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103013471-3	8.9515418854435	0.618260244759769	1.4360146342615	0.430538958314809	0.666803633697663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr9-106394860-3	6.55321496468117	1.12647082517041	0.999531596695424	1.12699871509281	0.259743024244036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.64434148891112
Merged-chr6-125444083-5	27.9484861200254	-0.326870912422571	0.455658105246182	-0.717360030819533	0.473151975122638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4661885372981	3.43732508480473
Merged-chr2-93507812-3	5.16619509297404	0	1.36415645787997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20355497-1	3.56739292691485	0	1.40430690965177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102534216-2	3.55207356947832	0	1.97918107651289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73106525-2	2.99012624528619	0	1.43261989585286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4151171-4	8.27254567323796	0	1.42697019210123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156324870-2	6.86213273132379	2.12760423496125	0.878297771365757	2.42241789097656	0.015417609493304	0.272282597286066	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	2.67362121837531
Merged-chr10-88330927-4	5.31776874602375	0	1.38690453945165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26626802-4	8.02323822988193	0	1.3528007876066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-59174143-4	6.45523150337136	0	1.38444790496742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164862211-3	21.3722595665161	0.472360587659777	0.393851045517823	1.19933815851303	0.230396483298575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86343680983346	4.35464181657178
Merged-chr11-115743049-6	15.8157333471523	-1.20352640748153	0.5632019274554	-2.13693588180563	0.0326032070463387	0.446867809337348	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89364381878442	2.11318657531541
Merged-chr19-42166374-3	4.35907720951627	0	1.37872461767016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37671327-4	11.4104023349785	0	1.372402997715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109123370-4	7.27598431620584	0	1.36121007714998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46144615-4	12.8867579302074	-0.620821663207643	0.666555771316459	-0.931387424613411	0.35165319348471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58250770945523	2.7666186150413
Merged-chr5-64410887-7	21.0230030018088	0.474200151055603	0.45603881887431	1.03982409266413	0.298421633632044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60233872278206	3.36266688101821
Merged-chr3-146093489-1	3.61463409280036	0	1.48468612115293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93456323-4	12.0059101050681	0.952935117026647	0.852446687685914	1.11788236237215	0.263617238884595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	2.42698818581862
Merged-chr5-86114129-3	7.93509455829268	1.13763806764746	0.849120347014117	1.33978425042798	0.180315497435761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	2.27026908475276
Merged-chr8-104077204-2	5.51174718231163	0	1.39424900725131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122652472-2	10.8220343166326	1.44934679225148	0.624287096273052	2.32160299468622	0.0202543225010625	0.323064764329594	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01243752527112	3.61370370539281
Merged-chr19-32987915-2	3.53739155918678	0	1.37579768834772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66436786-7	21.3013876681936	-0.113973812910821	0.385323478131857	-0.295787356284114	0.767392479407354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08190042342732	4.09860849558796
Merged-chr11-33932021-4	8.70356935081101	0	1.37334660170489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-27185074-6	19.4478579324393	-0.429615834292849	0.479444042636022	-0.896070857259559	0.370214920597465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36192758144056	3.66957081293024
Merged-chr10-44632988-3	6.73613642136891	0	1.35465712963658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56163059-3	6.51047028608328	0	1.37438135215267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45661645-5	14.9032233297134	1.02172124389958	0.630149412248515	1.6213952184036	0.104932905595401	0.939711336945699	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42760559021134	3.61107887422074
Merged-chr4-48591066-2	3.83598756816976	0	1.43291781938835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10077310-6	16.1261033024233	-0.115608126676943	0.515727548103462	-0.22416511800093	0.82262882461188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27358268966891	3.43083643926422
Merged-chr7-74974641-4	6.48435630979744	0	1.36140672066698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-61649278-4	14.3483305150416	-1.31671770193283	0.582761039436103	-2.25944703373946	0.023855591511739	0.363387267815781	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53384860123218	1.610618888618
Merged-chr11-117727321-3	5.24681914823845	0	1.38367720030623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60589554-6	16.8260585106957	-1.56721829866175	0.75388737404563	-2.07884937805961	0.0376311967596312	0.488639547851514	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84800290400231	1.40373237117109
Merged-chr14-61744074-5	14.6558218400709	-0.966622152996954	0.465508424517026	-2.07648691642873	0.0378489399564059	0.490448278209838	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5681588226824	3.48214437749051
Merged-chr7-79924751-4	6.96321480388401	0	1.35175250535196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79838248-1	2.51505561460607	0	1.40861571764671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140844997-1	1.80564454924924	0	1.61449548517369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-14669098-1	2.37224441328134	1.13367200125731	1.36548949055833	0.830231216787881	0.406408068780259	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.67591700901439
Merged-chr6-134916976-1	14.4548861763133	-0.130555494162183	0.555350333712471	-0.235086730369694	0.814141417751672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85236652265709	3.48831722201995
Merged-chr19-38973911-1	1.77807755676339	0	1.76275674108993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80497028-1	2.49598451050126	0	1.4166302141037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20099704-3	8.75718687001556	-0.0368480632093482	0.724703266921546	-0.0508457252661139	0.959448454482208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49065419848114	2.45851098297781
Merged-chr10-25196519-1	2.20422439112504	0	1.48572680999282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83161727-3	10.9031253165055	0.499005254840863	0.809548468658185	0.616399479660504	0.537630896693607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32843128278891	2.37705772017261
Merged-chr3-97963691-1	1.99023316318418	0	1.4270902429388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115079204-1	2.23514842546249	0	1.48641950774371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77717256-2	7.67434134616957	1.59822013482925	0.630376447205358	2.53534240042537	0.0112337463705	0.217160461932435	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63600110697839	4.79096559042538
Merged-chr12-8854550-2	2.28674029611055	0	1.52345432734652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106763095-1	2.8464613911633	-2.83239575403422	1.50988522180113	-1.87590136861892	0.0606688246945288	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66127991928328	0
Merged-chr7-99953852-1	1.55578778343807	-1.930559039803	1.44366963779571	-1.33725818515564	0.181138375043932	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr16-5444994-3	6.64691890445256	0	1.35961609204343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75858153-1	6.10385203089255	1.16281688916005	0.689647412768196	1.68610346045175	0.0917758736094615	0.861482423335645	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42194161705889	3.29885658428169
Merged-chr8-77421800-3	2.9237245232723	0	1.4618744265991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90415163-1	3.68232178185402	0	1.40413701726443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116206094-3	5.94186464229436	0	1.41256624439016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24373696-1	3.3791776588825	0	1.38396678468512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17469017-2	2.23040072926299	0	1.66634429466196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24339776-1	2.00559306810365	0	1.56848734192248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133816487-1	6.11427216344578	-1.41093970781632	0.831606480483683	-1.69664347372051	0.0897640854467504	0.850084655191621	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83042413708335	1.55002395216531
Merged-chr9-119265562-4	8.33912376248419	-0.69525896193035	1.37289350049869	-0.506418714691128	0.612562739416901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr10-69218757-4	12.1672261786395	0	1.36659654769438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9452577-3	5.76245406510096	0	1.36993967242544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48390107-4	10.8604878095334	3.53476864792433	0.780891830679417	4.52657911000157	5.99461646543235e-06	0.000578794842337359	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	4.40012961182643
Merged-chr13-69525256-2	6.66835138878874	2.05027875347484	1.17391909293877	1.74652475269161	0.0807198097588611	0.798793557647715	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.57989517605929
Merged-chr3-51788944-4	14.3166766721622	0	1.35632399448594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18849510-4	5.64082685841016	0	1.36897152108583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100927547-3	3.88490618800756	0	1.37619950705906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28867759-3	8.80379102677622	0	1.35934668518814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29972955-3	6.22073417761346	0	1.3844944492471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123750481-3	7.42038487565449	0	1.42429394027631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90070755-2	4.79514631308978	0	1.3918840787718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103470694-3	7.42567086108353	1.27305555021901	0.902199134701644	1.41105827001265	0.158227433183289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	2.06634306869099
Merged-chr1-170218664-4	6.54408529048592	0	1.35739513156618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78048602-4	6.50142885275646	0	1.36037238920048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56173166-3	7.55161593634272	0	1.36107456240784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64038672-2	4.45016031175489	0	1.3879712911398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126803791-4	6.41272680508881	0	1.35972006291501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25466410-1	2.76209606981885	0	1.4292501282431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106328896-3	6.61960121704477	0	1.37848613185325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34727495-3	8.62606975819065	0	1.36417323647811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33746310-3	5.65070112055328	0	1.36772909400343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67291289-4	7.27813097446678	0	1.3833857727084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191329160-3	5.97644840071043	1.94302995090069	1.18151148001301	1.64452904924741	0.100066968932735	0.911451133413967	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.788686275880602
Merged-chr1-80615625-4	8.26601481314932	0	1.37854928004671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87153104-5	20.403834954593	0.28993407159088	0.516140700489551	0.561734564462524	0.574296880915943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16212329999982	4.38628179156807
Merged-chr19-11957575-4	10.0470229025804	3.43519272664466	0.705273623599548	4.87072337841342	1.11190416532012e-06	0.000139267277701927	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	4.66530635568213
Merged-chr2-124616133-3	8.29877622945609	0	1.36799821689188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157013205-9	28.9415630177953	-0.863903200391873	0.304209992509388	-2.83982519201835	0.00451382616798045	0.114443599190881	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63948166463469	4.6331931614539
Merged-chr3-8986075-2	5.42976154226095	0	1.38658465784469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-38902751-4	8.92385070806177	-1.07294537446349	0.596537223802292	-1.79862267039197	0.0720783887495071	0.745171003049536	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2297541645343	2.6611395155814
Merged-chr2-165333373-2	4.17778427818955	0	1.44497882253951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34710855-2	10.0404338847262	1.54887789633173	0.762372399099263	2.03165526212874	0.0421885679685109	0.526067892865036	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	2.67558875203953
Merged-chr4-139218555-9	24.2928804449355	0.465574251965368	0.494825527953353	0.940885677202283	0.346763448238441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80631644969051	4.55149649711435
Merged-chr5-93328280-1	6.39872715140534	0.413677936891742	1.21641922521612	0.340078427170733	0.733797467226885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.577068348605183
Merged-chr1-43321143-1	3.71349767897501	0	1.43306693927034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44832301-4	6.82281345865963	0	1.35694804404994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146948691-1	7.27206956946622	-0.810896756946447	0.641604285238901	-1.26385807514442	0.206280972025633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90999274462067	2.93768714442417
Merged-chr18-5834585-2	3.90125840492781	0	1.36962789806814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34340562-4	18.7219785736723	0.00473620194085701	0.537437915314707	0.00881255640120521	0.992968688316351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27028269168757	3.26619118338657
Merged-chr10-18996576-4	8.06149853950066	0	1.40127064411334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66848896-7	14.4659659176671	0.975390844014462	0.527340751833533	1.84964056091452	0.0643653726834567	0.69642462056131	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76501444179017	3.63887635853806
Merged-chr4-149001707-3	3.93198153049346	0	1.38099456921716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128739512-1	8.36084634482603	-1.02338561663145	0.77944259089046	-1.31297112653582	0.189192677708101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71230632646541	1.56608458088645
Merged-chr1-71730389-1	3.0907417177634	0	1.49830614161137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81144688-2	3.90332494157673	0	1.49167450936412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43249325-7	28.8213771040763	-1.49921370242567	0.356455455712077	-4.20589355107708	2.60052622736191e-05	0.00193246933848928	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06739673657722	3.63080491378261
Merged-chr18-67873617-6	19.0094603065194	2.84600281156767	0.546049597835558	5.21198591272425	1.86829739605688e-07	2.93910262332447e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14016883463966	5.29706226867685
Merged-chr2-79698277-7	33.2728687275471	1.64426501541863	0.561776731412582	2.92690124648656	0.00342357569221557	0.093990985380377	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	3.82888626983103
Merged-chr17-25681824-6	14.7050818019251	-0.487505956267699	0.534672685142471	-0.911783919049084	0.361882477254721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78372581218911	3.43360102406087
Merged-chr5-43113585-7	18.0745446512843	0.152332215052187	0.526514671235045	0.2893218809931	0.772335069377682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89447108714726	3.57484572210074
Merged-chr5-124022515-7	17.2175552994607	-0.591121942706212	0.385480727207769	-1.5334669180169	0.125160851712866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74986914555747	4.03031942595707
Merged-chr2-26188762-3	5.70256314081638	0	1.39018591951953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35901907-3	8.10240876980492	0	1.35714215364118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36564723-7	18.2297047889346	-0.357767143650678	0.503039465636577	-0.711210885209449	0.476953564227828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18263333202392	3.87393809476777
Merged-chr2-102876399-6	15.2906751993267	1.02265590801464	0.586222293588338	1.74448484678882	0.0810745814499783	0.801005665765062	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89914403434115	3.80016321997646
Merged-chrX-159752095-3	5.21924826495301	0	1.40976592815925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62090389-1	2.77927940751671	0	1.44034697536392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121184655-3	5.01473489097498	0	1.39139442999369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4155727-1	1.81178631413198	-0.683340509732111	1.48180786353353	-0.461153248372303	0.644688660923427	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr1-87553886-2	2.75890639205653	0	1.44700087061385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82799925-1	2.94517041150899	0	1.49872088590554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164456223-3	6.1452710197083	0	1.37340919803823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36828198-2	4.25109642382187	0	1.39231899616137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103470666-2	2.56156247683634	0	1.52366359554667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47469058-2	5.41686008868466	2.44193749057356	1.20278231473469	2.03024060186003	0.0423320886067217	0.526797686579486	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.17858215524007
Merged-chr2-126478346-1	2.36941446403411	0	1.41539638502856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46724189-2	2.42595945025054	0	1.42431530899328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10742326-2	2.53849152428705	0	1.52379101679395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130965579-2	1.72973140331371	0	1.81229423779399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57023742-4	9.80225443131552	0.624038829267314	1.37077120507755	0.455246526156793	0.648931891855702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr17-26571062-3	6.20912823807459	0	1.36934494858359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73338625-3	6.34731805244265	0	1.36166935959335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-93547307-4	9.5195224279474	0	1.35312050386721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90954913-3	6.68206106441359	-0.454863437516964	0.846017215304627	-0.537652697000001	0.590816841975604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99596521771025	1.88173439965075
Merged-chr10-43841238-4	7.43798357461608	0	1.3602320604785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83178014-3	27.3757412846094	1.61274917755815	0.559294442947289	2.88354228777873	0.00393229846019218	0.10383144877838	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43089370849363	3.73461124145497
Merged-chr15-79446022-2	3.75290129380954	0	1.38332286544309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55763314-4	6.92052993419753	0	1.3678376154742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80564356-2	4.85707772826153	0	1.36998778594366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64261751-4	7.94072843320353	0	1.35159011146365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50761715-2	4.10788298558676	-1.55159809427465	1.27205133221383	-1.21976059847703	0.222555641990754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.303163067301871
Merged-chr8-117371430-4	4.84273587606732	0	1.39344136440332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151981554-4	6.3207752692843	-1.53096079906109	1.19674756373489	-1.27926794710421	0.200802715787913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.413263464506793
Merged-chr16-32688963-2	4.24135113361997	0	1.39857530207662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153410363-2	3.42708983699195	0	1.42303416156874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10129842-4	5.68708817673287	0	1.3674252113004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75710406-4	6.45635297265743	0	1.39438840555318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65375527-3	5.93964315350752	-1.88305694279676	1.37811668113517	-1.36639877346646	0.171813833568145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr17-26639921-1	2.54648716505094	0	1.48034713618505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47429604-1	2.6855297653935	3.21649773694221	1.44118390099632	2.23184406564532	0.0256252707834273	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.56277881816808
Merged-chr6-24984800-1	4.00049008700773	0	1.41018369915577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176832183-4	7.71803573265533	0	1.37606145703939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80720332-3	6.84407904985452	0	1.38177845615571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20361908-3	6.16920096724332	0	1.36824303606977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-67576915-4	6.44904463763002	0	1.37888716118926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69397356-2	4.48457537854392	0	1.37609077547318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25397131-3	6.37809539402049	0	1.39202012979682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67424091-3	4.00250557221913	0	1.37719794054213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144705341-4	12.7909780463378	0	1.366429763099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85843423-4	7.91339132508095	0	1.34766098573418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115262076-3	4.9057310248995	0	1.37465108902596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105977636-5	18.9342835785675	0.947812471091221	0.462303976973034	2.0501932025268	0.0403455810620825	0.50991523853842	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70889516846249	4.70357443274875
Merged-chr6-116439717-1	3.09404488728424	0	1.3914084815823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81657802-2	4.86202969514473	0	1.37075675359325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64190991-4	5.4611164001616	0	1.36066151491848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52559084-6	14.1445010942611	0.231802402498897	0.877645377408288	0.264118524937049	0.791688589750619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.56533893459231
Merged-chr6-134042124-3	8.70161494706396	0	1.38128826590659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112366915-3	4.95334567823574	0	1.37804623722402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121651962-3	4.32563771674058	0	1.36894540417621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98105477-2	3.74461876370535	0	1.38628553358739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44441397-4	9.06919212043609	3.78925328613464	0.861790571837114	4.39695374951356	1.09780725856911e-05	0.000948739344492181	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11812572528152	4.84733030362553
Merged-chr18-21122143-3	4.96502343978784	0	1.37073360209546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102906443-4	8.73382665606555	0	1.35336284256058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32215358-6	14.3718368557604	-1.02911351221341	0.466139637676904	-2.20773654294279	0.0272626438808493	0.398035358418752	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14191325121471	3.1990218110387
Merged-chr13-9027466-4	7.60571744970783	0	1.36476460963341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9864997-5	11.1975638217949	-1.07261173361209	0.75917743912746	-1.41286039116872	0.157696777236732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97058611410777	1.71465869101023
Merged-chr13-54819675-7	15.5886788066955	-1.1712038140632	0.566110424064991	-2.06886106363013	0.038559126261306	0.496220536088621	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91689998067127	2.03997748580051
Merged-chr13-52892154-1	3.08734711572288	0	1.40891055582647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82918828-1	1.88013227650049	0	1.53312922994071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31994806-3	5.2830736917792	0	1.38525182374354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3816650-1	1.68528208863697	-1.2903981351158	1.62090743027319	-0.796096131719454	0.42597616237877	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr19-38361705-1	1.54783529239978	0	1.65537925781458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11941349-2	6.30111339531453	0	1.39064947076519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165800047-2	4.91395504169637	-0.428571930787971	1.14896134290216	-0.373008137684982	0.709142387361291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.15716269587666
Merged-chr10-8893471-1	2.34311254847238	1.52926373622694	1.57861878244856	0.968735297735993	0.332677276343346	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr10-118604130-2	3.87983579461356	0	1.45033720999388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86139144-2	4.92919473126922	0	1.40434857923605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20892089-3	5.4563606632142	0	1.3784464412437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83076692-1	1.3930246975562	0	1.70967025426947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55183494-1	1.50449141571184	0	1.55653294000935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101336998-1	4.72681844318213	0	1.38152744659502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-18782313-1	2.563450081709	0	1.39693935737597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174117158-1	4.9563487199035	0.536265450812407	1.03649289801927	0.517384587812619	0.60488771629309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95160684218358	1.91166806069008
Merged-chr12-70831350-2	4.27237294666685	0	1.39866919686138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17589446-1	8.8381921250063	-0.844114435605829	0.642546823834888	-1.31370104760293	0.188946828290313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48933577703069	2.8062683988595
Merged-chr11-11539220-1	5.13376586158376	-1.64022017713164	0.832560285846618	-1.97009178195874	0.0488278526033869	0.58041400386344	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45488017194966	1.85339383083177
Merged-chrX-167203109-1	1.95649279657531	0	1.53424849117319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107731088-1	2.36298554896206	-2.16499220152157	1.38381498672054	-1.5645098675021	0.117697877492984	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09032553771468	0.55634759613363
Merged-chr10-77540002-1	2.65075172714465	0	1.45667474311319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96969847-1	2.14692235056619	0	1.48413365341114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106090589-2	3.43050204718632	0	1.39123727478918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95024559-4	6.7544653699697	0	1.36506724578166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111957909-4	5.80595473782214	0	1.35394050211589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75872947-4	7.73963218051429	0	1.35010433685432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93549203-6	19.8409069644918	-0.031936257944448	0.361482271097862	-0.0883480615728512	0.929600040656074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62606653478855	4.57444434489826
Merged-chr19-47220417-3	6.20129978581444	2.1631552745883	1.26875760224991	1.70493975425435	0.0882056610573325	0.840956693710129	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr7-113770544-3	6.74568702025067	0	1.37737800734321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22617757-3	6.16363516528224	0	1.34991342022745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177139828-4	7.64259820301335	0	1.37800994836442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58900058-5	10.041094807698	0	1.36776405860687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67207186-6	18.3419766930038	1.34124991285597	0.530116860986471	2.53010234452852	0.0114029259884795	0.219764667053258	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57125221218502	4.32970596208654
Merged-chr5-35631421-4	10.8738615713764	0	1.36367788914719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82800638-4	7.68916591648309	0	1.36108374807307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-123060958-8	35.8671779636151	0.0660258276587838	0.431827653816119	0.152898562830112	0.878478269279576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07857293250404	4.14973509070736
Merged-chr11-88197414-5	17.5685033605376	-0.0732333953431529	0.405268125794029	-0.180703565570742	0.856600259943249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99924746568953	4.96677996833401
Merged-chr15-75873805-2	3.58596950045775	0	1.42099244095252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181237101-4	10.7019118470128	0	1.34753465826834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25083318-4	6.37147014673741	0	1.35396472132236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49272994-3	5.09982097335381	0	1.39745307458565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147471410-3	6.46030226448578	2.45359238703649	1.16912257946835	2.09866136376584	0.0358467628303399	0.474788191018737	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14143228603163
Merged-chr14-51844104-4	13.9665689343696	-0.171772657071526	0.522769143495164	-0.328582241719696	0.742471472473681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48320834846203	3.46397602840705
Merged-chr6-129917207-3	10.0101767264338	1.1743968260422	0.820411696038992	1.43147255422159	0.152294827434274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46316345736407	1.77791452057258
Merged-chr3-19474224-7	18.7747120812334	0.342685015558011	0.490552961566117	0.698568844562614	0.484821519811758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26367626507607	4.35089926374321
Merged-chr15-58791365-4	5.83600360590325	0	1.36165873569047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118470916-3	7.45642976331909	-1.16383753894248	0.795436762352825	-1.46314275882845	0.143428319828192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27386322119676	1.30139522650344
Merged-chr9-90257560-3	8.12378906598028	0	1.36634448277683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29787601-3	5.26912600011304	0	1.37537986650727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36266054-2	8.00474532003584	0.122285490325024	0.789927345790449	0.154805997003	0.876974263284986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69893056290411	2.32243667504731
Merged-chr15-55106720-4	5.80111077321131	0	1.35884449349851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-91716922-6	21.9236346365424	-0.65876776839001	0.432659817152863	-1.52259984004306	0.127858849833759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.224039487468	3.47306517128455
Merged-chr19-43930545-7	21.4988123452045	-1.60295200175956	0.571307055543373	-2.8057626563617	0.00501976516450815	0.123470323338235	C57BL6J_F1_Control-BALBCJ_F1_Control	4.382994001364	2.81255916556815
Merged-chr9-115458294-8	29.8144865303497	0.339196397082985	0.506171985365569	0.670120842104705	0.502780759575889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13367531440498	5.27991698349722
Merged-chr1-13267646-7	14.5345106678459	0.680747549225868	0.530215251652009	1.28390789798075	0.199174183452793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38478652860388	3.20857823956857
Merged-chr19-34511300-3	7.28152725053788	0	1.35616498287711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123903103-6	15.1726837279667	-0.454064255673843	0.539310977987222	-0.841934012484725	0.399824890682248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81440921806169	3.37540979749308
Merged-chr4-102511091-3	5.97781732913837	0	1.39580385331767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29707079-7	20.2134305598801	0.131033414448906	0.411991295046864	0.318048987986508	0.750447777613925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23324022019608	4.11010087008964
Merged-chr11-88950335-5	15.097471806511	-0.49094669509232	0.550065698497237	-0.892523741134143	0.372112273350968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64874990038956	3.27181206941876
Merged-chr12-86772218-4	5.85268398070262	0	1.3651494309025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23878456-1	2.37919610565285	0	1.40852366187188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59819671-2	7.10674742208699	0.464560685171946	0.876148680204708	0.530230422835773	0.59595218022722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	1.55002395216531
Merged-chr13-54342863-3	6.05477187669536	-1.88017689984805	1.28335826527487	-1.46504444684069	0.142908791686927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr8-35469159-5	14.1140677687125	-1.65235826998006	0.487289130525369	-3.3909196131639	0.000696585294998329	0.0274986783230314	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72269767866636	2.6904483100301
Merged-chr16-59610960-7	21.9005690395437	1.68779865520103	0.50449225473216	3.34553928106805	0.000821227259061402	0.0308507896166681	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8441881967244	4.46785888547547
Merged-chr1-173429824-3	5.31598544490823	1.27293846092337	1.34089345064125	0.949321111468344	0.342457319412499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr4-11999212-3	4.85483637835709	0	1.37919984310501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148772934-3	7.34476437766754	-2.25073065847248	1.23673766570296	-1.8198933540147	0.0687752472168748	0.724385518981224	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	0
Merged-chr1-59496080-3	11.189083283265	-2.4444188157493	1.01533437664991	-2.40750128427114	0.0160621057116183	0.278684967883135	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01209236986533	0.67591700901439
Merged-chr13-52194627-2	3.39107165169874	0	1.46091552674699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3766444-6	23.8723240302121	-0.825197154026384	0.471445130589313	-1.75035672336858	0.0800567786664499	0.793980374298403	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33721507765715	3.56358129260135
Merged-chr14-19419631-2	7.85589872806022	0	1.38317999024747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6632687-2	3.58349027135013	0	1.40691479617381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5115265-2	3.6312861091967	0	1.39398481116447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102431704-2	6.64554985255489	-2.40876104619329	1.21220022622582	-1.98709833085328	0.0469115011885035	0.565424011775136	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chrX-21740055-2	4.37581554345818	0	1.38202156708453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79243495-2	3.85051218921641	0	1.38670673011809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5320327-4	5.70530610081267	0	1.36816006884428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15189464-2	5.10311707067229	0	1.3981690149515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-67003313-2	2.71357594428861	0	1.46769955194882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89235558-1	2.97341101489813	0	1.48092895736293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21351484-2	2.95817729004494	0	1.40134576478566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122597490-1	4.67162860634527	-0.684361481175294	1.34557841447694	-0.508600222634608	0.611032472884198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.413263464506793
Merged-chr16-12589115-4	7.67061952201188	0	1.39261751060041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85413978-4	9.40439316057262	0	1.35828393425016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130838078-4	5.19162474254624	0	1.36855026476875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100531116-3	8.79825645063315	1.344297651917	0.900904664386978	1.49216416015753	0.135656115374145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.47549643264008
Merged-chr5-36575380-3	7.76767910039997	1.88815807012813	0.874365286103901	2.15946138317271	0.0308143901583585	0.430269569642489	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.75922090781847
Merged-chr5-72195626-3	5.93372298678094	0	1.38624951997571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74454520-3	5.28923376919564	0	1.35449047940547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30407351-7	18.2085484971065	0.395295112087995	0.555993941355156	0.710970179143535	0.477102715392446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30286651899677	3.28983361265128
Merged-chr18-55204226-2	6.67115790385264	-1.47332567515556	0.681387850718578	-2.16224236108968	0.0305994999289984	0.42859010993054	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45384887345571	2.39041776842166
Merged-chr17-26501982-7	24.7978672564651	0.323212631574075	0.51154785458848	0.631832640240641	0.527496242700616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86530659721249	4.20120668094408
Merged-chr7-101616667-3	5.85699844001559	0	1.40796241354484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87031072-4	5.46874373665956	0	1.35970547104441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23969431-3	3.45586305995027	0	1.38446863897604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67414299-4	5.47649659803311	0	1.38631802550077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56883895-4	6.9689555831686	0	1.35590036322206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7598347-2	3.54856264831783	0	1.38826818486711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64040093-4	13.2103603453784	1.0503790805757	0.516364110898815	2.03418296974075	0.0419331509683755	0.524130640029875	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14529268526927	4.07042570450225
Merged-chr5-137075714-6	16.1884440605297	-1.3806891015418	0.589569309862207	-2.34186053860994	0.019187883290146	0.311725686721174	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44947228354175	2.30491993428409
Merged-chr4-150570060-2	5.53276271800717	0	1.37387866659192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133178084-2	8.04662549280257	-0.00258057299320409	0.781169383494935	-0.00330347431393004	0.997364213641938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5824508526072	2.62422746495551
Merged-chr10-13682706-1	4.02920827164963	-1.20355034299682	0.990928550430986	-1.21456823751153	0.224530809240949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52489444364345	0.730937814817307
Merged-chr2-3621578-5	14.5549181486359	0	1.3385475278261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102419166-1	2.00176272735676	0	1.58403097693424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118149717-1	3.43380750587695	0	1.41529198741598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84467580-3	5.05310518315771	0	1.37086143166266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28454844-1	3.21839602085757	0	1.41541926835597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145745789-4	9.13270519796632	-0.422544505247986	0.976656185984738	-0.432644067903942	0.665273369487104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.662147012823607
Merged-chr9-100458520-7	28.1467591107301	-0.277477357811743	0.380090946396397	-0.730028853469089	0.465372547965482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.425321870816	4.38621801769011
Merged-chr13-58601437-4	6.15008816298365	0	1.35643859997108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45414562-1	4.56762066293954	1.83657755013449	1.23904136281913	1.48225685214884	0.138271964415435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.14143228603163
Merged-chr19-32330433-4	9.64569200029177	0	1.34975863533823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109455325-5	15.2477378073993	-0.564374475249231	0.552334361502238	-1.02179859626015	0.306876233894198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47573556487142	3.75818460204251
Merged-chr9-110888023-6	15.2926195411407	-0.113712422227604	0.597037719719566	-0.190461035327912	0.848947873577095	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41413586417374	1.81828307388421
Merged-chr4-95195992-2	3.23935183771963	0	1.4426640235768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20828520-4	5.75317955864281	0	1.37166481677296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3148637-2	6.48095911971658	0	1.42437963487544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67342238-4	6.79204001417247	0	1.38212634329489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16468396-2	3.52225304775509	0	1.41813731382093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90292033-3	7.56351754666495	-0.455210715763575	0.943544105233322	-0.48244773428054	0.629487918519431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66014775609343	2.27100628714386
Merged-chr6-136847998-8	22.3402500687836	0.106407974327241	0.389847034928619	0.272948014973937	0.784893176693057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40380933667209	4.39256966599153
Merged-chr1-120948574-4	6.38426693599482	0	1.36656055966274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35614265-3	8.86824653175548	-0.673229533696476	1.37911524445105	-0.488160461140035	0.625436188146527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.303163067301871
Merged-chr18-64847081-5	14.4603766851895	0.319417646218466	0.438105978940261	0.729087621655172	0.465948065949364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59851487755596	4.89477883904306
Merged-chrX-74075054-1	3.90064915666927	0	1.39913322086422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46062978-4	5.01711507329107	0	1.37213629731408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100550472-1	4.66585344704568	0.35218214415683	0.821189555039676	0.428868270419994	0.668019092242933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36155420913382	2.54127668853371
Merged-chr2-174085193-3	4.41827055417802	0	1.38827527404463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4492711-4	5.26263565313883	0	1.35933242606412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96690431-2	10.4887845072588	-0.434427829325669	0.773282245527496	-0.561797237474816	0.574254174502252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83247173307855	2.27029500171431
Merged-chr3-116651191-4	9.42087838542128	-0.279461550549645	0.7293834515072	-0.383147643358462	0.701610295723887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69895031910627	1.88850993345567
Merged-chr15-50745533-2	4.44820580077497	0	1.45350978132513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-34700389-3	4.71350712695812	0	1.3629727483917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131702081-2	4.99288327964651	0	1.36944109583785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37356207-8	20.4704362689989	0.578357419513667	0.530631088507637	1.08994258353813	0.275738436895004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19067769298368	3.37858407582871
Merged-chr19-32138861-4	8.56171781771647	0	1.36629508592459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19706647-2	5.18771622919589	0	1.362950886873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34402877-5	9.96207409977018	-2.35815506893583	1.04294597720955	-2.2610519820453	0.0237560383295019	0.362790056299409	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	0.600815099743027
Merged-chr12-116461379-8	19.9812956485674	-0.34460656127035	0.481943170565299	-0.715035677061554	0.474586998157949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52893211101984	3.80647710868453
Merged-chr1-151564598-4	5.76515557593258	0	1.36602378413662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61666073-3	6.72187285986509	0	1.35457419596432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142361815-3	5.80968020186181	0	1.36048822274153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102437728-4	6.88856928461797	0	1.36112766835188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24152119-1	2.39319986648477	0	1.45957823341042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19844301-2	3.60423377902282	0	1.3785057487415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85671320-1	2.05272688240407	0	1.50290186976528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-51911486-1	2.01061685001563	0	1.58431048260747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103164736-2	3.69312787969576	0	1.44949115253742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106193381-2	4.65504191467831	0	1.39083167139222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171632703-1	3.40772836350635	-1.08829272105859	1.0434612423311	-1.04296420116892	0.296964873106401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48586599042228	1.38950137562363
Merged-chr6-5323508-1	2.32641209335981	0	1.46895047699467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87901451-2	2.9670871186914	0	1.43451008418461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139412613-1	2.36011701234209	0	1.43809682184219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8331090-1	1.6234266839322	0	1.83311268484385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28870884-1	1.83076892848873	0	1.67797058712301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63327306-1	2.40133949249125	0	1.44228438572466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119210801-1	1.71144650801307	0	1.58431679747819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24388030-4	6.4116735219747	-0.149508146546685	0.951852788816733	-0.157070660824077	0.875189159810953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63379099656069	1.48299123756315
Merged-chr10-8881466-2	10.8834304428918	0	1.36076746287545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36740148-1	1.68446770104524	0	1.47155950300316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92127001-1	4.53134900516476	-0.644717354692394	0.965916458221842	-0.667466993863275	0.504473885680038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	1.62438888480879
Merged-chr5-89931721-1	3.50825383297177	5.21710140903041	1.15264463523645	4.52620109402598	6.00534381830453e-06	0.000578802277693645	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.62509604098473
Merged-chr10-95532417-3	6.9345717518652	0	1.36331021991658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-109940566-1	2.65624938522922	0	1.40349098170811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62222929-2	4.53509779720946	-0.746080703144323	1.19451528134005	-0.624588663535007	0.532241061940813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.97908007631626
Merged-chr3-127892723-1	4.73544249789816	-2.68598008354979	1.23700588207901	-2.17135595106106	0.0299042759085028	0.422507479551452	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04181016172925	0.41385117919798
Merged-chr3-109425715-4	14.4161476053793	3.24238541978687	0.731117149774099	4.43483704463602	9.21419591774737e-06	0.000830344477477787	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	4.57348574263452
Merged-chr10-68268813-6	21.5681841289963	-0.576736577547167	0.439936605020976	-1.31095383054035	0.189873362456641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24137670046419	3.04102712221066
Merged-chrX-17518919-4	6.05463150703031	0	1.37155415784805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143679826-3	6.24921347014404	0	1.37360464509231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-17065342-2	3.93876385053521	0	1.41681487251008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8494597-3	4.73759878667954	0	1.36107023406184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41300422-2	4.5772830877914	0	1.419305128417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149709139-4	10.4480736555228	0.413087060917909	0.644961414160798	0.640483371327576	0.521858396444737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45135405799759	2.47585934352419
Merged-chrX-155265557-5	11.468376271603	-2.27482370636661	0.912578307125826	-2.49274356907649	0.0126760356247495	0.238085825148119	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99624464073807	0.67591700901439
Merged-chr5-123150249-3	9.52637689982701	-0.38882908329828	0.638401396205449	-0.609066780883337	0.542480175209231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94234074878519	2.35163392625407
Merged-chr10-68397004-3	3.88646751539828	0	1.37814411265358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124729526-4	6.864215229542	0	1.35726695233023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118099836-5	18.4935231896662	-1.91848125030802	0.46777995951333	-4.10124720243247	4.10929274773562e-05	0.00281331290269724	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10191015087632	2.61986479086169
Merged-chr1-171817174-4	7.77960690091954	1.26725977808594	1.31857595281615	0.961082124529408	0.336510876800505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr4-134490201-1	5.66735924647848	-0.0108455108427762	0.767983097845043	-0.0141220697085764	0.988732593129373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18458548845848	2.1985101063361
Merged-chr19-55642089-2	3.52770484101538	0	1.3733322161355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116837270-1	7.2128472207138	-1.72612610084841	0.629679515212208	-2.7412772039546	0.00612008504408182	0.142293286104039	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76921145748138	2.32656530541967
Merged-chr10-71383730-1	2.80226187987145	0	1.47277851236514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34171357-5	17.294704570189	-0.690748613514156	0.50984068740186	-1.35483226541648	0.175471004143694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51107848953465	3.68546728061074
Merged-chr16-76695083-4	7.48152313359787	0	1.3609780812955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35338388-4	8.31651335273159	-0.295436009778012	0.783444145561926	-0.377099007570106	0.70610002869923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	1.39020008251549
Merged-chr7-101538734-4	7.84725395743781	1.05450599614723	1.26365223425221	0.834490667261199	0.404004544281318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.577068348605183
Merged-chr5-21395358-3	4.22825579081471	0	1.37598255531648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71187966-3	4.40976389029118	0	1.39278180472368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90293690-3	6.82408708463178	0	1.35531876951477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21176110-4	8.42970482730463	0	1.37959049925724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41765043-3	9.89631193100834	0	1.3803481290281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52306057-3	5.15473870846555	0	1.38121304662062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118800315-5	22.5143101442237	0.685438148061231	0.397260785711637	1.72541104663368	0.0844534219424815	0.819932767167592	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96943603198239	4.6769115722881
Merged-chr3-148322166-7	23.1373816907484	0.0520077199480675	0.382141672528055	0.136095389974118	0.891745871888677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73500458021609	4.89105396820976
Merged-chr12-100615369-4	7.87779426676159	0	1.35514655242627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11462370-1	3.70915658622216	0	1.39765502570231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-106679880-3	6.42575359845658	-0.944825588394388	1.16669682757433	-0.809829568456761	0.418038135953442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	0.716426531808663
Merged-chr18-53152088-1	4.62968049465847	2.71545371349421	1.09287072504598	2.4846980079734	0.0129661377091938	0.241821525622666	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.70059870886137
Merged-chr17-86967898-1	2.91689465484192	0	1.41975796235463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53184889-1	2.36673223169278	0	1.46229300958962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125558797-10	28.5939160178541	-0.0612910399102035	0.322956342280192	-0.189781192954645	0.849480593906983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95048727893199	4.87981847947985
Merged-chrX-12948329-4	7.25314268455989	0	1.37006556777612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3497845-4	11.0189973298809	0	1.35716034698831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150504869-3	4.0656122050353	0	1.41462431862845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102002078-3	16.0242910039926	1.32730000577792	0.561265779647392	2.36483329985266	0.0180381881689332	0.299461479867578	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94449388822159	4.94747941703775
Merged-chr12-78901689-6	13.5999005847481	0.4265678244718	0.51031998578103	0.835883046631908	0.403220700752293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39265810110069	3.71778114674469
Merged-chr7-37490490-4	10.514042230276	0.337556728350353	0.823704015779314	0.409803426818294	0.68195015223148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.45526469271556
Merged-chr10-82083253-4	6.17065899519984	0	1.35216709462849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14873220-2	6.00596767155691	0	1.40043914960258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5491245-4	7.89357090347772	0	1.38668453955382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44504494-4	5.99086494314639	0	1.36464572633793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62844987-3	9.76822553506824	-0.4741323052161	0.684108367071566	-0.693066081395405	0.488268082409083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80820218063768	3.13740203858764
Merged-chr6-55123241-3	9.59263928664736	3.37625790509771	1.1111264794022	3.03859008644468	0.00237688027320765	0.0710697661008222	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.02640015751263
Merged-chr1-170901743-3	5.75739112747604	0	1.36090732257691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45591916-4	9.23726791561429	0	1.34869231022478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113810260-3	8.86895807890603	0	1.37359959547702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127034997-6	17.2226407396599	-0.584326785970446	0.597484597142709	-0.977977991005649	0.328085209551318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59697270205924	3.63104017508135
Merged-chr9-13555826-3	5.35341664649907	0	1.37478430829292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100754309-4	12.8608334139141	2.39741386706918	1.15643119014373	2.07311415283706	0.0381616571754555	0.493015457209347	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18984215491549
Merged-chr15-9463812-7	13.5702039532014	0	1.33936599667147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63558227-2	2.04720883189893	0	1.60084772716794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105340979-2	4.48925416947379	0	1.39430634919292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21823443-2	4.84037479449591	0	1.3790367365461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97487612-2	2.76750326829713	0	1.38465457859407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44187336-2	2.98111427501213	0	1.44729318108164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4135693-2	4.30869325158675	0	1.40227498556084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9565173-2	3.35475000852417	0	1.40298737085539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-98969759-2	3.98865788703032	0	1.39584833702299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14974792-2	3.63051781076365	0	1.48329727950879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65717582-3	5.66597917401984	0	1.36224835085866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21462794-7	20.1409642565629	-0.819432528862591	0.393307660882648	-2.08343902334281	0.0372112243579727	0.484842987745694	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63739618603374	3.71532717211161
Merged-chr16-65629405-3	7.57711532416	-1.06590316060227	0.827818308388599	-1.2876052024956	0.197883427430101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26292282237182	1.30139522650344
Merged-chr3-81123648-4	5.57827786318678	0	1.36006915467439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116712434-4	6.42677681831601	0	1.37448132093551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96738171-3	5.51974562062424	0	1.36925620289907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71433120-3	10.640788190996	6.73894879682975	1.01942181621991	6.61055972082123	3.82869618671319e-11	1.6133650853763e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	0	5.45508429010655
Merged-chr16-81324664-2	5.01210736801332	0	1.41368970871237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18608994-4	7.37367140254984	0	1.35770530633707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8762055-4	24.8229254240456	0.119174060193475	0.410883817252585	0.290043207324017	0.771783182947354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50737137228698	4.75054994905627
Merged-chr4-105149717-4	6.25672253952272	0	1.42637510332137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36683044-4	5.45859242281068	0	1.37537408465536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69196979-5	13.1736499345897	-0.197728241972233	0.655355266247116	-0.301711532898059	0.762871975780648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36276638555688	2.28733524435458
Merged-chr9-41135054-3	12.660993393519	0.418897579791698	0.559376358016911	0.748865363700326	0.45393835837608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84611264629958	3.37923037958809
Merged-chr12-51966680-2	4.62950855982334	0	1.39373877710007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116617854-4	9.2965140121688	0	1.35627537332943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97531204-4	12.9447587754569	-1.136979817743	0.463709027470808	-2.45192513060268	0.0142094223621081	0.257298464417666	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35872448200636	3.13379653042105
Merged-chr8-14813498-6	15.4314917719824	0.63833701137595	0.74759582981407	0.853853092699443	0.393186392631297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	2.34871576270704
Merged-chr12-102425536-7	17.7954403568795	-0.252005924909923	0.395961736877689	-0.63644009367442	0.524489615387758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49429033845999	4.33953975453765
Merged-chr9-32509990-2	4.514859943362	0	1.36480745994109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58566900-2	7.70776829254564	-0.0920869327425614	0.621394174825726	-0.148194071449717	0.882189610456609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14944349338947	3.18702340357023
Merged-chr11-117864929-4	8.03551804937473	0	1.36067168055958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-92490061-1	5.34684258983147	-0.966682386251741	0.787580605514053	-1.22740755610759	0.219669447829715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45613225885439	2.09319300160361
Merged-chr13-45977101-4	5.35812430177374	0	1.40856458218993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126563883-2	6.86471013238317	-0.187348006636768	0.789719334760727	-0.237233658073639	0.812475526123326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3356278069727	2.00101204725338
Merged-chr2-173785100-4	8.93404655814776	0	1.35286511178261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125620484-3	6.65221758394373	0	1.36044843960604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54985857-3	9.40206220628431	0	1.39457690242172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155757298-7	23.028185250965	2.48317128879832	0.673476547861172	3.6870939258158	0.000226829650906656	0.0115055049390388	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	4.04561850828843
Merged-chr19-34152103-2	3.64143107463049	0	1.4229390992496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87038753-2	5.65956131905415	0	1.41345359391195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117344602-2	5.02183458336798	0	1.37980022261472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93129442-2	4.52806779065307	0	1.3773603183692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88987726-2	7.02430677276631	2.8535969394848	0.799945404200849	3.56723961972825	0.000360761562046829	0.0168043168391633	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36759862365701	4.50197745134878
Merged-chr2-132107799-3	5.83086083447839	0	1.36293505421104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168904333-3	9.89986904439197	0.148438559843654	0.65844571446998	0.225437809953917	0.821638700482617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46688859312676	2.71942640836769
Merged-chr4-137374331-3	4.85818852960575	0	1.39280596670812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34794047-3	6.50342556015441	0	1.35640359591307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40245683-4	6.79670555095089	0	1.36626825523511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12140193-3	7.90322700782279	0	1.37768874257756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32559997-2	4.82655858882576	-1.37644460050407	0.897552159024581	-1.53355388504656	0.125139440587811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75122680664397	0.730937814817307
Merged-chr6-70871681-4	6.58006124978326	0	1.36834936591583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38509031-3	6.51014719002334	0	1.37024921339317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91853776-3	6.64016664543798	0	1.35745628265643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86147451-3	4.66687770140391	0	1.41927380032445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109505091-3	4.44575280476924	0	1.38829898428432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117313332-3	4.73525497335919	0	1.40667250515499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155097010-1	6.6571140901461	0.710863413916277	0.68953927823167	1.03092519361521	0.302575901159742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07721457594951	2.9912362415578
Merged-chr5-125307772-4	5.9781918165685	-1.1391312182529	1.26759749189795	-0.898653733171482	0.368837128179097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr18-67826195-4	11.8351505547668	4.55460198116813	1.0394354852202	4.38180343650984	1.17700975183479e-05	0.00100599171540861	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.50260334669578
Merged-chr3-95666224-3	7.10306721217509	0	1.39173358003743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28408079-3	7.78658419871543	0	1.37191344623925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148914111-4	8.11649918105833	0	1.39830339679318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128338635-4	14.1090212906828	-3.13714852219027	0.900012506601031	-3.48567214253273	0.000490902258181674	0.0211621060766074	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59196204118832	0.841757702988201
Merged-chr13-21914682-4	6.16077720467575	0	1.37206914136136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30198881-6	17.6936207255215	1.16814701577904	0.494131118224223	2.36404260467758	0.018076733611777	0.299674645441471	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72875668119007	3.90221733963705
Merged-chr7-98314203-3	5.17705907460187	0	1.37390674962307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6154623-1	3.11167878038947	-0.035384345218782	1.4448528503398	-0.0244899300371386	0.980461815973786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr19-12734228-2	5.08940478953139	0	1.39776813305776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138506836-3	5.57443019328969	0	1.36734353804822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142475958-1	2.41506749369224	0	1.44430387785948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41962985-4	5.69725358380914	0	1.38200749101418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48704530-1	2.93762152327051	0	1.44872126774603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110464092-3	5.31895789208487	0	1.36503515390076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100319887-1	2.33463922884665	0	1.40595846794864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47273549-2	3.46255394237266	0	1.53123903587805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36129959-3	5.9948949199474	0	1.3722561046561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12026800-2	2.99268290292804	0	1.46571576036302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21363842-1	2.22850621006392	-2.02537100774303	1.46418620952466	-1.38327420007634	0.166580805745641	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr11-21262535-2	5.16775200573416	0.584121057108076	1.36142880271547	0.429050021523713	0.6678868224317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.71701424649985
Merged-chr4-54338666-2	5.13002331650235	-4.41877980354924	1.17321425841576	-3.76638774363012	0.000165626502094749	0.00887023746538763	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73307160896138	0.41385117919798
Merged-chr2-164868174-1	6.37305400544021	0.219159154779591	0.81883216420316	0.267648444162992	0.788969937830858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17198420640041	2.67222574223349
Merged-chr12-111462389-1	2.27802329580629	0	1.49009633259575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64625654-2	3.39953541795062	0	1.44508709731257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103016277-2	2.49371391511775	0	1.45303105775314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83730719-3	6.3009260870172	0	1.39971548602455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27960651-1	2.31559722588207	0	1.48154961070482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99379419-1	2.71897458057671	-2.48588571960792	1.36626231455144	-1.81947909499653	0.0688383693273562	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0
Merged-chr3-95969495-1	1.98741829841244	0	1.48680226925274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84443917-1	1.89948036525449	0	1.46838311721554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54808347-3	5.36519547262508	0	1.36864464273637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105572012-1	1.74100313703494	0	1.67806624441451	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86190641-1	2.65229984512914	0	1.45602542460638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3776177-1	2.91044644730215	0	1.41035234891806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19712449-1	4.9042930659259	-0.631750616451288	0.755005419947152	-0.836749776571814	0.402733233307621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10080007254663	2.35237957254822
Merged-chr14-30325214-3	5.28848626213413	0	1.36245096573826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22814465-4	7.98517077244979	0	1.35539942271996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49364069-4	6.82660086921578	0	1.35766303218138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100531055-3	6.63949349062146	0	1.36715145635813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43581234-4	8.03518209510809	-2.98356829142773	1.14248819913143	-2.61146530327051	0.0090155135733609	0.187239355355487	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	0
Merged-chr13-81371203-4	8.90014379528167	0	1.35281709187423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95417461-3	4.51498586005778	0	1.43030301446644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41122899-3	5.61714176273481	0	1.36120632423633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121440837-8	30.9838100069035	-0.442965834988514	0.334670991763972	-1.32358598710258	0.185640581557066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13077418656547	4.68742646933099
Merged-chr8-70158644-6	17.3832614798617	0.686256656564696	0.461237095848199	1.48786093473833	0.136787571864186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70795950771182	3.9526862978513
Merged-chr3-116290276-4	7.8535085642869	0	1.36575126166523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35576324-4	7.92298193672498	0	1.36202036548657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26585549-5	17.7363757935092	-0.0604843296959335	0.747649219113121	-0.0808993417630816	0.935522003448221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	1.45526469271556
Merged-chr15-6337676-4	8.17651056081986	0	1.36535589470761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90244115-5	13.5497059062888	3.07667183484656	0.787936446675961	3.90472080308761	9.4334228909065e-05	0.00558596334342905	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	3.75872402691028
Merged-chr2-12024154-3	3.51177203808819	0	1.39850790191351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123855271-3	10.6491611368807	1.6979331351518	0.503015272986722	3.37551010145296	0.000736789872314764	0.0284656436881011	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53716753364998	4.63261406277074
Merged-chr19-32952579-4	6.99764434606748	0	1.36791879685721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106961493-1	5.42903138059377	-0.964933273803358	0.93389320136013	-1.03323728280495	0.301492869341094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0995156753045	1.18984215491549
Merged-chr1-105795876-4	7.08855990587982	0	1.38013087313933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126667501-7	20.3001464366015	-0.149975857661066	0.437720750332999	-0.342629079263368	0.731877522755383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0955931709266	3.98318312594167
Merged-chr2-175141986-2	5.02066117117693	0	1.4529310895943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-33932806-3	11.6473083573369	-0.0349474302106831	0.738369796454081	-0.0473305251359323	0.962249799797111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84022605426951	1.82011828833849
Merged-chr11-31713288-7	19.8298091280569	0.426748999697271	0.52774955360893	0.808620294946753	0.418733587390626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04543959052249	4.34195788333275
Merged-chr11-100725098-3	4.52942338559073	0	1.37769687730889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92755407-4	7.42781078750629	0	1.39766905044752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79075225-4	7.91057677258323	-0.0361751428852268	0.816499632314733	-0.0443051551446168	0.964661162500348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	1.46494528794689
Merged-chr7-135520411-2	4.89815750094555	0	1.37445012940394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78724649-2	5.21872712407984	-1.87350750954261	1.2578851034205	-1.48941068182466	0.136379257445895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr1-33983734-3	5.4035728669208	0	1.38702558987576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33517276-3	7.06733227456106	1.35139393881504	0.924121378402597	1.462355455028	0.143643829415936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	1.6227392896897
Merged-chr9-77748216-1	3.85794862622204	-2.70440667289151	1.29558743422942	-2.08739804156869	0.0368521688634149	0.482245317103123	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0
Merged-chr8-40294502-7	21.9230039464852	-0.565077586188264	0.425632973869784	-1.32761703363974	0.184304654458382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55188250933669	4.18758982687735
Merged-chr11-113173014-1	2.35648993463685	0	1.50758495068539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46412145-3	12.4732563715212	-1.57551835891153	0.461186707176698	-3.41622673506044	0.000634953553242407	0.0256620373239435	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12010665379862	3.67964392538846
Merged-chr13-95944126-5	8.19880964243342	0.716928811230466	0.813551173428146	0.88123382357064	0.378191275746685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.08188782053321
Merged-chr11-58283622-2	7.23768833528904	-0.175941805358913	0.739736419652028	-0.237843913973678	0.812002157378217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30279743853683	2.34876946313508
Merged-chr8-90833216-6	19.3577118211623	-0.249587797098172	0.512016079222736	-0.487460857629819	0.625931775074232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00719768790118	4.75330321448553
Merged-chr2-33427239-3	6.76877043813677	0	1.36707297750175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30689642-9	26.5606903106276	2.19624946969172	0.490245970621508	4.47989295436214	7.46804831200989e-06	0.000695129517452989	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03815873647658	5.02529787063522
Merged-chr16-30521873-7	20.9464542403519	-0.241903786288681	0.447513873886153	-0.540550361462583	0.588817539765852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80698405423482	4.67996352517076
Merged-chr5-114927893-3	14.0625288974642	0.00169607204551376	0.611687931646749	0.00277277343194871	0.997787649722903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91286313414378	4.26254213886564
Merged-chr3-95643464-2	2.14483765616804	0	1.57376372650649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57526702-1	2.13781867237248	0	1.51469967299667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160175228-2	3.67756444179475	0	1.39845356497734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64301111-2	2.4319693588335	0	1.50716042107085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30258757-2	2.15284681179423	0	2.20408257824977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69527599-2	3.54441037647143	0	1.5087526387316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120661966-3	6.0260136039945	0	1.36884324045457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74876733-4	5.63836404285468	0	1.36375330495893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114594869-4	8.60092712578277	0	1.35237371613378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24120993-2	2.99225992413488	0	1.42742495573899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83067677-4	6.70104560413311	0	1.36757839420973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45003756-2	3.41119705362114	0	1.39553315561919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119436403-8	22.975286434746	1.10922282583792	0.614635599493525	1.80468366419379	0.0711241975436157	0.739101558836438	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7337995627857	3.64186762932843
Merged-chr2-62685438-3	7.15994225288076	0	1.35892180436369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80575911-5	15.286549628138	-0.0132641905553209	0.582763416628821	-0.0227608497322151	0.981841037315558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19922831152576	3.33048108895377
Merged-chr17-86769866-4	12.4533088609354	-0.222468386323451	0.895594370195718	-0.248403064743288	0.803822562559112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.18984215491549
Merged-chr8-116243218-4	6.83817991337788	0	1.36499635971737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-31299350-2	3.67681163972125	0	1.42485012364421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17219538-2	15.3077724784336	-0.122197542721788	0.504221058057675	-0.242349145814157	0.808509635658034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0154100047305	3.8972873233833
Merged-chr4-136160328-3	4.27933808077992	0	1.40081252027579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141281550-2	9.60422705220513	0	1.36812138124644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107516873-4	6.13956457492693	0	1.36419176100722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58260762-1	3.52623474938008	0	1.38225139992614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56774484-4	5.1156965989205	-1.79655886706847	1.27746803619274	-1.40634349836477	0.159622149381615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr2-19038397-4	7.39637839705069	0	1.36570063228382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104376988-2	5.00023881048446	0	1.39613825348841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-18957985-3	6.82661305858102	-2.02733692315931	1.1667436634261	-1.73760268575713	0.0822808462753035	0.80794958433136	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	0.303163067301871
Merged-chr1-57862107-1	4.83842427077547	-0.0597011580049683	0.964726932563617	-0.0618839963826048	0.950655212105638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	1.7349297513737
Merged-chr7-90035232-1	2.71209207021801	0	1.41207721341501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69129853-5	15.9255114445276	2.02267040913982	0.575499613496789	3.51463382720605	0.000440360728266808	0.0196209580556192	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30302996175038	4.50870297544745
Merged-chr6-134706680-1	7.32281226125263	-1.09721629707908	0.884033663436531	-1.24114764228981	0.214551212446208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06559681884521	1.17858215524007
Merged-chr18-53153266-4	11.7529283154731	0.360255266854105	0.805091185176127	0.44747138397161	0.654534744864521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	2.11378131411959
Merged-chr17-43327461-5	10.9838718865987	-0.0352128904477199	0.577100614176479	-0.0610168999698062	0.951345749903172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27153531006637	3.23854075622283
Merged-chr1-43814411-6	14.4015844374054	0	1.35126637956444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61607009-7	91.5750290979823	-0.6412760302312	0.348386886796657	-1.84070082581924	0.0656654128589384	0.705157285183531	C57BL6J_F1_Control-BALBCJ_F1_Control	5.22931472280133	4.52078611925873
Merged-chr6-129559461-4	10.8094086851034	-0.218157806379942	0.545434620455608	-0.399970588954754	0.689178179326291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3949744081127	3.23588747797287
Merged-chr6-128134720-3	5.34610939299179	0	1.35356774504386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104367085-3	5.8890295033094	0	1.35577720617422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33606564-9	24.2634935010261	0.500863102836883	0.455856702080539	1.09872927292926	0.271886170195345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48260709252006	4.18766573835525
Merged-chr9-40787531-2	6.14353712841622	-0.122002498046189	0.869275332935083	-0.140349660715956	0.888383729006635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	1.38647389072186
Merged-chr1-53818315-4	10.3022885288748	0	1.34420477277373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-1165737-3	7.20530838155541	0	1.37181755155554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96866578-1	5.68501854662147	0.181959978586639	0.869805889084784	0.209196075664766	0.834295175818848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.39133106813974	1.78538701593332
Merged-chrX-47925049-2	4.87875104494339	0	1.3799218218974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83536739-4	5.56818219896879	-1.87544087597748	1.27337437516505	-1.47281185529935	0.14080177473925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr13-44734546-4	5.67584476863497	0	1.39919070576079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177703637-4	10.9345051516113	0	1.36566057828769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59831686-3	5.66698274152966	0	1.3596696369631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139449263-3	5.06229144846201	0	1.37890932485865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46304929-7	24.7663898069255	-0.482342839794001	0.399261507120034	-1.20808750954544	0.22701360364348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36379855533953	4.00115084514145
Merged-chr12-82265721-7	12.3407812958751	0	1.34634889792355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50394101-6	11.3592971995766	-0.830581152727822	0.664347692506911	-1.25022057289554	0.211218983565974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13234382969968	2.47175683101492
Merged-chr17-73009090-8	20.8769824398743	0.589176293477847	0.481099199186306	1.22464617375031	0.220708562714934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07511588449101	3.58429731488108
Merged-chr1-106037126-4	6.75192616663548	0	1.34990878123081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71261921-2	10.6175261489617	-0.870109598858419	0.661055887006424	-1.31624211501798	0.188092792392702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29901997744295	3.85766472215559
Merged-chr2-94144790-4	7.83876181972937	0	1.36372954175292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118470608-7	22.1974359383248	0.993854533985455	0.345275256622308	2.87844122891383	0.0039964573861921	0.104999239756412	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3471133078109	5.42243577499692
Merged-chr19-5692346-3	7.88684479539482	0	1.36146347507707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3719622-4	6.78243057465765	0	1.37143218979216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73908693-3	6.35669475758633	0	1.37552731333264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-22352968-3	14.0095828741065	-0.0947939116603098	0.494274084510593	-0.191784102446258	0.847911324215928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52820916273701	3.62673603290869
Merged-chr12-79627570-2	4.1289412103075	0	1.39142282358299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86942906-2	6.10439362556961	0	1.41746404278473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65380647-4	7.47795280648695	0	1.36540015702697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88349357-4	9.12514772123738	-0.153762809383675	0.794106690808891	-0.193629912911387	0.846465674323797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	1.79061031525623
Merged-chr8-123248732-8	21.8607892175478	0.363627980009612	0.375915905275638	0.967312036831706	0.33338806821532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41082348115342	4.69769958698682
Merged-chr17-52558796-2	3.13045230661087	1.40736374653853	1.88331648089346	0.747279472577476	0.454894880750672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	2.07889089756556
Merged-chr13-24338042-3	5.06938329110175	0	1.36946809099114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11378845-1	2.28114448000159	0	1.6329231630371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145857666-1	2.55430085048721	0	1.43293955181115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133592052-1	2.31839964930878	2.05969108993009	1.41242919384522	1.45826148234925	0.144768482749377	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	2.95515850342639
Merged-chr17-29416566-2	4.27722356971486	0	1.39846953487247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100615761-2	5.70380305596497	-0.557752129466697	0.907331638085323	-0.614716941474323	0.538741669613433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68884729081939	1.70869404742316
Merged-chr5-113122552-1	1.49774077023753	0	1.78849621096353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11000598-1	3.96021253204821	-1.84720106681071	1.34040077844788	-1.37809608626883	0.16817362376659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr1-152038502-4	8.60003864827577	0	1.35123291274623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3441774-1	6.58499357624987	0.346430574757059	0.699914929599519	0.494960973264682	0.620627669137099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51388403976045	3.83696906467505
Merged-chr11-20762228-2	3.76501468293237	0	1.39713686970798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75264414-3	4.02037052279002	0	1.39507962271104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32508327-1	2.84506010164861	0	1.40810411025313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10978894-2	4.62512560229878	0	1.85340989003693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121686325-2	2.34733884398599	0	1.50827360131751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115372382-2	3.11794244803847	0	1.42591502374883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96301417-7	27.6843662816951	0.0644226938279896	0.335016005178342	0.192297361416195	0.847509285115791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87426105719226	4.88999203753266
Merged-chr8-68348644-4	6.2463277704232	0	1.37486705804243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29430700-4	6.3927210886146	0	1.35426998816938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15804591-3	7.35213672746085	2.46757656789998	1.17745781156659	2.09568151288317	0.0361104528967487	0.476098120924151	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.837303648891292
Merged-chr5-143043503-3	4.46460926128402	0	1.37399239703674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85072623-9	46.2975452774875	-0.277568573248439	0.319335670619351	-0.869206289137996	0.384734308101623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70721260093139	4.47415649087706
Merged-chr2-70946919-2	5.68147590090338	0	1.39477526797409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87466214-4	6.08682450503366	0	1.34884718390143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19055664-4	8.20402608849435	0	1.35357938273356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163583935-3	4.32554008002732	0	1.36856204304764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71087695-7	14.5547780413404	0	1.3414652472623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53825610-2	3.89311507159213	0	1.3987140400405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121694118-2	5.44148872102886	0	1.36957761241954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125199353-5	20.3522943019092	-0.351991210222194	0.501816739512809	-0.701433775533129	0.483032349835814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.96814161345766	4.71023538956494
Merged-chr2-157095412-6	13.7602832454104	0	1.34756417998076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105823704-7	15.9620702974387	0.725433140837977	0.528570853254497	1.37244257107891	0.169925705215343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27312904655309	3.53458122118682
Merged-chr9-56259661-3	6.12448266419902	0	1.36804471396671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70815895-7	16.2849413257226	0.267750458964634	0.445999160536088	0.600338481899381	0.548280677416414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44882099460135	4.40439655976875
Merged-chr17-31305039-4	7.59366790465566	0	1.3582876702328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100534553-6	18.5758800891352	0.847998076544954	0.565008901243143	1.50085790627223	0.133392317576306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44404647592357	4.14838698964651
Merged-chr13-101742870-3	5.53839830117615	0	1.36538553960726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25609558-2	8.17318626037777	0	1.36264839527375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99094777-2	3.41587679525715	0	1.40640509107071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70273177-7	17.2759276095624	-0.382375066834869	0.421703276771648	-0.906739615025388	0.364544509075984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68700213047576	4.3041566460683
Merged-chr18-69300661-6	14.6593989189399	-0.622805381910071	0.620503939315166	-1.00370898949883	0.315518902797974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8948257788451	2.95487726357169
Merged-chr17-28012972-3	5.43167596240058	0	1.36310202262072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44258431-3	5.6620896139369	0	1.37407485524848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127634633-6	15.7571612133727	0.0986547729496307	0.502225570332205	0.196435185258238	0.844269558836867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35944826533734	3.53553745795145
Merged-chr10-86977486-2	3.55655480267072	0	1.43560083430422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72295245-5	12.4967560409899	-0.355995253983662	0.491099630439528	-0.724894159796151	0.468516964009112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88751210489832	3.25452732946691
Merged-chr7-125583430-4	23.6985206211917	-0.916348422868244	0.41394511943017	-2.21369543897431	0.0268497369099333	0.394253065555663	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05139022484406	3.92654421872229
Merged-chr4-95156959-1	3.98744511082418	0	1.39101046956263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106146559-1	2.08875345660564	0	1.45499956618273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35955972-4	14.6820336865611	-0.393455997536811	0.513910053551454	-0.765612571339622	0.443906862094779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08803418449587	3.6614644492266
Merged-chr1-150015647-3	7.33784546059584	0	1.36748581619129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146343820-3	6.42635510706461	-0.00641214698118688	0.953104897141349	-0.00672764036825208	0.994632160111998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	1.36166747209511
Merged-chr8-25109436-3	4.56949466575219	0	1.39112533189902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101636923-2	3.5348761397138	0	1.40718550058741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8198620-2	3.71268401060269	0	1.40418895950883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34081304-2	3.54947679802278	0	1.41806206089428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88117257-2	4.57582651061855	0	1.41513628475251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50869658-8	24.244830040929	-0.371454254071243	0.335864249373338	-1.1059654451592	0.268741476045195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7194253761381	4.44099146755836
Merged-chr5-102001152-8	22.5138402682524	-0.116996099796542	0.392831884687868	-0.297827402400148	0.765834899005839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65673306264789	4.56882031290561
Merged-chr9-82871585-2	4.43506811459827	0	1.41550719818744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-100480522-4	5.54582098914087	0	1.38183823081158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108615977-3	7.35750792357714	0	1.38381105995879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121389181-11	56.2309054737181	-0.261016473420454	0.270045892675337	-0.966563389780053	0.333762343664507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.55557858655045	5.30891628596532
Merged-chr4-135256753-2	4.95080678411113	0	1.37964865158112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21495945-6	21.4579771923473	0.808551559788823	0.553079815424806	1.46190755337509	0.143766544842864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95990202131671	4.8933401234525
Merged-chr8-41395540-3	9.83593250637155	-5.5116778506278	1.03961679828558	-5.30164370152254	1.14764658950278e-07	1.91953602950097e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21373065896852	0
Merged-chr13-30630230-4	7.44667487993918	0	1.37215058397512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101296928-3	9.07513245568855	-0.177611547330803	0.564249096643406	-0.314775067230723	0.752932443589913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47935912293436	3.27362038848848
Merged-chr1-16685388-5	16.2050532434811	-0.300989894627006	0.482838688950181	-0.623375677043273	0.533037677743433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94267606351727	3.75343372762683
Merged-chr18-54983277-2	4.0051194101983	0	1.37509958476145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88368098-6	16.0661204867909	0.401539512626144	0.493269519250628	0.814036742501665	0.415623902452964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30895033782959	3.7757289446291
Merged-chr15-39616889-2	4.32756035591833	0	1.40824008605591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130804037-1	3.47470225024708	0	1.39670131655733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44404311-3	11.9315474420785	0.269278415999913	0.507101193708913	0.531015149127187	0.595408281350037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80950514011689	3.57171978451994
Merged-chr13-75825567-2	4.21171153410382	0	1.41941717073096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84603949-2	6.44894781012652	0	1.40087242720539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90965881-2	3.45988572688924	0	1.38861730846488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79259072-2	3.31464499100029	0	1.43458591890294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88680904-2	2.3487367692087	0	1.52724621925086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85989228-2	5.43579319638828	0	1.37470286326851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50513014-4	6.73388811941061	0	1.36833937604572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45919807-4	11.5689038387026	0.404873114510921	0.494081381298824	0.819446208328281	0.41253188037075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30700645782444	4.87116437867127
Merged-chr16-65351286-5	13.1133515077197	2.67949330388296	0.996752610907058	2.68822300996492	0.00718334044575676	0.159379266649344	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	2.45989369800074
Merged-chr6-99242303-4	8.58715508137179	0	1.35585600918979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60541350-6	13.7711957930396	-0.53776175552114	1.18102837556555	-0.455333476017142	0.648869346262048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.465515277017237
Merged-chr15-3999349-4	5.4965790806524	0	1.35746832560763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67985238-3	8.24764491628281	0	1.36169906145802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51729322-2	5.89812180071224	0	1.36319355644687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78915909-3	10.8119611191772	-2.11742676243515	0.698653030470929	-3.03072722808901	0.002439655385189	0.0725316888697277	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5388097093617	2.10921814850263
Merged-chr12-27312341-2	5.32295792297174	-4.98700380096011	1.11654408335081	-4.46646386409915	7.95230870698648e-06	0.000733921135828655	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8171813304822	0
Merged-chr12-31944038-4	5.84048836203232	0	1.37408346857129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25251935-6	16.0746325701811	0.0967404776626488	0.518479539277627	0.186584947590088	0.851986069565477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69150946212828	3.06509110543225
Merged-chr14-79533475-3	4.58685658106339	0	1.36608922235272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13874987-4	5.52547090212952	0	1.37846940971521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-121885668-2	6.2234884653457	0.174545484151809	0.899808882967107	0.193980619057958	0.846191057410086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	1.68067998093129
Merged-chr19-55233762-4	8.5014204172478	0	1.34518199561463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24894761-4	6.93144183479363	0	1.35349093760004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7333542-3	9.92530825870987	-1.59355544243614	0.618151844203723	-2.57793527169508	0.00993926141915998	0.200552454151491	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73310179926666	2.09567886606908
Merged-chr3-19011650-4	10.1069941986235	6.1451230152611	1.0435478284945	5.88868363046331	3.89283842043654e-09	9.84236296262837e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	0	4.99909829768585
Merged-chr1-131126622-3	5.03588781679261	0	1.37608497486474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6178820-1	2.50357325587752	0	1.42136487162844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62045860-13	42.839431558988	0.809532328214269	0.299773340748187	2.70048139101964	0.00692392103505504	0.15514320838605	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9837785845541	5.740970163479
Merged-chr13-93861451-6	16.0303462090947	0.187589867415771	0.561975441512366	0.333804386381968	0.738527173248041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95569619829633	2.61279751490361
Merged-chr5-64811278-1	4.79051725775141	0	1.41680761766516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133538292-1	4.83622380621749	-0.445922182907277	0.81446963023892	-0.547500074099103	0.584035219580351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17543988140679	1.6044622311735
Merged-chr11-3135751-3	6.84533815408665	0	1.38020190569322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24878014-3	7.2725929031085	0	1.37821359314021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95132154-4	5.40551590716137	0	1.36224614754372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125577682-4	21.7716042650647	-0.137443051334756	0.590285504017285	-0.232841651030501	0.815884368812405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24253549330999	4.25160574381766
Merged-chr6-120908296-1	2.78413578738201	0	1.44933492736336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70707451-4	7.63577737720329	0	1.35965063450393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43787673-1	3.91676332416505	-0.0350611922360153	0.932582427415252	-0.0375958105206754	0.970009948282337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.30064958020929
Merged-chr1-65060287-2	3.71054029171712	0	1.41657882336323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30084306-2	3.9034344043472	0	1.41978719006986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76525295-2	4.69438969094647	0	1.37288759753095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45379760-4	12.7971328650859	-1.34884843178615	0.862542514261682	-1.56380515682839	0.117863332888092	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47555738456387	0.838451940269823
Merged-chr13-64439286-8	23.8585836719623	0.236206897101341	0.325730317989735	0.725160920110559	0.468353314543504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25479734175782	5.44405691270958
Merged-chr5-63837250-3	7.57995958655593	0	1.37684456818163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68317132-3	5.91185241500102	0	1.37942845630642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121429441-5	20.7508015367198	-0.220189365962382	0.492134998173309	-0.447416596624247	0.654574294831717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97370322637382	3.81721873184808
Merged-chr3-88649557-6	20.3509645680626	0.206991058702435	0.475781149537221	0.435055190613939	0.663522367489549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88892965543954	5.28848411347866
Merged-chr15-26359005-2	3.21366290284497	0	1.45529053435909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35850535-5	22.1336504173495	1.38995338951684	0.497190566086422	2.79561497004598	0.00518010733650135	0.126783185369148	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51029633707071	4.4766943857171
Merged-chr15-60854376-4	6.35119523646975	0	1.35984199906818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25197912-3	7.44881808746741	0.0949444882600118	0.710320051730983	0.133664378513096	0.893667974167382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	2.29256834160685
Merged-chr18-55357512-5	12.5266339042776	0.75844655387346	0.611546556408219	1.24021065269017	0.214897489253443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	3.11098140107769
Merged-chr19-10022634-4	9.57051691738043	0	1.39225871620565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123529813-2	2.81640524549861	0	1.51888615818685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37051922-1	3.10246238866667	0	1.42731810172659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110893627-5	13.0020905846425	-0.365865613398501	0.741120588889352	-0.493665428924042	0.621542484311973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71013794855404	3.54928883663556
Merged-chr2-121419153-1	2.40647008847357	0	1.4513979227682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155193398-1	2.37649246805313	0	1.44772410277867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84699627-3	4.62337136666916	0	1.40058878495826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113812235-2	5.23696688657902	0	1.43913011303926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113956047-1	1.69031338796618	0	1.58442313565153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94223869-6	20.396603830555	-0.363663917492384	0.462121930532667	-0.786943647260378	0.431314855258922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17885666019522	4.57701215809895
Merged-chr13-60673532-1	9.42066387112262	1.26030870341257	0.758293865629072	1.66203204395836	0.0965063496618589	0.890206798111147	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78348390616087	3.80339681423526
Merged-chr5-99423184-2	2.96011567492682	0	1.45810715083745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108417713-2	3.63467722300967	0	1.423511374875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132803692-1	1.75490289441649	0	1.45964392104816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120083304-2	4.51850819811575	0	1.3836880196219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160237527-1	3.23958117519583	0	1.44885757621671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17327170-1	3.62240967950052	0.997926540031118	1.07764261723588	0.926027352732919	0.354431765581209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	2.1893145161846
Merged-chr9-64031987-1	2.30178490375548	0	1.53904137372371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49078920-2	3.41795513832549	0	1.44295932498447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80011026-1	1.16936392793394	0	2.18015199720138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4799376-1	1.72581291739166	0	1.49968898190877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55652129-1	5.28460156768945	0	1.38362557357471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150251929-1	1.53485735261292	0	1.6262405520337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110861311-1	1.77076626278545	-0.75450573596165	1.57714908541168	-0.478398486827072	0.632366610418262	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.723581231604105
Merged-chr16-77282173-1	2.73746613977163	0	1.46698016625772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144283520-1	3.003236894945	0	1.42839649689996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8901669-3	6.8357318415649	0	1.39526887842449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24645343-4	6.47681797697876	0	1.35125690265882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-143321537-6	15.216929776956	-1.7342655664164	0.584726593679982	-2.965942690415	0.00301756714084586	0.0854778177223764	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25790140270716	2.78597213134036
Merged-chr3-10273329-4	8.06155669653805	0	1.37245161105039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72201609-4	21.5113075683656	2.52807413544678	0.416349708775508	6.07199688666023	1.26329382758704e-09	3.55810306600021e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76632717035731	5.63451110377958
Merged-chr4-98189128-3	5.81012806105876	0	1.39690060450792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43681176-3	4.00514720743179	0	1.40500739450679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99955775-3	4.67271856113416	0	1.3762819329671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53020300-4	6.70405518951345	0	1.36560433164415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130811913-4	5.5131274135944	0	1.36142021761085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101801461-4	7.74888108722895	0	1.37348654946687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32779351-4	6.70538321197717	0	1.35288682058841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133108033-10	27.9847433644695	-0.83185823540595	0.385014599425644	-2.16058881052016	0.0307271165362927	0.429559968816266	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24512465932053	4.32557490733604
Merged-chr7-100505251-5	15.4818780394837	1.44685944675831	0.442249747633174	3.27158908399968	0.0010694488991741	0.0378406665124932	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69356658215259	5.0259757903676
Merged-chr9-66082207-7	21.4393715831335	-0.0954784926226066	0.451629502002469	-0.211408892021595	0.832568218717597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16888495999377	4.04201602150212
Merged-chr11-22632114-3	4.94569570652117	0	1.3684803187731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14045898-3	11.1691189513104	1.48228608719892	0.607676396441721	2.4392688211662	0.0147170157686154	0.263460932552523	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04155727848712	3.82910097990515
Merged-chr12-100422771-1	3.15757792458748	0	1.44011391930709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25324185-4	7.99885080625228	0.669433621283491	0.812341552028998	0.824079009145152	0.409894666315988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961371261847668	2.83951092692549
Merged-chr14-76467111-6	17.5044214274827	0.445798836002383	0.413994620037693	1.07682277601046	0.281559448087537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27355692396087	4.5432811810465
Merged-chr4-134760992-5	12.4669551186608	0	1.35547881236736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97171917-5	13.4301943768651	0.635024399040493	0.578271281346954	1.0981427221517	0.272142172659895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21033636647571	3.50669182356504
Merged-chr9-104039930-3	4.21330933706654	0	1.39367409161301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121930202-3	4.84898144475777	0	1.36524036957084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65414470-4	5.69950564421541	0	1.40703222208025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27560968-2	4.33463530766646	0	1.37862294807396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45520608-4	12.0765987934183	0	1.34976485816513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-16021328-2	3.22044509038908	0	1.38332985605091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62421272-2	2.62916959629921	0	1.45870681486422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123366206-6	19.2305272855927	0	1.34278864904938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86583750-4	5.08033526993366	0	1.38098955919846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3138490-3	10.029414860434	0	1.38478988732008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25278368-4	7.69343807317416	0	1.35544922276402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85943039-4	15.0355117843131	0	1.35549956130412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108865295-7	21.9725920489759	0.76250221754657	0.46218922252295	1.64976200306944	0.098991623102087	0.905601757018908	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74285897538764	4.37011705658608
Merged-chr2-60323600-3	5.16560561669566	0	1.36291407193859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29852692-3	4.87147162793911	0	1.42304611049015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51187285-3	14.4073758180386	2.59107579344066	0.676925663160635	3.82771097987726	0.000129340504546632	0.00727828207727783	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	4.1626406831674
Merged-chr1-154105028-3	5.80260478437004	0	1.37261016051677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135128996-3	3.85827507672923	0	1.386265610183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27693286-1	2.98771456030742	0	1.46521110456202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108995419-4	5.48311598555388	0	1.35644383705079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56930234-4	6.23937322290553	0	1.38054408063618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33158578-2	4.24447148609342	0	1.38420697949619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159646103-3	5.11032434687123	0	1.36112391295523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125069705-2	9.14440061209302	0.902235802852793	0.698962254324304	1.29082192531984	0.196765433203183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63929222501099	3.67139022072898
Merged-chr12-69458169-4	5.47576091853063	-1.86947772328835	1.25778878824634	-1.48632086782619	0.137194269596323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr6-86790540-6	24.2518841556765	-0.784412539871928	0.439722516977112	-1.78388076477047	0.0744430421297474	0.760505417615286	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01687965443487	3.88796074023634
Merged-chrX-20368118-4	6.29850444061815	0	1.37218743145678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115052816-3	7.52742072276143	0	1.38193097009436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93953726-4	5.36189652311757	0	1.39871987696216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134005774-6	16.7440578069927	0.184520480533809	0.452147059885297	0.40809837529546	0.683201452788064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93426342753415	4.39238769501379
Merged-chr4-125115778-4	8.60936447462869	0	1.34978832164512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98317583-2	2.76518198546536	0	1.48328469039391	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114527262-2	5.18265219325992	-0.605467793083713	1.38702140780273	-0.436523754916568	0.662456767936958	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.376242425970964
Merged-chr8-115310557-2	1.58639059103102	0	1.694513542325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96613315-2	1.92653772053646	0	1.74382699934556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58210172-2	4.91531650670118	0	1.36371799734892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89378570-2	6.07831683942709	0	1.38215576161503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100398808-2	4.69962591789234	0.423718713674159	0.964302816778004	0.439404206128856	0.660368679348276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	2.13455945753842
Merged-chr3-135672513-2	2.36225479319657	0	1.42399281478147	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142764714-4	10.1226103028648	0	1.37242886499047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83650651-2	2.89512161102841	0	1.42923924592122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59264197-3	5.95315960647864	-0.693479118125897	1.3912112415291	-0.498471473939275	0.618151770472793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr13-101678751-3	5.40200214221412	1.75043035876281	1.2610780335995	1.38804285866953	0.165123994764746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.841757702988201
Merged-chr10-78095319-3	5.18754177467489	0	1.37158166754236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120023954-4	7.89110374824571	0	1.35488638171788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117904162-3	5.8219509403049	0	1.37828037318434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69391746-3	6.43777190748072	0	1.3724654593813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81110902-6	18.2604198844907	-0.329696745189998	0.511230110061737	-0.644908699040014	0.518986354066796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76057353276993	4.47064941518362
Merged-chr11-11540723-3	5.93629222282137	1.71100130154906	1.28726846544781	1.3291720782998	0.183791204680663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr8-91322897-3	7.3467254732238	2.26163603994552	1.02954459501529	2.19673441140442	0.0280394197290148	0.40580266694609	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.5113429088692
Merged-chr9-47712720-11	40.6289231574908	-0.06457752941089	0.267532573607084	-0.241381931703512	0.809259115206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.66589769045636	5.60228655626643
Merged-chr6-43408923-7	12.5026349216177	0	1.35464305384511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-114210572-2	7.69320829099316	-3.64585505354794	0.986941988277437	-3.69409255746759	0.000220673417707384	0.0112389024065173	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24069722184058	0.903978167044898
Merged-chr16-50457193-3	5.82964434826195	0	1.36383564860345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5213608-3	4.7719945916959	0	1.36946428523845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101657933-3	6.43860336796379	0	1.35979056890573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18912454-3	7.47930533880718	-2.5556985634108	0.871495251663559	-2.93254444993514	0.00336196792852513	0.0930041804716017	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4198149604239	1.06702908365212
Merged-chr5-29553184-2	3.29487433248264	0	1.42835653151449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86611009-1	2.1416950561265	0	1.55336136741469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153434024-4	5.69722431172331	0	1.35920235240665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58567365-5	13.8623883020091	-0.673962841757859	0.663534331759373	-1.01571660952469	0.309764356250558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89652747650631	2.47585934352419
Merged-chr14-14600121-9	26.2788423737109	0.198008672051075	0.411401085104697	0.481303232344863	0.630301000096586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32553612437523	4.41561518199654
Merged-chr15-67405630-5	10.4820042389093	-0.696927797599123	1.36167353175094	-0.511817099582573	0.608779021732101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr2-11203551-2	5.47102940483259	0	1.38794526960618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57052328-1	2.89476075370982	0	1.40447370469471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78541079-3	5.12195160904752	0	1.36586255045103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30114306-3	3.43436949086522	0	1.47935347553051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50228825-3	6.22840731215085	0	1.35374025303503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5127431-4	6.50306049069315	0	1.35190964148214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120099133-5	12.3499089542192	-0.0637105560695874	0.568590472334935	-0.112049988822285	0.910783770750722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35361843215478	3.20368282600622
Merged-chr16-30188209-3	8.75037214995494	0	1.37362792307275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70832401-3	6.22456974969384	0	1.37190617384752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21543407-6	23.1148401868768	-1.60064062624744	0.394638865567874	-4.05596297248667	4.99281692246592e-05	0.00330577996453502	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29840065011915	3.46080731589141
Merged-chr9-13668983-4	7.94530967747639	0	1.38150005010175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142697764-3	6.10513560403892	0	1.40383790084315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68879816-3	6.82338122406811	0	1.37418032503233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65372812-4	9.03014113500399	0	1.38302144035336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86337284-2	6.02096053464105	-0.377142209408544	0.836380171054262	-0.450921987943777	0.652045775536919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35275353596673	2.01976648022517
Merged-chr11-31812331-7	22.6746593558034	0.373986482947258	0.373322409530581	1.00177882012899	0.316450428715729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66616829530064	5.01244663309592
Merged-chr1-153918686-3	4.66044015591539	0	1.36151359464773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14477703-6	19.6610817519683	0.193827961852619	0.510011518663039	0.380046243584314	0.703911088481864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13787948945653	3.33555296929498
Merged-chr7-97148598-3	4.87073484103556	0	1.36318464841418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5920534-3	4.98008001526417	0	1.40909311307784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87102791-2	13.2133099898257	0.354693197570089	0.680413693140921	0.521290504799744	0.602164414552973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01807112714131	3.30085144834262
Merged-chr10-24622728-4	5.41072637924586	0	1.36015803370157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46536808-2	3.41943002837593	0	1.46494077472814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35145310-3	5.44872246597563	-0.696343844400203	1.36395443882125	-0.510533068100129	0.609678053720847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr10-93444601-7	25.804707593393	1.01049848739459	0.480929973681479	2.10113434947568	0.035629174365856	0.473536990061997	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65705268498327	4.82865505391213
Merged-chr7-88319645-5	11.6780177903722	0.543219472143573	0.631091675343147	0.860761587210298	0.389369365332212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69973550690885	2.35355458209615
Merged-chr8-46680825-1	1.87756189309097	0	1.63170344692832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71903458-1	1.97406258404968	0	1.75803477997667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39544401-3	5.01365463042205	0	1.42551882630326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78305257-2	2.90775591099873	0	1.45378741747843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5737354-4	9.89364204382226	0	1.39867193405527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91037492-1	3.63184865259108	0	1.39304747109287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44427594-2	2.66197899418147	0	1.44172130868737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54365454-1	3.56985926746161	0.148541992804897	1.06941339481408	0.13890044161147	0.889528821995656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	1.45881469756713
Merged-chr19-24164613-1	2.71691093799564	0.227664247577268	1.37907702535387	0.16508450463008	0.86887746918357	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	0.662147012823607
Merged-chr12-55481103-2	3.4541271790166	0	1.46617619102142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120954152-4	7.41286661235888	0	1.35669095544762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100667010-1	2.30542940487307	0	1.51570867711406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125645031-1	2.53121075087317	0	1.4080533454362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139225395-2	5.85825829809502	1.58540842970136	0.806006111610319	1.96699306229065	0.049184010605546	0.583371946870364	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98077727572561	3.74143106354921
Merged-chr9-57524616-1	1.7507068930169	0	1.53868610267501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134273567-3	6.79539956761017	-1.45516627124515	1.01243507965337	-1.43729341316715	0.15063463967449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99252275576001	1.55145391112725
Merged-chr7-143045542-1	5.33784657359545	0.337158279079939	0.815845823495421	0.413262248050022	0.679414485934104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60588664266147	2.76917787882407
Merged-chr3-9752470-1	2.46303769047536	0	1.50350369738908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120443520-3	6.5698133695645	0	1.36089723594507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116063267-2	5.36361962065829	0	1.41022386939441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121971862-1	4.17151737053108	-1.11350689853386	0.877364267628528	-1.26915004362283	0.204387554566461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16596752412581	1.27743081564928
Merged-chr17-10498165-1	1.69521234143996	0	1.46456767275888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178492700-3	5.58324381872569	0	1.396066159386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32551790-1	2.81997525237036	-0.037027764822903	1.05175203954112	-0.0352057932200999	0.971915642774823	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.40024388691264
Merged-chr9-61119432-3	4.38829524943417	0	1.39305376666656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165299966-1	2.61075193538174	0	1.48517938730794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26652088-1	3.11451852993343	0	1.44476280051284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65374941-4	10.961718857039	-2.27422406350569	0.888606732447644	-2.55931446438786	0.0104878822608435	0.207463898041191	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94283950978213	0.724326877898254
Merged-chr18-39635818-4	8.90745256524497	0	1.34812989855245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33484774-4	6.32450693345231	0	1.35967537688456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69208763-5	11.018682862434	1.94983611607289	1.13120459568896	1.7236812186794	0.0847654073593153	0.821563111383319	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.25298535761957
Merged-chr8-68999507-8	24.999393238964	0.0297457550483698	0.398752125481089	0.0745971071940543	0.940535275836753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6223920231799	4.46874173103811
Merged-chr4-135982177-4	10.6235604895844	-0.401188389990853	0.597701194256753	-0.6712189867543	0.502081034922611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21282271434453	2.86523152519899
Merged-chr8-94804717-4	5.14136844959287	0	1.36850617172702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108780432-7	19.9764803979416	-1.21606775642581	0.449430618838792	-2.70579641317675	0.00681408061688387	0.15318718290041	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88795379322235	3.17807849303726
Merged-chr1-119925557-5	15.4795556204449	-0.416998864039475	0.736971767538056	-0.565827460979287	0.57151107677901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.993458951033742	1.70113659014892
Merged-chr10-100160410-4	7.79173268169163	0	1.36278604152476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75760870-4	9.0170191928633	0	1.34594973896994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86167278-2	4.08634618390317	0	1.38072504649873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61774904-2	4.05698873495458	0	1.43273774599685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66219952-4	8.44960510795255	0	1.36169149517476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59565777-4	5.02902659507652	0	1.36667542435387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9707408-11	66.0073107461751	0.182834568818416	0.382008646565764	0.478613692287042	0.632213475736586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65466215555644	4.05538868126279
Merged-chr15-27673291-4	7.2782557129607	0	1.3480612967239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88829775-4	8.03875861954187	0	1.359821835956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10459536-15	45.3321900021657	0.326423395358981	0.294866861561175	1.10701960074703	0.268285454005592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.71377337231484	6.06355934916566
Merged-chr7-43512216-2	5.21916920630284	0	1.39412487185059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-54861421-1	1.90684578850477	0	1.52873272975871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66895852-4	4.72184024308729	0	1.41348108616627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70684000-6	22.6216490706325	-0.192941846440167	0.409934622027152	-0.470664920874596	0.63788003867112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10270484105892	5.08206437839571
Merged-chrY-1291701-1	3.09498602841664	0	1.39852977825069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10451300-3	5.26931695249709	0	1.36737227618262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23449308-3	3.1184019635739	0	1.41411822462837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68548572-3	5.93077496579183	0	1.41827200612876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126603930-4	8.82620452547516	-1.34614549118343	1.36360394395124	-0.987196830248805	0.323546155419006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr4-3776413-6	18.1658388016144	0.766887559107707	0.566837202305807	1.35292383066624	0.176079965354152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48475512893435	3.44145645879699
Merged-chr8-124278656-5	45.1136274176055	-1.04697169261343	0.436738179222598	-2.39725250143476	0.0165185361881766	0.284065519978833	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55325136182033	2.93185576084276
Merged-chr19-21373544-4	6.62403761083537	0	1.3614592483878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10962572-7	20.6693732013793	0.512626498427522	0.459376660568334	1.11591759536348	0.264457409388757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67340829073946	4.37465005435746
Merged-chr14-51931015-3	13.1717645205285	-0.422560289447313	0.585512553381179	-0.721692962870121	0.470483269575493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26558851390608	2.44305708668716
Merged-chr12-4572058-4	5.58191331037364	0	1.38702257170556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116241596-2	4.83060364192056	0	1.40859436764683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96566908-2	5.38417300828113	0	1.37614423769678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-94658393-2	4.85429891486982	0	1.45758981519945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133757561-4	18.7560385039186	0.0948365361250809	0.571901190047037	0.165826785772698	0.868293265959001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39855328800337	2.47474357871008
Merged-chr7-25781577-4	8.24804835698821	0	1.36754862155882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-143348559-4	4.81236894689515	0	1.38715673776852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49108599-3	5.11809961628999	0	1.37554051555352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87205665-3	7.67932605213955	-1.20427942890261	0.862739532327861	-1.39587834308833	0.162751133314232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35966138218825	1.25163494309627
Merged-chr3-90111826-6	15.058204444443	-1.90222056928312	0.584963279735134	-3.25186321121631	0.00114651184565066	0.0399507932164897	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3002170930604	2.13831403070989
Merged-chr1-152291072-3	5.56524520363658	0	1.37017929070386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133177061-6	17.3128401404432	-0.720485694944127	0.440932375990749	-1.63400497258846	0.102257806484061	0.924897188463735	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71108289404269	3.82366934202483
Merged-chr17-43140105-3	6.41774778545694	-0.0262469334980963	0.854295547415549	-0.0307234815603332	0.975490064422935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57481894122996	0.948404007588321
Merged-chr6-125274964-2	4.07457331052653	1.83222941208841	1.14307290836484	1.60289811671717	0.108957149556968	0.960609324272758	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	1.86501351763573
Merged-chr13-93995594-2	3.54987836427697	0	1.41815135168644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21852324-5	19.6617274236698	-0.951415740747685	0.510466192731025	-1.86381733853432	0.0623473600282522	0.683707916839976	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51464646192394	3.65868901721722
Merged-chr16-93189657-2	2.47852150651366	0	1.54887061235835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97379523-2	2.50341337462395	0	1.46646717515096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-30959040-1	1.82608025750847	0	1.5196135930871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-6230504-1	1.47845991979822	0	1.60442481160865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80277067-1	2.77789759824591	0	1.40221212643189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52960916-4	10.6014037640869	0	1.36261174917869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114979196-1	5.37822694233141	0.417123626442656	0.733837866436562	0.568413876580346	0.569753970122433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	2.20150419972061
Merged-chr12-40430768-3	6.83170100505117	0	1.39567596834346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76856659-3	13.2422947975849	-0.542730686142134	0.558039253885612	-0.972567220608792	0.330768440765067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28908536807461	3.71974208480856
Merged-chr2-12108571-2	5.17055879709746	0	1.36796950162203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123539317-4	4.54597361531351	0	1.36649666382961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95210881-2	3.9600349885112	0	1.37357444922781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12999284-3	6.26383939893127	0	1.34865161443679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118491712-7	20.6049200405156	-2.29654332157646	0.684550005404936	-3.35482185880339	0.000794161078804709	0.0300625362693211	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78702261309498	1.14046671619316
Merged-chr4-132483173-2	4.93425684599455	0	1.36621621478744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60605261-1	2.27153916159544	0	1.59295738668337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12892303-3	6.33472511527302	0	1.39579715724737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103693325-3	4.64489715912895	0	1.38941294647768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79375042-3	6.19679658498781	0	1.36149815865058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114168479-3	6.50881307104977	0.0362635284637001	1.03922133640207	0.0348949037067018	0.972163544392996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.08976818821237
Merged-chr1-164184707-3	4.80515029343049	0	1.37726655814141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71598829-11	33.0630873434823	0.82289703578316	0.324990751303153	2.53206293558661	0.0113393636511314	0.21904636414778	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89549940940837	5.71152204461015
Merged-chr3-38202054-4	11.9592568460527	0	1.36826282989354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-95830057-4	9.88976831286039	0	1.36574784102911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85667705-3	8.22579573767776	0	1.35660075297349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78449360-4	6.40956425672249	0	1.37084436480512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108923269-4	10.1421474216431	0	1.3545982046685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65551332-4	7.04605015324548	0	1.37099546343175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103169141-3	5.86401239241789	0	1.3573132487936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29497009-4	5.02331835158	0	1.40253655999697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22845620-2	4.84794439918174	0	1.39409648298551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-55431127-5	18.4228934262028	-1.78720530300911	0.440230791012056	-4.05970081942808	4.91356330726566e-05	0.0032652370149102	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78097101102438	3.95569321220723
Merged-chr5-76178907-4	6.23947564753566	0	1.37943779425819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39460995-3	6.80855052406048	0	1.38778140965392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37554122-4	6.73972096822288	-2.49713336499636	1.17981586949252	-2.11654498771107	0.0342984832418376	0.46240854428151	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr7-118170366-5	16.1710383459988	0.559664223669304	0.423614573435258	1.32116376245219	0.186446766238501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86030459935135	4.3858789953771
Merged-chr4-142063139-4	8.7024586035542	0	1.3874188439916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106387947-3	4.28235606513064	0	1.39593545493019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34313584-7	14.106064158858	0.500291378015328	0.639803690696179	0.781945126748103	0.434246822819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94421872275554	3.7700293840673
Merged-chr18-5941428-4	6.07215378006305	1.0497317204956	1.27633418099113	0.82245836249597	0.410816074801941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.577068348605183
Merged-chr5-66238349-3	9.38733601045307	-0.807896272792972	0.77792603048825	-1.03852582524577	0.299025318460617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27876782129315	1.4771514048608
Merged-chr15-66813085-3	5.42123408914	0	1.36970578278485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83619217-3	4.60491664947773	0	1.373405124234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84443570-4	6.87717976108475	0	1.35115763114143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168583252-4	7.03391053609098	1.25210472856634	1.31696939168785	0.950747023028092	0.341732811376218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.679405493272835
Merged-chr1-138559926-3	6.03623351474196	0	1.3695414457811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91379171-4	6.72926111139386	0	1.35749272830356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145509097-1	2.57281351003071	3.38675007418405	1.26140821406737	2.68489616320443	0.00725523428127243	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.86607060216178
Merged-chr11-21048167-4	8.98023986165252	0	1.38354810395908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125116309-1	6.12398595431908	0	1.34885964885715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-37091671-1	1.54842390741763	0	1.61228104985932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32010993-1	3.32796342422897	0	1.40702165331734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51730970-4	6.63967724184481	0	1.3975301305803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128718584-4	11.2851735201915	0.463810712277598	0.857789369349342	0.540704663464659	0.58871116362331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65215194967867	1.98728899046489
Merged-chr6-115909245-1	2.56261794848046	0	1.44419395215525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12356126-1	1.47285326350438	0	1.6283612328811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65664914-1	2.37837804154605	1.21329176157627	1.391843907565	0.871715394938865	0.383363659609072	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr7-47012858-3	4.07252615348116	0	1.38846791942019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52807768-1	1.69186891277364	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72350945-2	5.98383307612646	-0.696435402750513	1.36307017125749	-0.510931438040361	0.609399066494535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chrUn_JH584304-12347-1	1.59201268275367	0	2.20851415269264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89293528-1	1.63640210530321	0	1.54024578009266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125380521-1	1.55757038773098	-3.25232794296373	1.63491807170893	-1.98929108390378	0.0466690832450204	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	0
Merged-chr17-73055337-1	4.90326360860215	-0.299563910415646	0.887060862545262	-0.337703897290769	0.735586337524744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62367387427232	1.7642478310873
Merged-chr1-183439241-2	3.93247761663705	0	1.40920563315197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37783935-1	3.30806327759848	0	1.52597539138626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4171901-1	3.4977808909258	0	1.4137191741527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9466426-1	3.44593247143881	0	1.41436958004618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124912113-7	17.5082368903126	0.395305265995851	0.522150287290315	0.757071815563442	0.449006838453825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62344383809729	3.29742022310948
Merged-chr1-138297942-4	9.97123452511267	0	1.36088623366328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6404687-1	2.10662453602483	0	1.47195913865921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85401977-2	5.44316956357492	1.21150513521312	1.05100759481248	1.15270825938159	0.249030150214717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.79973735522865
Merged-chr3-9984097-4	7.56775837182285	1.74751637962128	1.28413813225174	1.36084766563003	0.17356183505254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.904676873936758
Merged-chr4-138211099-1	6.5838280527522	-2.15762736678218	0.802065996903181	-2.69008706903533	0.00714333787099028	0.158815829582479	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44396969568216	2.02078936575002
Merged-chr10-111770131-1	3.16436119885205	0	1.43083173486789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61122801-1	2.06944238270457	0	1.52142445397276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25178396-1	3.78055501058831	0	1.37827241458454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112746907-1	2.68685169459777	0	1.41566120790539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95540238-1	2.31181101648759	0	1.48015731354254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105162984-1	4.10781111959332	1.18307090154894	1.17416900581145	1.00758144329601	0.313655441137058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97643561496984	3.21407391241297
Merged-chr9-22531347-1	1.85186664023681	0	1.45210160455759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32466727-1	3.12257563764832	0	1.42632994322032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33390354-3	7.11896199044298	1.92153653654906	0.945158874903499	2.03303020007641	0.0420494719763704	0.52510159594843	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.34876946313508
Merged-chr11-120539153-4	5.74054492559862	0	1.37478854091548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97078730-3	15.0469618946646	-3.03852112811726	0.733992402912824	-4.13971740859849	3.47733912592317e-05	0.00244850618582976	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98588075226813	1.2960273170181
Merged-chr5-120167891-2	6.86221232972172	0	1.35533853596381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136714356-7	21.5958424879699	-0.581312303341994	0.319702529224535	-1.81829122450803	0.0690196333484414	0.725974893418716	C57BL6J_F1_Control-BALBCJ_F1_Control	5.51114184432221	4.88487580647203
Merged-chr11-101642099-4	8.8588123055974	0	1.36234420957391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129548202-2	5.03480314997057	-0.306141869654159	0.876543378128542	-0.349260375804543	0.726893843129263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52242786274935	1.74294609266651
Merged-chr13-89376292-2	6.12130221053681	1.33304784560561	0.925936629680731	1.43967503053125	0.149959360921907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	2.13795322910058
Merged-chrX-93756604-5	14.3356769342805	-6.55876919018072	0.986140036261426	-6.65095113169302	2.91204967124047e-11	1.25631831808699e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3378289748026	0
Merged-chr14-17409669-3	6.37429320322226	0	1.38519664665379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32591544-3	5.94820008359898	0	1.35830010738385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88740049-4	10.0439024798902	-0.0894819297285783	0.745616506198337	-0.120010660956017	0.9044747027768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	2.42698818581862
Merged-chr1-121508526-6	20.0860418852888	1.17134807378723	0.427863949282941	2.73766480151061	0.00618771086143567	0.143313921907449	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20879108941079	5.20083607068845
Merged-chr11-20561437-1	2.89154921771281	0	1.39428269598079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104243985-2	3.51378913611753	0	1.37682871227679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79107018-2	2.98526834621224	0	1.4987277534677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124616958-4	8.19364243444284	0	1.36492927916245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87839650-4	6.63091163057168	0	1.3609711972841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92944052-4	5.84028940581161	0	1.39241779142331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73765271-1	2.77333356308584	0	1.39690870007061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128638684-3	8.54258460535136	1.25476821249913	0.8194196656205	1.53128886838341	0.125698015473074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51070380065102	2.41012803361152
Merged-chr5-24384675-3	6.85682104925614	0	1.36677897731053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13575121-4	6.7075569360935	-0.447542423080039	1.08957454290994	-0.410749705921711	0.681256075341582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.577068348605183
Merged-chr13-34088466-3	5.150174107886	0	1.37852736487044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94105680-3	10.7590848859696	2.24724685255103	0.58675010737639	3.82998967413815	0.000128148636271932	0.00723503171061484	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3356278069727	4.38854236156437
Merged-chr12-38864735-3	6.78247371647093	0	1.37426024798963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81969539-1	2.81723158165487	-1.16528101753628	1.29563160258814	-0.899392246382792	0.368443767690144	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	0.601513806634888
Merged-chr6-148621786-3	6.05636275769943	0	1.36129808454643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22747175-4	7.31716078315161	0	1.36145409445865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19839116-3	6.9844503052649	-0.130202410713175	0.637667004598479	-0.204185585539524	0.838208475146415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29030395119577	2.86228010699883
Merged-chr14-76279723-3	4.68335842756993	0	1.3823610044269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-162998686-2	5.0649149270465	0	1.36137538992681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31506940-2	4.30412273865375	0	1.39422907572974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34714054-8	31.3932323370361	0.296683811693732	0.386102778424795	0.768406311148884	0.442245832075188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89066005091149	5.25366529276859
Merged-chr6-108477137-9	49.4506294800804	-1.52232942795482	0.376707720823032	-4.04114209453639	5.319151452368e-05	0.00348786192761486	C57BL6J_F1_Control-BALBCJ_F1_Control	5.67172186001399	3.40910271226982
Merged-chr13-60712771-2	12.0892922981928	0.167659406681002	0.561960259570422	0.298347443303491	0.765437997541185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72054584236027	3.38850799696543
Merged-chr9-21328254-4	6.80758080352935	0	1.38338985769117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21012001-4	6.90637793385059	0	1.39234790541377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118163860-3	6.77048236440306	0	1.38297129610152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49121472-3	5.09850569238767	0	1.36720506770725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-28911785-9	30.8649287897938	0.210810485855932	0.31418369230434	0.670978446748046	0.502234260059707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62930362999956	4.80493716124295
Merged-chr11-22008240-4	5.21967345480232	0	1.40046647032048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57570599-3	4.99393187888169	0	1.37800952604418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152406799-9	23.614405884484	0.677171901246994	0.36511435811268	1.85468439189129	0.0636413088972685	0.691480693653132	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61602177885601	5.38365313532828
Merged-chr19-24990645-6	24.5885774426681	0.370412839154539	0.411236010897154	0.900730552138285	0.367731600213785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92524636778637	5.28044267787306
Merged-chr11-111165123-3	5.80886811339288	0	1.39316273224274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118242869-2	4.45549792202688	0	1.40244030137334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-111886257-1	2.30568091934381	0	1.42000152497023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22092778-2	3.09280990194849	0	1.44861830126242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84020725-4	12.8350419394526	0	1.34753427393063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31759543-4	5.92726487643332	0	1.35646405568604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114071635-2	2.95964951548419	0	1.44441765449901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122580666-1	5.34229587281363	-0.773770462702776	1.00639609515164	-0.768852806991648	0.441980696040167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47092068604539	0.988408630094828
Merged-chr18-42792222-2	6.20616172551586	0	1.37816497493664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27693828-1	3.47361658157492	0	1.43318852004488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99124083-2	2.67076603387933	0	1.41225555177105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134095830-1	2.19397356672728	0	1.51965649280751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52555249-2	2.82864893711495	0	1.49114456598244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73849946-2	7.19720933384787	0.227181104368657	1.11049088584055	0.204577189480217	0.837902478623424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.662147012823607
Merged-chr17-27046880-5	10.1209530763717	-0.510471166873849	0.743549812535845	-0.686532574237237	0.492377330402419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37705875126183	2.02922356684558
Merged-chr3-137969384-3	4.81769457002881	0	1.38390281387236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176853367-9	31.066792896344	0.662813147751219	0.32736383582246	2.02469874562041	0.0428983075188082	0.531065611117033	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68812593862815	5.32899362532512
Merged-chr11-86908491-4	9.09847080944571	0	1.39536241337569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157046867-5	22.9855240959809	-0.356644815139976	0.392542653064511	-0.90855047816005	0.363587457064396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56527867477605	4.21271108525678
Merged-chr18-61632536-4	8.1057760831695	0	1.35088534630694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152111237-2	3.64741914027837	0	1.41064776794512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47072767-4	6.34226555514023	0	1.35056746268671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129365394-4	6.55598427910587	0	1.38229571686577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110471735-5	11.7291219899423	0.673379741057448	0.794408255195755	0.847649475761699	0.39663321181361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	1.92835129883284
Merged-chr2-84538171-3	6.42630273667613	0	1.37437955092951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84442767-1	3.84540171124426	0	1.38344622739891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129364168-3	10.2026906819665	-0.376138908330471	0.725155585607179	-0.518700973689015	0.603969282591167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94696388258843	3.87949912283229
Merged-chr17-10743702-1	5.27832421477957	-1.71838032310349	1.02350576441517	-1.67891611639859	0.0931683931186711	0.870401849224179	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3197686931346	0.730937814817307
Merged-chr12-34616140-1	3.57604664298456	0.25901821735214	1.43817684528411	0.180101785257829	0.857072661093911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.723581231604105
Merged-chr3-138493883-4	13.464740949013	-0.719979677890817	0.659858838469084	-1.09111166800647	0.275223749267608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.581379703232	2.43226246007973
Merged-chr2-128748712-1	3.14775241168618	0	1.4703181453544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50390322-5	13.2065059853054	-0.342013610917135	0.584390280062501	-0.585248630214309	0.558380550297163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77460847778507	3.38166980900707
Merged-chr7-90481037-3	9.35325319746238	-2.16124595693727	0.736897260469442	-2.93289997517489	0.00335812061490408	0.0929450501555859	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4989608393747	1.71483396990367
Merged-chr5-24261248-6	18.2959658788509	0.963591756691744	0.421083793031521	2.28836106408781	0.0221165031220734	0.344281498629091	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56645325292408	4.51971051329465
Merged-chr6-97504957-6	20.7481125359618	0.0737170060512599	0.321322889229062	0.229417226479341	0.818544648384214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05792330776178	5.16430390495004
Merged-chr17-12372227-4	6.71660614473711	0	1.36159437182608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66016328-4	6.08355205736644	0	1.36713972203281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4902553-2	3.74832858089269	0	1.38847618133062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108378253-4	12.3256671687605	-0.477443399420193	0.561588683088004	-0.850165635095918	0.39523300462148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56134390254646	2.63517856902368
Merged-chr1-164652442-2	3.90397954554133	0	1.45359759893756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155470620-4	8.27103298518924	0	1.35300671162931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52605482-4	4.83539891616806	0	1.36420901764562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57591750-4	8.50547489601741	0	1.36136539866994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87522524-2	5.15736152762659	0.53852288837292	0.892121500981061	0.603642987844939	0.546081025979661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76891977860032	2.13118170172995
Merged-chr17-74414835-1	3.21956042273204	0	1.42423509117636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5575949-4	7.49905348927331	0	1.38539628530158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115343294-4	6.79423355436817	0	1.38778364898065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-121009987-2	4.38345382564458	2.19340417583621	1.22402513465026	1.79196007806076	0.0731393611511661	0.752276732793991	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.10056930386922
Merged-chr4-141575531-3	13.5253228491111	1.21059517703621	0.483290539358937	2.50490145874159	0.0122485513257656	0.231669798718612	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66067886431113	4.21462642095766
Merged-chr4-58470457-3	6.66488012129502	0	1.37233554808382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49968893-7	15.9675640850195	-0.224756004167266	0.442021854288414	-0.50847260601874	0.611121945676759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95403866363888	3.71774487809046
Merged-chr8-128551585-6	16.4239588107218	-0.0147400529422998	0.438183183775483	-0.0336390201360452	0.973165006295136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97715045765267	3.87012652764112
Merged-chr3-52029871-4	5.26105666827712	0	1.35497654143949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80026342-5	11.6184188283973	-0.855301423005211	0.651356131500541	-1.31310873060308	0.189146312367767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57889898705706	2.82416335224072
Merged-chr12-17253238-7	17.263525216295	0.0268735579499543	0.359884174957741	0.0746727970272932	0.940475052055774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74794507718768	4.75466478953764
Merged-chr7-132568990-3	4.47516705993057	0	1.37735181593693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31956517-2	3.23412670952917	0	1.41376625204933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66520356-2	4.20981213893697	0	1.37777704002335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103832117-2	4.99330964040886	-1.92418892739165	1.15923697421275	-1.6598753923445	0.0969395227892558	0.893151354043174	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60139579763857	0.790093605168944
Merged-chr5-36742586-2	3.88111128828251	0	1.41085161453719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65485941-2	8.11269857425742	1.66985464762319	0.833455049362947	2.00353294265785	0.0451201153357994	0.550546430872889	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7821740460218	2.9553013676548
Merged-chr4-137814430-1	6.39164605300348	0.526988110997097	0.928060251709739	0.567838251909013	0.570144803318956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96617270997603	1.43496577401111
Merged-chr5-124467963-3	5.54743139591403	0	1.36492535380159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97454500-3	6.75218399730501	0	1.3635084299023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82917103-3	7.08088373372509	-0.559395667727108	0.930702872251532	-0.60104646112656	0.547809041339616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	1.06872581468896
Merged-chr10-130247221-2	4.52773902959028	0	1.37688377189735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53594941-6	17.849571127626	-0.494507544605979	0.667924699212091	-0.740364213494903	0.45907902717041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80720849528393	1.67285245412069
Merged-chr15-9118770-3	5.51624245818233	0	1.38577018136694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144320209-4	5.17859213314797	0	1.3926851794017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78059914-3	5.08197351276149	0	1.36966920620029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121373167-6	11.0051510427901	1.13753367941205	0.803093570286961	1.41643977924713	0.156646784120643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	2.24271415224789
Merged-chr5-122145587-5	14.0771632554503	0.858379639201165	0.50985532317814	1.68357492837484	0.0922638474447673	0.863846699994284	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48718831954708	3.80818417235793
Merged-chr10-84829230-1	2.63841996064236	0	1.42755900183257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75422668-2	5.00636386065381	0	1.42961991009426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21021609-2	3.30946478128795	0	1.47187509266468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20750123-1	1.84414885436782	0	1.51110145398163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9071761-1	2.0636828237489	0	1.56615196386641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115533859-3	7.92255741690987	0	1.3480124402235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-37164759-3	4.04101690677269	0	1.44682580217608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50803639-1	3.63736721473426	0	1.37671614246244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135956869-1	2.62926949238147	1.17725281450811	1.36595442893964	0.861853653069514	0.3887680558837	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.40024388691264
Merged-chr3-146657144-2	3.27039819167165	0	1.45079816962123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142065561-3	3.87347772130433	0	1.40728790853968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39587024-1	3.68871811663929	0.434654279006874	1.17458948247564	0.370047821380768	0.711346859164081	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09309400240657	2.98398243319659
Merged-chr4-105560706-1	2.1923812382146	0	1.48254370544245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144562212-1	2.58366661851226	0	1.4503314969062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73730297-3	6.99533241791857	-3.28441604149414	1.18686572516827	-2.76730212343817	0.00565223467428066	0.135054867982076	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9249081550311	0
Merged-chr15-98477907-1	3.3186643795677	0	1.4106712715594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15652061-4	6.86593581209491	0	1.36860460473129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34611591-1	2.59053970783145	0	1.47580755968123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78764679-1	4.2184288589846	0.679134012192835	0.961608490086176	0.706247936862509	0.48003396415937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52572753666912	2.62868091312828
Merged-chr2-26661602-1	2.39499493822707	0	1.42252867293329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74596162-3	4.77019308080562	0	1.38278157124205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48838500-1	2.06643158349714	0	1.42331083674387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58270282-1	2.08889172015717	0	1.54345862192113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31337312-1	1.5926482778039	0	1.4891832459009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-67847391-1	4.00308228843793	0	1.38057654937179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55469291-1	2.26276091757156	0	1.42231430770003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81232924-2	2.16928863043581	0	1.50194737073975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83842786-4	10.0344106176348	-0.304865903028592	0.917614575698128	-0.332237424189396	0.739709986757509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	1.33175291456033
Merged-chr18-52244175-1	1.50773453366568	0.278830519490977	1.42571471692611	0.195572449509496	0.844944825934466	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.02674429890598
Merged-chr2-156201634-4	11.7634641505525	0.146148889184741	0.481270790876464	0.303672884279103	0.761377118211295	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88988654613504	4.10270712041714
Merged-chr4-59340879-8	15.1641568219881	-0.0265020241876298	0.553520282587261	-0.0478790480156467	0.961812637498397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20722765583003	3.22595931975331
Merged-chr3-69062954-3	5.01949311319775	0	1.38328607180275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33003777-4	9.55195045943893	-1.61403877614013	0.937304458924845	-1.72200053117377	0.0850694222726024	0.82326664150194	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47126464988938	0.724326877898254
Merged-chr10-100948702-3	4.51693990848207	0	1.36872530048361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75905646-4	6.6667727892729	0	1.35499974982364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77878080-13	52.0885980198309	0.227376052189226	0.240704862755929	0.944625919002646	0.344849889739824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77268071031424	5.94456239443705
Merged-chr6-125426045-2	5.28611786267453	0	1.36257157216183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57851342-2	3.74015967428044	0	1.41738639894344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26890760-2	3.9466042860095	-1.85420233937012	1.27370777725848	-1.45575176070691	0.145461255428462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr3-55549651-3	6.94324410851596	0	1.36603626631289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90611632-3	6.17942457271682	1.49215238921215	1.2431025224488	1.20034539570618	0.230005226182317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.08976818821237
Merged-chr7-118766189-5	13.8909534235913	-0.113949433877663	0.444139114151115	-0.256562482895602	0.797516540014497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82110986488972	4.86246763096903
Merged-chr17-71221626-8	23.8231307401282	-0.700231337800504	0.508184990881054	-1.37790637339858	0.168232196932608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81274967359964	2.57556029837948
Merged-chr10-68126374-6	22.3327836934475	1.14166906109228	0.646136023880349	1.76691752030173	0.0772420423931364	0.777466430240157	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62128842389662	2.6292307932354
Merged-chr9-121372177-2	3.90152433130504	0	1.38396702564269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5735089-5	11.4476984182888	0.110531096578121	0.625151505872043	0.176806894872528	0.859660073057016	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08320653278703	2.64855294742974
Merged-chr5-32104302-4	6.56136975346666	0	1.36179807064922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126655922-4	6.63947816457979	0	1.37803242137387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105599534-2	5.57523026921626	0	1.37114497651153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120555035-4	6.55952130004451	0	1.35866329169718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36550371-6	12.6097115361537	-0.21729311133706	0.483805368002648	-0.449133320355946	0.653335485134186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0833050856895	3.85743867489366
Merged-chr11-90242586-1	2.59428091453522	0	1.41626983304257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39666807-4	6.49120297578318	-1.25942870942125	1.22075621276778	-1.03167913154895	0.302222456606507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.465515277017237
Merged-chr1-152533966-4	7.12435821709335	0	1.38170528023777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82995559-4	13.7684695844346	-1.7789133917491	0.562783595988681	-3.16091905383979	0.00157272197707101	0.0512846994310757	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42147632606462	2.88196236592772
Merged-chr10-111102476-3	6.7233536825563	0	1.37134046183697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80035300-3	5.15084611252609	0	1.37060359370572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35061127-3	8.52801152404429	0	1.37616111404096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62187115-4	5.91402432050729	0	1.35292925218294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38013931-4	5.55381644204585	0	1.35754974422939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127264131-2	4.88886891942343	0	1.38688381921248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6374007-2	4.63287743433266	0	1.37639008193368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58986033-2	3.68295074653553	0	1.43942942876266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73170087-4	5.02698847206462	0	1.37834679931317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10495198-4	4.75857490653466	0	1.38870556194859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66919570-4	8.31207909668282	0	1.3490408403482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96300508-4	9.96438477919276	0	1.3564737763813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108215012-8	27.0218209523932	0.536227123315372	0.314066501242039	1.70736809304639	0.0877536569850936	0.83893792473667	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58363003070819	5.06154914545088
Merged-chr17-35869751-3	13.1450791013968	-0.16628055228435	0.555235068660273	-0.299477755764902	0.76457554198734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26561159551609	2.45666370916973
Merged-chr14-93650258-6	16.4381044991872	2.78612609329739	0.649722190688434	4.28818059968871	1.80142601150547e-05	0.00144005465528567	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	4.31318491096519
Merged-chr3-108164910-3	4.82491137918662	0	1.3796632560436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-87926539-7	18.3421770461946	0	1.34824366095738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8663105-1	3.12511355496056	0	1.39334523301409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5579609-3	9.76166398155159	-0.94085054163567	0.62586665852366	-1.50327634300734	0.132767797945678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22416778864126	2.06654838432352
Merged-chr11-50321489-3	5.6507984246189	0	1.37359906673843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93799732-3	6.94176530376885	2.69600093822984	1.19170780180866	2.26230031735809	0.0236788548371554	0.361968186190363	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr17-84085922-4	6.34730757261491	0	1.37600268242068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50047865-1	3.66059242147716	0	1.45522796901401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24569890-3	4.46187886480333	0	1.38623593812269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128963124-1	3.23993392947064	0.312802336206929	1.24268480014913	0.251714945068445	0.801261404384597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.02748994520012
Merged-chr2-5691962-8	18.7759801442198	-0.616552160469843	0.417077240386667	-1.4782685334214	0.139335916532922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69480361703743	4.04680776687885
Merged-chr19-17361399-8	22.2704970304011	-0.903642974803749	0.399142957854043	-2.26395820600746	0.0235766854324899	0.360812230693897	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98883392333246	3.76121640782269
Merged-chr3-107133099-2	8.23124464385654	-0.919199133649764	0.772871342036749	-1.18933007818274	0.234309803748844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30810693946836	1.41398715281163
Merged-chr1-165701030-3	5.5677253318282	0	1.38439503678033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67973664-3	5.72067532094441	0	1.36175078639832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51498148-2	4.38366514148763	0	1.3779190583347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7470241-2	3.77302481907697	0	1.40081690404368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45623665-2	5.00909137667792	0	1.37676213518217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102751164-2	4.0132288842069	0	1.40545671425894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43072987-4	9.12425353929462	-1.19476653682596	1.12364946950814	-1.06329115017422	0.287649937256751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47971361857133	0.601513806634888
Merged-chr3-96716028-3	4.0031462053556	0	1.37692400579076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128805309-6	15.6523360913091	0.275259060880145	0.581520529836576	0.473343668464294	0.635968012015215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34001935796286	2.46085694114195
Merged-chr16-35754102-8	34.2232604392643	-0.332111706994498	0.387292977787614	-0.857520600790812	0.391157234598818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24319363576369	3.98790989567142
Merged-chr10-122715565-5	13.788130102407	-0.180128059555063	0.626717570668191	-0.287415046243262	0.773794541764325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62524321197361	3.19195759129799
Merged-chr13-40952999-4	6.11109421818702	0	1.37476536681258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155473030-6	16.2517688300897	-0.879545645900814	0.603876850678878	-1.45649836537372	0.145254901170431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48459239090607	3.0388078486119
Merged-chr12-113218044-8	24.115999585472	-0.965584473080703	0.381631243114497	-2.53015048034473	0.0114013616464043	0.219764667053258	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43494035496724	4.31858271434463
Merged-chr6-31114581-1	13.2240632738109	0	1.34316352640932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141959114-2	2.25963429681285	0	1.59146586401528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118599956-4	11.3472420843983	0	1.34931145204442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152468931-1	3.78938954438446	3.37967263900677	1.18069842588571	2.86243511883356	0.0042039932324597	0.108925103967243	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.44781846697131
Merged-chr6-16891635-2	3.84361125752374	0	1.40211640129482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69400472-2	7.28868002065039	-1.59335151226815	0.884436746504546	-1.80154377185861	0.071617214625463	0.741814056750294	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07952021438838	0.662147012823607
Merged-chr6-136692710-4	15.7233051485248	-1.3389725493797	0.615141219675305	-2.17669131339705	0.0295036068609935	0.418946781962249	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11509062137065	2.63616764430036
Merged-chr3-51719185-3	4.35617477358876	0	1.40992167766002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32249289-1	3.47859104160466	0	1.39169530724054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53265706-2	6.1744340094617	0	1.37644021953603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-79816661-1	3.7542109437889	0	1.41406692446789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17872332-4	21.302062482787	-0.0718849014179419	0.450520280815796	-0.159559745651791	0.873227890938398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46871419416706	4.32820115370997
Merged-chr5-99523074-2	3.54379907930834	0	1.47804638718361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103846698-2	4.59297031651722	-0.23475718638288	0.844662622342259	-0.277930122836377	0.781065999836236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98088044523647	1.85699717634292
Merged-chr7-110184838-4	5.10007979865761	0	1.36983223551078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59774213-3	6.11015538405503	0	1.40656283176935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83417493-11	35.5045866207142	0.0380752598738891	0.386268984656276	0.098571879665075	0.921478198034031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27684135397523	3.91075163103737
Merged-chr6-83131841-4	6.51071193152069	0	1.35460698579323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108835946-4	6.32804038786516	0	1.3772527742107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58576177-3	9.44986930453146	-1.3376275176095	0.607349718745195	-2.20240081838365	0.0276370081303931	0.401475180374142	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71369318304029	2.55617306264332
Merged-chr12-10068305-3	8.75175450167493	-1.77529509114621	0.968258981491218	-1.83349199447866	0.0667294380103048	0.711860256250375	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83283749367074	0.662147012823607
Merged-chr8-117308440-3	8.58464753311976	0	1.35320835209623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80410516-3	4.66798043622509	1.12197001273956	1.28830840615582	0.870886200368284	0.383816292287981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.67591700901439
Merged-chr9-83570085-4	15.4012326766461	1.33005379321655	0.489459454790561	2.71739319814687	0.00657983874296906	0.149030605928773	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95123578646043	4.90990466795765
Merged-chr1-177986911-4	6.12567708620439	0	1.35593531977913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140382853-2	4.51337676742331	0	1.38142047752571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130204764-3	4.5023179282058	0	1.39558463859778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60369758-4	12.1491913474464	0	1.40507484422806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-31135819-3	8.94941043617385	1.31149083176827	0.76911219474423	1.7052009326213	0.0881569561502271	0.840871026385365	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62635771927786	2.93415672330046
Merged-chr4-129504778-3	7.14832336516129	-0.0347320028490456	1.39538499737783	-0.0248906236732609	0.980142206143536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.41385117919798
Merged-chr5-79794969-1	2.23764725386936	0	1.45462106231618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70181620-3	5.29787425975687	0	1.35979368663211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43757335-3	4.71628511663426	0	1.4089357540218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33119117-3	4.43172483305144	0	1.38146954193777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143499882-1	2.80724875760626	0	1.47181066816027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59865352-3	6.6070682631782	0	1.37488738284366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9130030-3	5.52537002633573	0	1.37215922977055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33110943-5	11.4088814398549	-0.566768465012646	0.858689897694268	-0.660038584982213	0.509229068609637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65288709737369	1.21849460895724
Merged-chr4-119968302-2	5.14286899960143	0	1.36688731559043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63813042-4	9.39931212983503	0.254339964490842	0.88128378203578	0.288601662342307	0.772886223245644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.39949824061849
Merged-chr13-64922652-3	4.88675421293154	-2.20677948311787	1.12746092076443	-1.95730019770587	0.0503121842826547	0.591717876551456	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49065419848114	0.600815099743027
Merged-chr10-118126918-3	9.83144306162163	-1.49428341597301	0.60681126278821	-2.46251760243702	0.0137965400470225	0.252428852378357	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72092326194027	2.91611035765265
Merged-chr9-13545963-10	43.9310893860515	0.434245272465086	0.295392664467776	1.47006112439348	0.141545200033341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85480652321681	5.32237055023641
Merged-chr9-94617312-4	12.3076198133417	0	1.35221021998101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95801396-4	7.51125584779102	0	1.36271470519948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-139571308-4	7.74028209901263	0	1.36458765990281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86879374-1	3.00955599575759	0	1.38996036611387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37335292-4	7.70993940636441	0	1.39027708659271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88623731-1	5.73389859110702	-0.830161148677807	0.801196961423089	-1.03615114466145	0.30013163496963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84601879663859	2.43104886968133
Merged-chr1-34468328-5	11.8116675168009	0	1.35150221478871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87139637-2	9.88635568904481	-0.473965458347567	0.711488561099117	-0.666160335192712	0.505308622843396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16596752412581	1.41478649953382
Merged-chr17-79095836-4	13.2437558397735	-1.99774483750594	0.476168785777572	-4.19545526119205	2.72324038292999e-05	0.0020031478210513	C57BL6J_F1_Control-BALBCJ_F1_Control	5.28628673534837	3.27742249599385
Merged-chr2-28441027-4	5.35985610269473	0	1.39828884026634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63117194-2	3.83065417043969	0	1.371706943894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141558369-4	8.16573207307189	0	1.34975668496567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91846649-4	6.12560282812482	0	1.3703988720022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-37849645-3	5.63700911555885	0	1.41716245467513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76856764-3	5.68587339497618	0	1.37268213416423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20172358-3	5.85098199966276	0	1.36200932034395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20855134-2	5.92316648831027	0	1.3980411522988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35460446-2	5.61270242679143	0	1.38076915853956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90963495-3	5.3660090017822	0	1.41055375117925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23688266-4	6.47177571189695	0	1.35564842025379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9901823-4	6.99806818424856	0	1.35517180478011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6733238-4	8.54340984421633	0	1.36281329703855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50469297-2	6.93821529409705	-0.309087972876098	0.898936019001596	-0.343837566125548	0.730968447058441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95160684218358	1.86852815722235
Merged-chr6-145517177-4	9.88798855993381	-1.39257343331211	0.798489525849142	-1.74400964349683	0.0811574082877123	0.80109597913778	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88341289616239	2.28521175839365
Merged-chr10-117921169-3	8.71030203622622	1.26630934676895	1.06570812583432	1.18823279664644	0.234741705910299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.4068548238317
Merged-chr11-120894131-2	7.61538249002264	-2.15614839193412	0.700666829381755	-3.07728052980135	0.00208898604235586	0.0645199956116035	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70725431807534	1.44790810950236
Merged-chr18-39741990-1	2.00603473488215	0	1.88006734611594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92751168-1	2.41618027675618	0	1.39957813834959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8942607-1	2.59588078570632	0	1.41396501994597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35183403-1	1.37462693195728	0	1.55395904805823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88768415-1	2.96906756121652	0	1.45529927781351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46524010-1	5.06862043619536	0	1.37836496708612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31785878-2	2.53554292698458	0	1.45174859890351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88420175-1	1.74267686274476	0	1.58013748145713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50627768-1	5.45185646004241	-2.18341740663129	0.855763419836843	-2.55142642933671	0.0107282971806985	0.210837009440848	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70797273052172	1.44422453547533
Merged-chr1-88474753-2	3.26727877305974	0	1.40955703781274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66308139-1	1.74169901713965	0	1.5439553221043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64929719-1	5.35517362999308	-0.0143818947668709	0.698780896294524	-0.0205814080538475	0.983579571549241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48366051229539	2.81677423320771
Merged-chr6-113748415-3	5.81220279030023	0	1.35355493195134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34281903-1	5.60583856325732	-2.07844574372369	0.991343094715039	-2.0965957747667	0.036029373635225	0.475492124377258	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50831231808857	2.10257130558249
Merged-chr1-177261018-6	17.0944991605965	-0.277452579469212	0.500606409631103	-0.554232974511186	0.579419414107744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73453626897437	3.48888251570206
Merged-chr18-57826643-2	5.32827683923034	-0.805729210470463	0.861516208857264	-0.935245561472606	0.349661763198638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56424119785219	1.70340695421451
Merged-chr9-86478533-3	8.54918673772151	0	1.37358964492025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-13787643-1	2.26413060460061	0	1.42891522359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20083023-1	5.45231057485062	-0.479679630114499	0.8860753351068	-0.541353100700723	0.588264226587518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27624770054806	1.52554022439958
Merged-chr4-65565680-4	7.26366034601321	0	1.35367979445223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53180151-1	1.88527951481553	0	1.53048371314285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119121424-1	2.19686209961791	0	1.46457747664137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90352430-3	3.96348602170065	0	1.44410500905495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21081517-1	2.22257836978054	1.05120309359818	1.47920047487326	0.710656271042808	0.477297263835203	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.30064958020929
Merged-chr18-32349050-1	3.16628222418785	0	1.47782153172642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-77969388-3	6.13562395468336	0	1.36858762430585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30992362-2	3.13842946047297	0	1.43813552289457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34765953-2	8.77735919126101	3.36568047994964	0.844228783141428	3.98669240750799	6.70007962479258e-05	0.00417671592114794	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50282389800248	4.64088786872997
Merged-chr9-63614759-3	5.30765581393904	0	1.37252818749095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90136973-6	13.9497640203321	0.571381285906764	0.682746606940999	0.836886306131641	0.402656478380866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78671256729753	2.92218024130493
Merged-chr8-22962222-6	13.1974821697616	-0.211368008173994	0.729834925869627	-0.289610706040329	0.772114075630346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5473977117727	2.16696648475163
Merged-chr6-72955060-4	15.3877955252815	0.116838900629568	0.49964284998883	0.233844836631166	0.815105439820093	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27779741445574	4.43510096544742
Merged-chr11-75566031-4	5.78631797329556	0	1.37729548844078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20509100-4	7.61859144185069	0	1.36807716556709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5986616-4	6.67837721447692	0	1.39039675462996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134734608-3	11.8732111510211	0	1.34506664733573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32179916-5	16.7837262219576	1.79638576086211	1.05044371297855	1.71012091239846	0.0872435164482686	0.835972203527487	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	1.46460328489499
Merged-chr15-73147890-4	6.46390739230067	0	1.36208922884664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14236285-2	3.53162376477413	0	1.39913852052442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37484366-2	4.17917571123048	0	1.37906307780044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38604662-4	8.81921028728178	-1.54328572895169	1.23025117231863	-1.25444768001569	0.20967933135868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.303163067301871
Merged-chr5-105651306-8	20.0000458724719	-0.531799725843266	0.366517150462718	-1.450954546525	0.146792517462327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63287673710926	4.1864022005598
Merged-chr9-72089118-4	5.27428966609708	0	1.36039528151618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96500968-5	18.9664153007907	-0.482291264014349	0.449022328174331	-1.07409194098495	0.28278147619737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00844306192696	3.55420405625737
Merged-chr11-35842163-4	8.15542265488497	0	1.35729634349983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90126447-4	9.43565254960113	2.00127362734103	0.907159325443514	2.20608835869332	0.0273778136517831	0.39882332187484	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.33494576651626
Merged-chr8-56767321-2	6.96942698653739	-3.3075109436661	0.9426336935768	-3.50879770817	0.000450137137077978	0.0199137760999553	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77823341574812	0.723581231604105
Merged-chr17-36903762-2	3.2934834558152	0	1.41575217685487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51387342-3	5.40990675638331	0	1.42753073923036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102448478-1	6.14930794807569	-0.58584232190958	0.729693107107008	-0.802861252495931	0.422054933930791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77637591504923	1.88803440763582
Merged-chr8-45439375-3	6.37783224596885	0	1.3592075851682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134321618-3	7.69488140118273	-2.53874299837642	0.598984608234837	-4.23841107680197	2.25107310625356e-05	0.0017323614484206	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71056478532561	2.0560328530563
Merged-chr11-47075221-5	10.4023309477508	1.73052001271644	1.16407239578663	1.48660858120172	0.137118220075063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.18909650862134
Merged-chr8-41100527-5	14.8953031813212	0.190514587954589	0.540995296995398	0.352155719306022	0.724721483353303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77632770422068	3.31971007095414
Merged-chr12-12289378-2	3.61695077952717	0	1.40644585935385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97936538-4	6.4940833562686	0	1.39310678593261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104460293-2	6.58004892479686	-1.6808471315537	1.12932839207786	-1.48835993440412	0.136655996769195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	0.465515277017237
Merged-chr16-95821179-3	6.02025620779118	0	1.3647142545247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96564040-3	5.43374333475075	0	1.37069589669358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45795842-4	5.52255989002956	0	1.3592686490544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122064737-7	19.3061546565292	0.312794581326411	0.487273669992549	0.641927936166126	0.520919974524379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61920610316814	4.53062426973153
Merged-chr8-103482480-1	2.33527272155301	0	1.44301861022505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131142814-4	4.3661917762368	0	1.38054338289466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70004597-1	5.25955413282569	-1.43120420329644	0.8425857294313	-1.69858585696963	0.0893972431141812	0.847612262068189	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03721561773135	1.66683653681755
Merged-chr8-122163210-1	4.97725809454445	0.452939399370884	0.709326974868323	0.638548110277303	0.523116946855278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11197723984608	2.95314773288896
Merged-chr7-65486402-1	2.77624932247532	0	1.42057780664973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57183038-3	10.6477063978232	0	1.37366657906639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67033434-4	9.43242309525405	0	1.37418815242831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150648096-4	6.96202915483958	0	1.37234485216322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164792559-3	5.188449676256	0	1.40233505381868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46334278-2	3.83489428615629	0	1.38531022438414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182937824-2	4.78872836772041	0	1.38053734029846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52141420-3	5.16571072166005	0	1.36316094376117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43394675-8	20.8721664583915	-0.0982709347105149	0.424026979976977	-0.231756325307061	0.816727280858228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8073483566238	4.87260621697848
Merged-chr1-87026166-2	4.12572611160546	0	1.36609546944975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98339260-4	7.91788136702287	0	1.36513323810729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40497143-3	6.49699489313741	-2.90218037241169	1.0663818503192	-2.7215207868954	0.00649822981253694	0.148137151085022	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32184109428021	0.55634759613363
Merged-chr4-132800089-3	4.50999789654698	0	1.37865256042808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48552467-5	9.87978120385922	0	1.35337150585527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31170083-2	3.17957702133801	0	1.44654085955542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12867549-1	4.22612071514821	0	1.37606328829852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91757525-1	4.55650006132774	-3.39132429210924	1.08885624793471	-3.11457485645303	0.00184210208313485	0.0585241537914246	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37833055520499	0.413263464506793
Merged-chr6-67087607-2	2.04552213045581	0	1.56264027176432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16993899-2	2.59668783418041	0	1.55938205870867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44724524-1	3.91580261526428	-0.203352675921024	1.10921405901114	-0.183330416946132	0.854538769556089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	0.815004392037195
Merged-chr2-102360740-1	3.06743744951648	0	1.50347386194405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-111984815-1	3.98565003305187	-1.26816920684942	1.42340199795547	-0.890942410275506	0.37296006658132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr11-46806436-2	5.3123115987141	2.03306954194947	1.27019999167152	1.60059010807743	0.109467734627367	0.963180419891486	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr13-73791451-2	3.20357052310439	0	1.54850636300589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35076169-4	10.3904938981758	0.57111051036618	0.620732005473423	0.920059712291784	0.357541556078128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21175319635018	3.15288285459245
Merged-chr7-101912103-2	3.0556768393174	0	1.43669351408522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28518218-4	8.3738779894112	0	1.37429469888427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52591079-4	5.93121353031966	0	1.36611879253277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80788517-4	8.69505364054572	0.64233165164453	0.608039744204862	1.05639747691906	0.290786658230459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85419949900662	3.41052590011698
Merged-chr8-88621625-5	23.8157896425351	-0.354520644469211	0.366346427914442	-0.96771967038807	0.33318439154072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.43768560634294	5.06917674233376
Merged-chr14-76899473-3	13.1561718704191	2.36728687110202	0.524467856672039	4.51369295751204	6.37084322594148e-06	0.000608633861017492	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52250096655787	5.28467849211219
Merged-chr14-104002681-3	4.72128618716983	0	1.43604527360601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29735873-6	24.2417605845352	0.327910198169005	0.434905180997955	0.753980896287704	0.4508606929558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58014563153256	4.00282685409097
Merged-chr4-156033724-8	19.1915378724999	0.124869793209177	0.467172353417841	0.267288490630123	0.789247047653591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9950231853406	4.98555291686222
Merged-chr5-151069997-4	6.97400804561157	0	1.36054832447359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64022455-4	7.92483319606213	0.854897605633154	0.790621194431157	1.08129861892742	0.279564301579082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82866868473699	2.38219724443922
Merged-chr19-29355711-4	7.90990809914881	0	1.3483856209108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43166327-2	4.57566587031268	-2.52065035102527	1.05685586890876	-2.38504646203832	0.0170769644440142	0.290271016326506	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17401694765397	0.724326877898254
Merged-chr9-82942069-2	5.31512969206284	0	1.36991028084884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8962518-3	8.36171823930043	0.330682493439332	0.946218725014261	0.349477858234468	0.726730590753499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	0.948471875794396
Merged-chr8-83235916-1	5.13924361256704	-1.23130983511395	0.860022807192174	-1.43171765308639	0.152224642193853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18272394346079	1.97731223551783
Merged-chr19-57591466-4	10.1639563822246	1.11338063189496	0.707315533169801	1.57409328606909	0.115465884516547	0.992349409713037	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30127498244712	3.449061260187
Merged-chr11-29653950-8	23.4116151018597	0.201375628179733	0.32448741981695	0.620596102903876	0.534865404444929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65225619087515	4.87495147812941
Merged-chr1-80639151-4	6.67747835566798	0	1.36651632744458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78536957-5	13.6922437340029	-0.468828861392166	0.859309947122125	-0.545587611271461	0.585349442170346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54084633208408	1.17858215524007
Merged-chr9-45412498-2	4.71474274186528	0	1.36843183656237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99511900-3	8.35542464722562	0	1.35587560694085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113396078-1	6.10539339850146	-0.837720335914141	0.880117439686977	-0.951827901753753	0.341184269102172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0347584185104	1.40656288505669
Merged-chr9-120037484-3	18.4023197043466	0.172454568636941	0.490658892960691	0.351475477385788	0.725231666627734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55261256135935	4.8321849561345
Merged-chr15-19869251-3	20.7175624404037	0.540275740734334	0.944227872253606	0.572187876052471	0.567194700256417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50228770993649	2.62074638715026
Merged-chr1-171377323-3	6.01957163361265	0	1.3531893149944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57975645-1	6.12856442355552	0	1.35561186332079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56824349-3	6.46209493354957	0	1.37268087676284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30550213-3	7.08608241571972	0	1.39361355481409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28215488-5	12.1028205666587	0	1.35002622751737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67945564-4	7.62810521029956	0	1.36937633400119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101815752-2	3.05513245728476	0	1.40701782965702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116087367-2	5.49520448619139	0	1.41271498026823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53449350-1	3.76713389910046	0	1.37444187099441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101972843-4	17.646825103059	-0.462540093211211	0.504506037001341	-0.916817756949817	0.359238146109264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61377161740381	3.27523744236937
Merged-chr2-117346713-4	6.2857305942806	0	1.37685439487876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44818002-3	4.51355163767699	0	1.4155984707519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38986174-1	5.72311936231098	-0.976258031121027	0.91028601252156	-1.0724739452128	0.283507210526895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81050397723341	0.730937814817307
Merged-chr5-116012743-4	11.7562231381999	-0.833156441436031	0.593974755611058	-1.40267988422995	0.160712318430064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87183328779457	3.54590569381889
Merged-chr7-16426315-4	6.53929881277761	0	1.35798463720313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122948926-2	3.46637078895481	0	1.40975558547148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93967244-4	12.663156152639	3.12553819698996	0.736787286217215	4.24211744075686	2.21420766100936e-05	0.0017136251359922	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	4.34256349961316
Merged-chr10-7820386-5	8.73128489611635	0.238739910812706	0.705622544800175	0.338339403370842	0.735107433135594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65946941398048	2.28015692214866
Merged-chr15-39735394-4	6.53045327968205	0	1.36268246227019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120876398-4	10.0895166919346	0.72080690865226	0.618752674935736	1.16493542226241	0.244045133799934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96070466280571	3.39124183203949
Merged-chr8-83159150-7	16.0429825410395	-0.41007577937889	0.499517244173078	-0.820944189940323	0.411678058642044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16410171666186	3.29607236268289
Merged-chr3-52391288-4	6.06285835096672	0	1.37244403418867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56301977-4	4.4478970689331	0	1.37342124118427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44544241-4	6.45967057042468	0	1.35988581773217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157446545-7	18.0150555096685	0.252748370825435	0.457522365703457	0.552428448906153	0.580654843813569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00225265130538	4.28397395454684
Merged-chr7-91494443-1	3.71613391948744	0.00383653440593764	1.07173756476158	0.00357973307279859	0.99714379234956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2484890300238	2.20145723341397
Merged-chr19-24451009-1	4.09120150400077	1.24340189736539	0.963086341411342	1.29105963183245	0.196683000571468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.97033474894526
Merged-chr15-36935425-1	2.63250919600061	0	1.42167843162646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-70039112-1	3.38543161974917	1.31656640432453	1.2406230729633	1.06121386343382	0.288592720451204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62128842389662	2.25870292029118
Merged-chr8-13669709-1	2.56479121522015	0	1.45036050790035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9723449-1	1.52137549359021	0	1.59415343877966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150335315-1	2.62485724159815	0	1.47943789679313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84333079-2	1.92261010109518	0	1.68728269732309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80069482-9	26.6784050178705	-0.803764641116075	0.446303541316605	-1.80093717998506	0.0717127819773382	0.742662433893337	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27914760208779	3.50833934253648
Merged-chr7-80799390-1	3.5615317068558	2.78109544404272	1.16910597289512	2.37882237241142	0.0173680429099342	0.292837917041288	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.92460482503279
Merged-chr3-135200829-1	1.97331607719274	0	1.46641764225054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131077030-1	2.57486757400181	-1.37690321764351	1.31927188274723	-1.04368419857193	0.29663152291564	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	0.465515277017237
Merged-chr15-73505938-1	2.90235101114661	0	1.45263835466719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97881576-1	2.14567762993093	0	1.45399558701991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-114624843-1	5.40001108320573	-1.85105355464036	1.27407784307338	-1.45285750372613	0.146263322115966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr17-17648962-2	3.57365582443007	0	1.42193383544944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52525190-1	3.4453217050167	-1.6940216885721	1.82882574428087	-0.926289283639879	0.354295663556407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28522854980009	1.52554022439958
Merged-chr3-20295143-4	8.66729542870928	0	1.37372620184765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63590639-3	4.80637679982882	0	1.40787530976026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89264621-2	4.89745405604762	-1.53393049314693	1.21774369637961	-1.25964970930037	0.207795754812594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	0.71701424649985
Merged-chr4-147432483-1	3.48123942909706	0	1.4657187949741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107837781-3	11.8819034346455	0.155584310394322	0.595352237076189	0.261331528975864	0.793836854505464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48762807179304	2.99383062466364
Merged-chr1-165132726-1	2.80547890835817	0	1.40360294595995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44299501-1	1.66541468362928	0	1.51363014808105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125351809-1	1.88486501777714	-1.84290505980588	1.49416600329991	-1.23340047607547	0.217426387477513	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr1-161200095-2	5.53371725566748	-0.134082350154924	0.866268197467524	-0.154781568279783	0.876993522462686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21167959300009	1.56379394835609
Merged-chr3-8981032-2	2.82512889678746	0	1.41690380839948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4078473-4	6.28953332409716	0	1.40207831848635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117543569-1	1.96042294714176	0	1.44679501272547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113115523-1	2.4460866331085	0	1.48199798002173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-66180-1	1.97708737171785	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70874266-6	13.8395584641837	0.166023068491772	0.695995185572732	0.238540541563018	0.811461875055675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0292145465841	1.78499181917437
Merged-chr3-79161281-8	23.976831789141	-0.908256134885998	0.392380796188573	-2.31473136225939	0.020627638294582	0.327195153211317	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86689003102205	3.77758969841047
Merged-chr13-58512190-4	9.5146021051073	1.15279783160104	0.801405940750821	1.43846928626584	0.150300945965168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9094343094868	2.00283804667851
Merged-chr19-43521324-6	19.2831786234552	-0.0745350102760017	0.396239881858128	-0.188105775537982	0.85079373369291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15680708310539	4.02876909554076
Merged-chr3-69185369-3	4.65915948288776	0	1.37313166895715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35114177-3	4.59047278540674	0	1.39338258790879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-130987671-3	4.42021396844297	0	1.38116328354415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51663371-3	5.45544219820481	0	1.3902132328654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75739269-3	5.65910881874469	0	1.38929325586898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60757328-2	7.82556025101613	-1.05418847373883	0.86988462333515	-1.21187160395715	0.22556153344475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92293130141936	3.21317036810762
Merged-chr10-117078471-4	4.70567538540654	0	1.39195219509979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75511691-4	5.93701236151423	0	1.36722998935202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160093358-3	9.46718667947812	1.49891339116322	0.959498836946651	1.56218364571771	0.11824473217903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.95465925600843
Merged-chr4-88464792-3	9.58612906184759	0.413405553269419	0.680579313858233	0.607431852322701	0.543564355350514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90012233499004	2.79954500003179
Merged-chr18-49643922-2	5.30331431971797	0	1.39817149956028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44939509-3	5.99713989366176	0	1.44634715146926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32085772-4	6.06919667361456	0	1.35885868679002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65515108-4	5.14119373000783	0	1.39898606561135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91187667-6	11.6324605880975	-0.508122679780098	0.641948932438755	-0.791531310519899	0.428634012470797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78608253865023	2.41307516068939
Merged-chr5-103819874-4	4.4977307769878	0	1.37114685419082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72380857-2	4.70763199124087	0	1.36721835585801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134036111-2	7.34949854500555	0.0571420221552366	0.701580819103873	0.081447526214049	0.935086054174722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42866575664238	3.5068125749282
Merged-chr18-49990497-1	4.65421946526744	0	1.37215223670623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34258238-6	29.2099076992442	-0.109026459525588	0.449543333493621	-0.24252714121749	0.808371728837251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85256724011526	4.66746179805201
Merged-chr3-95654719-2	5.12120399846438	0	1.37637493851946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24420561-4	6.30616133578306	0	1.36489021814929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52119854-2	4.87871083792115	0	1.38429227713787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126928984-2	6.22649443926764	0.483636303894342	1.21728182589994	0.397308407637473	0.691140048158948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.02748994520012
Merged-chr18-66270847-1	4.33542311020743	-0.542232021373477	1.013474427783	-0.535022894025675	0.592634026348503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.02674429890598
Merged-chr6-32539279-5	10.8521229806394	-2.04623569605126	0.828151806160195	-2.47084614297809	0.013479379809733	0.247961288351024	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24672094980372	0.730937814817307
Merged-chr14-66811185-4	6.09148260740979	0	1.36373627090152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123848349-7	16.0885731050321	0.94093999433687	0.571587925489232	1.64618591887067	0.0997254874175017	0.909865352555887	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34857012394895	4.25268160535266
Merged-chr17-67244950-2	8.2612385215266	2.61275396665173	0.939703576097014	2.78040228122107	0.00542915967205647	0.131107814577218	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.04931717925843
Merged-chr17-87257661-3	3.33584249562876	0	1.43266422435194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45692957-4	6.5315744541609	0	1.36405462122461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136117256-7	61.4823757970464	0.137808479736228	0.2826115902097	0.487625010828369	0.625815476625676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.32230309992261	5.41532254953877
Merged-chr14-14686371-5	11.3353705135714	-0.421182101556614	0.628622860218168	-0.670007612211938	0.502852937613694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59259261975158	2.68078947292863
Merged-chr14-40904862-1	3.27568243258779	0	1.41157209338593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38199708-2	9.69631782996473	0.915571662715932	0.87434626788128	1.04714996374897	0.295030418428375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.51436894928421
Merged-chr4-134779492-4	8.67909269699351	0	1.35146566542278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108759914-3	4.54959248834799	0	1.39764038269312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-24621627-4	5.2920277195926	0	1.3863593885906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14197431-7	26.6995133728377	0.322344186447434	0.402390096885148	0.801073855799784	0.423088890551642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85671780618854	4.20514136251797
Merged-chrX-151496806-3	5.50643378708408	0	1.41027819197095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116464049-3	4.05409319229781	0	1.3701170497304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100048369-3	5.72318838591092	0	1.37092786954573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182959353-3	6.63080755846621	0	1.35880205214735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26753706-7	16.1044925222861	-1.13790196892605	0.481314480029381	-2.36415486369034	0.0180712567292757	0.299674645441471	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25280606659289	3.21508685909656
Merged-chr11-20914135-6	14.9752235050981	0.0237024909549599	0.567749531632158	0.0417481470866569	0.966699471570004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50300837523146	2.98127022288773
Merged-chr14-19986213-4	5.91833154586143	0	1.36647281471208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70693868-4	12.0424398947573	-0.634050768606012	0.515268688653212	-1.23052454489961	0.218500741445821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10067819634821	3.55530488981216
Merged-chr5-43672301-2	8.84526035687365	-0.697086711511802	0.746709996207686	-0.933544100188954	0.350539111901026	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30923017122179	1.41398715281163
Merged-chr2-120559032-2	4.30541164876695	0	1.39285549002144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20961566-2	5.55666897240386	0	1.36998771555906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60617971-3	6.74839649874694	0	1.37548274515292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19850886-1	2.43199140595351	0	1.43988580441702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36684260-2	4.5780646212852	0	1.41842189855726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126702679-2	3.63767838562251	0	1.41481743185303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-147125122-4	9.71412278525266	0	1.36259722794168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119483460-4	9.23482474286662	0	1.34908205087506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143041222-7	19.1430631863564	0.468020902657575	0.432643316837165	1.08177079003332	0.27935438894356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05282083714315	4.62121065741027
Merged-chr15-8633723-3	7.72749909689328	0	1.34746285404005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9881999-3	7.04596743417128	-0.112784211193758	1.18399266379892	-0.0952575253565189	0.92411027903943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	0.577068348605183
Merged-chr1-191278513-7	25.9488922851933	-0.439089745468509	0.312375569466224	-1.40564688275338	0.159829007098254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57111026960521	5.18227168982272
Merged-chr10-80571046-3	5.84779414167649	0	1.37436867952903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92056178-4	5.95940308465582	0	1.36671884892378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97868278-4	6.93586661830715	0	1.36126426967402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84091721-4	5.68714690775582	0	1.3623463172624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156725541-1	3.51672815338669	0	1.3879666155049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95672665-3	10.3197059531023	-0.129795467675878	0.666796469628708	-0.194655301261795	0.845662806877258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77561021306577	2.07833088992821
Merged-chr9-108710930-4	5.93185800284223	0	1.35911293981161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72694151-4	4.51129952665597	0	1.37289506940356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80215313-4	8.61890397890438	0	1.3555152390359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26342347-5	19.7165008461989	-0.945002630786307	0.475729895911956	-1.98642683360223	0.0469859495570783	0.565585335203497	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50405921695792	3.59449141056297
Merged-chr5-66090239-4	6.93875381345219	0	1.35801462394034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110379784-2	4.17409611671487	0	1.38287960975243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109463021-3	4.88082484546395	0	1.39213538709337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14087352-1	3.85328748447489	-2.51936059919071	1.18572892856854	-2.12473571192379	0.0336086718081999	0.455594461551605	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	0.376242425970964
Merged-chr9-32487606-3	4.34891855340483	0	1.36366130439437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70232108-3	7.50209356879534	-0.971943328914067	0.76512755372013	-1.27030234918136	0.203976951726088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63048732282332	2.06876131291247
Merged-chr4-106233490-1	3.41622415969931	-1.66580911074579	1.00462336372177	-1.65814291295651	0.0972886240466581	0.895295804054899	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05043424441622	1.18909650862134
Merged-chr4-32768232-3	6.06732688955138	0	1.37587247908335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124990485-1	2.95791949444818	0	1.39070342915234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94602782-1	2.69375194508611	0	1.41735097289197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82175002-3	5.30089537055272	0	1.37301266183487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117534073-5	13.8703259202847	-1.33035748005568	1.30861986149375	-1.01661110243056	0.30933847049561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr6-98332972-8	33.8478212409399	-0.32945042337306	0.360449657476267	-0.913998436507743	0.360717667247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60581143264561	4.32171508065601
Merged-chr2-43761954-4	7.68973027307333	0	1.36712384584802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101597911-4	13.5335281620243	0	1.34544072501924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118200058-4	14.0829798014714	0.304428181699595	0.529190630079343	0.575271299973605	0.56510782844503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27274575417535	4.1042569791941
Merged-chr14-21941748-2	4.17000208000402	0	1.38785850834278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60912025-2	3.55486079256773	0	1.41392910412617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101759459-1	3.73570310401799	0	1.41022108146235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161058704-2	5.10303450750294	-0.995895616714685	0.735249959827659	-1.35449938269717	0.175577110201309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71401670368601	2.0616452534421
Merged-chr19-43959394-7	25.6238532856275	-0.33444111804422	0.359308420680888	-0.930791205534386	0.351961579770205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51628912945347	4.07281091907833
Merged-chr3-41363553-2	7.6720674626367	-2.67470700556341	0.723741979156657	-3.69566376221553	0.000219313062836488	0.0112045477281284	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7385851556144	1.94919190003171
Merged-chr15-25563875-4	11.8739960017151	0	1.39807131592507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30733910-5	22.203588290121	0.381119126616001	0.655365666125264	0.581536608210347	0.560878852887107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26292282237182	2.70854053379962
Merged-chr3-133754436-1	4.04819582093231	0	1.37995132706884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61987146-1	3.81824440393567	3.01723459649474	1.37067238828682	2.20128064319289	0.0277161623359592	0.40219510635889	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.41437199749648
Merged-chr5-125074679-2	5.54226312123558	0	1.37387399750085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89643858-2	4.53344946916709	0	1.37919608937705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172368926-6	18.3056445303671	0.610952966628109	0.406020997883402	1.50473243948718	0.132392879454837	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88383405399404	4.38852966531871
Merged-chr8-70647034-3	6.02730440634309	0	1.36641565723608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117437171-8	26.923112428017	0.154651662568362	0.483527032627024	0.319840778556129	0.749089033203066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11671115861119	4.17497151923959
Merged-chr15-98957384-2	4.40656299494574	0	1.37138293224628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74029214-4	5.27434808777017	0	1.36186733590439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102385050-3	6.56416565034009	0	1.37439096406883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73566289-4	5.64775487019036	0	1.35765354552253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155140942-3	10.3549439482861	-0.727883219481292	0.646721850077812	-1.12549656300265	0.260378672838359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4129085652566	2.14941799930046
Merged-chr4-95001609-4	9.17531875695117	1.24174072362636	1.34898869525699	0.920497501567129	0.357312838038474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.71701424649985
Merged-chr11-8612271-3	4.24306489431885	0	1.53000098487945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132893092-1	4.06727602165825	-0.999106685080738	1.11143904859472	-0.898930702807306	0.368689572911172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11736049306998	1.39020008251549
Merged-chr10-20753076-1	3.06401829322587	0	1.42775780139969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191405347-1	4.55641770910192	0.656397679203198	1.02474887384997	0.640544913933033	0.521818399255986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	2.13566541716666
Merged-chr17-43512612-1	1.85700179114481	0	2.26108828862326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129809600-1	5.54782860525025	0.0892326520185906	0.725819511189366	0.122940552910143	0.902154172609313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5824508526072	3.07101851480709
Merged-chr2-58130233-1	2.79987920196804	0	1.60476446256639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31460087-1	2.92918696940599	0	1.42249022734246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100460917-1	3.05791223054602	0	1.41149299880204	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153262906-4	10.9904210214045	0	1.34443368193058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53443124-1	2.86655944147896	0	1.39362816827491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14129207-1	3.10223318566441	0	1.40219323227564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89989030-1	2.58501778595338	0	1.41438368041323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119453805-2	3.74018040871462	0	1.39134782427111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44199781-1	3.30171150794417	-1.86302606389205	1.13008986147353	-1.64856453226015	0.0992368799354754	0.906931141644847	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58328144429995	0.724326877898254
Merged-chr10-39387220-1	2.3660194438494	0	1.51450440071805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45070497-2	4.55912510584885	1.808551556784	1.3039045355595	1.38702758327929	0.165433352048634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr10-111068203-1	7.00632493425855	0.327111980286493	0.842564233835509	0.388233878380309	0.697842964231867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53388634203561	2.78312920923011
Merged-chr2-181411270-3	5.06614231882704	0	1.38948152182492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49497088-1	1.97241976797169	0	1.46615023311729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106236308-1	4.68047093409775	-0.299458465996131	1.07842600559504	-0.277681050384999	0.781257208344043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	1.02748994520012
Merged-chr6-29686159-2	4.41045682989384	0	1.44279929758761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7583351-2	5.79306105924424	0	1.38730406113188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83740676-3	7.79436636716164	0	1.38504416156903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58231949-3	6.89637137119306	0	1.38213426610298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103058406-1	3.24143425330641	0	1.39296815692732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-56808828-4	6.44606961589612	0	1.36337522615987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88235895-1	3.77790714093302	0	1.41276884143197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99183080-1	2.23364174225472	0	1.4570456236714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10010422-1	2.45175363282095	0	1.40333590716158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33962798-1	1.76252542557002	0	1.54332780564598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54767296-1	2.76869126273657	-0.89177122869995	1.34954123678361	-0.660795835201989	0.508743254078287	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94794910654401	1.30064958020929
Merged-chr9-70237776-1	3.42939443709452	0	1.38664547293689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22814850-1	2.72490859272357	0	1.43735250159103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48938406-1	2.54193441470828	0	1.42908829813759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-53018220-1	1.20323569928577	0	2.16092988055286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174675860-3	4.86549407077909	0	1.36041152036695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46793084-3	7.42437328609565	0	1.36191561012203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82976139-4	6.31433987621482	0	1.39011983167488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58504814-4	7.44854392279946	0	1.36328688244743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45275101-7	19.6436805082816	2.00018684592314	1.11332312757874	1.79659148038464	0.0724004979251887	0.747647923008232	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.897114879832661
Merged-chr5-129864554-7	24.3338659695952	-1.19893348470835	0.343597112721372	-3.4893584384703	0.000484181433020282	0.021010497040114	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62700926784906	4.46018922656424
Merged-chr13-46735989-9	24.1473774465797	-0.368018004769024	0.332167585538832	-1.10792871065982	0.267892605067939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04288079947207	4.72494942553835
Merged-chr10-22141054-8	34.8717371846602	-0.455839453071706	0.305959650242394	-1.48986787215429	0.136258980634176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.98824248288582	5.50846221203452
Merged-chr14-48131402-5	13.7556517531737	-0.776899494944716	0.481753117045761	-1.61265068653602	0.106820419848349	0.94984060872691	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45393425023669	3.05140206673085
Merged-chr14-36867173-4	5.63821766868216	0	1.36006122172309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87890061-4	7.98969670722907	0	1.36002304625418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4608018-3	4.10733271698009	0	1.38802757324447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77801757-4	5.16464681467491	0	1.41701482960647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70376355-3	6.29560220357192	0	1.35263016382061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4034452-4	5.79915497910423	0	1.40492800218612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11808612-5	10.5669809906321	1.95276140348834	1.02219740685548	1.9103564442562	0.0560873348421615	0.638447836034384	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.67285245412069
Merged-chr12-12269347-4	9.58511591015293	0	1.3933591206909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61968666-4	6.42336337752109	0	1.35378500248561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4618789-3	9.22496898282876	0.112310505735822	0.713349521885706	0.15744106120508	0.874897254792447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	2.25503889311583
Merged-chr7-68157612-3	5.80032220121509	0	1.35922393582978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139204796-5	11.4150680058391	1.27194774220702	0.710472874230702	1.79028332866934	0.0734083749674465	0.75447265170267	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	2.90060634753852
Merged-chr9-50965548-1	3.47619742026588	0	1.38606236820512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128392057-2	5.87207562907907	0	1.36945102148727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123023367-1	2.35600390727808	0	1.41487851468189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91312814-2	3.7554830414822	0	1.40147030549318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60962983-3	5.74583492621809	0	1.36117336543451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14816387-3	11.4649453864124	0.20839366883133	0.505050840706598	0.412619190059706	0.679885639235451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38735180703828	3.53064401677506
Merged-chr2-157373898-4	5.76337072039037	0	1.35816134715817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149206468-2	6.01319174137554	-0.0181410999910046	0.91000516484628	-0.0199351615702852	0.984095095836031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.56608458088645
Merged-chr1-16227862-3	5.05516409877619	0	1.36525511962371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57356314-1	3.11793626790038	0	1.39887053696528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125015953-3	4.67167301390798	0	1.37052769384612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96577390-4	11.5818843125532	-0.122934325559266	0.643492192660734	-0.191042450804187	0.848492334671137	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13691092425662	2.58132405424117
Merged-chr16-4587945-2	4.58775510682668	0	1.39433136318474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100604705-4	6.34967712339752	0	1.37039103326146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97009220-4	6.00032526981609	0	1.35305453778088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102664233-4	6.74118313275788	0	1.3689265878189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-929-1	2.8851565594918	0	1.97499402522231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103768141-2	4.87885584981588	0	1.37020967509046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57473442-3	8.53059935621927	0	1.34856775405205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106236474-3	9.17896326987314	0	1.38774279864508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-60345629-3	5.49571954873353	0	1.35938728435356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152763525-5	8.9158154687017	0	1.38246580668692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12957485-4	7.15445024124827	0	1.35883357745906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64300135-4	8.18225056509552	1.77564628791037	1.17518655604364	1.51094843518993	0.130801589106015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.44059547810395
Merged-chr10-42231376-2	2.79089055690288	0	1.53903215867707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70385044-2	11.3010129236205	-0.10710966343476	0.56125467043757	-0.190839683082289	0.848651197401294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26216812371567	3.42955699211978
Merged-chr4-105582326-1	4.14050774032704	-0.493049172295268	0.997007795392519	-0.49452890396023	0.620932698598497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83283749367074	1.91867065112601
Merged-chr15-58617303-2	4.35513709016042	0	1.38357278229925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3897319-1	4.77891510138364	0	1.41310400613665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170863233-2	3.0735397180187	0	1.41298887733264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47127237-1	4.98574480212589	1.96615634747197	1.34881218940928	1.45769467603423	0.144924720091045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr3-149084339-2	3.27560514893852	0	1.45910302324985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8714074-2	3.58458436755765	0	1.37284452390329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24131644-3	5.97993355358836	0	1.36026806515351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139578819-2	7.40371938246187	1.60066946326581	0.880506089006967	1.81789709719219	0.0690798620776098	0.726186854124307	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	3.60917108063528
Merged-chr16-87562653-1	5.21694739129875	-0.0233161722253427	0.899853826043108	-0.0259110663871597	0.979328273310517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30807038797559	1.51436894928421
Merged-chr13-119596909-2	3.86688151283798	0	1.45519054642051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128749670-2	3.4183918550801	0	1.41653072551773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99544120-1	2.62018897432661	0	1.45737376401062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168579286-4	15.4216463156631	0.0556356768373483	0.429610303002363	0.129502659616248	0.896959920605058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20778267426796	4.23651533849922
Merged-chr17-86232415-1	3.56103038154653	-2.86055026838787	1.34732168225066	-2.12313830176726	0.0337422642599677	0.45672204753675	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0
Merged-chr17-43055510-1	2.34905591602717	-1.80611350248448	1.34669659727389	-1.34114358508114	0.179873838659418	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0
Merged-chr11-63914550-5	11.8847117681102	0.576068379888033	0.513871343374662	1.12103620354642	0.262272452283543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17216837611484	3.65558968517707
Merged-chr10-7851996-7	26.6815866506291	-0.303307831832006	0.387199427066609	-0.783337501632793	0.433428946585744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52588877411382	5.17507701865071
Merged-chr5-138732016-3	18.4933218068567	-2.76289242122341	0.670088458386374	-4.12317565934007	3.73684504695147e-05	0.00260091113837689	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82782199061846	2.02129288408052
Merged-chr5-115897286-4	6.6104515100215	0	1.35758381730451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50107488-4	7.0327917830056	0	1.37379118485439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75716633-1	5.13090705842539	2.21184175047112	1.00660010625946	2.19733907906124	0.0279962386481995	0.405285628942071	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.00215713277005
Merged-chr15-84341198-3	4.31091512143062	0	1.37741344179357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135767692-4	6.5303422417316	0	1.36486433038816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-84569746-2	4.60371787883739	0	1.43050674906051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65678536-1	2.51556123900132	-2.53902313587226	1.30358564791165	-1.94772252973157	0.0514481728081661	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00182956598795	0.303163067301871
Merged-chr15-80899475-3	4.94419663972365	0	1.39456043746397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25320077-5	11.1820253057974	0.212365875626444	0.877165104144144	0.242104792613302	0.808698964690852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.30064958020929
Merged-chr4-102518036-1	2.71330031072212	0	1.6588482630387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50245216-1	2.13938308526862	0	1.53706430980401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108913047-4	7.62504020866848	0	1.35972876890697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114479938-5	13.3148956854337	-1.30720171185715	0.626424595567765	-2.08676626222244	0.0369092682255906	0.482760084570471	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15857388079295	2.18893016279325
Merged-chr3-82375435-4	11.000248751829	0.557268234264123	0.645164176555702	0.863761898931177	0.387718702234481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14242223062423	2.86609502053614
Merged-chr7-27409001-4	12.4040835875128	-0.333262176052936	0.51796582920743	-0.643405717637551	0.519960874370596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35054972753854	3.36617519472187
Merged-chr2-92037098-3	6.71336448203045	0	1.37709327163427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35792052-12	56.3981420856176	-0.00630822254355947	0.241527212966578	-0.0261180612572729	0.979163171176293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.30858102493993	6.31886639725584
Merged-chr8-108662904-2	4.41308813823655	0	1.39427431040164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33932317-4	13.6750618968357	0	1.35243905320181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138955673-1	3.46854955437802	0	1.37769924128403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64717633-2	4.02428606473518	0	1.40348014136337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71039325-5	10.0266899507212	-3.90018489823033	1.05058862492199	-3.71238066519133	0.000205318874700387	0.0106497411353419	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8460126076219	0
Merged-chr4-83234516-5	16.0935492873445	-0.478693850986445	0.604155372872896	-0.792335668075163	0.428164979436125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37490620789139	2.6245826567096
Merged-chr2-102867930-6	18.9207827900795	0.0380963488754292	0.458651151115284	0.0830617099353	0.933802471642713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02504124214365	4.03794826462831
Merged-chr5-92292764-3	14.6113039411196	0.350347413457384	0.428209822094081	0.818167625730944	0.41326147832786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88536780950218	4.23794641031667
Merged-chr18-80225060-5	15.889798147056	-0.437099278924246	0.489944267886818	-0.892140815953419	0.372317459952801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09623457674716	3.39622423972506
Merged-chr9-41102371-6	16.1025084207038	0.0895754201303867	0.512492173976517	0.174783976573447	0.861249379363585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99066107609785	4.1941557617931
Merged-chr15-63601724-4	5.41420933305148	0	1.36653498467884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76200761-3	21.9170252331993	1.09052797620159	0.440285516724925	2.47686543112639	0.0132541864448342	0.245062694202293	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2334626431245	4.40423796780711
Merged-chr10-97283020-4	6.75907590548842	0	1.35200382353928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38410019-3	7.45501150296829	0	1.40527631233863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103947065-3	4.59077008868362	0	1.38122213881295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35565647-2	5.38422307097255	-3.06792201068168	1.12038592119464	-2.7382725475615	0.0061762867103452	0.143171330186633	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84882240982172	0.465515277017237
Merged-chr16-10979601-2	6.50035586861236	0	1.36302224845278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-52426128-4	6.09695768876453	0	1.36101345034325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127272829-4	5.22563570197914	0	1.37296709530735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122685448-6	17.3640844849011	1.21525689777036	0.962469748148497	1.26264425464608	0.20671705608964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.76908672986905
Merged-chr11-45678881-3	5.63587093513782	1.27222530283825	1.33786859462926	0.950934425058987	0.341637665066141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr8-92998807-6	21.6917293976909	0.715160702932592	0.323347419360248	2.21174087100357	0.0269845747554273	0.395165543946733	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00071089559239	5.67079473727275
Merged-chr2-58042091-4	6.75076095801623	0	1.37066471005328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69586725-4	8.97110825519882	0	1.3557040877968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171826209-9	22.6610270300554	-0.306095486015844	0.33581908780055	-0.911489242677116	0.362037651046941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13092853835588	4.74979349830671
Merged-chr2-90496450-4	11.1504139031046	-0.646138118699654	0.839190054457579	-0.769954452233462	0.441326911616402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18607683658099	0.887876939341704
Merged-chr3-97278082-2	2.68526845884743	0	1.5240575231899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43975109-2	4.70045621813537	0	1.38917431210992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55355088-1	3.14686261633284	0	1.45149456408469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120935972-1	3.40997782530208	0	1.42991097554723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86694617-2	2.20512982728448	0	1.64435803006435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34060788-1	2.39129272986567	0	1.48882093179584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122273326-2	7.1332648365327	-0.0814494557078802	0.612411955286842	-0.132997821163911	0.894195103651769	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44571438143383	3.14082829040313
Merged-chr10-94336310-1	5.7036403909455	-0.803548587214107	0.760925221438926	-1.05601518332456	0.290961278133229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84973152037564	2.30417511455525
Merged-chr3-86103909-1	1.88184900588694	0	1.62853575125921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142759429-1	7.49318725292509	-0.279850444212668	0.732264025365197	-0.382171504428475	0.702334156706731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84681464190051	2.58356054143237
Merged-chr4-134082244-1	2.95290559658994	0	1.48018807622718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51250508-1	2.03466691483298	0	1.54224997454767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24036579-1	3.59800914930269	0	1.42228873876946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98894124-2	4.62013219365995	0	1.38202851174978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43920001-1	2.65778848346472	0	1.42554119096764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55985624-1	1.31033660965376	0	1.58164600231428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103009483-4	12.2249235672633	0.937463898044822	0.556482009286062	1.68462570649416	0.0920608084552957	0.863560567182298	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97976779392589	4.47683343527921
Merged-chr16-18396686-2	7.29321601132835	0	1.40591558341276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30216844-1	2.68412341910047	-0.607686847946201	1.29450819741056	-0.469434530551274	0.638759071249457	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.465515277017237
Merged-chr15-78300698-1	2.34882923299037	-1.0766644163322	1.38146783600146	-0.779362637532344	0.435766126375096	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr4-59816190-3	3.69052037834801	0	1.43741076219513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3172996-2	7.77233478972336	0	1.44750314031787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5892888-1	1.27407687354599	0	1.72321492833251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-37787641-2	3.37094959832921	0	1.41782621820846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7420350-1	2.54359658683332	1.83412026731161	1.31929392027425	1.39022869667309	0.164459441995011	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr2-154901960-1	3.31223720698869	-1.2374083145831	1.19547699385484	-1.03507497086418	0.300633900385805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56104072393284	0.724326877898254
Merged-chr19-53553000-2	3.3303258277116	0	1.50893569064683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63871164-1	2.08468205607565	0	1.47633724055115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108895183-1	1.54170152519728	0	1.61800126093624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94143469-4	8.11777888712527	0	1.35587132887552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80637319-3	6.8868290624474	0	1.36426588404129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97688956-4	6.99102452548905	0	1.3603515874943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41073631-10	31.7269406883612	-0.211018827668141	0.386393803136848	-0.546123736858702	0.584980884253425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0499661250345	4.84703456009355
Merged-chr6-146127046-4	8.47301253701837	0	1.37855206715036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69182586-8	22.6499361610728	-0.165102252546387	0.427069312400433	-0.386593575685397	0.699057114724218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26602220657245	4.14283222941733
Merged-chr10-120231901-3	5.08526504402483	0	1.37223374919064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97486080-6	13.1066152989938	1.72569905416852	0.759660693438237	2.2716708513086	0.0231063980051242	0.355718122107207	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	3.12657276652417
Merged-chr19-47651026-5	23.0492526444035	1.09070893697802	0.67748035879503	1.60994916357127	0.107408954827372	0.953403555757853	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12069662938216	2.70294085791168
Merged-chr3-95631077-4	8.85542679731018	-1.27491416162994	0.770295698743266	-1.65509707987459	0.0979048071396334	0.899139620088415	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34310688897156	1.30064958020929
Merged-chr2-121179019-7	13.9213494978029	0.757309177419039	0.527998791395803	1.4343009676538	0.151486394299857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42670276088062	3.77919219448397
Merged-chr16-37994833-8	18.9781339085827	-0.363758985305363	0.358409931085576	-1.01492440291369	0.310141864723478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66686506172752	4.45837466522646
Merged-chr3-10297400-2	4.40069913679695	0	1.37673904189636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79232257-2	5.31113052422619	-1.00155089017019	1.04988362944476	-0.95396371757875	0.340102008383927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.67591700901439
Merged-chr2-117852118-3	5.79638393851907	-0.925109362627644	1.19930040573278	-0.771374176316066	0.440485177073945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.600815099743027
Merged-chr10-40069464-1	4.51804184782734	0	1.40858541404073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19693187-8	21.3228240430924	-0.815302886524267	0.511202654210639	-1.59487217018307	0.110740824095671	0.968307815001739	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61370144809257	2.77667615692753
Merged-chr9-35183560-7	18.7910379410789	-0.0808972215403907	0.424983695129024	-0.190353706430621	0.849031971266303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96875355455724	4.0367460223015
Merged-chr15-67788406-6	23.6664976990766	-1.05033975147551	0.561234618995177	-1.87148068904946	0.0612784840502724	0.675803837388671	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34820378793012	2.94921590703857
Merged-chr1-91097872-1	6.98899038809677	0.233266395583209	0.62336560428623	0.374204790863149	0.708251959916953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74881841521221	3.58945887989429
Merged-chr17-31437195-2	4.79914961401137	0	1.38966287111384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117271720-2	5.07176224619116	0	1.37789416436214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64102748-1	4.90745854890158	0	1.37654667473329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112810529-5	14.6500319326156	0.7034595786241	0.640398066160643	1.09847236554215	0.271998278165529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4635411791775	1.86068676174528
Merged-chr6-117462257-3	8.49120396668805	0	1.35097154037083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62853465-6	20.9478237532743	0.692121929747297	0.521546551402767	1.32705686172355	0.184489873790303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76071477186363	4.03568482339425
Merged-chr19-38012427-3	14.0549519878636	0.476775086505374	0.659305823582884	0.723147088121294	0.469589522291171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44606266490874	4.70158629276976
Merged-chr1-94147227-3	5.43562907165424	0	1.36641636439113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17777181-3	5.94977098700787	0	1.38428418801374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98968192-2	2.79669873617514	0	1.50037047848014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23423267-2	5.81625707861115	-0.908681983891666	0.967931363024837	-0.938787623382701	0.347839794617739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05128027335406	1.44790810950236
Merged-chr18-69439553-2	5.50172807326318	0.258134792885088	0.741016072384837	0.348352488569275	0.727575479158748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	2.28072124323979
Merged-chr11-11812168-4	5.95098996621936	0	1.36492302806327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135699750-2	3.81627066167584	0	1.42926213313643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145161273-2	3.01877452177978	0	1.38833027211617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148075552-4	6.82898507948469	0	1.36080288081776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54993809-2	5.78646227808304	1.78039550886776	1.26520794512119	1.4071959599473	0.159369289303396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr6-108179267-6	15.7079780049213	-0.151852442498758	0.468679039808906	-0.324000925154819	0.745937333809891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90093003303133	3.66280700059506
Merged-chr15-73604754-3	6.60946921091458	0	1.4438353044428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27863182-1	2.51053267977439	0	1.41445353169425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60187135-1	2.05321927311638	0	1.56734828927162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53232603-2	3.7548015109446	0	1.40768715672572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31034933-6	16.2259395070442	0.259318276032198	0.538227506863773	0.48180048905942	0.62994768193338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52326642192598	4.05118387393016
Merged-chr18-78014818-4	5.93811798113291	0	1.35346421760754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36704910-2	4.81974988183845	0	1.378562036551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105963281-4	11.7432374004941	-0.662014500088477	0.594030945704992	-1.11444446602492	0.265088556214335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2549666937687	2.37780912716683
Merged-chr13-101842153-4	5.19850299686731	0	1.40736393251274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33914326-2	4.27253178426105	0	1.37318753392682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183804432-7	18.6741153000721	0.4103277960746	0.448041370781822	0.915825686718588	0.359758328652269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33667406152651	4.67114234406273
Merged-chr15-72549513-4	6.32397821984082	0	1.35329221031351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146416370-4	24.5363958168952	-0.393208123275039	0.548389493670681	-0.717023443762706	0.473359631250334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58158575508978	3.28275588133903
Merged-chr13-45267541-8	24.8884520007521	-0.00828454211747451	0.444422976134701	-0.0186411201993381	0.985127399351909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92394705673504	4.87365910936399
Merged-chr2-90631000-4	6.0356087109833	0	1.35502571940411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77719075-2	7.94413109315426	-1.63620726506141	0.743490799005428	-2.20070950070959	0.0277565957999086	0.402674350436944	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77929526303416	3.0500825975948
Merged-chr15-35917556-2	3.53088238999692	0	1.4371923440463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114793579-4	13.5241606573281	1.54301889435409	0.58704714228217	2.6284411987009	0.00857771836436568	0.181647473305588	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94407591329079	5.3231229840814
Merged-chr12-85467144-4	8.12041861852837	0	1.37579675657425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19856282-1	2.73707452533243	0	1.39115150224425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128084046-2	4.07673082912817	0	1.37871859790862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-26537876-4	7.43121060286651	0	1.35326435563591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11819504-2	2.45596520004285	0	1.43570635114749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112985987-1	2.69253205590749	-1.06334921840146	1.16323155415445	-0.914133746289575	0.360646572242978	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.67591700901439
Merged-chr9-110449065-3	5.73673984463008	0	1.36702901057745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51539806-1	4.21862415957489	0	1.40651486367102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100027990-2	2.34836821412498	0	1.56985424909852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139303461-4	5.24895745048712	0	1.36794557504689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111929501-1	1.93563151361525	0	1.43681405391317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116016500-2	5.46198735943275	1.82975024223097	1.43163493698283	1.27808437400052	0.201219677966456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr8-115638395-1	3.56669717261879	0	1.41447710697952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64287262-2	2.64764692062815	0	1.56867102322862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92000979-5	10.3087769380096	-0.656797654192103	0.621249335173801	-1.05722069546901	0.29041087680972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22955830519793	1.84558675562706
Merged-chr8-91051192-6	13.9643904098913	-0.281460782872785	0.640978120483568	-0.439111373505923	0.660580838378181	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01730859045106	2.50057466257326
Merged-chr10-8926466-7	25.5166993616449	0.171582657294471	0.304176143292784	0.5640897916485	0.572693025089234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.60255461160821	5.70731121531268
Merged-chr9-45243105-2	4.86062681281169	0	1.38695926186341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82464846-2	4.20960129977166	0	1.39312887207149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115793494-4	7.94042799311806	0	1.35863947841256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37333593-2	5.45833621154634	-3.11057457799569	1.15804279464482	-2.68606185572764	0.00722997027075473	0.1600871502843	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76901627090616	0
Merged-chr7-125484824-3	11.9326939045757	0.187260379696293	0.546334444260627	0.342757777151904	0.731780692745833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49542377306384	4.62294663603474
Merged-chr6-125595024-3	6.31456759217119	0	1.3693861776171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-63510698-4	4.45617650072324	0	1.3874734122423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88861679-4	8.17535304922807	0	1.34768377117948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74696839-2	6.10533895446748	-0.718551091059795	0.903498135701291	-0.795298919462694	0.426439641957179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14625477824554	1.18984215491549
Merged-chr1-191124030-7	19.8100205331363	-1.07132503128011	0.653812674824664	-1.63858100727002	0.101300550493399	0.917919090560203	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58215829023943	1.86575916392988
Merged-chr10-128186108-4	5.60198108986852	0	1.37951423711591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142598096-4	7.80068436019259	0	1.36928347530018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132079771-2	4.91672046707854	0	1.36403041819027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81812665-2	7.36597299849867	-1.29275014487559	0.801868183982688	-1.61217288663931	0.106924323578261	0.950343248101817	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92442664098059	1.47792296811651
Merged-chr16-10461374-3	4.20302449386289	0	1.36620929511058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40713333-3	10.4549991818917	-4.53705021942086	0.853591906916518	-5.31524512200488	1.06513844634395e-07	1.81504265845801e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04758444898918	0.723581231604105
Merged-chr17-45620025-4	6.27390238066278	0	1.36089398672627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16170595-3	6.06522756784052	0	1.35968386054894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102189665-1	2.20627711758952	0	1.50560615504943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148655155-4	6.51963519703885	0	1.36727648995196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73518109-1	1.42144210429614	0	1.68520165033995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59459089-3	6.31243387589043	-0.0900310995522112	0.999846543675126	-0.0900449175143266	0.928251520765011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.28067447403188
Merged-chr1-51938968-3	11.7158255547905	-1.80756030438169	0.583153138872793	-3.09963229877424	0.00193761022287721	0.060841931777904	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16444625121729	1.737158151675
Merged-chr17-47842410-7	14.9026570314559	0.425032113212471	0.471259138354686	0.901907419124841	0.367106049896546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14399599449285	3.9920311736989
Merged-chr6-72566203-4	6.2097333763339	0	1.35757190124964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71519234-7	17.2156888501947	0.256046256672303	0.470589698563695	0.544096603588629	0.586374997560382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95541954979818	4.20587260604041
Merged-chr16-36531795-2	3.88738729526323	0	1.4470142041291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96153276-2	3.91833102874942	-1.28923898403231	1.0164285993195	-1.26840093332228	0.204654808502564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92245040002336	1.08918047352118
Merged-chr14-13974908-2	4.06521312766851	-0.0800101901896699	1.19018042649716	-0.0672252613203778	0.94640237498423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	0.859510663435501
Merged-chr16-94618711-3	5.11748421625905	0	1.3647132484253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102499735-2	9.88624928124418	-0.854766546175295	0.731473661511221	-1.16855409996493	0.242583330428748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78568028115994	1.75754683437929
Merged-chr10-62311609-4	6.24305221335329	0	1.37114637863951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48523735-4	7.09254015743949	0	1.35836847475484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33375661-4	5.67945823246154	0	1.37626462904251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88072021-2	3.73426380711907	0	1.38984491475831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63590137-4	6.86632584263248	0	1.39308664878482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101595411-2	5.23527450237592	0	1.39177857850852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115392540-4	12.5499535403543	0	1.36565499712383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26779066-4	7.58570831341598	0	1.37268068346114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117180680-3	4.01513950086675	0	1.39703015448633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28593621-4	5.58628895829907	0	1.36439291665079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40757326-4	14.9211388146134	-3.12579128720241	1.04376487666463	-2.99472741139837	0.00274690204624871	0.079382694488056	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53362026845792	0.303163067301871
Merged-chr5-23826539-8	24.4269611681132	-0.745238536876961	0.360248769306368	-2.0686775372248	0.0385763564671649	0.49632477188133	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14583969951025	4.41180770822712
Merged-chr12-21393193-4	13.1577488431576	-0.722779500285431	0.463555860772105	-1.55920690783967	0.118947416406319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87729725397007	4.17916283495908
Merged-chr16-33820937-2	5.2474019225826	0	1.38288058601126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184791280-2	7.40213803094655	-0.286299511963339	0.659997091983628	-0.433789050650001	0.664441633425955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26414054591518	1.99353334941684
Merged-chr15-85012763-1	2.44001714544629	0	1.47343181331259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137898648-2	4.4819289586697	0	1.83053195916376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125243832-1	2.69658436532506	0	1.50207623343566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43868564-2	3.03517977279304	0	1.66151620393559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142272696-4	9.93896519674485	0	1.3574381772723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117061671-2	2.86836994346552	0	1.46203060022905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47258766-1	3.05193429434987	0	1.40982599318523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-40699024-3	6.34700896285857	0	1.3879790708047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51322636-1	2.17820478520262	0	1.55075320314294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125484932-1	3.01117275532464	3.42062941803063	1.20114665636134	2.84780330521239	0.00440221234281493	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.06695797389053
Merged-chr19-3622529-1	3.29489720944792	1.4056800130966	0.955751706361002	1.47075857018209	0.141356420300698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30944904015933	2.78425933247364
Merged-chr12-91665675-1	2.5079531922813	0	1.39862237340027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86437638-4	13.9325470370243	-0.345434895883465	0.493202313988299	-0.70039187993684	0.483682605912928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90718001450854	3.35594264659509
Merged-chr2-18952201-2	4.13464166126441	0	1.38993457596983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117428037-1	1.96001397552216	0	1.55748530097598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148980789-1	2.95742684792089	-1.31181802172817	1.31212362425839	-0.999767093188044	0.317423234248826	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73054899258335	1.02748994520012
Merged-chr15-61935704-1	1.6991305228472	0	1.52717790632351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119359571-1	1.81623701240401	0	1.5665324429038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49397899-2	2.58359330928911	0	1.54518868452446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89333775-1	1.5964749363844	0	1.49720884345455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55020004-1	1.77488882109346	0	1.62382045663019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52874929-1	2.47413982855206	0	1.46702354106381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53166657-1	2.11615491022549	0	1.50202297952019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95465698-1	2.319325349867	0	1.58525982765068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40918341-1	7.42483202378561	-0.882368811802386	0.701010721167273	-1.25870943932659	0.208135300703167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32677481415222	2.42555541244912
Merged-chr9-118486549-1	2.90474054208193	0	1.44590450359765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142858956-4	5.3161499375672	0	1.40019347123679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120256051-4	9.9713446920085	0	1.36457312406844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38065915-2	3.32685961498693	0	1.53548307312445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110660380-4	10.853998861889	1.19229234604413	0.777910229110774	1.53268629390185	0.125353167835285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	2.29469464705333
Merged-chr4-141762798-2	7.14893489807684	-1.46890836147011	0.75056579804405	-1.95706807490834	0.0503394652778571	0.591896622686416	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90313252923256	1.56163052678955
Merged-chr6-53713383-4	9.14907661639684	-1.78647404315326	0.935621571112443	-1.9093980924672	0.0562107566821391	0.639104899076427	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11480110409737	0.724326877898254
Merged-chr13-43554826-9	33.4168651185514	-0.31296484464318	0.337324220296559	-0.927786461250948	0.35351834826555	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07336360827939	4.83301807162092
Merged-chr1-183671588-6	15.1897249894323	0.344164175387138	0.661114726218356	0.520581620312396	0.602658255764507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	2.16080982730713
Merged-chr1-149958092-4	6.95818945546084	0	1.37583018387711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8926762-6	13.5710195654538	-0.918946731652103	0.567899474006768	-1.61815034828004	0.105630200223009	0.943468953980045	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30710152728353	2.78597213134036
Merged-chr17-84935777-4	6.36322855600127	0	1.36715906524312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30717500-4	13.4338736115443	0.147801654438621	0.69534143458447	0.212559826133396	0.831670309406646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94985701881947	2.1893145161846
Merged-chr11-111227474-3	6.47531734298853	0	1.3611011173811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90212976-3	7.3752986856226	-0.711818217213311	1.05942229614646	-0.671892804033362	0.501651941805537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.903978167044898
Merged-chr2-102290230-4	6.28205240860737	0	1.34924630219377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84946179-4	7.38735450551399	0	1.35709155426549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47241537-3	12.5741047953569	-1.60199253778883	0.611443047847296	-2.62001922080716	0.00879248111458153	0.184465642959297	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0114150546619	2.60108827844698
Merged-chr11-120237388-3	6.4311381025415	0	1.37171114729798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3647757-3	10.2847017142248	-0.433636413492872	0.583688458626823	-0.742924426693374	0.457527436084647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4856628864038	3.05372613618122
Merged-chr13-41572196-2	3.83008419123306	0	1.41544526504958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76742467-3	8.97365088276637	-0.253459202445461	0.641713426655293	-0.394972571738959	0.692863130292758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86572735051143	2.67284965511961
Merged-chr9-32855794-2	4.28754861813859	-3.50000197500888	1.22194514641897	-2.86428730885833	0.00417948730633352	0.10870466530382	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98485448024296	0
Merged-chr3-20509389-4	5.71838687004013	0	1.3834921520801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163698249-3	5.17961952015458	0	1.36647659743849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165927556-5	9.0766177215244	0.575850309986885	0.79300249937149	0.726164558678298	0.467737895956868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.04573834211022
Merged-chr7-34305566-3	3.99463660549618	0	1.46236178210588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135018232-3	5.4738955902459	0	1.36787316786669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68951988-3	14.6764762906017	1.43987877960256	0.580470171763781	2.48053879362558	0.0131183988051567	0.243462970518782	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74041655994538	5.30051041589088
Merged-chr10-51435875-3	6.12577524332483	0	1.3686400475642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83185392-5	18.8094534588775	-0.432750362891283	0.504410285676768	-0.857933264209038	0.390929314940096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41140728038355	3.87980880999628
Merged-chr10-63377650-4	9.54442221945585	0	1.35472946516595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95758628-1	2.57920483854551	0	1.42037697085533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11411918-4	6.11580645506043	0	1.37754249417967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14239663-4	8.36210740646046	0	1.35459674177831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41402030-2	4.90731218411529	0	1.42299074373097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67966354-6	20.0912445838272	1.56119819024996	0.409014943662966	3.81697102865857	0.000135100026679317	0.00754768997971324	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86944770730881	5.85790032186136
Merged-chr12-34433590-3	3.84022733520907	0	1.38486871059055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5221949-1	2.69227569184381	0	1.46140471164127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11765429-4	6.63816168234977	0	1.36839560829967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-59234657-3	9.66006245893255	-0.0782679819598261	0.703661051327492	-0.111229663503713	0.911434229502438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99529989251982	1.94375739754678
Merged-chr5-90746366-2	6.62324941004551	0.0623387982039135	0.764394103480304	0.0815532170121191	0.935002004724089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42139546294927	2.1304360554358
Merged-chr12-40538491-2	4.02860548463455	0	1.37777700185336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51742968-4	5.68457183542305	0	1.38834863820965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13073216-4	7.21406665262377	0	1.367980668926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116586980-4	5.87676730729733	0	1.38185281917962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43512952-5	17.2430294214305	-0.493001809178833	0.431815404142749	-1.14169574417465	0.253580510439854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86530631835026	4.70672871892104
Merged-chr5-108248710-2	6.03213857928774	1.76469133584848	1.07885294636723	1.6357107257209	0.101900143639109	0.922276041971084	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.85699717634292
Merged-chr4-59822278-4	8.26492170405764	0	1.35802847048259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125548624-4	6.89091196369805	0	1.37731714844734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47587958-4	17.0134281694501	-0.627316958820296	0.43727724468073	-1.43459776709469	0.151401751268265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.511047628941	4.03673467049256
Merged-chr5-99297383-6	12.8104310071619	1.60149421522842	0.754031604872839	2.12390860658752	0.0336777865803883	0.45620499383729	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	2.54704962671647
Merged-chr18-82470223-3	5.94631003474885	0	1.40054027489861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60315987-3	5.78328518053219	0	1.37719804559337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118489819-4	7.68226557965323	0	1.35600707296759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71662821-4	6.35710924688457	0	1.35579165661744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116437150-4	6.6280164526157	0	1.36494363459338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118564703-2	4.57364416191476	0	1.39993397715221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36779767-1	2.09737613075356	0	1.45819355824344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95801629-2	4.89748161301707	-1.48229719115162	1.00729321450294	-1.47156475374758	0.1411384493443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50676710473245	2.07771909425719
Merged-chr10-117124709-2	2.55148692435569	0	1.43621567430528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25538360-2	5.25532600181189	0	1.37977078544699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62048950-2	2.17201179298606	0	1.87741444161229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57513871-4	9.50527986663218	0	1.41340337330261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89210955-1	2.36282762667135	0	1.45053755663558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43955620-2	9.27089642639415	0.148612424665273	0.712944527867129	0.208448790693249	0.834878563429738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46954145756221	3.01966504370777
Merged-chr4-120934087-1	4.93272046953089	0.325545340066995	0.859518962369462	0.378752947078159	0.704871331340436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.52633957112176
Merged-chr19-24146237-1	3.90433468941873	1.54162568930365	1.30026202584625	1.18562694184683	0.235769657696338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02748994520012
Merged-chr4-115980862-4	6.52895640666593	0	1.35762330729561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73057036-4	7.45552080486183	0	1.36089902954674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86802939-1	5.85678706566559	-1.01287465043088	0.620709407080201	-1.63180167543363	0.102721272274746	0.927237734902514	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44750359419753	2.57812733526085
Merged-chr9-111122419-2	3.59380612767935	0	1.58909894807643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81536097-7	27.0444335453082	-0.302079793182342	0.412951823221547	-0.731513402279562	0.464465621331992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29479415505059	4.13478399001175
Merged-chr11-69691184-2	2.78729694498083	0	1.4452213042006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8429984-2	4.32064397196035	0	1.386289827958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24697798-1	4.29882755414044	-0.381782110747173	0.905092248095164	-0.421815689561658	0.673159552804655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79257770822194	2.06621232759638
Merged-chr8-125487204-7	26.1269848327192	-0.66196360985442	0.523853886019533	-1.2636416900222	0.206358662803312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00040769014949	2.90568011711892
Merged-chr11-67975189-3	5.22784117737319	0	1.40033588784033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22889555-2	8.50726604047628	2.46481483730972	0.636039914441853	3.87525182200662	0.000106514489675377	0.00618592002592286	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03280651306513	4.45367496361907
Merged-chr2-170327008-4	11.1733180171744	0	1.37692898421339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20142719-4	9.58458555784533	-2.52794868545306	0.699250840907599	-3.61522437666558	0.000300087598162967	0.0146300105368078	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12558586085945	1.4068548238317
Merged-chr13-59842326-2	6.10695771555484	0	1.40228108815708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148810659-2	4.3726698480437	0	1.38728450183278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102810219-6	25.3735160435564	-0.353297012081595	0.55051593863935	-0.641756191391661	0.521031498270132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.62027953253939	5.31000640895046
Merged-chr4-128957417-4	5.84139528785884	0	1.3600292982657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132946831-10	34.496711473311	0.162249154599606	0.282660743653263	0.574006678474729	0.565963281968207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95353478782629	5.18316208540596
Merged-chr7-30654540-2	12.5466476486628	-2.17104425712558	0.650576447727849	-3.33710859762599	0.000846548637480687	0.0316054515005581	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18272955917648	1.91557369590641
Merged-chr3-144982845-2	3.91629400698834	0	1.39044359684973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77831498-2	3.97408946256008	0	1.3805463040195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-11664739-4	10.1748777948076	0	1.35113356558757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124668679-3	7.58323884669463	0	1.44516824796104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3835105-1	4.01764113102913	0	1.42854087998301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38952655-3	5.65211989849691	0	1.37337787512203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77772951-3	5.18470673662174	0	1.39077458867544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136151043-4	13.3689694350896	0.129678943454068	0.798244320266709	0.162455203452922	0.870947402066939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46486482462982	2.04190387384795
Merged-chr7-101571067-6	15.1887174484083	0.568513978930122	0.68593677158879	0.828813970146711	0.407209681852558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	2.67898613390668
Merged-chr9-32940597-4	11.899619086435	0	1.3409728030624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68208030-5	12.9801885183849	-0.734192548110974	0.599043186020959	-1.22560871276697	0.220345957513619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44831032352418	2.76633140343468
Merged-chr8-26768370-3	5.03289765724369	0	1.36912138633669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102240231-6	14.3183945098561	-0.131839765898339	0.483096017663822	-0.272905925691328	0.784925531325882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28743418612999	4.28932751774763
Merged-chr2-77268732-3	6.33093250408973	0	1.40598522981693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107950816-2	4.08064467137257	0	1.38876154075577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11215416-4	6.04960015801172	0	1.35656670177474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67369821-4	7.77363313045298	0	1.38671855615682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49777611-5	9.27774503164108	0	1.35167452452826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131754961-1	7.37830650283541	-1.05061742115276	0.928523475092632	-1.13149257863184	0.257847825290697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89798359119731	0.882176137820124
Merged-chr5-114915911-5	10.5550209341949	0.172316382890303	0.739266686495626	0.233090961676011	0.815690773166162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46659948626382	2.74914625156584
Merged-chr10-89406974-3	10.7437343127432	-0.414910194155512	0.65959567801928	-0.62903716319285	0.52932472657503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4356777062723	2.73901823829421
Merged-chr7-67551469-4	6.24829468399834	0	1.35516524315877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96593784-3	4.75465012896098	0	1.38491045739404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114785565-3	8.56725760390397	1.04698584126671	1.26963327399693	0.824636422744888	0.409578036494943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr3-84674897-2	4.63557675078088	0	1.38690653986145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115480269-2	9.09990455114086	0.892257405981367	0.77520909228872	1.15098934578679	0.249736618700406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65215194967867	2.63003866658861
Merged-chr18-62191690-7	16.3851377973981	-0.0583519039537806	0.511598364392936	-0.114058034612798	0.909191788589145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1726234347789	3.68898023028823
Merged-chr7-102204691-6	14.4943291761629	-0.721921191643635	0.532162108997278	-1.35658134887489	0.174914271310131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48141459347113	2.46493914150125
Merged-chr3-146345387-7	18.8675550555026	-0.791017416626746	0.492764229208632	-1.60526549968349	0.108435388268555	0.958601280027707	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40302381505339	3.43525155980981
Merged-chr12-32893418-5	15.212438478889	0.218397414657789	0.511458832710047	0.427008784852879	0.669372929144652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49327373526118	3.62860933615723
Merged-chr15-28395871-2	4.54166560712911	0	1.40486241846527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146772183-8	17.0696685582458	-0.275999338726822	0.394881683281372	-0.698941861352834	0.484588365024647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17196016076445	4.05502404817735
Merged-chr11-73109301-3	5.93891415730709	-4.20416812895923	1.09005694769473	-3.85683347815018	0.000114865355906797	0.00660737130342599	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53127161644371	0
Merged-chrX-7733912-4	5.22378209339837	0	1.36471005070717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79558034-3	6.74016225027174	0	1.37368101952317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75564229-10	34.2266072421064	0.450481568853188	0.33930196015707	1.32767157797925	0.184286626876968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77542667881787	5.19076808190718
Merged-chr10-98831671-4	7.24960846748066	0	1.35658893893329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40644927-4	10.7140106467475	3.37719183293061	0.831038005499755	4.06382356833331	4.82753217970523e-05	0.00321592918819359	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	4.29353305425072
Merged-chr17-40709003-6	18.1515677827948	0.476529384873572	0.390428666820435	1.22052867878356	0.222264524631216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36494468520548	4.82832291486054
Merged-chr12-25164972-6	17.1590220036509	0.461675982777299	0.519888919006385	0.888028126584536	0.374525621919308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9005419201332	4.65260202992624
Merged-chr19-22073742-1	4.26143380098045	1.97680614674399	1.37932192511047	1.43317242389638	0.151808568249941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr2-118963133-1	3.40694730349984	-0.253798637177902	1.19580303860017	-0.212241170983312	0.83191888851572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53823966306787	1.4965005622044
Merged-chr1-60627234-1	3.24657871520395	0.209057630133685	1.35471573233049	0.15431844861951	0.877358651658572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.723581231604105
Merged-chr6-38500251-1	2.64917853951836	0	1.42572508094839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118125613-1	6.61360049758438	-0.248728969213426	0.703792360581679	-0.35341243120038	0.723779267615672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6922775377882	2.91251139439735
Merged-chr10-98805237-3	5.13743525112267	0	1.39733804918473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3799809-3	6.45418787433383	0	1.3762189215892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59522949-1	1.43382124659516	0	1.74147767506486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120170478-3	5.58294899502181	0	1.42414172577142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59350708-2	4.34630336505448	0	1.39773002265459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97590892-3	6.54737851584067	0	1.36978132173446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41377076-1	2.70457953054008	0	1.42507780890438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22054528-1	2.46431066876338	0.264877043357719	1.48179880314768	0.1787537166281	0.858131088617755	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.71968126597395
Merged-chr3-41452209-1	1.42760966587491	0	1.66972955837588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53567251-2	2.93510356271581	0	1.4910116581478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-94078503-2	5.05857732054945	0	1.41334339200695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116999816-4	8.51017928893886	0	1.37391428083228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32069119-1	1.46152641029387	0	1.75450866710825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48680818-1	3.42856523493227	0	1.36921490797397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102801708-6	12.7561931526525	-0.879028609199396	0.592071973096567	-1.4846651237383	0.137632554801412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59890913171288	2.49235560389311
Merged-chr1-89302706-1	3.05469659769615	0	1.4013295182682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59820464-1	6.32795681568152	0.501694422526053	0.954472564370028	0.525624770427196	0.599148942698185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64538595732494	1.29741062002251
Merged-chr14-25707838-2	3.74090990696141	0	1.46173606342941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127603919-7	19.1535680615268	0.173874343571782	0.447114298428095	0.388881197007266	0.69736403215088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56422214750977	3.70171291894842
Merged-chr6-54082758-11	69.4274779162346	0.269981390937078	0.251175934440819	1.07486965874388	0.282433087836433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.45506420461063	5.75723837942731
Merged-chr8-105331731-3	4.3318929362474	0	1.38841202685641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114778357-6	28.5354331029206	0.450069753331699	0.434063799794396	1.03687465654792	0.29979427648166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27042561247166	4.69938403713045
Merged-chr8-117294631-2	5.5282469644882	0	1.35764418042074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77526454-5	15.0918466805371	0.563922142760472	0.494478185308113	1.14043886973313	0.254103506893854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44520488778582	3.8450837223943
Merged-chr11-93941099-3	4.26183503780006	0	1.38945341504877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64089428-3	4.82181207510585	0	1.39677996677574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44919087-3	8.94068183762553	2.43397874569224	0.685500361252138	3.55066004815275	0.000384266414500099	0.0176272894732581	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1358769354856	4.88548575272294
Merged-chr4-136889232-2	7.76533450187503	0.543552475906318	0.686155930531818	0.79217048446266	0.42826127611556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46092753114612	2.64589293845526
Merged-chr12-34432046-4	6.52844151723085	0	1.36838897155693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12010111-2	4.67892477552762	0	1.40353497443578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60609619-3	4.69914943391122	1.19560421073649	1.39381162989641	0.8577946869516	0.391005844060891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr10-118101287-4	5.35414637681282	0	1.36333535802947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68509327-3	3.94961699804435	0	1.40167198749947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89236334-4	8.38688460005205	0	1.36250688740117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64100654-4	4.43275969317724	0	1.36006510714996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50134492-4	30.5579358219749	1.56207008153145	0.43344072511795	3.60388397076987	0.000313497049830912	0.0151076118189349	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74939533372789	5.20212409926065
Merged-chr1-144406824-4	7.08813845325562	0	1.35720316815924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25216954-4	9.98964781086726	0	1.35048949304987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121832808-1	2.89716628798045	0	1.40609130114655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-3840081-2	3.33887270443914	0	1.41889054603509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179488178-2	4.47998974838861	0	1.37953176407279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149143771-5	13.839823515526	-1.09284674837017	0.526055132324571	-2.0774376699663	0.0377611824452322	0.489545280322745	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41114084420901	3.20784378772857
Merged-chr5-32139744-9	25.1618139090702	0.21518312542473	0.423101729777559	0.508584839721313	0.611043257631327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34159868685398	4.52002129997062
Merged-chr4-139230932-8	26.6160637213719	0.974515511355681	0.370139479568548	2.63283320247714	0.00846759202921936	0.180152577344945	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20358772142727	5.21664329433868
Merged-chr1-192763128-4	10.2994154621604	1.90950751248382	0.846350095400111	2.25616742156932	0.024060148007195	0.364719906727025	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29281866668399	2.97771010202329
Merged-chr18-36771474-5	22.4509338996607	-1.88804543938863	0.561218940727872	-3.36418695516572	0.000767695202648763	0.0291826178467022	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52266155503661	2.20225658013615
Merged-chr1-77281887-4	10.743516085382	-0.34310621518786	0.829822752978965	-0.413469278778088	0.679262826074779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54005559410044	1.77929101765279
Merged-chr5-53415642-1	3.13416815946161	0	1.45226546062296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55700633-3	10.8555006207749	0.155873741314575	0.929379395493326	0.167718094537522	0.86680506045166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62635771927786	1.39284430389808
Merged-chr9-40238492-1	4.66458859446739	0	1.41873016838539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101830753-4	6.22423356188762	0	1.38246404274032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144930525-1	3.41275330099319	0	1.4024373486731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29624004-3	4.76560333116588	0	1.367914982778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50816723-3	3.93385957534074	0	1.37398849799365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12467702-3	8.22815438110067	-1.01622957053998	0.917789695934603	-1.10725755044039	0.268182591827644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40895879949083	1.38572824442771
Merged-chr7-79878008-3	4.62871906305463	0	1.36616802244042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68171672-2	8.31176725933571	0.843011861086875	1.2287556829316	0.686069552146927	0.492669250122185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.02748994520012
Merged-chr2-128226833-2	5.14656019037626	1.62672093759197	1.24207852075214	1.30967640967409	0.190305327304851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.48988962528534
Merged-chr6-21955534-4	9.76716212510721	0	1.36505203612293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63965572-2	4.75904458775615	0	1.37510999890184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51854168-4	8.62718215834755	-0.51889752970036	0.744642203187314	-0.696841419247134	0.485902041966607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44127359165182	1.51200022066271
Merged-chr2-158121754-4	9.2182506166788	0	1.35688391436529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60797175-4	12.5577615901759	1.43346889288118	0.527212966852365	2.71895606331434	0.00654883063562758	0.148575911737095	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1819016518161	4.57689849268239
Merged-chr4-97910571-2	4.75906610914807	0	1.36612743114681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45033390-2	5.88336661504085	1.04917151881579	1.28680681397799	0.81532947091912	0.414883743726936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	1.20027794713453
Merged-chr3-83817818-2	4.2899090359584	0	1.39458144623322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90242047-4	6.07906640705323	0	1.35926952962146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146479345-1	8.0097696032552	-0.347139088286563	0.616984014485696	-0.5626387072215	0.57368092894919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06838422124566	2.49521342937108
Merged-chr17-26505463-5	12.918786721095	-0.610674573194008	0.563390722704293	-1.08392727921175	0.278397043335831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1582959608892	3.30459792214267
Merged-chr14-52004355-9	21.5905827115452	0.549716158511323	0.458348883676518	1.19934001824533	0.23039576045752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12500985376209	4.19382067896055
Merged-chr19-24987543-4	12.6484396955877	-0.38705296225008	0.479620072965388	-0.806999089627367	0.419667007647683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96381484334041	3.62081791936078
Merged-chr9-115805466-2	4.17084984387669	0	1.38556107687882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46473931-5	19.9482820230827	0	1.35719902856955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97222232-3	8.93539291802429	-0.278445675840798	0.895285378154036	-0.311013317803668	0.755790497236365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85144754364776	1.40024388691264
Merged-chr7-30336606-8	25.2147606743031	-0.255354588994648	0.402665630437082	-0.6341603794629	0.525976161542435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.55239670564514	5.13847395179107
Merged-chr3-79789110-2	4.21719280914444	0	1.39727006782457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104750075-1	3.61989107121519	0	1.45349484852961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191950489-5	13.6316523070337	0.0180100847084242	0.42534801173939	0.0423419981082666	0.966226065641068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27927587552024	4.39731091768572
Merged-chr2-27416734-2	3.24686246853271	0	1.42643771229127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112004352-4	6.86291288701802	0	1.35879384859432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88284397-2	4.15493332299297	0	1.42975946804161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115036519-1	1.92202195439206	0	1.44759270148321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9530621-1	2.41600443206463	0	1.460154838753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9834369-2	3.71115363482748	0	2.0367244505726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21854647-3	10.2832584709236	0.744124819140668	0.788892030655017	0.943253056470632	0.345551481038559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97064387445282	4.34592106153157
Merged-chr15-100403482-7	16.573588535294	-0.021780512358237	0.42338065804377	-0.0514442782031512	0.958971502558245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91086887157224	3.90122067105386
Merged-chr1-156860008-6	21.1009054769135	-1.14171081101318	0.453218316927175	-2.51911886252522	0.0117648933677792	0.224750333256311	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14483791945944	3.35807668565803
Merged-chr1-157019510-3	7.76645748661885	0.530983114861068	0.752106548635791	0.705994537375312	0.480191534551008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96027510505613	1.77929101765279
Merged-chr8-84469905-1	5.70724863360457	-4.20940641921706	1.11878735066571	-3.76247230245528	0.000168241945516948	0.0090014408625549	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06103001569182	0
Merged-chr4-101328820-4	6.56614395219784	0	1.3696169956282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3665551-3	6.23816269773209	0	1.35502628258531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73078795-7	11.4116333293593	0	1.35306509551186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64364449-8	21.1178933452125	0.131919368823884	0.473203427673219	0.278779402491953	0.780414122467916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60410097068362	4.74472374530822
Merged-chr8-72152102-3	16.5214510712456	-1.90758996254525	0.795451592866456	-2.39812199718042	0.0164793756263256	0.283661298186015	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92027594280124	1.06633037676026
Merged-chr13-37658736-4	7.67189267962215	0.149396166048385	0.751063283490811	0.198912887012686	0.842330888571426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	1.67735121185591
Merged-chr11-69266478-4	6.02144870574075	0	1.35426137016104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56115330-4	8.49843498127107	0	1.36271413390635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80382785-1	6.63588038118225	-0.996972448451502	1.05492562448593	-0.945064206718202	0.344626097497994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0556637270067	1.86479359409142
Merged-chr6-31128036-3	4.82993084802943	0	1.37469797349157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38650753-3	4.19522358050324	0	1.38851547898845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111461531-1	3.14648393083901	0	1.40989874138169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60435139-1	4.85531274429311	1.17957558126208	0.881209728588871	1.33858665308995	0.180705273534326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.19776446004195
Merged-chr4-155710830-1	6.97810029167777	-0.0361255011180987	0.692946483652575	-0.0521331761836474	0.958422578127782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35455731442812	3.31997089138504
Merged-chr11-30209768-1	2.80982069903637	-0.680350136225492	1.5069473339715	-0.451475722401297	0.651646718767104	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr7-80191635-3	6.55015323006305	0	1.36948613870215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68236489-1	3.34131298891838	0.325327244332691	1.25397343266909	0.259437110753	0.795297999390038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.41478649953382
Merged-chr10-121458735-15	46.8765104381646	0.514397592271248	0.328486168609985	1.56596423663122	0.117356989908757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35645521955935	5.90086463913167
Merged-chr5-21213118-4	8.49037485297534	0	1.36270088475428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124775876-5	20.0334441313082	-2.43758624917684	0.569786207065116	-4.27807170295062	1.88519300455396e-05	0.00149820477389691	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67603199701397	2.07866521149569
Merged-chr7-96730553-2	4.45477660757074	0	1.40354280026157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117982724-4	10.6645719818084	-0.255382278174484	0.55299710909128	-0.461814852150212	0.644214099184786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49150090948888	3.29878867846454
Merged-chr19-45650079-3	8.4680743890496	0	1.41269318446963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46848360-7	20.0825722026235	0.722149013933136	0.417927512964131	1.72792886692558	0.084000978193586	0.817667284292425	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7484255461783	4.53176017587065
Merged-chr14-54368071-2	8.32567761347985	3.59888680046889	1.04179917122168	3.45449190197435	0.000551330773212901	0.023107008096438	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	3.17864761205025
Merged-chr9-45095315-2	4.46144980715786	0	1.39394508551461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92318770-6	13.4183719240373	-0.0891509521363585	0.622362325741013	-0.143246061737769	0.886095852889526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51742061429114	3.54798936995649
Merged-chr9-14725224-3	7.4848511131267	0	1.39381043956598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59772947-3	13.1779229393196	1.46657490002813	0.708479257147579	2.0700322348642	0.0384493259131648	0.495511357826867	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	3.27011673741912
Merged-chr4-148655200-6	17.6501403794915	-0.100161490181509	0.433150308278374	-0.231239568037287	0.817128692024339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88935106994302	3.93196350828481
Merged-chr8-120725465-3	9.75589492741695	0	1.38372577988704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126658575-4	4.74862795293068	0	1.38850771225656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82846272-5	14.3884323245542	-1.69832631906981	0.614454271813738	-2.76395884441769	0.00571047413266195	0.135908784315837	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52739244615966	1.91539609430116
Merged-chr1-120019592-5	16.620862321815	2.35475890117819	0.557393657409079	4.22458861861429	2.3937764396842e-05	0.00181553673131226	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38658767833973	4.50646281796112
Merged-chr15-35147032-3	6.71261572350251	0	1.38871564800996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105710172-2	6.97326219553075	-0.262233848210634	0.869116167048276	-0.30172473847914	0.76286190809071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	1.19104000664357
Merged-chr17-27051769-4	6.94207974267833	0	1.36009349953742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41522926-4	7.67033370219188	0	1.39360874566163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181256407-4	7.00740450871975	0	1.35334323198526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88831686-3	4.95524943251135	0	1.40639932761722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91359561-7	22.9059031447935	0.193035237234599	0.488968926109753	0.394780172986434	0.693005128584251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23597034622883	4.27464200969189
Merged-chrX-94616751-1	1.42635481870094	0	1.69321883211977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10380208-3	5.4412105683008	-1.82690596068791	1.36567348358688	-1.33773261518531	0.180983614997786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr3-109264711-1	4.42941437077468	0.35197811702525	1.20447011869187	0.292226524812024	0.770113432447468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.02674429890598
Merged-chr3-41260240-1	1.2824818520064	1.51723436275422	1.62375151585715	0.934400582809188	0.350097297228132	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr6-94532313-1	4.94399506336606	1.01110995760401	0.901578705749388	1.12148828622075	0.262080074856255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	2.37426628469346
Merged-chr5-134531851-4	6.06721442093932	0	1.35275964540609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-105430590-1	3.1972300921116	0.661565820908165	1.41952640269252	0.466046858764532	0.641181959915436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.815775955292901
Merged-chr3-8770908-1	1.06622583898194	0	1.5571029350426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52031742-2	3.82813975413877	0	1.40576831321214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70586772-1	2.48600588845023	-0.867843775467106	1.16188107315117	-0.746929953091846	0.455105844271642	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.723581231604105
Merged-chr12-33155982-2	4.93745672067463	0.864503238505959	1.16767156101717	0.740365071281589	0.459078506824295	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.62825810554086
Merged-chrX-164590384-1	1.86491023938293	0	1.45154038123379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86827157-2	4.79886093722699	0	1.39453812025122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44231321-6	17.1544587314054	-0.659817820577208	0.540394594706639	-1.22099263582642	0.222088808056083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41357979390182	3.33838479172896
Merged-chr10-41868132-4	6.36791072649217	0	1.37568711550099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112653367-4	5.94927325508113	0	1.36138229760634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145026786-1	2.85153551575048	0	1.43237423746954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103477660-1	3.19968725738236	0	1.39304905641898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13370900-1	2.1142190643528	0	1.54924194292003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-52423308-2	3.85939231817336	0	1.38190628760324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77464299-1	3.34405260032913	0	1.39335685925111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74896525-1	1.25308855908806	0	1.55118223166033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50971237-5	17.4086938276332	-0.453961364667542	0.418217648970823	-1.08546677976092	0.277714969329263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51723679180174	3.71118516247113
Merged-chr11-116429649-1	3.09704426562238	0	1.40601109009663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-179228895-1	3.00844385225784	-3.06401599029414	1.38451810585509	-2.21305591984424	0.0268937906079536	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06002501957666	0.723581231604105
Merged-chr4-137815713-1	5.73530882347084	-0.459536492457202	0.722732098881296	-0.635832410333664	0.524885660410191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59080326047691	2.97020937371516
Merged-chr15-63932866-1	2.75118212654194	0	1.42053322321009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-35347588-1	3.44731149425355	0	1.40637300939928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5856389-2	5.9111360840273	0	1.41929842447231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171046678-2	5.71153186116289	-1.17707618022586	0.978426812888138	-1.20302935765971	0.228964960079285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47044523122567	1.53220248710156
Merged-chr18-67201257-1	5.30450627446343	-1.32661415179422	1.03450173398084	-1.28237015774668	0.199712827558149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0.841757702988201
Merged-chr11-32911971-4	12.3234152595121	-5.38624313447418	1.05873315771658	-5.08744162324237	3.62926046177871e-07	5.24688748515503e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06865448900884	0
Merged-chr1-156450308-4	12.9006039395646	-2.36900976787215	0.640901590142965	-3.69637055720785	0.00021870368809176	0.0111859502187425	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60885640487422	1.61141823534019
Merged-chr4-35950149-1	3.26837247315926	0	1.45704394040195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116153121-2	4.42628831455928	0.493604313990794	1.23420128760634	0.399938258813608	0.689201992211612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.14143228603163
Merged-chr15-55552241-1	2.69460382021295	0	1.41006510323187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12270120-4	9.16772941926457	0	1.35302543505976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133853669-4	10.4151759949463	-1.00941699471341	0.631519225549391	-1.59839471844307	0.109955159314215	0.96510828244411	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89324804327845	2.44030160351097
Merged-chr17-23925370-5	18.507892938407	-0.912085112083574	0.456111640674396	-1.99969707139021	0.0455329846237556	0.554215743654889	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70822911788533	3.29473102074495
Merged-chr8-83106209-5	23.8196055590243	-1.13102641561388	0.526588282514954	-2.14783817484918	0.0317266132129628	0.43848136549009	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90391165337413	4.22622034319064
Merged-chr17-17896203-6	15.4861734852102	0.646862260987336	0.470391533995621	1.37515710687378	0.169082742978535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23551524837258	3.96076256387226
Merged-chr2-50631955-2	3.60399451106211	0	1.4078405417028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40807544-13	69.0202580198445	-0.0693840708909479	0.218749025067821	-0.31718573771671	0.751102671275459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	6.35192217119383	6.29851647123749
Merged-chr3-126652557-3	6.27708172098344	-1.85589586655954	1.26511806770325	-1.46697443814776	0.142383009117722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr11-117878445-3	6.1512650764422	0	1.38742154339905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8928878-4	10.6355892721276	0	1.3584484259989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25148197-5	14.3064156160071	1.45402071812201	0.610047168046066	2.383456221556	0.0171509242986494	0.291096378389147	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10444260405044	4.58758285117485
Merged-chr8-85515943-2	16.2519435231068	0.241718254196449	0.511241449923442	0.472806448367295	0.636351273125571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4833453446307	3.79065813547996
Merged-chr8-106737083-2	3.46384965216067	0	1.40897111332078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34430841-1	2.58735827087878	0	1.56582286954108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-24620569-3	6.22917187712617	0	1.35433990150056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29773540-3	4.8101640255192	0	1.37521029950715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47194822-4	6.15813623819957	0	1.35958644929548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99171366-3	5.50232746225215	0	1.36763567210771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83295102-3	6.1472534253361	0	1.40318699980344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107205338-3	4.41979619988667	0	1.38636025862839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6442509-3	5.37525321907987	0	1.37991008609159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116643443-4	5.29002401838772	0	1.36418453278516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68053081-2	4.34480750896458	0	1.40721994253133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59239574-2	5.53488345918073	0	1.36616551571191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84381356-2	3.55743849887666	0	1.4254916744519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177257913-2	6.32517847379621	0	1.35382534388979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60681034-6	12.1296924128888	-0.128035686592531	0.443410454714487	-0.288752069851337	0.772771113058661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47888438440992	4.31274971321178
Merged-chr11-115182501-8	20.9692861608858	-0.500057839695097	0.349692873349983	-1.42999150913386	0.152719456044132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01648650390182	4.51957441232465
Merged-chr16-23311878-3	4.76549562649538	0	1.36960010121254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36532978-9	32.8529413333844	-0.292543413678842	0.40224996982013	-0.727267708210531	0.467061975749357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69035425864417	5.13286654254454
Merged-chr5-21043099-2	4.7712098302166	0	1.3712143779142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-117438953-6	16.0727629668663	0.464698118786521	0.362476859391545	1.28200768337754	0.199839950949835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38375013718256	4.91024303784896
Merged-chr1-161735660-1	8.95790864849101	-0.509797036225235	0.589330140020627	-0.865044907099765	0.387014141357071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87571368613932	3.5293303349537
Merged-chr15-75090038-1	3.2798923979802	0	1.38998197820637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74639374-1	3.25951504664184	-2.33558403518877	1.36412377519923	-1.71214964334718	0.0868690947354617	0.833412834579061	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81518459389541	0.303163067301871
Merged-chr5-32721106-1	2.1281700398288	0	1.62585384917703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-99932103-3	3.86288740962142	0	1.39150006650343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-80958793-4	9.388893916723	-0.182953192444305	0.589294933931899	-0.310461166234033	0.75621028632295	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27327435470401	2.92158494764864
Merged-chr11-61659203-1	2.43625029460461	0	1.49036739872749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101132835-3	4.07160983124036	0	1.38909310144161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77520893-2	5.7911722477257	1.44851418648916	0.815391093237594	1.77646554947968	0.0756562153120604	0.767705097656952	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11480110409737	3.22827005549364
Merged-chr1-186855637-4	17.6790731850824	3.55367327228311	0.705485351371857	5.0372034874612	4.72382516421929e-07	6.61810340468548e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	4.99552394926137
Merged-chr10-87841743-4	9.1574921559703	0	1.35503194633271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14242567-3	7.40227279366165	0	1.36984092945064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87207505-2	12.1614458214239	1.84084760928733	0.762470988792749	2.41431823157235	0.0157646866649075	0.275193513942744	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90896656829731	3.90347729219478
Merged-chr6-38911346-2	4.49836826473521	0	1.3794490419888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153208342-3	5.04225327789442	0	1.38911984446024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56681387-3	6.38265536386532	0	1.37210147379288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67061666-3	5.11132820663201	0	1.37199235488306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105139389-3	6.26182882734069	-0.87140150163633	0.769548034272946	-1.13235491850696	0.257485249891875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49359679229482	1.94207584056134
Merged-chr1-136606001-4	6.89130892522601	0	1.37129213700195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120792907-4	7.91846684433685	0	1.35524768735134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43965786-6	18.1102559785726	0.525413489731121	0.489835024365327	1.07263356762186	0.283435557603814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7263309320867	3.45592665239688
Merged-chr2-117195451-7	14.9211330319101	0	1.35137624451037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73561810-2	4.69875450433199	0	1.37697963434498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38974288-2	1.80235701979421	0	1.73662815103406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84675864-1	2.44117355443725	0	1.44314581193317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-42057140-2	3.09848792507966	0	1.4721060885129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-13122304-2	3.3702277041614	0	1.47350738680973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37434244-4	8.14751817537	0	1.34849072293052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144498551-1	3.67043850128846	0	1.4736589808202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12745508-2	3.60524793438183	0	1.45332912862523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170608802-1	2.91708733208277	0	1.41459805730791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86600190-4	5.89917249493525	0	1.40219405711118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8496930-15	48.3102621964042	-0.275129623068637	0.357322491436999	-0.769975665293787	0.441314327912993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.40178291198923	5.19171220588497
Merged-chr14-22085575-4	8.64305907414368	0	1.36507072058322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156009162-3	8.46992398109902	0.648212026180196	0.601573271576375	1.07752797008685	0.281244462051087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37705875126183	3.4436174369594
Merged-chr10-54060065-4	7.29416963140568	0	1.36964957851279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91509559-3	6.26189815404883	0	1.38225435659561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19867789-2	4.27091422632754	0	1.40226022770855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64223614-3	5.68909859120009	1.79160234417983	1.27829295586618	1.40155848935726	0.161047130102668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr13-95951233-3	5.0758944236059	0	1.40259163258436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50880219-2	5.44330163987029	0	1.37100763469503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136149729-4	9.53274283011838	0	1.39546015279929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29991223-4	10.9060520751128	-1.11621311845894	1.23554683614172	-0.903416273513815	0.366305006291015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr11-46820116-5	22.8529217879245	-0.67343351891415	0.543722320914323	-1.23856147340375	0.21550794319228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36572739539461	3.81403053205161
Merged-chr7-34957987-2	5.76064738469183	-1.66952057419676	0.970776640491496	-1.71977827294186	0.0854727534736842	0.825259930031261	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42194161705889	0.67591700901439
Merged-chr16-33956339-1	4.00890538149205	0	1.38104414352763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49859678-3	5.84703180739133	0	1.37194622505294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117242928-3	5.87721770714185	0	1.38900343850609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59194788-1	4.15409008925148	0	1.38169967195084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14065005-4	6.04852542330016	0	1.37569261193893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122558521-3	9.84893212331184	1.20986052304206	0.68998330990915	1.75346346160367	0.0795224860556345	0.790845740852221	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82306449654395	3.18926601939951
Merged-chr7-101546838-8	20.6830774221662	-0.350466965458653	0.453780982967128	-0.772326251239227	0.439921221212646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68973246428554	4.49858365111982
Merged-chr4-3529903-3	4.91125801042373	0	1.37090560527025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64297303-5	10.4670434852705	0.174058618746757	0.794554207654595	0.219064498142363	0.826599805456197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.3626301568499
Merged-chr2-150672175-2	5.432555271569	0	1.37030665852406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56668978-4	8.01413095151555	0	1.35557423235403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11071332-2	4.70904864259769	0	1.40426173883585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-74935456-3	5.36603629056442	0	1.39983320516317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9656696-4	9.03869745716093	0	1.35491859630547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191965254-5	10.142108361937	-0.507421806067578	0.854176398044948	-0.59404802945735	0.552479989376335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.17858215524007
Merged-chr17-69396319-4	8.16330214325253	0	1.35322181457363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94417868-4	7.0365871565816	0	1.35792563639931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170101372-2	7.38368639166413	0.500160007297518	0.712984604751325	0.701501833229574	0.482989890962125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09157224416565	2.64807474181347
Merged-chr7-102153848-2	5.09787670740329	0	1.40707057903753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57841930-2	5.2834835374354	-1.15296511506054	1.03811378411178	-1.11063462667247	0.266725651810058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	0.724326877898254
Merged-chr11-83058078-3	4.83616856388218	0	1.36168608100482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117677230-3	5.79166776354202	0	1.36543427403831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38144839-3	5.84618125385469	0	1.36719073617917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83581102-2	3.25017480610951	0	1.47072700857847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110683826-4	8.21530248292772	0.233420836167026	1.01908350019587	0.229049764933063	0.818830237272015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	1.26411936531267
Merged-chr15-97059856-4	5.53808027152038	0	1.39468172273328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126513396-5	15.5234304904742	-1.4743425470442	0.542085041170196	-2.71976246358236	0.00653288266403181	0.148337915093611	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26371880735186	2.82323356651535
Merged-chr4-141473675-2	10.4451278026177	1.53577488879477	0.636786327532091	2.41175857959571	0.015875789850799	0.276334313320392	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03169262342392	3.73042007141733
Merged-chr1-171451180-5	12.5719288841087	-0.396216202811299	0.472034922464226	-0.839379003449319	0.401256662406504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15780647765762	3.54356663220656
Merged-chr14-30255982-3	11.273027766416	0	1.38476697372371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46459488-2	2.86358328786512	0	1.42687526748458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61241525-2	2.83050950223851	0	1.41640012806402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121215540-1	4.73445836242621	1.61183610257431	1.00838192148882	1.59843811974983	0.109945506681742	0.96510828244411	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.84899591177394
Merged-chr8-56614465-1	1.9581136902276	0	1.43963605347386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-40953128-2	3.11974676937068	0	1.40730910308052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36262353-1	2.66323314427322	0	1.41454914604688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48707644-1	3.05900423253392	1.40125469029073	1.33629683380674	1.04861034976708	0.294357490441795	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.990919527803163
Merged-chr2-165403479-1	2.62489830740546	-1.81628891636894	1.48741961266563	-1.22110055622699	0.222047949135303	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr3-149478653-2	2.50216536838517	0	1.53774545930105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83106688-2	6.84393782832176	-0.808629283032265	0.937844614115211	-0.862220959487142	0.388565938039926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65175977651716	1.338064021838
Merged-chr16-20014270-1	2.52158192489743	0	1.42505035581118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167912108-1	1.94300430242991	0	1.55888827175277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129928634-2	3.30881484757844	0	1.40316480408903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119099882-2	2.52598242141965	0	1.53275393421927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89024852-2	9.63702933428242	0.199659184619472	0.556422537886081	0.358826558999573	0.719724842808438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83772357519285	4.19461720440075
Merged-chr15-37656925-1	1.65684564309504	0	1.53641632883228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108546247-1	2.4217929362736	1.8422495122771	1.59492573873136	1.15506914681962	0.248062111563749	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr6-100480678-2	2.72569932657635	0	1.42711549567699	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118180388-2	2.89126942777949	0	1.43240594509477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23092545-1	1.86623230088806	0	1.58294225376968	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32833134-1	4.63145628108132	-0.627009419737095	0.728517510709243	-0.860664857769409	0.389422653421124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50794861036089	2.4215211027727
Merged-chr7-84227957-1	1.87958105517396	0	1.60263270951847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86952469-2	2.84879161800827	0	1.40313838673008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6351999-2	7.16528942825629	-0.424753753340916	0.908716492562273	-0.467421640101693	0.640198243041512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65880184244346	1.27673210875742
Merged-chr13-37692560-1	2.69001053292501	0	1.42388553557301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44193378-1	3.97158452108033	-4.44574769849226	1.27543652916831	-3.48566753172049	0.000490910718788093	0.0211621060766074	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04002452185958	0
Merged-chr16-36634260-1	2.61075323333523	0	1.42236671925515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95674682-2	3.79680061436035	0	1.39771615095004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156147468-1	4.63458404065692	-0.98214597827653	1.15209902813604	-0.852483991645691	0.393945520310647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72065437544902	0.948471875794396
Merged-chr12-35392375-2	7.92654238422946	-0.398437485520747	0.72826815492311	-0.547102715980783	0.584308166452729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34883822259402	3.21206588080071
Merged-chr5-53382251-1	1.81680423938966	0	1.49636294542808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117755204-1	2.95077237532484	0	1.41484561712828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53765532-1	2.75629254679268	0	1.47289165108533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13681035-1	1.48606506560264	0	1.49103706489704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63617473-1	1.44084961758778	0	1.67600396632944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62695987-2	1.91905386326304	0	1.51506466226744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43784087-2	4.46540696959334	0	1.41605218464919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117885541-4	5.50355390750109	0	1.35929477303145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74704007-3	7.19333316886977	0	1.37137222959368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3423188-3	6.85858993629418	-0.75770868998924	0.917694211926346	-0.825665761145777	0.408993719861412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80442813729532	1.20027794713453
Merged-chr17-71215428-6	14.0418564743011	-0.541868969839811	0.507793529752616	-1.06710491191921	0.285924464037313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23011760654391	3.72566160630943
Merged-chr4-133174486-8	18.8527168249996	-0.126392628249086	0.494590193229737	-0.255550211021625	0.798298167796387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27601054562869	4.35413989920068
Merged-chr9-121536317-3	4.0627707679123	0	1.3926616253922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69252584-3	8.55667190761886	0	1.3498420399809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14699169-3	3.89549907554689	0	1.38370633738165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53374377-4	7.45833666220428	0	1.36034879736034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12039438-8	23.4083771530941	-0.601224424378549	0.41676312177512	-1.44260466669352	0.149131868029119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95173657450393	4.33845876993237
Merged-chr1-55511722-8	27.02311040763	0.286800863804768	0.474157797569185	0.604863750580671	0.545269530613739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34011521712358	3.85891950328369
Merged-chr15-59802595-7	19.662276240969	0.421788964382271	0.453531330924755	0.930010642312713	0.352365574342316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42491520061759	3.62486788702607
Merged-chr11-63755036-2	4.72020428648776	2.8032380384121	1.0972142178152	2.55486849595695	0.0106227922466227	0.209370690258943	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	2.83779573740566
Merged-chr13-19701137-2	6.64549270601075	0.163281668876054	0.755619165690789	0.216089898575802	0.828917673480114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58162106618839	2.63416037351618
Merged-chr6-73709819-3	5.66677408485858	-0.499671135478572	0.93339494225485	-0.535326594197619	0.592424039777838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	1.30064958020929
Merged-chr8-11471513-2	3.02133809517625	0	1.49155730209677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53673782-3	4.74178901097983	0	1.36562113956615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35729794-5	24.3475080765412	0.325399566323563	0.482498229624454	0.674405720777117	0.500053406674914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62693894728879	3.97767939465748
Merged-chr2-163676989-3	6.39379362873026	0	1.36981379171695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142712983-4	9.79289901588839	0	1.36495161482081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173694525-2	7.71191789998082	0.469656922382064	0.71255440507734	0.659117281481247	0.509820459153871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49898368658353	2.66916291653937
Merged-chr17-42480365-4	21.3811950127442	2.4615875674563	0.62831945576946	3.91773252420102	8.93858088146095e-05	0.00535123698386934	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	4.13318703309255
Merged-chr10-118095171-6	21.454853329404	-1.278912679403	0.474104613741694	-2.6975326591101	0.00698554322051688	0.156032761859249	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85738150259983	3.3856268707682
Merged-chr2-13785468-2	3.95761542582148	0	1.40421914271221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41330578-3	5.99809209978475	1.72214847561498	1.26663621397053	1.35962358933079	0.173949069383604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.17858215524007
Merged-chr9-22457606-2	3.92367768955917	0	1.3701848230802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35591081-3	11.27713429662	-0.585800681841732	0.530773853186965	-1.10367283227002	0.269735084754734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55656688269138	3.80777254451249
Merged-chr9-37243034-1	2.50940000893948	0	1.42020858176753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66144451-4	4.91623119782978	0	1.39807020760064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94082476-4	8.71868703662596	-1.04218032515171	0.940821042218488	-1.10773492341775	0.267976312171833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	0.662147012823607
Merged-chr2-128375053-3	9.70592082852821	-1.95096314416464	0.891864487913029	-2.18751073801572	0.0287052601927999	0.411820860074007	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40978719347766	1.36465105606579
Merged-chr2-72984394-3	6.23770545606545	0	1.37021005258524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8820161-1	7.14266973884413	0.555302914106287	0.76719869932939	0.723805859670615	0.469184931426279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63749632292653	2.18893016279325
Merged-chr14-87190446-2	6.16306220497041	-0.433042303228729	1.03770553544466	-0.41730750047813	0.676453503036411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0.662147012823607
Merged-chr12-54969248-3	7.54458000446366	1.56744323831596	0.761304037097339	2.05889258684642	0.0395045294014025	0.50267479253999	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	3.08876753582402
Merged-chr13-44416219-4	10.3566114861228	-0.141332548464997	0.792942162970582	-0.178238155397773	0.85853594577712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45575152610536	1.85449916425446
Merged-chr1-172346932-1	7.87425818165444	0.388490057896061	0.624207354623103	0.622373406879564	0.533696362559482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28937764326066	3.22885111598229
Merged-chr1-182108678-3	3.60653625365668	0	1.38849742213923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54092372-3	4.42781517722159	0	1.37869681232195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37830898-3	3.50169134063961	0	1.39689659055562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102863791-3	5.41439705627688	0	1.36579481123755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132312434-3	5.79129590600263	0	1.35379169580036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166631961-4	7.52258943368832	0	1.39089477671976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105721144-1	5.41534412488542	2.08908972113641	0.989640477326678	2.1109582408954	0.0347759013507859	0.466633796426233	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	2.21110340482925
Merged-chr8-45875452-2	6.91674061645224	0	1.35584291823789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31634362-2	9.7943637019374	-0.691649711333522	0.649359594058685	-1.06512588350395	0.286818967660022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89695911540391	3.94726615462035
Merged-chr6-84031461-4	6.38152664754816	0	1.36326498154416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21747589-2	4.54338508549039	0	1.37222622462626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41839114-2	3.58155137121704	0	1.39276758674463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103870213-2	6.46113981803184	-0.702605426217116	0.904916273805569	-0.776431418635397	0.437494299675856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72678076939999	1.76197067039868
Merged-chr2-128770789-4	16.0617519894899	-0.0259394198431467	0.467804777841765	-0.0554492409479425	0.955780567545826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20530253317546	4.2330985741333
Merged-chr2-166195214-4	6.33653978963153	0	1.35013549424307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24595006-5	11.0555692755888	-0.910394400531107	0.991381398875643	-0.918308938985152	0.358457148740572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.67591700901439
Merged-chr9-40776656-3	5.47625129491355	-1.72465766057729	1.03524931638106	-1.66593460462859	0.0957264402948122	0.885268619775167	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12164305972745	0.67591700901439
Merged-chr9-100395898-3	4.97455296172383	-0.461111945175643	0.869909207410051	-0.530069047721078	0.596064058433488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	1.30064958020929
Merged-chr6-32610860-6	11.9233706754572	0.418776570568936	0.455539928226584	0.919297178184209	0.357940153388883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97164016370396	4.46622008033945
Merged-chr2-119163336-5	14.9253772970543	-0.901851418920889	0.530717011164084	-1.69930754045881	0.0892612525628393	0.847046604084739	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38715019289131	3.45542659540834
Merged-chr17-27553036-5	11.8980390019693	0.699478445902855	0.570319875455666	1.22646689341485	0.220023026429651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12097634090368	3.12429952828235
Merged-chr8-75071812-4	14.1872857056887	0.550009665385428	0.595113595060373	0.924209545792062	0.355377226573309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45990924072161	2.40057763850837
Merged-chr3-21962041-4	8.31854319563353	0	1.37350673382042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98673353-2	3.52815500325965	0	1.38202952734112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95707474-6	23.4476366937376	-5.04233706024403	0.795551220131564	-6.33816771647985	2.32513650192722e-10	7.64569978142031e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	5.63452241364722	0.577068348605183
Merged-chr10-88725534-4	6.70444940280638	0	1.36212869059876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-71334232-4	8.39543674417914	-0.544496619102139	1.20044366203472	-0.453579485920424	0.650131521291876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.55634759613363
Merged-chr1-34061306-2	2.84977710752518	0	1.40586164992598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38027062-4	8.21483680608618	0	1.36378396964642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115334655-3	6.29020233517881	0	1.38301035312509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137942948-1	2.55648403614428	0	1.40244257797888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95426731-2	3.05256260265913	0	1.44189538519386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101325542-1	2.75981487624419	0	1.43074189461394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44420364-2	2.39801696591499	0	1.72278598810098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108556055-1	3.00097634962988	-0.0356195184274318	1.40346644840213	-0.0253796722165928	0.979752125106531	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.413263464506793
Merged-chr13-113590966-1	7.02077780911577	0	1.34926993503918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170962504-3	4.35024302104459	0	1.38325538477305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37029957-2	3.86783804340027	0	1.37582544074254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100780488-2	4.12599204531427	0	1.37530807086822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72478089-2	3.56138675151756	0	1.37923292035163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66077246-2	3.26018157349552	0	1.43531799837114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28337662-2	4.7346906755316	0	1.43616021485979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52093524-1	2.80869962140478	0	1.38973167231466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40272435-1	2.90327094750255	-1.01012999435449	1.22952634899663	-0.821560266015295	0.411327211201918	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.723581231604105
Merged-chr5-34232020-4	5.79012323664677	0	1.38288543367553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174036224-4	7.41150447681188	0.441106099535346	0.736724074406086	0.59873990121871	0.549346344655999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84016081186083	2.57808039585857
Merged-chr5-97320334-7	15.8146756292672	0.524497330882746	0.584909844503934	0.896714828466557	0.369871105984926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66093541386832	4.20116759609516
Merged-chr1-155087090-3	5.85187417192846	0	1.38945882476546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129643352-4	5.76448107436517	0	1.36206470721576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167057832-4	7.43852501266486	0	1.3554662821321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91187568-4	9.81426515775893	-1.31482850247311	1.32795166570715	-0.99011774029663	0.322116573190895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0
Merged-chr4-46611395-1	3.4426700445406	0	1.38441334516073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10177305-4	5.22832684966053	0	1.4076174392495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68129783-1	5.08776980645034	-2.8093235530614	1.11669794138425	-2.51574167816499	0.011878220794749	0.226477798730887	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35479685106325	0.789505890477757
Merged-chr2-165947757-6	17.6807600274548	0.232346599389369	0.379721449761887	0.611886949065076	0.540612556951287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67960130276884	4.94524334699082
Merged-chr11-86578424-2	6.55321100119075	0	1.35047948148529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31289249-1	3.08096349619752	0	1.42148013662749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120012933-4	15.2636493918037	0.668089052825807	1.08056326841395	0.618278514877181	0.536391762010227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.40418299230996
Merged-chr1-24612753-3	19.5340703284889	0	1.47340552394884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100125586-1	2.62818701008207	0	1.4078321208841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61052147-1	5.66873225885741	0.0243127819850617	0.73816939153733	0.0329365891674637	0.973725154678467	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79125192100576	2.35163392625407
Merged-chr5-125052419-5	12.5351635763328	0.424251754026368	0.701709460324926	0.60459745523442	0.545446497938828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.035112151504	2.33008424732248
Merged-chr14-25467781-6	19.6247762914826	0.299728138952729	0.663567639873514	0.451691916456116	0.651490942455365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13485555437708	2.74566211231823
Merged-chr2-127890798-4	6.50843140105872	0	1.37283292850349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171685062-3	8.65810434318161	-0.0337790404780799	1.29439867131258	-0.0260963188751009	0.979180513176308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr9-47595416-9	28.1113984470934	-0.340861910104903	0.36442190723457	-0.935349668442127	0.349608126325853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20594710537751	4.8806940247053
Merged-chr7-80439521-4	7.70640474730147	1.60730863660229	1.06132436667892	1.51443676133796	0.129915101505422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.38992070941417
Merged-chr16-35056975-4	6.02574258325001	0	1.39068241051601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24039022-6	20.5453593633002	0.212796040629949	0.3600976595338	0.590939804789193	0.554560754308913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44564625477121	4.6339008793691
Merged-chr11-116423350-4	18.7252029401684	1.14366540468671	0.551700809062499	2.07298119904905	0.0381740293124256	0.493015457209347	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68363892577648	4.1845144001725
Merged-chr18-67606288-2	3.8648521263264	0	1.42176577358134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110454352-2	3.40656298108849	0	1.38239079395168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150915311-4	5.51252888553046	0	1.36178982268347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129526102-1	5.29523119665946	-1.56148333797743	1.14098458522573	-1.36854025742031	0.171143029778192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36540726817539	0.723581231604105
Merged-chr13-99263475-4	7.77316435287848	0	1.36795097201243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173682437-2	6.60119931287136	0.95254951435384	1.06115901255027	0.89765011943365	0.369372109964763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.94927122251658
Merged-chr14-117690105-4	8.85293752413824	0.797934881520807	0.795889686775745	1.00256969625194	0.316068523148087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	2.08188782053321
Merged-chr3-90444143-4	7.44608225152435	1.26415460285178	1.32173978248277	0.956432286903841	0.338853879202204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr15-100743455-4	12.7603370181894	0.0649798679504406	0.463893968493101	0.14007482822318	0.888600868658259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54730276905561	3.74060024344072
Merged-chr19-28659389-1	3.32385233473851	0	1.49240063729455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95810587-3	5.57562094277422	0	1.35685231624028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126527494-1	3.02004860793435	0	1.44271298274139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155564996-4	5.38255571882887	0	1.36970807353588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24312358-2	7.32514292753819	-1.84946757223252	1.209464816297	-1.52916194610357	0.126224301728465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0.303163067301871
Merged-chr2-152808753-2	6.00488900849348	-0.716424549874026	1.01248716556918	-0.707588771726584	0.47920066762547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.662147012823607
Merged-chr9-47727290-7	21.1809491993192	0.275185049179653	0.331182294018611	0.830917153935134	0.406020432334839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75420081281362	4.99578470900935
Merged-chr11-57970611-1	5.06248775830472	0	1.41450245244599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95679005-3	6.30816831509527	0	1.35569710452381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65112624-3	7.71707556352554	0	1.35192194722889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50379400-3	5.53908066781838	0	1.35733397414371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57947169-3	5.3535146574705	0	1.37989257340101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125162144-2	3.49489109190145	0	1.45140085882614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30183969-7	20.8120082702426	0.416979776154589	0.548757685257107	0.759861387561658	0.447337444105114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9580951787751	3.86835558712952
Merged-chr8-35366722-3	9.5510298629501	-0.892344767653815	0.630141462950094	-1.41610228832773	0.156745558221765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84182112623054	2.51470480589047
Merged-chr2-78923106-4	8.18881745062094	0	1.36146784333795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54957136-4	5.62089769017106	0	1.36916551915135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72109126-2	2.92860823743954	0	1.45844778573574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7320446-1	1.77048984208458	0	1.58152086821479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48109304-1	2.46527712591208	0	1.42375073306579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136736004-1	6.73924765844712	-1.80541021063421	0.68156583192526	-2.64891537407966	0.00807505490878262	0.173911216238714	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90695849062881	1.83150711868652
Merged-chr7-96870652-2	4.78034366333128	2.91923529649497	1.16513520082661	2.50549060265615	0.0122281647702858	0.231461379233968	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.70266130792036
Merged-chr2-131935919-1	2.54718299399487	0	1.40136785544244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191559981-4	6.48266504906002	-0.0357644505466089	1.19522577128042	-0.0299227571944798	0.976128656357407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.904676873936758
Merged-chr10-4096459-1	2.71354914165639	0	1.39838092727839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3713241-1	4.42256516221604	-1.36815934728056	1.52807778004965	-0.895346666997611	0.370601801035776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	0
Merged-chr18-3006332-1	3.53473050144171	0	1.40546886189081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144219489-3	3.86389571144265	0	1.37870378386044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34047644-1	2.31429643924878	-0.0353983438809551	1.47251143932787	-0.0240394355762104	0.980821152746054	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.601513806634888
Merged-chr17-87601689-1	4.19030639575725	0.815821403808622	1.51978666586459	0.536799948395723	0.59140580732329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85467724076438	3.12097805208613
Merged-chr4-34080102-1	1.23318855740541	0	1.71515020776412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117082561-1	2.14969826790307	0	1.59795542530326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111653641-1	3.46425902231912	0	1.37830190849657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44747578-1	1.60926088381583	0	1.50442772612222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57917742-1	2.22011690607643	0	1.42839084936192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110921003-4	14.0355156026055	0	1.35934839526559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21221085-1	2.9744241984201	0	1.40926047728701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22105524-2	2.51172266865254	0	1.51888674875036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-14997618-1	3.96230291317837	1.21677274603924	0.966574992494245	1.25884981040049	0.208084585028904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39787032445846	3.23373381575239
Merged-chr4-22381920-1	1.74909602574003	0	1.57233060307915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36308914-1	3.37967114382669	-1.66454514048532	1.34224925952521	-1.24011626653764	0.214932393214402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	0.41385117919798
Merged-chr4-44292784-1	2.85884980424188	0	1.40968815935953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16904104-1	2.06847842513237	0	1.44287913375315	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120977224-1	1.67521871361298	0	1.5777209335265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96550436-2	2.21893230628806	0	1.61778303965129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132025602-2	3.6266925071978	0	1.37561044932338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36130301-1	2.4134298988812	1.43825658752241	1.36069476817261	1.05700162972917	0.290510843647542	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.25502116749499
Merged-chr6-83689620-3	5.93977693004742	0	1.38953986968239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33954591-3	6.60438774574348	-0.73205387951609	1.08622202284387	-0.673944980050649	0.500346293979864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.879366456215217
Merged-chr15-103183383-4	5.84329600343362	0	1.35365690147508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88186094-4	7.5686661164802	0	1.35613475221991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84813282-7	24.2090930152116	-0.516420546229861	0.368633535957801	-1.4009049526329	0.161242497568315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64471849204817	4.87751485054387
Merged-chr18-30583618-5	12.2198701859759	-0.567118048433097	0.501088880879627	-1.13177136845974	0.257730567906984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16684233090503	3.43528863142049
Merged-chr17-65724438-4	6.17861068649693	0	1.37540673984752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49986821-3	4.7384966536465	0	1.38403885891847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32560219-6	18.4331687705284	-1.50843766291707	0.414640967047189	-3.63793687261346	0.000274830762328667	0.01358138673584	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26999052975757	3.53022686022207
Merged-chr1-51498659-3	4.15776318880605	0	1.38130444356741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3980554-3	5.69661526639017	0	1.35830222162696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113453733-4	6.00613688356211	0	1.36197197930466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135674464-4	4.30600653282881	0	1.41884889871026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-65226445-2	4.48603869093515	-0.0232391068518396	1.35708441063003	-0.0171242898892714	0.986337461222683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.600815099743027
Merged-chr8-26964086-4	5.01763609259753	0	1.40729283556961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128395510-3	8.68337724946858	0	1.34982451663465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-87075342-2	8.6859960879547	-0.874861583938799	0.705612300808484	-1.23986158253816	0.215026595640998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82912746876109	3.18499839297128
Merged-chr15-99698812-2	3.92746632827162	0	1.41208800393108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71188814-2	4.2629152744778	0	1.39473906219181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38228652-2	6.06741044094434	0	1.37415435509112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79123007-3	5.29648865379415	0	1.36649822443896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79270497-3	4.21067046013853	0	1.41257517785397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84340330-3	9.28601286516128	0	1.38899283248322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80777327-6	21.738008496585	0.487389703180782	0.466926138427651	1.04382612809392	0.296565840789398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98733844465565	4.38391684601714
Merged-chr9-114788795-3	12.7864877424112	0.862424779329095	0.710202961454438	1.21433565633537	0.224619575018839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97978184934906	3.19754043889475
Merged-chr5-5214717-4	8.13518039759512	0.445992114888645	0.823948497333127	0.541286398764227	0.588310193833405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	2.17884592431967
Merged-chr5-122897102-1	7.71558515220153	-0.756212859561733	0.532833587347128	-1.41922896288645	0.15583227465243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98208324490383	3.2309456009552
Merged-chrX-106130110-3	4.98670675923608	0	1.38067151185236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115005251-2	3.88919404877985	0	1.38952439832686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154572539-7	20.2485809243689	0.158017769782435	0.404469943208822	0.390678646054183	0.696034784902763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51819350427339	4.50791400271708
Merged-chr11-22930299-3	6.1868781406491	0	1.35740347931037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127052348-1	5.20581346938928	1.69384623978639	0.885949361609485	1.91189961095431	0.0558890716060213	0.637313623543468	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	3.06608617178045
Merged-chr12-32486911-4	7.18059325008988	0	1.39319176088729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31188268-4	4.74185870536175	0	1.38908799692114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53743201-1	4.65970975096651	-0.779414631237612	1.18686973549046	-0.656697704837447	0.51137531052301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.841757702988201
Merged-chr4-155721815-1	3.74515575372951	0	1.38150095682852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62470659-4	6.47942658663276	0	1.35907002972933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-48016674-3	6.34374210203693	0	1.35190225499345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50062332-3	18.4357573518396	1.66647968441089	0.583739421156768	2.85483492121966	0.00430592038294259	0.110408590110279	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01259914296816	3.69558205272216
Merged-chr7-133744629-7	19.4267585461437	0	1.35330325501065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19951925-2	4.34671570670433	0	1.41439727093404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101066707-6	19.2319467353917	2.94833983127524	0.688156445083936	4.28440342648484	1.83230175047531e-05	0.00146002018724273	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	4.30410878777571
Merged-chr11-5780331-7	14.486452926622	0	1.34699195248505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61031922-1	2.06280539554649	-2.48457707480209	1.45850525281572	-1.70350917146544	0.0884728231291422	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr16-50688324-1	2.54001670963978	0	1.3941996525741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76638434-1	4.44687964859796	0.957656786948506	0.919184811992087	1.04185445021991	0.29747916497885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.578845274708	2.93077615073197
Merged-chr8-83178928-1	5.97156378843988	1.46668999366415	0.978706441065959	1.49860053241981	0.133977294530143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82866868473699	3.54182670684111
Merged-chr7-41651735-4	8.26298125158546	0	1.35936877433109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71388473-1	7.40630104720989	0.439049375438113	0.554548413241287	0.791724157809608	0.428521533076541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22182750332539	3.59391186788468
Merged-chr1-23279941-4	6.40604048700738	0	1.35990993854281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53460448-4	12.2998894221574	-1.43384673903255	0.692187015061639	-2.07147303811365	0.0383146115457352	0.49447862512218	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73115435885655	2.52369843946035
Merged-chr16-94240342-4	6.21741804430621	0	1.36073114717896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142098025-10	43.0113641345335	0.269008967199811	0.308162208371291	0.872946000165258	0.382692511668346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73866252172422	5.01593245589327
Merged-chr2-165922812-11	69.2415172524803	-0.591363653031108	0.239158492906388	-2.47268514634176	0.0134102230560842	0.246838945568954	C57BL6J_F1_Control-BALBCJ_F1_Control	7.22790308513115	6.57795457569047
Merged-chr13-34064131-3	6.47247901806522	-0.112567518200757	0.808019581567497	-0.139312859203714	0.889202928795845	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56070666783485	1.25841856379109
Merged-chr1-128729782-5	15.656872565872	1.31558931555739	0.51197137832788	2.56965402998534	0.0101800124825148	0.203825458544128	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05420713507685	5.4029727042008
Merged-chr2-163929008-5	16.0700941209459	-1.26655854482882	0.49440513042749	-2.56178277060693	0.0104136430172529	0.206618626402439	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43511725126348	3.21088446568483
Merged-chr8-75218159-4	5.48263578635373	0	1.39281338348044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35021574-4	8.00864313155879	-1.52876244141911	0.799562380150782	-1.91199896264606	0.0558763271085466	0.637313623543468	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83989899587789	1.25298535761957
Merged-chr18-33431535-3	8.11505031128519	-2.48387387047582	0.805998642455306	-3.0817345583973	0.00205798265181852	0.063852670645093	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8188140265302	1.18984215491549
Merged-chr6-54285140-6	13.8435501341507	-0.0634705614279226	0.573471740126389	-0.110677749201616	0.911871891123322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42388403259212	4.35941254434556
Merged-chr2-32132798-3	5.083112594912	0	1.38296394566592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33263202-3	5.89225694207833	0	1.36058127518033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70874269-2	7.14030496353594	-0.980599501432297	0.845792090157178	-1.15938599195231	0.24629888407672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74427237692098	1.55482458121103
Merged-chr18-38943444-5	10.8407904155918	-2.27877989436437	0.802924256650468	-2.83810069939932	0.00453828624724622	0.114918058617104	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30316893960524	1.13759034240505
Merged-chr15-78352358-3	5.196201889903	0	1.36785168763565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55491499-6	20.4494744647523	1.31805583119947	0.351222380788194	3.75276720191225	0.000174893255930099	0.00929462911539111	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14115200854855	5.46023727391481
Merged-chr16-76407070-1	3.52542183786475	0	1.41836025048198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-11319784-2	3.83251893701025	0	1.42541937295957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68248020-2	6.48144601240391	-0.124619548964997	1.03286723220659	-0.120653986378058	0.903965106197299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	1.21469436624079
Merged-chr6-89065125-2	2.03918285480247	0	1.55362716282375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-7967554-1	2.10600226588037	0	1.48181118435708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75786171-3	5.9463476013998	0	1.3566425835352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154046478-2	1.76630728597715	0	1.74332289538933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20048466-2	3.6109981207171	0	1.42239493316152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35564748-2	2.04642794073588	0	1.65299367231396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120697278-1	2.53973998691611	0	1.45299627680082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92668776-4	6.23985956643498	0	1.38395382965419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33578157-2	3.43795950914521	0	1.42796997554989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50439023-7	21.3599770305357	-0.390494160700871	0.487565383193429	-0.800906245934102	0.423185923943664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77966037443516	2.86874685605369
Merged-chr8-18568769-3	5.91464600194526	0	1.38519536679508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-8638179-8	23.8749599463777	1.39172688789844	0.491524931169932	2.83144719553868	0.00463378840581221	0.116821528845568	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15622171726911	4.94877273970783
Merged-chr1-154062848-3	4.61545426665013	0	1.39979313121312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74618763-6	16.7984625396181	-0.0563176033281616	1.12464763804669	-0.0500757761123963	0.96006200337607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	1.09325667247081
Merged-chr2-35437997-3	6.44838656559196	0	1.42358607799635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17723182-5	19.6711844721444	0.318981291445631	0.42483767948815	0.750830980505176	0.452754382065923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77797926889449	4.19655160042787
Merged-chr7-88357260-2	3.79258563765937	0	1.39259574637385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44191349-2	3.97051070491597	0	1.3756322924173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107506375-1	3.46420145229152	0	1.39531848024018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142426789-3	6.38065084228624	0	1.38181140513893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151926282-2	4.50389454119461	0	1.36462802478239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99526970-4	7.04590630240338	0	1.35970769188551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91168197-7	11.3110487617546	0	1.36007799505956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18419635-4	6.82969985273047	0	1.37101488562669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17485117-2	3.55188423175963	0	1.44103350296502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36082489-1	3.29040404632054	0	1.40441017802513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62433750-3	4.0585929623278	0	1.46036184841694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30478246-1	3.6049804561128	-2.10308039845049	1.02143828792971	-2.0589402446555	0.039499963176764	0.50267479253999	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87208269895305	0.97908007631626
Merged-chr6-39508276-1	4.17812650570183	0	1.38756749925368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134045167-6	18.9001680818328	0.688374593092678	0.45061613758651	1.52762969559767	0.12660450450695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74892957353768	3.91392525535753
Merged-chr8-111636558-3	10.1069702775699	-1.65209756825878	0.615646135669235	-2.68351813247861	0.00728520245314186	0.160916830617773	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25497198261177	2.36907630355391
Merged-chr6-55017147-4	6.23844548625652	0	1.36053826396182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132588634-6	14.8038574485449	-1.93883612175709	0.788373885142813	-2.45928506549386	0.0139214028677097	0.253846485172288	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57041169181843	1.43512633765766
Merged-chr8-84681132-4	9.29418178645731	0.66958508010141	0.959000786678379	0.698211189607678	0.485045129718345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.66683653681755
Merged-chr13-111818385-4	16.846018699713	-0.334425971475445	0.498222884147245	-0.671237677185074	0.502069130064279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69712380031285	3.46175301797344
Merged-chr6-108407624-3	5.51079274538233	0	1.35752319627784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27987898-1	2.777419497376	0	1.43790026058662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17915169-2	3.85887935125159	0	1.41733673714421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-20998085-2	7.53189707781358	-2.25865400729595	0.923686661406894	-2.44525995845359	0.0144747767461393	0.260800261565591	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76984584142424	1.14143228603163
Merged-chr3-96501578-7	19.6290755618515	0.400719404357654	0.341094114924955	1.17480597531217	0.240072349026735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95456891247646	5.31610548654044
Merged-chr11-108350968-6	18.8009367537135	0.090189574341837	0.461511119090854	0.195422321610592	0.845062343359732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23072246626526	4.26490589010308
Merged-chr17-57100570-3	3.85787755254778	-0.035656225057296	1.39683990816998	-0.0255263504777793	0.979635130690523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.413263464506793
Merged-chr8-24938804-5	13.4369935663328	1.06738821345898	0.670621057536765	1.59164136208244	0.111465310739037	0.972262969586536	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11933742128859	2.67491635662604
Merged-chr10-117682716-4	6.33025915283488	0	1.36600325410946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17043177-4	6.44742536681197	0	1.35687356810467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26493513-4	11.2513837125039	0	1.35573759645612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166979241-4	7.0707778330412	0	1.35970042467802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40544780-2	4.66928894669118	0	1.37370554840806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122372880-6	15.0021061692524	-0.0251601053503432	0.532341423950755	-0.0472630988654204	0.962303538037797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81306874061924	4.69940528681157
Merged-chr17-71595247-7	18.5099829659189	-1.14854458613008	0.60147729824281	-1.90953937826998	0.0561925469163354	0.639031518373446	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83054731850121	2.44497243799879
Merged-chr8-71526432-2	10.2531772776581	0.831090558849782	0.568164619694161	1.46276366046368	0.143532059884992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05573020603771	3.81679192171429
Merged-chr3-145670960-3	4.97558159523347	0	1.37907952886723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-123063102-4	7.85414892361808	0	1.36106292312581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46734954-5	9.88688963525176	0.197885581444635	0.617049322318949	0.320696538002759	0.748440371105908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62358588376636	3.39703598905985
Merged-chr4-122898523-4	6.25304410008766	0	1.36952619355017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78455301-4	5.29208925178968	0	1.37568298827185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119091093-4	7.12288976484554	0	1.35042415545446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53453890-2	3.49235328579778	-1.23916050591244	1.31120623195406	-0.945053856299742	0.344631381413048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.376242425970964
Merged-chr3-104675533-1	2.65197429988891	0	1.41793864421959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28732379-1	2.70475584181252	0	1.43893899176856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69179373-2	6.76486651622442	0.0551822510260577	0.639271614272467	0.0863205088323196	0.931211635633711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85829310154892	3.76276644175978
Merged-chr1-70858802-1	2.89066286565344	0	1.42291811255582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55332820-1	3.18377736521188	0	1.42071906794767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31958355-2	3.00673153189636	0.615393168883593	1.45889305851739	0.421821987081761	0.673154955827246	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr19-6036362-2	7.29665689563055	1.03198253648212	0.743520784855539	1.38796730031243	0.165147002601739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	2.95736515028642
Merged-chr15-90539401-1	5.4677449199719	-1.72718004850698	1.10521267831755	-1.56275808483869	0.118109506485327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74415333242656	0.88866493597531
Merged-chr8-30006685-1	3.88892579814257	0.636427680528084	1.54832038467325	0.411043920126643	0.681040330021328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48366051229539	2.80416378636015
Merged-chr7-80928578-2	3.44395367527483	-1.28413204532734	1.38016322946156	-0.930420415437609	0.352153452288626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr3-121852211-1	2.09467198180128	0	1.53982680968816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109441105-1	5.15695418577796	-1.73539523649145	1.15558442788341	-1.50174681712355	0.133162507951308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56112970471021	0.601513806634888
Merged-chr9-86513523-1	3.45791749072172	0	1.36938841757655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102733562-2	3.30251508110849	0	1.39806064422492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-137609914-2	4.98762375104744	0	1.41064942106085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88201700-1	0.71694706602201	0	2.11627948123177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14474682-1	2.26414004758172	0	1.45177916214801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158597004-4	6.10641969804183	0	1.39459412409248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49997408-2	4.64853549144575	0	1.41276548711398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46176007-1	2.53849818414941	-0.0849142720216883	1.17118551782045	-0.0725028364248491	0.942201748271251	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.97908007631626
Merged-chr1-71830544-1	1.92145099507006	0	1.45244955261536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5870075-1	2.8307555849601	0	1.46363895019138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50736381-1	2.371077066162	0	1.41097122617148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-91023329-1	3.47346941043852	0	1.4889022106936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79179797-1	6.23058532743365	3.57343381925102	1.18270784521634	3.02140028385232	0.00251608498139463	0.074292158339832	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.03807365901212
Merged-chr5-88399969-3	7.15827908334824	-0.0208697424864299	1.136272058516	-0.018366853545344	0.985346195019234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.841757702988201
Merged-chr5-99985016-2	5.51848722530808	0	1.3777595839711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62049614-1	1.76243051939743	0	1.51722226044266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-118775580-2	3.3073442248727	0	1.392908603493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76072772-2	3.86524267311816	0	1.41715160380242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118459762-1	6.95023129637874	0	1.37854545465103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62738484-2	2.98150443145154	0	1.47941133473282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-166500036-1	2.31793618532232	0	1.43008087036152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9500900-2	4.10486725613301	-0.0132292591674228	1.36583013822716	-0.00968587439767173	0.992271911197017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.601513806634888
Merged-chr8-67957063-3	3.38517425738688	0	1.41374998954552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106226365-4	5.96096465344157	0.671508446616065	1.06536753437857	0.630306842424812	0.528493847085645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.17788344834821
Merged-chr10-127103857-3	4.88570362167999	0	1.36191829496116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21847659-2	9.48984477329623	1.42197892254014	0.924142115015677	1.53870156920185	0.123877169074119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.78577552468569
Merged-chr10-99252543-2	4.10465381718551	0	1.44810039904396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169929878-6	20.7789284673701	-0.759688743167523	0.500337871811942	-1.51835147001037	0.128925818827687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25562484009752	3.03839077228591
Merged-chr15-78369126-4	5.99638407297811	0	1.35884099656445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99162990-2	3.88840867568285	0	1.36938379790114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65885006-2	2.98925678183816	0	1.51624535990633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79347877-2	3.31500395772998	0	1.41502451094736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172526885-3	8.72392825991892	1.07914872088398	0.68184966590635	1.58267837449113	0.11349478975212	0.983338105855197	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74357072367402	4.13663397992006
Merged-chr5-146810816-4	5.6800347695451	-1.84900961007152	1.28768960992438	-1.43591250237711	0.151027240449536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr12-75689198-2	3.64477129651853	0	1.39887737219181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50037021-8	31.5272790246246	-0.174219918275337	0.29521563462978	-0.590144619182585	0.55509369712577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.74411331254844	5.5926443769108
Merged-chr3-135192122-3	8.38542365598166	0	1.38727744758779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191230759-6	18.3577702778232	-0.711580396589605	0.932536577135011	-0.763058966304314	0.445428230278332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.765562747387088
Merged-chr10-127617031-5	14.0151682188033	-0.0968559640363239	0.532873151302153	-0.181761764126495	0.85576969242133	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59724981636828	3.52555912699625
Merged-chr4-41563549-4	10.9884897702476	3.08860627875764	0.798137555385316	3.86976688155785	0.000108939469895533	0.0063065395570301	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57403368136583	4.63838448486003
Merged-chr8-35725674-10	30.0875553656235	0.594543284098071	0.421502055709918	1.41053471992374	0.158381851921254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97275083347908	5.61217027916654
Merged-chr12-105731269-5	15.9194921345141	-0.180806475438607	0.529125384578797	-0.341708186203419	0.732570510868381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13848883591296	3.09358029320314
Merged-chr18-75459531-1	4.09754953728688	0	1.3859677912363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77371370-2	5.68127114817809	0	1.40725953230133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41163815-4	7.04532632134852	0	1.36292959383514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117444962-4	5.42606887707557	0	1.37266185209706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90245040-3	5.44750348186574	0	1.35493093333456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137879888-2	6.16449892658641	1.2537078069229	0.737135935024544	1.70078237588723	0.0889838598945694	0.845424662481718	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	3.25881105664687
Merged-chr4-133837192-7	16.7299002658504	-0.0707575670799862	0.403283769247779	-0.175453545308719	0.860723269969075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38281590282677	4.3103619469689
Merged-chr16-50069240-4	5.24018901184116	0	1.36473229877043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53556630-4	6.46190867483488	0	1.36250318298804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7111686-1	3.68104174411082	0	1.38680386791517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57780784-1	3.10118825390438	0	1.47720940561543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53133458-6	26.6408612987355	-1.19665803899243	0.548951455163673	-2.17989774457495	0.0292650421641386	0.417267789717807	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44765639880039	2.1881845164991
Merged-chr7-84665571-3	5.01647811833893	-1.23070993958793	1.30665250565804	-0.941880059356818	0.346254050366786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr10-8842970-1	2.68995838512204	0	1.40551615822524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21621769-2	3.42578717111067	0	1.46082677744884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34804409-2	6.55250235134007	0.374262656515825	0.756378324710035	0.494808807033573	0.620735087019216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	1.67735121185591
Merged-chr18-64991333-6	12.7763155813333	0.994360107516946	0.734165733191011	1.35440822495898	0.175606174991629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	1.43169743284153
Merged-chr4-156031989-6	19.2769667132293	1.3473725384407	0.390812100511064	3.44762236552743	0.000565544161202362	0.0235935648954714	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1466980456172	5.4512245362579
Merged-chr6-136814815-5	16.3231235662593	-0.22836030513656	0.471724142087406	-0.484097133816499	0.628316935314751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68013160626018	3.56113135662273
Merged-chr6-54960053-4	6.52158323141894	0	1.37404092440175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65718394-4	11.401647325995	0	1.35405933274866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31948291-6	22.0080326138371	2.21679425625108	0.609431172488893	3.63748091059698	0.000275317590169564	0.013589758781142	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44597835587314	4.71614063571063
Merged-chr9-44444619-2	5.35325636747986	-3.45268935608781	1.13241914279904	-3.04895000940525	0.00229642691357246	0.0693893666452948	C57BL6J_F1_Control-BALBCJ_F1_Control	2.035112151504	0
Merged-chr10-17344014-4	6.63494860377711	0	1.38212129433724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120366221-4	9.53875431919372	0	1.37761452013055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158155793-4	7.4206823306082	0	1.35744317456655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75835673-4	7.84135066623486	0	1.35407926332434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21112018-4	6.80298781258861	0	1.34742694779019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23753362-1	2.68900222012709	0	1.4245291609456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33503671-1	2.84644394425351	0	1.43203999977444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33024631-2	3.46202813772793	0	1.45170369778415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45838454-1	2.40942082752738	0	1.45693592411928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120343853-2	10.4342370566836	0	1.39872391971342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59297156-2	3.23351589588875	0	1.41172537546427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123174016-2	3.26744460166419	-1.51562851580864	1.1752193684986	-1.28965583484633	0.197170180315537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.465515277017237
Merged-chr5-64769479-2	3.38543547191875	0	1.41419250945683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92530123-2	2.82043090712961	0	1.43942224948554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76860560-2	3.25383402144038	0	1.44997825388175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193600083-1	1.83855239409778	0	1.55858569163589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125427063-2	5.32565540304	0	1.3926399159922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191421800-4	7.15347386341321	0	1.38392800904692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16089088-3	5.05149883554605	0	1.43226402146871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96263830-3	3.69436576675706	0	1.39411590961751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55193977-4	5.70163157841152	0	1.3706646096649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52262638-3	4.76261862871897	0	1.37245778499731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128416471-6	14.3530692176672	-0.048644914959124	0.600225080727035	-0.0810444556901918	0.935406598231291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46890512470268	2.40938238731737
Merged-chr7-81868260-3	3.65793972818056	0	1.40009155134803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50735604-4	9.12342979793661	1.58929192329708	0.748291036306563	2.12389544466756	0.0336788874017006	0.45620499383729	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60308582214967	3.22296663573086
Merged-chr2-122409209-4	10.1514014232819	1.45241906555846	0.601039591189076	2.41651146921128	0.0156700325575854	0.274245750095875	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50670197153503	3.83697311356946
Merged-chr11-22436416-6	15.721143264858	0.402404424436565	0.592345425054496	0.679340816044191	0.496921940367051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48401992256515	3.05563142072694
Merged-chr14-61529704-4	4.73364527691724	0	1.36278032513828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12287571-2	5.45327738530512	0	1.35660742784238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24981566-4	7.58833674282356	0	1.36382401096252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19673190-4	6.89424860503721	0	1.35994735817976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156542927-3	5.14179140165339	-0.0367307811450176	0.75863382336933	-0.0484170096475329	0.961383903463924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4873962880981	2.45531426399749
Merged-chr2-181659350-4	7.2015170554796	0	1.36322176379843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5369344-1	3.06763209854196	0	1.40947677660886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152793489-3	5.64962485911626	0	1.39117844064894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16902112-1	2.80941154426013	0	1.41662089496046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168575114-2	2.75142288142843	0	1.42016543218968	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56552978-2	3.47948569728089	0	1.44158368026434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73808387-1	5.82841356782478	-0.385176457257221	0.780733090194335	-0.493352289143201	0.621763687752246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16157403613654	2.97561767960118
Merged-chr15-88146268-1	1.92335218268437	0	1.57516403383826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128602204-5	11.6091335467134	0.175625478410516	0.568696735973962	0.308820971356089	0.757457715547315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40893929589491	3.08878434834025
Merged-chr12-77047438-1	3.50681998126917	0	1.38738957804407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63092153-3	7.03331604163196	0	1.36530922697475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-4870725-3	4.95192240456241	0	1.37326026383481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129421469-4	8.22168094632157	0	1.35592050290219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54230836-6	15.0929397703699	0.574531965952718	0.524909264847306	1.09453576918641	0.273720068555739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33115673484981	3.85769815975869
Merged-chr4-138007173-6	20.1657818278267	0.417385124730846	0.402631309670537	1.03664348674816	0.299902038629713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26622102602462	5.55398156861331
Merged-chr5-150168935-6	16.7580680806602	-0.368610118200167	0.479008505417335	-0.769527292378693	0.441580348914921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89068978608518	3.21802552564771
Merged-chr1-58770348-3	8.17313379864789	0	1.36547535874259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155257532-1	3.39040022867714	-2.33429302558075	1.35954248867471	-1.71696952837143	0.0859847397130493	0.82755744795709	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chr13-21279711-1	5.68964206557399	0.0614784292815902	0.781175530282233	0.0786998912515584	0.937271331982054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92797716160218	2.37596714242905
Merged-chr17-34317454-5	14.9293308259477	-0.526824612796194	0.4519333622273	-1.16571303831123	0.243730486833965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89515625575221	4.42381717513584
Merged-chr16-10417469-3	4.73381707279529	0	1.37492450793723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40818913-2	5.83584332515644	0	1.38460712108653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101843793-2	2.98977944296686	0	1.42543457511746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50708414-2	4.40218764732259	0	1.39366704973065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30933192-2	3.33976265839433	0	1.39391685126336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78894352-8	20.6084690412276	1.4663100547665	0.509880942747286	2.87578909473629	0.00403018897993514	0.105732163494351	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30712077184164	4.22550308905677
Merged-chr1-174169241-2	7.26533395920981	-0.741379528613175	0.937567744522654	-0.790747690440903	0.429091240434477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85467724076438	1.62518823153097
Merged-chr3-89865176-2	4.96634022556578	0	1.36762764574966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-259225-2	4.27788584664399	0	1.39848068216555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109117047-2	5.48861789949808	0	1.44075170956618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82899153-3	15.3667213677478	0.72713361075717	0.553554598068136	1.31357162110984	0.188990404072318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4150555265066	5.17352130926959
Merged-chr6-55167071-5	15.8932777627974	-0.854277459915911	0.480634473638037	-1.77739531134686	0.0755032216732139	0.76672513112913	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21219430111531	3.23956265284044
Merged-chr4-145210768-2	4.1472616321947	0	1.38903694224331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34716026-2	3.74721278175133	0	1.38589479340847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-168362689-4	12.9798238316561	0	1.34541431348311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9911543-3	7.30798449712905	0	1.36065893968014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121463591-6	15.8501323685743	-0.909922895809917	0.526291933254	-1.72893186901797	0.0838212895066926	0.817304485702221	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23312575791105	3.22451262481033
Merged-chrX-139616209-3	5.90452441476811	0	1.36593133905699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30796660-4	6.64506980772704	0	1.35989088063366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99349512-3	6.70761157632413	0	1.38705188331127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171027639-1	1.97700413674934	0	1.57435695033853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64256764-1	2.98700232285742	0	1.39064278253309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177338893-3	4.29044261361578	0	1.38051364588458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-91814293-1	3.75986894581288	1.58644117486871	1.60402125140089	0.989039997745151	0.322643572574954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961371261847668	2.7375128338831
Merged-chr3-101846292-1	4.05836732848526	-0.340852727338218	0.791400582571993	-0.430695572942936	0.66668973821356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99797140027069	2.73906126224684
Merged-chr2-35545166-1	2.12981516494346	0	1.48047808153876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33177847-3	4.92803850245664	0	1.369369239454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150829956-1	3.40847032242432	0	1.39555061098996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-129729529-2	5.82087708703573	1.29251748754265	1.14513135479886	1.12870674803038	0.259021561711556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43393032742955	2.23112039637829
Merged-chr10-43037485-1	2.70042403819626	0	1.45636141220208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-74362957-2	3.47031195457469	0	1.46337522625424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122209283-2	5.50804903247266	0	1.37935360724769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67807367-2	6.4924755697344	-0.243303039098556	1.00847712256276	-0.241257866594208	0.809355264055158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22189651546941	2.57176845361395
Merged-chr1-36737501-2	3.65754080197993	0	1.38456764473484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77172676-2	3.31536852088738	0	1.40263200349208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182271934-1	1.2315858806601	0	1.62735292870797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4308045-1	2.20966162173439	0	1.48207453869665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5860942-2	3.53852408866005	0	1.40421732729055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83407931-1	2.46067174303544	-1.85406688224252	1.35980221847563	-1.36348276025096	0.172730414097687	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr11-35837854-2	2.28308470871666	0	1.47100463376914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129145109-2	3.30726214245492	0	1.38217884496858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142813201-1	2.59242841435484	0	1.40589286466196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34216813-2	7.87698353966919	0.703463579188419	0.890468651804823	0.789992525579224	0.429532133458394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.610618888618
Merged-chr7-143042627-1	6.93268038358051	1.5986578300023	0.810449530981481	1.97255691920294	0.0485460653705653	0.578582672106678	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46601346246115	3.75092113483113
Merged-chr2-59176915-2	4.13262001920372	0	1.41251011103302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41634675-2	3.8468695094209	0	1.38997782596505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171492424-1	2.13758251801687	0.0656737255595783	1.48660302431467	0.044177042885981	0.96476328130729	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.01466627894101
Merged-chr11-70848644-2	7.26882739570749	-2.00020372960649	0.775246882079377	-2.58008613235762	0.00987756752380302	0.199678204918709	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2696278817166	1.06872581468896
Merged-chr7-38025528-4	16.6084223284237	-2.11863043979152	0.484343717612992	-4.37422921522104	1.2186228346626e-05	0.00103992337000666	C57BL6J_F1_Control-BALBCJ_F1_Control	5.6262124625619	3.36012068083467
Merged-chr14-103535860-3	5.61590921070765	0	1.35752142814053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136551106-3	4.57752561487301	1.16108942102903	1.31054779552658	0.885957326388466	0.375640522974863	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr11-72660553-3	4.62399842861137	0	1.38960022239442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-62858190-4	5.11667468872948	0	1.37454020093524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27096962-5	13.5086837056794	0.41349018726721	0.498478782745725	0.829504086391842	0.40681922543797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20613844154895	3.67874322915522
Merged-chr8-120608072-2	4.36121114776465	0	1.36677279993801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-72980024-2	3.17885063526202	0	1.42075189737609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52965229-1	2.58666049680336	0	1.39436052014181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96948962-4	9.2230594439935	-0.635597210694143	0.630805974840469	-1.00759541926483	0.31364872891021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56861251764816	2.11518404902724
Merged-chr8-108748407-1	3.18225339318581	0	1.4698250555807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59616640-3	5.19389095415631	0	1.37608981986112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76594322-6	11.2973860038817	0	1.34293875643068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115336961-2	6.1852851013398	-0.568996397376018	0.794345058532378	-0.716308852512142	0.473800661803568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16413234300438	2.69364270469469
Merged-chr11-31736885-2	3.40209059538464	0	1.47623559068817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103856441-4	5.44619839836044	0	1.38310033337689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56647737-1	2.36154778108568	0	1.42210929584916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101994326-9	35.8047569500361	1.37344813057403	0.321888978854797	4.2668380118525	1.98263009817028e-05	0.00155967857462284	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36504795478837	5.66767016877973
Merged-chr4-126083878-3	11.4841972311708	0.331005834330677	0.595410229109138	0.555929035391167	0.578259368250623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32928830729835	2.92739023137614
Merged-chr4-102543144-3	5.82583088389822	0	1.38160374404791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122132295-5	11.9837512720408	-0.102505898759906	0.566578613769691	-0.180920875353714	0.856429683077141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01774201252683	2.59902514959701
Merged-chr17-83273810-1	5.74152067329106	0	1.35522365656672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-71218835-1	2.48559688515316	0	1.63001074177914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32801836-1	2.69621816346972	0	1.39589290581402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28013634-1	3.30224814904096	0	1.37667992733244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76610570-4	5.53251453476696	0	1.36328283146214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30236538-3	5.3196260287359	0	1.38072391221073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7315998-3	9.02077553090956	0.71509390822855	0.676720142749418	1.0567055168821	0.290646006387265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.49929517468189
Merged-chr10-94486747-3	4.52108480725477	0	1.38714546419636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79088662-3	3.59642323870997	0	1.43409720428809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92693165-2	6.45330633219107	0	1.38996137188497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116595932-2	4.70687478865138	0.398175392256053	0.795411185491349	0.500590637294204	0.616659253055558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89255009218154	2.55508835029063
Merged-chr1-181230969-2	3.50092032056126	0	1.3975828470898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117879438-5	12.3704165793193	0	1.34795313553341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28606847-3	5.69034801164848	0	1.36265586967005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53236308-3	4.4047777838575	0	1.37253119837986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24035046-8	20.9209728055083	0.20333740303361	0.406923447449972	0.49969448629182	0.617290215447113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43144355104622	4.7001036436742
Merged-chr17-26606716-4	14.9731555306281	-1.2332976435774	0.79470157009907	-1.55190034848383	0.120686069530638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13938900109644	1.03838943879457
Merged-chr19-4295566-3	6.2637813905613	0	1.37075151073161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28539308-3	5.55261613611699	0	1.35988381995837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81141099-4	10.2652488132892	1.22036277209578	1.3291841831502	0.91812917093513	0.358551244496102	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr13-105227218-5	15.2814079066763	-0.352288764448348	0.459414457840654	-0.766821240463743	0.443187805847441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62726586140041	4.09368523423759
Merged-chr1-128597426-7	20.7758872182584	-0.697907979520996	0.513488093076825	-1.3591512421235	0.174098668013347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63318615323122	4.06785694560493
Merged-chr11-97413037-1	2.55190715000156	0	1.47530264863542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27703703-2	11.5663058109829	0	1.38853535595342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76612752-4	14.0877398333102	-0.00667419020344312	0.515028389340244	-0.0129588782707548	0.989660600490164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34909255126794	3.48608599564751
Merged-chr2-132109582-5	8.7690348410066	0	1.35533131691244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31942501-2	7.51049626717233	0.513740314629193	0.872664446659168	0.588703156861669	0.556060419842942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40508790535098	2.09395811590547
Merged-chr2-35308327-1	4.48763477127254	0	1.3846343610288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141678838-2	8.04160373324172	-0.140737268289359	0.595882354749791	-0.236182976669035	0.813290688541603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2669860604792	3.99800382716143
Merged-chr8-124926868-2	2.66562461624962	0	1.46347190642714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3952776-2	2.87756012143151	0	1.40588672024035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121850126-7	16.0251223802811	0.312586307706976	0.504254379617365	0.61989805213823	0.535324908260978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24561012417377	3.73631643648145
Merged-chr14-119027332-3	5.22310668233734	0	1.35578426509072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82571633-2	5.04013930283018	0	1.39338071839191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83356738-2	5.08762249357065	0	1.36444831252241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75641920-8	19.5020653401526	-0.873663105651059	0.473281185118609	-1.84597049940219	0.0648964890086877	0.699664467676171	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33480160814088	3.20119241291158
Merged-chr19-45984572-3	5.89815947614865	0	1.37880374284039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-101892302-3	7.93551361867284	0	1.35489214123966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-48131801-4	16.0305562767021	-0.282323136747384	0.63543457054512	-0.444299302924591	0.656826205155336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5278814224759	2.11350194101828
Merged-chr11-115929969-2	7.89512515419102	-0.0628476435025442	0.522833783402816	-0.120205781450284	0.904320138051832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59447490278741	3.54832801249071
Merged-chr2-158207984-2	3.0962411446308	0	1.41258158254679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85663635-1	1.18677226203343	0	1.64389779028826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13052194-1	3.84345938567679	0.527931867135871	0.957326962639891	0.551464533789025	0.581315272661591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60230598860646	2.27886469683371
Merged-chr2-156787956-1	3.92626086104583	0	1.39942790950602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67486694-1	2.1926541142098	0	1.45385662898554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118700352-3	8.14979232136806	-0.738133927749757	0.794471277219644	-0.929088248895483	0.352843353870982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	1.30139522650344
Merged-chr3-98060026-3	5.72564009814451	0	1.36949377156482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5202048-3	5.38582285319681	0	1.36435917662208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12839787-3	6.17531865427043	0	1.36571451076836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137471259-3	7.57511705786082	0	1.36804225571917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72961072-4	6.99347512219121	0	1.36457205114762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110373035-2	3.67977165309168	0	1.39726712609515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8984762-1	4.7426907274383	-0.967291943341395	0.925626613632784	-1.04501310689965	0.296016911835507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	1.23107802440432
Merged-chr1-151661156-4	6.30292315229771	0	1.37740203026516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90334276-1	3.74201433283572	0	1.40868689507889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119728401-2	4.02955963707465	0	1.3778375295406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46509368-3	7.04412688308453	0	1.3566787756681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77538128-6	24.6391564061251	0.936519360148176	0.410418653632248	2.28186353583075	0.0224973982480764	0.349210757100852	C57BL6J_F1_Control-BALBCJ_F1_Control	5.1031509020584	6.08072830592962
Merged-chr12-17450589-4	15.2253513803794	-0.937542414473805	0.534221584810085	-1.75496917595926	0.0792645803292611	0.790288563905291	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05377451294791	3.15620763581033
Merged-chr19-3384591-1	4.22638662119226	0	1.41922743875882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141159629-3	8.11635086906456	0	1.38672900807886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63899364-3	5.95354510002282	0	1.36978218117846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37290278-3	7.79907085807127	0	1.37891604724742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33937060-2	4.47587538012658	0	1.3857122405596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127292126-1	4.5507776815084	-0.0110483044046042	0.995280261424185	-0.0111006967914694	0.991143107315432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64109723835872	1.97033474894526
Merged-chr12-102340604-6	17.2104383969801	-0.104699922534669	0.443452758927462	-0.236101637495496	0.813353803310169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21412063064307	4.06574315594204
Merged-chr5-103817953-4	6.30670360991232	0	1.3683526035124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55209162-4	7.08144353698389	0	1.36297945081674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75725094-3	6.72221109708067	0	1.38268647533724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-43034525-6	11.8415552062133	-0.0122818083923234	0.577132661541266	-0.0212807370137814	0.983021709996244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1060018359192	4.0704724313036
Merged-chr1-165718479-4	7.51806865176237	0	1.36242426153905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70408078-7	22.8035517154938	-0.6563167506937	0.436872476696072	-1.50230739106573	0.133017740726152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99575102140151	4.34322707388282
Merged-chr19-43646441-4	11.103750502967	-1.47357181622074	0.502760327526293	-2.93096279786253	0.00337913245738372	0.0932891118592796	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41154139892969	2.87412040564874
Merged-chr15-8716547-3	7.96122738185309	0	1.38314685184395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84293878-1	1.82066049314193	0.31882683606432	1.57008711195682	0.203063150850886	0.839085673017379	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.07599819202159
Merged-chr7-92715285-2	3.27906896636392	0	1.42265480909056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59265362-1	3.31734125799498	0	1.37024414415481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124845349-2	6.16402393141948	-2.78678709264654	1.00366277041643	-2.77661698210672	0.00549278648456099	0.13252657812439	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4727993318842	1.08918047352118
Merged-chr5-123820740-1	5.07204029791096	1.54384328629925	1.1628166740616	1.32767556635284	0.184285308721198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.39284430389808
Merged-chr12-24763202-1	6.14465750550204	-1.40271900178158	0.691575759993999	-2.02829405384849	0.042530245484299	0.528313897230578	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43993490155359	3.18716770297686
Merged-chr7-4300395-1	2.81101840609074	0	1.46078001341395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62875910-2	6.02708976290205	-0.584318987084912	0.802564151500193	-0.72806514718191	0.46657370760714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52965008261298	1.67575558916111
Merged-chr5-139393021-1	4.22765948904686	1.09713033182859	0.8134232990928	1.34878154222065	0.177407145030448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73021936081125	2.8611256832826
Merged-chr14-20827208-1	2.39867723154006	0	1.46520519707247	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165586561-1	2.21539648840782	0	1.60855397560288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68842427-2	4.80242531913554	0	1.39236166962117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124993097-1	3.23779149293263	-0.0410542462038546	1.03398184919436	-0.0397049969840791	0.968328317802982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98033324113269	1.95499531273557
Merged-chr10-83353974-3	5.35856616677057	0	1.40164943689839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117018038-1	2.88915462835178	0	1.43957292676005	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50690780-2	2.73444062377995	0	1.4545899547569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-89012651-1	1.06703157018837	0	2.24696714943529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168197783-1	2.66884043761403	0	1.41771115391295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111536562-3	9.65703034125629	0	1.35325753089059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116184417-1	4.19648196949461	-0.647488779706724	1.06028032434156	-0.610676973666204	0.541413452948836	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95953533891209	2.23050803533398
Merged-chr2-45455030-1	1.44217407863862	0	1.75393332487596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37059803-3	4.62280485271366	-0.0357393585246132	1.38165787178247	-0.0258670103898485	0.979363413132509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr11-77784428-1	3.55860279725512	0	1.39707588365651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148963263-1	3.03596147385669	-3.02417027445362	1.19620984421008	-2.52812689102272	0.011467289856756	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	0
Merged-chr8-61449003-1	3.71106787193268	0	1.39148379564146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191186646-3	5.71629939872645	0	1.37258147139297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139035428-1	2.21363393200238	0	1.45331727382885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112581915-1	2.82452158751531	0	1.4158015890207	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34591896-4	7.65013655388153	-1.87656186252516	1.28627727036637	-1.45890929254363	0.144590075162893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr17-72955707-2	2.28554615147038	0	1.46439650669255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119712440-2	3.07406789635237	0	1.39719991309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92017215-1	1.98403992438818	0	1.53850193538751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78630639-1	3.07191821615749	0	1.47592885736287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90463876-1	2.21853706070274	0	1.52717883183537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55299551-3	4.18317313198941	0	1.40959129291344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83577056-1	5.63716022639845	-1.75754103575921	0.778257603186609	-2.25830242912229	0.0239268109570187	0.363509646957121	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67628675887117	1.52633957112176
Merged-chr7-34984699-1	1.86570419990153	0	1.47295692498424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76215579-2	9.52383456116672	-1.38239870177411	0.664276766753982	-2.08105833435853	0.0374285669489312	0.487091087090483	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51187542435926	2.11642553550219
Merged-chr4-154246594-3	10.5607982078017	1.42651623701384	0.559068992859709	2.55159247826825	0.0107231862019564	0.21081435036244	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98116326404708	4.61309338859878
Merged-chr7-125597238-3	8.23693893908024	0.22336798878023	0.683013468175954	0.327033066239167	0.743642875818942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04845038512503	3.24277697032521
Merged-chr14-54739525-3	10.6083943600278	1.04109028473552	0.716631746402012	1.45275490509947	0.146291816592462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	2.86198534873827
Merged-chr5-138831959-2	5.49427758488527	0	1.3732705934644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120140842-4	4.88673150187416	0	1.37379754262635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18195018-7	23.2426883622772	-1.06318330417689	0.409521256507518	-2.5961614623962	0.00942717535611379	0.192941199240583	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64115958077566	2.96325006704594
Merged-chr17-43266077-6	13.953168736887	-0.191074271822981	0.608994803619863	-0.313753533999366	0.753708237983608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29901922785349	2.56855692027299
Merged-chr7-115251770-3	10.0932309798934	-2.48781925055197	0.8143093272948	-3.05512802956182	0.00224964466070898	0.0683048407923061	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28403812158027	0.815004392037195
Merged-chr3-103730050-1	7.65099353462407	-1.24027734901084	0.766445963707236	-1.61821890614665	0.105615429809975	0.943468953980045	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9941777749128	1.88144263437262
Merged-chr11-106742395-2	4.18848038001685	0	1.410559056602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-114973408-3	5.6246999601892	0	1.35882745759748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46849567-2	4.80805382998068	0	1.37135991682916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78090222-2	4.63457180947183	0	1.36314116956351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80895358-4	6.86439234177117	0	1.35323057801005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59402033-3	6.41680695004471	0	1.39762028027543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24572187-4	6.23861167415929	0	1.36369238821384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102032093-4	11.4167513359592	0	1.35522734678213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84605508-3	6.16998907045064	0	1.37714107551811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83140167-5	15.6347061080966	-0.281201022084814	0.479687454465266	-0.586217170091064	0.55772958472111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95833187971146	3.90578802793512
Merged-chr1-55838297-3	5.92982204046089	0	1.35309994588168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88911053-2	3.58221053628345	0	1.38510688934368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117121434-4	5.14978445915256	0	1.37675088487378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68141852-4	12.872941895666	-1.24643239986389	0.5290368731412	-2.35604069044014	0.0184708942832751	0.304260406771076	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86449630622335	3.53727590704946
Merged-chr3-69060273-2	8.5624895855065	-0.260864152779205	0.815134984104861	-0.320025710914214	0.748948840190856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.45526469271556
Merged-chr19-11720296-1	5.29389719007051	0.141531545080453	0.809227427975762	0.17489711814945	0.861160474757085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64492808120042	1.75658492830106
Merged-chr4-120104799-1	5.52468665022622	-0.310823177038263	1.03925831363528	-0.299081732578127	0.764877684022157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.02748994520012
Merged-chr8-25593661-4	7.37331990066249	0	1.35754551438416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50381756-1	5.44928782723445	-0.0355905322608853	0.875499083941811	-0.0406517070248023	0.967573561953192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57612722179308	1.55528346522961
Merged-chr10-8893862-2	4.70735943654262	-2.15860053732355	1.26567648913183	-1.70549153425787	0.088102789839119	0.840871026385365	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	0
Merged-chr14-48457483-9	30.3649304420431	0.346664578385993	0.372278777224064	0.931196188434201	0.351752089172625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99703181505824	5.53339468610643
Merged-chr4-9111186-3	4.59658940302787	0	1.4043095817068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94128141-3	4.58792851392265	0	1.3597586306559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52901001-4	5.16131883613732	0	1.39019982134502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135679550-1	3.39997326325675	0	1.45081461255783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45512654-3	4.67158326312287	0	1.38981274196077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97630253-4	6.13642326382457	0	1.37983043328422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10356194-3	4.29408861319801	0	1.37485406129353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125543332-4	12.3801366823897	-2.02821917281612	0.582716267055888	-3.4806290599428	0.000500237756785136	0.0214451295118953	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26744357399055	2.03009722200694
Merged-chr10-94358480-1	4.87218854936994	0	1.38382794841163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37448450-4	5.49386349706967	0	1.36348899970504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-137922907-4	5.70421484600285	0	1.3554714319803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114953593-3	6.4710923652821	0	1.37592513883206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54898846-3	4.76228115029603	0	1.39651017879927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54489864-3	4.21273037150686	0	1.37453916926167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33901888-2	4.25045463455506	0	1.37192157873311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5809063-4	6.19023879355637	0	1.38122286993741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118449308-2	4.03385840939682	0	1.458731331725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39538429-4	6.32414465404745	0	1.36167679277476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96666072-4	5.17010665865499	0	1.36277429308954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58705504-4	7.22250492739455	0	1.3505569678297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114880736-2	4.88402492111424	0	1.39168219697495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9810340-2	4.00178947904991	0.549577963701708	1.38520525154799	0.396748397457739	0.691553006955511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.465515277017237
Merged-chrX-169973026-2	6.5311177004042	0	1.36199297057719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74944881-2	3.06629988851777	0	1.41179999425647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77519223-1	2.60939575864264	0	1.40559229107268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49209158-3	6.79130153133498	1.07242004835404	1.17077217427382	0.91599379616211	0.359670148797163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.730937814817307
Merged-chr5-134555659-4	7.72387238520119	0	1.37253688412016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28657292-1	1.87802236548641	0	1.54768725634579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18917523-4	8.59788553115754	0	1.37011470291245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49609796-2	2.35318864886879	0	1.48790541157997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90856555-3	10.2269821900552	-0.33298414266029	0.666289496802819	-0.499758955015965	0.61724481484085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37861092065192	3.2001698902169
Merged-chr9-69442736-2	3.28168742328339	0	1.41222124264729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51161804-1	2.33791714217769	0	1.48855321286327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22548312-4	8.8280768312648	0	1.35582343684652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-135725587-3	4.89771263471929	0	1.38255777445429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137704420-3	4.57655171228036	0	1.37076344520129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9976436-8	18.1349132022332	-0.0117262238822017	0.429177703247691	-0.0273225374791526	0.978202481268274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38366350568037	4.36117195531083
Merged-chr10-69307182-3	11.8027465797451	0	1.3626123997973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46520787-4	7.85254694205814	0.620003679858424	0.944214870509517	0.656634098045774	0.511416218449507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	2.07776144459665
Merged-chr15-100757746-7	21.0859363292286	0.290031690944689	0.432653810365453	0.670355106082865	0.502631446129041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49403659022988	3.92492164346957
Merged-chr2-11534932-4	7.6286875945593	0	1.3537937016378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-17002505-7	16.4777604396828	-0.713794351629713	0.439567885339889	-1.62385464324307	0.104406834680774	0.936852282339422	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39552918688424	3.66981378487606
Merged-chr6-120927878-3	8.92217840909919	0.465266648075437	1.21783939419992	0.382042698151591	0.702429693866027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.878778741524029
Merged-chr4-129276664-3	5.11415293409796	0	1.36387218507424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6376774-3	5.74807609889843	-0.235637810683188	0.891157949167302	-0.264417560212943	0.791458181810457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.25298535761957
Merged-chr12-51695194-4	6.14147358385503	0	1.36163668243875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79679206-4	7.43298970426622	0	1.35635983629707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72798005-2	2.97984440778647	0	1.44437781447185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55812380-5	8.60531356182087	-0.468860982043567	0.978460192353804	-0.479182480500986	0.631808816587423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	0.788686275880602
Merged-chr8-35718548-4	12.4404763394794	2.05283747727247	0.588558543619308	3.48790702221169	0.000486817335322487	0.0210755707298063	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09872908654163	4.61659130281287
Merged-chr10-121470898-2	10.9313240162911	0.723225673065567	0.503312639645031	1.43693127511289	0.150737522241619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18384308032993	4.63762429011698
Merged-chr11-75073161-2	3.91746393758736	0	1.41822361035326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57541149-1	6.05466802708432	0.0617426743083475	0.768835873802668	0.0803067031757607	0.935993327072057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02255929726976	2.46038962464668
Merged-chr8-10831454-1	2.38556819774215	0	1.4329371682508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65693153-1	3.38812817341388	0	1.39710181134013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79023010-3	12.0474534811926	0.270158482395379	0.647454135206267	0.417262733690489	0.676486243499949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71721954100566	4.57885779986126
Merged-chr15-28405348-3	5.64671913474197	0	1.36931708598252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35038783-4	12.229320154733	-0.604692403275742	0.459661290386667	-1.31551735141124	0.188336089769806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66521042336232	3.94057641900635
Merged-chr2-152707774-3	8.13134917797755	0.0771473040912223	0.884501838758937	0.0872211913086233	0.930495695317272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26648457881507	1.20253745507858
Merged-chr1-37344657-2	6.11709945482703	0	1.35743321214565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8594076-4	6.34143533985855	0	1.37003563651519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123160961-4	11.8780862104471	0.304141625516301	0.508232939465016	0.598429581987448	0.549553332143426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39377372231773	3.80708027798349
Merged-chr18-53160375-6	12.0893424317939	1.47400423580144	0.591413092272329	2.49234292419536	0.0126903447607691	0.238085825148119	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28802884991767	4.57422564904322
Merged-chr6-4967392-2	4.27866207678761	0	1.37329159648001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110242172-4	3.6923876154477	0	1.48075394804956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127836806-4	6.11978037330759	0	1.36350012281445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108911709-8	17.6342094312711	0.00732851195653757	0.424345503434428	0.017270153441534	0.986221096154884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15863797896525	4.14734129181502
Merged-chr16-55781414-3	4.56945686286695	0	1.38015920009185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112091023-3	13.2696120173701	-0.434680631269574	0.548616430587596	-0.792321569377733	0.428173198026767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39148447418226	3.04209957979195
Merged-chr13-17755171-3	5.02208025321905	0	1.38288910985056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38378431-4	10.5337402218564	0	1.37989787279551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89488346-6	20.1875540880006	0.0885962847415436	0.585134604135667	0.15141180185782	0.879650880257168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0037679223529	3.17293698852107
Merged-chr4-134124264-6	17.9100959309636	0	1.34747987434972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37218063-3	3.7044780168418	0	1.41553147148727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44109338-3	9.66246344084672	0	1.36002108629921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167367969-3	7.44128284639251	0	1.35541342830405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38434207-4	5.62896402674492	0	1.38380976527874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108261968-3	6.39691296559703	-0.750006678871182	1.06056535175656	-0.707176297650099	0.479456926196429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	0.67591700901439
Merged-chr4-130816892-2	4.19462059626719	0	1.41841483509944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-121408417-6	16.4786668084199	0.352170819290175	0.525417697173048	0.670268285946573	0.502686780172985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39400068267737	3.59695256697144
Merged-chr19-21476411-2	6.74224824950498	-0.644097385122598	0.816368953804883	-0.788978294826902	0.430124692638112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37363547236218	1.91536688454183
Merged-chr7-35151121-8	35.6879326956285	-0.28425346238095	0.40589635645428	-0.700310455762784	0.483733443448734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17829959996157	3.87870701192997
Merged-chr9-52174832-6	15.3827411711846	0.142449432722382	0.777912731520012	0.183117497568192	0.854705826831977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	1.6454950719498
Merged-chr5-90747371-8	18.3994955725594	0.401474371275638	0.451559871978906	0.889083366766461	0.373958277443301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87533107910034	4.2092512508594
Merged-chr7-38156012-3	9.65870047830039	4.10827822887444	0.898729704208111	4.57120556896952	4.84926278652474e-06	0.000489541779837296	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	4.63520123535854
Merged-chr17-34300836-4	17.333869670217	0.0914395490440164	0.4400404154808	0.207798069966158	0.835386639666596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15586940000712	5.42434527761482
Merged-chr2-156434498-6	24.7606991188905	-1.53467284448651	0.373406380069443	-4.10992668149137	3.95784762653947e-05	0.00273373111983557	C57BL6J_F1_Control-BALBCJ_F1_Control	6.1064353503825	4.54544466390247
Merged-chr2-128392076-3	14.7002429096284	0.637207661209089	0.501909078097726	1.26956791382247	0.204238584796305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35228908326008	4.00271082289945
Merged-chr1-152761954-4	5.31875440526631	0	1.36803081317372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60341386-4	6.29738507094856	0	1.35322439014836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80176574-3	7.48275694975162	-0.272776372773673	0.995001052740271	-0.274146818259575	0.783971795746402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	1.36232305499238
Merged-chr11-102276739-1	1.89997231399198	0	1.50099449762742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77471211-2	2.64673320307297	0	1.53121814379343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89858741-1	1.86454409551788	0	1.46156125069702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104987335-1	4.17149569359582	2.81012253800919	1.24917108165827	2.24958981141219	0.0244749958147602	0.369155465453538	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.68020903733389
Merged-chr16-76282075-2	2.58337606939402	0	1.44055872930167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13853472-1	2.49704040416482	0	1.49853102295737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-20508135-2	4.699280269185	0	1.46571940012415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105627851-1	3.55186411666661	-0.207456695751586	1.1237177947806	-0.184616366061989	0.853529948342824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.0754104773304
Merged-chr4-132476049-4	15.5951629756389	0.0236705388399537	0.499505600368896	0.0473879348349096	0.962204044825282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4599694565202	3.4761439076186
Merged-chr1-9773328-3	6.40077105960117	0	1.38559986215405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86267189-1	1.66730591274261	0	1.59896876210505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166843470-1	2.11899583106408	0	1.45743590979936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55695407-2	3.15541321998295	0	1.46588584254553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121718469-1	1.4638935287634	0	1.5496576662585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72738372-2	2.82253829786915	0	1.39496974284918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-49112698-1	2.2348968016351	0	1.44247142932429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85424130-1	3.72382303536179	1.03190666564448	0.980608293690137	1.05231280653491	0.292656057958492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	2.63410904073028
Merged-chr13-52033183-1	2.02171604290749	0	1.46475165216468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107628916-2	4.33212857945717	-2.94066301608686	1.21408265418473	-2.42212752645045	0.0154299346600259	0.272411762969909	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66398411766936	0
Merged-chrX-13516696-1	3.13411906442407	0	1.47157197160018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60541387-1	2.15245552405614	-0.0356471816104404	1.47755075047604	-0.0241258593648682	0.980752216532921	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr11-58636114-2	6.22761453033072	-1.92403332653571	0.835617146838685	-2.30252973364025	0.0213053166122947	0.334721302233448	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68586657330931	1.82070600302968
Merged-chr5-148791045-2	10.4792911659575	-0.234847127411733	0.576039633772108	-0.407692654538148	0.683499330904975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68582411074183	3.22513242564871
Merged-chr16-28840254-3	10.1326321294192	0.209989061750276	0.594520981303336	0.353207150553254	0.72393314757213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61147319683825	4.0346286490112
Merged-chr13-63700856-4	11.1878035900804	0	1.40675185430541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102897598-3	12.7700118443577	-0.422358086884978	0.555081426674867	-0.760893927608155	0.446720425827038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.395428159082	2.53849495235444
Merged-chr5-74277909-1	2.60783962998842	0	1.41015745618683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47509206-1	3.18416159782588	0	1.43737484490196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57098102-1	1.55743590181906	0	1.47251719097415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107971836-1	2.79416447763926	0	1.39014903322144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55497505-4	6.58052150838322	0	1.36667114504717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166160849-2	5.68206271316099	0	1.36327204440064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145037802-4	6.05264152313094	0	1.37681801677835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25312069-3	9.63438673157544	2.23679674299402	0.796298359607825	2.80899328248728	0.0049696683535454	0.122564691840735	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62635771927786	2.98180515756357
Merged-chr9-58226070-3	4.52488187875673	0	1.37523064831698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120055657-4	8.72810804478231	-0.539519563530905	0.757530172444432	-0.712208679147339	0.476335563274664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72065437544902	1.86695701565796
Merged-chr2-84831816-4	8.65560543611435	0.880256544622102	0.720008265148745	1.22256449992314	0.221494228349528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57167815999277	2.45252576491621
Merged-chr11-19972624-4	8.07549032352808	0	1.39183627129041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47702519-2	4.27430562187968	0	1.40359230518013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76748895-2	4.82156942118004	2.51937295663396	1.1869795569121	2.122507453446	0.033795147458268	0.457323978263378	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.32514197764128
Merged-chr11-85518599-3	4.199823260726	0	1.39300755185166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92659564-4	5.78461731460941	0	1.37344251942149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95843136-5	15.2548018224824	1.11409151637489	0.527174000733781	2.11332788571548	0.0345727135547207	0.464722585588789	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09760506888322	4.02417998196345
Merged-chr10-8769529-6	16.0783188675331	0.534607076795271	0.580403314465624	0.921095837103347	0.35700039346583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82286752253771	3.04305609909876
Merged-chr2-53668795-4	6.21927263964852	0	1.36195787325549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120191418-2	5.0012373465325	0	1.37712190520359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98299227-3	5.13720869566222	0	1.38452273050817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11544550-3	6.37016603766605	0	1.3853817562537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-111210751-3	10.1897714326242	0.351083187938122	0.572930988925875	0.612784427311794	0.540018889087388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54730534576741	3.06834339180086
Merged-chr12-34747489-2	6.78948764565298	-1.30280088724072	1.3316938909155	-0.978303569707809	0.327924204912839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr13-59879400-4	15.5533436500479	0.166289933978444	0.429079518258303	0.387550388453494	0.698348789047734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73853988941583	4.8022433793138
Merged-chr4-40772984-2	4.67941162154041	0	1.41225286015684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56690844-2	4.25526212051524	0	1.40169110794677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53436510-2	2.96972148290698	0	1.41770457005815	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34350378-2	4.02791194485457	0	1.39320257484905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134994354-5	12.9473772868797	-1.19412922345568	0.635061359288547	-1.88033676744787	0.0600621953797518	0.667469731513787	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69735711339692	1.73795749839718
Merged-chr15-67088769-5	14.140009902646	-0.127915306059125	0.575078976477183	-0.222430850876705	0.823978497760131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09163890315488	3.07970727795238
Merged-chr11-103359767-4	8.67835470010857	0	1.34537963157862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59263616-3	4.45772492267667	1.80464716894449	1.26358800540801	1.42819270301777	0.153236400337555	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr8-47670821-3	7.50343353179182	0	1.38089660606002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90685205-1	1.67092429772545	0	1.53314159765046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-117429121-1	3.11364669906717	0	1.38160463302452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81402350-3	7.01709877437233	0	1.37310541825709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-151743817-1	2.30671615790062	-1.78046296333768	1.46340166568035	-1.21666047339773	0.223733423798082	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.303163067301871
Merged-chr6-119341598-2	4.20391060932154	0	1.43783713370947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76964667-2	5.56258241732995	-0.184653295633836	0.851255593667383	-0.216918745682846	0.828271668465145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.90216338684418
Merged-chr3-52360996-4	6.88402789316046	0	1.3590741105086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140697830-2	3.95117279036335	0	1.39946975234029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102988033-2	3.44267482926983	0	1.39170819739201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143488171-2	4.36231114128269	0	1.38356230548017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122566240-4	7.97287336360689	0	1.40164567889204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44461399-4	5.59746514058029	0	1.37763341729772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103321655-3	5.71002029758453	1.74951012998243	1.25034640033483	1.39922035166728	0.161746915445027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr4-102792489-6	18.2692612425766	-0.441007323394009	0.51972773236544	-0.848535292482564	0.3961399261922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60408270238959	3.26649838118717
Merged-chr1-77757700-1	3.1740151328137	0	1.50974262029024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-93725926-1	2.97190512260995	0	1.49057823342298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84268724-4	6.22553515503261	0	1.36292063342726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29150314-2	2.1239930338608	0	1.61252674569805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126909614-2	3.64393728712043	0	1.46334652751067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-98325924-1	4.67589105234653	-1.85189707751867	0.973883573688968	-1.90155900309919	0.0572288319079436	0.646891676790165	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48395282305067	1.54726712393679
Merged-chr11-35839136-3	4.6204915402293	0	1.43666609433736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122429773-2	5.28833551858239	0	1.38711989640089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122111101-2	4.08564310147941	-1.15966604140513	1.17019679431325	-0.991000870144839	0.321685155379115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86728154592049	1.02186287315087
Merged-chr1-86191068-2	2.69174140304835	0	1.40124671421792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34315678-2	3.4403224765919	0	1.45122511004127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118892725-1	2.4464892304962	0	1.43929935342932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121409102-4	5.8203808968996	0	1.37194402285469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23015609-3	6.88498441138513	-1.28759167294257	1.34181811232563	-0.959587339830223	0.337262943264286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr1-184622062-4	5.62321186695748	0	1.37076764457402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80213473-2	4.93375289547567	0	1.3676159528297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70852095-4	7.77181795415558	0	1.36735283826802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43739654-3	6.61692409190734	0	1.36466290267856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46591001-4	13.6939079967702	-0.160544735369398	0.460062419772486	-0.348962941699938	0.727117131007408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23146167096622	3.78121184944302
Merged-chr16-32773626-1	4.69699447050069	0.598043152652617	1.09064058932416	0.5483411845356	0.583457653370015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	1.38992070941417
Merged-chr10-77130730-3	3.95859090530863	0	1.39091665738627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38951059-4	5.58494919154204	0	1.38865212443216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86274427-1	2.46355624180908	0	1.38778664223472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39374590-3	2.88936098134835	0	1.45377201148066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-117481626-3	4.90182183671738	0	1.38457751793756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79936356-2	3.39743608553573	0	1.45266855493712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65549140-4	6.4305200420567	0	1.37021360786036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65416444-3	5.50137494860829	-1.86263214097142	1.26243947810116	-1.47542291989555	0.140098877116034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr11-69628989-3	5.33473184183339	0	1.37218479158373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19300871-4	4.26369534909992	0	1.39226878691002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51362769-4	7.49556031831603	0	1.36222971999307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91343053-4	12.5624969093468	0.234136691457809	0.437899462009911	0.534681386414926	0.592870194770479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5922031765631	3.81823208090082
Merged-chr10-86929136-4	7.31270586458279	0	1.41167790927851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3172467-3	9.45401956946431	0	1.41273675750628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15256989-4	11.9302666064115	0	1.35757371477063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99284657-2	5.4294943510922	0	1.38490998827062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140159514-7	33.5977252720457	0.801755880901945	0.401712122229423	1.99584686778273	0.045950593538777	0.557550962985352	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89396735656453	5.86322307736343
Merged-chrX-94625346-3	5.41175199177671	-3.81251778128024	1.12106662098833	-3.40079501958514	0.000671901900458928	0.0268280177965452	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41476118703329	0
Merged-chr11-108357513-2	5.12607864672553	0.517208310472686	1.08249200027371	0.477794117962914	0.63279674808481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.28051966905443
Merged-chr11-34030661-2	3.58015449412959	0	1.40743110453932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101574598-1	6.24112459593932	3.58538948021526	1.07773304919622	3.32678809737649	0.000878531528225547	0.0324650546178195	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	2.96646891299993
Merged-chr8-46140124-3	6.93015396367698	0	1.3700288503634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45042319-3	4.51302839299111	0	1.39238989599242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88127911-3	6.18450858430797	-2.71405919873399	0.960921201818113	-2.82443471285559	0.0047364096576803	0.118484350014654	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98897327079264	1.60294768781932
Merged-chr16-8784917-3	4.66104879458197	0	1.38413746363265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-109478438-4	6.19659700789282	0	1.36383007495468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22850329-4	7.98853474729983	0	1.36739887764802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128363455-6	10.9798947003535	-0.67650024459243	0.651081605696966	-1.03904063434299	0.298785838558835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49690686312675	2.6722646066241
Merged-chr10-118178964-5	11.9770225290019	-0.612455045114334	0.940647644789601	-0.651099323436168	0.514982373231213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43750690265746	1.02748994520012
Merged-chr3-59224962-6	17.6035775480055	0.700322094472513	0.413887060039622	1.69206085932107	0.0906343703178331	0.855346134740814	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81228348077634	4.54384078368671
Merged-chr5-64861524-4	7.10409156209764	0	1.37562860775069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105122552-7	19.9180480045874	-0.677173963325715	0.394641553136034	-1.71592159503865	0.0861763936439332	0.828961702723512	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72839213316409	4.06935338327191
Merged-chr3-31408333-2	3.41523762985643	0	1.39913221772223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18929752-1	1.67599794577481	0.11188360340179	1.65983998581628	0.0674062586501477	0.946258286840907	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	1.25163494309627
Merged-chr18-74875645-1	2.51013691205483	0	2.03595470381038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34001843-1	3.58238736461163	0	1.392910295469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121455742-1	6.4273687694195	-0.65777087484142	0.668998651704846	-0.983217041118375	0.32550062943264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67549401654471	3.0446217643527
Merged-chr11-11762890-1	1.80952823471335	0	1.44058371071857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37226742-1	1.8181045987487	0	1.5163272583697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85588799-3	3.46279819902997	0	1.39442809995981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173482557-1	6.96351399031885	3.94873384034546	1.12009884505023	3.52534408708224	0.000422933054554717	0.0190631989324543	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.17742123580514
Merged-chr15-81417137-2	4.41970727002765	0	1.38733834916855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101645703-1	2.32025188719059	0	1.42830903231587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118147546-1	3.99107653780968	0	1.43958620650757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21091293-1	1.67706769266262	0	1.56150787184867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77096466-2	1.80954356745401	0	2.29748200824453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6795191-3	9.20460007184435	0	1.34657628213782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58359715-1	3.38124327456768	0	1.45004865829719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45699911-1	3.29951103528084	1.21785660087185	1.33573534325704	0.91174992637557	0.3619003753483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.948471875794396
Merged-chr15-33250968-1	1.93148748983234	0	1.7065812492088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127252971-1	2.74969762825528	0	1.42663767384959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-142467351-1	3.99139687451963	0	1.40330182494475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13052311-2	3.29375020411831	0	1.38649054286267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86519669-1	2.44727856574144	1.75402237623489	1.55693856199921	1.12658419480766	0.259918324643388	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr16-4375223-2	3.79796980577571	0	1.40392787804117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128924358-2	3.70484882597815	0	1.40537504145231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10772417-1	2.83456088292416	0	1.45358265119257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128558827-2	8.30689609769502	-0.285653177251838	0.686795890756725	-0.415921500254027	0.677467446170389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32426417345237	2.70183972804649
Merged-chr3-68798615-1	1.23174528911854	0	1.61284613864769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95810660-4	5.72245459306857	0	1.39994694786864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34043084-4	7.4334789762443	0	1.35840844194427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71634449-7	15.6124922442142	-0.691562161300224	0.498789557978233	-1.38648083192311	0.165600129314137	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53570191869317	2.99657533785759
Merged-chr19-5718216-4	9.93171171283642	2.77631385662484	0.732168634287211	3.79190493366008	0.000149496144672938	0.00816729741535298	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89082683942207	4.88851314561931
Merged-chr9-56118714-3	4.81050001090407	0	1.37863881192746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155150692-7	23.4861335170201	-0.193915321234714	0.397131161975753	-0.488290368023433	0.625344182998588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62941812389388	4.67749246287174
Merged-chr1-21068649-4	12.150267909386	-1.05290379903375	0.584134472317621	-1.80250241841785	0.0714663945502762	0.741240553588717	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94604828874349	2.95487726357169
Merged-chr9-118856845-3	6.04811205021721	0	1.37746118328223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5414967-2	4.17860572774807	0	1.39521395487284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103013010-2	9.31770967238532	0.289809954716889	0.779346780982789	0.37186264418957	0.709995119404483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80435620208164	2.20779883596217
Merged-chr14-9487670-3	9.06323656137247	-1.35225111604518	0.830075537191743	-1.62906995262145	0.10329821122013	0.930403600283911	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89914403434115	0.788686275880602
Merged-chr17-34684383-1	6.08487719291966	0.700534223154574	0.823660736212507	0.85051307213682	0.395039895850736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17564474993106	2.01473438434858
Merged-chr10-44325831-3	5.92850160707288	0	1.36402064617484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33755566-4	8.55557059058649	0	1.35438148187072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100952873-3	7.53406287861691	-0.544587053022759	0.749429921325617	-0.726668414919269	0.467429106653738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76501444179017	1.97656658922368
Merged-chr4-102793036-4	6.12442012589429	0	1.3736695599682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9712322-3	6.07059296432062	0	1.39420589567862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-48595888-1	3.48603004303102	3.38819768869936	1.16792199147072	2.90104794108102	0.00371916973450931	0.0997387013311256	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.01161228884919
Merged-chr3-51270150-3	4.11385492133154	0	1.38845382528792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30325605-8	19.4087502675302	-0.986351910700975	0.441728912264072	-2.23293491396216	0.025553236773137	0.380409225180011	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59294594264445	3.76796699124416
Merged-chr15-25858252-2	5.17520219313366	0	1.37403131797609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135241877-2	3.96870120876598	0	1.40417274987073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103488513-5	10.5161378684667	0.202440089012833	0.696759724724249	0.290545049935185	0.77139929149205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97260420973384	2.47883038275468
Merged-chr8-26104700-4	8.39027224670908	-0.177279890412219	0.688064270452671	-0.257650190578255	0.796676890563572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31776252764976	2.03845169603776
Merged-chr16-59570970-3	10.725819905104	3.28507963275466	0.752332480491822	4.36652639349973	1.2623803992288e-05	0.00107271554307999	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	4.53785246717711
Merged-chr4-56262234-2	3.45142033337867	0	1.43964966050562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50149900-3	5.40670514967361	0	1.36347017284899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153351529-1	2.25941764447862	0	1.39935774493211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132304233-4	5.35713877654484	0	1.36589012303164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126569499-1	2.80508215634027	0	1.52490183208453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148489879-3	12.3595719361322	-1.0340076983581	0.806569589878091	-1.28198200295945	0.199848959570926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0440319008787	1.30139522650344
Merged-chr13-52268482-3	5.38674654387555	0	1.36240385520151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122498145-3	3.80020179773912	0	1.41383832496593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41636681-1	3.44584105334579	0	1.37478510105041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83932764-3	4.91456384881898	0	1.38364477701752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64744066-2	3.6750642743632	0	1.40659285202999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73593564-2	6.03026626256379	0	1.36681718079858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17590870-2	9.23703640573716	-1.03318709223271	0.84014586456298	-1.22977108596511	0.218782838549937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	1.39234354082305
Merged-chr12-69419804-5	16.0029324477769	1.92545198373402	0.56402339127263	3.41378037423154	0.000640681994662786	0.0258359291898178	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67333134268571	4.09394245650046
Merged-chr19-16456328-2	5.20303166006524	0	1.38404411672126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113812852-3	5.80786467528597	0	1.36350573606169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47882674-8	19.8546810947763	-0.0115814788662788	0.421651756519204	-0.0274669290171718	0.97808731671144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53481343275733	4.44559467235581
Merged-chr5-21138775-1	4.40043060818024	0	1.40069455031023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-80955573-1	2.76261601418578	0	1.4284342635655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149395290-3	5.19529336905014	0	1.36377797271008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68060448-4	6.91987634786405	0	1.36034661195154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65493065-4	5.60996082471315	0	1.36576198488661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150837593-4	7.27135709726436	0	1.39207815724994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23272997-3	8.37886361609143	0	1.36983432608738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84329667-4	12.2683619161746	0	1.38720173323696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33822624-4	8.15299489315636	0	1.35866247322414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36252537-9	27.2027195143017	0.237072932765778	0.374948929593795	0.632280596247102	0.52720354044915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80837374492136	5.0608874216842
Merged-chr4-132488748-4	10.137160145288	0	1.36028520249265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44238034-2	2.6849406640311	0	2.44882251955312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45092506-3	3.69900842817337	0	1.38015761309367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52577810-2	4.3345359838206	0	1.37831646668839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102660528-2	2.90574939365468	0	1.44461399070954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155765193-2	7.22511392281056	0.787373546908245	0.817810161977842	0.962782786904987	0.335656540679624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46261730325446	2.21873676320828
Merged-chr19-10022048-2	5.15149577781981	1.66897811898595	1.06473640418288	1.56750357405764	0.116997031466669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.55809314683451
Merged-chr9-104445015-1	6.42761086731398	0.77359884255113	0.925999389739776	0.835420466927658	0.403481010065728	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67800608098903	2.8861517284058
Merged-chr7-48983481-1	4.52779272751568	0	1.40080700587323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104629956-1	6.34956954399978	0.806337028467104	0.74830785233263	1.07754719658973	0.28123587758148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09093093088911	2.58324390864635
Merged-chr19-32304248-2	4.39077121323562	0	1.36426349125737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50244652-4	4.97242480338139	0	1.36981852747883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97440115-2	3.82215196930099	0	1.4030301910071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52891977-4	5.72737653223094	0	1.41042693451643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38436497-1	2.8622772011934	0	1.4226798651642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36453665-2	1.98577516326164	0	2.30386411879619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40581432-2	2.76690342235212	0	1.40343449445016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20508750-2	5.45764238248575	-4.81254379001175	1.14189956628606	-4.21450706533167	2.50324316532774e-05	0.00187687993412484	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18972617322721	0.303163067301871
Merged-chr1-62051628-1	1.98988641360366	0	1.57069638634614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117505341-3	5.89664142136877	0	1.36423830952429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58791692-4	7.26697936481972	0	1.39128600327367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20846392-4	7.38439090416771	0	1.35808835874028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4898801-4	10.5162163809177	0.581651759196506	1.34512530097126	0.432414555563352	0.66544014099219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.716426531808663
Merged-chr16-14367025-3	7.6844053778996	-0.0382834710573158	0.862188115018397	-0.0444026893788706	0.964583417950617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74374772464511	1.71968126597395
Merged-chr11-94689140-4	4.6180462033941	0	1.36441630458248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117949858-4	7.426635440315	0	1.37800505605123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157048117-13	40.0903863798048	0.672405911894473	0.292165987892434	2.30145170813665	0.0213661120425245	0.335288823475632	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01009634164123	5.72666046446726
Merged-chr4-134478163-3	6.59786409563136	-0.362979356458693	0.730080489370937	-0.497177176685613	0.619064114581411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31480678761111	2.02497645810754
Merged-chr9-54555243-4	7.28833217053622	0	1.3499899720819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17183479-4	8.42368566013002	0.292263681808986	0.752410021152439	0.388436721458515	0.697692873624677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6950503635711	2.70089346712193
Merged-chr6-125148632-12	45.2110907530625	-0.121405846723445	0.308748193179924	-0.393219618463306	0.694157280960253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.36462595846232	5.27778616053632
Merged-chr6-37601288-3	7.58017331966575	0	1.3880561630965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91425659-6	14.8089356847881	-0.444366003138403	0.535723277898525	-0.829469282875877	0.406838911344644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14628950319902	2.47013447551696
Merged-chr13-109260482-2	9.26287268399417	1.01904444351191	0.701284802583239	1.45311069020486	0.146193023399224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	2.97402223991736
Merged-chr10-41576021-4	5.67119812893911	0	1.36444137361075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103039966-1	3.9543873311826	0.816116210177556	1.22274169367205	0.667447764643284	0.504486164673669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.662147012823607
Merged-chr5-146761047-1	5.1503186736557	0.0323743857579224	0.739169428267003	0.0437983289349843	0.965065159124442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	2.70089346712193
Merged-chr1-176827102-1	3.20794125266412	0	1.39768098819081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81135062-8	30.9076653797565	0.198839560596122	0.389154721077512	0.510952456250728	0.609384348556373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93385738394914	4.07355198300366
Merged-chr10-43833069-2	4.72796939969886	0	1.37383971922151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120528180-4	10.595356562521	0.27657688733734	0.712404934870698	0.38822988696385	0.697845917737516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51541939634152	1.59411452029292
Merged-chr10-127555943-4	7.04661041572679	0	1.36722341938648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26066669-7	23.3295110356533	-0.367442254517608	0.371011444971941	-0.990379837326573	0.321988496773853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3116340320494	5.01112262987362
Merged-chr2-169790850-2	6.92068741781731	3.32057915041716	1.15307839797138	2.87975141695404	0.00397988832291836	0.104665094022989	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.30206268209262
Merged-chr11-74523755-4	4.91513971990307	0	1.3661265999893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191138594-4	7.94811675179348	0	1.37776183061367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154692740-2	6.47172125001489	4.06587925230631	1.34698502849267	3.01850367027181	0.00254026324707028	0.0747288530715263	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.26383939795191
Merged-chr6-91488665-2	3.34396022005012	0	1.40817514760616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64810661-2	4.12172053910556	-1.89289900544136	1.30925639019904	-1.44578175795925	0.148238424216901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr14-7977668-2	3.69001100244061	0	1.39750508247111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50121284-4	8.22458471568846	2.63669362063327	1.05792001634406	2.49233739781679	0.0126905422367415	0.238085825148119	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	2.89948922819089
Merged-chr2-69109477-3	5.37908972552131	0	1.39167795860125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40747509-4	16.0932127571195	-1.49461518840245	0.715784507911386	-2.08807982274392	0.0367906348222282	0.4818327400012	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2374388646987	1.74618975104912
Merged-chr12-108907005-1	3.3184899686419	0	1.45486877178593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56339279-4	5.86825771636759	0	1.36787573018767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-72261044-1	4.39453135207061	0	1.39738480100025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52505875-2	5.93552680447028	0	1.36964820251986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109193924-8	21.7928850778093	0.682285437305634	0.398748143549466	1.71106862399973	0.0870684454270989	0.834883334798319	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06168414350596	4.78062802751139
Merged-chr7-98085585-5	14.7699545970785	-0.627963978042232	0.549362917156053	-1.14307675023476	0.253006726425267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49336892419824	2.83184297529279
Merged-chr9-116060886-4	5.17744258762582	0	1.37600452684564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-31237471-6	20.5861326747451	-3.16630179504394	0.8587703184822	-3.68701820137437	0.000226897133770849	0.0115055049390388	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17358968702343	0.724326877898254
Merged-chr10-117825058-3	5.03430108799617	0	1.3649924069237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31353655-3	6.51296435422443	0	1.39001231730262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45080050-4	7.62687182628442	0.321732916053298	0.70731029726083	0.454868135384511	0.649204108301433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85111348754977	2.22590269144367
Merged-chr2-92455892-4	6.41358491682905	0	1.357223465027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13360853-4	7.08099582647641	0.012724437287748	0.880687736924162	0.014448296205632	0.988472328602185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	1.39949824061849
Merged-chr1-131046716-5	13.2760655402337	-3.37673340378209	1.07435263518374	-3.14304009056075	0.00167202937817572	0.0539222293272066	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69934358707113	0.303163067301871
Merged-chr1-154126733-2	2.93208746627648	0	1.43416490784883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64242844-1	2.8449464171761	0	1.4257234490197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140841562-1	1.74230787937873	0	1.48406353420124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32470632-2	4.08216861753054	0	1.47203671368317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154981812-2	10.6302462518406	0.332761707567692	0.60569118733676	0.549391694191315	0.582736672832718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40445353918784	2.64893775750897
Merged-chr16-57593894-1	2.95747742496795	0	1.42739351806154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35041685-1	7.73592647872415	0.733685884469332	0.588440390179346	1.24683127928339	0.212459368728653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70552459427422	4.25010574367603
Merged-chr18-6166073-1	5.20730719098992	0.391565334366184	1.24317024229685	0.314973220114034	0.752781986992488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	0.577068348605183
Merged-chr15-58622639-2	3.29128271935847	0	1.44570564196673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94496751-2	3.66006191004678	-0.681875953817346	1.35713213605802	-0.502438882479014	0.615358833881847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.376242425970964
Merged-chr1-133136085-1	2.34405028761885	0	1.52785921016298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25376976-1	2.03224893473215	0	1.54516654306303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56598725-1	2.14771733018437	0	1.48591281062741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59734595-1	1.83821330159031	0	1.56344255345053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27383662-1	3.01104747870233	0	1.39134892101722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75172523-1	2.79218307997889	0	1.39185758314777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-47880277-1	1.71388058592254	0	1.61616265380024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31418914-1	1.61404722564	0	1.7267676775446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76614544-4	5.32657218697769	0	1.3745736283772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39636740-1	3.40029021093315	0	1.38338767107558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22590436-2	3.00649569647482	0	2.09491342779187	0	NA	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45247851-3	5.6074056128143	0	1.38818274761959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9144336-3	5.36095125320455	0	1.39278176194596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59907978-2	4.13358979315529	0	1.3834994416019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53494683-2	5.66322635106199	0	1.35476490126179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86228406-2	5.52383789055084	0	1.35993723096262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-88437180-1	2.47926490745957	0	1.41875093574302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66091495-1	2.14005811065501	0	1.59703787607076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88505274-1	2.17443804616083	0	1.55800362709955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101544290-1	3.54286336152596	0	1.38546029995298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3722668-2	2.93744195937328	0	1.44094455768493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22918739-1	2.44831977092553	3.44414504873618	1.3488768467548	2.55334284743806	0.0106694414639161	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.93960303562856
Merged-chr5-3508655-1	2.69444482162811	0	1.46119411997762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163787902-4	4.96471613992945	0	1.37152656339741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155293620-2	3.11175444373935	0	1.40535937718459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121922319-3	8.87602554791193	0.166579046288376	0.76754591781111	0.217028118348186	0.828186431865852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10901284649434	3.38752991030882
Merged-chr8-68954125-5	15.0101348383952	-0.33669676775039	0.529620270514751	-0.635732403941311	0.524950852172759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10199903093896	3.85155902915376
Merged-chr15-35757584-3	15.4841675742729	-0.27760492865074	0.530924418064717	-0.52287090065031	0.601064095929498	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70612360197456	2.81099487747951
Merged-chr16-58690622-4	9.67090857503751	1.26781476477165	1.32622552387469	0.955957144504066	0.339093886427307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr18-77861958-4	13.875635587195	0	1.36648530133142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-89746883-4	10.9377515806212	3.01631999633807	0.644688336383349	4.67872586816041	2.88663067352687e-06	0.000313202308946601	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	5.03287102256571
Merged-chr16-85122172-8	21.548962357133	0.478460035850691	0.359797984888524	1.32980187757008	0.18358355716669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28468559366106	4.89228050378361
Merged-chr1-151002164-4	8.47314886339574	0	1.37295081135086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45056493-4	6.48137057786872	0	1.36334285993949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39635037-3	6.51662132120192	0	1.35960702967652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41048977-3	10.6962252451071	-0.317234160475723	0.648385081301583	-0.48926813651989	0.624651876365316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95941903017561	2.92595059835382
Merged-chr7-118652911-2	6.31754775356087	1.29156926348041	0.926824990485778	1.3935416898971	0.16345604728757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	2.09906462022006
Merged-chrX-142540455-3	5.19698829559585	0	1.38866710144393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47327526-2	9.76276756180874	-1.51779461301294	0.982839387391395	-1.54429567280713	0.122516720392983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	0.724326877898254
Merged-chr11-89069481-3	10.690091775549	-0.3363734938512	0.511830309032944	-0.657197293545876	0.511054065607182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33475492941006	3.94429204965692
Merged-chr10-121498901-11	33.2189024550083	-0.206271096173544	0.361360934646998	-0.570817364015963	0.568123451254398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6479297355928	4.45547288686461
Merged-chr7-68282778-4	6.71278290348472	0	1.3651216967322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113523156-3	4.57243398344658	0	1.37870822736216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-53013347-3	4.64807386835017	0	1.37471056906783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101805844-4	6.32674123605052	0	1.38394038168386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105651970-7	29.8627697711022	-1.47854461984277	0.34658097858256	-4.26608703654107	1.98931198748672e-05	0.00156267355965015	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44828589261493	3.83254561822084
Merged-chr15-34031589-1	6.83162579979662	3.32131567007037	0.921852678830182	3.60287033529595	0.000314722544204977	0.0151444801014269	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	5.24968595961368
Merged-chr11-53803266-4	8.66129825520075	0	1.34773963375608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-22006098-1	3.01025951325552	0	1.40699389293982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-19963188-4	5.6381856034001	0	1.38407240478488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44163288-3	4.5424798050172	0	1.36787449976795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159071895-3	6.23113219546589	0	1.36053663599705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170169321-1	4.89211195541258	0	1.37255279446389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74807511-2	6.02423827357392	-0.0399866010770109	0.944314773156922	-0.0423445679488127	0.966224017042318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32821868412348	2.3017310831097
Merged-chr12-35269198-5	15.0064731999914	2.18449582539606	0.63766729216344	3.42576113318378	0.00061307928823909	0.0249448929860694	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	3.46603751707371
Merged-chr11-104544744-6	13.0325816733343	0.129164377049117	0.553165388737904	0.233500467814548	0.815372806329856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33773048058368	3.54294580838872
Merged-chr14-68593596-4	6.93303169831835	0	1.35755162144803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28593012-2	6.44929680455386	0	1.37270446992487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93356282-4	13.8548482438907	-1.53182226270706	0.507922967931509	-3.01585547301657	0.00256255371495291	0.0751336879132284	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47894895176984	3.09538363222509
Merged-chr6-89340855-3	5.02993424073848	0	1.40298426243686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127564000-1	5.22884273471235	0.451940610233421	0.690520350850772	0.654492817882336	0.512794352810378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	2.85476293333406
Merged-chr6-55416117-1	3.05925826963563	0	1.62344410440279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84196453-3	6.62396792639751	0	1.37393065048659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92437335-1	3.16872771361294	0	1.44351532749523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81041831-2	3.78665174685658	0	1.45302535122902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98804257-3	4.48790592802924	0	1.37756928983486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153164702-5	12.0556758285288	0	1.34562382321929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106760274-1	5.12552555313288	0.98049962430094	0.699208205163619	1.40229994021809	0.160825698268156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31711242604998	3.59311006761562
Merged-chr11-118494701-1	3.61856509380081	0	1.39245416718817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-26438088-2	4.41062465335052	0	1.39295712096613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105254516-7	17.7851643807075	-0.176086600021906	0.442864929290381	-0.397607912426156	0.690919227128585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17766001640466	4.05153688716337
Merged-chr9-3027767-3	6.53659672454693	0	1.42102702889703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46298831-4	6.2846784855799	0	1.36898524989347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87690975-3	5.26103580333043	0	1.37037809810236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6580258-2	5.2948075752573	0	1.3754357713034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44504744-2	9.77796191282292	-1.25880854270748	0.674991567102447	-1.86492484359649	0.0621919395722134	0.682830063261149	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86433660111735	1.50727524202336
Merged-chr11-93987171-2	6.91170364870713	2.41973174843609	1.1164688963857	2.16730780075413	0.0302113920924644	0.425311569497065	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.9134233865196
Merged-chr12-33041599-3	6.88012280070308	-0.469079701531035	0.898772903962386	-0.521911263082166	0.601732115906141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961371261847668	1.44790810950236
Merged-chr9-14832278-4	5.89064746397748	0	1.3730048636097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69571177-3	4.78591966416804	0	1.36749437443212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121744145-3	5.20146698525725	0	1.36818615253364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30393330-10	29.8979092407474	-0.122174797908342	0.299377478541446	-0.408096155073429	0.683203082729627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.0312957512269	5.03827472707399
Merged-chr3-88477934-3	5.14792072604418	0	1.36756164185469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17675559-4	8.98355577741341	0	1.34478584549707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11012183-2	5.26527399007195	0	1.37559457467806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86787973-1	4.26309248952683	-0.518175983791097	0.824211923196531	-0.628692656836923	0.529550286450499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13938900109644	2.15620955717331
Merged-chr19-26666549-4	7.24180446214416	0	1.36613018602499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12299869-2	2.94445752968026	0	1.41043042774789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101119734-3	4.37068042079354	0	1.38153456401688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25142811-2	5.44951951242028	1.09468024056927	0.990451084414989	1.10523402699472	0.269058196204166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.70266130792036
Merged-chr12-85388795-1	3.48782348490693	0	1.38312956078273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20806863-4	4.53632653528874	0	1.38078194287889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120332847-4	7.45992672351877	0	1.37316758546297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27207454-2	3.3325718186063	0	1.48144663365572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95232610-3	7.83090349068923	-1.80438976396992	0.640829765887727	-2.81570841434049	0.00486698174380774	0.120805598452806	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38405467869391	1.69376326265794
Merged-chr14-104039055-1	3.83307205773767	0	1.39468165499301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8712410-3	4.45055288777772	0	1.39133612898362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106510320-2	3.84779164319519	0	1.45777552078914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63079523-2	4.36601991951887	0	1.36353872185064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192536606-3	10.0555007634671	0.600238098426663	0.570034784092893	1.0529850373637	0.292347849751994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59016101190973	3.5040287746662
Merged-chrX-36101057-3	6.96181010951736	0	1.3597482921971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110260132-4	5.5889096212601	0	1.37400877491679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20470574-3	7.27970419890421	0	1.3522546200067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54648768-2	3.97372161275227	0	1.38498292464312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95830548-2	9.48214868844346	0.224224798634719	0.565766062763487	0.396320693997607	0.691868462864711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7226738954285	4.01795443511504
Merged-chr4-7154437-2	3.71571768762836	0	1.43637563953689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46610552-2	11.6395779996492	2.03347620830622	0.695838229666241	2.92234045444956	0.00347411559680519	0.0951382618270698	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63228283149594	5.14304182023431
Merged-chr18-9494517-4	11.2728446299001	0	1.37469994952797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154062034-3	5.48132661271526	0	1.38224440509176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167367546-3	4.88953894914805	0	1.43345984001126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103985289-3	4.41985665038586	0	1.47433321308528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6761010-3	5.32251966592343	0	1.40733468729708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90741178-1	1.88226563586967	0	1.5715307769393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25131018-3	4.65883883320216	0	1.40602699310074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31412038-1	2.19134463588399	0	1.5023303175324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173452361-1	8.53089257504531	0.0949461072535142	0.562481027561149	0.16879877293851	0.865954923529175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23390106434252	3.38550135478597
Merged-chr3-55667298-1	2.53272323849397	0	1.44720103535344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45054669-3	4.51003069005898	0	1.3968693394366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155912084-3	7.15777499143583	-1.20475039789367	0.700676154538379	-1.71941115748028	0.0855395320338766	0.825689923646582	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15179372168441	2.71399066802651
Merged-chr11-121685886-3	5.16069429335722	0	1.41056358435151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55689725-4	7.51291283712503	0	1.36768007711531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146796049-8	22.5759320925162	0.728885850439064	0.465105532661434	1.56714078688383	0.117081787387905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31613769901214	5.0191076375666
Merged-chr2-9989850-4	6.09746844799069	0	1.36801936232725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-141018475-3	3.80725668320245	0	1.36972536786238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128632759-5	14.8840953964284	0.259804790481912	0.549779396622546	0.472561889510535	0.636525777443607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07924212730528	4.66359730118776
Merged-chr6-137018599-2	13.5113611251934	0.0210175598614155	0.768148873956962	0.0273613105141297	0.978171556423863	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26097521563779	3.27097976324952
Merged-chr4-106881290-4	11.1720532104591	0.625963687966391	0.651497687423364	0.960807229327308	0.336649102969976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21307952544685	2.86241997015789
Merged-chr19-32989631-1	3.49025178202366	0	1.37666941385135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76262670-2	4.08014853687542	-1.26283129425609	0.97753642483556	-1.29185088368295	0.196408789913542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25838937565246	1.18984215491549
Merged-chr9-114770438-2	5.90270745987296	0	1.36880437480509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4974784-2	6.03912001723544	0	1.37206061747427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64038126-3	4.76021397133913	0	1.37537882432978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26980810-1	4.01399449166729	0	1.40928445104002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32734120-1	4.18416503862631	0	1.46067279327038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-45655-1	2.23241215693508	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67305611-2	8.73904386090207	0.193577543223009	0.624593689358952	0.309925550835594	0.756617572078023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23923293276716	4.00780766894657
Merged-chr3-139049076-7	14.0039987979547	-1.77329145198138	0.663471731621525	-2.67274605301941	0.00752331788577755	0.165036334525013	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08151531857281	1.62805269464997
Merged-chr1-191402997-1	5.24669861957122	0.930490023318423	0.864341987017589	1.0765299352506	0.281690320335383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	2.24905358779761
Merged-chr1-135540483-3	5.49228810128145	0	1.35956494106577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116099196-7	24.6575285570112	-0.567950487168769	0.413041760737549	-1.37504373929311	0.169117884856606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.06671366330387	4.46211978133536
Merged-chr12-24592533-6	11.3069302668062	0.939268292712457	0.671320122146706	1.39913621195939	0.161772140489315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85297260998396	2.45252576491621
Merged-chr13-115148688-4	8.07485901240494	0	1.36116079324432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50299197-4	7.14011166664571	0	1.35441755687205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34180698-6	13.882638330607	0.76229384558961	0.549929341333765	1.38616689144243	0.165695948711519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09703810615165	3.93317059260143
Merged-chr11-106973571-2	9.58820869958359	0.67653799839033	0.667849110615548	1.01301025581478	0.311055262258792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46207180086097	3.88227566409395
Merged-chr3-97265173-3	3.39930568943817	0	1.44582453360926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141994768-1	1.67527604758318	0	1.52059186942807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67308480-1	7.64999460684502	-0.545179932552142	0.6426275968715	-0.84836059827844	0.396237178987878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44314240804869	3.25646943177052
Merged-chr7-29263832-1	2.41042263195402	0	1.47012982633372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57743526-4	5.99989973861401	0	1.35688378473314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12690891-1	3.78863122768338	-3.32615112483301	1.19571335545624	-2.78172950871146	0.00540700844622356	0.130747140626453	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97898450809916	0
Merged-chr10-18953910-1	2.94479088972991	0	1.42827292689782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145998266-1	3.71187335912736	0	1.379933395093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45607590-4	7.73276551498294	0.334871299243476	1.01463067607708	0.330042553550821	0.741367808823884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	1.44059547810395
Merged-chr2-165404846-1	2.1916917323015	0	1.40501857144501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38399625-1	2.88195621314023	0	1.39957378179324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116016556-3	4.2925317831984	0	1.38491108654181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-15878423-1	2.12632445038013	0	1.47731415930231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143036621-2	4.01043878666325	-0.572620606433967	1.24960764551511	-0.458240319262708	0.64677979584611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.600815099743027
Merged-chr3-15073578-1	1.39347694608906	0	1.54577825210507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-4836472-2	2.21627675682069	0	2.10577485676069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95170319-5	16.8564918967871	0.628617382381144	0.481897975667541	1.30446155435777	0.192076259607409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21399637462344	4.74328718388007
Merged-chr10-22002214-1	2.12776714536629	0	1.48008036080127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27596627-1	2.28803296792988	0	1.41437656542427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142683546-1	1.89122107960242	0	1.47700651901424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63942304-1	3.57124840299745	-1.80888553346392	1.19519333262576	-1.51346688781297	0.130161105878082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0.465515277017237
Merged-chr12-104142611-1	3.4151565411612	0	1.43136430862567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89386652-2	2.00137562329481	0	1.6250720522154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25855277-1	2.5590159785701	0	1.47661115989738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30256400-1	1.41257325093409	0	1.72833958925679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66685052-12	39.4031139359761	0.219854504626402	0.244624652651264	0.89874222505213	0.368789980234175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.82843303672965	6.04383202909263
Merged-chr6-136967539-8	29.4569454067146	-0.571456356151734	0.319679096157593	-1.78759375580198	0.0738415736314984	0.75706414580057	C57BL6J_F1_Control-BALBCJ_F1_Control	5.55651785399062	5.00722178692903
Merged-chr16-89718695-3	5.53948721925342	0	1.35731389969742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37692602-4	5.2706837648161	-0.270217650808589	0.919452956312585	-0.293889588318125	0.768842274293834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49176722630688	1.33245162145219
Merged-chr8-115611647-3	5.1815080597671	0	1.36270220444216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43806538-3	6.40067473822014	0	1.36341932236623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32259268-4	6.76912710702145	0	1.37108404688588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78448401-4	5.6558353982525	0	1.37407669429805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56758664-4	4.95968236629319	0	1.40290572154166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156684120-4	14.6453682240079	-1.7204633510835	0.514147063858314	-3.34624754670897	0.000819132315288602	0.0308146806413655	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91588910426009	2.72305936321973
Merged-chr1-131747498-2	7.61267468570742	1.51460220498525	1.26462424016839	1.19766975586644	0.231045607958911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.3834622398384
Merged-chr5-130454024-2	2.74458607929469	0	1.46985877105484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132564985-2	3.4320423484048	0	1.44429407256559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67899028-5	9.49668088292107	0.0545515519914202	0.833329398857335	0.0654621714609151	0.947806024505621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54084633208408	1.75107117680423
Merged-chr3-51511084-4	6.35538881345661	0	1.37151749866947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118480347-7	44.4943639036581	-1.15859794344267	0.455280228362707	-2.5448017973661	0.0109339780978007	0.213414763166373	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43313423361058	3.58834924913379
Merged-chr11-55449578-3	7.24148852359295	0	1.36574700950534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46889958-1	3.3078411401632	0	1.40025516592188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114830241-4	6.07840448724618	0	1.3647028036859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19669076-4	9.07785711141415	-0.29371758845744	0.729827843059102	-0.40244777073222	0.687354519156657	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27189710560821	1.59708520306594
Merged-chr13-55437406-2	4.07817255795152	-0.677017904821502	1.12717829440399	-0.600630714930049	0.548085975588082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.67591700901439
Merged-chr13-59975990-1	6.32958281802626	-0.392963135319533	0.696461270908096	-0.564228266142007	0.57259879334729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39184591427084	2.44720710929267
Merged-chr3-78958990-4	4.7268418784085	-0.339957740209117	0.976033551656055	-0.348305383183093	0.727610851474535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.18909650862134
Merged-chr11-119258669-5	18.7654956158775	0.668004737482026	0.400764599109083	1.66682571007277	0.0955490663731843	0.884432401982255	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16771004116152	4.90510172325685
Merged-chr15-101077782-4	6.31208184173545	0	1.38075559813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8837867-5	10.7704139619856	0.216060853306642	0.685804072649355	0.315047492313613	0.75272559486292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	2.47565436424304
Merged-chr17-62784110-2	4.36094965360037	0	1.3955623534825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80793947-1	3.01284946778571	0	1.42291131453288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100499085-4	8.77277226838462	0.019516663904913	0.751473891115976	0.0259711802840279	0.979280325496084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	2.12382511851675
Merged-chr11-54201449-3	3.21152203321883	0	1.45085117364298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-124072769-6	20.1748514097333	-0.115429865345525	0.425125158165701	-0.271519723376459	0.78599133221248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31047709495079	4.22655190009767
Merged-chr19-9995750-1	5.34713949373839	0.988678479471135	0.799907249735289	1.23599139750054	0.216461761324673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45024018534946	3.68809747156637
Merged-chr7-81235285-3	4.39899288387714	0	1.396551722126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166171418-2	4.20888446779099	0	1.46134054432006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19563330-1	6.02109860135851	0.069917060437391	0.867044764409715	0.0806383514523504	0.935729565455283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78862493009953	1.88810051069396
Merged-chr6-124316160-1	2.60281011105817	0	1.3967057026759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4918519-2	4.52914723231893	0	1.42198691146797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102290838-2	4.22530301776391	0	1.36288309306851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118104917-7	20.2334311640894	0.0776116593558118	0.528941894468328	0.146730028699701	0.883345115653011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84593468635383	3.96520056989233
Merged-chr5-123252030-3	5.66317188247587	0	1.39244132873811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154103784-2	4.12596652550296	0	1.4111078402379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177282181-2	4.47850629297668	0	1.36714293312175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44923053-3	4.39956846340454	0	1.37599776344526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80180184-4	6.46765809071464	0	1.35602095987859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5890590-2	3.73890793434681	0	1.3781883470484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30596397-2	4.26872979675141	0	1.37729902631536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16047153-2	9.10126245790853	-0.56238915445023	0.639234553957727	-0.879785285335844	0.378975637475674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85447654972834	2.37287130170512
Merged-chr7-133050854-3	5.52832355682491	0	1.36418684561514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160619502-2	4.13159665639748	0	1.42670938603512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5616842-2	3.92553980279903	0	1.42681604904718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55027757-2	3.4542649309379	0	1.43908833576924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60881476-2	3.31262298967395	0	1.42695420349881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5674687-2	2.20105806062954	0	1.71284012973993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36688501-2	2.19581269149361	0	1.66846914837732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81450326-3	5.40538955573149	0	1.41129403778284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21051126-2	4.11479726110823	0	1.41097699134063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85863192-1	2.49245332951535	0	1.43976823042635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120502215-2	4.25179889282171	0	1.3844071593543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72793864-1	2.70542332933642	0	1.40821228417528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53774217-2	3.3217492321475	0	1.46553069240104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90316062-4	5.31992468849313	0	1.40336242794319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25479930-5	13.4689457298011	0.681942013968985	0.497856862461491	1.36975517540794	0.170763338756917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88900786427689	3.65450680433737
Merged-chr2-27593459-3	5.29817762267112	0	1.35999503820792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157011147-1	4.45167120744517	0	1.38044866428581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55498147-4	6.93259491911175	0	1.39206261417619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138127529-2	5.11917716327505	0.306949134838367	1.23580729689962	0.248379448485568	0.803840833189987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.97908007631626
Merged-chr11-18864823-2	5.77037425509278	2.16550961490076	1.23522914188693	1.75312380631884	0.0795807579918552	0.791149296046803	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.338064021838
Merged-chr9-77725734-1	4.0494164082403	0.0132284720105945	1.00826528911191	0.0131200311599006	0.989532030018839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	0.88866493597531
Merged-chr12-85228602-1	3.33730003641311	0	1.38357731430977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125428617-3	5.73752076329165	0	1.36861787696688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34437511-4	10.3395215704034	1.50468797165984	0.789319124122033	1.90631130765204	0.0566098280359243	0.64243291068994	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	2.56996733395335
Merged-chr5-143511782-3	5.02850185086835	0	1.37541473185265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80949451-5	17.7510555927658	0.186182382148631	0.424070389974169	0.439036505614013	0.660635085004571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01126118305717	4.30889765049146
Merged-chr8-31121142-6	16.9385674810425	0.241176195920531	0.473876663042591	0.508942969193768	0.610792199913531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53525852541317	4.70322687361487
Merged-chr5-53547054-5	14.7494496803024	0.555520692024215	0.554718408799883	1.00144628916511	0.31661109473128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08299119290449	3.98796797329518
Merged-chr11-23211269-5	11.77944563865	-0.464178125390218	0.620156601468724	-0.748485341107229	0.454167463730227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78594721558773	2.51671763062528
Merged-chr17-65680308-4	7.19847834801287	0	1.3850664236196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149203633-4	8.41210336868757	1.7943705280464	1.27350337205334	1.40900335831325	0.15883417510478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr4-33251915-1	3.51484370959927	0	1.38385454578218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80191854-1	1.98882125696577	0	1.46590854544423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114500349-2	9.66908513624667	-1.53116646817783	0.702604589975322	-2.17927194046883	0.0293114724081875	0.417323815777021	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13160024164044	2.91718979592903
Merged-chr18-24223716-4	6.41751892494963	0	1.36040285382403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45608610-4	7.00200893603925	0	1.36315617335084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101762646-3	7.64287127176068	2.46939916312303	1.02101272106613	2.41857825291785	0.0155812937911524	0.274016030149872	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.28284312426037
Merged-chr1-133118346-6	27.2373657993211	0.869139928877539	0.450544492962637	1.92908789798395	0.0537199511319845	0.619597458854985	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86154170239012	4.55047152241263
Merged-chr9-22322483-1	4.66736425888135	0	1.37231650994199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80335278-3	5.02598196772597	0	1.39339530393138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183510952-8	22.2242048505981	-0.79177500353983	0.349729451593369	-2.26396432994848	0.0235763087474269	0.360812230693897	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23777187793732	4.50663049061225
Merged-chrX-74250581-3	7.09038761848726	0	1.35224826832567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52416678-4	12.1046064463551	-0.957097538695274	1.01642889153117	-0.941627640329547	0.346383313355775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.724326877898254
Merged-chr7-90069983-3	6.40019136469672	-0.883034546339671	0.851553580456993	-1.03696886092098	0.299750369564052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32821868412348	1.57877988104955
Merged-chr1-91956458-3	7.96544094806957	-1.83975228989462	1.26238654676984	-1.45736050071362	0.14501689436658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr12-55652970-2	5.00766451390408	0	1.39955663152738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33947663-12	34.5326753559397	0.108926056472599	0.339822378670825	0.320538208515433	0.748560370791283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57060308162425	5.90031806933149
Merged-chr4-102720166-4	8.18476567835693	0	1.3637087258682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48429293-3	5.43121063922449	0	1.36540388128692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21384036-6	13.9842789511729	-0.245604528570266	0.6974764184505	-0.352133093066997	0.724738451130011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61001478900548	2.0352295179067
Merged-chr11-106818546-4	6.33490871238334	0	1.3607981590644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116652381-1	5.30361149573176	1.38339231656293	1.13380836219718	1.22012887070446	0.222416025615384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.03321995648104
Merged-chr10-43021756-2	5.20560461236585	0	1.355617999277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58559797-2	3.96150321764864	0	1.42285846588617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41525464-4	6.16650345769093	0	1.36179737564567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70911214-4	6.45430732755209	0	1.35757931484241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41575367-4	12.2363415955205	0.186560977321078	0.622923074293826	0.29949280259456	0.764564062861448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27617804945878	2.56113887448425
Merged-chr1-176847281-2	10.1163387466887	0.765706690684438	0.626360372527685	1.2224698819857	0.221529986619778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09282686802642	3.01360340173802
Merged-chr1-191178884-4	5.69343819729083	0	1.36576306438037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155683905-4	10.228679234037	0	1.35685427233029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90822523-6	18.6075819464863	0.138148937207163	0.381710218295946	0.361920982424563	0.717411079656236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90095260791118	4.98683411422303
Merged-chr7-66119018-3	5.6662948492662	0	1.39887282146599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118843240-1	2.18347377583863	0	1.46821798734447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65396981-2	5.96231740968093	0.397624917987799	0.756124835058725	0.525872051216142	0.598977108948447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05529040810265	2.15035374797572
Merged-chr8-125829083-2	4.92621839140388	0	1.39448552686949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54921768-1	2.10133877604873	0	1.45172889246421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55429141-1	1.40357496522404	0	1.66793313455242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140534528-1	2.2573900644038	0	1.44135338790154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69629672-1	3.3927633760717	-0.687671903832752	1.44416187936394	-0.476173698848516	0.633950635458395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr18-65534184-1	5.26775479668274	-2.44908386048426	1.02395885968948	-2.39177954984144	0.0167669098723691	0.286613979167331	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45362829364608	0.878778741524029
Merged-chr4-130798535-1	1.57380961161623	0	1.5263126337127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118696313-1	2.24545256296809	0	1.5089623580577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85274348-2	2.32793755876025	0	1.51491222557452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29704723-1	2.18534115844803	0	1.49530528041241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32255125-1	3.45206936950062	0	1.40697574440293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43402338-1	6.94777660462338	0.544830625820289	0.765759432053719	0.711490584398141	0.476780283425868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5707100905608	2.95094920113884
Merged-chr1-136600855-2	3.08119171661924	0	1.45872611621967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-60387110-1	2.6389427133511	-0.0354134735730479	1.39851782652613	-0.0253221467051398	0.979798009077502	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	0.790093605168944
Merged-chrX-71274386-2	4.43581379480911	0	1.3828844071573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38672461-1	3.23753466210049	0	1.40094810961943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89680734-3	6.86011595691861	0	1.36916573160426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132237777-1	2.55231144283602	0	1.42775768278793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111049942-2	5.03211193310142	0	1.38244950377897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63079973-1	7.95661641946579	0	1.34918065686072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75727613-2	7.44699545901447	0	1.36459182256195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106887961-4	6.07993880172466	0	1.35365665404228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62722258-4	6.99753489234014	0	1.35251326573431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99182816-5	13.3744888300973	0.811545744002146	0.50276544750642	1.61416371794679	0.106491919507898	0.949041882810952	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27894720463983	5.00655271666376
Merged-chr14-64050634-2	5.3861741185357	0	1.36949667004809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127331731-3	8.71868699166229	3.80356837378011	0.820086256497539	4.63801014057297	3.51779531023854e-06	0.000374948696606386	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	4.68253659626786
Merged-chr10-84109877-3	6.31200256271341	0	1.35505478752386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57347939-4	7.7631381099686	0	1.34814245382624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33563332-3	9.12286905827579	0.820807775530014	0.58715728834651	1.39793508795826	0.162132560766697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83031286297958	3.69052173003133
Merged-chr10-119129708-2	6.14929062654531	2.03581533252227	0.86325869890131	2.35829113000924	0.0183592882751428	0.303109105734537	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	3.3681657229973
Merged-chr9-15126187-1	2.14838985047482	0	1.4174762685981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83397488-1	3.15105884433047	0	1.40554833943974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27680705-2	3.64823761936635	0	1.39761737500992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90670298-6	16.7415171974509	-0.230996296860592	0.499284837332916	-0.462654339944571	0.643612151733904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51437717062498	3.83255664370413
Merged-chr6-116133939-2	5.05535047062768	0	1.36902063583164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-7420055-5	13.3202736461279	0.742752517681236	0.56239090999674	1.3207050549333	0.186599727942751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49991195549289	3.57573173402021
Merged-chr11-63955187-1	4.79005215098745	-4.83794221411405	1.2983881793318	-3.72611387805751	0.000194454578548555	0.0101442960031871	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57694184525732	0
Merged-chr6-121077418-6	27.140508802053	-1.00276295700991	0.393993480018981	-2.54512576442026	0.0109238386841188	0.213293443617103	C57BL6J_F1_Control-BALBCJ_F1_Control	6.10316564248154	5.17167711682923
Merged-chr8-94794990-1	5.1025039743087	0.414291621067257	0.831654618875211	0.498153454167758	0.618375886645081	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95040317292908	1.83515507879139
Merged-chr10-99332816-3	6.37794366330159	0	1.37163562053164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50532141-4	4.86192009083795	0	1.37406679672048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94904791-3	4.48868798728137	0	1.38281535461881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84562412-3	4.94810752303679	1.05153882309713	1.29595210202139	0.811402536758082	0.417134542833283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.577068348605183
Merged-chr19-4629003-6	24.4265623349385	-0.00110849217512361	0.437670599079211	-0.00253270879390963	0.99797919291678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56937777545426	4.30649932142411
Merged-chr3-54102396-3	6.44163530190654	0	1.37932008272757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19764071-2	5.0768677163674	0	1.39143147643629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32077380-3	5.68674750365476	0	1.37610047014395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-20454862-1	2.41148248468359	0	1.46565526230173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4601751-3	8.33909059258056	0	1.34942150132215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68935260-1	1.87175556398385	0	1.72258338845666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62556381-1	4.09952333066791	0	1.37955193233017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43391891-2	7.29284381866221	0	1.36864109841577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56742225-2	2.96421797896317	0	1.42980828123372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85762573-4	10.6003797587478	1.01088127716491	0.710623899302515	1.42252642805442	0.154873484992998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8133278414847	3.22296663573086
Merged-chr17-65786464-7	21.1088434820878	-0.871655108404896	0.48333344389531	-1.80342394968575	0.0713216591407646	0.74030438595242	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98822287600513	3.15215787513841
Merged-chr18-9503766-4	16.1683760068013	1.5176628567871	1.05472564510387	1.43891718555648	0.150173987758335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.38572824442771
Merged-chr15-62210778-4	5.66042573843164	0	1.36780901530027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19813721-4	6.58835818040112	0	1.38757546674812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115556329-2	9.58141367007924	-0.16418023803835	0.754572936658551	-0.21758034255162	0.827756101932895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69348176078283	2.66815054791146
Merged-chr14-48459576-7	17.114478714456	-0.412490023788036	0.401778874224087	-1.02665931498921	0.304580913285618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79292574857648	4.32942038837913
Merged-chr5-64718305-5	11.633276859815	-0.0342078466496832	0.580247578055333	-0.0589538809697902	0.952988841834898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83660406472211	3.42790656337971
Merged-chr14-67211900-4	5.54143534514534	0	1.36967468148889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146913193-4	12.7275119756546	-0.0366805357476492	0.516883158329678	-0.0709648499018294	0.943425730647571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89848356687922	3.40693222745632
Merged-chrX-155606212-1	1.84829390491839	-2.16616827763091	1.32918086662822	-1.62970166966509	0.103164564327503	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr11-79121693-4	5.90352483266456	0	1.35569885804777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124275646-1	3.09922497449064	0	1.48835982256784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53857803-4	9.51035835375301	-0.158754497650159	0.61543766583038	-0.257953821263051	0.796442546634915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91052104168672	3.1515729860549
Merged-chr8-26685265-2	7.97721143053377	1.18468030913887	0.66377772506327	1.7847545411771	0.0743011398728716	0.759483953055552	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58467461800438	4.13689327323937
Merged-chr7-129330649-1	3.60096880348551	0	1.43775604700948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5610171-1	1.90784201568365	0	1.43166259522138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12154300-4	5.72070935788839	0	1.36433786946943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32996022-2	5.5762808651587	0.00136137413654744	0.941437560604546	0.00144605887157639	0.998846212354469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73830414206781	1.35418021299255
Merged-chr5-62933802-3	8.40606036963251	-0.292488733319845	0.890001100599321	-0.328638619798205	0.74242885362368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	1.28129123231014
Merged-chr5-100628191-6	15.4774551304909	2.62903896710915	0.733083847011904	3.58627321802994	0.000335437514431638	0.0159667669413217	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48219169541115	3.85792334426309
Merged-chr7-98535419-5	9.91232283692771	-1.56626489867699	0.904105595381225	-1.73239155545382	0.0832038704980673	0.813760200864419	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19193974227778	1.02186287315087
Merged-chr4-137883882-8	22.7527663248952	1.09859839397513	0.391118436483917	2.8088637392073	0.00497166842717821	0.122564691840735	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96169358491227	5.29349151652316
Merged-chr6-5589832-3	6.13461534016931	0	1.38587049014426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114297812-4	4.70293376574988	0	1.38108573681152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135669539-2	3.28119580072281	0	1.38906749974375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33242740-2	6.08549376314209	0	1.38521027113915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65928822-2	6.64602858255235	0.401675861348301	0.828127038968995	0.485041355307492	0.627647010351172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37097709484259	2.45914805170659
Merged-chr5-147532115-2	6.21549032649193	-0.215970899204817	1.02118376567531	-0.211490729155879	0.832504365674537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84001395625789	0.948471875794396
Merged-chr18-74882576-4	6.12313852024629	0	1.38203656341932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5320977-4	7.41278756952374	0	1.38101402144407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50097127-4	24.632980358919	0.265647860281202	0.430705337713367	0.616774014669837	0.537383793925132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.49316389572311	5.74355278585231
Merged-chr12-110771075-2	3.73399121926606	0	1.39664499936067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51955222-3	3.9391055607175	0	1.40619585335102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36674605-3	5.30648134115831	0	1.39288397692952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13440860-1	1.8287206706458	0	1.50664453845499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25522081-3	5.27724433350731	0	1.37500225247084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55189867-1	5.22792817705116	0	1.37304635075383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9637854-3	4.2667821829311	0	1.40593293528802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141669340-4	19.2935394613559	0.276108721931399	0.411260945361857	0.671371121049335	0.50198413741737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.33441205820665	5.62659593887024
Merged-chr2-27690916-1	5.1045804294013	0	1.39609591884797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26689359-6	9.53595769150506	0.710490031821809	0.698031807365567	1.01784764580179	0.308750365196529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99906049126725	2.68048533520524
Merged-chr4-19537573-6	15.7710894037232	0.561118963682043	0.424383958131899	1.32219645189238	0.18610274227617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49234290144955	4.15065463254111
Merged-chr4-133205103-5	11.4997862854277	0.0726982649796555	0.534863749229806	0.135919222576478	0.891885139078697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39339490832717	3.02363814800153
Merged-chr9-25175383-2	3.83195634477719	0	1.38371489255509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57335444-4	6.66860049081108	0	1.36138355939617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62043377-2	4.65526657037182	0	1.38428977692079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11475537-4	4.73204792547267	0	1.3724451660184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110907998-2	5.06151785329271	0	1.36447594615855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102395153-4	7.45742055193686	0	1.3695982011069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154916868-3	13.6090166401372	1.8976103488528	0.6618359322916	2.86719148397149	0.0041413236097426	0.10807403269419	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15559996822205	4.75324738228315
Merged-chr11-94404818-2	5.01251099409521	0	1.37270121357635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70821689-5	13.4803590108683	1.09190291284866	0.488850566672421	2.23361286104501	0.0255085569582364	0.380185098996287	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03059019966468	4.79108592663556
Merged-chr11-46849346-3	8.88516142075685	-2.57629783881112	0.714204129624888	-3.60722898671034	0.000309484518810981	0.0149673211370517	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42770398357723	1.76271631669283
Merged-chr9-111145697-3	6.9578413309623	0	1.36011844796564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90540918-2	7.85990515416351	0.412185117464468	0.738488673047842	0.55814683759918	0.576744119550812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62758400369243	3.35235380909101
Merged-chr13-112439653-2	4.71933693187186	0	1.36368604680323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113009318-2	7.4242679029145	0.468780602991288	0.743313257941674	0.630663583600539	0.528260514845067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68492866054983	2.71112686564098
Merged-chr5-139288037-2	4.35343861794624	0	1.38184413446703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93567266-7	15.7233073334732	-0.317563070956135	0.47752907734619	-0.665013055793279	0.506042142555422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02053357894545	3.76629424059554
Merged-chr6-129097604-4	7.07643344684451	0	1.38073616101588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-18924630-5	20.0732573606483	1.78031661540797	0.39379350585913	4.52093949981194	6.15657831696496e-06	0.00059128169740618	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78940645076903	5.60352887264978
Merged-chr15-64047794-4	4.69642711661351	0	1.37330971070892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56626701-6	16.3809731124041	0.258307623672094	0.491275003051192	0.525790284601918	0.599033925544087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23470236370212	4.52076692508546
Merged-chr16-85147588-2	6.88873899850049	3.54548813345011	1.15908446293159	3.05886951886384	0.00222173893801038	0.0675455855320504	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.58934039553399
Merged-chr16-78264819-1	3.19020913738847	0	1.41486483261666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79160407-1	1.84480729498283	0	1.5259351106603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-3010342-1	2.53721223420025	0	1.47226927298462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85532366-2	7.02770445198438	0	1.3535167087119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36557531-1	4.67147220123572	-0.504958071591541	0.869232426953249	-0.580924107216608	0.561291604024107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30526401943093	2.18893016279325
Merged-chr15-38620428-1	3.00630753548632	0	1.41157709037296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104901655-1	2.17862499590688	0	1.45433529862593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57108528-1	2.95007355392582	0	1.41749452629363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54916048-1	2.36533589290528	0	1.503812533087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32010028-1	2.44798209073216	0	1.45846037671744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93376945-1	4.49220055393926	-3.14052229047488	1.0302715003152	-3.04824727221327	0.00230180436723759	0.069474616101426	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17736688716182	0.716426531808663
Merged-chr4-3954194-1	4.13723814595159	0	1.37731627695736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37184337-1	1.99133053185283	0	1.53336782281021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81335504-1	4.82437074039728	1.96571817688747	0.953395922673628	2.06180677946993	0.0392261353741106	0.501099718599771	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38601560292234	3.43524750910535
Merged-chr7-127077090-4	9.89938835607781	0.452244453326913	0.738819764123214	0.612117427399373	0.540460067995796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63379099656069	2.40089009312056
Merged-chr1-54832815-1	3.53881978754736	0	1.45155043129595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33452321-3	4.82427279527482	0	1.50277539665237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36632655-2	7.30389942197961	1.52277852246243	0.67548696003185	2.25434184901308	0.0241746705204559	0.365954990004175	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88869655420165	4.37439780065315
Merged-chr10-98508623-1	1.25624687650181	0	1.83230378012328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172463845-1	4.52698925290466	4.03646402642916	1.15311751314335	3.50047933573215	0.00046442224349852	0.0203592973664	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.38740722232159
Merged-chrX-19175964-1	1.35512809300536	0	2.45247438866349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173812034-1	2.32543028811788	0	1.42401306744756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125580691-1	3.07362085036385	-0.272423419914089	1.08128203485251	-0.251944831351284	0.801083706600848	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.02748994520012
Merged-chr1-133101627-1	2.88383119970765	1.20868794242755	1.39601502234535	0.865812991322196	0.386592723700671	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr14-73227329-1	1.52983067308445	0	1.60986888790174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21941710-1	3.16474689851352	0	1.41589414650623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11571352-1	1.19381360026314	0	1.69420885052217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86099504-1	1.97397696100002	0	1.44611506817472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25547444-1	2.39084548046782	0	1.47502183510295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36653948-1	2.40046598966397	0	1.52614759148343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4907941-2	2.25727085675357	0	1.64710428147743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93841540-1	1.59411607643789	0	1.51341964320778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86785010-4	9.09316142379681	0	1.35442519794218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70730180-10	31.0817545522598	-0.761791796164388	0.354576667518604	-2.14845438504331	0.0316776763667473	0.438382589007132	C57BL6J_F1_Control-BALBCJ_F1_Control	5.64073867639922	4.70134829004723
Merged-chr11-69754840-2	5.50840401228059	-0.591126145857803	1.26018507208398	-0.469078835285879	0.639013286688879	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.465515277017237
Merged-chr2-122166298-2	9.70185946815583	1.42309047612152	0.591902998530068	2.40426299521311	0.0162051102984036	0.280079487528795	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0723749503409	4.53613266227701
Merged-chr19-47436202-2	8.18034020027238	1.49945354555346	0.677625746445431	2.21280486082329	0.0269111020254734	0.394682956117928	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81853816206348	4.21571577829939
Merged-chr3-87498309-4	13.7024744199556	0.766335083834572	0.550095770933407	1.39309393805055	0.163591385991567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54938682242432	3.76677105145944
Merged-chr4-132946144-4	10.4159331160944	0.479679941610605	0.615446561122427	0.779401449145777	0.435743270459325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60007272653574	2.99266433573082
Merged-chr13-100403141-3	11.6553014729065	3.2689946207183	0.870967199408897	3.75329245801321	0.000174527036174092	0.00929198350576639	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.9082630963248
Merged-chr2-158310930-4	15.1272740070669	4.50482042995329	0.76425409575344	5.8944014235373	3.76042001662647e-09	9.59683904618772e-07	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	5.48057959444447
Merged-chr16-91441643-3	4.33034114331778	0	1.3704304695114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155206756-3	11.1873833521481	1.24521622016005	0.724410537297977	1.71893719934646	0.0856258077121163	0.825689923646582	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69757189012738	2.93121731748374
Merged-chr13-101797167-4	7.13904377902607	0	1.36304998950722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85486959-4	6.67015893008524	0	1.35042586223743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-5080184-4	9.24751896507314	0	1.35221034484509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121135848-2	3.0495949522481	0	1.48836079683598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85811403-2	4.58186866762299	0	1.42490413858104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97719208-4	12.385042920374	0.749803512134515	0.546713259279046	1.3714748991515	0.170226963024874	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00825230431687	3.60492356409833
Merged-chr18-50034150-1	3.23112838128662	0	1.5258292879017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141659649-9	23.7589743688401	-0.129330634810445	0.410627058960292	-0.314958870800942	0.752792882046386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70216984428082	4.60774502624521
Merged-chr17-25678256-4	15.0051054834826	0.42940891293619	0.399947339084283	1.07366363261564	0.282973466588243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04525678076987	4.52642905613845
Merged-chr6-116712272-4	6.68457238813556	0	1.39369481725578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98717661-1	2.56081485541691	0	1.45855574662594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90360150-4	9.96303619347596	2.10519688535661	0.588651419322326	3.57630478115585	0.000348485336492492	0.0163869501785427	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69469308021391	4.52005272126271
Merged-chr6-85154929-1	3.83039815944526	0	1.37230357346332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-49063032-3	4.82038617580846	0	1.38395025058095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7137124-2	5.56196776534018	0	1.37632845171572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64656929-2	7.39540541005181	1.73214798951198	0.80631958651707	2.14821519714542	0.0316966639811932	0.438422126553099	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	3.40229626003495
Merged-chr7-75709458-4	7.5811125351411	0	1.38716859229013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73971229-1	2.8169458655151	0	1.42484053939808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98103475-1	1.95535877713868	0	1.44979187481345	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19614531-3	8.68366395129915	-0.121059421129236	0.747342968003418	-0.161986432350671	0.871316538176256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75520908275751	2.57808039585857
Merged-chr4-132007404-3	7.81959906108567	0	1.36264665884627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17733874-1	3.64340309612042	0	1.40723306090628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17591444-3	6.70214889924109	2.00153399501679	1.00428869514568	1.99298668270526	0.0462629053675134	0.559965547288502	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.52747797030835
Merged-chr18-11866341-1	2.56506527352074	0	1.41904504687656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144173950-3	3.62182703432235	0	1.38239538972991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99339349-2	7.81972348229949	0.82337714615782	0.777026145030626	1.05965179089999	0.289303042555641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71702628909212	2.2739176407419
Merged-chr10-80087670-2	5.19450755133883	0	1.36949322073606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31004392-2	5.76205649176889	-0.055811548321169	1.16008520557099	-0.0481098699070976	0.961628680267183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.969611060640422
Merged-chr8-46340973-4	8.43635001355407	0	1.39768002769642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-165015604-2	9.95518542911612	-5.91358492247132	1.05207896768114	-5.62085651755335	1.90013036917246e-08	4.05055634266062e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55633904700776	0
Merged-chr8-128552153-5	19.9181975495583	-1.82865852119664	0.524962061460813	-3.48341081278908	0.000495068042909733	0.0212906675194068	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53060084317467	2.4951856459046
Merged-chr12-111843148-2	6.75252221854626	0	1.35983261351102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110680888-4	6.24149551973149	0	1.47036670858451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68916342-3	5.12745944149256	0	1.38908629565628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81843162-6	14.4206423892636	-0.508060844361997	0.449052589147282	-1.13140611287147	0.257884199803733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56581751637153	3.68902540448672
Merged-chr1-180971936-1	2.08064774047581	0	1.43904839705385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33292958-1	2.4020619360905	0	1.40689574084873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33879681-1	2.39801988669889	0	1.45323672690047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45030314-2	2.98692541380062	0	1.54474090635959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17899492-3	11.0429826599079	0.253424629462359	0.557556518379581	0.454527247208739	0.649449385290976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59017879480329	3.84627546683619
Merged-chr9-78022396-6	14.87962263462	0.275774022697528	0.625087579319573	0.441176615599555	0.65908514096936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35686799001988	2.32865955880796
Merged-chr2-59642857-1	1.92990372742239	0	1.45403094870009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80040743-1	2.59087116218206	-1.7794113336371	1.37050884439026	-1.2983581542874	0.194164291458047	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69225642490999	0.679405493272835
Merged-chr4-59244483-4	17.5073330228512	0.587573500970797	0.498242737789218	1.17929165125006	0.238282061545452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05299228708348	3.86072714829613
Merged-chr18-9506427-2	3.73638857371013	0	1.40500185212682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142778879-3	5.52843236743033	-3.57206300979567	1.13727300753143	-3.14090195242495	0.00168428408491369	0.0541751470839192	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	0
Merged-chr12-25282726-3	4.55622194674117	0	1.36469350811085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47242586-3	5.53262796130608	0	1.37544146656461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32217058-7	23.1659564577438	0.645178975800742	0.318742837235525	2.02413638968774	0.0429561203315956	0.531539208992762	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8578139151856	5.50292309672779
Merged-chr13-64307516-4	12.9644494235918	-0.0313248994763929	0.645591644300288	-0.0485212281679137	0.961300846733661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43640320282345	2.42345445095442
Merged-chr8-124746041-2	11.8638956280702	-3.10274564139252	0.820981750986394	-3.77931133994712	0.000157262692606871	0.00851458436993714	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10336697414027	0.956353103033036
Merged-chr8-124007755-4	8.82855964034725	-0.21517337936113	0.687157843310135	-0.313135302836113	0.754177869025593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79061537002619	3.66020431502167
Merged-chr12-84189261-4	7.78921984563791	0	1.363347470206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94962000-1	3.27228331609729	0	1.4602995904758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-159916865-1	2.48598666037899	0.49337819735661	1.48906740835833	0.331333688849286	0.740392447047004	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.879366456215217
Merged-chr5-4877390-1	2.38615783179797	0	1.53177067607712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26069938-1	4.34921831617375	-2.9641875361812	1.26970727178209	-2.33454403393377	0.0195672531584936	0.315450082012362	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71491581301229	0.303163067301871
Merged-chr18-62177151-10	40.4113284104294	0.279163607027019	0.339610571419422	0.822010945831981	0.411070667250599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89440758204156	5.25998732152538
Merged-chr18-57621463-4	5.57363729189148	0	1.36989316861917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75633099-2	7.31398179851693	-0.984754792588749	0.617047326632677	-1.59591452727412	0.110507877643049	0.967638163788419	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42684806903154	2.02219872975713
Merged-chr9-68957228-4	8.19235637938941	0	1.34832102863054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128393014-7	16.8815331174139	-0.0375593803635542	0.460263423382848	-0.0816040955144773	0.934961544410088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8664844837871	3.83050092095069
Merged-chr9-47616621-1	3.03474324687747	0	1.40575890588284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30944271-2	5.45936481368044	0	1.36608027573191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105795115-2	4.08809756548943	0	1.39768918336401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103680541-3	5.58096199720137	0	1.36679127242097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121923632-3	8.09032793886451	-0.341055161454753	0.618432334093888	-0.551483392204029	0.581302348402242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95647207835154	3.60177687675403
Merged-chr16-91352200-5	15.0689295294967	-0.674016033448661	0.508816244797482	-1.32467475309663	0.185279050378946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91812430948303	4.27769446777234
Merged-chr13-37965541-7	29.7879243719876	-1.56544203842357	0.35628837746976	-4.3937499436294	1.11411960810836e-05	0.000961308377415273	C57BL6J_F1_Control-BALBCJ_F1_Control	5.52361014275085	3.95675660959508
Merged-chr2-51304889-3	7.18736807399972	0	1.36364597765157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98882676-2	4.33332015699728	0	1.42427299500628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108723474-4	11.205955797723	-1.21453611014102	0.649468224143106	-1.87004700921813	0.0614772901344806	0.677233162629128	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44657666009352	2.55508835029063
Merged-chr7-38124309-4	12.8005060055912	-2.54178678527027	0.615141376116687	-4.13203677066281	3.59562882082067e-05	0.00251227232739063	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69197312385908	2.11005512232597
Merged-chr5-24780378-2	3.68262852567259	0	1.3947371244991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75203036-2	4.48329183039511	0	1.38400940486081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77848563-6	20.2448401492234	-0.134786376667254	0.363142493861415	-0.371166632783802	0.710513424011804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80786740261806	4.55731642565796
Merged-chr9-89228334-7	15.610571373422	1.26610562380206	0.463605195292687	2.73099964508104	0.00631425396433102	0.144764458560553	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05989870747768	4.50915832703244
Merged-chr12-84389140-3	6.80998844401599	0	1.35562400846056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13239780-3	4.62141565775	0	1.48063935959753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132101022-2	4.26161882354268	0	1.38048225273663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97814701-3	4.85686649780192	0	1.37065057202203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12010615-5	11.2479662674049	0	1.34284589837335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122892640-3	4.12798413576237	0	1.3614170319488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31088473-7	15.3860867677463	0	1.35801924037009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24745730-6	11.1731866138538	1.13920807003332	0.706095891304227	1.61339002827094	0.106659798199852	0.949078404050706	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17564474993106	2.45914805170659
Merged-chr4-8432638-2	8.03098523339052	-0.202658617809763	0.700798048981234	-0.28918262273186	0.772441629080481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98191404061908	2.29457836240096
Merged-chr2-52084297-1	2.92577573492484	0	1.4165057932062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-53357512-1	2.80732512702895	0	1.43151168688467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88673776-2	2.89078373386909	0	1.40867229542625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111583307-2	3.51107255198086	0	1.41270159356813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79874161-1	3.27823629949048	-0.81563592836476	0.98110730671815	-0.83134222197682	0.405780328945349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19546283737452	1.38572824442771
Merged-chr1-77438801-2	2.72275473951611	0	1.44705049326926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58978825-1	2.87828785841029	0	1.46503025622431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80894718-1	2.78869445903945	0.833973167324236	1.26084630096876	0.661439198959827	0.508330694455244	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.23107802440432
Merged-chr12-24780683-2	7.1619552019438	0.0136600076564035	0.755469025883563	0.0180814926732799	0.985573842246246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82849232429759	3.67506325903735
Merged-chr10-94065999-1	1.3740250571453	-0.659491654901417	1.6656100905575	-0.395946001192078	0.692144864313324	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr1-120518805-2	5.82362146391135	1.61406889227636	0.883767716980557	1.82634968585514	0.0677976055060257	0.71887353599947	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01913900782325	3.1507924731524
Merged-chr6-31455653-1	1.39155186641202	0	1.50587623911081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73513421-1	2.4455953856022	0	1.49425880872038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59823252-2	3.47056504523352	0	1.41883564839682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121339384-1	3.67568378369058	-1.1942833051649	0.936943046350579	-1.27465944682195	0.202429806448837	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25610425458292	1.38647389072186
Merged-chr12-103345199-3	6.08856917224106	0	1.36283262102883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142054753-1	2.61679826323789	0	1.40350099137245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19778114-1	3.02714896869767	0	1.38473005539545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11691044-2	5.85001734893656	0	1.36818236043775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117942086-1	2.41654858906862	0	1.44233215566564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84854640-1	1.51865610600586	-0.671376604888117	1.57857091303434	-0.425306585434032	0.670613193507696	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr16-43109505-4	5.76035534312184	0	1.3581907165722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164414778-6	19.5699130452084	-2.08255589342398	0.443639561914793	-4.69425198337916	2.67584033461483e-06	0.000293258074091386	C57BL6J_F1_Control-BALBCJ_F1_Control	5.46649016921209	3.49981465118978
Merged-chr2-170247834-3	4.94524335769749	0	1.35768677876029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122852181-1	1.96537314387601	0	1.60372415499899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20131670-1	1.54237280903352	0	1.49031210027052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116913720-4	5.69334348666311	0	1.38103029126737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93298334-2	2.94376623626028	0	1.41322551269542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64006175-2	2.30409409322221	0	1.68913499782717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84250281-1	1.99262103845174	-1.75759325428452	1.30186128262104	-1.35006185201694	0.176996143638558	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	0.465515277017237
Merged-chr5-24265845-1	6.95006558439859	-0.0782940618083152	0.801648304533509	-0.0976663474063925	0.922197238642526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43325798495756	2.86388403432616
Merged-chr18-36511173-1	4.58840684515854	0.12557770594755	0.932331643076898	0.134692098975764	0.892855320366385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	1.86501351763573
Merged-chr11-68447372-1	2.57216497685005	0	1.38635115313302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125651503-1	1.93999021104039	0	1.4656559683351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84285140-2	4.43557576658499	0	1.3969096873943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-157585811-2	3.81507259317232	0	1.41856537218141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21385223-1	2.77915242932076	0	1.42135045109404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106711653-3	5.89234253133405	0	1.39012824208844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134092194-1	6.73988461538545	1.96794501940382	0.87643304763307	2.24540257207157	0.0247423004511279	0.37143515885746	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.78050363850636
Merged-chr6-99188603-3	10.8428189967044	0	1.38678037741366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31061909-1	3.61914386470673	0	1.36887867113252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31821833-2	3.14745472872151	0	1.46897819932045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11559294-1	3.38401403709299	-0.681262907757053	1.49934488482937	-0.454373716581282	0.649559866571641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr5-123900764-1	4.06501784370511	3.0900971021464	1.14554829809261	2.69748303698025	0.0069865844177673	0.156032761859249	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.60808300158596
Merged-chr2-11280063-5	13.8778846441293	0	1.35522273040718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55808857-7	19.3829798802212	0.955110778928578	0.425232611389701	2.24609014771276	0.0246982342877519	0.370978534857117	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85008038332742	4.86548503105762
Merged-chr8-71309632-3	13.6410476182304	-0.200560493968985	0.501820772879046	-0.399665587413469	0.689402841589538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11695961502112	4.04148164925115
Merged-chr11-77604528-4	6.10053978912206	0	1.36676886272159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181856005-3	4.73897313921852	0	1.36709426946924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6371543-2	9.11224013459904	0	1.37308481667403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79532903-3	6.63212736878602	0	1.35523449408593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36822646-2	4.6061989661096	0	1.38438698644438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155533613-4	11.4269325987662	-2.39945459363385	0.567976794078065	-4.22456448687947	2.39403294217103e-05	0.00181553673131226	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91157916788833	2.02099185162662
Merged-chr2-32665565-2	5.01856182927372	0	1.37963047412899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142342774-2	11.5296354765583	1.09321389688488	0.504596022349076	2.16651310843787	0.0302719992684493	0.425868428631893	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30457403055127	4.32423906020071
Merged-chr3-87518594-3	10.2085994533083	-1.50694795736005	1.20686126939501	-1.24865052477446	0.211792924023201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.303163067301871
Merged-chr16-3703092-2	4.30935885139444	0	1.4038340551194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72107155-3	5.17776634145451	0	1.37512226898357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154402187-5	8.80633627619523	-0.660466462007409	0.771507713583675	-0.856072402619961	0.391957732510252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	1.38572824442771
Merged-chr4-135709349-3	6.72970081613073	0	1.36023870925276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56477297-1	3.96217686875778	0.640953963483867	1.18675186730258	0.540090966901714	0.58913429992178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.30064958020929
Merged-chr6-81448568-3	8.35916548659121	-0.0360173750399577	1.36738198444648	-0.0263403902125692	0.978985839345992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.303163067301871
Merged-chr7-12903886-1	2.7061849899339	0	1.42285595346612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58700100-2	3.35424173209673	0	1.40911705922594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61004360-1	3.79483720681648	-4.13053967424647	1.2223218885074	-3.37925689876204	0.0007268205582233	0.028220884803186	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8254465302512	0
Merged-chr5-43841584-6	21.3191992122182	-0.0338634237636989	0.524576233100207	-0.0645538658195941	0.948529217790125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57258995054397	2.67015429457203
Merged-chr19-24265171-8	19.8120452311233	0.434772103292121	0.478325900470222	0.908945350575235	0.363378973549371	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07623362038649	4.94817498913488
Merged-chr8-120576008-4	7.38567493085808	0	1.35991015044067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67394099-5	11.0169531756088	-0.0371127402386099	0.889784498313857	-0.0417098076095264	0.96673003542475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.39949824061849
Merged-chr13-56354086-5	11.1012358943002	-0.744608477365776	0.720994791788807	-1.032751534194	0.301720189894901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88029652315314	2.81859059829052
Merged-chr18-46335055-3	6.56968500276618	0	1.3540900888542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113638210-1	3.16595011021573	0	1.41573910998496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106704866-3	3.50220743921128	0	1.40486767659612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59175439-4	5.88814242208756	0	1.36781840762281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47104198-1	3.42058090636365	0	1.40733816309543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131868770-3	6.03509726796478	-2.70616273623795	1.20553474582614	-2.24478203188034	0.0247821288168437	0.371930353493873	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0
Merged-chr10-8898475-1	2.53406469985575	0	1.42817715522372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154943831-7	19.5127925737466	-0.91345131571271	0.420078036235425	-2.17448006541523	0.0296691009030879	0.420214344968982	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90773139833454	3.98858241461469
Merged-chr8-117264770-4	5.72937082940984	0	1.37394980629976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116160272-4	14.573111544905	1.13703488381368	0.482841443902517	2.35488253581489	0.0185285617034958	0.304564283532001	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47895994633412	4.47723102614148
Merged-chr16-92412598-4	7.68726826956295	0	1.35262163945408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34667388-4	9.11128937406191	0	1.34741912273292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38307890-4	8.25188095223587	0	1.34804212337764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58798230-4	5.97842739236744	0	1.35361956514839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52133017-4	4.62793786693782	0	1.36356962102604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173737051-8	44.1418514558799	0.962591525733624	0.554534119995666	1.73585626388715	0.0825892527380748	0.809788814860932	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	2.65188130986761
Merged-chr2-152696945-6	15.8806106934792	0.93844423754912	0.401922792380803	2.3348868373207	0.019549333154089	0.315335964665616	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81695250779713	4.81734437240174
Merged-chr2-71938996-5	14.1211493821539	1.36982291685478	0.741918863461974	1.8463244221381	0.0648451137316308	0.699462321101027	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2972429702454	1.96765313769702
Merged-chr8-116636094-4	7.10572724696629	0	1.38904451545174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115543112-8	31.6153275317728	0.195349410604067	0.391370871802979	0.499141414648784	0.617679763426494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17368306741641	5.40608397123681
Merged-chr5-34773587-4	6.93528607659358	0	1.34904812839339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82647355-5	16.0637268624515	0.0139055631708372	0.507633798312297	0.0273929025550864	0.978146359066695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40029164523581	4.47613324577981
Merged-chr17-33771120-4	6.99556269018219	1.2620332564411	1.31571948943884	0.959196292653052	0.33745986778835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.790093605168944
Merged-chr7-67440785-4	10.6598424054308	0.890059513792562	0.70486548070814	1.26273670388621	0.206683818722383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83529069928191	3.70163532182665
Merged-chrX-159645473-2	2.7118605039923	0	1.46592973682444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75993776-2	8.50451888197754	-0.694922412478247	0.839876547582346	-0.827410188412379	0.408004607771231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27589464621145	1.56163052678955
Merged-chr10-67715805-1	3.22797440340241	0	1.39468659617016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93005663-4	4.16414643073063	0	1.37413681136699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61367855-2	4.21819496448701	0	1.44025458215414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104289747-2	4.6398040946237	0	1.36466031330515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67308440-3	6.42251660720252	-0.0350202533753687	1.01940978384599	-0.0343534601396954	0.972595294974173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.97908007631626
Merged-chr4-139232240-2	5.94899101367942	-0.0387520726240785	1.20553120281282	-0.0321452257176421	0.974356237122173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr3-10292802-2	6.03005152603086	0	1.37224477178899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20743091-5	8.02554621060079	0	1.36708560623266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35423238-5	23.6628713719536	4.60901026139802	0.860742301146889	5.3546924035879	8.57020835329434e-08	1.50415245649992e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	5.27999983448333
Merged-chr10-41930173-3	6.03620082618318	0	1.39654747470463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5631170-3	8.6740545091821	-1.39158534763731	0.536330032565866	-2.59464371402028	0.00946890180044493	0.193431053352268	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24250325402666	2.45989369800074
Merged-chr10-70251406-4	6.92116500776211	0	1.37442898636186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173490572-2	13.7855045147313	0.97654842553447	0.876646437028324	1.11395927056385	0.265296660134338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57167815999277	2.38697554559632
Merged-chr7-100868734-2	5.01938116888517	0	1.3662193720506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99093434-4	6.59868655882136	-0.0242112795674566	0.937315926169542	-0.025830436559847	0.979392585079453	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2972429702454	1.58383754133375
Merged-chr2-32404884-2	5.10220901937431	0	1.3726623294769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60817490-2	5.43788551814407	0	1.37110936703942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30787918-2	3.12250049427859	0	1.43704186967485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-38725437-2	4.076605985986	0	1.42668602461848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138291634-3	4.29388772122942	0	1.37184202154131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13891764-1	5.50604580673188	0.4347138339849	0.773374347809498	0.56210014621791	0.574047788737739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00110701584433	2.35659698994568
Merged-chr9-7240191-3	10.9657183936691	0	1.42147770996811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69756704-4	4.70032710438178	0	1.40016773894788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107738235-1	3.93187476944061	0	1.41072974079003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101352657-1	2.45438843109683	0	1.41436728702707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62968550-4	4.90979506892798	0	1.36083895007782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44581662-1	2.77335733249608	1.13441466374072	1.5433575811264	0.735030350460184	0.462321010284351	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr11-110987337-4	22.999881399354	-0.018137099945102	0.409715216366773	-0.0442675771379355	0.964691116023639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13579822281223	4.00165865037132
Merged-chr1-93011157-6	10.2533594193459	0	1.3456817018682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90259170-4	6.94941289040872	0	1.36383010394151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65605117-4	5.14621620851552	0	1.35838460331007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130784958-4	5.83222437916276	0	1.36376760193352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127626258-2	8.44089581990626	-1.68270141183383	0.844751200438927	-1.99194912177634	0.0463766405274121	0.561055048002936	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36809407398891	1.02748994520012
Merged-chr3-59185818-3	5.00582404374948	0	1.37382126931039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103354237-3	8.24396174899067	-0.782727896497058	0.631658274192538	-1.23916352951703	0.215284943774846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49186950474919	2.35163392625407
Merged-chr16-65394648-2	3.99616497105855	0	1.47988274560043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121720526-4	3.55949789534587	0	1.439125423315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80523083-4	4.81207088672777	0	1.37859517710593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73025277-4	4.56258757699394	0	1.37624515787464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83565651-1	3.2451709621967	0	1.39260949429502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128772059-4	20.5561267361958	-1.03601786559748	0.486137126369558	-2.13112270057298	0.0330790350195828	0.451124214626007	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8327184429009	4.02251769272945
Merged-chr3-21963252-3	4.52193299780038	0	1.37229022370139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57637810-3	4.27837834340282	0	1.3868390132323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102882338-4	9.08065295654029	-0.0155217521817147	1.12020249771407	-0.01385620208256	0.988944704047127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.723581231604105
Merged-chrX-10786547-4	7.97744121163498	0	1.36649008736094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142490226-2	8.08807712062123	-1.09043121362704	1.12047540657023	-0.973186209383069	0.330460763549363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.577068348605183
Merged-chr10-63347336-3	4.85065975325742	0	1.36153991135708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103719106-3	4.58682412823289	0	1.38302869936374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50490302-4	6.0205467638949	-0.694393013694109	1.3826010923234	-0.502236702653844	0.615501028197486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr1-7394233-2	3.94767722417717	0	1.38035062932724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113622280-3	4.1623615578283	0	1.40497643754718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-62826784-2	4.24606753731649	0	1.37332653974108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99216013-2	4.37204555806819	0	1.37272547921228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35495568-2	3.35703642876927	0	1.38747837555271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112335831-3	11.439191934471	-0.884802917947457	0.713408639263044	-1.24024699064685	0.214884052581029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90951035258897	1.81679776621696
Merged-chr7-100191010-3	5.03037282247892	0	1.36788612777224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120446574-5	16.6074533837254	0.322664338057453	0.494555598710967	0.65243288903909	0.514121953254925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52176692937687	3.75251522717151
Merged-chr16-44032555-2	5.14406916276896	0	1.40651838851049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34416108-8	15.1667473162272	0.479788610290009	0.494865518649672	0.969533322101722	0.332279162851156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13052297088399	4.06307769063546
Merged-chr7-59293525-2	6.03893896089526	-0.788747929839751	0.767425463109704	-1.02778441393337	0.304051249450478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92460878937686	1.77648133604788
Merged-chr19-44282418-1	5.9635254471447	-1.32393666028367	0.90838883096639	-1.45745589900659	0.144990576448521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25104685314663	1.18909650862134
Merged-chr15-80007236-2	4.45867495698281	-0.0945869613059886	0.864498460749046	-0.10941252714786	0.912875298172752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6960750002622	1.716880652154
Merged-chr13-38010261-3	7.63904640609099	4.0354422860677	1.17086819397365	3.44653848045216	0.00056781769330838	0.0236452904591753	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.97468420187044
Merged-chr7-128019389-3	5.03292844036731	0	1.39001006018216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22934651-2	2.78659757687781	0	1.52463424801579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145243025-4	9.8634324384054	0	1.34707296285131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9947259-1	1.82333502558315	0	1.59587587735022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20055551-1	4.38598447383412	1.48074753990991	0.898889669243628	1.64730732878028	0.0994948922766202	0.90837132167699	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69561508165372	2.35831499472003
Merged-chr18-50112249-1	3.53970824910815	0.0950081235535363	0.849213357319652	0.11187780165565	0.910920297799222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79801987373515	3.01910099141111
Merged-chr13-70933621-1	2.21504167291915	0	1.48947616945685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56701048-1	1.97542909028872	0	1.44344933658901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-51227948-1	2.32676127834381	0	1.47005907215849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81059695-1	1.91648254359728	0	1.48962950546233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135907711-6	19.0138714485603	1.02112080376519	0.39707934554343	2.57157874169385	0.0101235990844233	0.203290994691601	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25007801705407	5.24697319091275
Merged-chr9-68956710-1	2.45589673250109	0	1.43918161671078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55655252-1	6.65954606989578	-0.739827452196858	0.73851239449191	-1.00178068467741	0.316449527989392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46653724581267	2.29350574780863
Merged-chr10-41620981-2	2.5736840580784	0	1.39260806955459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124068295-1	2.76535010220932	0	1.40599193086925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23257429-1	2.45973189334013	0	1.45740608432681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105686455-1	2.62713631164621	2.21504271420724	1.29560236358072	1.70966245236341	0.0873283097885088	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr14-46887778-1	2.90719979885804	0.842778201555103	1.34621486584539	0.626035429363542	0.531291703056959	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.338064021838
Merged-chr6-97483577-3	10.2905973456809	-0.22756901355205	0.64034840473775	-0.35538311935867	0.722302593389054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5684140532601	4.2069046997305
Merged-chr7-34840163-2	5.42788769037521	-0.0794359098485115	0.989276765411468	-0.0802969529113239	0.936001081615032	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	1.66784418339515
Merged-chr10-20507273-3	5.61768138547208	0	1.36378211741762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129782065-6	16.8921669988849	0.0169553270584925	0.399168889387188	0.0424765744758381	0.966118785752597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90644023891696	4.10501029135712
Merged-chr18-36304525-4	5.86153078664766	0	1.37905807164046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64743238-4	12.1019813643419	1.87301454195189	0.641938093061239	2.91774948736873	0.00352567475829309	0.0960852954152258	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08209013916031	4.98268481801306
Merged-chr8-84187472-4	22.8831681956298	0.648050184696851	0.352925901818949	1.83622165830521	0.066324880729421	0.70915700070232	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17067854783861	5.79911931498807
Merged-chr13-3573960-5	11.4791511572133	1.0525618065929	0.631871307592198	1.66578509570846	0.0957562257497874	0.885390827612297	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2082769914992	3.51487209476822
Merged-chr10-98494551-4	5.74587518122149	0	1.36468353852328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82765418-4	5.87759842843423	0	1.36494346097012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64278266-4	5.50145040077683	0	1.36349783693644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86463963-6	17.8686425408489	0.485265155750566	0.406076011656286	1.19501064288749	0.232082871918802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40158484288402	4.99880897488267
Merged-chr18-61385244-3	6.39390935724553	0.312802975311007	0.793761262404201	0.394076897080575	0.69352426722569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0007239609608	2.3536102239222
Merged-chr6-88306931-3	5.06643267258673	0	1.38357850805243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-29959240-4	4.56202659358833	0	1.38036875272597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56673177-4	7.2841024424778	0	1.35597520177394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69145970-2	4.23579529394536	0	1.40321431457931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34283747-7	46.2046605713844	-0.282675382921857	0.576678707888806	-0.490178290016496	0.624007741919452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	7.14876638196074	6.89036455110064
Merged-chr10-110932020-3	4.66329433874235	0	1.36953628775925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18583063-1	4.85732317007707	-3.68950492800434	1.15826934669051	-3.18536007064873	0.00144574001695067	0.047978621234079	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16448544747254	0
Merged-chr18-69588616-3	3.71308744075611	0	1.39117986354294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95880339-6	13.4848256782208	0	1.35280645950482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151615817-4	5.07200927645751	0	1.37329631401224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94265918-8	13.3100347534631	0	1.35697515011296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103177213-4	5.9863094794965	0	1.36157230699595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31940871-1	5.33107687820763	0.544931553158027	0.882445706973187	0.617524170441213	0.536889043713741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	2.20225658013615
Merged-chr10-43707960-2	4.83578481685051	0	1.37852521929663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72203828-5	12.3930242374159	0.793510581285575	0.516005059667293	1.53779612509461	0.124098471339947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75541628522075	4.0238606151842
Merged-chr12-111743499-3	4.29107840011172	0	1.37779684530085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94702871-3	9.70884893968238	0	1.34597655747808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20207254-3	4.3979384402889	0	1.37112408795512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59498825-1	1.33355094219882	0	1.65211526970367	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160149579-1	3.12031885986688	-2.50566447055381	1.29904388590428	-1.92885282609955	0.0537491356009566	0.619702874669675	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0
Merged-chr10-80598185-3	7.42568590855675	0	1.36141902056627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46515563-1	3.19506853818576	0	1.41542176809963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75469258-1	4.13695390067305	0	1.3930854061855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-64884653-1	2.7153380942971	0	1.45210348533367	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-151424590-1	1.90582321720704	0	1.51102227434486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21158985-4	6.23061254411592	0.0333413431894235	1.14742757075992	0.0290574708496345	0.976818754807998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.723581231604105
Merged-chr1-134074308-2	6.66779908988104	0	1.37206613625109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9658057-2	10.6791379995723	-0.423003825487108	0.508581793181558	-0.831732144481429	0.405560152419441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80476964236609	3.45475328119817
Merged-chr2-148523150-3	6.80205212246166	0	1.35659665797569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94692439-6	20.5427437768932	-0.181078073060982	0.364978404153547	-0.496133664349088	0.619800109237913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84146594160174	4.62490233120543
Merged-chr7-100430168-4	7.21764911537137	0	1.37405164374072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93096018-7	17.2017015325117	0.61548729576518	0.45486085874818	1.35313312615875	0.176013104563234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94287731765737	4.52828141662958
Merged-chr10-13201915-6	15.554667763511	-0.752971145751447	0.438002925163158	-1.71910072397567	0.0855960330082157	0.825689923646582	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27280350574833	3.54742915718533
Merged-chr2-76620385-3	4.90727443951343	0	1.39150952236999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85502395-3	9.00921262933307	0	1.36902124358402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8931151-1	2.43940741918274	0	1.46529686455759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161443885-5	12.9762753956655	0.0492163631754507	0.601330520027452	0.0818457762183829	0.934769353997658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03549797332798	2.72304815886778
Merged-chr9-45121952-2	4.50093970601491	0.544223876187414	0.906621641975435	0.600276731759466	0.54832182315144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	1.62598992477189
Merged-chr10-56441167-2	2.4375616337818	0	1.69133839118751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84352742-4	5.50173385935248	0	1.37612907448805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125213243-1	3.87532333360243	0	1.39431474919526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31069278-2	3.59597002050069	-0.564280581478586	1.27515955987023	-0.442517626214568	0.658114678289887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.601513806634888
Merged-chr15-39232933-3	3.99077495309516	0	1.38406720117628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61077316-2	3.44958087418618	0	1.40641536578665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37517674-3	5.79895430947021	0	1.40639706063784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45117034-1	2.67802954199382	0	1.43764852704686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-127330443-2	4.69431815875594	0	1.41000286264477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75887012-2	4.99997985403526	0	1.38866562218826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85560139-4	6.26719456965293	0	1.34938251190558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107347537-3	8.0319579447546	0	1.36876055791617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102368929-1	3.71049416699513	0	1.44272566561914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44182581-2	3.43600028108014	0	1.43315626087991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57528727-3	7.24529602474125	0	1.35532798556712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141404981-4	5.9574501831408	0	1.37366940984032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99476763-7	18.3922402397055	-0.422144903006951	0.358405656588876	-1.17784107266808	0.23885997095446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89941523470821	4.4999028852494
Merged-chr13-112258695-1	4.24705774951574	1.07360259800524	1.01567735798979	1.05703114237979	0.290497374713746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	1.7877231627864
Merged-chr16-97523248-5	15.1335437543671	-0.0187824707827076	0.476882574790267	-0.0393859448334177	0.968582685613405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49606850931057	4.29376600026714
Merged-chr14-78725268-1	4.12722749884022	0	1.38228475269714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95006759-3	5.43773224696778	0.288669938276598	0.953970832537981	0.302598285430393	0.76219602127637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.44790810950236
Merged-chr1-172143778-3	5.25310342340841	0	1.3554975526817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43928713-3	9.9825513022199	-3.12455509381182	0.745243090453651	-4.19266563331679	2.75695650703333e-05	0.00201974930951246	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61684495365026	1.54726712393679
Merged-chr15-51955803-4	4.35481127015599	0	1.38041849984022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31003379-4	12.1620104687426	-1.72041633477397	0.671430901469907	-2.56231330879709	0.0103977472068443	0.206618626402439	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76771232153608	2.28966581249056
Merged-chr18-67769868-4	14.8253400379178	0.377919699631593	0.505809564202814	0.74715807366596	0.454968148652538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90351574482649	4.39331969865055
Merged-chr1-120550167-4	8.55201221136624	0.51337611897141	0.914497925916118	0.561374831394095	0.574542037980292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	1.06915898720181
Merged-chr3-101003930-3	7.17275680174388	0	1.35421695495914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147911907-2	5.97574433382723	-0.703871488555989	0.837125294878061	-0.840819758837317	0.400448916152735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13115973951627	1.34263109599227
Merged-chr8-120124453-2	5.29732160911343	0	1.39219100387103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77832223-4	5.46721595183591	0	1.37365225944038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16045609-3	4.29285769652718	0	1.40282413534381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159269310-1	2.74795604746711	0	1.4015097713071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125579100-1	7.61975467255368	-0.997906331560623	0.804858769377879	-1.23985271643615	0.215029875567497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59657321676073	1.92611868668269
Merged-chr13-107923884-1	6.55335051268422	-0.694502459101505	0.664111523260123	-1.04576179568786	0.295671023988132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34276853781599	2.32834156555516
Merged-chr6-134102606-5	13.2371684271355	0.28627048683662	0.514917914819427	0.555953635711064	0.578242550537057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28929836021151	3.77105652662295
Merged-chr3-116186618-4	6.86806276550605	0	1.39903630231077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16309793-4	5.58304535172187	0	1.36611593780943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108408343-4	6.05043287396224	2.15101482648867	1.20520482899023	1.78477116482422	0.0742984423183388	0.759483953055552	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.765562747387088
Merged-chr12-110844809-4	9.43172622472266	0	1.35143255631475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97509600-3	7.53922765399935	-0.40541106645862	0.843837902203545	-0.480437137748797	0.630916592272273	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	1.39949824061849
Merged-chr18-43492978-4	4.70527045053425	0	1.38959174318564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-65106082-1	2.13284178669457	0	1.56098786280526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174171287-3	5.94661572711649	0	1.36820686621597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74918812-4	6.39431848110002	0	1.38080808708609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186202712-1	2.52530371964898	0	1.57981177680958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-42034248-2	6.31369555864005	-1.28217725261406	0.73593690022889	-1.7422380264059	0.0814668026081045	0.802401508058335	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5849767083096	2.40092412581794
Merged-chr9-7259880-4	5.30381303414763	0	1.36680750521603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-3982924-3	5.08852161021318	0	1.38538153161353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120303112-2	4.66943814600695	0	1.37466973086179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34378567-2	4.19830111840013	0	1.38947911538367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108751535-4	7.93475475004409	0.566196827006608	0.813921916078285	0.695640227670378	0.486654166789437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29451429493117	2.12382511851675
Merged-chr8-47872505-3	5.29378923153187	0	1.37886300487919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104300120-2	2.87625578438322	0	1.43620982092269	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44415287-6	15.7165868841181	-1.45218210428555	0.57252449177818	-2.53645411705493	0.0111981416028911	0.216703374649896	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70759181182713	2.01161228884919
Merged-chr4-3648409-7	20.1500252779597	-0.044081628336146	0.416729576217794	-0.105779937042692	0.915756955388383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91910873490697	3.89322384666492
Merged-chr5-105506592-3	7.73020147826538	-3.83691731357202	1.14003264633957	-3.36562055998278	0.000763716848175889	0.0291128219845674	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80367142236436	0.679405493272835
Merged-chr11-20656070-3	6.94658275122779	0.747218157184489	1.06776937948603	0.699793580467877	0.484056224380722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.788686275880602
Merged-chr9-35099507-2	7.05530531959063	-2.75683768446834	1.15474041801523	-2.38740901544504	0.016967602103554	0.288863727762948	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26857811924232	0
Merged-chr13-107917779-4	5.69909433710104	0	1.35842687376387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59459474-4	11.0974430392985	4.20850564937396	1.03023328126502	4.08500261630683	4.40763199415743e-05	0.00298003069117417	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.69580612506373
Merged-chr1-184230626-1	3.35973426211218	1.83028462374567	1.43573566517376	1.27480612771723	0.202377871276486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr11-17733242-1	3.09043701558337	4.54833337891625	1.2797428718673	3.5540994045778	0.000379275829380536	0.0174552631784231	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.89801108671116
Merged-chr15-66272594-2	9.25202830082573	-0.153555931266289	0.633682677239722	-0.242323069229489	0.808529839706942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67739773165704	3.78553625167002
Merged-chr4-12498628-1	2.37800553768129	0	1.50289404944705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46848406-1	5.14717855533781	-2.07801278861791	0.994484640122758	-2.08953733901954	0.0366593804272809	0.480648157415959	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05317232150345	1.40024388691264
Merged-chr18-79271604-1	3.41950486614309	0	1.40857530073943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44066037-1	4.56462872247766	0.974558700962725	1.15344064500671	0.84491447841866	0.39815859009235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46981335012887	2.49266796147315
Merged-chr2-167385523-1	1.61924088383603	0	1.64514998077606	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132606304-1	3.3543825444375	0	1.39589727176291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21009288-3	3.55111732178905	0	1.40483040772135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-195002950-4	5.26817877494634	0	1.35827979696874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48225844-4	6.58671446062026	0	1.3767330776364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97422766-2	3.83621555313945	0	1.42958585440346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-65046275-2	5.5368701765978	0.248364624162668	1.08577270440863	0.228744582686799	0.819067441338928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.58383754133375
Merged-chr3-19986338-1	2.30672820085103	0	1.44369249209521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84366163-1	4.07105084312299	0	1.43403136963449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113305570-2	3.12589781822475	1.82302845971489	1.29974478503181	1.40260494268517	0.160734677100488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr11-77355204-1	1.98669449607661	0	1.52740211848536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80719467-1	1.60824472725484	0	1.54782571302488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91508234-4	7.77553321325437	0	1.36843476464194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122022448-1	5.1804376958046	-0.771710214900184	0.911650814057946	-0.846497587673007	0.397275219026704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36881257059414	1.6227392896897
Merged-chr19-11970542-2	3.90422087113874	0	1.38388183157343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-10750328-1	2.36562233381882	0	1.59844913539691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91000096-1	1.29503376089739	0	2.35423323704854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5830158-1	2.23164063662933	0	1.4364062963872	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76387991-1	3.27168809103648	1.7421502373066	1.35310640128267	1.28751902707366	0.197913442078923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	2.52533395134067
Merged-chr6-13597252-1	2.64035825122051	0	1.42820350210687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47182298-1	2.81499806622491	0	1.4205950077538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156860583-1	4.042046030815	-1.06915850512877	1.12209054854955	-0.952827297681818	0.340677580945168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.577068348605183
Merged-chr4-53154963-4	11.0108979734999	0	1.35008252319394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66293732-2	4.44106252421499	0	1.36986148162022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60550500-1	1.00760879922901	0	2.08716004874699	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119424072-1	2.51925660905537	-0.868784019873427	1.41896110808856	-0.612267675922238	0.540360672228641	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26857811924232	0.723581231604105
Merged-chr1-161379059-1	4.63144496932218	1.19942154138239	1.21338253487404	0.988494153253082	0.322910696477276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.28067447403188
Merged-chr13-119601502-2	3.27655039111773	0	1.49569597425336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32645913-1	1.52731875328956	0	1.63595541036932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60481905-3	5.51018293648905	0	1.357418214234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92345270-6	16.1468124401165	-1.10796741857412	0.838253893470318	-1.3217563642767	0.18624929301011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16448544747254	1.32509503823899
Merged-chr2-103906891-7	13.5033463423547	1.84299639836892	0.887080824517645	2.07759693077692	0.0377464991163443	0.489545280322745	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.20145723341397
Merged-chr16-45148719-10	40.425991746855	0.040358366081033	0.339995930654424	0.118702497419164	0.905511057885338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42081360126602	4.41290342146397
Merged-chr10-117304569-3	4.23941523855411	0	1.38144105608285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80245855-3	5.72265390826057	0	1.39675359766343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30686667-3	10.3472693966806	0.490281023680957	0.539985790524789	0.907951713330223	0.363903733786953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74513974358707	3.6263579863116
Merged-chr8-121925814-5	15.6243272407733	-0.607483138125357	0.400595169747075	-1.51645148020358	0.129405230191152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18866328668817	4.54372641214755
Merged-chr18-80119073-2	4.9872807796645	0	1.38469885870155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57332480-4	5.62472606580305	0	1.37998232033697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70943398-2	4.43950896215933	-1.75527212153967	1.16204316834238	-1.51050509082509	0.130914591363579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87791898198041	0.577068348605183
Merged-chr15-6602656-3	6.9412261839979	0	1.36693192777843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41088453-3	5.1051491823601	0	1.36543113150041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125563864-2	8.50586809151888	0.829128182868201	0.934606686793843	0.88714129118048	0.375002835778726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.4068548238317
Merged-chr15-101105590-4	7.7671650204413	0.873752346419062	0.723773405442661	1.20721808766194	0.227348166411697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	2.50631257432875
Merged-chr17-27561229-4	11.0173782559356	-0.0340503421460988	0.795080343067355	-0.0428262910069382	0.965840006018889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45575152610536	1.43996574690471
Merged-chr3-96069848-4	10.0538077007329	0.0840786590548873	0.829925017136948	0.101308741535397	0.91930537715683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03169262342392	1.92755195211066
Merged-chr8-119827570-4	6.51315221259039	0	1.36483880529986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-65421656-4	9.3292620339486	0.243579993075738	0.656806469661256	0.370855045324634	0.710745499845847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40252732300985	2.94216714350491
Merged-chr5-64813622-2	4.20651499719676	0	1.38434595488622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120914704-4	7.86455465122855	1.81223509903999	0.842215432302836	2.15174767587061	0.0314172329416969	0.436617608739689	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.33461518298448
Merged-chr15-81080646-4	4.80728254690302	0	1.35803583885026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84703341-4	9.85822146103448	0	1.39378608443427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39619652-3	10.1477695083476	-0.652324374763668	0.836726942226669	-0.779614402074498	0.435617876119159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	1.14143228603163
Merged-chr2-27699695-3	7.74390346061994	0	1.39558414071637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191880262-7	22.542000468372	-0.558568985862987	0.417069836064904	-1.33926967994891	0.180482895558261	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13571495897337	3.76258349320021
Merged-chr11-108011260-1	6.24143527271453	1.21106842059402	0.768225999683574	1.57644810393406	0.114922569782829	0.990276964014969	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84016081186083	2.66362638222948
Merged-chr1-87873221-3	6.00029077626581	0	1.37243800249941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55250590-3	4.28014960806243	0	1.38961021947832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-85618931-3	11.2134969242989	2.88558739497731	1.00617143988582	2.86788839415354	0.00413221269897012	0.107939908747389	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	3.17113043838547
Merged-chrX-107144124-3	6.14813500152067	0	1.36685195435334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54777762-1	8.03683362487553	0.25825467347296	0.551304482231038	0.468442905502684	0.639467891461952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3137690657033	3.41648753261811
Merged-chr12-76490981-1	2.31226844359586	0	1.69662117498543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16016305-6	11.5979888955723	0.049667958100199	0.814509921218446	0.0609789479616154	0.951375974942362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	2.34871576270704
Merged-chr3-41599924-3	4.79613176423319	0	1.36246277410272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64210775-1	3.201497623324	0	1.43726339442963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-53449553-3	5.12641962494452	0	1.37206909000632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7887277-1	3.24655009531885	0	1.40046452337574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88482205-2	4.10942856757409	0	1.38021591301642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87016566-5	12.0797504928193	0.184048325393194	0.625117217679197	0.294422102268259	0.768435379809094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.777595139262	2.84199678911687
Merged-chr6-108444675-4	7.42566618548689	0	1.35850050118286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89883760-1	3.54396971432538	-1.89592445008141	1.29895045956138	-1.45958180015703	0.144405044173955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03300427768847	0
Merged-chr3-87255456-3	8.45651834552848	-0.636927233960117	0.622735442792314	-1.02278943864857	0.306407412628671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73737634337609	3.30506886574008
Merged-chr11-26522807-2	6.97691676105848	-0.0380906324450921	1.16999708389139	-0.0325561772499495	0.974028516777283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.723581231604105
Merged-chr2-58920297-1	3.51710022462867	0	1.46647470321336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146030387-2	4.21063688903576	0	1.37747053360551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-22417726-2	5.79711435147082	-1.37467098334825	1.01363117157787	-1.35618459839624	0.175040441137173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	0.67591700901439
Merged-chr6-120190575-3	4.20147423201685	0	1.38567215481424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8816753-3	6.11798879071877	-1.55405170761481	1.01534127842084	-1.53057079490732	0.125875504271544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57928534738074	0.67591700901439
Merged-chr9-124143165-2	3.08682026495098	0	1.45568519835652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39319009-2	6.638565234207	-0.97006874505781	0.78550547599442	-1.23496114884462	0.216844963730929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95451050129477	2.45531426399749
Merged-chr13-75761087-1	3.69958298299695	1.96408813461082	1.41025232370288	1.39272107664658	0.163704152543565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.30064958020929
Merged-chrX-93690923-1	2.05199606055594	0	1.4479826277091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95618743-2	3.65549689273681	0	1.58963306506343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47311073-2	2.61847640939449	0	1.54622193840015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32765269-2	3.77301764415305	0.234882398117954	1.17295598457101	0.200248262686395	0.841286423324639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.662147012823607
Merged-chr10-59296468-4	7.00827018927546	0	1.37621264550769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43241430-2	3.70536307599526	0	1.38497152110703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41500975-2	4.9138794583705	0	1.40084621407981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96394210-1	3.73486066334796	-3.37570724519177	1.3933810458345	-2.42267343544209	0.0154067695112189	0.272179585264982	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	0
Merged-chr18-35747080-5	9.44211710468081	0	1.36323922924875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4536707-3	4.96086784428277	0	1.36742035032042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97929169-3	4.1302409467382	0	1.40732809455009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59728602-7	19.3277812937147	0.49888950873113	0.418621485172178	1.19174367872193	0.23336176570657	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59171063471833	4.22527574230509
Merged-chr17-29371221-10	27.3799311377123	-0.906268967908467	0.364870125125816	-2.48381247326282	0.0129984238616368	0.241995150827261	C57BL6J_F1_Control-BALBCJ_F1_Control	5.78896923892497	4.89767734047036
Merged-chr7-125473964-3	12.1166104463919	1.59900539745926	0.676240300938304	2.36455206121343	0.0180518899589803	0.299536839523874	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19193974227778	3.55402102225216
Merged-chr1-180289964-3	5.29918943105318	0	1.37019594555037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6029420-4	9.81178926686207	0	1.37406102151569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13898036-3	4.89667714859762	0	1.42107598385798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9897161-3	4.87540873556234	0	1.3696938772601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170510753-1	2.94630322180719	0	1.42499901761229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142370592-4	4.84814094764405	0	1.43531189244297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105299762-1	7.18431159472716	0	1.36654160502226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87354667-1	4.83209221426647	-0.475090571002407	0.944831773451088	-0.502830857674371	0.615083196464468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15864683236642	2.28812082625435
Merged-chr5-92367905-3	3.42705432539296	0	1.41474852587358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20696934-3	6.02437012767753	0	1.35662390120569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79243668-1	4.15292383516448	0	1.47400624289203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53265209-1	6.61316907610396	0.247571521016904	0.529156600048275	0.467860593620713	0.639884285404688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42265825385255	3.67703411596376
Merged-chr14-123837579-1	3.73953265405083	0	1.39852888081658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88222118-3	4.41860788822772	-3.05342319869574	1.17763637026506	-2.59284043512387	0.00951869220792345	0.194302136586748	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	0
Merged-chr8-125227463-8	24.8484322215247	-0.202597601718302	0.435824169525669	-0.464860867947732	0.642031095428521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58782911407628	4.06659037417473
Merged-chr3-90644381-3	9.45326491895309	-1.23881742952484	0.688181418159325	-1.8001320536063	0.0718397893976138	0.743694365238029	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35769076145335	2.84535741655012
Merged-chr1-64867879-2	3.40442673021948	0	1.41095562336285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-4969858-3	4.7751875056504	0	1.39237377606115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70768971-1	2.84283247953341	0	1.40098475379598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117983511-1	4.30056102149592	1.26549462887885	0.999236788417292	1.26646120674089	0.20534800970224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.12382511851675
Merged-chr5-122109965-3	6.54411133482037	0	1.35214160403193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128235760-3	8.5798575552913	0.528656905769272	0.656573465337985	0.805175557158916	0.420718379407074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83545655066484	3.41958248251718
Merged-chr15-6622704-4	7.73963301812854	0	1.38514625235488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68282986-2	13.5605078399239	-0.920986190307045	0.582799611514748	-1.58027934835667	0.114042907136692	0.986305211236326	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7506660875572	2.50773376845066
Merged-chr9-120564694-5	12.712810492575	0	1.339930801134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91034148-1	7.38912998217061	0.149361657371793	0.774137549142125	0.192939429869164	0.847006404584164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16610210922829	2.70183972804649
Merged-chr15-74929591-3	14.9556057510957	1.01661182457939	0.448929433840217	2.26452477371137	0.0235418578202853	0.360685414107352	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9186122570587	4.40637094131899
Merged-chr14-51841899-1	5.64810603098231	-1.10831577152889	1.06637482086043	-1.03933040226383	0.298651100079908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	0.977057525713991
Merged-chr3-108767102-3	3.23769729347631	0	1.41448088846153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41243289-5	13.7676530442711	0.165819226795427	0.691313724579966	0.239861036892008	0.810437987219615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89494333369275	2.45058969017581
Merged-chr16-10982751-2	4.18728871137766	0	1.38698275432058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75089144-4	7.75512736689682	0	1.35898465542195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101302264-3	4.34381973315419	0	1.3777917301661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69005431-3	5.63472404198622	-0.035257026699757	0.888816319305087	-0.0396673935142442	0.968358297412841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.30064958020929
Merged-chr4-139170397-3	13.2526815147626	-0.888839120219521	0.492178914609628	-1.80592685674986	0.0709297653967357	0.737362998126058	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94100310931151	3.70595917844714
Merged-chr15-79436738-3	6.35833444561281	0	1.38693484358799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54227054-4	6.92439583522595	-0.755269162464684	1.05711592191339	-0.714462006302618	0.474941541757885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.577068348605183
Merged-chr6-129211478-5	13.0425452679296	-0.0351661448293528	1.38893308919882	-0.0253188185254034	0.979800663729609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr15-85653931-7	22.3394740032735	0.415915750312169	0.473232485584067	0.878882500635691	0.379464987823015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86273285333666	3.53496971959432
Merged-chr17-34349583-8	22.8244845087316	0.285716598656896	0.362653618285116	0.787849849693951	0.430784538475641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88418079652306	5.20094916948417
Merged-chr8-82940573-1	3.90630181600105	-0.050954627897591	0.966347990127132	-0.0527290669801957	0.957947779133588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64538595732494	1.30064958020929
Merged-chr17-27937020-1	2.85615911356545	-2.31661791784559	1.34644278792779	-1.72054686512966	0.0853330824847917	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62319166842064	0.601513806634888
Merged-chr8-128590505-1	2.65971138299647	0	1.39755798387663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34074682-2	5.02943307532882	0	1.42248848542274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134417370-1	3.12152257739013	0.651737290163813	1.4783559460106	0.440852753981578	0.659319599325716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30806904914164	2.28636004977218
Merged-chr11-69419538-1	4.01648518307264	0	1.37063521942204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37301907-1	1.65965039717992	0	1.59082390231118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13384931-1	2.55748229600735	0	1.43222424937025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46315430-3	5.67391512428024	0	1.37608508392221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142738119-1	3.80879876898708	0.338844547013816	0.867921275411199	0.390409310859766	0.696233903980236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82878860577045	2.88152647747617
Merged-chr17-72890292-2	3.49526677071153	0	1.3965311480491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88291565-2	6.26020405629137	1.06988398871257	0.946661718317351	1.13016505052538	0.258406683443495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51909402565592	4.25096827277076
Merged-chr2-178013492-2	2.76870476255618	0	1.41058630199272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170055693-1	3.0354372477814	0	1.38389895795596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99271645-1	2.4299704320396	0	1.42916004369496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55455592-1	2.21883964688854	0	1.46139454664998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111608948-4	8.12971870901336	0	1.37042775265266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64358529-1	1.24315863177648	0	1.75118351102518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41104685-1	3.89091957816179	3.54729093369439	1.28033855153815	2.7705882396752	0.00559551366879319	0.134349172933714	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.08695703474815
Merged-chr2-126427833-1	1.28329583549053	0	1.61743595757725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43405289-3	4.23103950093614	0	1.38636610127324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-57712732-2	2.90325478633683	0	1.42021080448581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156258222-3	10.4050186491021	-0.691751045509518	0.711662948031547	-0.972020599671368	0.331040300567294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90170250395106	1.72472474440372
Merged-chr2-4504396-1	2.12232016271993	0	1.43451859427539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12780701-1	1.95716515524371	0	1.46626475962448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36745211-1	1.77290940130187	0	1.47646568773679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33399726-1	1.79013377750329	0	1.6122988244109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23975862-2	11.4862767985203	-0.0406360867620322	0.531518288780635	-0.0764528476626009	0.939058826240351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81525489107013	3.77348931258109
Merged-chr18-76012188-1	3.20708380931024	-2.87306184740575	1.30486254251101	-2.20181187964594	0.0276785995831823	0.401864581929008	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39039253344948	0.413263464506793
Merged-chr7-19475137-1	4.66804357283566	0.119025282467057	0.934357528141688	0.127387299702912	0.898633867716412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31917258558244	1.93767985261141
Merged-chr10-36888321-1	1.77803971973984	0	1.52766692867803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69204017-4	4.89163051630138	0	1.38107987667854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134374735-2	3.87945410589598	0	1.37513121882565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40936583-2	4.0642139776129	0	1.3871446448694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103987604-2	5.37086396343126	0	1.37621815507268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56425444-2	3.52782480305626	0	1.39631076996842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25415410-7	18.0225100022134	-1.38863100134917	0.485769376801044	-2.8586219462696	0.00425485533361702	0.109615962597198	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25991490583881	2.57460788078034
Merged-chr3-95674927-6	13.4932420858647	-2.68462340332515	0.71107003081758	-3.77546976665351	0.000159706395293912	0.0086297017313934	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63531342397581	1.14143228603163
Merged-chr6-125516206-6	17.7596927923968	-0.270338292742008	0.490083800180538	-0.551616463638302	0.581211154223161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72320374965776	3.9815656435411
Merged-chr18-67194392-2	7.88244783474111	-4.12154703722322	1.05814730708698	-3.89505979897034	9.81745062681158e-05	0.00578187214109264	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56615894452728	0.41385117919798
Merged-chr7-67529261-3	8.47262926293386	-1.22527567797295	0.55953964189934	-2.18979244046729	0.0285392932360877	0.41074065158075	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83604753826494	3.62564710698102
Merged-chr10-21670429-4	12.702800239025	0.702710600262761	0.571906622479944	1.22871562007031	0.219178447655067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68850931460485	3.83383857432393
Merged-chr4-130829490-1	3.8367565893457	0	1.37608259179835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31000716-4	7.29856209456991	0	1.37679010077153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61498936-1	2.80736908163758	0	1.51097205218524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122059670-3	6.56595419666991	0	1.3604680969786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92930256-4	13.5452873356878	2.19181174747669	0.764513604345918	2.86693622587907	0.00414466523152673	0.108109336526181	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13939166524368	4.07496625504955
Merged-chr17-24540543-8	19.0753049049846	-0.468694532505719	0.45296218690212	-1.03473213892575	0.300794022432355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3635861969707	3.10641353471097
Merged-chr7-63822165-4	6.42579029824522	0	1.37599817055119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102417604-4	5.95620489697717	0	1.35250720168902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47080428-3	11.9157604630518	0.651563900120438	0.534782487306581	1.21837179710582	0.223082717500415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40358289533015	4.14528577907113
Merged-chr7-120124958-7	16.2609211144187	0.327169905611226	0.531021991258729	0.616113665717884	0.537819503340402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10691078843424	4.09690202424182
Merged-chr4-41129586-4	4.09997200215183	0	1.38055805899005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118934034-4	11.6066951983378	-3.11488182377433	0.673323332674457	-4.62613082395636	3.72560023830511e-06	0.000394007594073983	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75364247148603	1.99374635525727
Merged-chr10-90983269-2	5.17234206774137	0	1.46408008195966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29875001-4	14.2194358792306	0	1.3497485140149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14974805-4	9.83432519391629	-2.9412973825444	0.823755498976463	-3.57059514163977	0.000356171052095821	0.0166475513507109	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85806455998443	0.662147012823607
Merged-chr4-132555751-4	6.38034476652964	0	1.36772562772587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150257402-7	17.4568575553821	0.52811085422012	0.420331623223355	1.25641475692514	0.208965634085294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21591888190447	4.93329616677907
Merged-chr3-87243869-5	13.3530825624068	-0.249413340921112	0.595687053397594	-0.418698609443572	0.6754364120793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66174789280699	3.41289709669443
Merged-chr13-55421289-3	7.07464404949478	1.72780855154816	1.06526167583383	1.62195692452347	0.104812571641929	0.939097837791927	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.4068548238317
Merged-chr6-87517283-3	9.57190117819463	-0.118747969855229	0.649420467529758	-0.18285221330784	0.854913978887233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91051152313715	2.57366010732537
Merged-chr11-119433808-3	9.34588995051741	1.34778898359145	0.802215322524633	1.68008382007696	0.0929410084610588	0.868818620625055	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37562316341215	3.04278643050236
Merged-chr1-82832655-3	4.26161479638117	0	1.45948135024768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13259673-1	4.82841060250732	0.144434834363092	0.868278259946924	0.166346252147234	0.867884469101231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21550655935007	2.43500096242756
Merged-chr1-34855878-3	3.98930816316702	0	1.38328297546199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78526238-1	2.27234416852089	0	1.49033407855601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37969565-2	9.52033457990387	0.358550575752706	0.750923765157739	0.477479329312995	0.633020836724231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8372990371539	2.75802553742499
Merged-chr1-71811438-2	6.12159925369563	0	1.36340471645552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3607431-6	15.3682033496093	-0.210533194133296	0.481144012503679	-0.437567939456976	0.661699516316375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11178402292607	2.85855503988726
Merged-chr3-79438458-3	6.88191153980579	0	1.38665273012968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48586526-3	10.9307053626918	0.180257369757462	0.592362746933867	0.304302339555438	0.760897562917643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07465453701223	4.00411085782437
Merged-chr17-8508466-2	2.92019280524961	0	1.45981805542724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111427895-3	5.10465916505547	0	1.3826066279843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41678950-4	5.54144935152262	0	1.38098017199664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76780713-4	12.0535541345428	2.43632755919632	1.03259158917823	2.35942998638526	0.0183030342730742	0.302503691106731	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	2.3122765174973
Merged-chr13-97203841-3	4.64463905013812	0	1.37735873290407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70462108-3	10.3944893491154	-0.870512618443967	0.707386741578309	-1.23060352601703	0.218471185837145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51078580148743	3.67749848086351
Merged-chr9-106858244-3	5.99862979009831	0	1.39256106155782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24519505-6	15.0273001318749	0.334521648480423	0.528408113352507	0.633074398419124	0.526685059906688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99775004050922	4.53835590448925
Merged-chrX-38466248-1	3.21075342714757	0	1.38989295087452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145347048-1	5.37396552538625	0.23303020447027	1.01904510915086	0.228675062936563	0.819121478146923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	1.716880652154
Merged-chr11-79905575-1	3.04321942359229	0	1.40171576366915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-5289588-1	4.22136413214292	0	1.41288871016451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24965567-4	9.99917446072495	2.17180279970268	0.826273214168595	2.62843180979547	0.00857795514956943	0.181647473305588	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	3.09947096343061
Merged-chrX-12007292-2	5.70121273182743	0	1.36907837868179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103587517-2	3.65973714941912	0	1.42136713562981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112264278-2	2.67242665308747	0	1.97221710636367	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95192241-2	3.00422569834045	0	1.42018330677108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15201049-1	2.59242300532196	0	1.46795904055562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40475915-1	1.52471008554797	0	1.74280645603656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130715325-2	9.01279056725387	0	1.34792473032333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8956035-2	6.6881095525694	-1.99760937726261	0.978716822287699	-2.0410493942398	0.0412459176972604	0.518042245865383	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96819405909084	0.724326877898254
Merged-chr4-154924218-2	7.66698236913849	0.107103571481136	0.790328573558401	0.135517777117572	0.892202509802407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05271282077275	2.19024002142095
Merged-chr18-50045031-5	11.1419545563671	-0.060566575148694	0.569577726017571	-0.106335926392644	0.915315828028584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7416333111364	3.3550175826973
Merged-chr17-43579905-4	9.52497730902384	0.835865708098057	0.624563753492293	1.33831927233089	0.180792382010055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69949531895937	3.09175831272035
Merged-chr13-24684683-4	6.65226527970092	0	1.36801838840651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11016320-4	8.58877130064559	0	1.38240219969293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83850958-6	14.5469555524489	0	1.34079866626865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46488743-3	4.75784803526782	0	1.40004253186235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61324279-3	8.23113606842801	0	1.39394233436576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35317229-5	14.749130149532	-0.781405403995385	0.621451369019034	-1.25738785518944	0.208613224782609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22387126728601	2.29551975980701
Merged-chr19-42714010-1	4.17624547736656	0	1.41115175728545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70812098-4	5.06939760649378	0	1.36636148817053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135871159-3	5.14643663755911	0	1.36280542306232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156452170-2	4.87643177054977	0.475840912087663	0.970791432362645	0.49015771691515	0.624022298756364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88508609669565	2.05996425538702
Merged-chr16-11352112-1	2.94862354869098	0	1.40631522444223	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101984085-1	6.32096939718274	0	1.36521578988873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97484379-1	6.69893207877681	-0.0828777421371437	0.770334490185427	-0.107586695381112	0.914323551275021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77057152405559	3.36486630434661
Merged-chr13-98809260-1	2.60384586463591	0	1.41959138190066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6569936-4	6.97504531616495	0	1.35238262828762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5495698-3	7.0871110448902	0	1.44893895486041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78671646-4	5.54119466415818	0	1.3963376526713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34259328-4	7.27177996958957	1.06623227526367	0.869531579137036	1.22621455142762	0.220117946780196	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.76415777129835
Merged-chr3-95673363-4	6.53858948597119	0	1.38007860983903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87122416-8	17.8910251865106	0	1.35038091852768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140141528-4	4.25133513060627	0	1.37383290155826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116472766-2	4.3084258998574	0	1.3819096435086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36318811-4	7.80942862159182	0	1.35689687786983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134509171-4	4.79560380701069	0	1.37649386108901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79251067-3	4.69110944764215	0	1.38476906893166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23172487-3	5.97947810769658	0	1.40357849532623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66888140-3	5.07802657285671	0	1.37302977252658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45105856-2	6.60070598165829	0	1.379143109172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20240688-7	24.0751969347436	1.07753852760247	0.373655123813889	2.88377827287382	0.00392935310621809	0.10383144877838	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15191187047571	5.33231222366576
Merged-chr14-27378514-5	12.5458949779248	0.710627339768006	0.677173509470465	1.04940215444001	0.293993067060258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	2.44014985847124
Merged-chr16-21353817-2	4.31756427025303	0	1.43623368952023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109143580-2	3.70407185295987	0	1.39492183438294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157458624-7	19.9351245874595	0.543156356090261	0.450376126790918	1.20600609974697	0.227815138504934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92149536290682	4.50896836608251
Merged-chr12-105981576-4	9.20920712615795	4.91103777801713	1.03569241598992	4.74179177349979	2.11836292398256e-06	0.000239401434895568	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.3294597680113
Merged-chr17-36024220-3	6.4171012270886	0	1.38307810347518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76201473-4	7.52355296496888	0	1.35909113799198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-39003590-3	5.6200252898419	0	1.38748347988641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120288634-3	9.61340214785411	-0.696181934258397	0.553825292536418	-1.25704250715963	0.208738243858771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49869378155033	2.91941810723258
Merged-chr5-130129570-3	6.78584487823296	0	1.37594152173207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90738948-3	20.7934908684982	2.53282527576277	0.5936017835223	4.26687612145226	1.98229158408166e-05	0.00155967857462284	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60978507060531	4.8712434315133
Merged-chr11-45967098-2	5.79637338622577	-1.17092590158275	1.2341679760609	-0.948757320150214	0.342744053456215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	0.465515277017237
Merged-chr2-130256893-1	4.31367142088076	0.0884694717348688	1.37257661418375	0.0644550335629025	0.948607910637857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	1.25056711339808
Merged-chr10-40353866-1	1.91368343017817	0	1.43444810437652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52442250-1	2.40670332565067	0	1.44232032176562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55195916-1	1.94692334051522	0	1.48592544425014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118998769-1	2.32084886091067	0	1.41703593362382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6647204-2	2.6650643863579	0	1.47646966186798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37142029-4	7.94234401120054	0	1.36372591398585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160603513-1	2.58475091041106	0	1.42809787765749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36588179-1	3.75237723340059	0	1.39524450066681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27278375-2	3.4171836332779	0	1.44704481776146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124643618-1	1.82200810460469	0	1.48558659036052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89908144-2	3.41258587236459	0	1.39272105859508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73476394-3	3.26025732589137	0	1.3948612840175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60839020-1	2.18677656541779	0	1.47759704353306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64818586-3	5.84087244449829	0	1.407426685419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74624648-3	5.3464825306048	0	1.37201588025926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108474783-1	3.84849848614084	0	1.38520636133425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-52784127-3	5.19445428881958	0	1.40169227146116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56637362-2	3.71971543447054	0	1.43127573421913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97667472-1	3.64053921719741	0	1.38309687071696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39602135-1	5.16909016465123	-1.80335517408388	0.885413370303691	-2.03673813223008	0.041676291075507	0.522120651434313	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11162528359824	1.16492870185157
Merged-chr1-166799242-1	1.56122871470592	0	1.58009918704084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106385470-1	5.53924905404443	-0.688243060794673	0.834120296177844	-0.825112473522562	0.409307738714694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48586599042228	2.0616452534421
Merged-chr19-60731065-1	2.41585578671361	0.221735168782747	1.38060371312727	0.160607397093322	0.872402628499517	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.723581231604105
Merged-chr12-55485167-1	4.96624430393822	0	1.47635848032322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100885781-1	2.05698228841882	0	1.51811350297289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79089542-1	5.07342581264762	0.284004517523505	1.24050820945549	0.228942070160234	0.818913941553606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.02748994520012
Merged-chr7-84212182-2	1.99345806701016	0	1.63545052794121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136394688-2	3.87516952793175	1.78018923921707	1.03916234652642	1.71310021496416	0.0866941045040466	0.832321587201602	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.08990416182602
Merged-chr1-60860733-3	7.68265815059894	0.150287410238786	0.691417511213544	0.217361301675754	0.827926787013788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09296523225154	2.67898613390668
Merged-chr16-55808435-1	2.48464311319494	0	2.10291637512913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27242306-1	1.30770546235245	0	1.53768413758369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98703800-1	2.5983652662161	0	1.41562404685584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59889554-1	2.040079868381	0	1.48769195931606	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108472009-1	2.11115342857444	-2.27855070237612	1.50336111928303	-1.51563764231364	0.12961100333553	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	0
Merged-chr15-8776856-1	1.9908371607273	0	1.50322075081314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-146946568-2	3.53490339793125	0	1.39812639239546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136253070-2	3.70678789555667	0	1.41334366987721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109872517-1	3.48535051339024	0	1.40957053107184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122698849-4	7.17884382451733	0.634784066791481	0.858063156792229	0.739787114464334	0.459429178884277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.85774282263707
Merged-chr12-51679942-1	2.63395154976017	0	1.42148752752999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157838431-4	5.90127724213816	0	1.39448353772495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156540777-3	11.1181974172266	-0.503839690680343	0.600950783915243	-0.838404249009855	0.401803703889955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15248328572817	2.14512485062155
Merged-chr4-129036044-6	12.0943111575744	0	1.34738525791758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100721399-4	5.48198374103508	0	1.39561740809448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-61001894-4	14.3345077320484	-0.253059894339889	0.498472905484731	-0.507670309771011	0.611684573444058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14958237393725	3.45998168717325
Merged-chr3-95629969-3	7.42830455071084	0	1.37958675096365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21383683-2	4.43610940566305	0	1.39375858158405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154687035-3	4.78963473071612	0	1.35794298923297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43412959-3	5.12490743762118	0	1.3624018599873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32500287-4	4.08261616294199	0	1.3832745739554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59719569-4	7.06135607916751	0	1.3612405078919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10461700-7	13.1559246131139	-0.103928607039283	0.600820178976282	-0.172977890350426	0.862668806581299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62176953116098	4.34769206095547
Merged-chr13-92680240-2	4.45451413458285	0	1.40483963423115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122108278-2	4.92779955709309	0	1.39183904181149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77393677-2	2.618956070598	0	1.49487082924109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35096257-4	8.70454722269073	0	1.35234857567632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66785612-3	7.07587807607165	0	1.37570419542086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83921405-3	6.08668920027645	0	1.37967253865601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99154397-1	3.29138211486948	0	1.41231366313378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-76266860-3	6.86216711879975	-1.16816264746268	1.29303632324598	-0.90342601090291	0.36629984030086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.303163067301871
Merged-chr3-90574825-2	6.88147667531327	0.678511419011696	0.85732849846263	0.791425247414975	0.428695881762455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	2.39382085292795
Merged-chr3-65882252-3	6.0110692161916	0	1.35969415352318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120358086-3	5.02917167448452	0	1.36512202068764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81301334-4	4.26831493395436	0	1.41253218026279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75175189-6	10.9520858463756	0	1.35114145722866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96256730-4	10.146680052038	0	1.34963152812857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125283271-1	6.130967935086	-0.546430120431896	0.944798788662709	-0.578356076435414	0.563023742085477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76331258957479	1.5682414637086
Merged-chr5-43423224-4	5.29477986210213	0	1.36378248919587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95301533-1	3.45729277086682	0	1.38860392098579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155902108-4	12.8532756099729	0.751597744288099	0.637540271398415	1.17890238155388	0.238437049309556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27516951250108	4.07233267427758
Merged-chr2-129410507-5	14.8952377580195	-0.630394929131876	0.674458215208068	-0.934668619815685	0.349959103539576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65706852276151	2.59389907953812
Merged-chr1-52802938-4	14.1553366044992	-0.225532930834362	0.541262235664101	-0.416679598120577	0.676912779109869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14612127301446	2.33293138561026
Merged-chr3-152355467-1	4.12677544827468	-2.95310434274596	1.14567945513306	-2.57760085468494	0.00994888439280283	0.200553469406622	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51378799049974	0.41385117919798
Merged-chr7-55918958-1	9.88584538031048	0.880983623909998	0.688499698381991	1.27957009419228	0.200696373174905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46653724581267	4.13874573690912
Merged-chr9-109200559-1	3.16272578200936	0	1.37215646506651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81925134-3	3.53004913864409	0	1.40599153357563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8429169-3	4.87226393662606	1.72005115758271	1.28690972840766	1.3365748347485	0.181361457966985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr5-117884597-4	7.08434960169132	0	1.36320380401071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39646660-3	7.25871060047006	-0.991105181287296	1.14293564388282	-0.867157469969422	0.385855735490407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0.723581231604105
Merged-chr5-91957046-2	9.26821036684701	-2.44425789368727	0.695391244546621	-3.51493912650693	0.000439854800153164	0.0196144930939507	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40088322335667	2.00105898665567
Merged-chr11-107595016-2	4.195787881374	0	1.38428992341641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105749254-2	2.21846410828852	0	1.56898814671179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71757132-4	9.47712266304568	-0.536402492129502	1.19292159196288	-0.449654441451498	0.652959626292424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.600815099743027
Merged-chr14-60205228-8	22.8008598089451	-0.373593918037128	0.337561542401357	-1.10674313009546	0.268405002265952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03100184239549	4.59189823951836
Merged-chr10-20398390-3	5.70878627518282	0	1.40405271951788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43520105-6	11.9509475734354	-0.787096541477269	0.454167592907486	-1.73305307064831	0.0830862364721291	0.81304855596552	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20155138968866	2.82895605356466
Merged-chr4-126536657-2	3.55934247098993	0	1.40333042973202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12537406-2	3.42920866756579	0	1.40580048457217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137609922-5	16.5562314818637	1.84917082023398	0.473618795076857	3.90434425207703	9.44812138891645e-05	0.00558857922285211	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5699938365179	5.28658245174335
Merged-chr17-67450656-3	4.82701439595747	0	1.36772261190048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40809879-3	11.9374920587223	-0.275285456672407	0.505531262194083	-0.544546850530324	0.586065217748235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71843027597182	3.13412745900292
Merged-chr8-94954951-4	16.2217997711474	0.063006402216025	0.509203168048642	0.123735291077384	0.901524868128411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19200949418603	3.83524654653543
Merged-chr3-142526983-2	2.79721103814112	0	1.51282234373026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80639332-2	9.24170116390287	-0.234720016897798	0.553923924266959	-0.423740529366767	0.671755053880162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70839166142503	3.55333603142637
Merged-chr15-62469996-2	3.2109105526353	0	1.42608532630447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110868528-2	3.15666931660693	0	1.4772538583167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173802778-2	3.3222939373878	0	1.4527211378474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56884512-3	5.73621841539614	0	1.3907104582294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-46108328-1	2.66643763826427	0	1.44495435735763	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53115539-1	5.9731345613472	-0.426550396788843	1.01601265116159	-0.419827840038385	0.67461122545832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.578845274708	1.39949824061849
Merged-chrX-73798634-3	3.94435097890945	0	1.36717290810739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39527640-4	6.41205774094465	0	1.35070066383681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87757157-2	4.67022660729416	0.0956292386517304	1.40579642821121	0.0680249549171302	0.945765769141105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.601513806634888
Merged-chr10-95918953-1	2.02273540990991	0	1.44852501874653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-153623371-1	1.99293517002096	0	1.46582757573105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56338636-1	5.00408767929067	-1.04439239189037	0.93552126348203	-1.11637483043744	0.26426172265002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71118429411573	2.17884592431967
Merged-chr12-39038987-1	2.74694706324456	0	1.42580831595649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74434708-2	4.32334655650741	0	1.37650058190166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82914748-3	11.8994243534853	-0.502554746078841	0.606997831111798	-0.827934994690746	0.407707315157485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49690686312675	2.2784058024774
Merged-chr11-61950862-2	3.73216375192879	0	1.42271481995291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69071224-8	26.7679496863468	-0.769172367921113	0.416336536229354	-1.84747746351377	0.0646779714159084	0.698529686108734	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5506781059279	3.50833703723028
Merged-chr3-107274041-4	5.83258581057318	0	1.36435426161407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16056702-3	10.5518676872523	2.46340390983021	0.701792512997851	3.51015986093564	0.000447837363909265	0.019872645930403	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	4.03776288886512
Merged-chr2-132601985-3	5.95220140198742	0	1.38048820383552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70414169-2	7.08894571560591	4.09393327551291	1.13781946358668	3.59805171780755	0.000320609875223977	0.0153550944557711	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	3.32254024318198
Merged-chr8-83736148-2	6.28051252787412	-0.389160507551228	0.713210291314214	-0.545646231259692	0.585309138784987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88854826306555	2.15203663810895
Merged-chr18-39249194-2	3.74477541377286	0	1.37763861043103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96322771-2	4.30946635565409	0	1.41765416561614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122509308-4	5.42968668807337	0	1.37872933681736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146100173-1	3.52890613959261	0.732455058005328	1.14842004494542	0.637793689886473	0.523607987716429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	1.27992882773773
Merged-chr15-69078175-1	5.98053261216534	0.140517117200263	0.632988992204415	0.221989827518019	0.824321802244809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83216237702095	3.0863870456778
Merged-chr1-152542004-3	6.56322725493229	0	1.36183931380708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132514955-4	12.6815569640308	0.763152674638981	0.461260730797437	1.65449305281121	0.0980273737109682	0.899809187361453	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20613844154895	3.96436854576732
Merged-chr1-34510824-2	4.00741530854952	0	1.39884168958333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69431185-4	8.49789703628687	3.39159828377911	0.7984850717081	4.24754125524712	2.16129375255047e-05	0.00168076920021303	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	4.38250552942087
Merged-chr1-87824617-2	3.29820817276581	0	1.39811762796915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40832147-4	18.2305624633373	2.73569912294261	0.584595243433333	4.67964656516161	2.87369868681341e-06	0.000312689335064914	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3672819949028	4.85062269253831
Merged-chr18-5749354-4	8.33838005654305	-1.5479946458879	0.925595895393572	-1.67243032687573	0.0944394960832082	0.877994966236894	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54646549013652	0.815775955292901
Merged-chr3-142443538-8	19.0660522196614	-0.128402859587813	0.412406607380429	-0.311350151258286	0.755534445321751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3029686847933	4.10820158968165
Merged-chr15-51927628-4	7.84679200809731	0	1.3690926532684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18624461-3	5.13885350534408	0	1.40331063201787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96910212-3	5.00626478048107	0	1.38186764543672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63568143-3	4.36955517100491	0	1.39677816054666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84773101-1	3.777683089376	0	1.38956180365564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75413110-4	5.24336591833056	0	1.39308514617337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-130188618-2	3.71870014068293	0	1.39327699308629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78769804-1	2.30426276172348	0	1.44447441719866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53900184-2	8.46618308967856	0.785256075470102	0.633364589347812	1.2398168269538	0.2150431528939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53128134672186	3.06148226330426
Merged-chr13-101914904-2	2.68895103657086	0	1.42210610603442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117137343-2	2.89131396071819	0	1.50333637212462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50443920-4	9.8994244773247	0	1.3496216824947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63704885-2	5.27379208665465	0	1.4195101842279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53594547-2	5.71472909076487	0	1.35543674676878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86697033-4	6.97193770938329	0.121805749838575	0.613566307895077	0.19852092311986	0.842637516226767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64751895429196	3.17630586309225
Merged-chr18-65380370-4	14.9898313476565	-1.87244601640596	0.608272137856939	-3.0783031144628	0.00208183043389541	0.0643596738800724	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41532032691146	2.24626323229054
Merged-chr8-125950455-2	4.94279713918419	-1.32170297664065	1.04178208200596	-1.2686942878646	0.204550120549591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	0.723581231604105
Merged-chr16-73098965-4	15.3406354605003	0.227695411620455	0.55551488613438	0.409881746292889	0.681892696229955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24719972973917	3.45645073688097
Merged-chr2-103504615-2	7.77621102177736	-0.149737883004872	0.667926827173346	-0.224183064541006	0.822614860662298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53232159410961	3.31471503715536
Merged-chr5-32690071-1	2.01708169905848	0	1.43307147021897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36876079-1	1.64550505492189	0	1.51633599881902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54755582-1	4.31987854045282	0	1.38505873613242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86218742-1	1.66281505325217	0	1.61758369664947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77522597-3	7.11739069949693	0	1.37001015240152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83646890-1	1.05120100120833	0	1.67102750714992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-129645297-1	1.5605100979565	0	1.64560362686216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70958210-1	4.54143973048098	-1.1897686520554	0.775302105582745	-1.53458715446301	0.124885269968109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64745166377745	1.75191520103598
Merged-chr17-63871863-4	6.26815023622797	0	1.37150608004225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66980068-2	3.28025040289669	0	1.49377766366668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131085503-1	0.971654257729283	0	1.90617712236034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21994067-1	2.1995598289731	0	1.43912936029424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30262885-3	4.47959858860689	0	1.42064659799618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174453903-2	4.24969363311161	0	1.38336797338216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9000496-4	5.38169636063072	0	1.3718675031565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17912899-2	4.26142705804755	-0.598878968097336	1.05312508019276	-0.568668413050914	0.569581187677844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26857811924232	1.02674429890598
Merged-chrX-101927634-1	1.77918817889465	0	1.71936943237091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32009013-1	2.0232860309006	0	1.60441608349891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59761071-1	4.87196897221147	-0.0339414673522513	0.842430321146391	-0.0402899403075418	0.967861973740154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09032553771468	2.06861510361834
Merged-chr10-94357623-1	3.42843233130567	0	1.39431033312852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52905958-2	5.5743825301667	-0.0322394598990999	1.09180484078699	-0.0295285921940601	0.976443015606542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.662147012823607
Merged-chr12-77293154-2	2.55807207274499	0	1.59718379770545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62534027-1	0.989369849174265	0	1.76720978383461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6696491-1	2.31937129439188	0	1.462937080069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57756869-2	3.422339869611	0	1.45598071025484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-56575604-2	5.00600049056727	0	1.45538805732923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25970044-2	4.63678187234283	-1.01738534407922	1.14802816853491	-0.886202422522079	0.375508458481344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0.723581231604105
Merged-chr10-75105823-1	4.21181652004042	0	1.38951059542593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117981320-2	4.30977579504492	0	1.40526130213126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89393499-1	1.71986730137291	0	1.75161018869515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13524354-1	1.70900372815632	0	1.80312528950433	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13614710-2	3.64749019473536	0	1.48797462776805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88204466-1	2.24970441455667	0	1.41624356061077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69043623-1	2.7958195251475	0	1.42796153589507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29383527-1	2.98443143711899	-0.694684505740515	1.37983823319991	-0.503453585373923	0.614645405331347	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr4-12305421-1	2.44481036729362	0	1.43254227719603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22122246-3	4.54660904249045	0	1.37007683264194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128578449-1	3.51740923566591	0	1.41805948425666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69553234-1	5.51131810692391	-1.30579388422925	0.923183950123439	-1.41444604193417	0.157230979628242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56120239685585	1.57819216635836
Merged-chr2-165819688-3	5.41167642391153	0	1.37496156120143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60526399-4	10.3548034888242	0.0292209478216548	0.750476572298762	0.0389365223382644	0.968940998020833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00559090438206	2.02368165716525
Merged-chr5-104942979-6	20.1499903849755	0.0160245469946476	0.565785665394202	0.0283226457911102	0.977404819113801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07068206082046	3.69775570530891
Merged-chr6-134049170-6	18.7867537758421	-0.926087886516645	0.505032321328056	-1.83372003613821	0.066695562868262	0.711720475452661	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06766830513897	2.9507714216553
Merged-chr7-45708341-3	6.84018261238729	0	1.35923665335279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144197879-3	5.54663794030717	0	1.367537377115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67201972-5	15.2409416489648	0.335761809411781	0.539452875371162	0.622411752242057	0.533671154696211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82808357397756	3.87902426162706
Merged-chr10-84549277-3	6.77770556501104	0	1.37055406351541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75553321-4	5.46112953344747	0	1.36664342367912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39482319-4	7.21192470818246	0	1.35155984918248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-143119089-4	5.24788656731255	0	1.38671200973178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79114417-2	6.83658596836674	1.7081690197055	0.764971839430128	2.23298287813838	0.0255500734903804	0.380409225180011	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	3.45596361267061
Merged-chr14-62874547-2	6.50947243053161	-0.742414160684245	0.896181945022658	-0.828419011125554	0.40743324368179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1552264446993	1.44790810950236
Merged-chr13-17773284-2	4.3809408469262	0	1.40056364627817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128399701-2	3.92388433980457	0	1.37771183303109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70915338-2	4.10124547235078	0	1.37157366970165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41601884-2	6.09514968548814	0	1.39053797222766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27859497-3	6.51195425990084	0	1.35868154384457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37299021-4	12.0706893283512	0.871017123829653	0.611283789246667	1.42489812285563	0.154186652354153	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52863192190685	3.86799774529004
Merged-chr9-60758057-1	3.49679664232315	0	1.41345029277384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111044703-5	15.6177565905106	3.58311042049652	0.700425546141624	5.1156192692207	3.12713271739671e-07	4.59426506445859e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	4.84203908437601
Merged-chr16-91538702-3	7.25895949522974	1.48013148699634	0.738626150959033	2.0038980275401	0.0450809848961363	0.550538501234779	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	3.08757481493246
Merged-chr11-19919589-3	13.3257547981348	0.031388171906828	0.554533919864645	0.0566027988233604	0.954861604982938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21287904171808	3.26293122066877
Merged-chr2-159992444-2	8.15533415290995	0.000907028844834388	0.721534307460705	0.00125708346152866	0.998996992778574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5646301976401	2.75285173785198
Merged-chr18-50003934-1	7.30267820001571	-0.267723030005504	0.653047426728111	-0.409959551248591	0.681835619511247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27536759916832	2.92218024130493
Merged-chr8-41010993-4	11.2283059467168	1.39625451371108	0.589918165007052	2.36686136575298	0.0179396513284255	0.299021211484178	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75395548195819	3.89729790924719
Merged-chr8-66323210-4	5.36644615755121	0	1.35718632495208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72261284-8	20.6294520905758	0.380680323687149	0.340558277226367	1.11781257172062	0.263647051070599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54762291578975	4.97772797041595
Merged-chr19-11559830-7	20.8114172127145	-0.225252033644304	0.457203420918422	-0.492673552599019	0.622243267794703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83928948763501	4.63457682600343
Merged-chr18-38246238-1	3.02020892180162	0	1.41758339477903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96946764-1	4.45647824780731	-1.10501038778796	1.01539147051963	-1.08826045901535	0.276480141070118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35915318132375	1.20027794713453
Merged-chr6-114908169-3	4.46650886496638	0	1.38017934755458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84318795-2	4.69727983050255	0	1.38730653662207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33913088-2	6.93933405255413	-1.57803173990376	0.803708141526783	-1.9634387887449	0.0495952104398047	0.586457699433836	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81284203275462	1.18984215491549
Merged-chr8-110395917-2	4.41017512657591	0	1.39806878031959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-123095514-5	9.70383505237047	0	1.34391138366395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41085373-5	14.0047586616092	0.00381642301801447	0.54523023985675	0.00699965397923852	0.994415129764305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7239411649679	3.67261086069499
Merged-chr9-14523839-4	4.33553219795784	0	1.37900273123326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51535498-4	6.97697950324832	0	1.36919597817839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118947343-4	6.94197884586231	0	1.35304690036106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9060261-3	4.80136139797815	0	1.37449486998625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10835800-2	4.03119900034606	0	1.37542553744681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3715441-8	16.5096837340634	0.757973684451939	0.478251483265431	1.58488517228761	0.112992426040018	0.980704979579963	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75419851948463	4.41626079559622
Merged-chr15-83037899-4	5.62020421684108	0	1.35543695928683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116166495-4	12.3071163333857	-0.366986418229011	0.960075591216356	-0.38224742050161	0.702277851048034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.662147012823607
Merged-chr8-56304324-3	8.22006399648814	0	1.38628989517833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76196781-4	6.93019426988044	0	1.35736087084073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43924136-3	10.6105611723436	0.144738919753355	0.667310928283123	0.216898770301489	0.828287235951416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30218944138379	2.53640382118252
Merged-chr19-32985222-2	3.55849952603012	0	1.43154017455678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124704102-2	3.66408986435664	0	1.42417805346975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5566235-3	5.44700682232085	0	1.36090632740116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125584294-2	5.19171240607291	-0.52376027783584	1.09013574835175	-0.480454180708913	0.630904476212171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03951848988522	1.86575916392988
Merged-chr6-119483151-2	5.2781897762247	0.298605459275063	1.08206365923808	0.275959234676934	0.782579376876017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.06702908365212
Merged-chr14-45666100-2	7.60133367289516	-0.778008037961318	0.846443802190565	-0.919149075163481	0.358017603281975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46976107568881	2.11005512232597
Merged-chr15-83113031-2	5.61126367740382	0	1.35408958338831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32442250-2	2.26904438290223	0	1.46158829087885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3847131-2	3.57851671234113	0	1.4737110281089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53721209-1	3.41915951339123	1.78143319447563	1.45815201195355	1.22170609090953	0.221818792112888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr13-51388325-1	2.24724185869543	0	1.4256603700335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56429287-3	7.50149061543139	-1.14529233618917	0.673408769074433	-1.70073867283214	0.0889920697349176	0.845424662481718	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44846862147826	1.92822012848219
Merged-chr13-5870985-4	13.2467842229304	0	1.34846864871147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106663969-2	8.77989805701255	0.553271927720811	0.696228875740168	0.794669607939806	0.426805715793824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97610527019784	3.51798472664992
Merged-chr4-141573574-13	43.5854829929052	0.620922025920059	0.415883178815686	1.49302029403609	0.135431874754367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3761079026915	4.96651209718079
Merged-chr6-145710081-4	16.9898352505738	-0.778689952183722	0.564010002592629	-1.38063145796042	0.167392305787591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44237115780607	2.86523152519899
Merged-chr15-76825748-2	5.26498539923516	0	1.38458762007547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140688525-5	11.0958540564935	1.55264326092579	0.738553252521171	2.10227665456158	0.0355290483721894	0.472668512105688	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	3.06325086962784
Merged-chr14-47393762-5	11.7339220345786	-2.76527742421902	0.743893648339515	-3.71730210412677	0.000201361604114351	0.0104644507055946	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04388944243468	0.730937814817307
Merged-chr19-44373154-4	6.27949856553231	-2.20770897825369	1.19751529951241	-1.84357475779442	0.0652451375279909	0.702448094847308	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr9-40666396-4	16.513031846902	0.9633751896701	0.559726792692321	1.72115253771613	0.0852231478034309	0.823581349590525	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83045305892928	3.62799899290269
Merged-chr19-40737298-5	16.3345487117927	0.562002401933705	0.515828479812576	1.0895140999929	0.275927240444873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63911079175912	5.29714601231115
Merged-chr7-125482490-5	18.1094178151383	-0.564194148100583	0.601081035564323	-0.938632421784679	0.347919500652248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71759971566554	3.29296620811231
Merged-chrX-162915868-3	4.26069270488141	0	1.37403223697481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94354278-6	13.6784532131708	0	1.35894073268461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52956635-3	4.35475059400924	0	1.36354692701367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85729579-3	5.090958468563	0	1.36005624722861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120002250-3	11.0022688482203	-0.69619221491503	0.592302911023911	-1.17539894192234	0.239835146611439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61309561208084	2.50773376845066
Merged-chr9-113729172-2	4.39415048270185	0	1.36148831800043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88719603-3	6.90311914267069	0	1.37443534219302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19587833-2	4.45499540014782	1.23217581801619	1.34690706901456	0.914818732756145	0.360286798864477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr10-44630642-2	5.27523086493438	0	1.3790204151582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27209216-2	4.56904944636852	0	1.43681776812013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30718328-2	4.06769606653176	0	1.38687147660002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82526291-3	5.02581102630138	0	1.42659209331085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37702969-1	4.04337242164467	0	1.38815714758537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-5445940-1	2.59559340212476	0	1.46778274499238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4491484-1	2.57492038337917	0	1.40826495828112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16977561-3	3.65566407000954	0	1.40950392730224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172515462-7	23.0802015393234	0.0154768095611532	0.362210151741712	0.0427288122288453	0.96591771170082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67882291157156	4.72138373118278
Merged-chr12-4539686-3	6.63817297725695	0	1.37045608495638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50312809-4	5.69229805671659	0	1.36531265313329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26827660-3	6.36786728858188	0	1.37447122345186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57017573-3	5.89563647782849	0	1.3817734715807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77566839-4	6.44540384486541	0	1.40038367474676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82899763-4	62.854859040663	1.10877427606775	0.296675239739576	3.73733337854903	0.000185982257696029	0.00976793192859755	C57BL6J_F1_Control-BALBCJ_F1_Control	6.03178317260556	7.14073153967878
Merged-chr13-45693674-4	7.48737204880418	0	1.38368328857031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91328704-6	17.5225351445132	0.181546144757936	0.389569707946092	0.466017097979953	0.641203262050769	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90181832016649	5.09560046384296
Merged-chr17-24159090-4	9.52384600200568	0.0497445795720713	0.664311550587489	0.074881400945203	0.940309074900077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8460126076219	2.37132011681132
Merged-chr13-106829793-2	3.7864640750853	0	1.45484130004787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166305000-10	24.5094578534145	0.380412792607239	0.376634927871504	1.01003057458607	0.312480641917369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29219306312538	4.67941170878982
Merged-chr5-20816056-2	4.35840852480699	0	1.39910930339914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118905616-4	11.184513482316	2.65633428094067	0.922002535801269	2.88104878001467	0.0039635429335144	0.104386739497533	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.57779343944977
Merged-chr9-40482525-6	17.9174760696612	-2.88741938708287	0.902304108975806	-3.20005124476308	0.00137403155179478	0.0462065020961246	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56564196299717	0.67591700901439
Merged-chr2-120309412-3	6.59975942839285	0	1.36870921514833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93345996-4	12.0526707915526	0	1.36550632751159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-33901071-1	1.47458604440918	0	1.6266326425296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115583432-2	2.72968912351776	0	1.41797954759364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37495776-1	6.65492562723497	0	1.35492781761897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-56902983-2	3.61932786898756	-0.506815202348327	0.96590802422856	-0.52470337717	0.59978940925386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18210741161866	2.11667041872131
Merged-chr4-139708597-1	3.53772291817576	1.27439714274504	1.32664599870433	0.96061582667093	0.336745367958389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	2.08990416182602
Merged-chr11-19027414-2	5.43123962230924	0	1.38240042251816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-49209556-1	3.74846540391115	0	1.41208064793486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21488756-1	3.2417499241563	0	1.41791783228104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65960114-2	4.38271174310653	0	1.40680907489839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79016879-3	12.6282997920973	-1.54735654083341	0.597705828065617	-2.58882625562007	0.009630367113165	0.195992933696943	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4604586112013	2.30145200835309
Merged-chr13-81055741-1	3.49582005331353	0	1.42342084631551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87849122-3	3.82865983934375	0	1.39202597307199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90236894-1	3.08547323259619	0	1.37996982864606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-164066405-3	4.62585459357633	0	1.3776790879357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113434843-2	3.11396713571411	0	1.47353002432543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80454171-2	4.88266645576623	-0.962916124024757	0.972886109394997	-0.989752155700486	0.322295275394289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06415190125929	1.23107802440432
Merged-chr17-67318020-1	2.6256928266453	0	1.46199977396852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90570012-1	2.61691467878858	-1.91052303057404	1.34823644441855	-1.41705339481309	0.156467317033028	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr16-95955469-1	3.08247808548422	0	1.42222852232895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110563476-1	5.20483941752599	-0.530925667987225	0.780230993113964	-0.680472414801491	0.496205382607804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46967715556574	2.31888779005641
Merged-chr18-9820677-1	2.03271965398464	0	1.49208429208758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25123779-1	1.86328044846668	0	1.55633501653791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-38012740-3	5.56413588409946	0	1.36226982877851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-36836125-1	2.22102465650006	0	1.41906858574308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46547466-1	3.23827100344334	0	1.40390292103987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119715388-1	2.18821511580595	0.615882204009869	1.45412201409131	0.42354231491003	0.67189963231734	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr8-25110198-2	3.34781311240745	0	1.38665556675168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167716133-2	5.67712980266201	0	1.36524161626882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134867502-1	3.4532273103772	-1.87697439824072	1.08404271991787	-1.73145796171476	0.0833701164633044	0.81450685852422	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92435819090246	1.08918047352118
Merged-chr13-105205288-1	3.99271398225113	2.22943824757736	1.07846554525251	2.06723177888391	0.0387123190830962	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84022605426951	3.94328575441708
Merged-chr19-35125867-1	2.41557961931058	0	1.4277180935963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95330861-1	2.68734722737361	0	1.43213844773365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55718861-3	7.57579569705522	0	1.35838856697702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76779325-1	1.44823864998501	0	1.57852704995559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68127068-1	3.23998747145883	-0.0288500481791046	1.4252674563395	-0.0202418486795453	0.983850444296818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr3-20026133-2	3.71843559061417	0	1.41114187148041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96692744-7	16.7045631632814	0.390039259553162	0.423321553393728	0.921378220471541	0.356852995611239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5539080392558	4.86880689831105
Merged-chr2-122156192-9	32.5707643248457	-0.123666272582301	0.337909669074016	-0.365974353208617	0.714384213149206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75582410271265	4.56790821123693
Merged-chr7-129301671-3	5.3922853180299	0	1.36846839850694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30123460-2	5.20061317978515	0	1.39486110623924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133201321-2	13.8499119973196	0.36839918437546	0.512785283090568	0.718427764063568	0.472493572905275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13424513608153	4.54563654454099
Merged-chr11-85715244-2	4.39170148205906	0	1.37455900059725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50545833-3	6.33023647485473	0	1.35330274400868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74958359-3	8.62192269635108	1.85035325339686	0.867413714735597	2.133184225662	0.0329096166183083	0.449816312512892	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	3.20425163552771
Merged-chr9-32676285-2	3.76554058889438	0	1.37748593677775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157445135-2	6.99729781210687	0	1.36896715776841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12567169-3	4.96439586065814	0.958413713118058	1.04447115364816	0.917606685230594	0.358824816677004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.36707655402198
Merged-chr16-89909639-3	4.40354571953998	0	1.37023647436156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182255239-4	6.85332773487548	0	1.35508050313352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144000314-3	12.0794970041688	0	1.36767233565281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153083495-3	8.79814867550688	1.92281358088638	0.69805100771993	2.75454595670156	0.00587736351644942	0.138486173988155	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04585323093051	3.74583424074005
Merged-chr12-21208353-6	19.3188375748547	-1.23027392621687	0.351416458772613	-3.50090013004464	0.000463689574629836	0.0203435848162254	C57BL6J_F1_Control-BALBCJ_F1_Control	5.35818887014665	4.26346474187787
Merged-chr2-12115720-3	5.81261347409453	0	1.3875924434611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94995686-1	4.22689710438941	0	1.38253349136454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99488820-2	6.18922924080831	1.17315754224926	1.13282870658459	1.0356001180322	0.300388736900233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.44075340970692
Merged-chr13-75845383-2	3.78685446239091	2.11782253358331	1.21997513812849	1.73595548580783	0.0825717057378226	0.809788814860932	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.39949824061849
Merged-chr19-12000871-1	2.89284931300083	0	1.42007705779693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20784943-3	12.5843816490333	-2.40718017743596	0.510560212839694	-4.71478214890153	2.41969495336591e-06	0.000269533192561511	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97154654357944	2.75280479844969
Merged-chr16-27296714-3	4.7301189422087	0	1.37347472982219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-88472159-3	6.8046106014736	0	1.3623928316129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99804413-3	4.18682621868509	0	1.37867722151818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51328659-3	4.21907952509442	0	1.38636817102292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34262980-3	9.04514839875916	-1.30271240902001	0.659209346083909	-1.97617405875521	0.0481350668977243	0.575250701881921	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23762319141631	2.14808222367982
Merged-chr5-64385117-3	4.65793094445615	0	1.36832629053641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76745323-4	9.59518505917168	0	1.34892071326008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39228794-3	7.13824955625515	0	1.37435173804775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171759476-1	3.10193167902613	-1.50473461231828	1.36890215820601	-1.09922729195656	0.271668937240887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04181016172925	0.67591700901439
Merged-chr5-107921585-3	4.30359355926549	0	1.37967226107348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99386753-3	3.27861304771633	0	1.37854664219684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102094323-4	5.78989922044454	0	1.35790479326835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99965272-3	5.96566364312303	-3.472204354459	1.16298287550466	-2.98560230558193	0.00283020450226801	0.0809721508098878	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62559269623071	0
Merged-chr10-21945005-3	5.04176357918525	0	1.36164437640658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24178907-4	4.84730617807783	0	1.38070788254821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63612336-7	14.2398962118297	-0.675947744280239	0.533213204884066	-1.26768755553833	0.204909550609661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46797480972182	3.12425274897972
Merged-chr5-99582238-8	17.8783284183109	-0.244936567783417	0.507089217671331	-0.483024602471774	0.629078267618877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55788994719315	3.37920258332124
Merged-chr10-78457140-2	3.45142415125773	0	1.41953548003066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88034569-1	2.30238060282391	0	1.42248406485528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16999852-2	3.14635533118805	0	1.38934224691932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31942715-2	5.08356150245891	-3.77536142693429	1.21339399831073	-3.11140604963457	0.00186198712732878	0.0589835421063318	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80505237968249	0
Merged-chr13-115210799-2	3.3596297078385	0	1.39074388287533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71093286-2	4.14759045475658	0	1.39339334803493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100853592-4	6.4048585863571	0	1.35204835913398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58068731-1	1.638854068272	0	1.68671616848798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134997084-2	3.37644523885204	0	1.41456357881088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92219977-2	2.54812122875481	0	1.49864306407488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39686002-2	3.095918771954	0	1.38942285294767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88771277-1	3.70012867800089	0	1.46191714246492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35829904-4	6.33245279740031	0.943018442941641	0.902166890116321	1.04528159176852	0.295892842977898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	1.7296346423299
Merged-chr11-71863343-1	2.82483867780538	0	1.42512705608314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41288970-3	4.87947956640574	0	1.37022547822339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19697193-2	3.95022482842777	0	1.37205885589907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172305828-3	10.3009438217808	0.23369511339357	0.61716474778625	0.378659206041542	0.704940950203502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12007346682594	3.60181922709349
Merged-chr3-60438886-4	7.34853126584235	0	1.36326924659662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78682421-4	15.1323278814489	-0.676065982120687	0.49141572249288	-1.37575163181817	0.168898540795852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83922554053008	3.90535794678098
Merged-chr12-35833115-3	16.9076685664834	-0.597489162830771	0.517132152821493	-1.15538969984915	0.247930877974424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56641439136057	3.08722445161716
Merged-chr7-118797001-6	14.3518082963572	-0.522576739983884	0.536459031539249	-0.974122363984567	0.329995786547574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17227079725666	3.53058993804451
Merged-chr7-102241874-4	6.62716237705511	1.21557030845528	0.768429960113046	1.58188822866362	0.113675088643864	0.984398824966051	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74374772464511	2.94043779836448
Merged-chr10-39321761-4	9.49747726217708	0	1.40156682343291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123895354-3	11.1649418691163	1.4654929619361	0.533652372116099	2.74615655904416	0.00602979815142822	0.141098191050649	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37807365746458	4.86748134760506
Merged-chr18-39145382-4	11.4764115160999	-0.411023078498811	0.736323013753217	-0.558210283831449	0.576700799317595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74093985836368	3.01187291907992
Merged-chr2-12085688-4	5.22273855129278	0	1.38378905341401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134073423-2	7.95961512495452	0	1.39887627805925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86187992-3	4.82849285788762	0	1.40077637486397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89084832-6	18.5600034934043	0.154841537268832	0.408088485538226	0.379431282077494	0.704367624476093	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61852950606425	4.73407537708549
Merged-chr12-103339801-2	4.80230575461355	0	1.41116557091411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164066890-2	3.96302224925539	0	1.36953101330078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152556641-1	3.28089240113828	0	1.4179489997208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62165257-3	6.80529155034155	0	1.3892964373422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23629924-1	6.07411128621042	-1.1800049708873	1.03641180003426	-1.13854837512298	0.254891571131449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17890037399384	1.58383754133375
Merged-chr9-48548449-3	7.06852079658621	0.114320312426363	0.799826098989571	0.142931460439695	0.886344311820276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95880986522228	1.98022358911587
Merged-chr10-75151492-3	6.04330413000511	0	1.36197046363167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58588173-1	3.81834140672643	-1.34200044288807	1.09064830188426	-1.23046122253119	0.218524439452004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	0.730937814817307
Merged-chr9-83564398-6	16.0841665021748	-0.304020995573101	0.417731857332803	-0.72778982554565	0.466742253729207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4519244140027	4.0943776438888
Merged-chr10-61122528-3	6.89652528677083	0	1.37215452295252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87597638-1	2.26810942825076	0	1.41744489790681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119876835-3	4.6356370711149	0	1.37327671985481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109985630-3	4.89041279976468	0	1.39924659761494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-118498512-4	5.27822578004338	0	1.36706593217033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8589864-2	3.96985104046665	0	1.37700010363313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64223301-2	4.56764147058602	0	1.36921512657979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103807533-1	3.49115099460966	0	1.39169486762542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44780971-2	5.87758856980964	-1.80549245649207	1.06345146305595	-1.69776667691424	0.0895518075841679	0.848517815664595	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	0.67591700901439
Merged-chr19-61021737-3	4.70436467042399	-3.58225763954906	1.26679544577833	-2.82781063942655	0.00468675201150623	0.117621030744906	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32267539517565	0
Merged-chr9-105034624-4	10.3242666918321	-2.40940777748817	0.642432860847256	-3.75044292458917	0.000176522483071463	0.00936154698271381	C57BL6J_F1_Control-BALBCJ_F1_Control	4.81359762389901	2.09070350854821
Merged-chr5-105515482-5	13.0277122197807	-0.293868225788096	0.521073490705411	-0.563966947138815	0.572776626805799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17960475687035	3.31659084715502
Merged-chr3-153293060-1	2.88115524373141	0	1.38987168082401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97761339-3	4.99200715125932	0	1.37776382157148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38433708-3	6.48951144228805	0	1.38127215679088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126181319-2	4.68871471878476	2.01297985087829	1.16683277853801	1.72516566889771	0.0844976207361562	0.820192723916572	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.30064958020929
Merged-chr3-126744895-2	6.24700554661288	0.238220876565325	0.880876243520519	0.270436259710273	0.78682464773814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	1.8911864326233
Merged-chr18-35058511-2	8.14448576056728	0.99962495419478	0.760807584561736	1.31389982760308	0.188879916744198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55251396238028	3.69698697320158
Merged-chr2-174069818-4	8.32675569916893	-1.84585083213993	1.26698246931241	-1.45688742887	0.145147456704725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr15-80458228-4	5.68458586803781	0	1.36023572736173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122740948-9	24.5052618064607	-0.546994228276676	0.404665827449746	-1.35171835913079	0.176465429665359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29844691818226	3.85009206613594
Merged-chr4-119883063-4	5.17738769969466	0	1.37324618019306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60956398-2	6.7573090843579	-0.879483008244109	0.921700782425697	-0.954195792184878	0.339984544201592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	1.17858215524007
Merged-chr2-93162152-3	4.84316395081955	0	1.38961727624492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43180616-4	10.9827145489958	-0.0213007391900071	0.724140204331562	-0.0294152141568626	0.97653343891285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	1.93957782847288
Merged-chr11-86956570-4	5.14577536043301	0	1.36741252905768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102582312-1	2.00557529891729	0	1.66808590885333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3460954-1	4.24876470036138	3.96944734893579	1.20804789194706	3.28583607934455	0.00101680163272343	0.0363394608502385	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.8754439179929
Merged-chr9-108344201-1	3.49670314335188	0	1.44758917161251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-14484754-2	3.90509660061822	0	1.47830479691223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105687340-1	5.01402043757933	-0.0134593510656649	0.926097792859893	-0.014533401514867	0.988404431518973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87382227705425	3.45373046944783
Merged-chrX-71285738-4	14.8574797599798	0	1.34015486155464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-46141173-1	2.08256723954874	0	1.43121164370226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36497941-2	2.29188320326561	0.642371932243604	1.49742125747619	0.42898545017738	0.667933813206216	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.601513806634888
Merged-chr15-38404113-1	2.82822825204197	0	1.3859919112413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4910048-1	1.89351844965875	-2.53173828209349	1.3539521038288	-1.86988762374537	0.0614994248096873	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr5-95914850-3	4.77096630566229	0	1.39133829575812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48356021-2	2.23548750085565	0	1.60229828469776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10733316-1	3.34167868413786	0	1.37980065207849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120433952-1	1.88208887160532	0	1.5794371807894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80646827-2	4.11101495272312	0	1.4007249494989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35325474-1	5.46927218825767	-0.762567642288644	0.806375752754525	-0.945672832651235	0.344315483283521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	1.80179175376942
Merged-chr7-47034092-1	2.20890473849304	0	1.44020195132726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12144834-2	4.56174552869562	-0.0354233142583508	1.02330148089761	-0.0346166940238166	0.972385389571781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.18909650862134
Merged-chr2-23027508-1	1.54099459227995	0	1.82059312400673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127650251-4	12.2529500664361	0.0455634787902457	0.619771387442889	0.0735165896867807	0.941395043135111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77956094982157	2.66945035843123
Merged-chr9-31353977-1	1.27432801903545	0	1.78514889945914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125275420-1	2.0935938356349	0	1.42915118050507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41772716-1	5.95576931693701	0.542874906349614	0.629690389114502	0.862129890711891	0.388616044523306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58417074372833	4.23072245682091
Merged-chr7-30273446-2	4.37432851143992	-1.85352154454786	1.07666256497557	-1.72154359670703	0.0851522281569747	0.823481581637607	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40617353414439	0.94927122251658
Merged-chr10-80666228-1	2.93654956347103	0	1.51630942311375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25607871-1	2.47322058041685	0	1.44112053137262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131095044-2	3.02634139356884	0	1.41268218371708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54857222-2	3.83605450612923	-1.23825522188717	1.28892051885092	-0.960691682518237	0.336707214529896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6322505509536	1.43811874863432
Merged-chr4-148921107-2	3.66632404479932	0.12385505267713	0.964767327154435	0.12837815833009	0.897849715246518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13691092425662	2.27783025487179
Merged-chr3-52512958-1	3.960759644785	0	1.41844095029375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141474381-2	7.52854442010438	1.18993436587169	0.958005153380665	1.24209599674133	0.214201145425921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	1.07036642516009
Merged-chr19-53428056-1	1.44537304176903	0	1.55781475729616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94812467-2	3.13233520089277	0	1.47185357241805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115696068-4	12.7033247020495	-0.334293519451967	0.595167035690726	-0.561680166079762	0.574333950080869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71983267057957	2.6853628689984
Merged-chr17-3273924-4	10.7484284253501	1.2318291371001	0.640889207964189	1.9220625371631	0.0545978892512777	0.626532966394386	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66722862650681	3.7757289446291
Merged-chr10-68301163-4	7.62452997989506	0	1.3878140666527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74308799-4	7.6370071401507	0	1.36463510640756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122789153-4	11.1612530089688	-0.218761260808527	0.555894162991012	-0.393530415270908	0.693927764203986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27028269168757	2.91688136005783
Merged-chr15-87074425-8	18.7793479184536	0.172008823354012	0.395934616252931	0.434437445712324	0.663970810696928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33737881679496	4.29120670605797
Merged-chr2-73554605-4	5.78221864216194	0	1.37080770833499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137404452-2	4.37701963301386	0	1.407844040642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36079847-2	3.83926971436794	0	1.40514679211951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128450464-2	9.59733604005303	0.307892472910422	0.541422958913883	0.568672731440993	0.569578256517978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29398433573242	3.4673537197748
Merged-chr12-98280710-4	5.1012107749108	0	1.36277593659744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28756581-4	5.75340771522887	0	1.36752486304936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72236495-3	5.20462821669336	0	1.37179354834077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135510444-3	4.32800215668409	0	1.38878429210707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118700225-2	8.85736422219712	-0.339321216910931	0.72590683943975	-0.467444578939106	0.640181834644408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02889460529794	2.38790687071332
Merged-chr1-14577130-4	7.02116866076573	0	1.35243505389514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38180177-3	5.86817293527137	0	1.37702503891066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152697627-3	4.56893393843058	0	1.38763513598016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127560717-3	6.31798141826687	0.706274927298298	0.881300795947829	0.801400532650952	0.422899806887484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	2.00425570563599
Merged-chr6-43640775-4	6.90847218928392	0	1.35265042691823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7833619-2	3.37849263402704	0	1.4091317654147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64901250-3	7.52074827073392	-0.873871396280947	0.91620355576135	-0.95379611963498	0.340186853982474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53823966306787	0.88866493597531
Merged-chr9-124080694-3	5.18982529934295	0	1.40364013932095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90900395-6	14.5337193683035	0.326808227767045	0.475564802629821	0.687200200603223	0.491956577973807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38751761867622	4.0601441191835
Merged-chr10-13103998-3	6.57923958091981	0	1.39084028456206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34172960-5	10.2375388714128	0	1.35720187524803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86296294-4	14.1632831838932	0.456079757659615	0.571606575291629	0.797891027455251	0.424933730686251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73690813973276	2.82190765848373
Merged-chr10-8505031-4	5.29664832582274	0	1.36606064683694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85285375-1	4.28614980603682	-1.50951335153486	1.08546830514942	-1.39065631338454	0.164329671075956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56343534314907	0.878778741524029
Merged-chr1-46970627-1	4.70754758756306	0.393231769244292	0.951549895982595	0.413253966927536	0.679420552520299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.338064021838
Merged-chr3-14871601-1	4.37332086984587	-0.553950904078559	0.953520636902352	-0.580953240695605	0.561271968276358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31996877971892	1.23107802440432
Merged-chr2-128468971-1	2.7373485515391	0	1.46700505696098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30591576-3	5.82160375332011	0	1.36226550028982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58556854-3	9.52801365603183	2.91228188381748	0.779068188684832	3.73816044104405	0.000185371641517734	0.00975434422922528	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	3.8021567728245
Merged-chr4-129767708-2	6.2843367078691	3.62051044637625	1.08693181523495	3.33094532299953	0.000865516010287765	0.032115074951012	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	3.63335314615132
Merged-chr4-109420961-3	5.12127251352139	0	1.3653816476726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65371115-3	4.3822761016259	0	1.36999134576666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102140769-2	4.03024948175004	0	1.37271936072999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91505639-1	4.01678910887301	0.621299516033633	1.39959190440753	0.443914768352879	0.657104206739245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr4-154940736-3	7.93148601338068	0.585789383094686	0.67757153899969	0.864542486479726	0.387289951359891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84022605426951	2.32834156555516
Merged-chr8-40311360-4	18.0772165471378	0.423285720594192	0.445458551602998	0.950224704567874	0.341998088342647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89401946897091	4.28747807151526
Merged-chr16-57571319-2	7.49741798879858	-0.389500289912661	0.891258261803609	-0.437022922092686	0.662094724489125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	0.94927122251658
Merged-chr11-32342947-3	5.22151598510345	0	1.37276350101425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-127148065-3	6.39736310630914	-0.424848457108142	1.1257106496309	-0.377404670771697	0.705872896319905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0.879366456215217
Merged-chr14-63102256-3	3.93339232366079	0	1.41579579931462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33884349-4	6.21450614505711	0	1.36943629292361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-31228085-1	1.76200697760214	0	1.64259058489814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162587752-3	8.68704805177249	0.62132805934071	0.625814416635004	0.992831169792449	0.320792237224895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32847794617102	3.88875917000399
Merged-chr12-81927967-2	5.01386043197584	0	1.38079023116205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95637357-3	4.96559562205697	0	1.37588218823178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170932346-1	2.49957901250175	0	1.47733589452959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25694865-2	5.89003142485471	0	1.38553851935583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171665783-1	6.79416818139547	3.17551354391519	1.08720349484033	2.92080880808938	0.00349124007150418	0.0954629371463259	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.4194666232107
Merged-chr6-127338590-2	3.44856328731798	0	1.42367772201851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112956021-4	5.36450647071341	0	1.36427007210414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110062921-2	4.45152506412566	-1.45598626669571	0.87929428970622	-1.65585775290564	0.0977506288650871	0.898027114158741	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83995505205827	0.88866493597531
Merged-chr1-151339010-2	2.87162676894156	0	1.44131924424674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38086080-2	8.79674922783752	-0.230838315439419	0.686889147812957	-0.336063418929247	0.736823043200953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11974716943976	2.47248699649389
Merged-chr6-73241014-2	6.10377192165481	-0.691885028817475	1.40604434789464	-0.492079093986955	0.622663430701743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr4-3646143-4	7.21485427468462	0	1.36862390276007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40756568-6	15.5202499943484	0.0218513616052668	0.508954266316498	0.0429338411158505	0.965754272303054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89080895314823	3.85512969509478
Merged-chr11-79210118-3	5.19992963691545	0	1.37205981804165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82612206-4	6.173419666918	0	1.35536664539227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-130954345-2	4.52979472939271	-4.3586049342102	1.08256226660294	-4.02619329037526	5.66870965278791e-05	0.00368594961741505	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17198420640041	0
Merged-chr2-104685633-8	13.1570012139356	-0.194670883055641	0.455748643612257	-0.427145282348364	0.669273512702224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89309051625739	3.56656220108616
Merged-chr19-33120195-4	9.62608868900744	0	1.38045129604489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70738417-6	19.4722617744463	0.032759212831199	0.427202593425133	0.0766830851108586	0.938875661040228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04093574419459	4.14272000367789
Merged-chr2-34784274-2	6.72619910828274	0	1.43379609892602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12233029-5	14.9853580718896	0.389506753367362	0.5527592253666	0.704658982595965	0.481022482985352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95457920084811	4.51027756367301
Merged-chr11-82088190-3	6.89821697876864	0	1.36346047762514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122940515-4	6.77078019945221	0	1.35801758750474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-163383793-2	3.43460834611119	0	1.43617309161536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119342071-2	3.93367052554765	0	1.39884926114074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139147822-1	4.37684745154315	1.39433317366431	0.896328625433173	1.55560486868359	0.11980208028213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.65187883000891
Merged-chr10-68673683-3	4.44504509595656	0	1.35992830133288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186508575-1	3.74481118384511	0	1.40694659648303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-136321552-3	6.30738144806561	0	1.41400842431373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165456646-1	4.8023815198096	0.286208785965558	1.05988660152979	0.270037177139948	0.787131652432291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.897114879832661
Merged-chr6-37430658-3	3.69157146167818	0	1.39793780888837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58611942-3	6.30782890160506	0	1.36992194694893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90134071-3	10.5671982110771	-0.466169978807957	0.567694924346857	-0.821162844364503	0.411553517425285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62814759721134	3.2092890203059
Merged-chr4-3812664-6	18.6771661654019	-0.339100279944711	0.438999527180074	-0.772438827264646	0.439854564881799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04258687812239	4.73932775026266
Merged-chr3-13583874-2	3.58255126177371	0	1.39077732842947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101160226-3	11.2967524326207	0.938431663432579	0.492935137916403	1.90376297254696	0.0569410608954515	0.644711337058082	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54318759211267	4.52605265845367
Merged-chr7-28807048-3	4.65184984550913	0	1.36974013516707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43218166-3	5.88977276733603	0	1.36485077914664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62441462-2	3.96888076380403	0	1.4200572298489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34963626-4	13.347105572353	2.11492691972825	0.584034562833262	3.62123588965068	0.000293199025199474	0.0143585637935299	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47126464988938	4.36171887710058
Merged-chr10-93948710-2	11.3812698600098	2.47110168051675	1.02134717179819	2.41945319745305	0.0155438608626328	0.273623294246067	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	3.06278702142627
Merged-chr10-99169102-3	8.67115258054461	0	1.35219039647116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78679651-3	9.52785234321557	-1.39367791829367	0.628907896325816	-2.21602865290094	0.0266895398702227	0.39285586184821	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1289509627862	2.79840474846788
Merged-chr8-104344180-5	11.286961674795	0	1.34106574781432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157076396-5	16.3622174040638	0.78625400541504	0.387448715291567	2.0293111691527	0.0424266063990017	0.527243597331219	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16336594883537	4.98555353800492
Merged-chr3-126822470-1	6.4159322816437	-1.34540474930913	1.03886859429867	-1.29506730369243	0.195297012879575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	0.724326877898254
Merged-chr13-52275904-4	5.94840008534019	0	1.35322780699346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116079359-4	5.58875288055803	0	1.36360705274678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100994754-2	6.19821853510503	0	1.38832000020824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31033238-2	5.84483377220106	0	1.37158584124748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119277111-3	7.64561325216299	-2.15115972663215	0.718496976662297	-2.99397185583876	0.00275371344361133	0.0795040774063575	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72381754707983	1.53220248710156
Merged-chr7-128391449-5	8.61397866709822	0	1.36439782519629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92565028-3	4.77318290727411	0	1.44570526211509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105268510-4	6.06511233529223	0	1.36149765773554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4647466-4	4.70427703819198	0	1.36581314411052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85483305-3	5.05287927001423	0	1.37204726045825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43554713-1	1.90916960946173	0	1.55767541348778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62252303-2	4.85895620105237	-1.72145839748743	1.33576676203814	-1.28874175223584	0.197487882004222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr11-120917114-1	2.29354032922335	0	1.44293607904305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145610457-2	2.29922711317385	0	1.72965400714129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76117298-1	1.856064738526	0	1.81830723122109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116114087-1	3.23335607668074	0	1.58427147893247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56727444-1	1.62145683251222	0	1.44778212245251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96343428-2	3.09473896180231	0	1.52712356786501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64196180-1	6.25578466030478	-1.71355025544744	0.922089183233309	-1.85833462381466	0.063121509888897	0.688229886433895	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10413537157041	1.90315308979213
Merged-chr17-35220784-3	5.10883625301256	0.897264789021638	1.1851494995343	0.757089961540058	0.448995967746465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.815004392037195
Merged-chr10-78312088-1	2.52036046098019	0	1.47511647937588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46352292-1	1.63304972499886	0	1.96153235389507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105218786-1	1.88902241016747	1.27331178404511	1.45206067730049	0.876899845819327	0.380541039961861	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr6-100807806-2	2.09282405234061	0	1.62386520783278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27599152-1	1.68411341892898	0	1.51568962422742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80257197-1	1.75340994829835	0	1.49560841248445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184771780-1	3.92437840104749	0	1.39867955152318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35018647-1	2.4265597627678	0	1.50417686200478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-99211102-4	7.58861868307118	0	1.35174001998421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128455483-5	11.3649488819109	4.54157553786983	1.01530551005258	4.47311227300897	7.708927483606e-06	0.000716324083899724	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	3.93433843880249
Merged-chr13-44498620-3	11.9415447433804	1.97158939687748	1.10751432294217	1.7801931370421	0.0750443581805263	0.764350059272106	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	1.90363402565156
Merged-chr3-41409026-1	3.27668948612463	0	1.39808078299232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120495002-1	1.82046614558933	0	1.55361670890897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147449204-2	2.11611796681561	0	1.45062416182162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-10220670-2	2.96231494902237	0	1.44202796020659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45498334-1	2.63836660580888	0	1.43901054878283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54705776-1	2.78579472615513	-1.26774398487112	1.39038970963813	-0.911790396665893	0.361879066671179	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.376242425970964
Merged-chr5-34238687-1	2.00300882553992	0	1.48350361179517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7847607-5	14.9964188293815	0.0933254979444139	0.466527339325636	0.20004293441691	0.841447002885865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86630796491275	4.00147268240059
Merged-chr16-92573487-10	22.8614908131107	2.11815815030013	0.644947889845991	3.28423146063154	0.00102260900218698	0.0365213436485638	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01259914296816	3.30912153259964
Merged-chr2-101782354-5	24.2410341337349	-0.678854471516377	0.461939603720056	-1.46957408728215	0.141677142647359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61942193768911	3.15521496205791
Merged-chr3-136742902-4	6.59298134273459	0	1.35617416173915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47553868-4	6.20990755394238	0	1.37812202602808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93579056-4	5.82758198788448	0	1.36956587945085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59225596-3	4.11430253370211	-0.695144185879445	1.37546472611759	-0.505388595345206	0.613285927481044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr1-191633530-2	7.89967850311713	-1.35122299828189	0.863139562562397	-1.56547452681988	0.117471685669578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18069501644732	1.03838943879457
Merged-chr1-156454558-4	10.907721290583	0.860604160176395	0.68908199721399	1.24891400973452	0.211696526899672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9272926343824	2.30525225106954
Merged-chr4-102593809-3	6.05536203602444	0.792578303010812	1.19409077549586	0.663750461250892	0.506850036742313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.02186287315087
Merged-chr10-120151802-3	5.70008724210768	0	1.4040638757903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160618770-3	6.94869191856641	0	1.36890033672487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75722218-2	3.60662355763803	0	1.3762932082508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25859658-3	5.21567938844388	0	1.37560735386242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32552822-3	11.943264780873	-0.283583404522729	0.539781842858214	-0.525366698185175	0.599328299174907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83359629374889	3.66574822429263
Merged-chr4-63283530-5	13.1724483919515	1.01005837084015	0.642001605340847	1.57329570897863	0.115650362476088	0.993463662110881	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0007239609608	3.41972204792728
Merged-chr8-126757128-1	2.91390239752081	0	1.39443976280671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74687430-4	6.51174933464234	0	1.3830112554624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-42961796-8	22.1426802274402	0.0693496019414511	0.376113772233434	0.18438463853541	0.853711719888412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56605541163222	4.60700818102321
Merged-chr1-195232775-3	4.13181194487519	0	1.39983795556149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65794991-3	5.19618473296195	0	1.40679821580663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74398243-3	8.31072890131062	0	1.34994682004721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53460133-3	5.28503968085333	0	1.3895002081719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144214696-4	7.09572345508541	0	1.35571198361579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87751550-10	36.5624001993191	0.53800322662082	0.27256079977979	1.97388335760494	0.0483950075413855	0.57703536190879	C57BL6J_F1_Control-BALBCJ_F1_Control	5.30173154128458	5.80499904855856
Merged-chr3-139021936-2	6.2952289518453	0	1.37272641220246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112995748-2	5.66724298304434	-1.30102945638014	1.34706961163365	-0.965821992526668	0.334133261686677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr11-3136136-2	3.08181592524432	0	1.43308149408206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124497020-3	5.51865621421843	0	1.39984011854732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115503196-3	10.3078062152331	-1.29320262978575	0.642823689322219	-2.01175322451057	0.0442459569481876	0.543294776089118	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83164368177077	2.32066643467004
Merged-chr7-101326842-2	7.82664291320826	-2.23855270642643	0.910748192505558	-2.45792714698445	0.013974151895446	0.254479371150602	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35157965090746	0.577068348605183
Merged-chr18-32173208-3	8.09464555559824	0	1.36013649126211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144258071-1	2.77385395479357	0	1.42084099418444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53288982-3	4.3077887438838	0	1.41229511940778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96296139-1	2.24395677709164	1.76294247203738	1.5049140934407	1.17145721454887	0.241415046069501	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr14-21683029-3	3.41226858147744	0	1.39528645484116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4458478-3	5.24624421233383	0	1.38415666332098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43424715-2	4.53034701962941	0	1.41011915890882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113783878-2	4.90474817840134	-1.00522729755594	1.03292506529313	-0.973185114130883	0.330461307796481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.67591700901439
Merged-chr13-104152634-4	14.5546737815176	-1.60946602640803	0.50844535048919	-3.1654651278835	0.00154835220310612	0.0507335005477067	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57203730509561	3.02053288632899
Merged-chr6-86660728-6	13.8397454223236	0.963230613031764	0.57170009457543	1.68485298878095	0.092016938569339	0.863298026180652	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99535888864231	4.01915438769521
Merged-chr4-15289088-2	3.93178552850808	0	1.401571137015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91769620-2	4.50814480333118	0	1.38387945569404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126721825-4	7.12125522899107	0	1.35172967732527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32824104-1	5.31148831566737	-1.80249025480641	0.878000469660864	-2.052949078151	0.0400775164361691	0.50770769423298	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55196762079915	1.39293125551424
Merged-chr12-12176443-3	5.14432960174477	0	1.37121517934371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109022019-3	5.24371058303076	0	1.37321153375707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81412575-3	7.60350749869988	2.89812736109614	1.12461730302863	2.57698983760199	0.00996648807335189	0.200593186827174	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.98022358911587
Merged-chr4-139259076-1	3.93224397510371	0.108967639161869	1.05122222591943	0.103658043442302	0.917440723703225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62745902464378	1.51226750748471
Merged-chr7-84615191-2	2.46824454462723	0	1.52549689135515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71866439-2	10.8620461507413	-1.41271118711078	0.787808918107567	-1.79321553061918	0.0729384677016771	0.751063111535416	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66287514638307	1.41478649953382
Merged-chr6-114834667-2	2.76527001835252	0	1.43433924979957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25710999-4	6.95239217517597	0	1.37619844464723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150548265-1	4.08878287222887	-4.28605530401121	1.28069471369732	-3.34666432067758	0.00081790187865109	0.0307987539838327	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72780099208748	0
Merged-chr4-63278399-2	6.9149459543194	-0.10133840455648	0.834356151764891	-0.121457011304012	0.903329062569291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27643187026249	1.73127367142357
Merged-chr3-15346830-1	2.95763485371035	0	1.42482297064137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84944300-1	3.39909441468734	0	1.42075876615644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38939369-2	5.85175028903153	0	1.42959313313755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150900895-1	5.13914209855959	0	1.37813316238902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105198202-2	8.83046566845908	1.15881889009047	0.733310021382162	1.58025781225012	0.114047837019197	0.986305211236326	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92370951213634	4.12302004288881
Merged-chr5-121917780-5	20.4685485034344	-1.04559302361804	0.4604863973298	-2.27062738374265	0.0231695443093305	0.356286636240706	C57BL6J_F1_Control-BALBCJ_F1_Control	5.24260707710573	3.33411308125546
Merged-chr14-63411117-4	9.2593934096805	0	1.36860659718548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63908704-7	21.7876159280243	0.315359689586473	0.41475228125122	0.760356733024108	0.447041378468709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5989627229889	4.90586168576495
Merged-chr10-30723186-3	4.74035719879658	0	1.37261201720427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152575109-4	5.79264169232761	0	1.39622833697122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122465150-3	10.5085104029972	0.164840254883822	0.664349741301807	0.248122705008983	0.80403946874961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47032133658633	3.01182597967763
Merged-chr10-39774666-3	5.45719968574683	0	1.37675083243764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74790470-1	1.91320933285979	0	1.47081069037418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123207647-3	4.38004330705711	0	1.39223329229942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34140069-3	5.68386596250134	0	1.37066242418351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89876826-2	3.65935457765965	0	1.44692307096511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143119418-2	6.74735926827914	0	1.36495139162632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31073530-7	16.3485630202749	-0.896448294545284	0.492530473204728	-1.82008696581229	0.0687457622165406	0.724385518981224	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15447865899264	2.76669197674944
Merged-chr15-25282119-3	5.67102461119779	0	1.37079322050235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140663152-2	4.64149981611131	0	1.42312495621238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20040887-2	3.49980268508429	0	1.40285052955549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34196759-2	5.38022971355191	0	1.40191506792329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7397428-1	6.55186509942968	0	1.35541665281295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91891175-3	8.37163445943957	3.3089005571375	0.87375503041513	3.78698884922632	0.000152483940323723	0.00831534696649707	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.93977076578615
Merged-chr14-104460428-1	2.25937423622584	0	1.47856331207468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35063233-4	10.1981226822444	-0.270196763464775	0.579707826665741	-0.466091280876513	0.641150164064059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34391709441359	3.14167137216029
Merged-chr17-56023190-3	4.37003242717212	0	1.37741143445195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111095909-3	4.57344589425263	0	1.36437145214436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4775110-1	4.22818315227635	0.0729021310786837	1.11440396628534	0.0654180470316247	0.947841155403496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.32514197764128
Merged-chr9-121265529-3	5.25143079431599	0	1.39910369080619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104165568-1	2.07401254805096	0	1.49328801527455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95883821-3	5.32228073164936	0	1.36598706504264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20171240-1	4.70062590748911	-2.85279829264422	1.04545614306334	-2.72875941432139	0.00635730658183378	0.145567324550085	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96945729934465	0.716426531808663
Merged-chr10-88621505-2	2.92567413843452	-0.037471210436191	1.32764970575709	-0.0282237176521071	0.977483720806272	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr2-168625241-1	3.27140673812105	-1.42379354042794	1.25224813260181	-1.13698994900453	0.255542487414598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.600815099743027
Merged-chr11-72779551-4	6.68571777836863	0	1.39088401217711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51358240-2	5.45338986770942	0	1.36936581541658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60350488-4	9.45822304106639	0	1.35149409818015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104370817-5	13.4965418861649	-0.295710605078301	0.558606153618817	-0.529372265526615	0.596547233728622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39726049287154	2.95073222820143
Merged-chr10-93166112-8	26.0735176306898	0.722297116150916	0.353198634415034	2.04501672931771	0.0408532088202343	0.514655753941857	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48582858674874	5.28894777804694
Merged-chr15-91254339-4	6.07182960072611	0	1.36560881804356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169919450-2	5.87659712559886	-0.599723078751803	1.25781626859109	-0.476797043994007	0.633506650869898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.71701424649985
Merged-chr8-71752445-6	19.6822634506385	0.0089503915751614	0.496312750084805	0.0180337732077849	0.985611910663866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17389378498527	4.87009047411359
Merged-chr18-76151203-5	14.1109664391574	1.82993348779209	0.56763315458803	3.22379599042307	0.00126503487623539	0.0433035458673044	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47843137798393	4.24949706547586
Merged-chr7-90055006-4	6.2783587729667	0	1.37363964550351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49267119-2	4.01316140708779	0	1.40901560455826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132011911-4	4.25275930817237	0	1.3833392916718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-4821967-4	6.12910489436463	0	1.35643314838414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34510584-4	5.63611879376143	0	1.36129202097294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40294586-2	5.3712958397157	0	1.36408896188253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30026904-7	15.2489185947462	0.712251327047086	0.541520708417742	1.31527994400842	0.188415836003368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14065647517635	4.08096208585386
Merged-chr11-49236053-3	4.81650133479171	0	1.38121173054183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72788205-3	7.47574406602735	0.331306220358178	0.805257280158948	0.411429028363187	0.680757972139168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	2.11378131411959
Merged-chr18-76161423-2	11.0417725138271	0.727781493862105	0.563654346437845	1.29118403585727	0.196639869425239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89017604405251	3.32027867020502
Merged-chr3-121500413-3	4.08053154737583	0	1.39660170512043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89871580-4	14.8502513974222	0	1.35465606652201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9032583-1	4.68082178027839	1.66128247125654	1.03712420391259	1.60181631572118	0.109196234026792	0.9618859318526	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8134253095212	3.62510501161888
Merged-chr13-102860903-1	2.1612940832096	0	1.43241960253514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165626574-1	1.45689454826882	0	1.62730761887428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135475635-3	3.37972227901713	0	1.45014965329516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111139899-2	2.28463611271876	0	1.46420055572069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23045139-1	3.88308984386739	0	1.40494868804647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57529151-2	1.85735865929224	0	1.78207675883901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17915285-1	1.68274349048023	0	1.53821439630317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91869501-3	6.95483445979794	0	1.37548009592253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9991478-5	11.77785798215	0.603642811997907	0.55894892109769	1.07996059964199	0.280159725805959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67371794261566	4.34360310638466
Merged-chr4-105704383-2	4.00685149101633	0	1.40349112009556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54669233-1	2.2859892329824	-3.47663175479445	1.55936426270874	-2.22951868138575	0.0257794137344724	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	0
Merged-chr7-15912320-4	5.71817130510678	0	1.35977459416612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64173121-1	5.83972783566308	0.0434123970930723	0.814545372984362	0.0532964749821318	0.957495688768721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67259798499517	3.04258097980782
Merged-chr7-99833286-2	3.33656595332362	0	1.41199412285057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70104154-1	2.0279502522044	0	1.56083772945175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138495275-1	1.36603517433255	0	1.78817359047401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67899292-1	2.55841530023604	0	1.42464334790305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173976942-1	1.32621829167222	-0.0285097024275877	1.757198299866	-0.0162245219732809	0.987055272331413	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr12-115617574-1	2.98897572963585	0	1.42251968028073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33160471-1	2.97453919741768	0	1.39931622260616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77742754-1	4.00274350400253	-2.50306822183514	1.18769471237476	-2.10750136020251	0.0350741439111627	0.469087481496406	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0
Merged-chr6-115283992-1	1.54066739665649	0	1.54600858200688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-46948685-1	4.69253434399779	-1.39387605011428	1.51574827044953	-0.919596002376368	0.3577839165514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97142967812831	2.43836150107974
Merged-chr5-121961359-1	2.3885365993776	-2.50750205227497	1.88625397463743	-1.32935547704118	0.18373071938732	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28262991457806	0.788686275880602
Merged-chr4-137865600-2	6.96870926445821	-1.26471266751673	0.69877360876318	-1.8099033101082	0.0703107827409678	0.733734659054765	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40131443827087	3.40207607981766
Merged-chr11-99187812-1	3.09667589214045	1.38887784755486	1.37060183782164	1.01333429536492	0.310900511596063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.09662457429765	2.39560096100068
Merged-chr3-149086715-6	12.2749369180255	-0.1401348251396	0.685743071548805	-0.20435470798574	0.838076321070169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62741322732168	2.56224882482233
Merged-chr11-106131960-3	4.84864474459183	0	1.37544618572102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-98107272-1	3.42511945584221	0	1.47271132091561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66162942-1	2.53940066042558	0.568224131788838	1.24697950308229	0.455680410451253	0.648619810767668	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59982791176663	1.62069611143677
Merged-chr6-50874087-2	3.21669828634204	0	1.40448823205312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43701144-1	2.18655409536716	0	1.48137818937744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38635258-2	2.85091615750187	0	1.46904089142102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102369651-3	9.78107156789528	0	1.36215337390811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142344914-5	12.0791817414523	2.43347648599517	0.704609866967146	3.45365087842098	0.000553052838039103	0.0231580174168846	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	4.44956065532051
Merged-chr17-29848977-3	4.91943574910168	0	1.36993673839043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-7858734-5	11.2907525782459	0.487489392756289	0.920482507928156	0.529602016939509	0.596387895647641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.55528346522961
Merged-chr19-34043294-4	9.38650750953787	0	1.36680274056157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109434468-5	13.694394391296	-0.181072207903297	0.838828863340314	-0.215863110840329	0.829094452453446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21444166002597	1.58059388295115
Merged-chr6-125527892-3	11.1177607949751	-0.0341929535932493	0.647294863857644	-0.0528243857667456	0.957871831590653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81973743637996	2.95684263239611
Merged-chr11-115428098-2	3.69395336458197	0	1.36612343646391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59265307-4	7.09994998728254	0	1.35925657959655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64809509-3	8.94198507402695	0	1.34392199840119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109343795-5	11.1990569587526	1.64818542406226	0.862289063421225	1.91140708374858	0.0559522870800307	0.637688204473917	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	2.48205307454695
Merged-chr9-59476806-3	4.87699802033975	0	1.41089680608577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68666589-4	6.28448506719976	0	1.39636477425432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64367177-2	4.3662612247012	0	1.40038921335832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55509975-2	4.01715585592301	0	1.46360279397168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38481934-3	4.8373066148559	0	1.4347973239383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62252162-2	3.58877448239416	0	1.37698589217663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34052342-3	5.69294610748276	0	1.38972962168097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44599731-5	12.1535792057157	0	1.35413541787128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132624350-8	31.2968202157315	0.295805047953698	0.426886720202984	0.692935699224945	0.488349905005113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49694058918862	4.80668918555634
Merged-chr1-191421157-4	5.66074410409648	0	1.36414380243542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82715842-3	4.21563749057874	0	1.40234935157926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102795904-3	6.19990286067556	0	1.35982864639175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68031062-1	3.20218352056426	0	1.41382902067564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60652776-4	9.86157028557819	-1.38434726054592	0.963442084963745	-1.43687646839511	0.150753097366034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	0.879366456215217
Merged-chr9-70833821-1	2.75889057793975	0	1.41195324514491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47445092-2	3.70901094412324	1.81738661834023	1.29379454304318	1.4046949170658	0.160112017894687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr15-58976636-4	6.88793412666601	0	1.34842464003355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4922816-4	6.20558356909753	0	1.36115062643509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3737200-2	3.51355412967146	0	1.41164569937427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50795652-5	10.5346268761127	0.0205295022465964	0.636300394463243	0.0322638527733655	0.974261635495899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4505050359387	3.01367625810187
Merged-chr19-34382856-2	3.26256985695812	0	1.52119464465503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88116374-4	9.19159526777115	0	1.35612750649544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4808291-4	9.23787395538696	-0.921904794869265	0.718095461187146	-1.2838192757063	0.199205197462345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54825825776297	1.82415053547332
Merged-chr7-118478840-3	12.3329487718492	-0.484758631304071	0.717159365886879	-0.675942690512856	0.499077031861644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64109723835872	1.39020008251549
Merged-chr2-91517536-1	5.07085677318019	0.585008758526579	1.33549236961458	0.43804724896737	0.66135203272561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.716426531808663
Merged-chr2-121855596-1	7.60952261523453	0.259219888735404	0.614974510822556	0.421513224001245	0.673380356843981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51997304872579	3.45429240341166
Merged-chr11-59519081-4	4.36526678716716	0	1.38225571076539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98601960-3	3.62161033847568	0	1.43270982423437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120450843-1	2.68972035064384	0	1.42423085307376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43501496-1	3.26988054956686	0	1.43273257049921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25452913-1	2.30543545830853	0	1.55071518786438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34511615-2	5.18732874970731	1.76027429870531	1.26653709213096	1.38983240967987	0.164579774027972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.13027771100664
Merged-chr15-99449573-2	7.73854854630398	-1.86695317393892	0.842391131801744	-2.21625454430627	0.0266740742232558	0.392840964698445	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89193467783825	1.19182800327718
Merged-chr3-109323941-2	6.66364263875387	-1.39442243829704	1.12899615259442	-1.2350993713244	0.216793523357704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.465515277017237
Merged-chr18-14657649-4	12.6046264241577	-0.231033958393977	0.624649892605034	-0.369861519435272	0.71148567444532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30406722002565	2.23659438538296
Merged-chr7-95791068-4	5.76312162957734	0	1.40405753748611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59127131-2	3.43155375851461	0	1.4663707372696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63665699-3	6.12885808641565	0	1.3804798232488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46204741-3	7.89157272419101	-2.9934520152594	0.780472600674762	-3.83543511030547	0.000125342196887404	0.00711218839311316	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10930129132978	1.17858215524007
Merged-chrX-96117556-3	4.5794762388334	0	1.38865569910402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119140313-3	6.89421213484752	-0.38079085982057	0.859495209833966	-0.443040118739149	0.657736716634397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04181016172925	1.70340695421451
Merged-chr8-34689946-6	22.3309807320855	1.89093037818506	0.42576565989743	4.44124680849227	8.94391399567423e-06	0.000812325775191081	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85016940509844	5.87069320567226
Merged-chr16-97526370-2	7.35455456608465	0.438404264249653	1.01638419344566	0.431337152896302	0.666223239672834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	2.03470522223771
Merged-chr9-109100839-2	4.44108349435455	0	1.37819867407827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60973648-4	4.48102501666897	0	1.38810466436194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59425877-2	4.48897015528864	0	1.38448961863913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83272745-2	4.03926393785296	0	1.37012503621588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137365513-2	6.09025868178274	-0.695915342818467	1.36808190381579	-0.508679590657147	0.610976830405318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr15-55356195-3	5.07921093671108	0	1.38615715572741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61211920-4	5.0936278050414	0	1.36335980946426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8746291-3	7.60130780566673	-0.032320814458559	1.1982337258287	-0.0269737145281951	0.978480699168811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr3-8729109-4	7.17971769748916	0	1.36732492437238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90456874-4	9.64157383575668	0	1.34114803086701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48418151-2	4.25542998514669	0	1.4228235088938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18887099-7	18.6105864127817	-0.171001441494094	0.38335842316416	-0.446061521441693	0.655552806694047	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98309625756589	4.73611180337577
Merged-chr3-84129398-3	9.29790669961808	1.09706640176582	1.24246660623758	0.882974557431314	0.37725001821564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.977756232605852
Merged-chr3-144706605-3	5.40138053819421	0	1.38166411499759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143814108-3	6.11857768690869	0	1.35485302089357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-78256093-1	3.77494888337034	0	1.37911407905311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40937822-3	6.63357028644147	0	1.37049798218691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47744574-3	7.95244001865487	-0.117711146952523	0.754968811650057	-0.155915244624813	0.876099828793151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78909218093642	2.87205896220233
Merged-chr1-172490445-9	33.6291316821289	0.308307935256301	0.357833640201039	0.861595726670882	0.388910023388742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84879081289016	5.10379990186596
Merged-chr4-125146384-2	5.90068613886606	0	1.37425667595767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90754229-1	4.71409447415001	-1.17574425551963	1.44661055456659	-0.812757968485782	0.416356838238592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.303163067301871
Merged-chr9-120064756-1	1.8151439599949	0	1.55772924894467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120136394-3	7.59292966601761	-0.475877221540599	0.848783998448991	-0.560657625980443	0.57503095917392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	1.30139522650344
Merged-chr3-82029398-3	4.00289983035708	0	1.39534925048478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62044249-4	10.6562231437698	-0.574394811515327	0.583806310182997	-0.983879073412688	0.325174974089009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67080905240859	2.9859401210665
Merged-chr18-32485132-6	13.9733341507716	-2.007697373393	0.538276006098303	-3.72986599931476	0.000191581631499113	0.0100136402948657	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60472309618678	2.3617181621474
Merged-chr8-27253873-4	6.38512299983543	0	1.36868751198836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51349825-3	4.94336433349957	0	1.36958519549744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58610202-2	6.75616478791704	-2.86977138386586	0.730199639355537	-3.93011887324223	8.49038754997725e-05	0.00512809974254681	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64178918619308	1.44422453547533
Merged-chr8-46142874-4	4.61761198155326	0	1.40544306576656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69465893-4	6.62693836268632	0	1.39377464929714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91043585-4	8.14157011213419	0	1.35736436160082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87172279-2	4.91569415582973	-1.83760316421214	1.32392756218274	-1.38799373674381	0.165138952322952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr8-125870958-2	4.13492569990813	0	1.37138077135179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45146678-1	5.45658630474053	-0.159158518762246	0.968249283868681	-0.164377626107113	0.869433875769061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52860153008918	1.34964801094734
Merged-chr11-32671624-3	4.2605626275832	0	1.38222454967149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67245651-2	8.85378462175654	-0.0172326660070221	0.618461617310978	-0.027863759891759	0.977770812630179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97271600034478	3.07684945247441
Merged-chr7-97034372-5	12.8445258351422	-0.101757299381102	0.514934720459249	-0.197612037677996	0.843348615829796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43284469777732	3.31211509580745
Merged-chr4-55838635-4	4.52608390860388	0	1.42696487216383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94731785-1	3.3057370127873	0	1.39340668846336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20508331-1	5.54656571510333	-1.95904265052154	0.764462940145604	-2.56263913872452	0.0103879955029947	0.206618626402439	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51925904886557	1.39949824061849
Merged-chr11-105496840-3	5.56388486587646	0	1.37210077687736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24778572-4	7.69212693082534	0	1.3860637118423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108433030-3	4.26410534173983	0	1.36989105305883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62843243-9	24.9410552697652	-0.0495317187315605	0.364336846453658	-0.135950341596484	0.89186053803859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61970624227407	4.62022387094155
Merged-chr5-23969083-5	14.0184111706378	0.707102468490036	0.587716599597883	1.20313509772199	0.228924045393508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87836268240475	4.57589302725736
Merged-chr12-80835156-4	13.5356770975296	3.56484040251988	1.07462409791906	3.31729058507338	0.000908950267883427	0.0333173483559509	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.03047032153369
Merged-chr17-70748188-8	24.5004797268932	0.205966311183861	0.369577672254949	0.557301824883452	0.577321229087904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52398904475266	4.63458406886068
Merged-chr13-43525053-2	7.50816066171383	1.7455148858534	1.30440569902287	1.33816870561127	0.180841448016738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.09266895777963
Merged-chr14-63382040-3	5.30658911551818	0	1.35680800271814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36572956-4	7.9659288497861	0	1.35700795185685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44055687-1	2.26633564215661	-0.681938601476655	1.49367716086548	-0.456550196617802	0.647994383256861	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr7-116370559-1	2.78858658782768	0	1.4327851411133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92028253-2	7.82743099546501	-1.27145323270688	0.836025457060674	-1.52083076175347	0.128302312686984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8850522765678	1.30064958020929
Merged-chrX-52453501-2	3.05861748214464	0	1.43866558682955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111341827-4	8.90637577817667	-0.0366204048102686	1.12571895626227	-0.0325306814871978	0.974048848683392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr4-63572928-2	3.406837247732	0	1.47829791509957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60937193-1	3.49295694684513	0	1.40988216174562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41375245-1	4.24787263300237	0.365075648107299	1.09732194287962	0.332696935914047	0.73936306270602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.71450075940727
Merged-chr17-84320803-1	2.29225913525243	0	1.56127242156789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50943355-4	5.01926264059372	0	1.35877864734742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125147559-8	15.6398518639488	0.0946118643760434	0.745075563239823	0.126982911591733	0.898953923627649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17540470129796	2.2259409611797
Merged-chr2-90517297-1	3.44053634160477	-0.643120644888224	1.34248214832128	-0.479053405434421	0.631900636188268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.303163067301871
Merged-chr14-61649340-1	3.49139559379791	0	1.40134763443463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71806643-3	5.36441835724061	0	1.3849200762816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90047912-2	8.01234668811362	-0.790266003579972	0.603355978191685	-1.30978399509436	0.190268918989751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2358485425769	3.50390225310239
Merged-chr15-58623680-3	3.94642111474537	0	1.40645847340011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24695907-2	4.60585761445637	0	1.41465533204016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56163139-3	6.56955302148053	0	1.37007106615754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8779009-1	2.80880724569247	0	1.45829551376301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85978230-1	3.83267144131207	0	1.45288449088843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149690532-1	5.216504749955	-1.15325731616473	0.953807850553524	-1.2091086433137	0.226621109020119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02077291728084	2.18927216584514
Merged-chr3-14917437-1	1.64405223265986	0	2.44656134738333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115500900-1	9.01918786023515	-0.0037137875552793	0.523404835538409	-0.0070954399025738	0.994338705552902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89266518198648	3.86330977447719
Merged-chr17-10425532-1	2.14124122479783	0	1.44836353637919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131036545-2	6.29024376728559	1.31127990841106	0.911213460947761	1.43904799984757	0.150136923545546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.92385917873864
Merged-chr2-94268551-1	2.26745242212961	0	1.52998025138095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75654027-2	5.58279154810935	0	1.37896893065359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-21718406-1	2.71066478823811	-1.54896505197207	1.22623044219579	-1.26319246258343	0.206520020981411	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.780058382249	0.577068348605183
Merged-chr2-113399084-1	3.29024639323976	0	1.40530902766349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165589358-2	5.55977497251704	0	1.38455773703601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-77605271-1	2.6298003784873	0.689099120397245	1.35233950679904	0.50956074042999	0.610359234377763	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93051054667104	2.22017358685111
Merged-chr11-20068555-1	2.21533387030395	0	1.44135476173336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35055612-2	5.2692144341715	0.794388773528011	0.900784768585267	0.881885219679772	0.37783888065417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14281375482221	3.40403921082346
Merged-chr12-99639985-1	1.76299941553627	0	1.59624471726806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-36953312-1	2.80420910392548	0	1.40186492821822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62693460-1	2.7045804461928	0	1.44664824978762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-136331597-1	2.64855066305885	0	1.45888572629202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134622817-2	3.94610293034227	0	1.3779149427244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17781988-4	11.7650237923637	0.863282068821285	0.635608031574734	1.35819880482391	0.174400609741995	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11349282353426	3.24709240101866
Merged-chr11-117663681-4	7.11994889203842	0	1.36859833827701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52533852-3	5.57754517245109	0	1.37119757613471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50906114-3	11.5841125580212	-0.0370952575207268	0.525460368491626	-0.0705957285174742	0.943719510081743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36370161240446	3.32884860400347
Merged-chr5-90655565-4	10.9846704105558	0.331547579482173	0.473220689144907	0.700619366581939	0.483540589005636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24034181434276	4.43755367260725
Merged-chr4-74305450-2	3.68065529629493	0	1.38811452249516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32607489-4	12.2516537353914	0.465866184068355	0.463831050312022	1.00438766174659	0.315191794782144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88460648235744	4.22842886620545
Merged-chr3-87351275-10	40.5578273525064	0.590086334864976	0.278938174353227	2.11547356769366	0.0343896054314385	0.463292332502494	C57BL6J_F1_Control-BALBCJ_F1_Control	5.48122075701934	6.01512538894512
Merged-chr17-34657558-4	9.32358314976186	0.989354369400346	0.959294102812033	1.03133581922394	0.30238336664041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5737989534754	3.20571260585833
Merged-chr9-44213764-4	12.1636533881285	-1.09709797407184	0.504772867884335	-2.17344878037944	0.0297465568282993	0.420982317789514	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2376280810944	2.99729536978675
Merged-chr9-51044836-2	4.17061697283761	0	1.38716776855601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3775700-5	23.8643513560831	-0.265619260413585	0.3925585014248	-0.676636117800311	0.498636857315956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.974375953932	4.86042718128923
Merged-chr11-110473595-3	6.26593940541959	0.368470492247774	1.0318281901459	0.357104502248259	0.721013574102124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	1.27992882773773
Merged-chr17-65907125-3	7.25573664746973	0	1.34777468148227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9681289-4	15.5593104080218	0.255823587693855	0.511481918423918	0.500161547219794	0.616961331696909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82198168006053	3.33515139332636
Merged-chr12-32157102-2	4.8156258024001	0	1.41637698029486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100999174-2	3.83271311274572	0	1.37750385443329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112217794-2	5.35880979560571	0	1.36931545201377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60820529-2	6.95794861927467	0.498864600865266	0.857851648318908	0.581527822255594	0.560884772512593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22638694323761	3.62279675959003
Merged-chr19-47890825-5	9.12996421600308	0	1.34658662629036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80109541-4	7.67467733809627	-1.18031465867886	0.688655867605193	-1.71393974000892	0.0865397935642146	0.831280551043849	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33405435746552	1.97731223551783
Merged-chr13-119809761-3	6.50624085766974	0	1.36626039537975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32561610-7	15.3967621522893	-0.475082458776869	0.572873580118955	-0.829297204940434	0.40693625210849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48084933888322	2.96817048781349
Merged-chr14-101542556-3	4.76983580119097	0	1.38804007406867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125265156-3	3.94801539982797	0	1.38600897760747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33666354-4	20.4417941815577	2.95819253926343	0.638872782925287	4.63033113684759	3.650814123782e-06	0.000388365176036527	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32852444445417	4.43807994325946
Merged-chr11-49082168-1	2.98941500630719	0	1.47537504216442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193138866-2	8.07660727296009	-0.509469338730586	0.652942956841766	-0.780266229066701	0.435234186335966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09282950292299	2.24986710229783
Merged-chr7-35712277-1	2.49845691224636	0	1.48050724114776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43741703-1	4.1351755589514	-0.24419870892929	1.06003431964968	-0.230368681846067	0.817805294996555	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57074540165941	1.4965005622044
Merged-chr2-157036510-2	4.47569209367115	0	1.40177281037366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121318486-1	3.48841254482574	0	1.4018354094421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25446016-3	4.43416529779465	0	1.37203727527778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55598186-2	3.66301912333094	0	1.38799929151914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119929963-5	11.0442853843839	-0.665169990005465	0.73492037330934	-0.905091237313522	0.365417053986106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32928830729835	1.82070600302968
Merged-chr10-8770977-5	9.6326192017599	2.84179837661408	1.16878520441774	2.43141200442369	0.0150401011656995	0.267440254912091	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.20027794713453
Merged-chr7-129501567-3	6.43188736242919	0	1.3968223951357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27586772-4	13.2652695869898	0.943367829323713	0.481618679331911	1.95874427178017	0.0501427429115426	0.590491629533913	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70414898864677	4.65346611214574
Merged-chr5-105706841-1	3.21812804177754	-0.0349541949556172	1.26518288814132	-0.0276277803653892	0.977959024591158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr14-20785487-1	2.81805565449769	0	1.42656901725761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120041073-3	4.13823184798889	0	1.37401334454442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44456209-4	5.08571671355352	0	1.37583023457607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-112000626-4	4.85846277501812	0	1.39524377980521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93051130-7	18.1042603257941	-0.267341613400763	0.347948995614074	-0.768335637609612	0.442287807440468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87693871724216	4.52719465737206
Merged-chr3-65680787-3	5.08252358937071	0	1.38684321531762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150570487-1	7.406761245143	-1.08530805035421	0.642650506578185	-1.68879980525179	0.091257801180129	0.858175039844829	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90060980028702	2.32640067329546
Merged-chr6-31457153-3	5.89518466831066	0	1.37598886366836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-14546001-2	3.90745571793304	0	1.39652443530814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23399759-4	7.32871232675607	0	1.3692369769973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122925692-6	16.4923749831389	-0.710846212578683	0.455025522348165	-1.56221173904785	0.118238116052919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.14736412963697	4.41777248681011
Merged-chr10-8743082-6	13.2033612683646	-0.420816681804834	0.567326069480094	-0.741754529613766	0.458236074730396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50077232202928	3.4127660437606
Merged-chr13-103974165-3	4.53446706698253	0	1.37602256354276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57370594-3	7.22805586350942	0.979424439025282	1.02063823173323	0.959619587600634	0.337246707148183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.44790810950236
Merged-chr8-71291034-7	22.4789046039865	-0.353600253873418	0.572457463495692	-0.617688258816942	0.536780853048709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71411105738223	3.51452579642647
Merged-chr5-75877594-2	9.18397595596595	1.86884097511776	0.700684103238149	2.66716622580858	0.00764938277822003	0.167261785374603	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84001395625789	3.61072078771193
Merged-chr7-24838899-2	4.44313944499214	0	1.41068003056398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67996682-1	1.7720250823663	0	1.49708403842211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78668492-2	3.85994155102848	0	1.38289470831582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60682929-3	10.2159279828735	-0.233720737620419	0.586653155194466	-0.398396796388053	0.690337719012703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33588374675345	3.03957289164804
Merged-chr8-22357480-2	4.24917167858194	0.620377324926926	1.40909977644783	0.440265008409001	0.659745180935251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr13-28482050-2	3.97835881720013	0	1.37245163495668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20696796-2	2.5729760747994	0	1.47410199807631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-137416224-1	2.06944179181762	0	2.22637683664983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55589391-1	4.23253517210938	1.43706736452413	1.09875877267655	1.3079006969141	0.190906993127104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	2.52066817208332
Merged-chr7-107668741-3	5.90353926089783	0	1.41411353846613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125420078-2	3.47098993476115	0	1.41290030073759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117955863-1	4.15494941612957	0	1.37331042933691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46791302-1	2.4961157518654	0	1.4165527880712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120716840-2	3.27806879516678	0	1.37992597332585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8777869-1	2.07302742868049	0	1.46888292774118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118512834-2	3.51854497061827	0	1.40059064403247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31005101-3	7.70853781370348	0	1.37331690965461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8681240-1	2.94325270697392	0	1.40516615854806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68056651-2	6.70757779290469	0	1.37709193920351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35898186-3	4.84777317289282	0	1.37003732105197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94054476-4	7.85045187054469	-1.22609233348981	1.19005277394046	-1.0302840011288	0.302876707127953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	0.55634759613363
Merged-chr8-69023540-2	5.17901293758557	-1.88136895268881	1.27911080043768	-1.47084126882914	0.141334048848555	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr5-42967092-2	3.79657574216302	0	1.38925480647464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180318643-4	5.81062032030875	0	1.36117275977299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47802581-2	6.67020368541462	0.00818824091377584	0.968321506522542	0.0084561179924441	0.993253074417131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48214031441837	2.58142649468652
Merged-chr7-75774748-2	3.9057863701455	0	1.43725571560819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12279552-4	9.06106322680112	0.453347893753081	0.771776121632004	0.587408551581549	0.556929351852642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01628926503709	2.3524802242367
Merged-chr2-166703136-3	6.28638176813023	0	1.38240047258283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128754498-2	6.32724949557484	3.81975544620861	1.05864607065058	3.60815153629316	0.000308386359214214	0.0149541249781672	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.75367845361104
Merged-chr13-108300565-1	2.07741617190888	0	1.51155612765584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74868419-3	4.85384111765175	-0.545216268724562	1.23589099597497	-0.441152391675489	0.659102676626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.55634759613363
Merged-chr17-33995149-3	11.564113926255	0.963762456847003	0.686320183276827	1.40424612350103	0.16024557150194	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89428382411787	5.14523204037743
Merged-chr3-95517680-7	16.2308991969655	0.0215178590272768	0.414308841464737	0.0519367603916034	0.958579083232434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1019202607747	3.91206021811403
Merged-chr4-123921962-6	9.95553485031293	0	1.35042495486353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91271378-4	7.03182428374844	0	1.3634748165539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92215549-4	10.0101906178345	-0.686175585106612	0.65305205098289	-1.05072112410315	0.293386691164242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35796335179504	2.21180211172111
Merged-chr13-43547046-3	4.65587903181071	2.69333078361359	1.19406601385825	2.25559621692183	0.0240959303609175	0.365160490239508	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30139522650344
Merged-chr14-20067504-2	3.36217081773232	0	1.40953673481857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135269333-4	6.55885945841957	0	1.3613356978409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93069726-1	5.99644380364189	1.4177451894006	1.00694465202186	1.40796734612363	0.159140739363434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65423785335698	3.23880166772515
Merged-chr11-59224630-3	4.06193423320649	0	1.39193889033589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67797794-4	10.6576206129863	0.592598086615921	0.491401979754875	1.20593345373074	0.227843150299321	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43885280695556	3.95519288677847
Merged-chr7-80084498-1	5.09173505759401	-1.0409497380464	0.959504080956997	-1.08488307523212	0.277973444916448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82361065065357	0.662147012823607
Merged-chr14-77511665-4	9.53668690530907	1.98118307957002	0.677686980500533	2.92344863716688	0.00346177333204764	0.0948958832863226	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27643187026249	4.43625362401494
Merged-chr7-75859972-1	5.21738220483817	1.6653769035218	0.974835824756697	1.7083665384758	0.0875683520359702	0.838050712732976	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	2.94832478313056
Merged-chr8-80265134-3	6.89281765654383	0	1.38361133906827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25003052-1	7.45729415570704	-0.728393633401003	0.682692514866297	-1.06694246317269	0.285997818358786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13780091253444	2.44025133671061
Merged-chr6-108775951-3	10.5582154955785	3.02446112967261	1.14481196841613	2.64188461783554	0.00824461374533666	0.176375032893646	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.14257579883124
Merged-chr13-51958555-4	4.68416156948348	0	1.44078643160907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135615472-2	3.12735816501312	0	1.40561993147562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80849926-3	7.56742463953199	-0.521275913115561	0.673588594974048	-0.773878769630362	0.439002485480279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76670770598174	1.68020903733389
Merged-chr8-120702232-4	5.68964220012189	0	1.37206264767892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58859127-2	4.51125597340689	0	1.41827671483316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36431608-2	4.68804454993068	0	1.37265989553935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11465132-3	7.60143151881716	0	1.3857769798664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71323504-1	3.06923572182373	2.4600907918249	1.11872097694786	2.19902088413201	0.0278764373615385	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	3.18929153164001
Merged-chr2-119242500-2	2.69546921707876	0	1.43737484310975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92957186-1	2.58003295096359	0	1.41952603003962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70703967-1	6.9687473866559	0.668797282526911	0.744499737872501	0.898317687039194	0.369016205703595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7786634928456	4.63851402649869
Merged-chr3-38461952-2	2.09036707784721	0	1.72085124081856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14648137-1	3.63941552599765	-0.946155490930926	1.07483249899754	-0.880281803735347	0.378706667524821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43067782037622	1.48914397899119
Merged-chr6-142994414-1	0.937187262500315	0	1.74684773389248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30927435-2	3.26369582983871	0	1.47515795233531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138134470-1	3.8133375657508	0	1.39377528409208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75828111-3	4.08381249097975	0	1.38275078967311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96623838-1	3.7384869812584	0	1.48601716337263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116876270-1	3.05789018382993	-2.74759636550387	1.33465221756332	-2.05866092255866	0.039526732171936	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0
Merged-chr18-65587387-1	5.27656066633355	-2.5758527335709	1.09415299436075	-2.35419794749621	0.0185627231093914	0.304757192843071	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27589464621145	0.679405493272835
Merged-chrX-71265269-1	1.62303212776014	0	1.66629019105809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141963353-2	4.32820546883974	0	1.366475742579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14702402-1	1.70029705182656	0	1.56950331819242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44639162-2	3.58509745397923	0	1.41696484958549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12178441-2	7.01353114074512	-0.424736477899321	0.686280845360353	-0.618896011408129	0.535984866269607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98380461488337	3.22719912715514
Merged-chr13-3782058-1	4.24629449203188	-0.641089463343289	1.25340698651665	-0.511477493136483	0.60901674436868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	0.577068348605183
Merged-chr3-103695687-1	2.31236119070735	2.15501716307569	1.57631406964538	1.36712423277456	0.171586368848961	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.730937814817307
Merged-chr14-70659304-1	4.24288822308991	0.307330621850902	0.907069931068213	0.338816899694793	0.734747669402887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66069583796294	2.22436839199368
Merged-chr13-36696489-2	3.26733987008444	0	1.5394576394128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100471282-3	5.48994168059018	0	1.40345535021011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106643357-1	4.99845114341978	-0.718165009785608	0.966503151191899	-0.743055011150208	0.457448375695339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68089718199588	1.76197067039868
Merged-chr6-115317155-2	4.93765056842661	0	1.41746841073884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131549182-3	4.02268010817132	0	1.46490896842559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124588919-1	1.38828184064613	0	1.78457562309209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84958783-1	1.49732348739919	0	1.70779598288832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83619008-1	3.16111886159063	2.23491916007904	1.24038977286322	1.80178780007201	0.0715787979086677	0.741814056750294	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.11642553550219
Merged-chr17-5783455-1	1.80455916807247	0	1.4988019248017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48943922-2	4.13708012346121	0	1.37177052528132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78228386-1	2.02926205400196	0	1.43605300140703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87036658-3	7.17406471816782	0.213084097468618	0.790514034638268	0.269551314880986	0.787505459325817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85375318208663	2.22191418010822
Merged-chrX-142377551-4	6.44441644023103	0	1.39381926212298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51156813-2	3.83569622061668	0	1.42414587278247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106165564-4	7.15471449918654	0	1.35787906855592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9027985-4	7.74322394635006	1.78540903000633	1.23824795919511	1.44188328092775	0.149335303501928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr10-4394123-2	9.0774152162025	-2.64439317115485	0.795825074590036	-3.3228321845942	0.00089108504204576	0.0327951874072887	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68424607840581	1.02674429890598
Merged-chr2-129184013-4	5.23924313810208	0	1.38950088832309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72323802-7	29.7079810370366	-0.22014276720589	0.293727498514038	-0.749479596971984	0.453568191576003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29515922859045	5.19181280210878
Merged-chr5-140736352-2	3.11774826248189	0	1.43140561956349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74948112-2	7.36774736325793	-1.10408040992166	0.750731414228792	-1.47067298503268	0.141379575468306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88111298863793	2.61227820523178
Merged-chr10-68130268-2	6.20404480480302	0.655616704439167	0.94317557278575	0.695116289433522	0.486982427121534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.74560409375831
Merged-chr13-52080022-1	2.71154440085226	0	1.39001801170892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45852956-3	4.6534936442291	0	1.38444686700895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35298111-3	3.85744474438529	0	1.39379272489733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116010716-2	4.68115473094655	0	1.36337914293106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81077757-2	3.46709153702553	0	1.41278940696459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8680638-4	7.24764201280563	0	1.35741677751399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94917354-2	4.3980330804279	0	1.37021267077808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143132063-2	3.68797818872744	0	1.40982927018245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3373150-4	12.4758554407411	0	1.39872712071334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30642240-4	13.5718961892227	0	1.38146780765378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134094821-5	9.55851152708935	-0.28093988761124	0.703005079894334	-0.399627108887274	0.689431186581666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28319444952064	2.11419992436815
Merged-chr1-152540006-2	4.4080608493053	0	1.37508083386054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50114336-3	9.12393674597275	1.36744384319579	0.710754392008099	1.92393301901707	0.0543629797906548	0.62476051129814	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67709642602482	3.25225345809187
Merged-chr4-133493963-3	12.9275568058584	-0.369322964491365	0.567439471748744	-0.650858783850866	0.515137649584476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80777403487224	3.54765683211793
Merged-chr5-21358815-3	4.28483611066411	0	1.3869122433367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180429107-2	4.76473027793828	0	1.36590356256543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53558150-4	4.74466127034099	0	1.40220896462002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26235607-5	11.363576099816	1.7201955446079	0.82265683569693	2.09102443444794	0.0365258736844571	0.480277629928903	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	2.4703873013829
Merged-chr10-83922815-3	5.80279697452308	0	1.36803425642335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6223056-5	17.1480282140717	2.17389043327311	0.550472369614811	3.94913632957504	7.84336741920956e-05	0.00478515835623807	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30316893960524	5.44006484590668
Merged-chr1-154003881-3	4.40569814375362	0	1.37141436353842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128743685-4	12.7155953821584	-2.60371779392546	0.654493367481642	-3.97821876170271	6.94334749464576e-05	0.00430368787299258	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12944436823641	2.63406669039082
Merged-chr12-84803232-3	5.10038678477565	0	1.40460336388717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-117710777-1	5.51995313096736	2.25473323972497	1.06328515572496	2.12053486083672	0.0339609648622074	0.458882448159268	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	2.58132405424117
Merged-chr1-16203223-2	4.10868230660683	0	1.41690530957098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112321600-1	4.41855030174921	1.37717524982503	1.06798619104582	1.28950660726843	0.197222020794656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.33962963608869	2.1881845164991
Merged-chr19-36903023-2	2.49621038160379	0	1.45082904650257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13306982-2	6.52780031788386	0.80588390565732	0.910777775203562	0.884830446677514	0.376248085591929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	1.78982978868021
Merged-chr11-74993259-2	2.45681721813972	0	1.47117531707655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65772341-5	9.468105145805	-0.033910012830634	0.877933935655295	-0.0386247887835927	0.969189538445048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.338064021838
Merged-chr17-25914118-2	4.89314576446006	0	1.40168484755829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69953433-1	2.76336636139588	-0.716820689413098	1.0526022687835	-0.680998617114452	0.49587236545985	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10015108892538	2.09074318537823
Merged-chr12-56301819-2	2.82552654758459	0	1.41623225555523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9014670-2	2.08822895637901	0	1.57726372698993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23419145-1	3.19355832707684	0	1.39653369966798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75184521-2	3.94847109222152	0	1.43211230591882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-12535742-4	8.77507495444624	0	1.35917034033124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39272073-2	2.76715567743459	0	1.47005743043495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-61181292-2	5.47120679021906	1.10429162663896	0.888345399842788	1.24308813535184	0.213835357409965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56586581096048	1.8345673641002
Merged-chr2-25305160-1	3.91133500561887	0	1.38532340297503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43279972-7	23.0176373726234	0.177684519098004	0.432129341202434	0.411183648403932	0.680937877341165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57096228999048	4.72504937941072
Merged-chr3-127077581-4	10.5467516777778	3.66298963758229	0.852160720691499	4.29847275125507	1.7197903901695e-05	0.00138703391423181	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	4.26917956382489
Merged-chr12-40548023-3	5.02031067026715	0	1.36426117247078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60964138-4	4.49071471941244	0	1.37664357460716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121124445-3	5.92760332424695	0	1.37346975570583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89227938-2	4.69947602499453	0	1.3773693995041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38799541-3	6.88378982261849	0	1.36422352630138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100850796-3	7.81788230654981	1.47246086651069	0.870933648115404	1.69066939794658	0.0908999621382978	0.856574658371533	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	3.13745573901568
Merged-chr13-112752416-3	6.64299938073967	0	1.35443068070975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99152384-4	13.5719018883343	0.550984469627918	0.496771616932775	1.10913033443793	0.267373960463126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44859223936632	3.87862074065002
Merged-chr14-61549794-4	6.16622120766053	0	1.37051843481533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149068324-2	4.56266424885832	-0.697115223890992	0.824844973122798	-0.845146962891425	0.398028790245254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05753712172178	1.34263109599227
Merged-chr11-3135063-2	7.05451081170496	0	1.41502003477892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37197073-1	2.44067672220061	0	1.41919136472332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33722184-8	27.2661588249512	0.371383979337453	0.374516327441792	0.991636284255653	0.321374982655376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5987531706459	5.07318512495001
Merged-chr5-62889541-4	11.078968901038	-0.0325937213624037	0.905903869734809	-0.0359792274338613	0.97129892233496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21444166002597	1.20194974038739
Merged-chr9-61627977-3	3.54372558106545	0	1.41997961677296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21736442-4	6.2927465214308	0	1.37375496927896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11652860-4	6.35807070030475	0	1.41836851458257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83156241-1	3.16671238544854	-0.142695396189012	1.41726993973271	-0.100683287063806	0.919801878939425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.465515277017237
Merged-chr11-82747207-4	4.89984600830619	0	1.35832584585781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47707956-6	12.9105080032592	-1.21557250466683	0.501337800834758	-2.424657591434	0.015322831287523	0.271137300116688	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13827123310306	2.62423175607779
Merged-chr8-117537092-2	3.15814518950677	0	1.3993428742711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-52098823-7	14.1342573886994	-0.458368784609324	0.517575881090059	-0.885606925198988	0.375829378520259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28040148998732	3.73276536407514
Merged-chr6-82044719-6	17.5659826709224	-2.76391478955474	0.636781332509212	-4.34044568904625	1.42194011580029e-05	0.00117291718899527	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7061783117699	1.79230704629306
Merged-chr1-162626163-5	20.6331956766834	-0.751427568783252	0.358715723211147	-2.09477176538745	0.0361912861566574	0.476579971945188	C57BL6J_F1_Control-BALBCJ_F1_Control	5.53109765450722	4.78324311786136
Merged-chr14-45632914-3	4.17573972721598	0	1.3913673795911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33678977-3	4.61153907620096	0	1.4087900193262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14800061-3	6.43115879588089	0.125777696540205	0.73651915234924	0.170773151165204	0.864402141188843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42194161705889	2.55795048470371
Merged-chr13-64254389-5	16.2514716045831	1.19464638959149	0.63786304896945	1.87288853229795	0.0610837790785535	0.674540596121685	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05726306384182	5.04524401242361
Merged-chr2-90557035-10	34.2668443603419	-0.125969775442807	0.422873562049907	-0.297889929160291	0.765787174577934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71141727985307	4.50346808218695
Merged-chr6-124271270-2	4.39381939431381	0	1.37159834792223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59316713-1	2.92698444824759	0	1.44018334226951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104132691-4	9.54606260580616	0.384675538662999	0.931145660738151	0.413120690868122	0.679518190775351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	1.6449292036023
Merged-chr12-108639853-3	5.63732221583948	0	1.36950420486141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43322725-3	9.37087606565746	-1.79121791335992	0.763864779145316	-2.34494109725036	0.0190300857274303	0.309732659387901	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2838787288397	1.49873523349828
Merged-chr6-116123457-2	3.63645257543292	0	1.39995565143858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122545458-2	4.60918826246591	0	1.41616206542212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192101506-2	4.5025611251219	0	1.41071309690305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148520922-2	8.44987399085724	1.08631456351624	0.666733085433044	1.6293095201818	0.103247511797684	0.930403600283911	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60139579763857	2.81649786832976
Merged-chr8-81769335-2	7.70215443520964	-1.52846772848323	0.864253184767942	-1.7685416211612	0.0769704005113699	0.775970697588568	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75238521850622	1.02674429890598
Merged-chr2-73037427-3	5.66691698388615	0	1.38745374145738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126707887-3	4.96684665674354	0	1.38126464442374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75229219-2	5.81596605926731	0	1.36604272450614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145794736-4	6.66023434910069	0	1.35335500197056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40687550-6	14.7049562334372	-0.742115429388952	0.599428446010394	-1.23803839195193	0.21570182572677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56969454758504	2.47451908504411
Merged-chr8-115160087-3	5.69982859975743	0	1.36942829063835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38469406-3	4.60060796380506	0	1.37812330396809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30408880-2	3.37849701820748	0	1.38866671416154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72943605-1	1.88382017638755	0	1.46580855881002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54317456-3	6.92748414886088	2.91492742659396	1.1352914640061	2.56755865697084	0.0102417460152704	0.204455039164189	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.49169296430729
Merged-chr6-108232253-3	3.90523193172729	1.81331738899465	1.28156802415212	1.4149209053451	0.157091687802484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr9-108626615-1	2.9039434036716	0	1.40217591220635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96589387-1	2.07433541585181	0	1.4874309110584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121441236-1	4.37350902486442	0	1.36734496600757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51453811-1	6.29976360591141	0	1.3525398600278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19065447-5	10.4949179331119	0.199764455452421	0.660918336214827	0.30225285713285	0.762459313128016	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81435536777735	3.04648624463368
Merged-chr6-136489510-1	1.72919910249635	0	1.49424035225714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122930677-1	2.5533881261453	0	1.41326310258308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47905763-1	5.78879191240467	0.135360797367536	0.891845910325151	0.151775991570321	0.879363618683482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98985104447796	2.6702664704762
Merged-chr10-40138209-2	4.13385427272287	0	1.38497686579753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34243583-1	2.11623121830418	0	1.49925179291596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88035634-1	1.2604260172535	0	1.81618298245524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45388631-1	4.63213564913443	-0.769994161076311	0.871380590402571	-0.883648510831048	0.376885983229535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	1.60294768781932
Merged-chr6-96071257-2	2.50479690393741	0	1.49219600044249	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80938270-5	13.2990397941284	-0.250017761238644	0.504665132209409	-0.49541318645113	0.620308488488525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53698851098525	3.02270660117651
Merged-chr6-139191874-1	2.4598059017891	1.67779434413427	2.20118611584184	0.762222845246599	0.445927013446241	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	2.29981761004976
Merged-chr4-63159115-1	7.28701616755358	-0.911064767802243	0.65362409501643	-1.3938665583914	0.163357904490979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05493980485882	2.36618072616049
Merged-chr11-8564580-1	3.50299654162699	3.15848885929583	1.22540777307094	2.57750026456947	0.00995178053392421	0.200553469406622	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.35163392625407
Merged-chr19-32935782-2	6.75411571314785	-1.33894593985404	1.03208128894316	-1.29732604805296	0.194519025559572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63267172601457	0.67591700901439
Merged-chr18-56427898-1	2.35919271305963	0	1.48479330052431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-20013492-1	1.4622580235235	0	1.52699252321151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83231275-1	5.88695950121939	-0.673094527586945	1.03276833966395	-0.651738150499423	0.514570107041052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04876993946	3.18064853859277
Merged-chr6-89336467-1	2.10670758268851	0	1.50082225776517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77001733-1	4.14166899226712	1.79343042174263	1.29670339871598	1.38306911474013	0.166643674726925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr9-99386816-2	4.97597327240691	0	1.3889451174295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-47928224-1	3.62323178145204	0	1.40050776553882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120686683-1	3.62105830826617	0	1.41435968026221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102767996-1	1.89017044781943	0	1.58194204982688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-45047357-1	3.90511250951082	0.71178579900678	1.06791899460708	0.66651665772521	0.505080920000255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73775798795819	1.78577552468569
Merged-chr6-126792288-2	5.83796401762201	-1.90967399477655	0.84535242896232	-2.25902703931507	0.0238817029670758	0.363495185980616	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0168170302573	1.45451904642141
Merged-chr13-9634980-1	2.59349909055953	0	1.49342884812757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60016347-1	1.10763440087859	0	1.90927245868199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145337706-1	4.58003897178999	0.238332213031209	0.918075471464646	0.259599804633694	0.795172487043324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82866868473699	2.49002374009056
Merged-chr4-148167286-2	9.46185636520356	0.198036084044167	0.534972131988325	0.3701801873457	0.711248237889328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72428785753938	3.93494954239483
Merged-chr10-18917214-1	6.26209397484193	-0.349537172699173	0.915084268137703	-0.381972660737048	0.702481643429067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31002630312988	1.6471847477194
Merged-chr2-6336125-1	2.24383199790802	0	1.47023802318879	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117300582-1	1.9662307253858	0	1.51285051544738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63596260-1	4.4870411281604	0.922215805045391	0.885804405541289	1.04110546219496	0.29782660477277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60391341779232	3.29946896925413
Merged-chr3-100430490-2	3.66600490151293	0	1.44983141804093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159509164-1	2.1235784417522	0	1.48290996686304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142341354-2	2.45523776486247	0	1.50266499515298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21264323-4	13.6054708089368	1.10617644664179	0.471898719698355	2.344097155739	0.0190732022814095	0.310140652950984	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7277940315122	4.85051146699407
Merged-chr6-100799433-4	8.28467838973308	-0.0529826366244837	1.03971316796552	-0.0509588973737427	0.959358273112585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27465395918041	0.990919527803163
Merged-chr1-24700618-3	6.12754731883795	0	1.36850908070583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100520891-3	4.49955962420722	0	1.37581842710307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20839006-4	8.30253201428606	0	1.36093884241231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125462414-5	10.774293665703	0.561517544154181	0.574852928887281	0.976802093086814	0.32866713964037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67529500993928	4.133927608759
Merged-chr19-37308006-3	4.25432505893823	0	1.37095377333987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66680151-4	6.23783741015484	0	1.37994940265436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31082786-2	5.47379296889085	0	1.36996547128194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123664877-2	4.45646617654486	0	1.39771218042415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88719022-2	3.83983791975945	0	1.40030364243872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95826646-2	6.20573323411613	0	1.37845923967702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62190952-3	3.66104293359252	0	1.42251921631643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95862026-4	7.05784542195706	0	1.36589962415441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73621914-2	4.34382098279017	0	1.37920435599446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47160193-5	11.3846061096859	1.75470375129256	1.26100711863859	1.39150979035469	0.164070892906483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr17-35215666-2	8.03027746426504	0.688455228415973	0.912402228220475	0.754552331331674	0.450517634658031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.963110257001	3.05755991402297
Merged-chr1-34835820-3	5.52185229313546	0	1.36916348532298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96325700-8	20.6621015008389	0.639515391076658	0.449406040589836	1.42302357626815	0.15472932085424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30266724022398	4.68646363178957
Merged-chr3-132756427-4	5.94263167255854	0	1.39114170869491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39463059-3	6.88669751293568	0	1.3582511790126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67524261-1	4.17288233969065	-2.01922545959197	0.976143546283063	-2.06857430680225	0.0385860510343825	0.496332027491245	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30492589888769	0.904676873936758
Merged-chr16-94713931-3	5.21535791474406	0	1.37529677392155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23846651-3	4.94526772610287	0	1.38979869377291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37778279-5	13.5928398708448	-0.336857811294659	0.579622206991668	-0.581167883547812	0.561127310838178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07048935726883	2.97858044788991
Merged-chr18-62023328-2	2.89743754307069	0	1.50021145368337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120226633-2	6.10929992812839	0.114674849129459	0.791975808093345	0.144795899013045	0.884872020216524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22299259577626	2.33860409010381
Merged-chr1-152606393-4	6.5324232879979	0	1.35910047697903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140818816-1	2.46649802362523	0	1.3992644192667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101981125-3	10.1235343789751	1.08257275892885	0.582344185852983	1.85899127222016	0.0630283755050205	0.687964776249851	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52024010234604	3.67100614857181
Merged-chr18-69537571-3	6.18696680707053	0	1.38082325433743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138835558-2	4.05812736734501	0	1.3942769402047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79522550-3	6.5923874860448	0	1.35718053793977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74774382-3	5.67134252693892	0	1.39934380745219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112283745-3	4.78401041945034	0	1.39492599877995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-89853004-5	13.9105045288968	0.0117791372564284	0.538961562737071	0.0218552454772639	0.982563425173944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17701335725083	3.92551613699152
Merged-chr12-79137093-1	3.59225259732172	0	1.3999439411985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144381146-4	6.1799749444028	0	1.41356443427418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-81156882-2	4.99520545640563	1.41904948173188	0.843855923196584	1.68162531390006	0.0926415187597623	0.866465987312787	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56795935138773	3.01354041533485
Merged-chr8-61397896-2	6.36943932624548	-1.0707666908805	0.846693105507649	-1.26464557691007	0.205998407216874	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52352953733079	1.51226750748471
Merged-chr2-118601297-2	8.74817901798714	0.149054595389713	0.804179410746092	0.185349927389244	0.852954579991567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68884729081939	2.0687098978803
Merged-chr2-127113952-1	3.65151019478922	-0.940948294541587	1.04366588127156	-0.901580008915471	0.36728001446193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46981335012887	1.09266895777963
Merged-chr3-107994370-4	12.9811057847912	0.906261058496745	0.54960593397559	1.64892880966783	0.0991622201536887	0.906627242415293	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7266942667982	4.4128073458963
Merged-chr17-66221427-4	5.6487587100633	0	1.35335775087178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-98035084-2	7.11675612344058	-0.677200056175089	1.34952612531038	-0.50180581425894	0.615804122831926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.303163067301871
Merged-chr3-60580081-7	18.6222109075455	0.0608458627513201	0.42831083922563	0.142060058207556	0.88703256706948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45942162894549	4.48781356459115
Merged-chr7-97748297-5	10.5823452650219	0.26321753018363	0.907101160154074	0.29017439481493	0.771682823861099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.94927122251658
Merged-chr6-136693520-6	24.0989414564065	-0.450182013042581	0.424715455690193	-1.05996145657333	0.289162134604221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08398951142807	4.67132586516142
Merged-chr9-35107377-4	6.77920679070415	0	1.35155120011012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75571164-2	4.67723549837705	0	1.38457072973186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56469005-2	3.38095956963584	0	1.45562939392586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164681811-2	6.21975298370788	0	1.47630716480494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82366978-2	5.0327085860101	-0.239220215665005	1.04660623165984	-0.228567543770133	0.819205053104172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.13743241080208
Merged-chr2-27721247-2	4.75175525209553	0	1.43722665833171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21077939-4	18.7694863424834	-0.690979482770221	1.38565777783859	-0.498665322579174	0.618015178105376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr12-51811472-2	5.11659795861476	2.00572812183524	1.09709651876273	1.82821482662003	0.0675173166862375	0.717035844228735	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.62438888480879
Merged-chr19-29824506-4	5.17165405247759	0	1.36607731919869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150405646-2	3.10772793580776	0	1.47301622091985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115991810-2	6.27040609434424	0	1.36585482371689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66230118-1	3.00851621423885	0	1.40656387994455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-93701725-2	6.76612928375627	1.29757382584103	0.703465436941437	1.84454524373321	0.0651037185425269	0.701203296265746	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94559955552748	2.84396026744631
Merged-chrX-56827674-1	3.5884183817886	0	1.42394887685978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72226421-1	4.64151322657506	0	1.37641424643163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22895818-4	4.59302091645784	0	1.38458479777681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108329908-2	3.61794968161455	1.82114138501792	1.30400705858538	1.39657325704475	0.162541936927907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr19-34410962-2	6.17422225797149	-1.10668171798866	1.13257489124522	-0.977137782713788	0.328500944852527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	0.724326877898254
Merged-chr12-102392170-2	5.32508842127026	0	1.40375716928384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93267627-2	6.0762817922189	-0.547499350178669	0.812734370797296	-0.673651035136572	0.500533198733934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.315908400302	1.91536688454183
Merged-chr10-122562121-8	24.9387626956776	-0.250562309005803	0.485414167344112	-0.516182521776663	0.605726936414727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69972867904386	3.03137307956201
Merged-chr18-26864988-4	5.35605324718357	0	1.40835636047882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107980135-1	3.08784183984731	-1.12858075295534	1.28534184051294	-0.878039380173723	0.379922348210071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.376242425970964
Merged-chr5-90703046-3	6.29991389670892	0	1.39277632003223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100501461-3	5.23856625776173	0	1.39554196584247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68129879-3	5.70490888822474	0	1.37322816565162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119246661-4	5.29935657558395	0.623143364280538	1.38028968529932	0.451458393783048	0.651659205375777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr1-183599427-2	6.31539011201413	-0.0489081577000816	0.807807814262504	-0.0605442988252507	0.951722135177306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38685339442914	2.58467386760829
Merged-chr8-68456821-2	4.94482150114284	0	1.41437580499245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10820351-4	7.38787628737444	0	1.34957154802599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58618669-2	3.8890867247543	0	1.41231862023945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45307882-2	5.83482365312181	0	1.3877286733528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123504504-3	4.91905514877415	0	1.39755500113567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157023312-3	11.4513072445434	1.12838134996115	0.671808530956661	1.67961747725104	0.0930317650072189	0.869368009975488	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5798125855659	4.39367011683801
Merged-chr8-8441136-2	4.72127474021504	0	1.38553429827353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113607571-1	3.27260875662142	0	1.54011338274446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157409032-1	2.20446064475103	0	1.66407501515627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5719480-1	2.71433491883318	0	1.486343052193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98694239-5	10.9583451490646	-1.28661028005431	0.478853985069653	-2.6868530286266	0.00721286821729216	0.159838688717401	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47305672676355	3.27681344134956
Merged-chr15-73034780-4	4.87950702867692	0	1.37536826486038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105245797-4	11.0080165610244	2.15849334570113	0.590724382120295	3.65397706787322	0.000258209339962818	0.0128652626132345	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93177134892138	4.18348978788008
Merged-chr8-83783332-3	5.35099272280506	0	1.38642840940562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17393491-6	12.3651209492113	-1.14766269002968	0.664479708935405	-1.72715987350225	0.0841389551016048	0.818048553097502	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74581649988655	2.16465240298454
Merged-chr8-25067433-6	16.6640032576516	-0.616377598972406	0.8414520918284	-0.732516568629681	0.463853333622741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.25298535761957
Merged-chr3-127802982-6	27.1683028692947	-0.653214955453357	0.436422890124618	-1.49674769640711	0.134458920430694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34067874525182	3.73332083452556
Merged-chr10-93306076-4	6.5069687919962	-1.71255020874521	1.21823952818466	-1.4057582019992	0.159795937612033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34389275758327	0.601513806634888
Merged-chr6-131354612-4	9.75425597571904	1.43930969562303	0.706434260930087	2.03742906484751	0.0416070637113177	0.521494758044631	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43884655774859	4.26606787128163
Merged-chr1-132311641-2	3.86405495077849	0	1.39782864190517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145890530-2	2.65086431191442	0	1.43273303931426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159142293-3	3.8551875111254	0	1.40297143039029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53167072-3	4.45148850069607	0	1.40143266286564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93195428-3	6.52271758800281	-0.208458988983889	0.848688845020003	-0.245624754239554	0.805972725057871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.4068548238317
Merged-chr11-51926408-3	5.84324208813065	0	1.37649664789453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67463944-6	16.0140490795783	-0.312396600603227	0.462764736564159	-0.675065699522927	0.499634024704151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96141885113292	3.78059352069547
Merged-chr2-102885547-4	5.32253598803339	0	1.36942275019908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41368296-8	17.0090334398267	-0.242980463763132	0.474704400794518	-0.511856353883496	0.608751546601719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08777970778512	3.81007022748708
Merged-chr11-99164662-3	8.45581088583352	0	1.37379612545114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166674853-1	3.20432330710504	0	1.38646357586442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21792141-3	4.76225522633505	0	1.36580826866285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17774979-2	4.52465793155971	0	1.37610679386219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72464554-2	4.47802559776194	0	1.37674635954989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116101429-2	5.25141890874534	-1.99407142459644	1.09421532207339	-1.82237571012801	0.0683979975615412	0.722511999504046	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96027510505613	0.55634759613363
Merged-chr16-29527279-4	6.59506254223828	0	1.35016977358648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64181469-3	4.1325532850985	0	1.39329950574364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88958965-2	7.64041122974294	2.09206777540122	0.770437859927454	2.71542701133381	0.00661903648188373	0.1496689700993	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	4.49829386290444
Merged-chr1-65230745-4	4.77115359253379	0	1.408735867496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129588197-6	11.5698984768492	-0.574884382245384	0.583664546271589	-0.984956831655628	0.324645275706415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8786848168214	3.33301393882133
Merged-chr12-119426380-2	2.87976328170469	0	1.47772135686487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116583272-3	6.80958785704998	-0.189975113155641	0.698733706235724	-0.271884856076416	0.78571055586833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72712188292622	1.81026551200827
Merged-chr19-29825185-1	1.50482039824484	0	1.65417814814585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35735200-1	6.63561381298419	-3.05545812018089	1.11425841673755	-2.74214497668054	0.00610393942345386	0.141978623500012	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47749393764168	0.887876939341704
Merged-chr5-21384761-3	3.40269290088769	0	1.41615595995616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82030518-1	2.62002958477412	0	1.43390110449655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80375407-1	2.03704331120694	0	1.53327356548117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11012655-2	2.47619149142947	0	1.48729490100969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129302736-1	3.73726020956955	0.204718366693542	1.08671634030638	0.188382523663742	0.85057679853149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	1.38572824442771
Merged-chr16-39053157-2	7.33407319512663	-1.50604642152004	0.79481945376744	-1.89482833413474	0.0581151481127566	0.653136112898819	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78520874971223	1.73617258608874
Merged-chr19-3378382-1	4.84328124924127	0	1.36361664972082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86598857-2	3.77878319307303	0	1.44352874555222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161556886-1	1.81142121016525	0	1.44321547936273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78895586-2	5.3648487875294	-1.61858310267127	1.16924806818928	-1.38429401485165	0.166268445937076	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0.465515277017237
Merged-chr8-125376229-1	3.121857606552	-1.70183298048535	1.38441479305	-1.22927968483785	0.218966961376376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr1-191177883-1	2.34392541263556	0	1.4403945784945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69080488-1	3.23437265486554	2.35113263569579	1.18893007710214	1.97751968848022	0.0479829172645526	0.574010431246438	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.44422453547533
Merged-chr10-95138973-2	3.00961205503904	0	1.49646979271047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164078165-2	5.39714093105174	0	1.39959940309303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166442229-3	4.13594458069507	0	1.38805893631407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47370900-1	1.77615800004655	0	1.51637991249843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118119807-1	1.77841445003263	0	1.47984985258131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173477666-2	14.3391381019785	2.33600030897854	0.806627522605959	2.89600868246059	0.00377941943147809	0.100856878191319	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	3.61080119136912
Merged-chr1-91010820-1	1.91050322093884	0	1.5432019720898	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77834817-1	1.86128245783917	0	1.46249433895639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47426907-3	7.9501137449723	1.78718225762879	1.30823998225338	1.36609665036414	0.171908629529194	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.97019877533161
Merged-chr14-54902345-3	10.0080397222604	1.56591215925872	0.667770100834155	2.34498693083539	0.0190277465539482	0.309732659387901	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84022605426951	3.5595214994184
Merged-chr2-104105441-4	11.9040539359178	-0.699308079094781	0.461020286299649	-1.51687051497828	0.129299379208918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06158527057453	3.48487569697692
Merged-chr17-17839498-5	10.1636468783405	-0.694852969569024	0.698533462190218	-0.994731114799205	0.319867057156574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22686136056015	1.41437199749648
Merged-chr1-173491248-3	13.9535371029835	3.02269597010489	0.897778774630843	3.36686058472232	0.000760291140320521	0.0290229396746371	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.60868416784985
Merged-chr11-43451493-3	4.77959377055343	0	1.37950035102108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27725171-2	4.41444987044711	0	1.39160809815159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52098560-4	5.47247952986358	0	1.36964257908251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38760861-3	7.46047380694402	0	1.36488423438946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134987718-2	4.50579159403318	0	1.39613306329652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-114622727-2	3.73888720907207	0	1.38052272319721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103375700-3	4.14272917062858	0	1.39888112951972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26380861-1	2.9681901094116	0	1.40149633611621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67416021-3	5.37051805878059	0	1.40763627997176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28065673-3	7.15480261479977	-0.571644570870301	0.783279809704235	-0.729808893052092	0.465507007792839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68089718199588	1.46460328489499
Merged-chr6-33980974-5	11.0651532409818	0	1.35483368468476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172451252-6	19.0427488987473	0.390446875778804	0.412498887435098	0.946540433615683	0.343873009306372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89507289297894	5.16391408112449
Merged-chr4-83274352-3	5.63805199424805	-2.25981807782982	1.2177904023204	-1.85567078991912	0.0635004967445487	0.690703517768888	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11812572528152	0
Merged-chr14-62342854-1	5.21296375816703	0.912222346010619	0.925035578643062	0.986148389393586	0.324060301107766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45391938817053	1.5254723561935
Merged-chr15-101247003-5	15.548018367109	0.853529818827245	0.475369636163273	1.79550765109046	0.0725728548424136	0.748716609675225	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40619412439842	4.10969953676684
Merged-chr8-95302592-4	11.4669891142965	-0.912197570224819	0.698457068650255	-1.30601809498129	0.191546404118331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51028952381843	2.88585936653375
Merged-chr12-80327101-3	6.8960995950249	0	1.36809009507206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108696059-3	6.57106801748642	0	1.37390014858115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140767840-4	7.22505401120673	0	1.35503730216421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66128880-4	5.80328806845	0	1.36342663159174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-12184585-2	4.35251751737944	0	1.45257264825725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83086092-3	4.9805547227575	0	1.38610947357584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21039529-4	5.25002454967339	0	1.37188831880397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22923638-3	10.5319290438782	2.20547710368453	0.648577042974472	3.40048592156435	0.000672661996358758	0.0268280177965452	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04828035860944	4.28860148558498
Merged-chr6-50075462-1	6.78739600748485	-0.48592918690184	0.694275694506201	-0.699908106746346	0.483984694351663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96183740706295	3.36509660604641
Merged-chr4-72168680-1	1.57102707227378	0	1.51216749147938	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99438019-1	4.00207669179721	-0.295454619643891	0.957626822198873	-0.308527928411067	0.757680652242805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05402110133586	1.84252025419888
Merged-chr6-142708638-4	5.67115102261739	0	1.36992122643809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33566326-6	12.5118181157229	-0.447254695277355	0.614507547355012	-0.727826203603921	0.466719981909425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8319800814966	2.66772613423126
Merged-chr7-64409041-2	5.24262438212553	0.317730342980266	0.882377610897564	0.360084321107227	0.718784077408653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97634481356229	2.23659438538296
Merged-chr1-88262432-4	8.53944733690628	0	1.36177694887391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52089590-4	5.70249397498675	0	1.387867856308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38761471-4	5.01051452569879	0	1.36225998141861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124066709-3	5.7554571772144	-2.42009366155583	1.23086990447389	-1.96616527283625	0.0492795224970404	0.584122451682647	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	0.303163067301871
Merged-chr2-101778617-2	8.9528502973275	-0.454654313708648	0.719657178048547	-0.631765134256713	0.527540359470296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57374258684139	1.83064801361452
Merged-chr2-93199069-3	5.04370246834511	0	1.36588661072527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75731804-5	28.2737557455866	0.767606693427489	0.364748620479704	2.10448141631889	0.0353364740067689	0.471259909355728	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16432879026862	4.96709362777727
Merged-chr3-20005795-4	5.47433205121735	0	1.36999358762769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24040833-3	10.7714127225004	1.2459484469051	0.746835829029659	1.66830299039605	0.0952555946077615	0.882412894901722	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45795114796949	2.34698987410454
Merged-chr1-23202833-3	6.68209283965977	0	1.3797795775459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40762300-8	27.7148892488338	-1.33653001141688	0.361167913249151	-3.70057793726233	0.000215108998876274	0.0110730208995411	C57BL6J_F1_Control-BALBCJ_F1_Control	6.03312431562861	4.64843644079772
Merged-chr10-119079475-4	5.23732894635621	0	1.36724452823316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170967709-4	6.50040703023691	0	1.36102648191054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65480633-3	6.94802505775211	0	1.37080261038048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95873582-2	5.75815183559785	-0.981477742896864	0.977012691869024	-1.00457010545001	0.315103898159204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	1.06633037676026
Merged-chr14-103011948-4	6.71191615952246	0	1.3595211944588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44372369-3	7.86638161508453	2.44931361703751	1.14056798808261	2.14745078121561	0.0317574115773742	0.43848136549009	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.56163052678955
Merged-chr16-23181775-2	3.5496722685683	0	1.40021219524256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113402876-2	10.8456044857039	0.443090150807107	0.615951714821869	0.719358579812131	0.471920010764513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9868467483527	2.67646271703818
Merged-chr15-63494746-2	5.64278039572743	-2.59975964240571	0.983218799508694	-2.64413134055694	0.00819008695305894	0.175692555912127	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63732062367281	0.724326877898254
Merged-chr7-80883194-4	8.28331008255743	0	1.35602051582564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182928064-2	3.30256102607071	0	1.42183789423175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112273672-2	3.78392540028489	0	1.45213312612546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31397919-2	4.29136044900766	0	1.41945412778731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55392513-1	2.65779517230536	0	1.39470617242878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118606845-2	3.16473454448655	0	1.40922309986769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136462853-9	20.2634486164924	0.0971691365238573	0.436140873038975	0.222793006871369	0.823696610938058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18031570894871	4.31969711868702
Merged-chr5-122303537-4	7.862124127705	0.596721299105978	0.707030098032838	0.843982881020524	0.398678971800149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.37618163600509
Merged-chr14-65071026-2	4.48878055506203	0	1.39488135898408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58630634-2	3.87536697890336	0	1.41940281238715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180344953-2	3.40016742852278	0	1.38768099902312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93839257-2	3.35063113739249	0	1.47871104507361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119331562-2	3.28215717803551	0	1.42335080034315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-84348065-4	11.8307910321635	0.079832998524261	0.824139804192891	0.0968682717642115	0.922831005743907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84231959469675	1.62069611143677
Merged-chr4-8863918-2	3.34054619353184	1.79891488706894	1.2576850294682	1.43033815694665	0.152619988416223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.18984215491549
Merged-chr2-173356197-1	2.50594695864324	0	1.43706184863301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-24499684-5	10.6188642831211	0	1.35176672937298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-8370492-2	4.21923073714379	1.18169145563832	1.22956109760751	0.961067699634985	0.336518129194695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.14143228603163
Merged-chr16-13863619-2	3.1972291394973	0	1.398751785849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122292652-3	5.21742632104621	0	1.38066726699154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-98350776-4	9.62413981753703	-1.79547345994868	0.628601718814861	-2.85629740773504	0.0042861344033816	0.110218704917411	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13514734354975	1.64474942565565
Merged-chr6-135183110-3	10.3961941380397	1.88175618829965	0.54385757250148	3.46001652536434	0.000540142238289808	0.0227609239776711	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78618705426277	4.36597959465912
Merged-chr19-25622708-2	4.27329186740592	0	1.40959814922859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50565330-2	4.88520099697823	0	1.37239984851791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103419835-3	8.64949140966906	-0.0514593048989932	0.641601165596018	-0.0802045065663026	0.936074605989715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4873954172117	3.05072755119371
Merged-chr13-105316208-3	5.92907906503204	0	1.38096392660726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114193849-2	4.37200849205699	0	1.3786513083371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117362160-4	5.10500389474895	0	1.36811303795776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60974125-4	10.8550748421816	-2.12734185048356	0.895335060618146	-2.3760287562232	0.0175000989216257	0.294412169074043	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37816961274976	0.723581231604105
Merged-chr7-142982037-2	3.76165207861183	0	1.38948759867594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124663189-4	5.16829555372222	0	1.37667050534947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123005250-3	3.95483132437691	0	1.41597581753392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38581308-1	4.01581652772903	0	1.40443076905461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71867592-3	4.70688854434858	0	1.39613159950961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97867005-3	4.92788736250796	0	1.37666355744308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89299604-3	5.86033312289111	0	1.36567530293451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78164123-3	5.39128248839539	0	1.38366523834734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22693331-1	5.71957385730796	0.589540386652187	1.04770401274174	0.562697459857403	0.573640914245468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.44790810950236
Merged-chr1-154112653-1	2.3700757617616	0	1.44234627551995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44952155-3	6.43384906234738	0	1.36952108668141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4569309-3	8.75423478422059	0	1.38566109594688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81210739-3	8.66420385363653	-0.189115147105598	0.640524629963332	-0.295250390475107	0.767802610708952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88949676251831	3.12525573160321
Merged-chr10-19687934-4	7.94825633037155	-2.95596195781465	1.17422925506077	-2.51736357706543	0.0118236748390246	0.225754527774688	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	0
Merged-chr1-54896854-3	8.64905328896753	0	1.35740409906901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79511760-3	5.29329998985698	0	1.37519867742037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106394580-3	6.02185288693282	0	1.38758930643687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75740788-6	16.9491352173478	-0.0161818406093375	0.449938350662767	-0.0359645728920447	0.971310607405065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38045511992341	4.41428099593345
Merged-chr16-30790230-4	7.14606151253579	0	1.38154911654662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50124917-3	9.71102344960046	0.133363100220511	0.904044802902437	0.147518242229089	0.882722982031068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.33175291456033
Merged-chr8-75103417-4	11.3951959670026	-0.147286138963859	1.16265019157537	-0.126681387085388	0.899192578089825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.577068348605183
Merged-chr10-17175616-2	4.73184713332597	0.0997732446253605	1.00973072729824	0.0988117345822741	0.921287751244126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	1.35418021299255
Merged-chr2-90547520-4	9.19299638177413	0	1.36673526379692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118664737-4	6.84453038484911	-1.82630756432953	1.18248364986152	-1.54446749817082	0.122475119150179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.41385117919798
Merged-chr1-161479927-4	10.2998337067789	-1.12820883497056	0.665726880273794	-1.69470223961298	0.0901319206097178	0.852231879009158	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88338859082526	2.11642553550219
Merged-chr6-29825496-4	6.73923964150724	0	1.35316117491234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34220922-3	7.61170461647485	0	1.35823396895534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52573711-4	6.21561898044248	0	1.36148046786174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12222180-4	9.91738571419039	-0.896681149660009	0.664390191558688	-1.3496303242472	0.177134592120885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83397206789463	1.81833865541482
Merged-chr11-70306265-4	5.6776411625148	0	1.36362220344559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79224853-4	9.50592543904905	-1.16433089259161	0.866415026805144	-1.34384891370711	0.178997248576815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42614148764585	0.897114879832661
Merged-chr17-17862513-5	24.0420971958772	-0.842027057806625	0.421324124916929	-1.9985256196109	0.0456597052447334	0.555136639990709	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94410106773797	4.05157303513536
Merged-chr18-38186040-4	6.53916297193596	0	1.35896563232539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76312481-1	2.72440947768289	0	1.39738064225762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64318602-2	4.40273556521611	0	1.37480602454518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121427224-6	17.2819130734385	-0.736013846442301	0.573191364425423	-1.28406304093589	0.19911989854277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49885743234506	3.13740203858764
Merged-chr11-58108026-1	5.08922460484029	-1.5702698709181	0.974752643845897	-1.61094189467657	0.107192387571734	0.952103103923513	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74879361603124	0.97908007631626
Merged-chr9-108443528-4	6.32614555929946	0	1.35820603037567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80171517-4	8.70870208025636	-0.0373052964012375	0.765576420973205	-0.0487283769186815	0.961135761221067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12819815355747	3.0936062101647
Merged-chr10-84615714-2	7.659293250079	0.342368808924373	0.658598308904009	0.519844652340693	0.60317185445917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43299288952747	3.14832953384627
Merged-chr18-64954217-7	17.5702604528531	0.205211432435475	0.405060551610705	0.506619150197324	0.612422068890791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57620446094807	4.81983317016703
Merged-chr2-168469199-5	15.584030390015	-0.800780686232713	0.45529429686924	-1.75881993633383	0.0786080974572393	0.786645355242649	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78054923572185	3.95888175280434
Merged-chr6-100675127-3	6.90208195173625	0	1.35194989657881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60662632-4	19.5923514274486	-0.635708837265396	0.396451586552787	-1.60349676688897	0.108825022361686	0.960572215286905	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13218060820596	4.50257327169144
Merged-chr15-97422392-4	6.73230247435782	0	1.36233711402144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17843472-4	5.53082105114784	0	1.38166016194909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19958017-4	6.75440022574752	0	1.39270914652941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10879677-4	5.20561539127991	0	1.37193159177903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60542518-3	9.38717332885772	-0.802937564499651	0.618085544337078	-1.29907190332502	0.193919254337493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15436071963416	2.48884950737885
Merged-chr3-87500341-9	22.6543603868426	-0.366918254087198	0.39594305079564	-0.926694516673252	0.354085165310829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59430876261167	4.15818046942205
Merged-chr11-111523633-2	5.30928289382658	-0.16719452639688	0.729561294143944	-0.229171322188992	0.818735761046577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27601710700355	3.08717075118912
Merged-chr11-70038625-1	2.20289529657814	0	1.46862200026806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67203546-1	2.20707526909416	1.12632103523279	1.5788476510339	0.713381708802127	0.475609588510325	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr4-109564987-1	2.38981597154756	0	1.43384168229838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117361666-1	2.58199423347112	0	1.42330558877192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35138233-1	1.31245797269472	0	1.67117715835742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-41153222-1	1.38520654022168	0.551988033342084	1.6226934949429	0.340167773558189	0.733730185573182	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	0.724326877898254
Merged-chr2-154594100-2	2.56408437087924	0	1.48484623381231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114872953-1	1.91782733759573	0	1.4809338422175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55698247-1	3.53078172596576	0	1.40504993048891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63633694-2	3.08858003533554	0	1.47972570185962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4787211-1	1.97143344781176	0	1.58187479112536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118019166-2	2.15809240616878	0	2.26513673683723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58012315-1	2.5442376512518	0	1.44546804808335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137510339-4	10.0081996026584	0	1.35645999334154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108828037-1	7.7190030823925	-1.47291764783886	0.668071635655489	-2.20473010561762	0.0274730392365855	0.399734191611764	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08356405418095	2.1304360554358
Merged-chr11-54427774-1	2.17043899175656	0	1.4440217494744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-96116298-1	2.23193764805401	0	1.41108916500659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40454644-1	1.91232675236496	0	1.46012349703364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140841164-1	2.0016667805892	0	1.78055464171981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76702539-2	9.14325404701508	0.462714471312	0.851074614596312	0.543682614163599	0.586659898380209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04845038512503	2.86258092875134
Merged-chr17-8232302-1	2.87468260703763	0	1.42590519000495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77445157-2	8.81785156718087	0	1.37302809208474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115502006-1	7.58779985293765	-1.51617383568598	0.810460107635732	-1.87075689648556	0.0613787845594008	0.676721539698992	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68108943348294	3.06861164741368
Merged-chr9-99339464-1	3.42684745710918	0.656217648519909	1.41190708469981	0.464773961141663	0.642093336642381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.723581231604105
Merged-chr4-9246573-1	3.0929525901037	0	1.45461785132732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23034931-1	1.44415643498206	0	1.64305378612185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108458862-1	2.59619961780922	0	1.40675946605298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169089282-1	1.68073980945194	0	1.43853826628477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-49051038-2	2.6100383458263	0	1.50706054899746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79493057-1	1.90107474566408	0	1.49868778559553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43766511-1	1.07425839813589	0	2.44686080276196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9655150-1	1.78180423897571	0	1.5079426867328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85272146-1	3.57821785626111	0.307939570813156	1.13372888086088	0.27161658842044	0.785916843118442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.837303648891292
Merged-chr4-40018372-1	1.63819965070637	0	1.5473515156042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81149993-1	1.72598740421201	0	1.53831895581413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51835334-1	2.23865355688634	0	1.44175274714572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139616359-2	5.81638942526516	-1.28364703254673	1.3489279464128	-0.951605336638132	0.341297174027841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr10-24191593-1	1.41893330478955	0	1.60626596697791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57714452-4	3.92742626509518	0	1.39610533184176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46607010-2	8.53058074427845	2.69563875445367	0.670919319963273	4.0178284843567	5.87369237901123e-05	0.00377855673409078	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37544986530815	4.51069575284356
Merged-chr5-108634220-1	2.48117147349251	0	1.4274400024133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93967726-1	2.7032894442371	0	1.46658671674622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72697518-4	5.46151898530788	0	1.35572388545875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70194116-1	2.61419697592487	0.710464865840011	1.18293018089356	0.600597463244482	0.54810812797971	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.00454747091412
Merged-chr11-8718268-1	1.75906866806659	-1.92180407628067	1.56415561952154	-1.22865273269199	0.219202035268641	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr8-40321251-3	12.7330448396674	0.75222792910694	0.416216105657504	1.80730134870354	0.0707153058727776	0.735966092793786	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05217014368676	4.9993168875308
Merged-chr7-120901866-3	6.11406217650397	0	1.38442675673917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43378411-4	5.38695284596959	0	1.36419937417472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95779990-3	8.58469097214349	-0.421161594205138	0.843205737413041	-0.499476670423595	0.617443618046743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8131505516485	1.39949824061849
Merged-chr7-78864633-4	6.62097265454668	0	1.35931177673318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-26689915-4	7.49938690406017	0	1.36123147285874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123941080-2	5.99348174028293	-0.29185920399193	0.787470126655768	-0.370628921799737	0.710913937429312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25795226179178	2.21347085688945
Merged-chr5-105822715-3	8.436832125907	0.326524749078605	1.04857916975526	0.311397325539868	0.75549858681927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	1.18909650862134
Merged-chr19-34444992-3	5.94405026963737	0	1.38375781866826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-86020486-3	10.5823720551163	-2.13143025942357	0.685825849795821	-3.10783015842596	0.00188466343361031	0.0594938557419411	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89236216513096	2.86099001119595
Merged-chrX-106135725-3	8.50759775461443	-5.26350513433048	1.01802092741401	-5.17033097512144	2.33679750009186e-07	3.57819648753503e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06334161291824	0
Merged-chr1-64485515-2	3.46204464804666	0	1.44252892838382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52949483-2	2.51431041722398	0	1.45235123842473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9865874-3	4.86087718437636	0	1.35560526250343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90740837-4	6.11387334553904	0	1.38418868321894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43469709-6	14.715740753744	-1.21707292185635	0.610529769164506	-1.99347023409176	0.046209979806235	0.559449508304483	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75578428719024	2.80924143650366
Merged-chr19-9071643-4	6.56999846631108	0	1.35941910033666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146422002-8	20.0919301759415	0.791981608352311	0.482419707763791	1.64168585073662	0.100655125455351	0.914662648717388	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32652681610041	4.59223309377519
Merged-chr11-31852117-1	4.55488019095698	-2.51403988036934	1.21372516777076	-2.07134197026405	0.0383268497095472	0.494519160541485	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0
Merged-chr15-74929033-6	24.0488713981442	0.769010776448093	0.342152617043087	2.24756654820867	0.024603842647793	0.370072020611893	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34063447954243	5.21305196945044
Merged-chr1-91099110-4	8.18443609661681	-2.10900835205516	1.13584599926184	-1.85677314831918	0.0633434354821472	0.689622633561795	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.303163067301871
Merged-chr12-91676129-4	7.60967268610715	0	1.34453241139292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59836295-4	14.0048660358988	-0.565850878517306	0.412185663274238	-1.37280582255679	0.169812720174244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62495482701239	3.9952900499185
Merged-chr9-89220975-4	8.20213500482727	0	1.37418668913382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117808301-4	5.29404733376762	0	1.38237372102001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53485444-2	3.90650752844166	0	1.41494552158472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79499514-3	4.76899342883033	0	1.37528410013811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30784391-3	11.1033982880707	0	1.36451929767506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59169922-2	7.80265242657214	-1.85225766543478	0.636499977302986	-2.91006713508973	0.00361351127398989	0.0978221411069802	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9197993999415	2.06239089973625
Merged-chr11-100611840-4	6.13162312231671	0	1.36213245798193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116943374-4	8.16409410290218	0	1.3543845665398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29807571-4	4.40360677947025	0	1.37585536727358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48267756-4	6.6776672943765	0	1.38048675178368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72350426-1	5.1511078389626	0	1.37110933343701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93521514-3	8.15144454667542	-0.135264761335049	0.720780652600943	-0.187664251040791	0.851139855845594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26132114800432	2.62183034664502
Merged-chr16-94517808-3	5.3510878432954	0	1.36676300816664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39603518-3	4.0746776217313	0	1.38490803690634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118737365-2	3.97156096653685	0	1.43174899392597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51818429-2	5.59463408891657	0	1.36024180595985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102338014-3	5.89824146090785	0	1.3853878126765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74710297-4	13.9009648367949	-0.812560177642013	0.606608992985629	-1.33951225095218	0.180403968900803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17013828566755	1.67656321522231
Merged-chr1-172000827-4	4.87306249323806	-0.695286573452525	1.37410589359107	-0.505991988459836	0.612862273848881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr11-51935258-3	5.71760101503477	0	1.38382414177321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117221080-2	4.16640541618177	0	1.50470606615379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88239481-1	3.78341837097926	0	1.40904456289603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32087819-3	16.8059478089497	-2.23575501135725	0.649202789451715	-3.44384689604531	0.000573500361626946	0.0238061211838687	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3893332151078	2.40527168398353
Merged-chr16-36724358-2	3.92989985587625	0	1.3786423853552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67872006-2	8.00053893174722	1.51502626850079	0.7420833383181	2.04158507578749	0.0411927069434446	0.517732799245943	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72791372237238	3.10438605589178
Merged-chr18-34119201-3	4.85566998163558	0	1.37333925491904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65561267-4	9.18291695949691	0	1.3677567326466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-27280181-2	2.67682773404082	0	1.47681789462541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113859136-1	4.36703114338263	0.0624760242673758	0.960759768717148	0.0650277273275054	0.948151923755565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11051826775391	2.22590269144367
Merged-chr11-77624575-2	2.67193607749106	0	1.41154244767925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100004824-4	5.3046993714994	0	1.36275304115701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64867066-2	3.87887231170493	0.623807725679349	1.37323696557274	0.454260802263779	0.649641125104844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr15-12424375-2	3.43437373445981	0	1.39532276482921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54246120-2	2.57026986597766	0	1.56789561935805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109550777-1	3.52542973948423	0	1.37405788280004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125483604-2	3.71071717350865	1.61968930274337	1.40059687118691	1.15642790303451	0.247506173796185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chrX-163301599-2	2.28380884263791	0	1.46429556533504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58034731-4	7.25221802612385	2.22934176524874	1.15488439382943	1.93035924388636	0.0535623411229263	0.618435705416557	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.70340695421451
Merged-chr15-88828865-4	5.79920582379519	0	1.37321333197883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4158404-2	3.70164546083038	0	1.37917713649305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70847825-2	1.96691268333339	0	1.65524756751622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5508058-4	9.7990405526047	0	1.41234030880179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43177614-3	16.6426083343549	-3.25767983907164	0.756354441917811	-4.30708099077395	1.65423053044109e-05	0.00134012395535391	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39205735087858	1.06872581468896
Merged-chr12-103325658-3	5.81881878537952	0	1.36597037838373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40730876-4	11.4783358613863	-1.95579508245973	0.752110447311696	-2.6004094072226	0.00931126003364977	0.19118607246846	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20824388900399	1.85923366353412
Merged-chr14-63409385-4	5.18378162785491	0	1.38055410621553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113669891-5	9.7502905087684	0	1.35413560907171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96266419-4	7.7707139761577	0	1.35789819113842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34885045-4	8.72444550969351	0	1.35766675573923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74773436-4	8.09881061683966	0	1.35708201485897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88876502-4	5.620346186684	0	1.38079721431294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45436923-2	6.01980426000724	-0.392419584485236	0.777051280588594	-0.505011180456442	0.613550983252617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44575596919856	2.05565211658267
Merged-chrX-21690975-2	3.26370299246368	0	1.42341929720484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40564436-4	6.36677166345195	0	1.35458365408633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114706471-4	4.64441585079463	0	1.39058622561104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117718967-1	3.18927756260724	0	1.42696909033876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65990762-3	11.1429156777008	-0.286050940107808	0.506191861381395	-0.565103791529118	0.572003169754329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08932793089114	3.65997329560551
Merged-chrX-167302210-1	4.32197392505283	-0.390588707001271	1.11901709901245	-0.349046236510569	0.727054598108838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.723581231604105
Merged-chr7-114530696-3	4.75040914166055	0	1.37515987261868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68257538-3	6.72603275029118	0.487933296579654	0.81443764303192	0.599104548708256	0.549103168565571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	2.27026908475276
Merged-chr11-90220276-7	13.519725794951	-0.43036838244483	0.50401394801497	-0.853881889856045	0.393170434947529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92789308290527	2.72261531950883
Merged-chr5-102052998-4	13.1722088459389	0	1.34187316260287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11903622-2	4.7425646245038	0	1.4154254397294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12006357-2	5.46920346866368	0	1.35958891490784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11001368-3	5.40447147656143	0	1.35657338360058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136988704-5	12.649121660465	2.97360256510868	0.758457516636991	3.92059212267243	8.8331660263345e-05	0.00531152734541501	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	4.61232369152986
Merged-chr13-52962597-3	6.57793003451841	2.63748183874173	1.00638176284321	2.62075679043544	0.00877348275523387	0.184390231031534	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.89333650194759
Merged-chr18-63653547-2	4.55608213092673	0	1.36976036833418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161594844-8	22.0050775592675	-0.545918210025671	0.408439285509918	-1.33659574236136	0.181354629556817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9870057561866	4.47825267473705
Merged-chr4-40251140-4	7.02377430786824	0	1.35795649714709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3820801-4	4.99157924638694	0	1.37302889479449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25556422-3	5.35058060550943	0	1.3584435643573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12047254-2	3.60972011162196	0	1.45611310365885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119167807-2	8.43692261645217	0.880352772387714	0.692211511452425	1.27179735936567	0.203445127444663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91665652935043	3.65515115285111
Merged-chr4-47312841-3	5.60423733845486	0	1.36635120758526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69063610-4	7.30126346630338	0	1.36701252034542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24193028-4	13.5895896585575	2.37441490974293	0.699428436651682	3.39479321302659	0.000686804532462554	0.0272710062674448	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85073157931653	5.14536092490742
Merged-chr12-102461429-8	28.6794923808099	-0.19444878605295	0.441231134672191	-0.440695977171725	0.659433109312972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.25581771228791	5.10185586533311
Merged-chr7-122396150-1	2.2774456395332	0	1.41188960704423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80038254-2	3.6467192339105	0	1.41864553434453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135586949-1	3.89530446682643	2.77908655322076	1.11158901100156	2.50010257902492	0.012415735040675	0.234261347128098	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	4.41998945032895
Merged-chr2-156869199-1	2.0977592305211	0	1.51362740669502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118702771-1	3.67045023750418	0.292791735273656	1.0271009564076	0.285066169442318	0.775593448030595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26637849737819	1.51436894928421
Merged-chr13-107885183-1	2.62826212478572	0	1.39647267168915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83739873-1	3.32660836155647	0	1.40817587243671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3699934-1	2.28892971290186	0	1.51481042146663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43754101-2	5.67892577876045	1.82892877303973	0.789907329662198	2.31537131554643	0.0205926199324745	0.327116957016184	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70922859466063	4.11938840666579
Merged-chr8-128652444-1	2.38183756988249	0	1.39574427904408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73449276-2	4.01518084591288	0	1.41463619015183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176074732-1	1.79560780181484	0	1.48665665084031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36471655-1	1.76571988423354	0	1.47350470980329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59006332-1	3.74220638953666	-1.17756599758945	1.25138649881553	-0.941009031745226	0.346700230789282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.716426531808663
Merged-chr4-53210875-1	1.94018034322188	0	1.48233375552371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-54115098-1	2.83014462995394	0	1.42879167284748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40502808-1	2.21804404425593	0	1.40948982162113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-61994081-1	2.06603323162202	0	1.40701905107707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67123930-2	4.82075827660177	0	1.36817038692853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133624609-1	4.19747698627784	-0.942129411720384	1.03363134197692	-0.911475275041944	0.362045007306366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86672829431885	2.56040540545588
Merged-chr1-55520983-2	4.66638212658283	-0.54042311755424	1.10587078703729	-0.488685589572427	0.625064307493144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	1.18909650862134
Merged-chr8-26239875-4	6.15982074857435	0	1.37473709752643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84224628-1	3.76826078842624	-0.71528892468075	0.841361838068005	-0.850156130593285	0.395238288115006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56584984784169	3.20259243674241
Merged-chr10-70183366-1	2.46925892677217	0	1.4137379055532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119517984-1	4.17193953194585	-0.113936013950317	1.2153351432231	-0.0937486376376447	0.925308833130896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39678931361802	2.33066667916394
Merged-chr13-8709271-2	4.83035037792846	0	1.38924908025866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38940715-1	2.40113681839395	0	1.44179170712552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154090042-2	3.93379941670675	0	1.3792491411448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43474504-1	2.96829699885371	-1.93021292896127	1.23276994674655	-1.56575274572143	0.117406512762793	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58458601743443	0.601513806634888
Merged-chr18-36483367-1	1.7678986921318	0	1.57319872856768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116163752-1	1.61746331070822	0	1.59600725546903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146432724-1	2.73734626416615	0.615318676168861	1.45961769913949	0.421561533908241	0.673345088054585	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr8-8973557-2	2.33662750948698	0	1.4544236457271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98998150-3	3.83768128939572	0	1.36878924805635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193931527-1	4.89627770352293	1.82244387904783	0.843503974869387	2.1605634749143	0.0307290754199842	0.429559968816266	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	3.65956852370107
Merged-chr12-52002393-2	2.72098211208348	-0.0363283650640794	1.30739303951634	-0.0277868735460904	0.977832135314224	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.724326877898254
Merged-chr1-105863166-2	4.63786880876354	0	1.39118243376315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5296188-1	1.77638099467073	0	1.48602623227827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30843213-2	2.57250254100509	0	1.48508724039178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152922123-2	5.43792216338945	0	1.37835538741836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4983426-1	2.15855517209418	0	1.48236409382037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99428470-4	7.83359750266963	0	1.352651343997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-98401597-1	1.69956286578133	0	1.55101352715084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69179895-1	2.12678434826213	0	1.44301321841937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37998338-1	5.75731939535327	1.05685170636461	0.778002137126716	1.35841748490271	0.174331249211894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	3.17861982858377
Merged-chr2-129544822-6	19.0438376878549	-0.0587037349459711	0.518448571762974	-0.113229620338909	0.909848513036057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08359686155196	3.63689345507734
Merged-chrX-107143393-3	5.60962380405821	0	1.36139369167039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147871638-3	7.28126605891229	0	1.37814407941671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-130937044-2	6.11638579857294	-1.14515171097878	0.630983790395343	-1.81486708281568	0.0695443382323833	0.729095599223554	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27979766758479	2.46652732427062
Merged-chr6-146825151-3	9.26356638605352	0.161221300248307	0.584805716305882	0.275683523182219	0.78279115199198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55156493172897	3.08896859695644
Merged-chr18-67490956-4	11.5882400020823	1.66591347557377	0.982013078925118	1.69642697365826	0.0898050490359309	0.850273659500924	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.60401468765691
Merged-chr4-133650216-4	11.7883083762228	-0.237030924153134	0.45600045965698	-0.519804134257753	0.603200097534718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86563237271276	3.68768464315216
Merged-chr4-150508889-3	6.12290811846762	0	1.36701807910972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31507575-2	5.80349817991597	-0.618366624813914	0.991750404695111	-0.623510332727331	0.532949214327376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	1.14143228603163
Merged-chr5-105393570-2	3.980845541657	0	1.44393054294017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12873855-3	5.36143761247334	0	1.36931372011234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38074323-2	4.20143343552881	0	1.400301826773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113751334-2	3.79793754024664	0	1.4287016041248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110014473-2	3.29499329550136	0	1.43038214803844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95670049-2	3.70138706707076	0	1.38422067559609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100083855-2	4.832165463281	0	1.38460497156554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84853086-1	5.05966684652316	1.34060081115825	0.80309949818503	1.66928358713703	0.0950611913783169	0.881814215381216	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26637849737819	2.63928801137446
Merged-chr16-95705513-5	17.0128544118844	0	1.34002571245143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123423062-4	5.22302442380757	0	1.37685740856831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14552339-2	4.85491269981525	0	1.41295872356016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32547762-1	4.43960809718584	-0.351114272644185	0.759150889507446	-0.462509202711988	0.643716204425992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61314253431055	2.26514073885225
Merged-chr1-135740451-2	6.71609545645795	0	1.37527043596946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135235829-4	16.0614024448537	-1.21391787237353	0.482783783279654	-2.5144131066854	0.0119230680084876	0.227253174569908	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86464355160803	3.0522097229242
Merged-chr7-97376083-7	14.5755196513624	0.563715615390694	0.5290556050903	1.06551298193784	0.2866438540588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96818747574366	4.18150992176831
Merged-chr11-110496238-2	10.0211451877227	0.0471695874650719	0.653914071327604	0.0721342291492615	0.942495086245537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44857983344985	2.86198534873827
Merged-chr2-93913749-3	3.58663157331153	0	1.50555343626431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86100858-3	8.54940548836512	-1.20350807118516	1.002247481966	-1.20080927399725	0.22982519359108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45795114796949	0.903978167044898
Merged-chr1-164316884-3	3.90004971322022	0	1.37645288782567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159909688-3	4.12741356011686	0	1.44787220843783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150155641-2	3.43212330821625	0	1.38093053875793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69217332-4	5.25772927701286	0	1.39356091380598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85952084-6	15.0113589053313	0	1.34824746492663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156010205-4	12.5717532644566	0.292028032911117	0.65511271321535	0.445767616808744	0.655765115974153	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22772873920999	2.33877259814021
Merged-chr5-105779413-2	5.27126579363777	1.17420642058487	1.43730753749491	0.81694862787083	0.413957786511914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr16-34573695-4	5.89855606903463	0	1.36423757267362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74938805-3	6.67926210531617	-0.864020760014414	0.684329099008016	-1.26258076891203	0.206739882739118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87953453866007	1.99631334303834
Merged-chr2-104690903-3	7.61566671650488	-0.194425504226036	0.683503129887494	-0.284454446109177	0.77606213941687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49975101303765	2.03925338927869
Merged-chr5-34105831-3	10.3813182252927	0.498561195268427	0.611520708538352	0.815280968096862	0.414911500207144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69918556799792	3.61036231402739
Merged-chr2-128776710-5	14.606230511706	-0.68904980461644	0.4590274725702	-1.50110798545083	0.133327633740915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61546893561596	3.26229823847357
Merged-chr5-105148253-4	7.58018398197842	0	1.38397790723137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144932961-1	6.90898981668171	1.60843640700469	0.870076683873162	1.84861453802521	0.0645134919406482	0.697333248837084	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27256041875316	2.67651213481576
Merged-chr13-94062930-2	3.47329302485588	0	1.41083738890872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55148660-2	3.45285829907045	0	1.43515066833527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84355465-2	3.40604445439861	0	1.39370133043191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142879527-3	4.2656972792256	0	1.37101248711418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58454669-2	3.96602706189727	0	1.40227372156714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20829109-2	3.31944482971177	0	1.4054643579552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24323587-4	5.46471374530926	0	1.36818285668107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17622096-4	12.930740802029	0	1.35653648357349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97715646-2	3.35302222776161	0	1.38637413288869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6465345-2	5.11921447018856	0	1.38528479719979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18884488-2	2.82834441780477	0	1.41005190182389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45394356-3	7.90027355098138	0	1.3723560186332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25735584-3	5.08384584916819	0	1.36820151712434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57404327-3	5.42106999423185	0	1.35504435475504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21016802-4	5.5582230826967	0	1.37347367184526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102779736-4	5.152740755744	0	1.3595486331329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116804683-2	3.069352156847	1.21634245030777	1.38647396540001	0.877291951137969	0.380328082909766	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr18-5340773-2	2.54622862362853	0	1.40642163378538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66990235-2	2.58610176659878	0	1.44483474515853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70253224-2	2.1923123335602	0	1.44665763098234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137705389-2	3.45066774378048	0	1.39079199809856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108722870-3	4.59919810830558	0	1.36220832376418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115485849-1	3.70351965138823	0	1.39155304411072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103934841-2	2.76063217395125	0	1.41470855891273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22807599-1	3.41188413256333	0	1.3902538584726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-50805818-2	4.47714046647576	0	1.38502454829641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16229949-8	28.8403882530556	-0.71620240811162	0.298179813764838	-2.4019144658681	0.0163095214642069	0.28153994197295	C57BL6J_F1_Control-BALBCJ_F1_Control	5.56219686319554	4.76463144081261
Merged-chr11-79142224-4	5.53905748642883	0	1.35469337319475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127213655-3	6.45341312625032	0.334690785004745	1.07268844030985	0.312011179041015	0.755032027502523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.97908007631626
Merged-chr19-17342533-6	21.7545877105684	-0.547632504929065	0.509556504333645	-1.07472380446838	0.282498402897281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72405299992081	3.78369121342152
Merged-chr1-183803815-11	34.7561754491608	0.548210184736749	0.360985121247355	1.51865036110755	0.128850527465178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31590685299312	5.89683036935896
Merged-chr5-106887700-6	8.68831085334473	0	1.3737443823616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85123681-4	8.30028232910788	0	1.35001012984655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67672871-4	5.12286239090271	0	1.37240177784875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109208012-2	4.63384916873426	0	1.39717488297426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149219894-6	12.0869142792661	-0.0373605524260734	0.640497319883288	-0.0583305367036996	0.953485344145424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30095837608674	2.27435083006356
Merged-chr3-40694682-4	5.37489271703065	0	1.3716689255931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103338939-2	4.18691116055277	0	1.42751173011646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127273962-2	4.27508448789949	0	1.39755090288761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124297483-2	2.84574914266829	0	1.48586963351692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39639224-3	4.22969716243918	0.498600585107655	1.24539791318533	0.400354440800686	0.688895475363205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.723581231604105
Merged-chr1-9813111-1	3.55842885311927	0	1.38537278003403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48100406-4	6.52315259887679	0	1.37915816922634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87015775-1	3.93492914230403	-0.512513128113726	1.24426818790874	-0.41189924575273	0.680413273654458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	0.827114643704772
Merged-chr10-44590213-1	3.88780382968057	0	1.37130335933611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103472383-3	4.98832530312176	0	1.37845828012136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78889859-1	3.2855552347922	0	1.45511184349489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82816192-3	3.67812419457407	0	1.39621818149001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137690920-3	3.30933302681548	0	1.41178514034457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164007648-1	2.63290709083091	0	1.40143421035051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153060351-3	9.1926830416267	0.868067231675117	0.642430574575253	1.35122341001445	0.176623877725269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22955830519793	3.90748771165849
Merged-chr10-83004665-3	6.85505856303424	2.02305847927458	1.1536212040579	1.75365923594193	0.079488914383866	0.790845740852221	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.58383754133375
Merged-chr7-125470090-6	15.0675044915831	0.284165689883554	0.460179769580104	0.61751017464945	0.536898272260737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09471620856425	4.52516537285242
Merged-chr11-9388666-2	3.51320699942193	0	1.39641419396984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148989504-4	12.2644669848385	1.3157828951708	0.822100987521957	1.60051248586495	0.109484939283458	0.963180419891486	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	2.48703731656238
Merged-chr7-122261705-2	5.21144561162389	0	1.40889910120246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145835560-1	2.61807010857562	0	1.45005735722272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44507202-4	12.7482219021862	0	1.3982949249088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93624862-4	5.22541789178105	0	1.38658527444744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164760604-3	4.61835650543574	0	1.38943324509336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55541266-2	8.77531370370766	-0.198235526649126	0.699520730904409	-0.283387636550568	0.776879704716861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46251840096043	2.37740742799158
Merged-chr2-128445047-1	3.30007014649487	-0.428422079368749	1.03963608563134	-0.41208850413131	0.680274554372959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90927269178975	1.25298535761957
Merged-chr2-181931258-2	6.44992696759557	0.620331573530372	1.4095689945347	0.44008599503506	0.659874824895768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr13-20311786-2	3.86542493231549	0	1.3620508975425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127135953-8	23.6534134624247	-0.0482128347626051	0.340567604872912	-0.1415661210073	0.887422728877454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89089735264065	4.91248612819842
Merged-chr14-27344741-4	6.46047555693133	-1.5170864231358	0.948558389587187	-1.59936008135044	0.109740616710302	0.964275773779112	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	0.723581231604105
Merged-chr13-20305827-4	8.37308417454028	-0.0356834790392115	0.787971729283508	-0.0452852275190862	0.963879962090793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.035112151504	2.01161228884919
Merged-chr4-45499445-7	17.3761733450914	0.0944787536767901	0.516294839553436	0.182993798191957	0.854802884779615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17667741462326	4.5296374524615
Merged-chr12-79545250-3	4.45829653151665	0	1.37721321567165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32123702-3	5.02735392116434	0	1.38576917409179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82867310-7	16.815749128723	0.338038294528165	0.459315985345982	0.73596022196688	0.461754905957342	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8182777686027	4.44977092445951
Merged-chr2-129414527-5	23.7263649935242	-1.48945613496429	0.373256843495828	-3.99043222091905	6.59529952636594e-05	0.00414319644011983	C57BL6J_F1_Control-BALBCJ_F1_Control	5.77911236185893	4.317233072336
Merged-chr9-85517761-2	5.80182961249031	1.24036351563859	1.38931326104728	0.892788941425339	0.371970209539772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.71701424649985
Merged-chr4-155505213-6	12.4175597745734	0.0381636813273524	0.550018744468221	0.0693861467653261	0.94468225562208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26571213179415	3.27586133317915
Merged-chr4-74311331-3	4.72024054576853	0	1.39584066784105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25050224-1	1.96131173543147	0	1.48535177414805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89353327-2	4.1974728032464	3.08834910081469	1.17752401059793	2.62274830323542	0.00872236835617538	0.183774892043929	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.86501351763573
Merged-chr8-82640701-2	5.1389196112666	0	1.4125586446003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100974571-1	1.46032976550704	0	2.31344267014091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-101876666-1	1.32450457275561	0	1.77946672647785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45905314-1	3.11058104968769	0	1.46886947869221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102423106-1	1.92291799677305	0	1.5454589546294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64301364-1	4.00076499236927	1.77691001815267	1.28585442484722	1.3818905031678	0.167005324360494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.18984215491549
Merged-chr1-85591280-1	1.76030538511857	0	1.64921525626985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11456983-1	5.10111640357188	0	1.37235445180077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145187991-2	2.93610681840918	0	1.42321280949955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56265285-1	3.2363619805972	0	1.38995890479101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5834598-1	1.44467749144959	0	1.74071268028793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37307317-1	2.65282897385948	0	1.44923637351365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66319499-1	2.58707474227523	0	1.41184215496032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37466535-1	1.70071013536017	0	1.50329661352732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10052659-1	1.92840500393394	0	1.5237937632583	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117393014-1	3.16932762717994	0	1.40346037756088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166630977-1	2.25073451934466	0	1.42385582328758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120902646-3	5.37608576506361	0	1.38559800629327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24964992-4	14.5079445176918	0	1.34984176037457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67839121-2	3.62339810464552	0	1.41635032316651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93444462-1	3.8038467077062	0.722537536578457	1.06229427629921	0.680167024052519	0.496398709652278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	2.78597213134036
Merged-chr1-125527490-1	2.20300685361659	0	1.50313917245496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10921124-1	3.4073918691863	0	1.40296190905997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104693509-1	3.97336655613765	0	1.39362702236378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5890171-1	2.14587906101797	0	1.51675396618642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-171422164-1	2.28515994126186	2.31698921310777	1.96414424670125	1.17964310258736	0.238142192266943	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.15712406727239
Merged-chr13-113266716-1	2.82399027519765	0	1.42016865678792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32391441-3	5.14071561787426	0	1.47002550500733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59853386-4	7.93062918615449	0.57844047766031	0.614865673143003	0.940759100607294	0.34682832457105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47534738876811	3.45970840197883
Merged-chr11-70198537-3	6.81239056475616	-3.13557023402533	1.1310243152857	-2.77232787275071	0.00556569456947424	0.133869730576128	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	0
Merged-chr3-41245079-7	23.2786997070476	-0.746625388218785	0.482118467836807	-1.54863469878841	0.121469559753797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54142384333744	3.78890653897272
Merged-chr5-147918461-4	6.30030034552509	0	1.37596862788223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70988250-5	9.65790396465832	-1.85604559146314	1.16823657453021	-1.58875833194105	0.112114963854898	0.975656161236752	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.303163067301871
Merged-chr18-5187020-2	4.35247446805596	0	1.4311398520211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80929224-3	7.70623300247842	-0.0371565669524286	0.747560246546128	-0.049703775881742	0.960358447462215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61076849167644	2.57808039585857
Merged-chr17-71479651-3	8.18310398894944	0.847341773425413	0.651299186517751	1.30100235186202	0.193257649705135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75520908275751	2.71399066802651
Merged-chr9-85375331-3	6.05717317545062	0	1.35491276304998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134180015-4	6.06971782376387	0	1.36894151186537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-67554018-2	6.48379628045266	3.82774586062316	1.12706235471004	3.39621480979011	0.000683247161464197	0.0271495851242926	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.67890752592471
Merged-chr12-8902830-2	4.77101467464987	0.554761789713066	1.25361500273304	0.442529635098189	0.658105990298749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.723581231604105
Merged-chr8-124247634-7	21.9956158489027	0.646558486133423	0.406904231919103	1.58896967742023	0.11206723871151	0.975634693965246	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07509810104824	5.6488834805571
Merged-chr5-113670804-1	2.14393827218241	0	1.4024481772404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34547255-4	5.2906934816201	0	1.36451234477298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4297337-5	14.0093323260534	0.190183457463451	0.537727995500746	0.353679665285695	0.723578963610374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14734463558161	2.70684942540093
Merged-chr7-31084331-2	2.24194079022268	0	1.45871028993987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40815339-2	3.21057590335723	0	1.42272807517388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167850390-4	10.7308729737239	0	1.3534405989293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34647770-2	7.70997873904654	-0.179776948827089	0.570829198279935	-0.31494000196347	0.75280720873055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2649411287479	3.35071466917561
Merged-chr1-78709333-1	2.9897369220931	0	1.44939847146268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80071072-4	5.64405000790626	0	1.38969213486845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101693023-4	11.1802565518465	0	1.36452341926407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60666059-6	13.9029921706996	-0.662330793555292	0.485543768499224	-1.36410110998335	0.172535745493461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42344102410815	3.83614605331017
Merged-chr15-65872760-3	5.71010573434194	0	1.36833517756913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120111021-6	12.8648765350351	-0.91673893138043	0.594468184503354	-1.54211605478318	0.123045394228589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14411736482692	2.71399132875998
Merged-chr18-73823944-2	7.48949350217315	-0.453797183777037	0.934976822202458	-0.485356613127649	0.627423403272664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	1.49169296430729
Merged-chr3-52859595-1	3.38482140957635	-0.034580250518691	1.3662430209466	-0.0253104681879598	0.979807324200472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr8-126830118-1	3.95970394697994	0	1.38423619406862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71996115-4	4.97267078345775	0	1.36388234511746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116807659-1	1.68511849681884	0	1.57848455519403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130456732-1	2.61040858068697	0	1.42730898660796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132089995-3	3.93471788626178	0	1.38599887318441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112739830-1	3.43979611204748	0	1.42363179034167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128517981-2	9.1468823605018	-0.46536588039299	0.592461193023367	-0.785479092762513	0.432172723765703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52160927757765	3.05076990153317
Merged-chr10-75883379-2	3.46061044612765	0	1.3969816935473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122792926-8	34.442380388716	1.04676562163054	0.365881268282663	2.86094346000206	0.00422382372159565	0.109282643351841	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73482870432283	5.99974509661822
Merged-chr8-35663104-3	14.0086893240345	-1.0404647797032	0.616974790571914	-1.68639755724659	0.0917192516315584	0.861248367496957	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36012945549263	3.05184252809907
Merged-chr1-165768468-2	4.65113184552333	0	1.3724116350058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122544421-8	21.7630683849115	-0.26975719071937	0.438303194763745	-0.61545796138852	0.538252323593545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78463631711108	4.56635771746563
Merged-chr15-99416646-3	9.24916660390797	0.930581869180231	0.638940530211936	1.45644520135788	0.145269587768664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39476335534657	2.72856224016937
Merged-chr10-88795410-1	2.78361359364734	0	1.42624681646234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173535389-5	14.1114451797838	1.49218909152828	0.690660048508711	2.16052614415768	0.0307319619331934	0.429559968816266	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36540726817539	3.43610471666967
Merged-chr4-141478526-3	11.7810061043299	0.81780074653307	0.641707045678767	1.27441447314645	0.202516565710477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88554388684036	4.76995134801398
Merged-chr8-83451248-6	18.349145269992	1.06209417508529	0.494513373732402	2.14775622157395	0.0317331264821963	0.43848136549009	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61585580249026	5.01180270069543
Merged-chr2-71696955-1	2.32686299486922	-1.24935430277387	1.4582509657253	-0.856748483038015	0.391583902472514	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr10-117824414-2	3.97719707765771	0	1.38163864408556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20785372-1	3.02514402139959	0	1.39843216236748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83227121-1	4.72563296696323	-0.205361201352738	0.965718415688178	-0.212651222154023	0.831599015559238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97898450809916	1.86501351763573
Merged-chr3-148895906-2	7.70822648158273	-0.543838442046912	0.661564425294835	-0.822049102480901	0.411048951409621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58273794203447	2.64601953476857
Merged-chrX-159834189-1	2.64820918249245	0	1.50957314793284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46372986-2	2.83311860332054	0	1.96355413563426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97343090-3	9.85292655529602	-0.0201782896970919	0.607465224404265	-0.0332171931601197	0.973501387528912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78329753596246	3.18024494077383
Merged-chr13-24515552-1	2.5225872893983	0	1.39796293854878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140552611-2	2.48467023696202	0	1.59326207344531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34034106-2	3.5208129257688	0	1.38442436178542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46043703-3	7.22441203306609	-1.85918729315476	1.27767057890342	-1.45513822095711	0.145630999808419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr3-88242716-4	4.64793420168923	0	1.37052415348481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22963248-3	5.99371758607636	0	1.38702020232139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14239709-2	4.14053364145123	0	1.41034575479055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75837698-3	5.09740070801743	0	1.35690005346038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40095543-2	4.04482415664876	0	1.42610498485092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64296573-5	11.731259857148	-2.08067813739384	0.716919098444388	-2.90224955913242	0.0037049326426333	0.09948551966328	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72139782576509	1.39949824061849
Merged-chr6-92127023-2	4.66484410510335	0	1.42404075156612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120576476-1	2.80733411851531	0	1.44574726193981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61229787-5	12.137354846552	-0.60802116601662	0.511435162446087	-1.18885288040928	0.234497564847436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83286381602291	3.2347640573605
Merged-chr9-42083906-1	4.91714418223616	0	1.37654922625125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105736501-5	8.71856172424064	0	1.34604045464468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122986578-3	7.6500007623131	0	1.36746653953204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24275117-4	8.41331480930029	0	1.40643211895451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84635847-2	4.35335427293436	0	1.38008539291339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133418355-2	4.28528627588294	0	1.39186124575151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23519626-2	4.800207452494	0	1.37860574955861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9783295-2	4.66380105788078	-0.68875272400923	0.851728920157514	-0.808652503993707	0.418715055193428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49081581617818	1.3019284004821
Merged-chr18-5819110-4	13.6601416023517	0.327214037607191	0.496294347126239	0.659314456233289	0.509693861210144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59724327178007	4.01929739676118
Merged-chr11-83272204-4	6.93129181998891	0	1.39850187002009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55641176-4	4.98675887606485	0	1.38640215032417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126210131-4	5.72416618511323	0	1.35386000289343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35406273-9	19.6046633362599	0.221448277630079	0.579905961114951	0.381869289986799	0.702558320205165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82922271681694	3.44903002335155
Merged-chrX-168639895-3	7.76904753400752	0	1.36033723224393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76597145-3	7.08409082060645	-1.8276812701063	1.17217292231199	-1.55922495334681	0.118943146771804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38660038197036	0.303163067301871
Merged-chr18-37655782-5	11.0798314430973	0	1.37376038037448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44272910-1	3.44425293079581	0	1.40180386549055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6586997-2	3.45420584153611	0	1.45351149750366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70503641-2	3.98038819034058	0	1.37825352949223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43623655-3	4.48492250715583	0	1.36514246304765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150878851-3	4.73072212787359	0	1.41369876230227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62933116-4	6.00380154614622	0	1.36875996297102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57495908-2	5.75520531129802	0	1.38016618430907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82048185-4	21.5063110765992	-0.994094181297466	0.495619510248735	-2.00576079177868	0.0448817757185662	0.548544911006033	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20913182021569	4.04994643222293
Merged-chr13-29431118-1	2.693336824137	0	1.43827321157167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156686686-1	1.21654114832206	0	1.7429566601915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135905517-1	1.94578373350512	0	1.49697953791828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105309391-1	4.57213629759906	-1.01638123218871	1.01288260165039	-1.0034541323275	0.315641797013443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20325780798967	1.6794096906117
Merged-chr3-21129035-4	9.7350942422485	0	1.36446321144462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46451448-1	2.31465151332217	0	1.40665243175382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45197024-1	4.21659097844604	-0.0216515852594132	1.00688640610964	-0.0215035034022056	0.982844008799335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	1.83686726518806
Merged-chr5-30652364-2	2.87192249936385	0	1.40459423300531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-92142845-2	8.11555442768583	-1.01378243080004	0.795599995201105	-1.27423634604697	0.202579667767025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66774410987975	1.64474942565565
Merged-chrX-7294243-1	1.22310027835543	0	1.49751855741487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43873015-1	2.49532308804805	0	1.57615213907433	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64361313-1	4.78856126088946	-0.360014588211597	0.842349320303755	-0.427393457243811	0.669092772110337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91004988381885	3.22122530660811
Merged-chr7-101649633-1	2.66010511302183	0	1.40052848342015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122142431-2	3.30780072032514	0	1.46441199682332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118804296-1	3.11024753620561	1.10446733807543	1.06307860578958	1.03893289927992	0.298835944369873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.94654767864912
Merged-chr7-135689775-4	7.04305535924541	0	1.3708365209638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18998170-1	3.48964107653214	0.54238513845156	1.2157900145748	0.446117447872978	0.655512410004767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.80806300091025
Merged-chr14-13130855-1	1.90307914496024	0	1.51117389948253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68158514-1	5.28563393607358	1.53339432586859	0.82300397691759	1.86316757740544	0.0624386929600843	0.684309418106282	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	3.06332423133598
Merged-chr7-128225333-2	3.67397462469517	0	1.3989288831673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108706608-1	2.20886345918091	0	1.49861919209271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-43523482-2	3.93042382215037	0	1.37373094160677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128811061-1	1.74278473625342	0	1.47034096643185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111647479-1	2.00171266591165	0	1.49824409453053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27592425-2	10.2036932977989	2.27155744609834	0.906786287469314	2.50506373716554	0.0122429328901132	0.231644131212552	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	3.67440375747354
Merged-chr11-32189074-1	4.37072698268812	1.48269301841378	1.12524365923566	1.31766396215103	0.187616163512322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18395292683035	3.20758774763235
Merged-chr10-127171125-4	8.34810936661068	0	1.35552143264853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-77058800-3	4.92702976692158	0	1.41817424047369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107639824-3	6.68138223071715	-0.429405932199979	0.698540289932503	-0.614718919421915	0.538740363142814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64161729879494	3.27644747036593
Merged-chr17-64945838-2	4.30473007145939	0	1.40596838898538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73619221-1	4.2062100580814	0	1.37829318300122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13584713-3	4.82745392351268	0	1.38430607692162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11118159-1	3.45955028340678	0	1.40673060912437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24378695-1	3.83417388120777	-1.54370250601614	1.05978343949247	-1.45662070993996	0.145221107714169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22543856127253	1.18909650862134
Merged-chr4-34797735-1	2.08373779401124	0	1.47696250650739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6565922-1	1.94770651087476	0	1.49106115150094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130400906-1	1.30123277245515	0	1.92173812816845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59222459-1	2.89734696128624	-0.839236140670749	1.0917539004547	-0.768704504120593	0.442068750452477	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56343534314907	1.14143228603163
Merged-chr15-93318975-1	1.89403013626952	0	1.56093372415684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118490331-4	7.18783521640639	-1.55989328005534	0.821213653534534	-1.89949749780889	0.0574990953008803	0.648867203956935	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8961882943025	0.730937814817307
Merged-chr18-80455711-7	19.7580792095002	0.366822446361779	0.413233074796693	0.887688979257657	0.374708075693142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99026170905788	4.29172064862322
Merged-chr12-24952385-6	22.1050079187348	0.177585454435817	0.477058806289559	0.372250657769074	0.709706232319053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02490250109708	5.18207659121598
Merged-chr1-105982845-5	15.8488893914216	-0.74070350261111	0.929958891635055	-0.796490586061072	0.42574694507359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34557707159302	0.97908007631626
Merged-chr4-133598906-4	12.0784606060674	0.317691194792897	0.433946916901937	0.732096904987778	0.464109422766936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80636424652155	4.33750650340386
Merged-chr15-86051224-4	4.23292488173436	0	1.4522331632758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95232554-3	5.12325899879554	0	1.37213015148884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45543586-3	7.73323061378165	-4.06322005951495	1.07395291548877	-3.78342476743103	0.000154685095162353	0.00839042011625509	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83031286297958	0
Merged-chr9-41191323-4	10.8771366220954	-0.0477754217621426	0.568833286000348	-0.0839884425506586	0.933065620808511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63444507978233	3.17300509872063
Merged-chr10-19008790-4	12.1583686474175	0.865638922444643	0.619294701054385	1.39778189765041	0.162178571994802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60033597541029	3.82807155295102
Merged-chr18-34196077-3	5.88004368412108	0	1.37134877251873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36437389-2	4.07903895570084	0	1.39685849748229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100211850-3	3.94493924194829	0	1.3868317239021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56466580-3	6.89116936651717	-1.81563675086267	1.25656941634426	-1.44491559896859	0.148481594211239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	0
Merged-chr4-120016894-3	5.13708862859081	0	1.35573110429799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9660061-2	2.939520514677	0	1.43907826369072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-21640314-3	4.80086432620514	0	1.44823921658474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80319095-1	2.80110047459369	0	1.41026485665734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121689768-1	4.41249532328323	-1.00190641932014	0.868582003130923	-1.15349663671206	0.248706597242067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62559269623071	1.18909650862134
Merged-chr5-147363203-1	2.41850754780505	0	1.53288493213285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110932482-4	10.2763588327498	0	1.34800653685456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17170158-1	3.87143624891286	0	1.41250983355099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32230308-6	10.7957853520538	-0.514240242509915	0.646992640425408	-0.794816216412901	0.426720416507829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20222694306893	2.28284312426037
Merged-chr7-34407721-4	5.57635967671345	0	1.35614405265966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146676372-7	16.5844886496239	-0.0167999826091181	0.405804251330816	-0.0413992277163765	0.966977628463988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43382466764566	4.41383767541784
Merged-chr19-14507835-3	9.21333470819942	0	1.35508429206276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125488993-4	13.9255118711829	0.221828431148264	0.48251084294516	0.459737712409244	0.645704496795853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50713626499385	4.01264331309066
Merged-chr19-41656214-7	23.7216607357013	0.454193441547083	0.305642658341659	1.48602765075865	0.13727180734262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85757888154098	5.27980280891163
Merged-chr17-86293517-6	15.3581963831359	0.639529598335513	0.571184699625099	1.11965463843004	0.262860962339674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52267505509848	2.79548786681334
Merged-chr8-11336689-3	7.10385301305521	0	1.35691286986925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120293975-3	4.62952312911796	0	1.40496114088865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45069468-3	3.81099163212078	0	1.44149003809105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62653252-3	4.84409197698602	0	1.36214317802737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5054024-3	3.92347838268411	0	1.38608035113203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64875823-3	4.28601928599662	0	1.38353647231578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61967475-3	4.87073556807054	0	1.39033342760955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103510458-2	4.29468064348348	0	1.3807928431479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56944935-2	6.09711331012396	0	1.39089164560889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166728419-7	17.997008546581	0.339640059435133	0.422069512895292	0.804701711586054	0.420991831656122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87046754444542	4.24675062439046
Merged-chr7-89236834-4	5.71926651481668	0	1.37018787773231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117105499-3	6.91140860086522	0	1.36049043385278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69402226-7	20.0871931360056	0.558289420840519	0.472597184474839	1.18132193584882	0.237474856346236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90238643930288	4.32038017581727
Merged-chr13-46168966-5	11.3601014723458	0.232155800692762	0.782364184563451	0.296736232656537	0.766667892574705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	2.01086664255504
Merged-chr3-154428524-4	5.7778317514022	0	1.35558011174635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29252638-2	3.90821282026357	0	1.39714257306612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8990556-2	3.34116145635516	-0.0374855423708045	1.33122214938288	-0.0281587429928069	0.977535542487147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr2-130689641-2	2.58617897054493	0	1.64487646039449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25073086-1	2.38775573596503	0	1.42711455574926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88689745-2	3.32491806282002	0	1.39468438117522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127759931-2	3.91199609988998	0	1.37103556733633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46505076-2	6.14579885229984	0	1.36021738062949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58111261-2	3.15167437798539	0	1.39693180505003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150116817-2	2.81871967721032	0	1.4300734016342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59015278-1	4.06671231694122	0.617866739162889	1.43450942473754	0.430716402770192	0.666674590633524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr5-67821028-1	2.55078138287985	0	1.41918311380357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-22795454-3	6.12826472461212	-0.0322651719728514	1.03788445040957	-0.0310874413429347	0.97519980518655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	1.4277097602107
Merged-chr9-32657002-3	4.12866485767718	0	1.37280378978059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13731030-1	2.92573373959314	0	1.43748411591546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98289748-1	2.5528009044982	0	1.42388770780279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100166401-3	4.29264446706102	0	1.37345929218545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57859866-4	5.40010307230678	0	1.37531992385111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57730530-4	4.61867358268964	0	1.37462937288466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-66987988-1	2.04618366947421	0	1.48425044943967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132899254-2	4.55163598443272	0	1.48209358360321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120136263-2	4.36161138713242	0	1.39032756598399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65873185-1	7.05420294903161	-0.253360374978622	0.681533210754148	-0.371750592606143	0.710078552736813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47935912293436	3.04218952142344
Merged-chr14-69862674-4	4.59760916784016	0	1.3707344698311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84348287-3	5.11039709702645	0	1.37790137045657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144988536-3	3.31066529962237	0	1.41378711795142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27388555-4	7.70468532614397	0.641041010236789	1.06333587720488	0.602858441983401	0.546602864372957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.28067447403188
Merged-chr7-44887092-7	24.2625381110428	-0.179623443007054	0.427540711423071	-0.420131786769912	0.674389182785533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69102724076653	4.56650883217081
Merged-chr5-102052351-2	6.81757875897649	0	1.35986700298972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117933047-3	4.83268751050569	0	1.36074209649594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65073436-2	2.85606239604711	0	1.63427498828507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29523863-3	4.51864361668537	0	1.36531081813308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36026012-3	6.35045991306528	-1.20055709026375	1.27774964056537	-0.939587108576715	0.347429391371792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr2-153092416-1	6.96634086312134	0.363445586641653	0.810452462502223	0.448447754134198	0.653830084096208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3356278069727	2.52537298537352
Merged-chr16-30775423-7	12.8763296156625	-0.809496025304036	0.741268227200349	-1.0920419837248	0.274814648017171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24517688100283	1.28728541095094
Merged-chr3-83865508-3	5.7847051573427	-1.1713175995357	1.30659116430277	-0.896468330367699	0.37000268725678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.303163067301871
Merged-chr4-59332549-3	6.70103740789496	0	1.40004755305077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45933541-1	3.22550741642796	-2.14690574579341	1.47537990968554	-1.45515452101486	0.145626488208601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0
Merged-chr14-76988846-1	4.70369823284159	2.44575042286718	0.875917668933283	2.79221496450195	0.00523485659606127	0.127606085069639	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	3.26731833109638
Merged-chr11-49755376-4	7.59398605934717	-0.56413291126466	0.873533332526572	-0.645805821322222	0.518405117522258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	1.23107802440432
Merged-chr18-62185775-6	15.2775895083378	-0.266019960540174	0.523068931814103	-0.50857534133707	0.611049916858899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65957170031232	3.48313337090062
Merged-chr18-12734678-2	4.0941598534511	0	1.4879287702364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101699502-2	3.54026146888598	0	1.40039319768728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-103578317-1	3.76733377802087	0	1.42260283806628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119470454-4	6.55317340729339	0	1.36105949864671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25648834-5	10.0170079914541	1.19877442864758	0.656830470131306	1.82508955226747	0.0679875165464662	0.720135115344769	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31465917458896	3.67342847232894
Merged-chr8-33607522-4	21.7588894075319	0.0185088043957929	0.383448026769945	0.0482693953381525	0.961501545093795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58492935629408	4.70729756917831
Merged-chr13-49242421-3	4.31621140245319	0	1.36352866396991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60526960-3	6.6719483750078	0	1.3935876659362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69632345-2	6.88140602337132	1.37479524480452	0.832242501863045	1.65191664896581	0.0985515435931446	0.902186838207275	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66607765809661	3.06325086962784
Merged-chr6-73368235-3	6.87686092535743	2.65069105581062	1.1303511057439	2.34501567021175	0.0190262799327084	0.309732659387901	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.33443165855834
Merged-chr2-58489744-2	4.36834407034112	0	1.37860262442623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85842167-4	6.45849069052294	0	1.36597695659193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136551104-3	3.96259610199053	0	1.39397850014014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64786063-2	5.10546494207387	0	1.37206612963709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85963691-3	4.88405959217529	0	1.39282300545813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173528049-5	21.6090629831254	0.213825072680864	0.430159621704096	0.497083087049841	0.619130460839526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71346230466797	5.08921119635093
Merged-chr6-56653266-4	6.30627482449563	0	1.36065782401562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79367478-1	1.94167320806925	0	1.43344203629248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19158015-2	2.3080632115585	0	1.52948442877621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156652324-1	5.5140415189727	-0.0325355524745633	0.959126581061792	-0.0339220631739193	0.972939299442538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	1.10718024078827
Merged-chr6-5108055-1	2.23328288643632	0	1.51192335084432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37250246-1	2.03347114575511	0	1.54695387921823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68956297-1	1.84879419555196	0	1.83405981489669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-11637245-1	1.86364219052532	0	1.45406597047494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61055130-2	4.03876927188976	-0.034969473968704	1.25504743845917	-0.0278630694722075	0.97777136329148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr8-69149389-2	5.33119720081363	-0.241078909303285	0.939637384852893	-0.256565897855402	0.797513903489458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61477032079243	1.44059547810395
Merged-chr4-122826921-1	1.78014232375437	0	1.47085187145512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43895008-2	4.56976920457867	0	1.40159714145205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89916469-2	2.75906291422428	0	1.59390766486653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24051271-4	17.0133624094655	-1.81552213789433	0.748993131317655	-2.42395031674109	0.015352705720842	0.271577523683452	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80950514011689	1.55528346522961
Merged-chr9-96396682-5	10.2551135726424	-0.957139443559809	0.726158045477203	-1.31808695024623	0.187474542462275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54052543883245	2.06239089973625
Merged-chr6-115654130-1	1.80170628398101	0	1.49682988282943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50525052-2	3.34771808914242	0	1.41054528016012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78270851-5	8.40357447741743	0.236692108819299	1.05217342133047	0.224955415163408	0.822013958834547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.14143228603163
Merged-chr18-4347888-1	2.117287518401	0	1.4493100490411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-117096270-1	4.07913681613462	-2.62986674988992	1.08760229869176	-2.41804081607156	0.0156043263648385	0.274064220491497	C57BL6J_F1_Control-BALBCJ_F1_Control	3.920838138174	1.30172811853968
Merged-chr2-181178200-1	2.03604536682215	0	1.43121849746773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78815612-1	4.50976977821381	-3.03228953485822	1.05256677102561	-2.88085242507094	0.00396601287492707	0.104401207684339	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12177115688982	0.465515277017237
Merged-chr16-42895922-1	2.41507892833173	0	1.50264633216571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6460335-1	3.25950796026434	0	1.41375325543211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24902115-3	15.0566672850046	-0.361257208776425	0.611209613012818	-0.591052890997068	0.554484982922396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57254116657497	3.40590291950374
Merged-chr19-34662288-6	11.549298971447	0	1.34937676622032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31814280-6	15.5799446246909	-0.205695118058334	0.44388157206701	-0.463400895649892	0.643077036786979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53745512203729	4.29121558201922
Merged-chr2-163710981-3	4.72208143129089	0	1.38713331782554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116096576-2	4.55261335156891	0	1.39121007476797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33077262-2	6.0468131912841	0	1.37415366234537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39370903-3	7.18420425012197	-0.0417086558454527	0.905269142500765	-0.046073210592636	0.963251898176669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	0.897114879832661
Merged-chr12-12248060-5	17.693359254698	-1.0531262984381	0.554230126458797	-1.90016068806465	0.0574120354942563	0.64815386031823	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92786116605019	3.66778504892707
Merged-chr15-98153107-4	4.43945720074111	0	1.37878665027767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120219135-2	3.99918374070209	0	1.38405653981227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40631441-3	6.66748355432222	-1.11745229474429	0.792235778185372	-1.41050470770688	0.158390707346058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30923017122179	1.66784418339515
Merged-chr17-26009664-2	4.7396579575784	-1.85298062149136	1.29666574291211	-1.42903491637702	0.152994198032698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr19-8252244-3	4.78562900245508	0	1.36986878981297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64925945-4	5.07015859192068	0	1.3696870712423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9718227-4	7.29095574990315	0.248172194883507	0.720224328850446	0.344576245125759	0.730412966901996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87666011399951	2.17884592431967
Merged-chr8-124221611-1	4.42020206354338	0.413324785867929	0.979844101151018	0.421827090026259	0.67315123085872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04181016172925	2.21206482704682
Merged-chr16-11070262-4	11.2989303928147	0	1.34679270676093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77524463-4	14.1676118457631	0.662646039335404	0.50545162914628	1.31099792962312	0.189858463089303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22676437153302	4.32018111316456
Merged-chr11-47197520-4	6.77797586313443	0	1.37038725244827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78186207-2	9.09165260002486	2.31299154319397	0.711764283862433	3.24965946681445	0.00115543276614028	0.0402024861914226	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77777167463237	4.72942760041162
Merged-chr8-84202051-5	25.5120870147614	0.176893137012068	0.396127612196132	0.446555936940048	0.655195716229497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78309252300059	4.94484924794548
Merged-chr11-61529564-3	4.9668818063335	0	1.39489952128382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70050024-5	10.040636221839	-0.918809144916884	0.690315869330187	-1.33099814988811	0.183189619695453	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04845038512503	1.52554022439958
Merged-chr19-34751324-6	12.3492320656983	-1.22043796797588	0.6955526341345	-1.75463064631265	0.0793225059023579	0.790447680723424	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97326329664337	1.92503739729973
Merged-chr15-67709659-2	5.01330130974504	0	1.4064016437978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94070547-2	5.073187256002	0	1.41039241470795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17294611-3	4.69875636502691	0	1.36634369941093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29388361-2	3.33493848338803	0	1.40403803528127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70635625-6	17.4261960678249	0.568432527672799	0.458345972840158	1.240182223377	0.214908001971961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16733407404903	4.71343497833979
Merged-chr1-59953067-2	7.64369650389199	0.0973560602826156	0.602795517493628	0.161507604912879	0.871693622135571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21242961094002	3.34933645104834
Merged-chr14-66168626-3	7.44969224855747	-2.0062218048764	0.869502063410978	-2.30732264970848	0.02103683976284	0.331400894478479	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13132432600734	2.28733524435458
Merged-chr10-93577703-3	6.11520884920116	0.513387900851352	0.944805416927637	0.54337950614298	0.586868533081846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	1.81699583567788
Merged-chr11-100555766-3	6.16810011542864	0	1.35742582419802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55863943-2	4.36689270613316	0	1.39381545837983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-95747527-3	4.10637048998855	0	1.42256182563299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37584739-1	2.13755966607841	0	1.4755195639207	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138972642-3	6.23237587701109	0	1.37365354346241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99050711-2	2.73254747035506	0	1.52910811943441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3023638-2	6.04061707751157	0	1.39959643467566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55847962-4	7.1986820756104	0	1.35870091011167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60178379-3	4.69385258602403	0	1.37182091774344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44171650-2	5.05196539600501	0	1.42441575240815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99484441-3	5.44917034508978	-0.342822549922257	0.923016000808103	-0.371415608854142	0.710328001533919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77802408088656	1.39949824061849
Merged-chr8-85800419-7	21.4965520160285	0.0478860240451957	0.404387507876077	0.118416180303646	0.905737905950665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37944804489494	4.42463098092815
Merged-chr19-36347990-6	14.0802243827071	0	1.34714238699408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79036159-1	2.26351365860467	0	1.49431147544161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32683899-1	2.61607420135714	0	1.48789045464023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108845544-2	4.59748503346629	0	1.39342955828685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21909081-1	3.36781275615304	0	1.40682890265364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150837718-1	2.45173678178158	0	1.47135949965781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42268888-2	2.77371250194208	0	1.39572803260266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146433234-1	4.5218157113098	-0.0685882249697401	1.01404787799737	-0.0676380538413963	0.946073762163067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75122680664397	1.97101938197404
Merged-chr9-3018803-2	6.76885473918428	0	1.38518202598264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-49608988-2	2.64053430987901	0	1.45258783580941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78778593-3	7.78310798768669	1.62411665616257	0.702758312598234	2.31106004304367	0.0208295386246584	0.329622943452264	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46168672155135	3.19082812030792
Merged-chr13-5938161-1	2.30437026358519	0	1.57719630055204	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38444255-2	3.46116752269601	0	1.40009184847241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-1428-1	2.63914061488214	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45231035-3	4.60437136314493	0	1.36790685497909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157386667-3	7.82766759050816	-1.39949511357291	0.706103404335987	-1.98199740290019	0.0474795313217568	0.569869693777739	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10067909930749	1.87167189675086
Merged-chr11-117306889-3	5.88005845062685	0	1.38372547488584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79482142-3	8.73646896168149	1.77918192290394	0.624287617960472	2.8499394697535	0.00437275500212044	0.111752980329227	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18210741161866	4.27769446777234
Merged-chr15-9111137-2	3.7425297364194	0	1.39275026226764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28688022-4	6.09103890393099	0	1.38744806386092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32408002-2	4.31019022871105	0	1.38767278165179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-5213913-2	4.85427293604379	0	1.40698197819387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3946290-4	5.61252990461907	0	1.36233566346558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58202840-5	14.4362480541231	-0.103582870932162	0.534503008736432	-0.193792867840038	0.846338071787693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33605717110028	3.38180007947948
Merged-chr10-93471517-5	17.8378096483288	-0.13840316712236	0.490663906777585	-0.282073258722691	0.777887337445844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8366143915177	3.74738442214274
Merged-chr2-165075121-6	17.4755908864908	0.10501539106157	0.361475897312762	0.290518377137346	0.771419693810574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56177427326683	4.57410026833608
Merged-chr18-62972929-3	5.30866681271741	0	1.37677806352948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128339502-10	39.3673078716268	-0.640559240878233	0.310887146032306	-2.06042369089029	0.0393580540021733	0.501745985259006	C57BL6J_F1_Control-BALBCJ_F1_Control	5.76235210656559	5.1666748122475
Merged-chr4-139201929-4	19.3492934777589	0.849306459652761	0.341166560225152	2.48941883135399	0.0127952131680055	0.239531071777744	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34159614444462	5.36424234993145
Merged-chr11-74501003-2	3.11662809237169	0	1.41075648193905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89453259-1	3.02725701276168	0	1.38934280974046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45912907-3	3.56550442621445	0	1.40848394525477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150608841-3	6.83368913708777	-0.0335790976996524	1.14478718677283	-0.0293321746501307	0.97659966627608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr9-77746572-3	3.46089473577862	0	1.4432563031413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24445436-1	2.74325969588348	0	1.42004478739242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149281630-6	12.0315876804582	0.646580766803467	0.740024704823636	0.873728623637722	0.382266059030059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07442133902704	2.349303869554
Merged-chr11-67636617-7	17.2605123821994	0.0928254943700225	0.582420745716047	0.159378756771275	0.873370474613453	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30325144510655	2.60457809047999
Merged-chr9-92485114-4	10.7208271387471	-0.557308811584662	0.483159807302854	-1.15346683056219	0.248718824446441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94111885486738	4.26815747548781
Merged-chr9-65598936-2	5.11039954012574	0	1.3775413767038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88433699-4	6.33416517915438	0	1.3753559111594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54730092-4	4.67169811020088	0	1.37626776978907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125270423-3	6.35974211806485	0	1.37275308078394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126745514-3	8.76794104963066	0.39284560777074	1.23138938529491	0.31902630675727	0.749706564365077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.577068348605183
Merged-chr10-111411742-4	5.79504403973494	0	1.37290439562812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99603898-1	4.33371120043162	-3.7659334245893	1.19512693672155	-3.15107400634776	0.00162671266573509	0.0527604258930154	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30039026721351	0
Merged-chr11-54464788-1	3.00305596599736	0	1.43052419048781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115488285-6	17.1099408383174	-0.0157397725662115	0.516023831015357	-0.0305020264960264	0.975666677224382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45009380789689	4.62207591944605
Merged-chr18-65704171-5	15.2886873985315	-0.821244064377413	0.498231072317963	-1.64831964525349	0.0992870954934507	0.906931141644847	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2220786048172	2.8611732855216
Merged-chr10-8513440-3	4.84042145889686	0	1.3530827548927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92711801-5	14.1330006012347	1.88300148019464	0.553509003475744	3.401934690078	0.000669106257162737	0.0267834661510377	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13923004754663	4.28940325694265
Merged-chr4-154933739-4	16.1748919131578	0.385090696709444	0.550601912512744	0.699399489827472	0.484302406583305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90518378392668	3.72825023649774
Merged-chr9-63960516-4	6.8722064743173	0	1.3543982583755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53856851-2	3.5768912935693	0	1.37952594092909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46961475-2	4.08468571533506	0	1.38840486025497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160441364-6	13.9603166611417	0.0814098540975373	0.463652169287151	0.175583895623096	0.860620855214669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35629291665924	4.2007020894068
Merged-chr1-189867193-3	7.35986371354281	-0.79060377364003	0.753315152624603	-1.04949936409152	0.293948347759115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52024010234604	1.20027794713453
Merged-chr15-101975701-2	5.13850417952239	0	1.35344542442489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90105666-6	12.910505734791	-0.82109646497861	0.572830141501083	-1.43340303781319	0.151742690763799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43799893445454	2.43841520150777
Merged-chr17-29377743-2	9.52854357230805	0.251468741117616	0.700638847373134	0.358913500244004	0.719659799889905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80363277275322	3.2109938975077
Merged-chr19-32907022-3	7.31254296326108	-0.256388725674137	0.844128554023203	-0.303731848013152	0.761332192347436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8405601103675	1.40024388691264
Merged-chr1-57429939-3	3.9733176878631	0	1.37113882332792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50286551-4	9.02640990896039	0	1.36930999361717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144287346-4	6.15386731946018	0	1.36194042040715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79535506-4	5.588709744843	0	1.3796874359823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36549287-1	2.50403343496928	-0.222033511489787	1.27566762322049	-0.174052792003337	0.861823973336404	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.577068348605183
Merged-chr5-64240398-2	3.3526157590688	0.548918769923883	1.22553579103193	0.447901051883341	0.654224609215779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.90363402565156
Merged-chr13-3780664-2	3.1625426267989	0	1.48465641682468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120720594-1	2.01546679740539	0	1.50140519828008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110481197-2	2.93865482286906	0	1.46697421085363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96661664-2	5.12778883307452	-1.54624989439155	0.998735747574205	-1.54820721912396	0.121572413870713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01259914296816	0.841757702988201
Merged-chrX-101815596-1	2.58817506981123	0	1.48677517511513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109104234-1	2.21712425175271	0	1.50176654052311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113364575-1	1.49691999149379	0	1.92820026563552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40202411-1	3.07357529490065	0	1.42055950848844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3645801-1	1.71774339308826	0	1.45952325511238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56338002-1	2.57477826879373	0	1.40154077522165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92145160-3	3.3222572981852	0	1.44732419622338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43112866-1	3.29422768802527	-1.62193507112451	1.28772988057162	-1.2595305083738	0.207838777842622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.465515277017237
Merged-chr18-9743412-1	1.42168295251279	0	1.67020859012868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155682109-4	7.09734236153837	-3.12201052925488	1.13181290424126	-2.75841573952348	0.00580822768802475	0.137273673431886	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	0
Merged-chr9-115777308-2	3.27192647891636	0	1.40398098508736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121597776-1	2.88019188947881	1.71438883600631	1.30882677615074	1.30986687256531	0.190240875666388	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr6-135324881-1	9.71812856448581	2.74930221164479	0.629873219795793	4.36485014005854	1.27209937669323e-05	0.00107710358282971	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19751042397086	4.49975946826384
Merged-chr2-90560232-2	2.64965836040369	0	1.5619330683078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35693299-1	1.68288901822087	0	1.57090726802607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130691543-2	6.11850288904105	0	1.36484366345462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28743734-1	3.83974307587388	2.4482642437342	1.31022566708378	1.86858211164752	0.0616809764229896	0.678316042358344	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18984215491549
Merged-chr12-35831431-2	3.71048125241149	0	1.40038578641046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52861439-1	1.97666038011546	0	1.45005765567176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149793882-4	17.0566837941389	1.13868251387591	0.462118369911209	2.46404944710311	0.0137377157941659	0.251606635058985	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01231564474398	5.47079596918774
Merged-chr5-136933418-1	2.74524326212415	-1.70434225495306	1.41024519068411	-1.20854321377	0.226838384118992	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr2-167723983-1	2.62042764538013	0	1.43639517095768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63980292-3	6.37737916724163	0	1.36499848591887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141514429-6	14.3246016433382	2.20612028076686	0.525726492556123	4.19632701034435	2.71278486510407e-05	0.00199816087374244	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49975101303765	4.84125271976576
Merged-chr1-156085965-3	12.3391968173186	0.559871449382894	0.523024693717103	1.07044936139425	0.284417090844826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97357786813651	4.39589445889807
Merged-chr2-166684225-6	12.5452325446354	0	1.34376558893647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8493491-3	7.90425028770718	1.19954104437054	1.12236168378715	1.06876514201996	0.285175510057673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.28067447403188
Merged-chr15-50997297-6	10.785983815707	-0.555024031222041	0.825056335602749	-0.672710465057596	0.501131508500713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	1.62825810554086
Merged-chr1-72142092-4	5.4277969064263	0	1.36311499999304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48138778-2	4.49201758519392	0	1.35733850879282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34103002-8	19.2090859047749	-0.149147529540329	0.370740431458737	-0.40229636933173	0.687465926316444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72593296681456	4.48389787547327
Merged-chr4-3419899-4	6.1310040602328	-1.88551784144123	1.29916267885834	-1.45133313335183	0.146687119334266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr12-79072728-4	6.49333010407727	0	1.36333080660626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49907534-3	4.22575206831661	0	1.40239293108493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38093229-3	3.37162897648221	0	1.44826381876628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52802348-3	3.94435585654558	0	1.38688789089618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54206406-5	11.2271690840854	-0.820117459760575	0.655698949230359	-1.25075304867151	0.211024589488198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34100553314502	2.41894820090875
Merged-chr4-132947822-6	12.7988436077946	0.252048624878598	0.591774287537493	0.425920203338725	0.670165992720041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2918910912681	3.45579897469603
Merged-chr2-163777064-1	5.11884853999365	-0.464514293713926	0.966090622685897	-0.480818551392723	0.63064546413348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26028312783496	1.48299123756315
Merged-chr14-33393475-3	4.37746860800457	0	1.41363688135848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-61351038-2	4.21203721174328	0	1.40159152263928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105878102-4	11.6687163098314	1.08766525403311	0.644826734981502	1.68675582916752	0.0916503120535498	0.860898447022449	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25805531955446	3.65789593394899
Merged-chr7-28214316-2	3.94599433002489	0	1.3809727387749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88379955-4	6.23451667985899	0	1.36924229052338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92884575-3	4.66117511673429	0	1.37087538706109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62127985-4	6.0237573915002	0	1.37193901227431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71405812-3	4.26277875144844	0	1.3644811133881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66822677-8	15.6418525394349	-0.42843775303744	0.438206883617418	-0.977706578912377	0.32821946699595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40267304356562	3.74139200703793
Merged-chr8-88755299-6	12.0216437550846	-0.759328162555931	0.600002636549383	-1.26554137648933	0.205677325834346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89502783791772	2.80260830800174
Merged-chr11-16591786-1	5.59524073031038	1.16966047955419	0.855776340039553	1.36678291374604	0.171693359902937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	2.58456732057756
Merged-chr14-101560813-3	4.05363849791098	0	1.42765161816087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21265631-4	5.14954726567028	0	1.35684280458608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100422607-1	3.55074289476274	0	1.39495545220778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95449930-2	3.45492855084079	0	1.41174114364915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73031325-2	6.27249390333962	1.77071975650209	0.672764850600303	2.63200396828415	0.00848828714311565	0.180381079285623	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94792243194202	4.06388470851717
Merged-chrX-57299154-2	4.39712460869795	0	1.38576813097944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83797996-4	6.71865491276595	0	1.35531062644788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89342193-3	6.17915813582161	0	1.3667654603784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23085804-3	7.71531024819453	4.54986807316873	1.06388468228349	4.27665530760632	1.89722213727302e-05	0.00150556347678867	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.19683869162119
Merged-chr7-25805725-2	4.24564036981506	0	1.38633325361742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-24597158-3	9.90105500285155	0.678901611365273	0.634828281068754	1.06942559367759	0.284877939868281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68475914241845	3.80087375634362
Merged-chr4-136971181-3	9.69279100984373	1.17572792562723	0.610013651264429	1.92737969583171	0.0539323281142002	0.620979696491423	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19472571485655	3.81434672595514
Merged-chr7-3962183-2	4.15582743091919	0	1.38849053389336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87033593-4	7.86126566227317	0.969626670777092	0.808773416634695	1.19888543667979	0.230572495264642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81518459389541	2.15527866444563
Merged-chr4-45455294-2	7.90556830733479	0	1.3599621841668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96896195-4	6.73196638132066	-0.695686673178016	1.36880229352157	-0.508244818459644	0.611281663362377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr12-11214952-3	8.72894442739856	-2.45804074852837	0.830936786983123	-2.9581561281608	0.00309485328356787	0.0870548928153314	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98649690444438	1.58309189503961
Merged-chr6-124724588-3	4.92013115844514	0	1.3681933072714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94262775-2	2.77126429517487	0	1.54383280443939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135470649-2	3.64519534342015	0	1.42010173576937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3002377-2	4.07686666798849	0	1.41035607839139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77896437-2	3.18393488841539	0	1.40685543711152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93191452-2	3.31962884042429	0	1.38179010662425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80841813-2	2.92726818430003	0	1.43807570391617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4501510-1	4.6962290343661	0	1.39015199556824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22061376-1	2.74223286004742	0	1.4882955015339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79372649-2	2.98235207822752	0	1.45057343877216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82997032-8	20.6188793306329	-0.547836178513982	0.369833945026211	-1.48130312504212	0.138525816132189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87532901269101	4.16539177284932
Merged-chr5-124432570-2	4.66614287321103	0	1.37033195490041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85592793-1	2.14646682172202	0	1.41806239811874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65663704-2	7.4322927059387	-1.77779548236314	0.930850930562038	-1.90986056305463	0.0561511689601228	0.638800295152204	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13532629014286	1.39234354082305
Merged-chr2-62686127-2	2.86503764663439	0	1.43536178149291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94129080-2	4.03313780327927	0	1.38185795506433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84723003-2	4.60698369583943	-0.714139076572979	1.13629239646053	-0.628481787608077	0.529688373719741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	0.723581231604105
Merged-chr13-105380143-2	5.71650878305333	0	1.38875957326369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101810710-2	6.49030099016852	0.591166315582996	0.757408073168498	0.780512297829022	0.435089391768229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09282686802642	2.59127241500312
Merged-chr1-155140275-4	4.87606163163209	0	1.36178903844405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75965192-3	4.87624272047353	0	1.38527191832393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-35732570-4	8.47392663409461	0	1.35723799003209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34045042-1	4.96029170739182	-0.546898680453528	0.918800135308657	-0.595231388673888	0.551688811447165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02682520395175	1.75397137748192
Merged-chr18-57675283-4	5.44415617486575	0	1.37560744579447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33260374-2	7.26892210768881	1.44018714488302	0.847542264628773	1.6992511229087	0.0892718776063112	0.847046604084739	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.98199979539519
Merged-chr6-17647540-5	9.65878267160087	-0.649979821944897	0.674927407457376	-0.963036638849113	0.335529136787957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17521452392493	2.24992080272587
Merged-chr5-136623335-2	3.48927946863796	0	1.40043532743726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64459473-2	4.53150387664087	0	1.44205239642496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79578743-3	8.83648198405856	1.67122071861174	0.712129740935727	2.34679247690987	0.0189357980788369	0.309201275989034	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75238521850622	3.9411032479025
Merged-chrX-48405248-1	2.4257041797381	0	1.44291475981474	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40151084-1	2.25109286679776	1.19881289268763	1.42008813528437	0.84418203553793	0.398567691522629	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr2-102981026-3	5.38200156561152	2.65625769918092	1.18643493007931	2.23885662149491	0.0251652467330365	0.376252500302508	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.25298535761957
Merged-chr10-94359336-1	6.95977965857845	0	1.37028563226657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61083228-4	13.2064812072821	-0.982284028207035	0.944456637123549	-1.04005201466813	0.298315735612368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	1.02748994520012
Merged-chr4-128971265-3	5.1533658587275	0	1.36548518437684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133179420-3	10.0381563068576	2.292528356096	0.853203840238895	2.6869644133975	0.00721046343344102	0.159838688717401	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4576512849049	4.87616510004544
Merged-chr6-91153710-2	4.02849964288263	0	1.41486320779416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37956802-4	5.55983806828709	0	1.41464414786885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148322785-3	4.43180965768763	0	1.3852900241539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134628760-2	2.37035884375998	0	1.43893910371128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60779880-2	3.7953733622816	0	1.38538612424411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38001678-3	8.58204629317402	-2.91957806181972	0.646296159686779	-4.51739967514996	6.2603672826169e-06	0.000599132579429176	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62317381246214	1.52044370529506
Merged-chr6-125359601-1	6.36364595780103	1.77563244009529	0.694863396751181	2.55536908174645	0.0106075255817619	0.209221510558417	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	3.67767710272121
Merged-chr1-36128648-3	6.38164381657179	0	1.37846891275894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83618531-4	9.29614303823428	0	1.38581703416039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60371741-3	7.9790848078746	0	1.36381773406051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67184195-3	6.99940651232669	0	1.37470702372631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23519072-5	9.37695964245123	-0.0901693026300038	0.662688604681611	-0.136065871652231	0.891769207039197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22687404814607	2.79234254451658
Merged-chr13-98812432-3	5.27131170111253	0	1.37987378732476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54021534-5	15.9763149717827	0.180198334218409	0.604974537837535	0.297861022155615	0.765809238144797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39381651296295	3.23109581333341
Merged-chr9-65084638-1	1.23852394265107	0	1.69329431331144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106568663-2	4.62181155833403	0.758503066731396	1.19044547053642	0.637159017783157	0.524021269266228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.662147012823607
Merged-chrX-144232588-3	6.858372508279	0	1.3958264799171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57883924-1	2.1956178759791	0	1.44234753780116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107707916-1	2.95555845733842	0	1.40483386512698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115697800-1	2.08314954209482	0	1.48895112421344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35741219-1	1.76857128641227	-1.87514606949081	1.43979097287444	-1.30237382010197	0.192788627591412	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	0
Merged-chr2-77285075-2	4.26458593030938	0	1.38764706998458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110910641-1	1.77524147307018	0	1.48024430567757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63136393-1	3.00960599793347	0	1.41462309316452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139601764-3	12.8873223661188	2.14392182930907	1.03780984188599	2.06581373849082	0.0388460703633782	0.49826180719275	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.60650301571838
Merged-chr18-60536194-1	3.45150275780292	-1.43023933057404	1.05320321000314	-1.35798990830058	0.174466886384425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7953101035406	1.17858215524007
Merged-chr12-27303353-1	1.166701660982	1.14327539497571	1.59494379749604	0.716812339576215	0.473489896766713	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr10-44425048-1	2.38322930373757	0	1.41865384934628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37546791-1	2.6536531752209	0	1.40930585257958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171964169-1	1.89176415495155	-1.59703351607943	1.61018544509659	-0.991832040801751	0.321279464904984	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr14-70371099-3	8.91142824832074	0	1.38100244294135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138137928-1	3.7676315313796	0	1.395112731539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37779921-2	4.46718959013908	0	1.35923705379877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60804253-1	3.56741651318557	0.235804567823963	0.961995821104099	0.245120158165891	0.806363395002195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	2.56514217101278
Merged-chr14-79541819-1	2.91028549940032	0	1.46702646982329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88435838-2	4.01270049901842	0	1.37672448927797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57801115-2	9.71799001224549	0.0349428669952798	0.483985766121412	0.072198129451836	0.942444233772007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3733725282078	4.33897016832633
Merged-chr1-128723027-2	7.54915484986293	-2.08747059464527	0.776109516298283	-2.68965983641282	0.00715248854690698	0.158937438719972	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79328671060054	1.92406129100359
Merged-chr4-71252464-2	2.79162063334109	0	1.50154163185308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8240431-2	2.9261114317002	0	1.41500013688502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64051225-1	2.82478727699663	0	1.39987558394916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-31742604-1	2.05915505407671	0	1.45500634182053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96539099-2	3.29888533289436	0	1.58276886515284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27539881-2	3.78129801334067	0	1.38542062683697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81004910-1	2.30825517455001	0	1.48415289109896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61387854-1	1.63335138115185	0	1.54016068668817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32957107-2	3.42642598811979	0	1.37520110711825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83011453-2	3.62519322453592	0	1.43979312997911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103601136-1	1.45372908621748	0	1.86876660251686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19737147-2	7.13995641167535	-1.39802388355484	0.790346329126915	-1.76887502609042	0.0769147327134706	0.77569720882589	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99699765796785	1.90976402671119
Merged-chr18-88770671-4	4.72687764579248	0	1.37339988446051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12196981-4	5.70409945956168	0	1.35661559062717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87293322-3	4.95006380426425	0	1.3636669480878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120129699-3	11.8084782967572	0.938366970267028	0.543081283822073	1.72785731753271	0.0840138082349061	0.817667284292425	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14754462744395	4.10242828753901
Merged-chr17-51382757-4	5.26429995834337	0	1.38094242732157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128312243-2	5.54335638070409	0	1.39045914563829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81434158-2	5.25906146618529	0	1.38538432858104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60491864-3	13.552091351321	1.78167281355956	0.554540526443467	3.21288116665932	0.00131410648412338	0.0447018237612409	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41373779137467	4.44984633740237
Merged-chr14-77832524-5	17.9382296917748	1.28644149990245	0.470535085944825	2.73399697138269	0.00625706199437045	0.143999844602872	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38753597675271	4.43677210605511
Merged-chr11-107102992-4	4.2721334087894	0	1.3891966242433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152168523-2	5.58253993932009	0	1.40853337729923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94107896-2	8.35214221815829	1.08178685171149	0.690741658566568	1.56612365606618	0.117319670985923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18472114098112	4.31362651335972
Merged-chr9-50780847-1	4.13343949911993	-2.00988731180951	1.27808838123473	-1.57257302493259	0.115817717850276	0.994115794192827	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47444931357134	1.01477727114168
Merged-chr14-30617481-3	4.61571689575651	0	1.36920128067928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63043638-2	4.29340786422524	0	1.36573928419043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5922891-4	4.75960106081251	0	1.37928379638119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39308735-2	4.79134797060155	-0.0427924962903086	0.942408920670534	-0.0454075670886703	0.96378244954598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25531563498385	2.226003331274
Merged-chr10-37262567-4	4.77158744171565	0	1.37425765682122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25438534-2	3.87821429110532	0	1.40735065579865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120034538-7	22.5262836698668	0.208915700732574	0.459869414202226	0.454293532643386	0.649617570332165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82924031786987	5.31630021970751
Merged-chr4-150260976-2	9.22016477987717	1.55777700920159	0.651253995546227	2.39196537734105	0.0167584231697989	0.286568808432423	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65946941398048	3.86630464853942
Merged-chrX-169338434-4	4.83237766894504	0	1.39722536429513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-169370920-1	2.02112388572653	0	1.51210242873762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106475475-3	4.03128078004103	0	1.37764670312775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17726300-3	5.50871939061683	-2.27790029898036	1.20423714019934	-1.89157120548807	0.0585481354175878	0.655908101470409	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	0.303163067301871
Merged-chr6-146410399-4	10.4489099120327	0.399047971375217	0.680275965163196	0.586597192625329	0.557474268590837	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37544986530815	2.45594736858985
Merged-chr5-143509919-1	3.19025536921573	0	1.40014392061171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79757907-3	5.34583172668204	-0.536496441135429	0.888459202493183	-0.60385039586502	0.545943110424749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	1.7349297513737
Merged-chr1-122357216-2	4.87257201969989	0	1.37909086744127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29194718-2	3.80457594144483	0	1.38840788142812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43164379-2	5.01178394729945	-2.72597402831353	1.19658049308726	-2.27813677730976	0.0227184296597221	0.351737715144641	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83225203110276	0.465515277017237
Merged-chrY-90812874-2	3.91743276924528	0	1.43594535925015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48275792-2	5.51451200715895	0	1.38686467879458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125792731-5	8.39108760556647	0	1.35094646264427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177702442-7	9.7524620632344	0	1.36372881203215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8686298-3	4.98631531739594	0	1.37173168324083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16629836-2	10.5661555282246	-0.595393516904518	0.710750566460559	-0.837696858786194	0.402200978093888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08320653278703	2.22937638953367
Merged-chr9-44094919-2	4.45456119375301	0	1.42562139620484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102501245-6	16.0207815897866	-0.736557364151474	0.496129683359396	-1.4846065229641	0.137648086527737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36334452937568	3.08998428917574
Merged-chr12-40583925-3	6.2179279428157	0	1.36797436614204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-18617855-3	4.43775768694739	0	1.36204034305193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140783129-4	6.18597619613048	0	1.35769767686449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141637689-5	16.0747396896954	-1.4801204551572	0.459309893081822	-3.22248764385645	0.00127082646809516	0.0434470792321917	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13697289969235	3.66846924877523
Merged-chr1-177261519-1	3.29933315148074	0	1.40924718116022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86713178-1	3.90121125464544	0	1.42237809041515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55616763-1	2.2072959327419	0	1.41381155382347	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54402819-1	3.62089326950841	-0.620225996995818	0.944586393221469	-0.656611191360237	0.511430951021308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	1.40024388691264
Merged-chr2-34782610-2	4.6023118538446	0	1.60199376688045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108742024-2	4.96768736873955	1.82839681361489	1.35994202354599	1.34446673605057	0.178797505988909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr3-152913186-7	12.8960584127946	0	1.351714161719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126850458-1	2.87650783514607	0	1.50853099696605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14216749-1	3.49713691868086	0.415659296156187	0.98815098690859	0.420643506572379	0.674015419389583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.85699717634292
Merged-chr2-129392400-1	5.87694486747567	0.671198462267554	0.814578417282045	0.82398262466504	0.409949430721452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28545538398646	2.53692024245732
Merged-chr11-59248307-3	10.0120404228802	-0.255715101652962	0.676472540224178	-0.378012537756846	0.70542128006625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8277168677724	3.14161407264516
Merged-chr17-29837690-4	7.62294514187513	-0.644328246119981	0.95110639056738	-0.677451284640837	0.498119668847644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	0.730937814817307
Merged-chr13-59510158-3	4.43793723742471	0	1.39187793368277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84467907-4	6.31736372793382	0	1.37412030074581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69374182-2	4.83890986937888	0.324890621075573	1.14239350562517	0.284394667402961	0.776107945160827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.662147012823607
Merged-chr3-10043723-1	4.5949709310731	-0.2153392088934	0.871281412112718	-0.247152304524937	0.804790355843985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84022605426951	1.4068548238317
Merged-chr10-95795716-2	3.85150873709066	0	1.39812681992567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105508551-1	3.20534023976076	0.621805722884773	1.39433188512622	0.445952451864416	0.655631592553572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr7-126652827-2	5.38485578347395	0	1.39300330776114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13513529-3	6.80278485650537	0	1.37878902184209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28007848-2	3.62305047294859	0	1.39644204820185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112632495-1	3.09188363287618	0	1.44041950473945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99696324-1	3.09269385487168	0	1.43785941056987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66279500-3	5.61553450934708	0	1.36903340259837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121329797-3	4.00191778482363	0	1.38770368701324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75259282-3	7.35616751978972	0	1.41654544885323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_GL456370-8050-1	0.983839746836112	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52507675-1	2.06955080268307	0	1.48436697337379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67099027-1	3.07371204751651	0	1.42883887354774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-27438415-3	5.57388662875238	0	1.37047420031513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29376580-1	2.4784774263307	0	1.46456246362028	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8416297-3	4.47492492114507	0	1.37491729934988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46448923-5	8.05165105537687	0	1.35594797558276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20098117-5	11.5634207387403	-0.592350966375762	0.609489666402318	-0.97188024511109	0.331110128675843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00096203503196	2.66260247574315
Merged-chr3-144676498-3	10.1888492948104	1.40603861517457	0.623705194475417	2.25433205884577	0.02417528595274	0.365954990004175	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30779555871676	3.97311447704698
Merged-chr14-77546745-4	9.51007668949831	1.01128159585754	0.721412137759282	1.4018084017807	0.160972468871826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	2.75436498850768
Merged-chr2-5041001-4	5.22354471668663	0	1.38366020735487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82118901-2	3.63319558010581	0	1.40338909664259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-84362501-3	8.06993639846793	-0.309331258699638	0.617987282898891	-0.500546317472115	0.616690451126846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21017871366514	2.231546538391
Merged-chrX-143063143-3	5.51791770579923	0	1.36336677687221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128240912-5	14.6604933076176	-0.438675327017344	0.57525848983161	-0.762570800381849	0.445719404189981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14287090561885	3.1075986506056
Merged-chr10-122882126-2	6.82309114312704	-2.90089832899082	1.1105527611601	-2.6121211260242	0.00899823672407893	0.186978268380813	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24476717970129	0.413263464506793
Merged-chr7-16990218-3	3.77883581859726	0	1.38088030888618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55811981-3	5.72028991597232	0	1.36612239955757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3729838-4	8.32807260511632	-1.84723236636195	0.93554938579274	-1.97448942238008	0.048326119016931	0.576706395851835	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62235589016187	0.577068348605183
Merged-chr2-127251852-4	6.19313977716014	0	1.36141791669268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111100256-2	4.04648892882097	0	1.38623678542629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16943692-3	4.90929899182527	0	1.40938430451091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31446591-2	4.49838843974504	0	1.37887525859286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130671459-3	5.58991162786828	0	1.40320227606053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-49432513-6	12.9670577363571	-0.683159378942809	0.759047969115697	-0.900021351402469	0.368108888216169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05271282077275	1.89584045839373
Merged-chr5-38580942-4	10.0418834474369	-0.364145811132664	0.786230448662917	-0.463154043133206	0.643253954848901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34353547422608	1.3626301568499
Merged-chr6-97354523-1	2.33690656961183	0	1.43014523690954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32280308-2	4.32641535128505	0	1.37345802749643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97296485-1	6.40020609356758	1.00388630454566	0.750791559336202	1.3371038766515	0.1811887319598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21648485999896	3.00835036693839
Merged-chr2-153117868-2	2.29938720870734	0	1.4935844210022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12052009-1	1.94606796746158	0	1.47259310108373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10675249-1	4.13254970254893	0	1.39872711521184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95924961-5	10.2537092450411	-0.236214287865385	0.550157437789713	-0.429357619546848	0.667662990717138	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17716248334346	2.96330262139117
Merged-chr11-53309052-1	1.4414622294501	0	1.59171623845182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151103855-2	4.09579433006998	0	1.38040869048788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127509092-3	6.38660577722549	0	1.36355928913157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173732860-1	3.09522688833434	-1.47855058844828	1.2810377863464	-1.15418187051703	0.248425613659275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	0.577068348605183
Merged-chr17-74846657-1	4.39274740818635	1.77716137117068	1.16734848252589	1.52239146901985	0.127911021126536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.45526469271556
Merged-chr11-116368319-2	4.52567266902446	0.486213058706158	1.24172527057432	0.391562505997222	0.695381495917274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.723581231604105
Merged-chr19-59020990-2	3.96701764276742	0	1.43526216640581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34870352-2	3.46646757793844	0	1.41387609625032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25291825-3	4.29950484479901	1.20341953632834	1.38127176794083	0.871240232559285	0.383622996629378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr12-51832600-2	4.28514624162989	2.72204073293369	1.17729741659663	2.31210966282646	0.0207716407980709	0.328999307151031	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.03427056425014
Merged-chr16-10384405-1	5.7648229046818	0	1.35305241556374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54156976-1	3.06081380488509	0	1.40317748668831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95086905-1	2.41405987936536	0	1.41941069756492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30503980-1	3.01799559735069	0	1.40492611922569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120708325-2	1.99163636001463	0	1.52861113108106	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45330641-1	1.66790762835382	0	1.49927277912748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37029982-1	1.78792160125328	0	1.57923561733429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21564286-3	5.06279359922834	0	1.36348221641294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35535263-4	5.37330371176382	0	1.36921225737902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86586199-6	14.0737231540816	-0.378702488906008	0.604645234442742	-0.626321795548478	0.531103893176558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26702399068743	2.42345445095442
Merged-chr16-25038711-2	4.3502542710053	0	1.37282734794194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45724417-4	4.69679238158599	0	1.39948329942973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-49120188-3	6.86589148404271	0.504017352596278	0.869568436190367	0.579617809961467	0.562172379990344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	1.52198329379458
Merged-chr12-113146903-6	21.651985092921	-0.574134089403735	0.441961782109119	-1.29905822775867	0.193923947160811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9462643722546	4.41725458411666
Merged-chr2-166682619-4	5.17423074464109	0	1.3929390681211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75298744-2	4.64067458749234	0	1.38682927964108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74932705-2	6.78645297372854	-1.08426508655791	1.04124704091328	-1.04131396676709	0.297729856664161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56763655772049	1.02748994520012
Merged-chr15-6065266-2	3.75156109270601	0	1.41514940724053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98768526-2	4.96010122791176	0	1.38906100620939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108730110-3	5.38848652968146	0	1.38644498973465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40060477-3	3.927554148031	0	1.42487731601151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172047099-7	19.0117625990206	-0.0413271787932489	0.397801331246667	-0.103888990677165	0.917257443996562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76520216963453	4.67836685843344
Merged-chr2-156189365-4	12.9390554589846	-1.24183848839454	0.454302639450929	-2.73350489421639	0.00626641920445017	0.144154160615619	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82124097566032	3.54695836327323
Merged-chr2-76255153-3	11.4464627182835	0.744097518319122	0.609772512173158	1.22028707995912	0.222356065868626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32453430357481	3.66701984598363
Merged-chr1-159193325-1	6.68742193185162	-0.203850407996707	0.981638346358852	-0.207663452383294	0.835491756312953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64500873683875	2.35729737493328
Merged-chr1-59286638-3	6.78550963770529	-1.29621459491601	0.911749569391598	-1.42167831873061	0.155119657033924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08829123635224	0.97908007631626
Merged-chr10-82935187-3	5.29778576646611	0	1.37900968176822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29464223-3	5.37512916786639	0	1.39046662897549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92381961-3	6.29979437071986	0	1.37602000239296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20847716-3	5.05751753777588	0	1.37176657197866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167319008-3	6.19540912690135	0	1.36433288739644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-49607304-2	4.4170117692121	0	1.37556865493404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98955269-2	3.38190751399934	0	1.38613334279961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115001310-2	6.96237490115266	-0.440467987208982	0.796001446099626	-0.5533507374481	0.580023264645881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08954570417147	1.85449916425446
Merged-chr11-5485937-4	6.47304500650788	-1.22673175360583	1.11707862910335	-1.09816061434323	0.272134361101403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.01087566452899	0.723581231604105
Merged-chr7-100458345-7	18.544125061169	0.142993309903077	0.473142028338238	0.302220689219464	0.762483833507583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93583346652046	3.89922162190714
Merged-chr3-15284127-6	14.3592285438039	-0.743520807202106	0.562723829734669	-1.32128900166301	0.186405019778111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68119145832707	2.97561767960118
Merged-chr4-119996648-4	15.4502720470071	1.74529364840524	0.572270267459314	3.04977166847013	0.00229015404558786	0.069238311325979	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16955778423466	4.40457402626836
Merged-chr17-51288904-7	18.7189685465692	-0.0806374016618264	0.462584591246907	-0.174319255737564	0.861614567030596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50031220256082	4.37402144993174
Merged-chrX-168648005-1	2.88141267608913	0	1.48856349016893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21154984-3	3.37070572237875	0	1.42412631267125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55427861-1	5.44435622903486	-0.573897561999186	0.735600750920098	-0.780175334624588	0.435287678504971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42775089836225	1.56203317187393
Merged-chr5-138998184-3	6.92790584200301	0	1.3612936186176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155169769-1	2.06670202663252	0	1.49658597434749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107864147-2	5.21692841712231	0	1.36794139345324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44866513-6	13.7431481493484	-0.373590859977481	0.556845147338569	-0.670906196746172	0.502280288487476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71191227640038	3.2118807493687
Merged-chr12-69127383-4	5.30580832147542	-2.53781897303997	1.16690967016346	-2.17482041492078	0.0296435766301602	0.420014762028323	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr11-81950295-4	4.58031933560975	0	1.41589466415759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28146158-2	4.9262383848826	0	1.37623789454043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3759067-3	4.73202968579861	0	1.39719924807925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118894046-3	6.01270055589039	0	1.35993321021005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93273540-8	17.5669324542781	0.155689282862398	0.48543475440934	0.320721335768049	0.748421577154658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28203908814426	4.34019997510019
Merged-chr5-23132468-4	13.5477152545729	0.795446900898129	0.628360605064668	1.26590829292404	0.205545917031582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64850223368472	3.2241876770508
Merged-chr10-57734114-2	2.36846181403428	0	1.48828406431179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84398735-1	5.23388592516363	-3.75388159163003	1.15642310170039	-3.24611432105635	0.00116991848944185	0.0406102165821004	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09942028614263	0.41385117919798
Merged-chr18-60757328-4	8.1842909993963	0	1.35661661414331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-30010780-1	2.5123616010434	0	1.440700081945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129840137-2	8.70422852907451	-0.065307700754787	0.522794649316075	-0.124920369480107	0.90058659217507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02529923499795	3.957788514721
Merged-chr4-46585235-1	6.38224261259247	-0.535630982005171	0.609733354669015	-0.878467575873278	0.379690026197899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07566324591474	2.83065438229811
Merged-chrUn_JH584304-67155-1	2.00998059333769	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6481618-2	3.16633651399031	0	1.4300463246463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70396454-1	3.10668663511895	0	1.40741231325419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64961600-2	9.0543171070915	0.229044992839252	0.577029115527052	0.396938363552148	0.691412913194841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9200336988247	4.21574223644542
Merged-chr14-70962124-2	11.226022392323	0.0418389867978247	0.498243017349986	0.0839730519864673	0.933077857474717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67600721765121	3.64720793272511
Merged-chr5-139398544-4	5.72333946884976	0	1.36462744666303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64016689-3	5.19357252430557	0	1.36623177477452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94720650-3	5.46128955983827	0	1.3783636398692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160353922-6	18.8291476893804	-0.0385497473035058	0.480796500048699	-0.0801789266344517	0.936094950302923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02530274691746	3.98861342598337
Merged-chr7-90060093-3	4.40996455580707	0	1.3819194759061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-179948963-2	3.87269180539612	0	1.39597436576276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39779409-2	4.00140639970793	0	1.39516811090295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91088022-4	7.43630368231012	0.658740059635846	1.04912122084017	0.62789699278822	0.530071421117006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	0.88866493597531
Merged-chr5-107936812-1	4.29308892245586	0.930920571108865	0.949756734504604	0.980167381065674	0.327003502960725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45575152610536	2.56522815119762
Merged-chr15-27647948-1	2.80232716839519	0	1.39765722526081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60437876-3	4.23022366213916	0	1.38281577008233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25214494-2	22.9357762813296	-0.932665495049183	0.568932306971479	-1.63932595076894	0.101145394222517	0.916818823502049	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67871683593548	2.62521729935294
Merged-chr1-173456549-3	5.64418437741859	-0.280551022388538	0.864026828519627	-0.324701748982978	0.745406810830005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36759862365701	1.30064958020929
Merged-chr1-9593952-2	4.59217453544542	0	1.39677026794649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58655474-4	9.63143584943465	-1.17219471884343	0.766785129778336	-1.52871342090618	0.126335503720978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19034116109929	1.60294768781932
Merged-chr8-68553467-3	8.22561473290185	-1.63836818556382	0.976167790174092	-1.67836738935181	0.0932753997425782	0.870996486130117	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	0.724326877898254
Merged-chr3-138012599-7	18.4251089012331	0.656059066152953	0.402769407679604	1.62887015161498	0.103340510025268	0.930403600283911	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47473348894548	5.25809695300422
Merged-chr15-84072363-2	4.67844998871399	0	1.38277234703115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68008330-1	4.99579800322909	1.10289784054527	1.20228945314554	0.917331377780756	0.358969019731581	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.25163494309627
Merged-chr19-4207173-4	4.57753119726835	0	1.37108556966823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44469775-7	17.529668619426	1.47419096458627	0.575354537688416	2.5622305344268	0.0104002258428834	0.206618626402439	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04450729412695	3.62102597528356
Merged-chr9-47661857-2	11.8347063575611	1.53949053733329	0.530996725932069	2.89924676019611	0.00374060376989871	0.100109854610795	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6588783116192	5.2284187977587
Merged-chr6-129499729-6	17.6788749854402	-2.14573244825469	0.478140542029788	-4.48766055090348	7.20095420959297e-06	0.000672571597730695	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26416507406377	3.04612046027811
Merged-chr2-158413482-3	5.48956995857089	0	1.36908481727754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5134301-3	4.57360747171854	0	1.44813695282269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20412161-3	5.63765717312682	0	1.37407205329279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159835455-3	6.90508593456703	-2.72694037873815	1.15853547847682	-2.35378236523527	0.0185834878093418	0.30496089415452	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0
Merged-chr6-54057165-4	7.37407702860451	0	1.36319108957739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102233079-4	8.14686653985731	1.46899893660341	1.17642723048419	1.24869511563312	0.211776608033067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.19104000664357
Merged-chr17-28967304-2	4.53355749010112	0	1.37821828554097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64370535-8	21.1093414516729	0.257736403453429	0.356393074015542	0.723180168877775	0.469569200829177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23357632821956	4.35984028603322
Merged-chr8-41298537-3	8.83239714210811	-0.19374632722098	0.77306982227712	-0.250619441657015	0.802108349076804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89200393807192	1.76271631669283
Merged-chr9-14075182-1	2.21161519057967	0	1.46218155675741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87658588-1	6.56390586431158	0.526514198621454	0.763922180934954	0.689224912905474	0.490681741501574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62235589016187	2.56721876174733
Merged-chr7-123203830-1	2.68171771848815	0	1.44571825951235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135815493-2	4.78161277578842	0	1.50702833777349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36573386-1	1.78770972620557	0	1.55497995345127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30494466-1	2.85074553343684	0	1.43602115817905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129894643-1	1.24574390499003	0	1.66912691709256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109657361-4	9.19655991953796	-0.646583297343589	1.32459548984665	-0.488136417721342	0.625453217278212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.303163067301871
Merged-chr5-121900732-1	2.24031896494798	0	1.41960739901643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122854361-2	2.64150194525883	0	1.44469781283777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106063221-2	4.84039230284686	0	1.36905883293044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21040680-1	2.35534196330041	0	1.41902137023348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16507257-1	2.93966324798242	0	1.46563074414291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39455579-1	2.40897282248216	0	1.4659355420917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12574509-1	1.67566806291831	0	1.56819527331368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44164825-1	2.1286869576128	0	1.44867219893853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56054004-2	3.92020227239663	0	1.47013939360841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-139413515-1	2.56809031438197	0	1.47562572486895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86959777-1	2.87028811704639	-0.257081790218358	0.932946284888811	-0.275559048127832	0.782886767060646	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84786608550645	1.70054887545773
Merged-chr8-77422737-2	3.32452924809208	0	1.38354016057188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79160181-1	3.622875356158	-1.18275289864814	1.31018518072421	-0.902737197801587	0.366665389334474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.303163067301871
Merged-chr17-56858364-1	1.80093030149672	0	1.45695259198438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128738949-1	5.48099892990765	-2.74907045274032	1.21616906330974	-2.26043445412012	0.0237943001694716	0.363018344909432	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0
Merged-chr11-20149786-2	2.21928681056777	0	1.49290040394608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131083096-3	5.24673622942356	0.00246892944765007	1.33560195267799	0.00184855184038902	0.998525069866718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.716426531808663
Merged-chr12-119215390-2	2.43496723169066	0	1.55181591724373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63817291-1	1.65071960314091	0	1.79644684259037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149679994-1	1.84198265408858	0	1.48344981466848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53739365-1	1.70155457523307	0	1.58459844223991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55231959-1	1.71251975173256	0	1.54251842751751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130805951-2	4.35271181338248	0	1.40059565577411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50504775-2	1.80083374961105	0	2.1439379428999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75561259-1	2.34639835356893	-1.71417719269436	1.55852854741459	-1.09986897290908	0.271389215080934	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51813409520205	1.55528346522961
Merged-chr11-59578400-1	2.59425331040231	0	1.40527174565503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87524969-2	4.91142556057099	0	1.4931148039681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143038256-4	12.5573785841547	0	1.3427806939679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19430356-1	2.95951914018951	0.937948044184031	1.36501265466478	0.687135054007521	0.491997626257391	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.39949824061849
Merged-chr8-106411726-1	2.19603457051402	0	1.4739387392363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141184204-1	1.54313534461138	0	1.88276529161412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18821186-1	2.50920093889583	0	1.44042989226882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45582964-2	8.06066792398416	-0.64530559215665	0.844359985539501	-0.764254113420988	0.444715824591454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80583195855415	2.05974799560294
Merged-chr18-77758560-2	3.82599412178423	0	1.44401736563217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-25358269-1	1.4255782328828	0	1.66640815550479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106229803-2	6.19290027372121	3.37180086403125	1.14483778367592	2.94522150833007	0.0032272352823762	0.0901950039664206	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.61141823534019
Merged-chr16-32918265-2	2.46098367197438	0	1.552849765424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116446167-3	5.25361422117534	0	1.35331500818309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5130288-4	10.1152295369432	0	1.36224590037537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125344146-4	10.8379319260439	-1.04547761810669	0.835372287725062	-1.25151101307633	0.210748098174089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21312207999876	1.30064958020929
Merged-chr5-114702766-4	7.2397518675684	0	1.36639721225087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99230550-3	7.83613339000832	0.433114886807543	1.13855102107382	0.380408851945037	0.703641944763919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.02674429890598
Merged-chr16-36621289-2	5.06035491223245	0	1.38921857491866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99220529-2	4.6410732360319	0	1.38825190937316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31394242-4	8.54847083559183	0	1.35830640099897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84293707-3	5.31183220626869	0	1.35565272282862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110384715-3	8.38076825303866	-0.000304431928012581	0.806039203329658	-0.000377688736174378	0.999698647995782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08703878056993	2.18460570167449
Merged-chr11-94198974-2	6.62071407378125	0.897909792293679	0.83859486025246	1.07073133267638	0.284290250136811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47209300585678	2.98515882793927
Merged-chr5-102019690-2	9.57470826514893	2.30566798299906	0.950779044720396	2.42503029047838	0.0153071095258092	0.271060575568744	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.31398673118996
Merged-chr3-97202112-3	4.51626392197651	0	1.37381051460815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87230677-3	5.29171150126939	0	1.36373291023384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25537905-4	13.7597959833135	0.28463659195407	0.620594310796078	0.458651629578988	0.646484354524733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94690055182349	2.79627586344695
Merged-chr18-30087459-6	18.778662482057	-0.0781571845165939	0.475318152777314	-0.164431305768392	0.869391620527121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13218557341333	3.75601802242555
Merged-chr2-127378968-1	7.38088457757497	-1.29807870473706	0.787793606939045	-1.64773957709649	0.0994061228650933	0.907798680076664	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47297379083555	1.70340695421451
Merged-chr4-141652512-6	20.3156490176739	1.19741273290896	0.456045016284926	2.62564591246589	0.0086484732392558	0.182713702608902	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9580951787751	4.70640049234786
Merged-chr17-26661939-4	7.01268445211641	0	1.35875366490835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122298785-3	6.85843011266074	0	1.38619996573977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79840889-1	3.32786322779155	0	1.37919309196933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10846702-4	4.66704627109037	0	1.3970296506202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6679919-4	5.71114502301539	0	1.37231089444647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13685009-2	5.69449369579247	1.2094158859387	0.932163870111523	1.29742840794077	0.194483823319217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.72097848263683
Merged-chr13-93749873-4	9.21730987088319	0.62438436438262	1.36707244921848	0.456730998228782	0.647864407403884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr8-123110837-6	15.9154127102534	0.147610409474033	0.524406602131402	0.281480837338972	0.778341623765818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01442254358258	4.76014831007586
Merged-chr7-80440958-3	5.51937404319866	-2.44936733592718	1.18823451846591	-2.06135009365785	0.0392696523670497	0.501329035467462	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	0
Merged-chr15-80704487-4	4.63645967445446	0	1.38127973551454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116139065-2	7.78488262006882	0.77519314136916	0.842790775388497	0.91979310168864	0.357680888907716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.49873523349828
Merged-chr14-70096386-5	6.8065029932062	0	1.38485504285437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41154936-1	2.05419927344634	0	1.46070271922949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15746101-1	2.8890449867781	0	1.43450826619113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145111834-1	2.05960164040641	0	1.49986494344636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102721376-3	5.85527100683386	0	1.38304053608215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99546334-3	12.4543504570264	0.172724631569864	0.666343911667639	0.259212440521278	0.795471332921521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18911587802649	2.85476293333406
Merged-chr17-72908998-2	4.76356178853484	-0.035290503910182	0.967667308785043	-0.0364696663716903	0.970907865341112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	1.06872581468896
Merged-chr4-110022434-2	7.41386239861035	1.30113911631231	0.820585445668144	1.58562295149275	0.112824866615581	0.979719955967469	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93653890829635	3.11223374861158
Merged-chr17-28709967-5	9.4719862359863	0	1.34965283866009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77837896-2	3.62524569486846	0	1.37473157325401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95612362-3	5.49775634904998	0	1.36047099596427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108742243-5	11.2899539318248	1.2665278593955	0.817249209620654	1.54974497923759	0.121202737676282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46981335012887	2.1891878115649
Merged-chr8-82917654-2	9.64889111309042	-1.04775158953901	0.631645353600127	-1.6587656088456	0.0971630329119516	0.894594394657991	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1976040549979	2.35585134365153
Merged-chr1-178463893-4	6.97392159670456	0	1.36509641648196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33916763-3	5.84948023382581	0	1.35696683284819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67473366-4	6.03311182617121	0	1.37630090728776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91182654-5	7.66935692981843	0	1.36710306696058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145675491-1	3.40547051922146	0	1.42441775616682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36188914-2	7.2917051388245	-0.0541473324225792	0.748301852807329	-0.0723602811077376	0.942315192982854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68840980050205	2.07322924255145
Merged-chr12-98383366-2	3.65434303904628	0	1.38542122345282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154755982-2	6.41145167525699	0.540640516842835	0.882750133101302	0.612450224100722	0.540239921173039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41081216695128	3.16431427751799
Merged-chr15-98476526-1	4.82493354753073	0	1.42470585886406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14650935-1	2.20944883404981	0	1.47966661511013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106566644-2	5.82597503509002	-0.677800295551619	0.779342531045956	-0.869707822363991	0.384460096324423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43795785835186	2.2007749952622
Merged-chr5-139746017-2	3.35620560666704	0	1.39639263155729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66851217-2	6.13316680009332	0	1.36473895734381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111325355-2	5.26991038801001	0	1.36773635536516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-4840300-2	3.47704327207429	0	1.37800975719762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132783619-2	3.09502868965187	0	1.45046893986633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-52256087-1	3.42096303949721	0	1.38434774471272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58996626-4	10.8358573584314	-0.818240861177706	0.576836684067494	-1.41849657585572	0.156045837679015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7266942667982	1.87167189675086
Merged-chr9-30423150-2	3.53781290234911	0	1.4157947000321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23225187-1	2.77779249775013	2.16531147630944	1.33785178264745	1.61849877870967	0.105555149811488	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.765562747387088
Merged-chr6-43642551-2	4.7294417595099	0	1.37348515285696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152015768-2	4.54403119833963	0	1.36841070161183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91848627-2	4.73485832760181	0	1.37480155508321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45585045-1	2.68452732147019	0	1.45006169705905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55665369-5	17.585317745382	-0.805129875711261	0.549261732245457	-1.46584010580854	0.142691852123176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20065085044376	2.97147924716548
Merged-chr19-8993073-6	19.8283105429248	0.0319442174642513	0.449649636217913	0.0710424626003038	0.943363960577664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97662535218868	3.97631199064804
Merged-chr10-80340386-5	11.0042961021973	0	1.34590738708735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82797070-6	16.3402195464164	-1.19148003507125	0.681787176855928	-1.74758352095412	0.08053617089003	0.797570725707987	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8919050357779	1.39207274064238
Merged-chr19-32665462-4	6.11040280476801	0	1.36762489817875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27662918-4	6.87687106050596	0	1.37008928771433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-9008353-3	5.5171528962305	0	1.37338293449659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118080185-3	10.9864880748864	-0.82918401164618	0.548738529029204	-1.51107306628008	0.130769836017436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32665360460964	3.56296843751513
Merged-chr19-45651706-2	3.9400059387743	0	1.39515678586863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64126137-6	15.5612128157293	0.436207822165899	0.472594504361292	0.923006548193848	0.356003792779938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85111992499388	4.3926952391034
Merged-chr7-99539540-4	10.0804877268752	0	1.34502914941359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81518853-4	4.85712786378313	0	1.38408335983988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55751710-3	7.20767397000778	0.0674727948660166	0.596894663086288	0.113039702042474	0.909999079240035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93807335876715	2.92542389968754
Merged-chr17-64751377-4	6.83812869536254	0	1.37981122127106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83742969-1	3.42464402165284	0	1.37833303594742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64178664-1	2.38879271790037	0	1.42017314866513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-109509212-3	7.64335536838562	0	1.35111829610293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112258770-1	4.91498056254138	-1.81100220742452	0.968899782804608	-1.86913263844723	0.0616043631474114	0.677927325114494	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0809096629604	1.28067447403188
Merged-chr16-49278682-3	3.56952885523927	0	1.414172154521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46627527-1	2.23015489995509	0	1.46557616606688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30357967-3	3.51927901999209	0	1.41744515350551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102640204-1	3.83050864369272	0.327398079036355	1.18852853458115	0.275465055747891	0.782958969145108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.662147012823607
Merged-chr15-75791345-1	3.39323203285727	0	1.46877269342784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171011874-3	5.18666140944265	0	1.37212527409408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87028959-3	8.61858925397246	0.189643042399124	0.55734202412934	0.340263310837503	0.733658244175246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69916234073872	3.46102392680577
Merged-chr16-45763883-2	5.19321968144863	1.12091442604423	1.05629540781149	1.06117513884362	0.288610315482805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.66569775432524
Merged-chr17-71873039-2	6.81005316390257	-2.04154835938908	0.843541892878621	-2.42020980418911	0.0155115546312973	0.273320129077048	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54421640168847	2.11518404902724
Merged-chr2-45099220-4	6.61215897087266	0	1.44446293996827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45574011-2	4.41064759002077	0	1.3894312434996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61612748-1	5.80710236632112	-0.419010754571531	0.640648112486852	-0.654041971566926	0.513084765287692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49633535099465	3.2648465719804
Merged-chr8-86828202-1	4.35353514977198	-4.91418588533059	1.08467134093719	-4.53057594486139	5.88231041452701e-06	0.000569975956904231	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61002370573513	0
Merged-chr8-116951088-4	5.22362053212435	0	1.36750970381703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79971482-2	3.3964610245852	0	1.47820968836806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32323950-3	11.8438689037011	-0.917139868775752	0.578099716037703	-1.58647348084139	0.112631943230849	0.978513633064683	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84465541889156	2.5529341069679
Merged-chr7-6937278-1	3.68499876483484	0	1.40030641767154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98193786-2	5.88198296192603	0	1.37182569169695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43118976-4	13.1914164250534	-1.09497852525268	0.768018787258073	-1.42571841134499	0.153949639839824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28439392801156	2.15854700561521
Merged-chr9-64091343-3	6.20955525828892	0	1.37423679148418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23535863-1	3.80615807189443	2.11288040792306	1.27046354722874	1.66307834060401	0.0962967548816402	0.88902773413911	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.953310774576147
Merged-chr9-37246357-4	6.54001175501698	0	1.36135935693853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120510151-4	6.57710658730023	0	1.35245986793416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44233113-3	10.4500057437666	0	1.35827492456954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164083830-2	4.25761405154238	0	1.38512930127812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118703347-4	13.9490438499076	1.41558587204804	0.610712069062508	2.31792680013853	0.0204532996384565	0.325474506746738	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24880038725541	4.54195927748422
Merged-chr2-35327487-2	4.485964582757	0	1.4122042542955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145244465-4	7.47388301668527	-2.22867820509884	1.19922892204149	-1.85842599701888	0.0631085433484965	0.688229886433895	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr14-25855513-4	9.33801952995165	0.775502159682065	0.827454513843248	0.937214247681263	0.348648362370326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.03845169603776
Merged-chr17-64894932-1	1.84743863758331	0	1.51773911428043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26476251-1	2.73043395043573	0	1.42999205938642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99218586-2	4.32164005146233	0	1.39116484006531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33883255-1	2.69535567553772	0	1.48888450642614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45883434-1	1.87183172873753	0	1.50211783254371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58585542-3	3.75058471330898	0	1.40174896738736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-57310583-3	3.56299177764248	0	1.39506584066414	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101119626-2	5.2623498305042	3.7631965198508	1.08395785076533	3.47171849642842	0.000517138304160553	0.0219275515412352	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.21206588080071
Merged-chr10-121961648-1	1.86834261547624	0	1.57794636044402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95047244-2	7.72150964812735	1.04014055074955	1.03364469467673	1.00628441872365	0.314278773468726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.338064021838
Merged-chr5-139284789-3	4.13025248748988	0	1.37757453209195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21037232-2	5.3488206223081	0	1.37595450568399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122864010-2	2.58855327385917	0	1.43450807307525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48350421-2	4.23641341313501	0	1.42037948420087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72854765-2	4.87987137164996	0	1.41477924380704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134577838-1	2.28795179744094	0	1.42876435208208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60748132-1	1.8649398915125	0	1.66107348074836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115640839-1	3.88756346988311	0	1.38308549160173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107130841-1	2.32238144845766	0	1.42334339614476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24718563-2	5.93308804585332	-1.86284834883432	0.763544938946941	-2.43973635841723	0.0146979841586996	0.263460932552523	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13962876939035	2.14086229696128
Merged-chr9-103272189-1	2.015594026503	0	1.48373018365242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87750148-2	8.0391399880011	1.10584717708753	0.713460943961125	1.54997577155083	0.121147331377259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27643187026249	3.45020926949814
Merged-chr8-40304921-2	6.32176693207866	0.775839400352127	0.844145394631535	0.919082666666419	0.35805233476861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	2.91251139439735
Merged-chr14-27096504-2	4.80114459303275	-2.08652122319599	1.17105531207251	-1.78174438191421	0.0747909258023071	0.762769218703117	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57612722179308	0.303163067301871
Merged-chr18-4335777-2	3.07738858634056	0	1.45237311696709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91165222-2	3.1833523702496	0	1.40511826416233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41932497-3	3.30151652515575	0	1.37932605074044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-141874091-1	0.918843203902558	0	2.26988615516095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8424403-7	13.9231693538959	1.78502980992339	0.534273121496456	3.34104363124924	0.000834641056528426	0.0312252258718711	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67883239311636	4.38962430727248
Merged-chr1-152573875-4	6.57477987726976	0	1.3560468421632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91082590-5	16.0675585406633	-0.96320935063124	0.53690517168593	-1.79400274280592	0.072812731048739	0.750056485711688	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08475550381779	3.06567876177911
Merged-chr7-133046756-2	3.50880198007732	0	1.44154803685686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-31981072-3	4.78919901307756	-3.05792163207762	1.17797491456074	-2.59591405069768	0.00943396607214634	0.192972998311547	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84001395625789	0
Merged-chr4-59837933-3	8.39754874234754	-0.50485211423396	0.637484568539109	-0.791944055039488	0.4283932975889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01797631141003	2.37002497856059
Merged-chr9-106343561-2	6.05656406863467	-1.5135305172223	0.699011407334239	-2.165244374186	0.0303689757571191	0.426680577198562	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46443333361485	1.93887912158102
Merged-chr8-82459207-2	3.42440396408915	0	1.43716892149523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-99001186-2	3.71370817043359	-0.707900480826947	1.42900228304714	-0.495380930615068	0.620331252902238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.303163067301871
Merged-chr2-144217443-4	5.20622377268653	0	1.35896264573164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6411192-3	4.98168928739074	-0.692717809267965	1.39832434275453	-0.495391368145244	0.620323886621646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr4-148657814-7	16.4777813630533	0.568526800756516	0.461664054181365	1.23147296309357	0.218146022690005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1817929834363	5.01963916521089
Merged-chr11-99447278-4	7.35767267791044	0	1.36414996746563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125123449-4	6.50121746386522	0	1.38064827578361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67133869-3	6.53441867579035	0	1.40875966682468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170507926-3	5.08811621775217	0	1.35609785166486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88799484-3	5.64237325868963	0	1.37319003409771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-11997463-2	3.99047705043885	0	1.39359789386691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64204259-4	7.25243190639578	0	1.39360590868418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44345558-1	2.64442948880098	0	1.43926031769567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53873847-4	5.51722836025393	0	1.39141029354983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58180929-4	6.50171045705115	0	1.4084292620142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117479958-2	4.66511134317289	0	1.36076827380645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19316342-4	5.10408117278598	0	1.39530171163916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117066871-1	2.65844086417574	0	1.39915739902017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43283366-2	3.62972162643717	0	1.39866172010301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52988076-3	4.30460352588742	0	1.37086137441878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5509465-7	17.9745186606481	-0.558890417995731	0.50588880717738	-1.10476928935051	0.269259570905312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14552405258537	3.66839784411194
Merged-chr9-100434586-3	4.33996966188608	0	1.41957466395408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159757373-2	5.88622271872626	-0.0366917080365077	0.978666860698716	-0.03749151985213	0.970093101572517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	1.27673210875742
Merged-chr8-70844703-3	6.78273199585974	0.282345495983049	0.806514490627977	0.350081119761662	0.726277819698038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56104072393284	2.00484654695269
Merged-chr14-76991907-3	8.01416223190095	1.26805518596394	0.880886851555232	1.43952107325152	0.150002943719962	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.28358877055452
Merged-chr11-59624471-1	3.28739118025381	0	1.37619537555728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24449284-4	10.3277080243463	-1.35370887300832	1.39962338561024	-0.96719509471335	0.33344651390927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr2-3349129-3	3.77097007900771	0	1.37631992359235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11630225-1	3.44557996475865	0	1.4057478007461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-47934698-1	3.76220357949556	0	1.38773651337578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112058294-2	3.47897241896527	0	1.39029645448002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108980868-2	3.53772642446638	0	1.38690284407876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63625018-3	5.81190270993154	0	1.36943439869004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88214012-4	9.26546177772187	1.25266053556665	1.36481542820189	0.917824131880601	0.358710946227468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr13-81051771-3	6.66162016010434	0	1.35595787940506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71882683-4	11.7923475932913	4.73082634393909	0.980448872676658	4.82516373446764	1.39888297369421e-06	0.000170116061671238	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	4.65731706249383
Merged-chr19-16142618-4	5.47623728410114	0	1.36941848311744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104420833-1	4.32124248647967	-0.687820512771481	1.44284321782298	-0.476711886832231	0.633567297237855	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr7-75684715-3	3.0370665917883	-0.689751232685355	1.42554172167806	-0.483852013726698	0.628490898066226	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr6-125149409-1	2.16964021660447	0	1.46746860679849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105051627-2	2.92863918373938	0	1.4294905041558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88379054-2	4.97567326273829	0	1.40926292498214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3400147-1	3.1430996330742	0	1.46925583254336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47690744-4	7.36272812189335	0	1.37250663169208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44895444-2	6.81709631329626	0.35713685774771	0.711073689999551	0.502250136336693	0.615491579757758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36173837884825	3.05564277081552
Merged-chr9-56258611-4	4.59847486151397	0	1.38768377496721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11743748-1	2.99277834697763	0	1.43907206767984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40963124-2	3.68485435783424	0	1.43381220422366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129380003-2	12.2828211904019	0.237535082657587	0.599596697599279	0.396158090277435	0.691988406496176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73535764563735	4.87680060863471
Merged-chr19-50920234-2	4.84756176110762	0.651713460698818	1.14937565330774	0.567015195443962	0.570703857778732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69810662458968	4.19488664357859
Merged-chr11-62921215-2	2.86075896272359	0	1.43714170547202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91377027-8	16.9728926554556	-0.0479636161796515	0.505068363022933	-0.0949646022027194	0.924342943163852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91040974120305	3.25327732339499
Merged-chr10-20673939-3	7.08483551985165	0	1.36801982045305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38709765-2	5.74630779152062	0	1.39652305869472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16038046-5	14.154188570145	-0.445365964717454	0.529315546206165	-0.841399743328127	0.400124029227391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1899736634197	3.97339858712005
Merged-chr9-26783601-3	5.27159232370618	0	1.37895242364889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45745836-4	8.74459441759505	-0.131915159088254	1.15287263915834	-0.114423011361046	0.908902473363039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.577068348605183
Merged-chr7-113556392-2	3.99734556454003	0	1.38747823768213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23088670-2	4.23141842409996	0	1.39019565576042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145328996-4	13.3780432988951	-2.47874672358635	0.91960048394699	-2.69546043837145	0.00702914243276553	0.156725657712347	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37497176722538	0.577068348605183
Merged-chr1-87829779-1	2.87745666100395	0	1.42578334839034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117842533-3	4.95851455551101	0	1.37537635708391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36966989-3	4.37789152055495	0	1.46757005148711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35156917-4	4.85741795280181	0	1.40804050121602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66342577-4	11.6726993750184	-0.854752541703928	0.52412101218276	-1.63083051783064	0.102926086095322	0.928623919345333	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90415307382244	4.07822015606779
Merged-chr2-113648351-8	16.7414260202158	-0.242501043979467	0.495277272353524	-0.489626836351926	0.624397982801635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18678893689925	3.42626543444928
Merged-chr3-126621468-5	20.4783008760484	1.2453897933684	0.420455718979992	2.96199988999952	0.00305647893127788	0.0863102016754983	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70953046430998	5.02743983134495
Merged-chr13-120259878-2	7.11038469330661	0	1.39306753352267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82961530-2	8.4372627948459	-0.222950357735662	0.617927680715395	-0.360803318403774	0.718246481944095	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74298175707422	2.92261883389311
Merged-chr4-145239466-2	4.66784230754131	0	1.37656717487851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60739820-2	4.92888497523599	0	1.38197910045062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45019070-2	8.72537286929846	0.181881003020898	0.631427573758204	0.288047292484167	0.773310537866947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31260716574699	2.91251139439735
Merged-chr3-55153128-1	2.9640199156799	0	1.37323828109136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67157108-1	2.83880889951197	0	1.40697976400819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9883221-4	5.84524256833751	0	1.36126515307969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113669860-1	1.92863313837731	0	1.43938719305381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26601067-1	5.2748619703623	-0.112909263149705	1.00957198763598	-0.111838744074203	0.91095126688628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	1.30281892590853
Merged-chr14-63145613-3	4.68023591173367	0	1.36822592707306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108576902-1	3.73557706551265	-1.26170799092373	1.07774134146318	-1.17069647640202	0.241720802062419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86944151270285	0.94927122251658
Merged-chr1-156538002-6	12.2232618213334	-0.576555793366371	0.721023718683817	-0.799634989010954	0.42392230924267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28704604081273	1.36961656753983
Merged-chr4-150176713-7	18.6590527392644	-0.469692372402613	0.39217198191126	-1.19766937483284	0.231045756355747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8217916103542	4.25926206315404
Merged-chr3-93375419-1	1.81029524452648	0	1.49425521195023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131345596-1	2.5765718140873	0	1.45256820682681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99488971-2	3.48902839886564	0	1.37512006716162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118470476-2	4.59919415922151	-0.0185135877316407	1.03131699612838	-0.0179514036917279	0.985677621391756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	1.14478899401529
Merged-chr7-83062164-3	15.3476474904646	-1.14776140274711	0.478054989253224	-2.40089828272694	0.0163548819529505	0.282054260177803	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86310819900297	3.48152319301389
Merged-chr1-161295716-6	12.679527749111	-0.105958728854066	0.667075304607945	-0.158840730757288	0.873794357663765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07182627294176	2.77392354342484
Merged-chr5-110815638-4	12.4346854908369	0.635932359678099	0.611319855579749	1.04026125419239	0.298218540018462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19029452642185	4.25418637037509
Merged-chr9-46066897-3	6.42173549735627	0	1.41380771949065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56076065-4	5.5641014132536	0	1.37033832757297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32303888-1	4.76786909266253	-0.187171990434134	0.767459129085795	-0.243885287620587	0.807319663968336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32843128278891	2.70089346712193
Merged-chr18-26015312-4	9.24775988607984	0	1.35782749946121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-26445173-6	18.3067718911343	-0.634492809501608	0.481610251589566	-1.31744041454153	0.187691041591037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91076287391118	4.25825922745691
Merged-chr18-39354155-2	5.39783377455685	0.392887611067963	1.20099702830905	0.327134540558465	0.743566128189873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.02186287315087
Merged-chr12-95738347-2	3.401778731252	0	1.40439903361785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8161960-2	3.40600323303578	0	1.39784357677845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65742259-10	40.1070614094555	-0.961251203590886	0.337976631175316	-2.84413511149611	0.00445321597781832	0.113117928662723	C57BL6J_F1_Control-BALBCJ_F1_Control	6.59476909131788	5.66840940991125
Merged-chr15-58882503-2	4.98620891357527	0	1.36633522114425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41367067-2	6.22934608663096	-1.68203851350896	0.971246886841278	-1.73183413640515	0.083303098326782	0.814437611860709	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30670691456252	0.97908007631626
Merged-chr2-26055276-2	3.57248759010004	0	1.3814493227489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12626271-4	6.59241707746798	0	1.36001204843427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145765185-4	17.5053182321431	0.870506245149764	0.545958245256899	1.5944557165542	0.110834001684775	0.968777214597633	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49071432843917	5.22882510492862
Merged-chr2-148073345-3	7.44218860495326	0.476018315214065	0.767251746855633	0.620419982313357	0.534981320059399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9071925850333	2.2200817938085
Merged-chr10-25443794-3	6.06843550994687	0	1.39166936646068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155373468-5	12.7702109299333	-1.82920172299555	0.494473767800259	-3.69928971385687	0.000216203691605263	0.0111188424521954	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61534328059308	2.33386953669033
Merged-chr12-3264607-4	6.6779627594928	0	1.36051064836233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133346636-3	14.2398995157325	1.46531863278126	0.724597578336457	2.02225162847682	0.0431503630531978	0.53321865873074	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91285904552105	4.89315867569321
Merged-chr17-34924530-5	17.0466126562962	0	1.34698275811748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4469825-1	3.21387692670926	0	1.40621251572142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27697310-1	3.13120264000503	0	1.48797521613527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43040222-1	2.63824662229594	0	1.4473012793972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193799202-1	2.31850605709056	0	1.48891839160666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51790271-1	1.96966872065102	0	1.4532135951077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63099827-2	2.52082556020784	0	2.14473951478826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122114420-1	2.73869178781478	0	1.38336758720098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115071115-1	2.27896342967544	0	1.44887899877022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100950034-1	1.26737642078775	0	1.60739484926661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106030538-4	6.28400661047012	0	1.38016325094715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51333090-2	3.48180514272239	0	1.46522517758932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63548706-2	3.86420567432119	0	1.39453472965528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75075539-1	2.73967758041912	0	1.41043745985654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189659969-1	1.20521962741427	0	1.7105527889174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71811767-3	7.02816236178982	0	1.36823531728755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131895277-2	4.69579352929177	-1.87416153685133	1.30545539314718	-1.43563812803524	0.151105339403091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr6-84737140-3	3.81253704618009	0	1.40745006262846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51936312-1	2.64442247393087	0	1.45344553748085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52526098-2	2.17942022799731	0	1.45612808038406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123053390-3	5.03685902038786	0	1.44151767072914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103029881-1	1.88393024314189	0	1.60286662096177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98789382-1	4.5787736307331	0	1.38888815854296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57431446-1	2.19309738004574	0	1.42242243158379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3766053-1	3.56941505108832	-2.54885354793155	1.19584918240518	-2.13141722671508	0.0330547849230506	0.451124214626007	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	0.303163067301871
Merged-chr2-118892428-4	8.06878675438278	-0.0238372264593953	0.833453285888182	-0.028600554899718	0.977183169520666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.35339221635894
Merged-chr2-128055136-2	3.32062867936336	0	1.40092616657945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10558890-3	5.83939036084188	0	1.40366717937114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122233832-1	2.36397696943261	0	1.43891741446789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44759861-3	10.4612514054359	0.639701894271911	0.648023916836253	0.987157846573054	0.323565263132218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9868467483527	3.01460472101694
Merged-chr7-99887484-3	5.12175570282349	0	1.3805468406709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121409826-1	2.29368016479233	1.79338080210106	1.35880613856104	1.31982094517193	0.186894806818576	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr5-136975707-1	2.77268518563143	0.754911518002261	1.0983268183124	0.687328676142313	0.49187563207854	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.99374635525727
Merged-chr10-19691470-1	2.8368073730134	0	1.38556550202046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125380941-1	2.69080630892921	0	1.72387858335648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75637219-1	1.70022416288956	0	1.53610097373923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104401662-3	7.65649716574363	2.12823633654706	1.26954637559241	1.67637541838828	0.093664680722163	0.873780398039481	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr11-106673672-4	5.33123762054493	0	1.35472578991471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80497899-3	11.6766858631976	-1.1468598876828	0.586598874563971	-1.9551007296686	0.0505711821685077	0.593864526139103	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63836288260326	3.48947760569419
Merged-chr15-53255986-4	5.22708189639788	0	1.36087398046604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31662170-4	4.38886820653194	0	1.36554885129946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12783023-3	4.88308411323756	0	1.3716812695686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73685425-3	7.31668787035554	0	1.39685619681616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16107904-3	9.04827833649401	-1.40092212324093	0.876659366224561	-1.59802333405068	0.110037784143732	0.96551101056988	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16286647593625	1.02674429890598
Merged-chr6-146668982-4	16.2841686481819	-0.541746085194745	0.413609757406941	-1.30980006030596	0.190263482751991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67473006682429	4.07169388248204
Merged-chr15-34456321-2	4.36939107711553	0	1.39464190058376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95349182-2	8.53908566468143	-0.134786452851829	0.814877707549119	-0.165406970399549	0.868623667660665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83466705965869	2.168652725894
Merged-chr17-47515703-2	4.23941535101205	0	1.37877860195005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42820164-3	4.08111043881659	0	1.37238838700157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59584990-3	4.33242885428377	0	1.40238676785801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-18558927-6	14.791631159007	0.140839348883184	0.587703239508053	0.23964364906526	0.81060652349839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47218699191149	4.41370815156147
Merged-chr1-156624396-6	20.9309874473363	-0.0879014924601818	0.429504367127063	-0.204657971345324	0.837839359299307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41841015103432	4.46783954759574
Merged-chr15-67124908-6	19.068948260632	-1.14813948272301	0.47748559233579	-2.40455314495769	0.0161922516484797	0.279976541517202	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02048168841453	3.0146896071546
Merged-chr2-119993462-7	20.1505253497314	-0.918923458820788	0.52284037420907	-1.75756025003022	0.0788223618188593	0.788137114614118	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20008569793247	2.69648965452194
Merged-chr3-104501849-3	8.65565113262805	-0.161198525326402	0.711387628065525	-0.226597313429176	0.820736881532885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73916616373922	1.72935467496914
Merged-chr19-12830212-3	8.65771861751622	-2.29781961562564	1.02401648622422	-2.24392834152331	0.0248370122871768	0.372415392037384	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51813555892491	0.71701424649985
Merged-chr7-25577063-1	3.03733473978455	0	1.38855324601224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150589230-2	5.08382112966963	0	1.37337111903265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-32249750-2	3.33034348736928	0	1.40747025291642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113518646-4	4.5051636062568	0	1.38250627214452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45221304-6	16.1847560670492	0.456250841240734	0.512507762842991	0.890232059529815	0.373341293462894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0798628453816	4.61823560209543
Merged-chr14-51063924-8	21.9154218561594	0.395490587521342	0.39935620076247	0.990320387579439	0.322017544591152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43697085526589	4.78610170294491
Merged-chr10-14034239-5	7.01527061649131	-3.730538343893	1.1161532911509	-3.34231720093423	0.000830820583115608	0.0311037025327695	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67800608098903	0
Merged-chr8-70014551-3	6.42411783594148	-0.00714030908906935	1.15136128497826	-0.0062016234019925	0.995051852153394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.724326877898254
Merged-chr12-91184681-1	4.28909024397958	0	1.38137484158844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62277942-3	4.02917356585647	0	1.37124410402569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39656598-2	4.86979853047509	-3.2101979125357	1.12476289127576	-2.8541107974273	0.00431574767592448	0.110608075396312	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26679362495833	0.679405493272835
Merged-chr11-69110902-2	4.55075371097479	0	1.37718401044128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-74938858-2	5.59723707856154	3.37254976418505	1.11825209487804	3.01591186784487	0.00256207716896613	0.0751336879132284	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	2.97084007830362
Merged-chr13-103505220-2	2.87219670414461	0	1.44343041295619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27534904-5	13.016405746834	0.395805742177926	0.510976112529426	0.774607134213408	0.438571840392809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50847567309231	3.94223204944446
Merged-chr4-156209738-3	7.3695721650906	1.09341365924269	0.892981874783473	1.22445224267046	0.22078167168757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63093322119568	2.17800895049633
Merged-chr19-57393581-2	3.93838657850467	0	1.40369669853842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117469558-4	7.40605732598337	0	1.37362631838453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36782206-4	6.20787809823711	0	1.37883020208577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18617722-4	5.522515120293	0	1.37129354280156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74992740-2	4.07688049864154	0	1.44867466752074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17816357-1	3.98065039237355	0	1.39024682397311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85781868-2	4.21733296163584	0	1.42418764179043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33744873-2	3.34269993871512	0	1.39548401757143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16141089-2	2.12477701879872	0	1.48912511975081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84703536-2	2.63584663770798	0	1.41116308293424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113340817-2	4.69423034211697	0	1.39260879167573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41978586-2	2.88745709912838	0	1.45412594336643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68087708-1	2.88489783746833	0	1.43073354865894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43031422-1	2.94533482415959	0	1.43936085804071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-25791019-2	5.17527516723568	0	1.37733027019799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48674692-1	2.33441721888087	0	1.51808952898333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142935205-2	3.43558164073158	0	1.47730605026955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75542075-2	6.24703481639246	0.495881932720534	0.732604929960939	0.676874960078379	0.498485292550857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17540470129796	2.82713797191836
Merged-chr1-34190224-2	3.54261525203703	0	1.44456795271502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86592257-1	3.88127398642639	-0.36272088214663	1.041969967428	-0.348110687913559	0.727757057950834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61477032079243	1.03838943879457
Merged-chr5-123369058-2	2.89895159395829	0	1.42850802185842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24096791-2	2.01342027949062	0	1.66555700310822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57960035-1	1.64414977725199	0	1.65085153636415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11716845-1	4.44429292664628	0.643080846206812	0.798281517737688	0.805581529720605	0.420484179062816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37544986530815	2.88112148356708
Merged-chr12-13563865-1	3.7355259120247	0	1.38915156890439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107097571-6	15.1826697403167	0.36413044423833	0.406205487146866	0.896419314263662	0.370028855636003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9786017444154	4.33000450098149
Merged-chr6-134433464-3	5.62144871183076	1.92617851104403	1.1325374634764	1.70076361547591	0.088987384058146	0.845424662481718	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.82070600302968
Merged-chrX-96122121-4	13.493154084835	0	1.37877338935389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45926141-6	16.5008519133521	0.361713479604588	0.5801220570368	0.623512716362107	0.532947648441254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18906277094882	4.62787358074725
Merged-chr11-46448039-5	8.91286539978508	0	1.34926798017419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161885913-2	3.9488973164927	0	1.40131178779484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27545859-1	2.97684600350928	0	1.41704121183719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118045256-1	3.70796145375654	1.76271693929562	1.31137288689509	1.34417674553968	0.178891239557411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.09266895777963
Merged-chr7-80298927-3	7.77595036441254	-1.87252937463582	1.29470455194416	-1.44629859516906	0.148093469627959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr19-42152184-3	5.05801966568153	0	1.36546237902198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9136278-2	6.24272725712115	2.10948289833318	0.872364366092167	2.41812134966355	0.0156008730832081	0.274064220491497	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	2.49468348121761
Merged-chr6-56384397-2	4.03179710345852	0	1.40689455109328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117558758-3	10.4472470873238	0.150754682724833	0.471746008554357	0.319567479090736	0.749296230490007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76518191795578	3.86094179689282
Merged-chr9-116096901-1	3.4253171659519	0	1.42413668916116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16193905-3	12.5150202924692	0.888747607061762	0.521041525192471	1.70571358344896	0.0880614193606613	0.840845019326574	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41795878044117	4.45482337699817
Merged-chr8-22843835-3	4.69083174285974	0	1.39649252949741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100152304-3	7.87597506319054	-0.565786296926782	1.21943500442954	-0.46397413135722	0.642666279470091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.465515277017237
Merged-chr8-37049509-4	11.5136325787178	-1.60372782249304	0.585925542098367	-2.73708467589521	0.00619863356115424	0.143322637920367	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05356304758678	2.66315906007699
Merged-chr17-48278567-5	9.96813094343696	-0.292014341662772	0.943315340831126	-0.309561743589888	0.756894252260012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	1.15716269587666
Merged-chr5-125405876-4	10.6080454111716	0	1.352569133699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60819358-3	10.643283392731	1.1427811996867	0.505402723283396	2.26112988126086	0.023751215511375	0.362790056299409	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46645636331075	4.44170472916443
Merged-chr10-93911592-3	9.36020424754157	-1.80766996159409	0.615043071092526	-2.93909491311406	0.00329172253676867	0.0917143748724798	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41194381826139	2.36581634083611
Merged-chr2-120098046-6	14.0971294638847	2.75488069645929	0.722094980702265	3.81512234551203	0.000136115478108619	0.00758882182000659	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81165705572607	4.54460318128311
Merged-chr4-135179323-4	5.8821869543889	0	1.36290486457604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58184329-4	7.39677500883179	0	1.36201643259069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128097889-4	5.76879497478204	0	1.36633160135227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156534107-6	11.9968854293905	-0.0208048139246499	0.535793357547195	-0.0388299213336501	0.969025989043077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27064576931242	3.42169639244918
Merged-chr16-4840436-2	3.37289243686728	0	1.39726224697951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25188953-1	3.00043485940859	0	1.4362291203009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-12961550-2	13.1684242213602	-1.22517110725368	0.500933468894651	-2.4457761026771	0.0144540729781308	0.260513578586941	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73747949076813	3.38166834079699
Merged-chr17-71594825-1	3.6358922775003	-0.111086774820318	1.007575332399	-0.11025158243585	0.912209854709772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	1.30281892590853
Merged-chr19-11601481-4	17.2325564946816	1.34700313938472	0.595040425935608	2.26371701933825	0.0235915250354665	0.360937717253849	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88056900113256	4.3924517927339
Merged-chr1-17607334-1	1.88002515884686	0	1.45295214023057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106460853-1	1.70828670903548	0	1.6344132439252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-65242485-1	3.10354223251372	0.534078542770747	1.1533521712703	0.463066317534666	0.643316832253506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.1442012793241
Merged-chr9-118679728-3	10.8416480086026	0.600078260682964	0.71297620770743	0.841652574372027	0.399982451770826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20200363041412	4.84183063574346
Merged-chrX-159156016-4	5.95457320833563	0	1.36594830403244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-76887201-1	3.88921280411665	1.8422267467852	1.12842176659015	1.6325693116963	0.102559609916781	0.926701767863413	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	3.2749421586114
Merged-chr7-45150944-1	7.95720260367855	-0.725031294573171	0.654611166950182	-1.10757550616051	0.26804518650836	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86829562625364	2.69669430345835
Merged-chr6-84640883-1	3.4640628181255	0	1.43275514697979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45376932-1	1.15327051249227	1.17925730180568	1.96675334677611	0.599595929880438	0.5487755603496	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr8-105121167-4	4.64302926714204	0	1.36288869105578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50802415-1	2.82392912984813	0	1.42178185955273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-9093345-1	2.34319651841711	0	1.54112773626045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129534411-1	1.57569740882134	0	1.70345915766987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24150411-3	3.49194143666121	0	1.41599389535326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84707850-1	5.72122079044738	1.42713930752628	0.887523104406072	1.60800242882839	0.107834646835451	0.955154565313394	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	2.66315906007699
Merged-chr8-106022703-1	3.02885944826602	0	1.37725978734017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192087255-3	4.46891524324781	0	1.37644654970661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35727247-1	4.24136530704419	2.13222300950295	1.17747381803211	1.81084536815137	0.0701647912998791	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.01784625364355
Merged-chr18-57717271-1	2.24973946983763	0	1.50039851368606	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17655937-1	2.54897595196052	0	1.51944733557015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-70659887-2	3.1636688642537	0	1.40811463533206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38316202-2	3.11924347634347	0	1.45162548486047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53850103-3	4.89844674022564	0	1.37317269811704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8804101-2	6.03352742606185	0	1.37866120156637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5409898-4	4.04636982475064	0	1.41591624827724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-12559397-1	2.27310867578164	0	1.47299350772297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42965843-1	4.63205037974418	0.496690980400447	1.14733628829415	0.432907932458864	0.665081656952633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01983817183747	2.06433119728902
Merged-chr13-101850978-3	4.36830982990948	0	1.39190631810659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24713739-3	5.05783148849745	0	1.3829839612775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43123574-3	6.33352370923477	0	1.40524860176347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96697934-4	4.53422301015978	0	1.37215007243425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20184677-5	11.9258668403886	-0.261208078887	0.97523061404669	-0.267842369922254	0.788820655366387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.730937814817307
Merged-chr15-81393172-3	5.19550263658994	0	1.36733719026514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122951706-4	8.47752575143903	0	1.35449829544495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16555954-2	3.4122125322117	0	1.37034832097518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113800846-2	6.93809802245049	-1.10128527287281	0.727909417549275	-1.51294274578919	0.130294202712107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84678082177266	2.0616452534421
Merged-chr8-10964898-3	3.64584701738024	0	1.4232679885798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87187174-3	5.36338435707856	0	1.35766322280873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87391507-3	8.96234450311646	0	1.40141809437632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56121867-4	7.945942647295	0	1.35471828572871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12473767-4	6.10895561181177	0	1.3758449967486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9110425-4	4.53630663191821	0	1.38149074107381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57172465-2	4.02841479649744	0	1.39655728877836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79618760-2	3.36029993939948	1.78837481760699	1.30336069728269	1.37212578324287	0.170024284286843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr3-119814941-2	4.85154772181702	0	1.4059900133317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16220846-1	3.52645226471896	0	1.44199180782347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87324025-4	11.2989614381771	-0.179795844802273	0.612941685999834	-0.293332708329324	0.769267855015042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38965051548052	3.5302167648831
Merged-chr18-31701408-3	4.69553721484764	0	1.38888823227519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110604768-3	4.99347352656222	0	1.37453298449251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85658707-2	4.54901234779243	0	1.35872308097753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73646480-3	6.09078745666229	0	1.36072675543968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68073604-1	6.47016475104636	1.49842575006711	1.00680970618486	1.48829092614249	0.136674186889123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	1.87845446409297
Merged-chr3-154540340-2	4.7546156275979	0	1.3842168915126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79058328-3	15.7028267681446	2.04003457619816	0.838974340595269	2.43158160802714	0.0150330613339984	0.267433175513079	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	2.87037298662004
Merged-chr2-101871369-6	12.5093808937487	0.424087591607777	0.520443377073957	0.814858273328574	0.415153440200038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58123398270497	4.14302003877032
Merged-chr11-19955860-4	6.04441169101113	0	1.36850840387126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103184048-1	3.40473063414323	0	1.41642779725949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45388809-2	4.92524675814855	0	1.35718512335623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41045312-5	13.8608894612192	-0.501049841071196	0.581397363536565	-0.861802740252165	0.388796076749316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39633142321475	2.50272089906209
Merged-chr12-25298726-2	8.23779937376172	-0.200891464145086	0.82709121871548	-0.242889127099042	0.808091288715396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75912454751757	2.24979923409176
Merged-chr14-31234153-3	4.7570755571117	0	1.36652687385562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65472669-3	8.33995687060547	-1.35009955570302	0.963659349016385	-1.40101329072466	0.161210098740806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58148496924487	0.724326877898254
Merged-chr17-24742355-10	26.9692304658165	0.455870108855183	0.332909142375283	1.36935292795681	0.170888980802061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91387993824955	5.25838877731791
Merged-chr6-90569873-2	3.19216448073796	0	1.4154155867147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54146280-1	3.93715644593822	0	1.38369522318342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8864737-2	2.6191598874382	0	1.50989980963851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80841137-1	2.62380866147254	0	1.45806473696471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34368299-1	4.91972264474774	3.68314328991801	0.931543546950236	3.95380688533154	7.69174982346719e-05	0.00470813238059848	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27465395918041	4.49507590641332
Merged-chr1-132194892-4	6.05447872898259	0	1.38938376037594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127746028-4	5.56793565498926	0	1.38249714956023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102731456-2	2.74086784668797	0	1.49197262703123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21468187-2	3.50773481733276	0	1.40313313873935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45113140-2	11.2939936402494	-0.0380977379474008	0.502257075088868	-0.0758530637734867	0.939535998903024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56134390254646	3.52582742821666
Merged-chr2-5698835-2	3.08018462642199	0	1.44141495791498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17449547-3	5.98161301743028	0	1.37478088009856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10703547-2	4.3379598168735	-3.25146539314824	1.17689395685303	-2.76275137128116	0.00573164081722138	0.136174066076633	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	0
Merged-chr3-33956377-2	3.28081923145255	0	1.39873349710866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12735170-1	3.13935738897108	0	1.39751947548673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66932538-1	3.05211520550722	0	1.42520126916208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47748497-2	3.63386614068719	0	1.39753765909869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61101564-2	4.31391937393908	0	1.43961817095319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48559860-5	16.4665061298686	-0.655799612687969	0.527930888296489	-1.24220731771176	0.214160080435992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80485910224662	4.04498824685265
Merged-chr9-95574090-2	4.58962332066822	0	1.36179305927734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72375054-5	11.7388736588201	-0.0456867796028087	0.601311492999989	-0.0759785570950488	0.939436157836781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64974215847459	2.55533259242382
Merged-chr7-16928467-3	5.84325002304981	0	1.35420797704284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34334478-3	12.2011691968789	-0.170479918855765	0.526963633083216	-0.323513631971721	0.746306285314438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72017641043879	3.29942964126358
Merged-chr2-154902609-2	7.75630520414885	1.76875313841731	1.00756672985682	1.75546997137218	0.0791789526614135	0.79016716666202	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10936615683937	1.63403505622407
Merged-chr17-71144484-4	9.83667556371078	0.583096402967339	0.623387026685136	0.935368203069539	0.349598577662205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44367328773085	3.29897710901805
Merged-chr6-90422695-4	5.0179908253981	0	1.3713503474251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79293165-3	5.72383726411553	0	1.3669923828023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37557899-2	3.94387367264853	1.77129606831259	1.31118205992225	1.35091542391728	0.176722526815358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr3-87562563-3	4.87058621768159	-1.89093442319624	1.30709460699237	-1.44666989908809	0.147989398849367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr8-11419883-3	5.07998900583128	0	1.36870154459217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139001175-3	5.08762098942986	0	1.38192798993648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58903068-3	3.48477324484366	0	1.44161447760534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122557203-4	11.4602047936468	-0.0377015430486236	0.730003525611524	-0.0516456999533543	0.958811004607873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50794861036089	2.74772071588831
Merged-chr10-42271589-2	4.63557457515385	0	1.3811936113579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14992918-5	10.0038967750455	-3.04601906677562	1.15067410308861	-2.6471605284238	0.00811708110359143	0.174401743758943	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	0
Merged-chr6-83450865-2	5.12628836829449	0	1.37121683446471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127011189-3	4.16069207581013	0	1.40015491557409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4660009-3	4.41257190069606	0	1.37558248007569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76088652-3	4.77413764576569	0	1.39835120688957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62044901-3	5.06883340275768	0	1.35914315827542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27242666-3	4.53166138333363	0	1.37484433303638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-40869414-3	9.40909734636201	0.696453540396718	0.645732670953159	1.07854778258113	0.280789369920519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	2.87677830500691
Merged-chr17-88041017-4	14.2412024061231	-1.87892836651752	0.572761490519378	-3.28047258347225	0.00103633336508111	0.0368919747167284	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88955189025764	2.9971648673087
Merged-chr13-63634473-2	7.93152738090068	4.28339961861046	1.12432933759667	3.80973748116056	0.000139114425858015	0.00772433204822865	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.42095800735954
Merged-chr17-10874513-7	11.3519513961837	0	1.34810629376537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5363191-2	5.00118599863781	-1.01119206991339	1.05257902868511	-0.960680426225648	0.336712875963309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.723581231604105
Merged-chr5-66076829-4	4.88489582369328	0	1.36974610012749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39542978-3	4.23843885019329	0	1.40858448585821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33316013-4	6.8889386970795	-0.0369451855202939	0.888407792231608	-0.0415858413707635	0.966828860427457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.39949824061849
Merged-chr4-81745267-2	4.4180484478026	0	1.43187205179643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121999780-2	4.62169971944675	0	1.39405976777668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77239869-4	4.28527859702729	0	1.3794637331963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124847455-4	5.96816465172674	0	1.37669058852742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34663283-8	17.4890670924948	0.130334257253793	0.461839339523643	0.282206919376387	0.777784852974855	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7790600095048	4.09045446436967
Merged-chr11-14449375-1	2.47520290790664	0	1.50259441152781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148646805-3	8.40053224495626	0.997238909770344	0.666662109087236	1.4958685909654	0.134687902683928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45448509329049	3.70378268252096
Merged-chr10-68132371-2	2.91674846821799	0	1.40605799801632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102640801-1	1.74566738421569	0	1.5253916761156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84218332-4	14.7161825349284	-0.426957221055118	0.646292336408965	-0.660625535848758	0.508852488598392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63051091633326	2.57170360761729
Merged-chr17-79055715-1	2.92083229248723	-1.02516838738586	1.81873816252748	-0.563670135981087	0.572978645264909	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.70656116796365	1.27743081564928
Merged-chr10-121484355-1	2.10889540735852	0	1.42369714440596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21568163-2	6.48293299629766	-0.397352826761125	0.876488827872302	-0.453346139876886	0.650299513382959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3022060396979	1.70340695421451
Merged-chr13-20797552-2	11.3980722226397	1.87443741347418	0.558540400049188	3.35595672812406	0.000790909426300848	0.0299812032805354	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48366051229539	4.72352431861029
Merged-chr12-88368858-1	1.5629396385891	0	1.66281469516988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116848406-2	4.73393923727793	-2.934672878586	1.1561776543708	-2.53825427908228	0.0111407006121173	0.215976228450101	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0
Merged-chr17-12314254-1	4.24335057476397	0	1.37644804306671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94838293-1	3.76130832510148	0	1.44956471147088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5507317-1	2.32332204877349	0	1.47653485264925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84149240-2	4.10935475496395	0	1.38825927208346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41359570-3	5.3694418175191	0	1.36095634677495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10297180-4	7.51242351837754	0	1.37992113199713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101596932-1	1.81276004939168	0	1.48590042319056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24628638-1	3.23886325924115	0	1.39588578894159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89340258-2	3.72348879045811	0	1.38354013578411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124440357-2	6.27479840098073	0	1.37181336415545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3300414-2	4.85386957083727	0	1.37846048817039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151619478-1	2.08754086643333	0	1.46420094245336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150872830-2	2.62346179029238	0	1.53500801195851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117886013-1	2.74633449285312	-0.938798082605655	1.31857865303033	-0.71197731014993	0.476478826583434	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	0.67591700901439
Merged-chr5-148342559-1	2.38547959620835	0	1.4808144183173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22229705-1	2.35166559053648	0	1.515420605614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105354252-3	12.5548186332768	0.408655048276783	0.452178798333889	0.903746592680872	0.366129786996079	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4773668687479	4.19062846956422
Merged-chr17-46347370-2	3.6986660653013	0	1.39807484732422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120494844-4	9.51682925962787	2.6856343422786	1.03045366579414	2.60626404798983	0.00915358664088012	0.18919384646829	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.9220913379402
Merged-chr13-3523626-8	19.9765499941025	0.514818407412185	0.416758692783942	1.23529134802973	0.216722092575614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44906501019334	5.01146820082688
Merged-chr4-33244145-2	3.98947779913155	0	1.42181829612833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77485461-3	6.08623743896568	0.549682228213197	1.18617897921682	0.4634058079297	0.643073516383994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.18909650862134
Merged-chr6-108426910-7	17.8126760679139	-0.0929741806879547	0.358782214257054	-0.259138209736735	0.79552860433876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98783109880826	4.81689407664769
Merged-chrX-98989782-4	6.36215119338424	0	1.37898273046375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10533787-4	8.81149998228789	0	1.37178788878776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145351432-7	23.5906549607577	0.270741072658107	0.392089650952029	0.690508081508206	0.489874729541734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66895742945608	4.92450148787521
Merged-chr18-21701974-2	2.81105593803042	0	1.41083801966571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29129005-2	4.29865534253187	0	1.38948122409179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54886391-3	3.99912963560115	0	1.40029981264465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34633506-4	10.4121099326507	-0.215043614094918	0.635698443553998	-0.338279283637496	0.735152733730763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94695553599345	2.60269977135712
Merged-chr18-4254880-3	4.54518676475568	0	1.37300507233343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115900884-3	9.56536502184988	-1.53902695166076	0.675872622599111	-2.27709615717579	0.0227804841297053	0.352396806978405	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64837690950518	2.70089346712193
Merged-chr9-46106306-3	6.97097411079484	0	1.37518344768455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74601374-4	5.98911508654807	0	1.37176939654775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102042435-3	8.50689599165142	1.37234187492684	0.83406698577809	1.64536170155039	0.0998952425856929	0.910802665500785	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	2.65193253043695
Merged-chr14-47360578-7	22.2205215046034	-0.30702380285739	0.423972771827739	-0.724159246203043	0.468967975174832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77851938563326	4.49660589325281
Merged-chr13-55696191-1	2.29690654546776	0	1.42040980989492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120363618-1	1.78281806629047	0	1.49334871620469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28722324-3	8.90442072231382	-0.813062246613099	0.571759441773096	-1.42203554014201	0.155015933827085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39794054181719	3.53955874194336
Merged-chr5-41563597-4	7.98040529691131	0	1.34720845271072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43613302-4	4.82162557313632	0	1.37396316880564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84454229-5	14.505280890209	-0.217023949180259	0.451078112391201	-0.481122766143092	0.63042924851904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16281434892043	4.09342179825926
Merged-chr16-5471209-1	3.37332218598609	0	1.37941680541755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113761920-4	6.1221408515896	0	1.36378140927722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94486158-3	3.8245680529352	0	1.44866051025105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66136027-3	4.82402914201537	-1.84611114673205	1.24177546689721	-1.48667065499762	0.137101816752587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8405601103675	0.465515277017237
Merged-chr17-65870319-2	3.65283218779472	0	1.40116975744009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34757085-2	5.08650498689905	-0.844673198249433	1.09164919875479	-0.773758822168259	0.43907342762727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	0.723581231604105
Merged-chr8-70620859-4	16.6481122992081	-0.253271641347796	0.38708472564973	-0.6543054390035	0.512915042438578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84040426908951	4.67822424204583
Merged-chr2-145754157-3	5.4706718927034	0	1.36579932318232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17645888-3	5.97020592927079	0	1.39874536663897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-103970668-2	4.20951854533708	0	1.43431881941684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35039395-5	14.0192410990849	-0.0349079788725315	1.10172028580306	-0.0316849742374368	0.974723277692551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr5-108566678-2	4.44983465885451	2.91572896293121	1.04288566537795	2.79582801809299	0.00517669397686402	0.126756715265023	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.85644275633503
Merged-chr8-83090281-4	15.4097561412667	-0.336033162261452	0.50608981157498	-0.663979306786868	0.506703555465847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32277979528981	4.01928701000608
Merged-chr7-142392014-4	6.0585186204944	0	1.43295982480124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116072738-5	11.2434549926144	-0.471656220852523	0.73191821642963	-0.644411097121355	0.519308890417896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15544236747999	2.96227705878657
Merged-chr8-106753667-2	7.90350458313459	-0.905799840856454	0.621688891821627	-1.45699859330339	0.145116768521596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55354499420446	3.76826032200965
Merged-chr14-57701979-2	2.91774281763494	0	1.43806229154193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72822612-1	1.96586408744928	0	1.5591642679314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82367002-1	3.08260833450891	0	1.38271604126415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148997655-1	4.99593981800942	-0.24733108448461	0.852771386444669	-0.290032109913737	0.771791672696889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33578942466974	1.46494528794689
Merged-chr15-88868034-3	5.78730916522023	0	1.36737038073453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44384391-1	3.36640499075467	0	1.40575228631002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-50804944-2	3.48191695098267	0	1.41266480114045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165210997-2	4.3188647773208	0	1.39650309714176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41434204-1	5.22854665976887	-0.567632835260425	1.10439521985895	-0.513976179046595	0.607268645198563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53307014239253	2.00407882264132
Merged-chr4-46457437-2	1.99783773963409	0	1.4452603263517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20792360-2	2.38367002067025	0	1.43252611756309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91726878-2	2.33268571966498	0	1.5438532481922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31108580-2	3.74053860652331	0	1.42348242602239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-14068231-2	3.88426305697726	0	1.44006984285273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72035861-1	8.30582599651928	-0.442836414700719	0.826000560772685	-0.536121203460765	0.59187478682815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71866449080396	2.59403288413566
Merged-chr16-36795079-1	2.60351269553528	0	1.39006210852816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62354114-2	6.95459573495423	-0.688302655093426	0.747951543512656	-0.920250330470479	0.357441958447219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51134589925281	1.38647389072186
Merged-chr13-51736575-3	8.34762673998215	0	1.3756742518645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28053265-2	3.69614695943731	0	1.42412277155018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120602088-4	7.11846991580112	0	1.35010708825195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25609209-3	4.87726160495222	0	1.42457583728782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51900005-3	4.29582511709663	0	1.37393271108494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161214725-3	9.20005579432931	2.62849626077651	0.869421737043937	3.02326954662243	0.0025005940457886	0.0739643887751208	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	3.269814341864
Merged-chr9-45252195-3	4.66646569097055	0	1.37327718845913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27612958-4	6.28609728316358	0	1.372082273974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81086786-2	3.29568490860424	0	1.42230852003091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74967881-4	12.6534641050292	0.307528027766654	0.575438975890177	0.534423354432888	0.593048664510942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73228483412235	2.57916216333554
Merged-chr9-47588566-5	14.8532497214024	-1.94819974066016	0.516501248499978	-3.77191680817446	0.000161998272008047	0.00871887531493609	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13653597738239	2.48455346096433
Merged-chr9-118807833-2	4.37079311943315	0	1.40779428590215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44776403-3	3.38891254354748	0	1.41123891534932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125771371-3	4.5445528887864	0	1.36729346417997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66896262-3	4.26417849055089	0	1.4051458081737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54079675-1	4.28905091874168	2.01215574049208	1.05317416879137	1.91056313392233	0.0560607458096256	0.638418679382282	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	2.48756742174724
Merged-chr5-39927752-3	4.46365131918665	0	1.38471073774132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49923598-4	5.50115225145178	0	1.36591983461525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9132727-3	6.02225012802232	0	1.36752029749529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46136527-1	2.44537926591789	0	1.46678229011823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121734012-2	3.08196790642121	0	1.39101601654613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11053997-2	4.43032102553425	0	1.37349212964141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38354228-3	8.04736751203619	0	1.35557982417369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-23723724-2	4.30852376703455	0	1.38755530371637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59550123-3	6.55343217548329	1.15035855590771	1.33578879780518	0.861182963802251	0.389137281426835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.724326877898254
Merged-chr5-97001572-3	6.98972952568244	-0.0357451534293418	1.38059043221592	-0.0258912075552841	0.97934411305178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr15-11765070-4	10.8776490546042	0	1.36592917097703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5401690-4	5.78813824006744	0	1.37180108244708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101153641-3	14.9593754558066	1.1745057616474	0.606379157087383	1.93691644562602	0.0527555578092179	0.61228567758334	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86273490322598	4.1960944289068
Merged-chr4-132824172-6	12.4612521522596	0.673327724156934	0.539661920575316	1.2476843343683	0.212146680453226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19951472846633	3.98151206751736
Merged-chr7-19306516-2	4.58988860670409	0	1.43060468345272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40147725-4	4.65681640951759	0	1.36061627994892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68195230-4	7.383237154943	0	1.3669051894883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36569550-3	5.46128727789141	0	1.35803065063518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111108879-3	5.85801151716197	0	1.35444075738982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129795538-4	5.78698390626907	0	1.37370874129869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-22994181-3	6.43439345025975	-0.0338497003713628	1.29655543544964	-0.0261074069383111	0.979171669195111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr12-118748666-2	4.93035199855173	0	1.39378696309627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54248577-5	8.76251604995171	0	1.35165419664583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99329667-1	2.99080824829834	0	1.40758702835372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169269298-2	2.88357048347244	0	1.44633149361718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89238485-3	3.86970388136586	0	1.40611220925358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43885657-1	8.01195953163739	0.235976632222151	0.708276011198596	0.333170442724461	0.739005628068266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83888390809294	3.94658806943796
Merged-chr9-47444973-1	1.4040692222023	0	1.71412769857832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96510602-2	3.14987643981448	0	1.53288412337929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8776545-1	4.22045802317941	-0.360837452281663	0.873790388642018	-0.412956536226555	0.67963845811776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7414873742332	1.95465925600843
Merged-chr3-64204965-1	3.09297011367579	0	1.38679812750294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94814541-1	2.51188888666367	0	1.43882339502786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38082020-1	2.54112091015991	0	1.44576630265204	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70249022-1	1.65371086647635	0	1.51743400708287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27178719-1	1.84786761055224	0	1.48460685677339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9115582-2	2.83645933600378	0	1.40480921850351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-12206647-1	2.33552549845727	0	1.47067640741462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66991852-1	6.75386336366609	2.9723645944408	0.862819146312269	3.44494510482856	0.00057117537789489	0.0237374024212449	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	4.15233607726943
Merged-chr10-111050446-1	2.41144818969885	0	1.4690069739424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82019156-1	1.7692559731328	0	1.7278962135232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31182779-1	1.86000774166851	0	1.73667432611028	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80232952-1	2.51172895106625	0	1.41547283329427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79768389-1	3.12164191137534	1.09954589817534	1.24485340318341	0.883273400195976	0.377088571972098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	1.06872581468896
Merged-chr19-58073435-1	5.12164040040559	1.49598829670236	0.995602254793893	1.50259633252042	0.132943169707495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	2.54769399737168
Merged-chr19-34753477-2	6.28004571810269	-0.612045598306928	0.808897319003821	-0.756641892521883	0.449264436063471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95160684218358	1.38647389072186
Merged-chr13-95493483-1	6.00597287436802	2.09043680949087	0.925036093557239	2.2598435067026	0.0238309651335984	0.363373754192784	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	2.78212186819732
Merged-chr16-32813616-2	7.05051154579588	0.0781902301168437	0.731716974328498	0.106858570813667	0.914901180637546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34385981813042	3.25849294956194
Merged-chr11-4422268-1	3.44491737625951	0	1.40482259998873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16565936-1	2.68180259380547	0	1.49178123310181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63711658-1	1.69630155390006	0	1.47532191822023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17801187-1	3.6624654422601	0.852065024039704	1.25768188682195	0.677488507203358	0.498096059540278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07844127098014	3.02594047916349
Merged-chr7-74500051-1	2.0185024438166	0	1.49847089451114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90805101-1	2.88925705799033	0	1.46447217960332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12538713-1	1.53907446799685	0	2.38208207307399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17236208-2	3.99523140089813	0	1.40415726310346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45119455-1	1.42927010559153	0	1.55987619663985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79092730-2	8.81890807860277	-0.0371183680103767	0.602484459771739	-0.0616088388809889	0.950874337907153	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96603417472325	2.94192706952432
Merged-chr6-17754610-1	2.57356657607827	0	1.42676946238569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-94721220-3	5.74729584974936	0	1.35742047837685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80041866-4	7.87399289024788	0	1.36484822334532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120073337-4	5.6654864376232	0	1.36024191189479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83654730-3	4.95749443272113	0	1.36867788501067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7880160-4	6.18590155571147	0	1.43578399495579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78903322-5	15.6290598247266	-0.403571049009142	0.454365979878182	-0.88820701126731	0.374429408041533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12075306912683	4.7046507455852
Merged-chr4-133688455-4	11.3405526425941	1.4768520880597	0.857084809327528	1.72311079602315	0.0848684908617706	0.822200373330064	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	2.34502298933502
Merged-chr12-55016565-3	5.66130493334192	2.59924677165799	1.13877337492296	2.28249696462551	0.0224600164851148	0.348730087436262	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.80109304687756
Merged-chr10-60741699-3	4.54478668828369	0	1.38613767537016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9507277-4	5.21191825008058	-1.34789890513782	1.36816493423549	-0.985187437135282	0.324532010337564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr4-3779857-6	14.198587725171	2.26482795315096	0.753859113177507	3.00431196434668	0.00266182237792912	0.0773764720009889	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64290788048512	3.65441127337783
Merged-chr11-108252144-3	5.0244117337485	0	1.37469615220234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58018433-3	9.34487436483598	-1.09091148197636	0.749528012710358	-1.45546459035138	0.145540686266703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79651160426718	1.64434148891112
Merged-chr12-40606117-2	5.96720058999142	0	1.36527415409073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44356386-2	4.12664167587025	-2.15417814637396	1.15642264069591	-1.86279485593401	0.0624911340566813	0.684463248990386	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57928534738074	0.465515277017237
Merged-chr11-80490043-3	8.77424720149942	2.39523380046972	1.20712779971147	1.98424210016721	0.0472288573363284	0.567612968371761	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18909650862134
Merged-chr2-133430767-2	4.6109605021731	0	1.43500831039953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97238695-3	5.56251132586748	0	1.38903439813178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163814996-1	4.36817325156687	-3.29459522331537	1.1842865026507	-2.78192415090549	0.0054037667673284	0.130726905965823	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84231959469675	0
Merged-chr2-6436233-4	5.55428213680609	0	1.37513987659001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140502513-4	5.9828761363924	0	1.35316080880259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124775847-3	9.15902465064524	0	1.35533566241688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35749498-6	17.1128953249152	1.38863152358314	0.400748639417855	3.46509354492214	0.000530047074955647	0.022401957159669	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0714204225784	5.36306827394263
Merged-chr10-12612650-5	12.766503763872	-1.27600030627154	0.538310307756315	-2.37038059254323	0.0177697827724799	0.296940553866965	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94048651215477	2.33014490457711
Merged-chr11-46780021-2	4.12409973071985	0	1.39328397739686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49093748-2	6.05207699529972	0	1.37126979277805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45960425-2	3.42180296585806	0	1.43592415775154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41461761-4	6.93740619096263	0	1.37714899970677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96476565-3	5.12437907556095	0	1.37513913369327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-11239197-2	5.3493280493901	0	1.45465822249461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136368771-4	8.58266041065506	0	1.3588141319034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118090157-1	3.30278250790085	0	1.41427453153243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129067771-3	3.54971273245967	0	1.39310820906367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81147994-2	3.76169701075011	0	1.44071999547426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43458790-4	11.2265676524206	0.486757458182456	0.490751410246326	0.991861557643073	0.321265064020841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28226228333929	3.64210843822855
Merged-chr6-31079091-1	3.93436689801021	0	1.38758431588265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-166351994-2	4.07151129583096	0	1.38154415390481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21284900-2	6.81696983113354	-1.05031057290971	1.10657525671771	-0.949154218417201	0.342542182206997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08320241899399	1.39949824061849
Merged-chr13-48566487-2	3.79314681918381	0	1.40306188409894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95250308-2	3.90324510792619	-0.0333622860772591	1.36044556736419	-0.0245230583843917	0.980435391313087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr10-111389128-4	4.65534406923847	0	1.36929770458768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38545227-3	5.46634753473133	0	1.37765405494858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69176589-1	6.62395975144859	-0.0352228887275996	0.739958428798551	-0.0476011723858461	0.962034097661743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88456143589366	3.0922737878332
Merged-chr8-86807839-3	6.90727833779387	0	1.37031534200278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84942831-2	4.34561539833055	0	1.38368701588223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61983419-4	6.97348126789301	0	1.37582331202771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101641698-4	5.3221851703196	0	1.37961794231096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81010545-4	12.5076775900083	0.316466797593971	0.53476893827865	0.591782309968555	0.553996370525094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08579303752848	4.05136296914155
Merged-chr19-43815893-8	18.8969954875045	0.723480875583597	0.486599482174078	1.48680979344893	0.137065054194236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24405543141491	3.81731022841133
Merged-chr1-58716476-1	3.62238719606221	0	1.38637488976651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56086451-2	2.36925946107296	0	1.51443211875317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53980079-2	4.94883426876375	-1.48890813826939	0.820099750210384	-1.81552078010929	0.0694439155025589	0.728604864467014	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36712499183181	1.49092140105159
Merged-chr17-81619460-2	3.11257099969221	0	1.4401765843557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113493172-3	4.12520861895649	0	1.37230613821786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18628280-2	4.70321759802082	0.276857699604042	0.966945189606407	0.286322019675941	0.774631494515546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6646566865835	2.94397285067764
Merged-chr17-17826129-1	3.72646824889736	0	1.43645347629714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120858392-1	1.2278313170911	0	1.55156561422285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64896771-2	3.95072070587868	0	1.37894970588347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-93597425-2	2.62925515762779	0	1.4423570513711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121846775-4	17.2977707147051	-0.741932982817528	0.416471492733334	-1.78147363208023	0.074835108736036	0.762933547596058	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95144121033304	4.32366763023944
Merged-chr1-94056202-2	3.61917665601977	0	1.46409526265133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87812617-2	2.75342333510133	0	1.4869948836754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49741714-1	2.89802749208506	0	1.39338887270185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14187967-1	2.48483259724036	0	1.44182066432668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17422752-2	3.30989105995936	0	1.4130158335591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51452320-2	3.79581161643899	0	1.38030968491944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19978992-4	5.19317422472365	0	1.38660431684228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18917560-2	4.03061191404479	0	1.39239311693238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14391257-5	17.460801136991	-1.33358841025123	0.474706837295786	-2.80928839754689	0.00496511466371664	0.122564691840735	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58156300986994	3.05298643670621
Merged-chr4-56059104-3	5.0918748000801	0	1.38033710413412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36762021-5	12.9432237237663	0.0883142533656977	0.579586683173241	0.152374538493839	0.878891537904219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64237242547876	4.46456857429034
Merged-chr3-7496754-4	10.7988723090728	0.933368664027237	0.592215584661297	1.57606231278269	0.115011443333459	0.990322675140738	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27807726653601	3.87661286081401
Merged-chr11-19830853-8	18.9243914727735	0.0865428914737962	0.373306559517579	0.231827942122514	0.816671653521421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.357924658746	4.34392374482001
Merged-chr3-123179196-2	5.94638431593157	1.77488160893699	1.01186167930785	1.75407532989201	0.0794176002516496	0.790815411628397	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.11378131411959
Merged-chr6-32183931-2	4.34990365269008	0	1.40175228503508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51026930-3	4.24633515786239	0	1.37308756382901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105026334-4	7.36498307921346	0	1.35678947065401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144617958-4	5.85704428262316	0	1.38438221746795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160209563-2	3.48636621821443	0	1.38171896150884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12815416-2	4.08218221869025	-1.28717619058528	1.37403809762275	-0.936783479884762	0.348869944741834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr3-45284119-1	2.8258345625176	0	1.44715891915408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149777312-1	3.12566976440432	0	1.40072815197148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149836201-3	4.93201188185527	0	1.38414969674025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78807651-1	2.93979262382929	0	1.52942662593301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79577928-2	4.22694707843268	0	1.3771514355157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17086285-3	9.0989165827196	-0.816668065148726	0.920133677271045	-0.887553716728227	0.374780859272461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	0.765562747387088
Merged-chr13-75878094-2	10.4084867387758	-0.584532726366106	0.526892835541469	-1.10939585231863	0.267259450878438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54667806205004	3.88253837941966
Merged-chr3-22126575-3	5.16002863859124	0	1.39678199251891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123126448-3	11.383190674502	1.88659959234216	0.60808632706146	3.10251934369095	0.0019188100746703	0.0604314002601406	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35950768455674	4.51813040243599
Merged-chr7-99102721-10	30.3143503799477	0.831063465841963	0.341918117702824	2.43059207106503	0.0150741755666861	0.267958505438029	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9453221010687	5.75093219393901
Merged-chrX-103553456-2	2.5709135857318	0	1.40207700447429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79257531-2	3.73826858348999	0	1.39980691820652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64198511-4	7.72934023758244	0	1.38698328558995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44611205-2	3.8811766558313	0	1.39531296599273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21159644-2	5.19926175991884	-0.040799559455769	0.896608696678192	-0.0455043093011763	0.963705340132805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5713323725813	1.54998568242928
Merged-chr3-149170082-1	4.8498535598978	2.99242368116349	1.1653619711632	2.56780618830099	0.010234435971143	0.204455039164189	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.81350735141944
Merged-chr10-71261850-2	5.59495242830248	0	1.39287347025277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35051174-7	19.276892202431	1.99677595894143	0.481701846463196	4.14525286461403	3.39438919854655e-05	0.00240254690682021	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54021653655567	4.98212972533308
Merged-chr11-79869985-3	5.97032997555379	0	1.36042109066919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66046710-4	10.7808295119849	0	1.36089052591482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82398325-7	22.5081611837303	-0.998468223585233	0.476367757840203	-2.09600294552296	0.0360819296525644	0.475947006547864	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93701478399457	2.71902775415973
Merged-chr11-8685353-4	8.33526788116651	-1.84386905693071	1.20705312363871	-1.52757904421994	0.126617088020684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	0.303163067301871
Merged-chr12-113042052-2	3.09291348886899	0	1.42162177204935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11687029-2	5.1319828990239	3.84795265749002	1.10283410769344	3.48914912102053	0.00048456074915087	0.021010497040114	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.277269395796
Merged-chr1-151703032-3	5.90519504073741	0	1.38849168837897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141737031-6	16.7778161453787	-0.214216139587309	0.479086940547263	-0.447134165967057	0.654778191649463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7484255461783	3.70358676607592
Merged-chr2-165070531-5	12.4949924636157	-0.126029133924275	0.468894934526021	-0.268779047595536	0.788099717815006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86223710471505	4.72821082054724
Merged-chr9-7577560-3	4.70055111475951	0	1.39327738145711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45698270-3	6.07380207664961	0	1.37047663286299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48427832-2	4.37514479385613	0	1.36599430193906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45923141-6	29.3869288740389	1.08180035299718	0.334734326808651	3.23181779207123	0.00123005462830618	0.0423729654880202	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19244256319939	6.28643805244209
Merged-chr6-137414738-4	5.56401533398777	0	1.35115860521956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45221760-7	15.6213166537067	-0.635948476193216	0.376530692882865	-1.68896849105221	0.0912254683983278	0.858171555688366	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72731575978153	4.1141599938159
Merged-chr10-86731157-3	8.12457045422473	0	1.34981674336223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-78043444-4	4.53956127504352	0	1.37280238440793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3771636-4	5.94490413227777	0	1.36623913094619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75893710-1	5.57617898448527	-1.09057445328608	0.899931593389387	-1.21184150139533	0.225573058469932	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50217563705456	1.4771514048608
Merged-chr5-33008674-2	6.56753313605659	1.20920224482297	1.00583701334445	1.20218507450061	0.229291830732729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.4068548238317
Merged-chr18-60989270-1	2.0527125925042	0	1.50175589010615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152841293-1	2.78927173929769	0	1.44319474492227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131105792-2	4.42082517510864	0.438622311735928	1.32741036169007	0.330434599875709	0.741071601421877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.67591700901439
Merged-chrX-6352274-2	4.02881065393086	0	1.42609345476221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70009070-2	3.29431406344248	0	1.39614715418279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5833994-2	4.78311347145395	0	1.37037258929495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90216339-1	3.7684309656564	-0.398076823133245	0.860394762428617	-0.462667650381323	0.643602609482109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99059730437749	2.503755341024
Merged-chr5-23598140-1	2.90417434331557	0	1.46237555796786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3488462-1	1.83124509513806	0	1.47609792831955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133257109-1	1.92059244876197	-1.2763805818577	1.53722178862761	-0.830316478272935	0.406359873834999	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.465515277017237
Merged-chr3-82333723-1	3.57422524997955	0	1.37405857979783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13599758-1	1.71257104770669	-0.0346675432102523	1.56082259725848	-0.0222110720790079	0.982279585528359	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr7-89419127-1	2.04856949730046	0.615905879152484	1.45389042514185	0.423626064593135	0.671838543474103	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr18-56364449-2	2.99583727453461	0	1.39477981735087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108933976-1	2.0420276329948	0	1.53782689351021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37110695-2	2.49286700162656	0	1.49193532889836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-152067970-1	2.90146922847627	0	1.3922233947061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129317623-2	3.94853932183962	1.12324550233928	1.54636022760687	0.726380232940678	0.467605705719812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr19-56253548-1	2.77258688399417	0	1.43742027575524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131934756-2	4.48937938790065	0	1.38540933425942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81281408-1	3.15279319636704	0	1.39981059900551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110619692-1	2.18728907251936	0	1.40985146701519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80072511-1	3.6111478917846	0	1.39594328231135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5869013-1	3.18310601770617	0	1.45582657467913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3127910-1	2.60493821209732	0	1.43086982965841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32405184-1	3.04607368330102	1.20424960573865	1.52721583461068	0.788526139165937	0.430389015182761	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr5-91083228-1	1.49430835563261	0	1.7847278160561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-39820240-1	2.25796655774969	0	1.52217373093126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107275047-1	3.44449474454321	-0.0264469053105781	1.0368293697254	-0.0255074808669651	0.979650181560954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72807534006943	1.338064021838
Merged-chr6-134659528-6	16.944112032535	-0.210563844728518	0.452319714536063	-0.465519936367333	0.641559163417611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56333566324011	3.62353415811528
Merged-chr17-33897323-8	16.9387418150018	-0.123423663706777	0.37951716410983	-0.325212336565253	0.745020372504906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45744110522075	4.30673640102986
Merged-chr13-93179251-3	10.3506020669337	2.17339985634301	0.948075591504685	2.29243308847728	0.0218806645050203	0.341772994246369	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	2.37294415806896
Merged-chr4-148675227-5	10.4929404421487	1.47183240715674	0.650356145564935	2.2631175505818	0.0236284439372465	0.36140083961305	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56763655772049	3.60057796439121
Merged-chr17-10822753-3	4.66212633282288	0	1.37483870582092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87045622-3	5.92058275847663	0	1.41252828910274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106386530-7	18.6603443521788	1.10041445394709	0.523155367092166	2.10341807265302	0.0354292400045393	0.471992027922485	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30219722357347	3.74279213654888
Merged-chr5-92270669-5	17.4499005220495	-0.28988942097816	0.393770685476951	-0.736188425573209	0.461616035132693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02450807314785	4.83067566703704
Merged-chr5-103763161-2	4.40999562779725	0	1.37326173842912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140513605-4	5.66656692767934	0	1.3926890479905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-121331931-1	4.69560935783517	-1.75944406259027	1.03304075390303	-1.70317004042944	0.0885362515677551	0.842773156600742	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	0.723581231604105
Merged-chr18-55391781-2	5.02369134674915	0	1.38198549678166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76033983-2	3.74541196480642	0	1.39286302626173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41767612-2	3.90919080978908	0	1.39174211843028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83593047-2	3.67398524756879	-1.18923293602189	1.31291508862412	-0.905795771810465	0.3650439593997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.303163067301871
Merged-chr7-43397585-4	4.66389130863681	0	1.37159851276662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52458894-4	6.37587168783406	0	1.40033102956287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35222438-6	20.0144852886459	0.1619366365876	0.598146717810045	0.270730628064779	0.786598218420337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04378097693708	4.27445097481907
Merged-chr2-128367991-4	5.1365929494695	-2.23700780748751	1.25083992306994	-1.78840454819927	0.0737107630594933	0.756586153842261	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0
Merged-chr2-147023785-5	13.5622919507136	-0.707146378812063	0.522103256034091	-1.35441863393759	0.17560285600488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15824037053039	3.59447174928286
Merged-chr13-74301349-2	3.53368823650031	0	1.40261430229727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9317490-7	19.3327364508456	-0.10294238953202	0.360963920454041	-0.285187476361996	0.775500514561178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82322941724175	4.60891507816574
Merged-chr10-122799679-5	13.3502839357895	-1.04800627787671	0.679721849123073	-1.54181637566715	0.123118221539669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18592518492757	1.9134233865196
Merged-chr8-71528081-3	10.91405390832	-0.809891098503457	0.71555460321099	-1.13183689248751	0.257703014250074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15900386199781	1.83599083412323
Merged-chr8-83757073-6	14.7439256263959	-0.180846647354974	0.550589072135649	-0.328460291907898	0.742563662791922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5779073721314	2.47629065811305
Merged-chr2-16155378-3	4.94495876366499	0	1.40981593934559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9828819-3	3.03472683447215	0	1.53379440687392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-137141885-1	2.94759471779013	0	1.41184050620362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134234375-3	6.53590471669466	0	1.37793732118179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169921978-3	3.15787419157687	0	1.42789486272174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79417302-2	4.04088984524677	0	1.37722975895621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-5841577-4	10.47920586363	-1.40889685932915	0.574940461517651	-2.45050914595597	0.0142654338475987	0.258054814815847	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67004393940231	2.67651213481576
Merged-chr13-112674256-4	12.2676070186354	-0.284046246760846	0.521483153516282	-0.544689209700381	0.585967287303593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65874770470116	2.84616167536599
Merged-chr15-77542028-4	15.2363768128699	0.391955810840678	0.351727677347959	1.11437295408778	0.265119221144131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74412714240477	5.10245564149775
Merged-chr4-154946535-3	5.2813655570456	0	1.39279120394427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5002280-2	4.15461484342859	0	1.40401404992863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116894039-4	5.50022835681051	0	1.3725814263758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86823007-4	7.35276558626343	0	1.35557123863078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19716053-3	4.90852235295003	0	1.37263938893538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94965241-3	5.30858907046538	0	1.3872465637995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117853551-4	10.5267361961986	-0.104315884479058	0.552937977459062	-0.188657478291553	0.850361280443026	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35979880313945	2.73268022354721
Merged-chr10-88351893-4	5.16411942876251	0	1.35339128384628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126693364-6	22.6052627326427	-0.066048918473907	0.435545057260479	-0.151646580239817	0.87946569251906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08205217853582	4.12355758253678
Merged-chr13-37594598-1	4.92955956795431	3.01532956857687	1.10345818628741	2.73261787899908	0.00628331827673533	0.144359635758688	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	2.60030758339423
Merged-chr3-36060302-2	4.00953460133076	0	1.37678311507017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22012277-2	2.17869542663094	0	1.65545936402023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24053944-2	6.54823088683418	0.341906825362742	0.839461796606688	0.407292894977251	0.683792880537207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59864907237737	3.18048763128801
Merged-chr4-102290427-1	2.32737945491895	0	1.44410928555044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120243365-2	2.70098597399142	0	1.46400267587175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62244906-1	2.98834577142724	0	1.52365247702607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41674536-2	2.14524910054525	0	1.51270340799178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-59078094-2	2.29889226588789	0	1.46276178874548	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134132546-1	3.63082659792583	-0.679177465926181	1.51662496196212	-0.447821632216511	0.654281930086132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr18-53934449-1	4.80506458382397	0.0740066503471896	1.02302557835098	0.0723409579518838	0.942330570330634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66014775609343	1.45823418896805
Merged-chr3-127853495-2	5.49503296708887	2.9268009293603	1.16757561669468	2.50673351473874	0.0121852540141248	0.230954749983895	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.44025133671061
Merged-chr18-57800414-5	10.3440464558737	1.19903486034364	0.733220448091265	1.63529926567787	0.101986327443707	0.922902409441065	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99170652413272	2.96465335238998
Merged-chr11-93861447-6	11.4142728512462	-1.39187715830351	0.70819826794153	-1.96537780634395	0.0493705262428821	0.584691162535256	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56075806381015	1.9387358207003
Merged-chr13-45889155-1	2.59876902813196	0	1.41001226830697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34539628-2	3.15851049522861	0	1.41749884962676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-11352976-2	4.69270888718142	0	1.44536155330165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130820002-2	2.2948924064836	0	1.42916448367908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98945203-2	10.6069068893173	-0.102837501551251	0.725004870231158	-0.141843876881079	0.887203325691959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4885037243069	2.11766991121861
Merged-chr2-49734606-4	6.05574277680321	0	1.36382687506994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163758368-3	9.42570074758676	0.0616927913912938	0.742814670801745	0.0830527368619505	0.933809606467108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7852714664239	2.14941799930046
Merged-chr17-43550188-4	5.47516297000823	0	1.36240980334716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161512337-6	12.464727246921	0.204335471692554	0.613000934799967	0.333336313360162	0.738880431140358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28055475498378	2.9393571007453
Merged-chr7-24890644-3	4.84388905560146	0	1.37827714908984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13336079-3	7.29997597196819	0	1.3571376899898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30646854-2	6.51943917719477	-0.0359370168859493	1.14627732376466	-0.0313510667452821	0.974989565028184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr4-141425882-3	3.99336426518765	0	1.38095653751577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27291598-3	6.564612555636	0	1.39333788456064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63824236-1	2.5574251199086	0	1.39966460147596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80346402-1	2.05168032619687	0	1.44323998118316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121281065-4	7.65630939195587	0	1.35770503323958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154943288-5	18.1119459478001	-1.04152066075772	0.421560606336813	-2.47063090123174	0.0134874946623013	0.248026631376196	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76656998989929	3.52530190354284
Merged-chr6-116108159-3	5.19820423662146	0	1.38898485371072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136630264-3	9.51071383369176	1.15309141052413	0.792773350303648	1.45450324494696	0.145806834482626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0991499147123	3.0333861695361
Merged-chr13-80960026-2	4.06337222153855	0	1.38036721627916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62466513-4	3.9515462807737	0	1.50263305906768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100868732-1	2.68889838850205	0	1.41898762616167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32379711-6	11.6936102860517	0.853640124952598	0.71585868376644	1.19247016808014	0.233076941254429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26428495695095	2.19255448215958
Merged-chr11-106796871-4	5.18295041804283	0	1.39211394100748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86723303-1	4.44332042941497	2.12050330286782	0.925177802090786	2.29199543922881	0.0219059063555564	0.3419825283118	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	3.10712767407178
Merged-chr8-77535207-2	4.52044005619159	0	1.3685537277477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115269811-3	4.31912428873526	0	1.3948210444812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45457552-3	6.48757844881477	-0.0981159644478586	0.989173509491765	-0.0991898423344054	0.920987539728909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47971361857133	1.13341594473881
Merged-chr9-57723387-3	4.43397825996138	0	1.38192822616021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34588399-3	7.45554086800833	0	1.36262148564292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64081476-3	3.78087783562264	0	1.38181944157974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22090531-2	3.82818367466964	0	1.38343872410444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90013469-2	3.56194448858762	0	1.42593621258345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121370958-2	4.49180505788255	0	1.40138635566152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133449874-4	15.4417931258523	-1.65164672715118	0.492286328000111	-3.35505301124433	0.000793497771251984	0.0300583591271684	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94011714581195	3.45700499096724
Merged-chr7-128320628-4	5.32181121243185	0	1.38963388994605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134578158-2	3.89889488367565	-1.64589290717863	1.17410903389943	-1.40182287986689	0.160968144351136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75485430327507	0.55634759613363
Merged-chr2-148500619-4	8.90991034456189	0	1.36372545379923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73000051-6	10.3740387176494	-0.428903171932407	0.673305987904734	-0.637010779106709	0.524117822424191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75399729942732	2.46052538094855
Merged-chr4-105275358-4	5.54792859553117	0	1.40260627976425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22841647-1	2.75044213967361	0	1.43462175750408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63133992-1	1.88424959651726	0	1.53744094710753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126551959-1	1.84971505167409	0	1.51462197019157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139570945-2	5.78559572642468	-0.115647318465498	0.858560462898615	-0.13469909629318	0.89284978773221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34327250745675	2.50736436935109
Merged-chr6-113039801-1	1.66330277562668	0	1.54260393418318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91032557-1	2.576167313262	0	1.45881149726155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78374857-1	1.71745459045591	0	1.63401468831924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-13756584-1	2.88924603003982	0	1.44390625314047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39520255-1	1.82577107980429	0	1.56641767924651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118362639-2	4.16627304770899	0	1.40741699108154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97764699-2	3.79229203334233	0	1.42881615814607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78523811-1	1.79356181390995	0.608523882621101	1.52347439245634	0.399431644952012	0.689575180731494	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr4-12538762-1	1.87091113439241	0	1.52077934049724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87634417-4	4.69678503834194	0	1.3922783769513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29894027-2	3.99712325638001	0	1.42169691910151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28050165-2	3.74902756726366	0	1.39519016896074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149624017-2	2.54340971767102	0	1.44422056999512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-26859474-1	1.04809810020944	0	1.74598965215741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96941387-3	3.56077102299445	0	1.40215322150523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95046091-1	2.67954380531284	0	1.57841544851414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100393195-1	3.15009172215792	-1.78145870023078	1.48828574952306	-1.19698700387454	0.231311620301647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	0.376242425970964
Merged-chr6-127237414-1	2.73107142443715	0	1.45903767128801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83198142-2	2.89807360822753	0	1.41319027910756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-33115024-1	3.06123347915635	-2.39283004771702	1.23517172797753	-1.93724483285821	0.0527154223001165	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35831708478863	0.577068348605183
Merged-chr5-99216413-1	4.09878134807131	0	1.41415683328684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125127995-1	5.35214465339754	0.651571770591338	0.99089740557177	0.657557247528937	0.510822673800894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.83076147239238
Merged-chr2-153144451-1	1.70604493373192	0	1.51436065111631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9463492-1	4.13247687326128	-1.47040628402351	0.896601232448534	-1.63997798665519	0.101009744093705	0.916333335048802	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55963722005284	2.00101204725338
Merged-chr7-88344121-1	3.69689505942194	1.54814186673944	1.08510900493731	1.42671552783665	0.153661908017641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.62438888480879
Merged-chr5-67256656-1	2.2912814272519	-0.121844490885417	1.32557360219643	-0.0919183142177281	0.92676294041994	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47126464988938	1.47751579018518
Merged-chr9-55117484-2	2.48608751075419	0	1.52085753948968	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45664183-1	2.78422598861006	-1.18510875279443	1.27926140399494	-0.926400772425025	0.354237742841211	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	0.723581231604105
Merged-chr5-65096236-2	4.65835511584284	0	1.40116891601205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23976386-2	2.74658588168049	0	1.45228252634754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115497104-1	4.79422678408082	0.0129646876767497	0.661173890611628	0.0196085899047776	0.984355611398508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0861950770416	2.47698936500491
Merged-chr9-63132267-1	2.66430954338976	0	1.42800768257612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131218473-1	3.52544641071781	0	1.3942243319149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41371032-6	14.9917214274282	0.508685731854356	0.560153226464457	0.908118900010716	0.363815405922511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20213796229157	3.01966504370777
Merged-chr17-71254892-6	19.7839789867531	0.194081484361091	0.432444880806184	0.448800513025555	0.653575568622939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40930250883804	4.52644793071602
Merged-chr1-53791928-4	7.05785880749486	0	1.35658703079791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18423735-5	12.7611778306685	-0.310563626604681	0.595440721415829	-0.521569344243416	0.601970212290236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95646512821198	2.41387450741157
Merged-chr2-173546513-5	15.5322792502149	0.765222237323783	0.468695497604754	1.63266393902739	0.10253969564854	0.926675862969079	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07293432132396	3.97391454582263
Merged-chr3-148961080-7	16.7895862606967	0.463396599144498	0.457653812975109	1.01254831928976	0.31127595583245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78908037547275	4.16637439354821
Merged-chr4-154968213-5	13.6981813303048	0.490035607633549	0.607507812896882	0.806632601639853	0.419878185036502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21829401668196	4.95442684359799
Merged-chr5-101909721-3	6.77536045674332	0	1.40253686903113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118468284-3	7.04573185787996	2.79359731033933	0.807840267421512	3.45810604274038	0.000543987220604343	0.0228874623257209	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	3.67702550025898
Merged-chr9-63933235-3	4.25511481525741	0	1.38068383209658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70005314-5	12.1599809847689	-0.0483940703236769	0.589061981533465	-0.0821544622480914	0.934523884839936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29348392689366	4.24418519310707
Merged-chr7-114291690-3	14.1447006232056	0.170713937478131	0.569380250799292	0.299824128494945	0.764311309658682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63957126940493	3.70074217897925
Merged-chr17-69265446-3	5.92347078111218	0	1.36602238790226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111912531-3	6.97259835521734	0	1.36377753305785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136721961-4	18.3184990648153	-0.203146734014373	0.453202610824812	-0.448247051455977	0.653974909013998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73368358034169	4.47947336903509
Merged-chr3-85604577-2	4.62889826099943	0	1.37751875688809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23431131-4	6.78713531359767	0	1.36937810309198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99791024-1	4.76961412485089	0	1.47030229829058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10025462-2	10.3835375552187	0.797436849878275	0.92673986370131	0.860475394565837	0.389527041241461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	1.89825839263227
Merged-chr8-23028228-9	28.0262136292593	2.49440898236252	0.551316098965781	4.52446244004447	6.05492042572489e-06	0.000582547644994654	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	4.63631323910432
Merged-chr17-87286265-2	4.52070383502429	0	1.37354162316086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102666949-3	4.76187395157815	0	1.37726892113043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61017784-6	18.2299219147474	0.265764397877669	0.427844687336809	0.621170265153843	0.534487601520154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35480191521101	4.3641346094585
Merged-chr18-30365820-4	5.19618009942746	0	1.3731568391676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31071014-5	13.4122358435294	-1.03279542238252	0.499596560783373	-2.0672588713643	0.038709767501901	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86434701035327	2.94206341122943
Merged-chr8-66400224-4	5.07858758840293	0	1.36530594603217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120098590-4	5.32479897419997	2.62030946020784	1.1659800870299	2.24730206746717	0.024620728845978	0.370188175698424	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.10718024078827
Merged-chr7-19253878-2	3.90503379159924	0	1.39321965981978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117307230-2	4.29879037633525	0	1.38324000597626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172464372-2	5.56505453708426	0.937195000770589	1.12167292225203	0.835533230925234	0.403417544658948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.39949824061849
Merged-chr6-129501160-4	11.0918286934059	-3.69759997447693	0.828321814713118	-4.46396546462749	8.04565381341957e-06	0.00074002317367796	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56762242609698	0.990919527803163
Merged-chr11-115178027-6	15.0877162609015	-2.04320510797243	0.586542788310132	-3.48347153642284	0.000494955749441625	0.0212906675194068	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83939051598093	1.79394971953285
Merged-chr10-68137664-5	9.4256220284369	-1.76154821469506	1.26515993655848	-1.39235219500143	0.163815773114391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr2-35475068-4	7.10238422718627	0	1.38197645777654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85933402-4	5.38618278672597	0	1.37897203960128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135282916-3	5.0846285285064	0	1.39356928759471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131196722-4	5.3467725902408	0	1.36032936247218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52888332-1	4.45756234442197	-0.205980287437992	1.12498815535945	-0.18309551656762	0.854723073571643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31205403547308	1.73795749839718
Merged-chr2-68886283-2	2.98080136856203	0	1.43335697080251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64243365-3	3.80375754623146	0	1.41922986138559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80175560-3	5.36771404252341	-1.38850942330871	1.00098304032831	-1.38714580304307	0.165397307732036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	0.859510663435501
Merged-chr3-58511802-1	2.56592605562893	1.84455890134572	1.39649661503402	1.32084738443909	0.186552256488394	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr10-8866369-1	3.55727299067414	0	1.39902531646806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101812716-1	3.56069451244508	0	1.37540092058176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-121824808-2	7.63287686270304	-0.443851207888309	0.804460209702976	-0.551737926294935	0.581127921411091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58877250519002	1.50481947192803
Merged-chr13-5779029-2	4.26045030840768	0	1.37082633775832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34052254-2	3.58892213295438	1.6368939489884	1.37905282093427	1.18696972598878	0.235239562150865	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr1-23189519-1	2.4818994738957	0	1.43762306335535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41284911-2	4.24796466258572	0	1.44594392958611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88252270-2	7.85792184751647	0	1.35463141267344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90800740-1	2.12033195037965	0	1.46359769205633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169089125-1	1.9367563832793	0	1.48474446941434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93793361-1	2.66438832969441	0	1.41644322477039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-145119632-3	5.08567728678099	0	1.37946889030487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-170005297-1	3.55132771224156	0	1.40607139910757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135073823-2	4.52385094050801	-2.06078588838304	1.00017748819225	-2.06042018812858	0.0393583885722514	0.501745985259006	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60016286176753	1.02674429890598
Merged-chr7-83568765-3	6.09667102694532	0	1.39336423749779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19377349-3	6.65518109463663	-0.206012258673623	0.956310483322467	-0.215424030444468	0.829436736211617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.14143228603163
Merged-chr5-43883826-4	10.4739588433815	0.660972452733243	0.593697682267007	1.11331486120908	0.265573226015965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71797405654368	3.91382181620303
Merged-chr3-97661414-3	4.6650679963317	0	1.40047466379246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-20961474-3	4.37781878799878	0	1.41988877633946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6011829-2	3.94396329390949	0	1.36131945050109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114885389-2	6.3273230422772	0	1.38182704590791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-93984768-5	16.8800570904604	1.5544991106234	0.440743972466006	3.52698892721283	0.000420314340727379	0.0189720206276086	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19467172030591	5.13133185458269
Merged-chr17-63873646-4	5.9673040019007	0	1.37398745489974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55513038-5	12.8518480216507	0.87023513377485	0.543041652125952	1.60252004679193	0.109040658157107	0.960677231887325	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65649780813402	4.10627088440725
Merged-chr8-46765219-8	18.9856725786596	0	1.34712991469826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105922788-1	4.99917776843941	0.424949027806435	0.953699662325353	0.445579509559965	0.655901014497602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.71450075940727
Merged-chr10-128913445-4	4.95625062688473	0	1.35963547775538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-5268057-3	7.09019728605168	0	1.37172575538576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85787351-1	2.16113223866805	0	1.56924006498036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83682847-4	15.0987821860443	1.76363736468	0.619030420281517	2.84903181959612	0.00438524944139459	0.11201963081991	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86684104340128	4.45400964683886
Merged-chr16-44772740-4	4.7882331857282	0	1.39340333592003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109062033-2	4.15357250183933	0	1.39775908358099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-52712511-2	3.40804369414712	0	1.40087120149377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107114097-1	2.96407220281742	0	1.38850184170168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162366471-1	5.25118075008208	0.392151819051701	0.886270748650435	0.442474062975506	0.658146195098648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02938698498506	1.63227011204743
Merged-chr16-76380353-4	5.50853828059173	0	1.37114146926511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65674698-2	5.20363471278876	-2.79563504700392	1.06801073239742	-2.61760950728314	0.00885480712726914	0.185059000627152	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95988517553914	0.716426531808663
Merged-chr15-98994095-3	4.53945329370143	0	1.43266347322244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145096976-2	5.6458608539976	0	1.39374634835234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116195446-4	8.39753442402911	0	1.35170237234524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31376131-3	5.22089957140087	0	1.36427302668132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4446051-5	7.40662533031107	0	1.38565152424232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37430088-2	4.6453014533848	0	1.37548230573288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-31034124-3	7.1036209178553	3.39082539710357	1.16008491413013	2.92291137985025	0.00346775198456554	0.0950118599440514	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.06621232759638
Merged-chr1-156581454-3	10.8721641441486	1.2698056708327	0.621241597606549	2.04398043486602	0.0409554800261026	0.515466297462124	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91297957653829	3.69248170980213
Merged-chr10-78600106-3	3.9952276956246	0	1.44359744564511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3829966-2	3.23826245467014	0	1.37900873284586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94069656-1	1.3501369408665	0	1.5234943751132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50904066-3	5.60715958488004	0.702293530639764	0.967830242102433	0.725637100483821	0.468061270828878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.65422789556272
Merged-chr7-122949427-1	1.30569182358382	0	1.92570722056769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113772143-1	1.83959233158146	0	1.61590833388609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122861023-1	2.39563328684116	3.57663131058975	1.33257003394038	2.68401001035099	0.00727449281204147	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.1893145161846
Merged-chr8-11335407-3	3.42077572151573	0	1.41878838093149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34692544-1	3.08313651784306	-1.63225265575091	1.14053070897098	-1.43113433326453	0.152391719078019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36453465698696	1.18984215491549
Merged-chr7-89441299-1	3.77735932019722	0	1.41444075411865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46143313-1	1.72054647554769	0	1.52314519656579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77191265-2	8.76341848365488	2.29216118681579	0.695950777835961	3.29356796459542	0.000989244224071218	0.0356121369379386	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94036587464633	4.41627732564186
Merged-chr2-117801468-2	7.45228259971819	1.29497426746415	0.767307097823207	1.68768706967249	0.0914713152089009	0.859662728810624	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98002631528474	3.25845206145169
Merged-chr16-84327451-1	3.52595514130746	1.67281626034175	1.20300178304161	1.39053514626743	0.164366434415177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16286647593625	3.3333987667898
Merged-chr2-167222353-2	5.4856831952933	0	1.3632989857673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74016977-1	1.68379106245329	0	1.60530622009387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102415433-2	9.79825177739915	-1.62401239497638	0.713228290928877	-2.27698818965992	0.0227869308951433	0.352396806978405	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09488509733717	1.73617258608874
Merged-chr1-191445626-3	5.0197062952994	3.10563675789002	1.14029094437211	2.72354768159639	0.00645848920147243	0.147449397103251	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.74128181593619
Merged-chr1-138127325-1	2.98506851220045	0	1.41522807229966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128698391-1	2.44317883581385	0	1.41457425144111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-14115436-1	1.22449805096778	0	1.68527596869234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22519925-1	2.37194493343086	0	1.45907878344043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87027423-1	4.98011320822821	-1.41143681638568	0.931980979936557	-1.51444809150693	0.129912229789582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81733431498626	1.40024388691264
Merged-chr12-41313602-4	6.43924946625383	0	1.3673811802126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83908868-1	2.86798712418562	0.217943469958326	1.28651499639485	0.169406085874677	0.865477236856816	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.18909650862134
Merged-chr14-66242472-1	4.21943864734294	0	1.38267756222478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21522840-1	3.97940494556573	-0.583909014921518	1.05452420273749	-0.553717983338571	0.579771865946063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39577521289854	1.97596182099452
Merged-chr7-64011421-2	2.67598564599016	0	1.43409133674271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124767330-1	5.26387887034686	-0.503729398391398	0.888590378573938	-0.566885947155778	0.570791672349488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16637160312171	2.41031217304274
Merged-chr12-55484256-1	4.85385894725525	0	1.49558361284948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111172935-1	3.28489071869786	0	1.42434556738213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35951265-1	2.88150820134975	0	1.415203610731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73451531-1	2.30970100773976	0	1.48933512058868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149355956-1	2.07037484072282	0	1.59532765771007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31857852-1	3.06606638402522	0	1.43957199162863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96488198-1	1.46764163326764	0	1.7309476885439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23401812-3	5.67626641778941	0	1.36991228876253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27989936-2	3.8964461752372	0	1.37629403005449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7581291-2	3.83585697429283	0	1.36331228746464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39610487-1	3.70110552135161	-1.00175408182455	0.994785026553114	-1.00700558923327	0.313932088268091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	1.08976818821237
Merged-chr16-70387645-2	5.16980028397395	-0.655997484011304	0.775607779099157	-0.845785075509716	0.397672652695062	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83669714167523	2.00484654695269
Merged-chr5-9107997-2	3.03305694097969	0	1.49326617207788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-18794624-3	5.94257723488761	0	1.35151935160462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102422790-3	5.82741280032162	-0.336351368527236	1.07716889715983	-0.31225499493542	0.754846740030382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.02186287315087
Merged-chr6-129491479-2	8.59454912721957	-0.00301767718792342	0.546037797589422	-0.00552649871720506	0.995590514444146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00022774159124	4.00257797988363
Merged-chr14-121931613-1	5.91627049564155	0.727896668451824	1.05289441659344	0.691329213053362	0.489358677474319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38343055397873	2.95948784282561
Merged-chr13-111771406-4	12.5300729616896	0.287865231336345	0.555162307074167	0.518524452521751	0.604092403869258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80283898749574	4.14436400338176
Merged-chr3-90472398-3	5.63097892469231	0	1.37561856918555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55813010-3	5.15085765151546	0	1.40096351945987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121215713-4	9.049157075131	0.0376625653629258	0.624756671861524	0.0602835744846174	0.951929783814216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32390248490471	4.07282686596963
Merged-chr2-129403196-3	9.52525755698688	-0.340961037086839	0.711118103070585	-0.479471744024768	0.631603065006338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89292226578911	3.05072711334616
Merged-chr10-116572159-4	6.61760964105392	0	1.36634529748197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121340530-3	7.24648801793344	-2.20677345068834	0.984980995844836	-2.24042236347469	0.0250635157784254	0.375221055962387	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33920846102772	0.67591700901439
Merged-chr1-125519292-2	6.16743403489279	0	1.35251745705838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95949427-3	9.89093774637719	-0.644984525479927	0.616514691411517	-1.04617867905666	0.295478544754464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62203080589585	3.22885111598229
Merged-chr19-34284632-6	18.8319290671738	1.14604167691717	0.452973162756841	2.53004321479499	0.0114048478772097	0.219764667053258	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21307634533781	5.19641917424847
Merged-chr2-35135698-2	4.8187071428767	0	1.38772444099814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62232768-7	22.3369073012058	0.567619918150923	0.41196957298433	1.37782000267411	0.168258868655764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25478020201639	4.88065055866204
Merged-chr13-45904819-2	3.51759850727533	0	1.40741122752922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37954484-2	4.78293370202535	0	1.38549006022144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23782515-2	6.38899783642666	-2.7963255115444	1.20846275416812	-2.31395258306436	0.0206703232673817	0.327585452621458	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0
Merged-chr3-94997115-4	5.35168093675416	0	1.36531965460847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78138448-3	4.23511580310079	0	1.36646103958927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111219830-2	7.68617058630722	-0.146090145829725	0.584547406574717	-0.249920099185406	0.802649139446247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85698782037262	3.11562420912354
Merged-chr9-37421399-1	2.19083955559076	0	1.41760346372873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74880228-3	4.28385894831638	0	1.39016001076088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145198431-6	16.2970878386993	1.23623678727761	0.716298451735779	1.72586829453824	0.0843711098331927	0.819279949878978	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69181239031707	2.95031018941741
Merged-chr10-70261212-3	3.06471031971937	0	1.42050337071078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9424080-3	4.1331625078796	0	1.46214355625427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24021893-1	6.0588944732713	0.128318673706093	0.777799872131965	0.164976465416958	0.868962506090556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40782748329714	3.18644001735659
Merged-chr10-37979160-2	5.71316501170997	0	1.37245988439081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47215696-6	15.5324377053996	-0.163109816580336	0.542852754584318	-0.300467880475682	0.763820292856035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45925595033179	3.43625543678016
Merged-chr17-47261169-3	6.59664927844671	-0.270854652110952	0.873145145204967	-0.310205758571068	0.756404491684309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	1.63990324542946
Merged-chr2-102764966-6	17.5636603643408	0.725160697729028	0.885529609306849	0.818900565387813	0.412843147329128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.30430658010148
Merged-chr1-80635829-4	7.85574858266537	0	1.35382329219139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38846593-6	12.0429765294481	-0.101489812727447	0.507844676997794	-0.199844199071694	0.841602432649206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2428258157732	4.22504804514245
Merged-chr8-90881045-5	10.8574864593811	-0.351322486984536	0.570828633943356	-0.615460518435377	0.538250635387201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38845792821851	3.3243278597821
Merged-chr8-83217627-2	6.47078808186567	1.0743056256493	1.00312995232873	1.07095359196018	0.284190296994079	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.338064021838
Merged-chr7-101821776-2	3.93122976878285	0	1.37274322214929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118424772-3	6.932120165638	0	1.38036861227792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29248597-3	7.19120073978055	0	1.41548341996563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9829248-6	11.6562275947839	-0.0847279884686597	0.49824918891554	-0.170051432804283	0.864969688113534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58483167389273	3.44502315971625
Merged-chr12-73537923-4	5.30310291223731	0	1.36833415373389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24173590-5	9.12374543964054	0.450067349516987	0.635290033299274	0.708443901094491	0.47866963798975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72525188647403	3.04713864511939
Merged-chr13-42331313-3	4.61102657282147	0	1.36816076779595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99180034-1	8.14194298928346	0.732928861494501	0.675230406562873	1.08545002471872	0.277722386501732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52754339325281	3.45549998893006
Merged-chr19-46698350-4	7.8922080000446	0	1.35796229020437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122152295-2	6.04376534791494	0.229340390507007	0.932602183535497	0.245914490182274	0.80574842666951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.338064021838
Merged-chr2-46442169-3	5.57573787812498	0	1.36632751921703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102299456-2	3.08602990807032	0	1.42291611703013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79059780-2	7.60641661217903	2.06375182940107	1.25635234325073	1.64265370338805	0.100454602690376	0.913909915924041	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.03321995648104
Merged-chr19-29571284-2	2.75019629244992	0	1.43560940860589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105650525-1	5.97201800160865	-0.114216329368789	0.661828472210037	-0.172576935210097	0.862983982884582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54778655475487	3.49752035795385
Merged-chr12-12274535-2	3.90289078243685	0	1.44040481091193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99330235-1	3.10967281948854	0	1.41452411440664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113352755-1	3.17379322051151	0	1.38572813025002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83743697-2	1.84930430568095	0	1.55859683990156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24149556-2	2.68623691658132	0	1.50358168516774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8717198-2	2.65123386156123	0	1.6769959981342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-30936283-2	6.48664571621301	1.47039418893711	0.776814890790877	1.89285015821479	0.0583777990643532	0.655246495837121	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45639377467255	4.41493629808943
Merged-chr9-50958237-2	2.24632483160157	0	1.65228363434222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25121716-2	3.31796835101557	0	1.51495972290801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35462361-2	9.22238975227521	-1.21975159831745	0.616170077359003	-1.97956967262267	0.0477519035756792	0.571901329307663	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42984543443555	3.11035431769386
Merged-chr10-98754469-1	2.36338132101474	0	1.38897262760217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100664110-5	10.0780957682193	-0.208736282331876	0.679948668762282	-0.306988294736779	0.758852281777619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89417081547303	2.37132011681132
Merged-chr10-13201048-6	11.9736429953357	-1.46910284134778	0.662837176944324	-2.21638570141816	0.0266650981084534	0.392815194600926	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28046562910414	2.15576282990258
Merged-chr8-121927538-6	15.7578075703696	-0.23564984019587	0.404502246561785	-0.582567444801263	0.560184526385671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10395472324288	4.02805400530905
Merged-chr10-57001550-4	6.2170059260544	0	1.35222253555957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103419280-7	27.6346330005114	0.425057180258226	0.368533133997715	1.15337575117699	0.248756190020522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47887680448886	5.12214961515753
Merged-chrX-157617348-1	5.38296691366307	-4.70649986387137	1.06814923883988	-4.40621936779461	1.05190435785353e-05	0.000919300144510612	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48910686631238	0
Merged-chr15-59760311-3	6.04145410516245	0	1.35180706703002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46479490-4	5.80283653762703	0	1.36167262467083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46589367-5	13.1105772012122	1.08134256708074	0.459089556535058	2.3554065904746	0.0185024482214606	0.304331971871439	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31160775607576	4.57056799857584
Merged-chr2-33047061-4	5.9365431880766	0	1.37218084176766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59976575-3	7.78800405366627	0	1.35935587926923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148114943-4	5.44856033985563	0	1.36969798459963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33568753-2	4.90457157351181	0	1.40984504971222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24481774-5	9.36198797918354	-0.224848052628608	0.60994534764433	-0.368636392583358	0.71239876573819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86504561970254	2.16316624203518
Merged-chr14-56689396-1	3.9735011416096	0	1.38523237549056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45703480-3	9.08336494602158	1.27177098340055	0.668633569857171	1.90204476821619	0.0571653021340856	0.646576916085468	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83161737716784	4.0227650754513
Merged-chr10-121509629-1	5.41908315501722	-1.27734745269379	0.763563262575136	-1.67287704280835	0.0943515040408453	0.877627208787869	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96592492512468	2.02930922537333
Merged-chr4_JH584295_random-1859-1	1.6533596000562	0	2.19559176329057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10411234-3	8.32742518057178	1.14790642205849	0.75759689627656	1.51519419852461	0.129723231838922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	2.6406562037129
Merged-chr18-75902296-3	11.2532717974716	1.90126599183796	0.65164410035346	2.91764475548338	0.00352685903713406	0.0960852954152258	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90439599219281	4.56163516142837
Merged-chr17-81705392-2	3.99563845923206	0	1.40028863968155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35214942-3	5.2005046167654	0	1.36112388784336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171183606-6	16.4161370167259	1.03390950378028	0.414341690840615	2.4953064744286	0.0125848382173895	0.236794468902414	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75385742160321	4.72197273123091
Merged-chr17-78688163-4	14.1013132259593	0.509724219829147	0.529162780350821	0.963265442613355	0.335414330828401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65177463970556	4.28168219358411
Merged-chr2-166732386-4	4.95300762164828	0	1.36016590417303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-51470980-2	3.14568310424331	0	1.43170574614943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-152214273-2	3.55863094986147	0	1.38722739975676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172612497-2	5.52017848485272	1.47218527713667	1.15678083943985	1.27265703834579	0.203139768887229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.51301315377886
Merged-chr12-52283796-2	3.30450340649727	0	1.40884152364448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93485499-6	13.1809538184223	0.315184399851705	0.493691905870421	0.6384232678395	0.523198188591178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4094069118418	4.20329141130884
Merged-chr13-110616485-3	6.45190540687583	1.34136489158918	1.01455359574438	1.32212324436642	0.186127114729797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.00105898665567
Merged-chr10-77917118-3	4.75586478079575	0	1.36082324060956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53180688-2	4.27410638813369	0	1.39162559889599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91090424-4	8.66634322415183	-1.2032527864317	0.704721426823506	-1.70741620821052	0.0877447198769817	0.83893792473667	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04144112810011	1.74224738577465
Merged-chr5-117396611-2	6.27251005496661	-0.26887434794134	0.672748793502046	-0.399665299348503	0.689403053789373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68333779073552	2.11518404902724
Merged-chr17-29922337-1	5.53844446277088	2.11788087010242	0.878194466823776	2.41163085183434	0.0158813519416193	0.276342640907326	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	3.39720244997942
Merged-chr17-31002775-2	4.25256913451246	0	1.36121599513218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80801519-2	3.74258211750823	0	1.39884935543835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44316637-6	12.7726744559237	-0.698550388643229	0.495557371226183	-1.40962566436005	0.158650244787447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84981514344496	3.0556994960216
Merged-chr10-118081307-7	26.8566573247667	0.272132677672669	0.561632015456949	0.484539111345459	0.628003314186165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93883980555255	5.52727064753563
Merged-chr17-84128488-3	7.15643317484574	0	1.36098781874105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100465763-2	8.51042179121825	3.30929558647605	1.11688311537341	2.9629739593383	0.0030468234375055	0.0860822636379219	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.09243520768647
Merged-chr2-166654235-4	5.8713684708557	0	1.36344036283063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64341227-5	9.18782000069817	1.47477582261201	0.859702011603968	1.71545000791667	0.0862627535607018	0.829395559909843	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	2.16696648475163
Merged-chr10-94829575-4	4.8515327374344	0	1.36511800087038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-111687840-3	5.77209943080182	0	1.39163587858355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63282724-1	4.39206663604818	-2.07592272136678	1.26143489023459	-1.64568360795912	0.0998289155827646	0.910467412707068	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09984832661085	1.38572824442771
Merged-chr16-34738878-1	1.79823628245902	0	1.55365849836047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39309501-3	7.13598195067438	-1.20039793560937	0.692753652606224	-1.73279192551829	0.0831326585316677	0.813356404809742	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41861345969732	1.55809314683451
Merged-chr11-18927568-1	2.16630145070961	0	1.46551710183518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159672687-1	1.64167580229882	0	1.49898657747632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25525579-2	3.34451091536647	0	1.39435916856703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20163757-2	3.37347368071826	0	1.42991269692425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-15853293-3	10.3243600613918	0	1.40133191678609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45393231-1	3.87044040505115	0.156946766883599	1.01412763664938	0.154760368627899	0.877010235956099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.38647389072186
Merged-chr8-27058014-1	1.69439064595625	0	1.58648219527121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12139379-1	1.32091638701506	0	1.56426196186366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-68695950-1	4.186088883077	0	1.38954898029845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13497340-3	5.27109152347099	0	1.39338834440171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143642356-2	3.23103096700673	0	2.01659811142589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70818044-2	5.18101096777186	0	1.36825954405719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-77559018-1	2.84937593313283	0.336700392787481	1.17791377437953	0.285844685842848	0.774997081011456	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.38647389072186
Merged-chr3-78314548-2	3.58052929133602	0	1.4384284952868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29806477-1	4.39122644686187	-0.278033316491677	1.01629820275702	-0.273574543118768	0.784411599533766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34106889333198	1.69393793853868
Merged-chr6-97406523-1	1.74325703247856	0	1.49356505516731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110727865-1	1.36338463347824	0	1.55769801037284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70963692-5	9.83362065467619	0.410046926449426	1.10548239409466	0.370921263549597	0.710696177099438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.02674429890598
Merged-chr3-89941787-1	2.19774317636328	0	1.537337719129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-56677363-1	1.17529369533139	0	1.56419259188733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37249670-2	3.33060159419466	0	1.39679876343318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-121612172-1	2.66186613802715	-1.5294141385401	1.35268717600355	-1.13064880459552	0.258202937183281	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04181016172925	0.67591700901439
Merged-chr9-90263082-1	3.85225837311217	0	1.38773309527639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-43469314-2	2.55444199491074	0	1.46191075572989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167959650-1	3.23433148389635	0	1.41023014216556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51178517-8	30.0874890951837	-0.20211617171997	0.393556079198539	-0.513563841096221	0.607556965526414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47112420484091	4.30702894527216
Merged-chr14-65343384-5	18.5995324079039	-0.481244845450853	0.509504056768476	-0.944535846295599	0.344895892864672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90460162536971	4.1423405531782
Merged-chr10-13295240-4	7.76206514794282	0	1.36466323740611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13716506-3	4.63305607377986	0	1.36315049228995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37964728-5	14.937364689164	-0.493136321388865	0.548403208359426	-0.899222166960156	0.368534335372368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79663408657972	3.03763517116179
Merged-chr12-32767050-3	4.93392494379422	0	1.36947843364112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133160435-5	15.2797939934711	-0.32291743562101	0.511897813111991	-0.630824018680391	0.528155596839136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64075967417402	4.0696726933578
Merged-chr8-125113479-6	19.3478021315093	-0.298825572674256	0.435234361101091	-0.686585433921768	0.492344010064615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29471593985209	3.97342321840942
Merged-chr15-9572088-4	6.17678220126333	0	1.39181357344697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95048856-2	5.55400493879956	0	1.35958001784338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96314303-3	8.9982996865098	0	1.39579061930171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21168113-2	5.00645208731857	1.4745125188704	1.01869157334462	1.44745726523407	0.147768897116625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	1.97731223551783
Merged-chr4-12460374-2	4.36580526554502	0	1.41819921728656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12810587-3	4.78993652755007	0	1.39673428919417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-130430112-3	5.10294165052017	0	1.38294662585795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-40135157-6	16.0025850808525	-0.39475421943192	0.455255534309869	-0.867104713027455	0.385884638503454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44153239212719	4.17963837199964
Merged-chr8-35705703-2	6.16359649676224	1.64935059050203	0.808910399203555	2.03897810205675	0.0414522130928317	0.520513017212576	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03280651306513	3.33738869597124
Merged-chr11-32537366-3	12.0423929052196	-0.862381353417787	0.589455005418918	-1.46301472629773	0.143463349424834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59296178371372	3.25998505278663
Merged-chr3-16086735-3	4.4207892827463	0	1.38185516256299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67984791-7	16.2071801231577	-0.0489220753017337	0.379609529577686	-0.128874729135908	0.897456773120314	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50073464420834	4.18416566559451
Merged-chr11-29796748-4	10.6190476184672	-1.81117273508364	0.602806364543778	-3.00456803646125	0.00265958268692087	0.0773527315560896	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7901306428307	3.10829613751528
Merged-chr5-72861931-2	4.62580300275809	0	1.36981886945079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21202043-2	3.85213626434533	0	1.42374624803045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191480091-2	6.51347230301849	0.922286721328616	0.767681406965476	1.20139254769015	0.229598965557909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97898450809916	2.61290217134251
Merged-chr8-105714367-2	3.58282143970838	0	1.40826771478154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99962048-1	4.3874054071818	0	1.37528864850103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88299430-2	8.71543622989827	-0.194229077822093	0.619355127419742	-0.313598885717244	0.753825705948247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84534533489912	3.16982395992248
Merged-chr7-90216095-3	10.0678713674058	0.215350192199474	0.624911515475381	0.344609095634369	0.730388266887743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93621765520635	3.00247133792497
Merged-chr11-79161334-2	5.48281427701176	0	1.38851762106006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162649373-4	13.9529665856206	-0.646633204349027	0.481002646227056	-1.34434438026727	0.178837050565337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.17940186307171	4.50376607006285
Merged-chr2-156515892-4	15.2057001141115	0.329114588305019	0.481663019893581	0.68328805557407	0.494424840261821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6697027163858	4.70015629337929
Merged-chr19-28612446-1	2.69428058805633	0	1.44957944119936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-30266071-2	6.92453272310544	-2.32872681793931	0.94683908463609	-2.45947474679326	0.0139140486117649	0.253809989425143	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52597312980084	0.878778741524029
Merged-chrX-121232574-1	1.52240035606449	0	1.78725335147061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60490407-1	4.15702386333905	-1.01639403906581	1.10310235454867	-0.921395947415654	0.35684374381874	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27386322119676	1.38647389072186
Merged-chr8-117074748-3	3.89966941480551	0	1.41948346307183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-26635712-4	5.4433509349314	0	1.38528741666146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4618386-5	13.2821103078721	-0.472289355544523	0.505072681826608	-0.935091864078804	0.34974095906306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73354420044957	3.24336212345851
Merged-chr17-88545485-6	16.8958930128089	1.8437507705294	0.558114652820567	3.30353406994702	0.000954743673592538	0.0345992742352112	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9791255453587	4.88423642664067
Merged-chr9-104490873-6	15.1676983072235	0.766770210842286	0.487550279111411	1.57269976799064	0.115788353601608	0.994115794192827	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41790967700689	4.18975574501322
Merged-chr9-106215950-2	8.98552631291242	0.85472090574962	0.649872624111605	1.31521297256989	0.188438336519818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	3.14286104101227
Merged-chr3-121417579-1	5.33967907974745	-2.64390677414603	1.13850449755701	-2.32226291579814	0.0202187830739458	0.322710086942118	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7105221612361	0.577068348605183
Merged-chr19-55839325-2	4.1748344599118	0	1.36625232195991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43672285-2	3.12389389966555	0	1.39726519404724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164389758-6	14.8815121299816	0.378238420775935	0.415309869418235	0.910737857748889	0.362433511899608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96833810538277	4.18517129438895
Merged-chr1-9573349-1	3.23168063496272	-2.6217816833146	1.2444524519846	-2.10677529634297	0.0351370618127682	0.46929128822611	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	0
Merged-chr4-59497922-2	3.17954365686806	0	1.46468159748202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20788977-1	1.58509028123603	0	1.55525385546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140973598-2	1.64465133334288	0	1.72358110186604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13526414-2	4.45336125900296	0	1.466889898375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68189940-3	6.17259156922194	0	1.36401497318458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40350893-1	3.20497308072169	0	1.40624629202823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123932576-1	2.63643116066218	0	1.40998247826401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80823376-2	3.27393612127844	0	1.48041533821076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8905690-2	3.49816475213107	0	1.40188898104916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163401457-3	3.61265242247699	0	1.40402899390582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147760131-2	2.26528038306471	0	1.50996209462329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124068604-2	4.12903549185785	0	1.37725010228333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152742213-2	7.48962016129984	-0.101216340971755	0.613670225612239	-0.164936046670303	0.868994319792239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63051091633326	2.73182471363297
Merged-chr3-27614302-2	3.83113639906771	0	1.3760344833502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75191334-5	10.2848976353707	0	1.35390078428282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88496579-3	4.14186258790402	0	1.41024377030961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31190775-3	5.18149437496171	0	1.37958321077023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130782686-4	5.61105179198478	0	1.38045003745795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128377974-4	10.627867839914	-0.127486389282458	0.722355226357253	-0.176487114138227	0.85991127121878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16298459065932	2.56710344163769
Merged-chr10-80696110-4	7.01146789560183	0	1.37123294443427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41336966-6	22.7615681350318	0.176895364270032	0.445721157371582	0.396874506279181	0.691460004659691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0833050856895	4.22629881687482
Merged-chr2-31256762-4	4.47361628276936	0	1.38997549775932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132158435-2	3.4598941539408	0	1.41462550764924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91087103-4	4.99721869454793	0	1.37377244487886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17727000-2	4.19045990539647	0	1.38641390183732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80857386-3	5.53599676904791	0	1.35888327633068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93279285-3	9.73228371819876	-0.949811723602876	0.521617425003392	-1.82089722864741	0.0686224805566316	0.723923170109872	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76636813428128	3.89762922653817
Merged-chr6-48016347-5	13.8951070183277	0.157459003470715	0.474962987097648	0.331518471434793	0.740252890908999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4351330970797	3.77152162095565
Merged-chr18-69667426-3	6.04190546061773	0	1.36849097667299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50996486-5	12.5155151004263	-0.358908269851465	0.550289095398785	-0.652217666772717	0.514260764603023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67155452884011	3.3336373739741
Merged-chrX-78483245-1	2.02797868780089	0	1.51270951937756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74897821-2	2.48105091100277	0	1.48912512575678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115076964-2	2.85007938416613	-3.33721117325669	1.2388104053416	-2.69388371204104	0.00706248005424014	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	0
Merged-chr5-140749289-2	4.37939992001594	0	1.37956964227792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36936558-4	7.6647057194526	-0.100518363492205	0.797509726557445	-0.126040297873363	0.899700025826052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17813337661218	2.01550095944652
Merged-chr5-72554561-2	3.0408236723958	0	1.41945277247993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102681159-4	10.1345634587025	-0.718225162581011	0.952854927717416	-0.753761293234359	0.450992569926312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	1.17788344834821
Merged-chr4-133178519-3	11.0940740046745	0.826571203033127	0.485063640503094	1.70404692088616	0.0883723217403848	0.841596187366079	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79673827662116	4.5716838688089
Merged-chr16-78317039-4	5.14870062583153	0	1.36006609387711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45092984-1	2.29229746765348	0	1.53039103644741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11875416-3	4.30830246484413	0	1.44966541057227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24950487-2	4.37901248217999	0	1.3620064585108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136678826-2	4.9681155556552	0	1.46723051835124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114347202-2	9.26282671565524	-0.232502593024688	0.695124894413365	-0.334475998332505	0.738020399566843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53371746902528	2.65780348696321
Merged-chr7-110250884-2	3.57688246315082	0	1.38854933159033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47276869-4	6.4939998005694	0	1.38592158262628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53741196-4	5.89522644260955	0	1.36092814550232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113877605-4	6.02216793274731	0	1.35887106619182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8676849-2	3.47500421106727	0	1.39875345550109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88677535-3	5.7250787828184	0	1.3699563540588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129082936-4	5.42223184725058	0	1.36569428341308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96874246-1	2.12712306011607	2.41138381846758	1.471738418789	1.63845951677456	0.101325872411706	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18909650862134
Merged-chr7-116414726-2	2.07756684415345	0	1.56595549272693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69891048-1	3.85639743307112	1.0181691964923	1.12077091201588	0.908454337613888	0.363638228376773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.97731223551783
Merged-chr3-107953523-1	2.28576661341521	0	1.45050356439132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143373924-1	2.7518533938982	0	1.43663816880999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148419812-1	2.08674309467516	0	1.46545328679994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105018146-1	2.52822232198462	0	1.51919461358829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38004452-2	3.95745226869253	-2.92034378239599	1.13659642773039	-2.56937617534791	0.0101881794921485	0.203909885498416	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62680317507726	0.600815099743027
Merged-chr3-127446384-2	8.11021714803099	0.151069238032496	0.811011689908571	0.186272577710349	0.85223101091674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1328222325954	3.19216138124417
Merged-chr13-81132519-1	4.29600434975677	0	1.36829182441792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23604075-1	1.14008149589893	0	1.62055932337081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39257098-1	4.29501275213109	0	1.36856786600517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60817791-5	9.13478555967471	0.942097679078086	0.796972683871251	1.18209531912926	0.237167881509938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26336120057495	4.08362108576201
Merged-chr5-24598753-4	5.64946257665717	0	1.36582665476389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79051008-2	6.52737462644498	0.610222206689193	0.95969610449296	0.635849415072487	0.524874575842158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59982791176663	1.71126179922049
Merged-chr17-10572658-2	3.02010556309108	0	1.41816901345469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43908743-1	2.71493644305227	1.84894749626082	1.58819486825537	1.164181759567	0.244350360632739	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr13-60613764-1	1.89496859252409	0	1.50670337486147	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119416494-1	2.98590166020084	-1.21182799453733	1.23447551779855	-0.981654133326514	0.326270268865869	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14637975729418	1.46460328489499
Merged-chr16-35755890-4	9.75608741703218	-0.309005576194982	0.627537647622538	-0.492409622539249	0.622429798185725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71204808382565	2.22672895781331
Merged-chr19-24471667-2	4.90016572083721	-1.84285911084976	1.29908843761038	-1.41857864137381	0.156021896448387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr16-15990875-1	1.9490611673169	0	1.43747996079178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45026830-2	6.37110199349967	0.350418128205229	0.715520637055377	0.489738674271261	0.624318831223798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87840500255722	4.3023637763225
Merged-chr2-122407513-1	2.06219481010874	0	1.46565749091137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113911366-1	1.90369208433577	-2.62791766222794	1.47044484498107	-1.78715826791978	0.073911912119531	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	0
Merged-chr17-5625731-2	5.86142247425921	0	1.3546825522472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63927094-1	5.41221968061425	-0.034736473445534	0.93969687915019	-0.0369656154194614	0.970512421912345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	1.30281892590853
Merged-chr13-15846060-2	2.59102920391251	0	1.49073297087621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72145566-1	1.89224799093757	0	1.57413745494918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124708426-2	4.74647351761118	0	1.38474451962944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85193014-1	2.89407892329385	1.76640466154003	1.40946549453218	1.25324434574138	0.210116795751437	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr10-19191701-2	2.804368746337	0	1.46825997035701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64610162-2	10.3692059821254	-0.56642493647968	0.785931108680574	-0.720705581218941	0.471090677789381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44404506879557	2.07499832818087
Merged-chr2-152693428-1	5.02762734456025	0.578863120482613	1.033031201821	0.56035395587491	0.575238031308106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.94927122251658
Merged-chr8-83146182-2	7.18865007974461	-0.498615057469903	0.795083936010125	-0.627122540007592	0.53057891317889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63065734819575	2.97644976767518
Merged-chr13-90452511-1	3.07708824547923	-1.03828457667459	1.00788385929031	-1.03016291718937	0.302933534179894	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94638558187799	2.42913351836971
Merged-chr2-59541706-1	2.01923923448474	0	1.55106392136338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100679154-2	5.30317671991791	-1.14866408636462	0.945029252133269	-1.215479926967	0.224183100100714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33904733505278	0.815775955292901
Merged-chr8-24430687-2	2.84734844188867	0	1.94088584258872	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33232225-1	2.63584596695123	0	1.42538368653776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116733796-4	4.89701954906571	0	1.41523412992098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96949350-1	1.58848775428991	-0.67560618779726	1.5454959564011	-0.437145231599637	0.662006026060274	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr5-66014170-5	10.29471602449	-1.64622481348204	0.843019868979313	-1.95277107225861	0.0508467277413166	0.595684757174618	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30302996175038	0.953310774576147
Merged-chr6-137747718-3	4.52168794263671	0	1.38290753084459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106903990-5	12.4194921554807	1.40509901352585	0.447542113851452	3.13959059949436	0.00169184090592138	0.0543538887736291	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43724108861284	4.91007222178495
Merged-chr2-133499102-5	8.08402798697956	0	1.35693729518532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37462387-9	35.0401187369702	0.0872219142837423	0.335370563516124	0.26007623736944	0.794804967208352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79930226535171	4.90214330417287
Merged-chr7-100533551-2	3.10290255088543	0	1.41505364829974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82346651-2	5.92783763522027	1.4859917396264	1.26399359189637	1.1756323363926	0.239741827944081	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.97908007631626
Merged-chr11-94506147-2	7.01724480735815	-0.130027667304893	0.709951240447732	-0.183150137498022	0.854680217007922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0228027030022	2.38080482428767
Merged-chr1-171260579-4	9.26655189011514	2.25041049396352	0.668748603862198	3.3651068293329	0.000765140281038289	0.0291466436839246	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961371261847668	4.34234762555719
Merged-chr11-70849391-3	15.4921831460727	-0.359458755085199	0.485819609976885	-0.739901699526501	0.459359643119451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47437886928521	3.98084509071766
Merged-chr11-46035314-4	10.7640774840179	3.59623595807246	0.809460518145535	4.44275647478323	8.8813668677754e-06	0.000808680438133003	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	4.35950249378939
Merged-chr2-83767142-3	5.05492475976364	0	1.38697849038864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67449578-4	7.42515768174168	0	1.38392022091748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60674424-5	20.6997180675083	2.12546602797252	0.748638674575728	2.83910797044659	0.00452398464351203	0.114647683560219	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	3.44186993502141
Merged-chr4-129792826-5	20.2530489524012	-0.47557075842466	0.504135866670978	-0.943338472553152	0.345507803254425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.26676476006597	4.70557512860376
Merged-chr11-83605720-2	4.17349594026454	0	1.37948866633312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121466679-4	11.1908084862254	-0.372119098276292	0.532535950867178	-0.698768031848996	0.484697009894059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98010924297712	3.36493575657359
Merged-chr5-64322533-1	4.16310633563425	-0.619770481702718	1.03883996676697	-0.596598611460376	0.550775398521621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30811930973386	1.41478649953382
Merged-chr5-31908173-1	3.82146193784164	0	1.39089114420846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10856902-3	3.9400125375953	0	1.37334855493208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-24517034-3	5.15938202764649	0	1.37144082623165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69202490-3	10.7989192633522	-0.219315262038294	0.59092333462949	-0.371139958749142	0.710533290253032	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11266628444867	3.29892209530635
Merged-chr2-122022481-3	10.3796723787167	0.863899255839542	0.634283386688423	1.3620083293525	0.173195256476496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16609404538456	3.24390447199479
Merged-chr2-30435974-4	5.09801065691003	0	1.37317638818529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80582331-6	17.5457702554156	0.893484931049111	0.419558270880999	2.12958483495737	0.0332059041617103	0.452181443573825	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88751210489832	4.68926824984297
Merged-chr3-10466100-2	4.65804475447215	0	1.38398199391653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124787211-3	3.99398083415042	0	1.3903674114943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-57237224-3	4.59581912550439	0	1.39576382361584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-21973666-3	4.23812400448111	0	1.43609536845114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84251021-4	5.50942859676037	0	1.36622584860198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20407714-1	2.24462148299981	0	1.55488428153359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104985895-2	2.95000976203224	0	1.46440858605167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55037701-1	5.03817671583267	1.87281246586777	1.16757862522877	1.60401400419678	0.108710965766402	0.960485099695701	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.14165029359488
Merged-chr9-64806067-2	2.9261774508517	0	1.51640946244074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143512471-2	3.39043769103656	0	1.49518564960699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152288119-2	4.09680589459481	0	1.38145981209677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25289665-1	2.35774217082654	0	1.48232472265867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30508134-2	3.71710114181046	0	1.3772577912321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81534169-4	13.9628523487678	-0.591617987944778	0.57300844702256	-1.032476905042	0.301848761274539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08280498184314	2.9099056008737
Merged-chr5-54005663-1	3.43498101896739	0	1.38886414255287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4922074-1	2.51126228084624	0	1.40048923992326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52682795-2	1.7553960865467	0	1.79062324775677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154274914-1	2.07615813648592	0	1.62840349264224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17586009-3	5.58349432410561	-0.921316814512603	1.20386721274547	-0.765297704562866	0.444094290602391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27465395918041	0.465515277017237
Merged-chr6-134620969-2	4.17420922876706	-1.22174202423863	1.47474446133639	-0.828443202377926	0.407419548409381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr18-66494751-2	4.34849851159149	-2.74750612841823	1.25149223852418	-2.19538407338285	0.0281360586014245	0.406335815492782	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	0.303163067301871
Merged-chr1-80715743-1	2.83096837161352	0	1.40957776268532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-69249355-1	1.93588690404445	0	1.43151750829568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80032948-2	3.77437579946219	0	1.37889411108745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120926413-2	4.0667228357191	0	1.38598549679559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127294082-2	2.33827099994795	0	1.71059926007447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116202786-4	14.4625952645298	-0.690846593759283	0.485395243643009	-1.42326609666447	0.1546590312541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.85176192945568	3.86492767639889
Merged-chr3-132029286-2	6.43310815247798	0.944530608136254	0.74134364850271	1.27407931536733	0.202635308233854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	3.01905864107165
Merged-chr10-127561407-6	16.6719672957298	0.0436712355847961	0.326375440597652	0.133806745706191	0.89355539286673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82568816967688	4.8886181601682
Merged-chr3-109478532-6	15.7324059676614	-2.40386448381214	1.00406364062432	-2.39413557722041	0.0166595894505853	0.285773294176068	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09849478765844	0.601513806634888
Merged-chr15-94683874-3	4.49355105002425	0	1.39430793674487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117918941-4	5.99137190050102	0.347961448043201	1.09990922586504	0.316354695333646	0.751733300274491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.815004392037195
Merged-chr12-34725330-2	6.30669069311639	-0.403485218970357	0.860893294531524	-0.468682032411372	0.639296931795235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79065328655757	0.948471875794396
Merged-chr4-59178186-2	6.68795002137442	-0.697076265883492	0.814406242256603	-0.855931879834311	0.392035459959356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53576222657069	1.41437199749648
Merged-chr2-119250994-6	13.3018597305823	0.0789111593092959	0.592401162979906	0.13320561173843	0.894030772874462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97844572449181	3.87332149490045
Merged-chr17-26640448-2	4.65609668820345	0	1.41780871965574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87415014-2	3.70713881413728	0	1.37065460424674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30848779-1	2.92504227502793	0	1.41724768142181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72758823-3	4.44472097518102	0	1.37723708712718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34522189-4	10.378137426627	0	1.35184944331763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45385077-3	9.65306863185775	-2.30430075404043	0.67097625498185	-3.4342508202511	0.000594194100545379	0.0244510197664998	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11308565624957	1.79305269258721
Merged-chr4-59241237-1	3.05870002986964	0	1.43453230274263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37659981-1	2.44021684986994	0	1.4777118592901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129812201-3	5.46968096497536	0	1.46920711503464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73610308-6	16.342310761517	-1.03735849008566	0.532181276890137	-1.94925777199	0.0512646488064197	0.599805218353028	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79566968813091	2.74322452051939
Merged-chr14-75066107-3	7.38183829283754	0	1.36489293432466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43230024-5	10.1998955891294	0.20625833992069	0.442387650697504	0.466238918729956	0.641044494591882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05388155038342	4.27932422869746
Merged-chr8-124085819-4	8.62006293456672	1.10011190465751	0.959807281727209	1.14617999425657	0.251720683840334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.56203317187393
Merged-chr17-40716468-4	11.3789648735926	1.71611196489908	0.596250933993471	2.87817069468586	0.00399988644111639	0.105038563793549	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	4.5269837657011
Merged-chr15-58585639-3	5.31791933254555	0	1.37160274783779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59486342-5	13.6929044381626	1.11119673088861	0.617510254838231	1.79947899193951	0.0719429441476433	0.744336981522981	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	3.24820232524987
Merged-chr2-21141872-2	5.76849003899196	0	1.36596088996956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67569321-2	2.91830721512548	0	1.4586966740665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102615802-2	3.08213244453623	0	1.38645509929393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46577689-4	5.40617322154662	0	1.42225014609792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122801976-2	3.35318215749128	0	1.46953766008382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12251945-2	3.52841063958504	0	1.44762537161481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81191504-3	5.17302294211951	0	1.38288967121173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96977875-4	6.74104975318921	0	1.3853277274816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45772775-2	7.15500802080597	-3.32510679262403	1.09412310657662	-3.03906093623038	0.00237316847075081	0.071036930011863	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69681453037171	0.413263464506793
Merged-chr8-53505646-2	4.8822871292524	0	1.36913865355472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50482945-4	5.72155468998928	0	1.36638124022972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131931038-3	4.97833149120765	0	1.37040220654271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78156897-3	4.40011363595971	0	1.40500000536545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80679766-3	4.34706859184272	0	1.36642338854486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92441101-1	2.56154730476102	0	1.47841940020301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111037525-4	6.45194690791851	0	1.40261263943187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37214765-2	7.16909849319774	-0.169006469207531	0.932868104581593	-0.181168665085118	0.856235189221941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	0.948404007588321
Merged-chr16-76977168-2	6.53485724582015	0	1.37440761886864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35163398-2	3.69433571082904	0	1.40960371374172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48821658-6	17.7370899239944	-0.0220124014491502	0.394577231320911	-0.0557873077862606	0.95551124611704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84375949772059	4.90764461776428
Merged-chr18-9556053-3	5.05693378817425	0	1.36845653194883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96503461-3	3.27188140173338	0	1.41163474829082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71441660-1	4.60593926223388	-1.36348942697561	0.931522923362931	-1.4637207445773	0.143270265056425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44771839090964	1.39949824061849
Merged-chr9-106314856-1	4.720889635753	-2.17569269456916	1.12125769941838	-1.94040379450481	0.0523306358156605	0.608609549059369	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03169262342392	0.465515277017237
Merged-chr11-11746378-3	3.80337875933256	0	1.43775835838038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74328317-1	3.69618285513523	0	1.38599125434019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57607649-1	2.2373210052687	0	1.4690611495299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171164473-1	3.6992315219798	-2.53475268012949	1.13440953572558	-2.23442469434836	0.0254551423732881	0.379620324902487	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73745702279306	0.465515277017237
Merged-chr7-71874821-2	5.41588908903428	-3.26611382616437	0.993599141657616	-3.28715443605913	0.00101205314998028	0.0362173779985371	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00987897767858	0.662147012823607
Merged-chr14-121956573-1	2.35610880894992	0.701939237857654	1.1508575801588	0.609927109973762	0.541910093132878	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.27992882773773
Merged-chr8-95419290-1	4.76301552278385	3.17960726411416	1.2031729362817	2.64268516040632	0.00822514785343689	0.176162993768325	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.61224616757942
Merged-chr18-49705639-2	4.52555262632051	0	1.37591807383231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110248815-1	2.37899671656241	0	1.41327288737423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27171346-2	7.00551868988539	-3.66891973419615	1.10866195426048	-3.30932230523186	0.000935221096988775	0.0340506923048981	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16430127775811	0
Merged-chr19-44496660-1	4.09796402706892	-1.17467571010597	0.860213118841818	-1.36556358462371	0.172075982881581	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2728276532209	1.63175807346403
Merged-chr4-129877711-1	6.5436305904971	0.0873922505963117	0.764772652556544	0.114272196193431	0.909022022322574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51392650184912	2.38875756001854
Merged-chr1-39768080-2	2.7337079264126	0	1.46726061877195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125404217-1	5.21886070282092	-0.747535551432412	0.819665876003936	-0.91200033247306	0.361768542540654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65139029413517	1.6794096906117
Merged-chr18-26905801-1	1.68306784817347	0	1.50526490007586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79525756-2	2.25495577526906	0	1.46474590703176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136573690-2	3.52462330066492	0	1.40301052887043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41760223-2	2.99203705978838	0	1.42418690127122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129549271-1	5.12590119661127	-1.41944512882395	0.714833434106727	-1.98570052979925	0.0470665861559613	0.566288746536499	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41036269784269	2.70495415098465
Merged-chr4-4596104-2	3.25102545638333	0	1.4530259189582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53991137-2	5.72353761309119	-0.164751045269103	0.770175953056172	-0.213913514977125	0.830614500743676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4001121120857	3.24156486142669
Merged-chr12-3696322-3	5.15829289088391	0	1.38054749659606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85001535-3	4.88562455291761	0	1.36906355711282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80067410-1	3.64175719542097	1.18306094144608	1.41662634774487	0.835125609042499	0.403646989122655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr5-103721181-2	3.91986275480042	0	1.42574616038807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102225542-2	3.3338096649031	0	1.45504755357536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-56429525-3	4.00789701699682	0	1.38123065160916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25227745-1	2.66891703192929	0	1.44145676502312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140636848-2	3.79157495562892	0	1.4529419244853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-77198615-1	1.37764010044377	0	1.54826619897794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-33807048-2	3.9156180982425	0	1.40349030063723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40609928-5	16.3383749496284	0.476784905316998	0.653335611604702	0.729770269442277	0.465530620286718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0500197815571	3.33036691592832
Merged-chr9-94703622-2	4.81557905533386	-0.301416942295242	0.892349938282399	-0.337778857110038	0.735529843987017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	1.38572824442771
Merged-chr3-136086640-2	4.92533747033654	0	1.39168511141249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34573964-2	3.20604704142283	0	1.48152190053275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18627590-2	5.83358066601166	0.481839532260146	0.938320486476575	0.513512748793826	0.60759269520602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.49169296430729
Merged-chr5-25526276-1	1.83403205683896	0	1.45600385358562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85689485-1	2.35792433407148	0	1.46886547757903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24388966-1	5.00025499634416	0.932784439632596	0.963624196826283	0.967996074304424	0.333046330283775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80442813729532	2.53645214523302
Merged-chr11-119449682-2	14.4202903238812	0.281599277011071	0.7740954397042	0.363778498835592	0.716023419638675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85953480160324	2.26225136245445
Merged-chr5-43879973-6	18.8768517733492	-0.3188717718414	0.453491574185619	-0.703148172960061	0.481963413641115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34454028800689	4.17516663125695
Merged-chr13-12635189-2	3.72390749262421	0	1.39134690901786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74026470-4	5.0867779292298	0	1.36469850082625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99252971-3	4.31850919485691	0	1.36705479179815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99974763-3	4.25612065780173	0	1.40255728217314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35011739-5	7.31878399734245	2.6849732462868	1.13493979914492	2.36574067480027	0.0179940434503	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.69069428015607
Merged-chr7-81904345-3	4.81446251361399	0	1.36751584246169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8927710-5	12.9071389484597	-0.200108548676634	0.48291578592851	-0.414375662398118	0.678599009843365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63005552808825	3.45478445012315
Merged-chr3-27289048-4	7.42659289361595	0	1.36281083972692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86428380-2	4.7563031854039	0	1.36251740496493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62182669-1	2.96337993363042	0	1.37776464377959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86825151-5	11.1568971689793	0	1.34860373823521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-114970938-4	6.82997195689366	0	1.35551989713068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80670598-4	5.49909221205064	0	1.39415335291297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13740965-2	3.1785062578293	0	1.38710191926899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37365657-1	3.73491889696038	0	1.38398913687905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115539765-4	5.77667836084975	0	1.3569902178936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84235723-2	2.64611010778554	0	1.43801550868933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95497121-2	6.13670349060853	-1.65659525039946	0.890003422633784	-1.86133581991978	0.0626967677580387	0.685741166712118	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57078032519388	1.39949824061849
Merged-chr11-64837964-4	5.80860555082757	-2.23971402168573	1.22766624669326	-1.82436719077228	0.0680965786614916	0.720770871637153	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr2-35442265-5	9.68186568652571	0	1.34688008599153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31139973-1	6.42216558990394	2.51659839699752	1.11524123390453	2.25655070893204	0.0240361633208224	0.364457964283566	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	3.01032657882246
Merged-chr12-44360480-1	4.14074756432888	-2.56771043919323	1.24229712252293	-2.06690524564573	0.0387430833634964	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0
Merged-chr12-52003014-1	2.87847438554393	0	1.39022445703846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32910253-3	4.14481729357091	0	1.38157368425484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27969521-3	6.65464065940875	-0.403185471120497	0.710378318419122	-0.567564438083846	0.570330760166052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05043424441622	2.16285061185201
Merged-chr2-29649911-3	3.96095773559622	0	1.4085983474265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-45452859-2	3.81731444014255	0	1.39183745677067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182961903-2	3.93703104123048	-0.0357059050315628	1.38779661847851	-0.0257284853963029	0.979473903313015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.413263464506793
Merged-chr10-117910111-6	15.5707019505406	-1.37738299697355	0.501270469013027	-2.74778404497983	0.0059999513349928	0.140853065828587	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09454463499594	3.00717000215863
Merged-chr8-125559228-5	10.7419813330765	0.331074120136887	0.674147962271926	0.491100082867779	0.623355662906611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85731693530124	3.09410265328605
Merged-chr12-8359581-6	14.6841653556323	0.246237103673738	0.631296312943041	0.390049963266544	0.696499601682343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02319887197476	3.14519125155031
Merged-chr3-137846773-7	15.1614967542491	-0.455306710429626	0.57246303493113	-0.795346917874621	0.426411728544895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12487291087101	2.87571429371836
Merged-chr13-52277406-4	7.46100642699685	0	1.3640577315821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53758228-4	5.9841384082089	0	1.3745192127368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34073927-6	12.892045595574	0.273408025753563	0.519376486619844	0.526415871332432	0.598599290634914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77079788717642	4.18559700867483
Merged-chr13-103869068-2	3.61175121827212	0	1.39449540191314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135276965-2	3.51921221725933	-4.20820373372437	1.21158979770711	-3.47329082969189	0.00051411792788202	0.0218506148879896	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53247394686427	0
Merged-chr17-23610698-2	2.8944868749044	0	1.47183625666284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131965664-2	3.26754469506684	0	1.40695325153397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69664731-1	2.21937019922739	0	1.4634174939172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36521963-5	10.9966634683494	1.07421999215026	0.581588266246528	1.84704550365689	0.0647405456646658	0.698915207040709	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60280255630439	4.17672227000793
Merged-chr1-181395368-2	3.39375782324326	0	1.45675364990975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72361453-2	3.54108790800047	1.77607165322444	1.36273063845055	1.30331820765684	0.192466147490208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr6-43477950-2	3.01569755869181	0	1.42994522910553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95827046-2	3.2508168899226	0	1.40600072845989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79221814-4	9.95490619409211	0.087514106404308	0.54416245159642	0.160823493329182	0.872232421087655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7271518555089	3.51949315065325
Merged-chr9-21864653-1	1.90631324244582	0	1.46596121903117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38291577-2	2.20091964466151	0	1.41807818478622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86548489-1	2.58408344154241	0	1.44425763655864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9753865-1	2.68601937080425	0	1.41632546082998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131298842-2	7.14623038648999	-0.910341440607244	1.0430358715106	-0.872780568216527	0.38278269308797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.723581231604105
Merged-chr13-9152451-4	5.09324363957294	0	1.37683968880285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65533561-4	9.85071361002864	-0.614183528253432	0.57288627313922	-1.07208630586995	0.283681269069273	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27911815519311	2.5323898788085
Merged-chr5-45474396-3	4.41992729999133	0	1.36938267946555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69628478-3	4.53511866692731	0	1.36792993346661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51870344-2	9.41970863752937	-1.39464856214017	0.560799584035648	-2.4868930039212	0.0128864149171561	0.240471207855026	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67839749222331	3.37210826207229
Merged-chr4-59450393-3	4.97466100738758	0	1.38946510323021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90869900-3	5.99904982273639	-1.86732967412162	1.2555067691426	-1.48731151437506	0.136932554808836	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr9-66361925-4	4.45927504974975	0	1.36383900392871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108688509-4	5.65397064367095	0	1.38975074564503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85449693-2	5.21920167520817	-2.27597649534541	1.28812938111558	-1.76688501070778	0.0772474878074852	0.777466430240157	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	0
Merged-chr5-66299144-3	5.13941151578868	0	1.37653168908851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8836844-1	2.22035800540395	0	1.40645550302479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118615695-1	2.23716828853684	0	1.42484387731865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125030722-5	15.1892767723932	0.555183277094537	0.40261360803995	1.37894811801654	0.167910750807486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28134613944985	4.86940034200575
Merged-chr12-13491952-1	3.93873863571434	0	1.37658677869205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151917926-2	5.21986564014217	0	1.39187989686742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59559800-3	4.75530863544069	0	1.38551634251394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21992357-2	4.43235747516111	0	1.3930316400017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129791164-4	7.57607190361117	-0.614434994977144	0.671023374941511	-0.915668541398726	0.359840769681471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68181707901987	2.43838107182295
Merged-chr17-48558007-2	4.16204475935254	0	1.40996213873891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89864903-4	5.27825907023015	0	1.38992173885737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125328463-4	6.00484924409982	0	1.36361866241503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52093065-4	4.35371094896723	0	1.38120378669566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80295791-3	7.70299332330734	0	1.36076295005724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141835313-2	8.05128928669944	2.31119215057447	0.807219399655315	2.86315238652757	0.0041944877960346	0.10873064478047	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59982791176663	3.78997723192375
Merged-chr13-46634283-4	6.85460350281472	0	1.37808061060077	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42296353-4	4.70801033163258	0	1.37968745261839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36758662-2	8.54996842348037	-0.275356246613241	0.530416540467206	-0.519132088849829	0.603668632618263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86266584564175	3.65456050476541
Merged-chr1-167343881-1	2.65745949595819	0	1.42529129619773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11166710-3	3.95846957052002	0	1.37524285093575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14086013-4	10.247480561913	-0.124079539980134	0.637697109173811	-0.19457441188794	0.845726136528417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24987105754228	2.72747239241114
Merged-chr13-51350988-2	4.1639179980524	0	1.3827682113339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8979109-6	17.8090815268849	-0.305042942344013	0.410718870448201	-0.742704960235044	0.457660326018881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.04463694200494	4.69162532615832
Merged-chr9-48547409-7	20.8298159816618	-0.417025254302984	0.447606553239132	-0.93167816977914	0.351502871563604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00355813657548	3.71121334829302
Merged-chr6-92989334-2	5.35600090699301	-0.559271996239353	1.3011595995358	-0.429825823395437	0.667322346734974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.600815099743027
Merged-chr2-141030882-3	5.28446179723628	0	1.40016531919091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10132774-2	6.63687602435797	0	1.38168328505624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25009447-3	4.27632360288763	0	1.3902737095239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61143500-4	6.76873105502731	0	1.36020427255517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-79816227-1	2.46971180135072	0	1.45243035684577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88272079-1	3.05942615869359	1.80515099811938	1.36874998685808	1.31883179211058	0.187225353114347	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.82011828833849
Merged-chr2-124669427-1	3.21827722465169	0	1.45605237959608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122090757-1	1.9406709863615	0	1.46439158036646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123633966-1	2.94681610620431	0	1.42217275856164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26526387-2	2.98898248795378	0	1.41957827118523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79994499-3	10.232352628123	-0.0429533747492674	0.589029257269692	-0.0729223111061881	0.94186793951244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42179352332542	3.9240068719111
Merged-chr7-81195667-2	2.23966153552863	0	1.5176110614845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85596798-2	2.88031007021279	0	1.44611203699533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34256868-1	1.39345855359304	0	2.03331270073407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-33274513-1	1.72881871418854	0	1.46887848583926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129379635-1	3.95637585841984	1.04772457605923	0.896091775709168	1.16921570363712	0.242316735765059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00660696565396	3.65777623110245
Merged-chr2-19048395-2	3.55177881888409	0	1.40462648813877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26607355-1	4.92456421670807	1.28697684170748	0.822682590388514	1.56436620483205	0.117731592513357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	2.95723768925419
Merged-chr15-13371527-1	2.29323652783002	0	1.46960375615822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85519027-1	1.15059208418015	0	1.63107870117786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22201078-1	2.3459669680424	0	1.52098196597432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100464931-1	3.75272753633186	-1.40650646219566	1.14370608197898	-1.22977964737404	0.218779631666118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73634229948794	1.45526469271556
Merged-chr10-7269337-2	3.28246802043184	-1.28763538645789	1.23339852798105	-1.04397350673478	0.296497647218211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	0.55634759613363
Merged-chr16-94501719-2	3.22174288616843	0	1.45955045527256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128703670-1	3.4146168143115	0	1.39452432970572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107842559-1	3.183141258926	0	1.43128391851962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145804123-4	8.79275326599097	0	1.38990943079123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17590404-4	9.39223457220514	2.62734285668757	0.820899536906771	3.20056564605659	0.00137158121529032	0.0462065020961246	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	3.54126968238427
Merged-chr14-75148433-1	2.65156808191906	0	1.41645166308024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67415351-1	1.45891718083961	0	1.82542333595553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42955033-1	2.83141471411247	1.1035091035191	1.05936591855777	1.04166944035865	0.297564961958179	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.9751483064943
Merged-chr6-148407222-1	5.73359293928263	1.52670881357663	0.774853012215994	1.9703205504879	0.0488016446432243	0.580229352834871	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59112851718609	4.36493592769079
Merged-chr2-104996483-1	4.46226486005785	1.25312520069837	0.970000079776468	1.29188154395529	0.196398170144736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.95685815637649	2.59991996435221
Merged-chr1-51944951-1	2.79211993151732	0.727909871371913	1.09690176631905	0.663605341629279	0.506942937597143	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.737158151675
Merged-chr11-64816551-1	1.33033426593682	0	1.68951532781707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59440651-2	3.10350754958382	0	1.40257882012087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189654568-1	1.8467911328704	0	1.45221123809573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31343784-2	2.40783443675438	0	1.50781840343498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3975215-2	3.04350394788512	0	1.39846222679535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20728248-3	8.30880585585919	2.46386186912226	0.913777624466694	2.69634734223246	0.00701045228458698	0.156437264260207	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.03248631275913
Merged-chr16-13644681-1	2.16550274160689	0	1.50223230590613	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89980519-2	3.48254034277674	0	1.45639808735398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30564288-1	2.69981296681576	-1.49586606810894	1.28004758967595	-1.16860191775184	0.242564055233529	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0.41385117919798
Merged-chr11-97433320-3	4.66817265529595	-1.77436913145658	1.30536349066492	-1.35929121976037	0.174054325222512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr3-59241733-7	15.8071386815335	0.783127451225542	0.520587628559083	1.50431437142126	0.132500440395212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65217534908732	3.88366041463917
Merged-chr14-56690896-4	7.30292579585358	0	1.36583756344589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126887493-2	7.38150469427005	-0.212992601720316	0.697712920118635	-0.305272549179826	0.760158581278998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52853922112505	2.86523152519899
Merged-chr18-44387306-6	11.885696470683	-0.907978977240267	0.66657965864224	-1.36214624234069	0.173151737183902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01803077266863	1.84423004237474
Merged-chr13-52628751-3	5.18561028288571	0	1.35683777765067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44908230-3	5.21951499470873	0	1.38070592862259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79752005-4	6.09358747833633	0	1.35037760393129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116220179-2	7.74075572650756	0.020805585002292	0.627977292175278	0.0331311104104141	0.973570033841968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08852051181778	2.80541842082143
Merged-chr3-135851776-2	3.13252147831416	0	1.43689583272576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38655401-2	3.70580422964701	0	1.46104391047167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36894715-1	5.61570911251175	-2.21564453134298	1.14776275329904	-1.93040288594006	0.053556937636717	0.618435705416557	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0995156753045	0.465515277017237
Merged-chr17-6972935-1	5.76596077329178	-0.130497867281927	0.914146373635738	-0.1427537985661	0.886484626665895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50954942419772	1.66683653681755
Merged-chr6-72851755-1	3.9526230708673	-0.0384849572519474	1.22101021681437	-0.0315189477712603	0.97485568151515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr11-57524822-2	5.98669488739	0.0707974587382041	0.981524882080491	0.0721300702923986	0.942498395911834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.09662457429765	1.38910170141189
Merged-chr3-137853466-4	7.05649050622193	0	1.40089666351885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72221524-2	5.4656592964991	0	1.36294438747872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53822092-4	5.00330936173749	0	1.36134464245922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52446085-4	9.51903782374385	-3.5494139582767	0.973361299910717	-3.64655340067689	0.000265781264389221	0.013206219150762	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76020906232748	1.08918047352118
Merged-chr1-23247155-4	7.14137298882147	0	1.35600831329024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32912547-4	7.74396521308331	0	1.36395908489448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13470484-3	7.39126171851921	-0.983193394487576	0.759466068649652	-1.29458501844028	0.195463423276618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77743761853437	1.30281892590853
Merged-chr10-94095383-1	5.10375402804583	0.794637111272078	0.782352760559972	1.01570180528706	0.309771408097191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69735600200997	3.09442756568703
Merged-chr3-152569356-3	4.73862083562505	0	1.38186669141804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112976652-1	3.56818368592333	-1.28786463321792	1.3214674413661	-0.974571595866608	0.329772808834791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6950503635711	0.765562747387088
Merged-chr9-62367853-1	2.55235721852547	0	1.3934245059899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3897084-2	2.61193432929792	0	1.43862044976643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17579942-2	4.45034663506461	0	1.40810027570399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104403858-2	5.19913108077203	0	1.39016132252343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46043245-2	4.88827533514301	0	1.40060477362336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25800368-3	4.3678485762732	0	1.3896799658814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129582273-3	9.97488817295159	-1.61463340153919	0.656988558331274	-2.45762788569758	0.0139858005486343	0.254606206303821	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5782094147304	2.41979064294981
Merged-chrX-133692314-3	4.30217898990253	0	1.38769246233087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53775347-1	5.01981023394608	0.256797081222958	0.784794523707224	0.327215689541125	0.743504754967244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	2.88440387029755
Merged-chr15-66536622-4	4.49256804982648	0	1.36596986986761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101844633-2	4.28822671761355	0	1.39727521469822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124708012-4	5.9664039417831	0	1.36228052328172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123884104-2	4.17815869348648	0	1.44751519559807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17131269-1	5.35300673928731	-1.36635600850852	0.9102449371135	-1.50108608441307	0.133333297549244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3697525094638	1.18909650862134
Merged-chr13-52818949-2	3.07072974879028	0	1.4543255071576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58677453-4	17.6437147493086	1.5830608471775	0.659554049648951	2.40019881315275	0.0163861693190036	0.282325127737469	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56104072393284	3.36330420380352
Merged-chr7-83801675-1	5.67642244335639	0.691988539252294	1.06319318274412	0.65085870609729	0.515137699780943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.04648494364547
Merged-chr1-156464433-2	5.55291395327934	-0.447092527182311	0.914153634548833	-0.489078104910633	0.62478640188225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96122493412986	2.4263948439109
Merged-chr13-99242231-2	2.38917610329747	0	1.61021787826197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-25726586-2	3.97950104028871	0	1.43063442104765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124261925-2	9.16834489846295	-1.65349222575285	0.630389091097787	-2.62297087481858	0.0087166723730045	0.183774892043929	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08892887812029	2.39585097459317
Merged-chr3-41390017-1	2.54017498020419	0	1.45708709083893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40217831-2	4.62299646642395	0	1.43119277489667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101964768-2	2.51690732788411	0	1.43630037651121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61231543-2	2.96603365312734	0	1.46771044452559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44571685-1	4.09508602459054	0.856773509075295	1.09297842480299	0.783888766358521	0.4331053819128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.30139522650344
Merged-chr4-148082425-1	3.58250498125491	0	1.37621387548247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55517057-2	3.64613400948609	0	1.39975564590637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-67647177-2	2.82465125006009	0	1.50878878560886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79038394-1	1.99261093425902	0	1.43220372922161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135682437-2	2.36344262890452	0	1.46081420152642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34781991-2	4.63987143803623	0	1.40498015114324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153002575-4	16.6410289576472	-2.02512183148827	0.577979383557341	-3.5037959641814	0.000458676646802611	0.0201724950190478	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26931330750396	2.00766992357472
Merged-chr19-42565119-1	4.38788672659086	1.40009088789379	1.09715572236664	1.27610954338706	0.201916798506645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.1600769923993
Merged-chr5-74827888-2	9.46954096955739	-3.56424193038721	1.11562053559901	-3.19485148995886	0.00139902811054676	0.0467710756834016	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38036877487801	0.465515277017237
Merged-chr12-102422275-2	2.83971177160028	0	1.38547193426279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51132608-3	7.3067241469241	2.7116516484833	0.94638634571245	2.86526920085891	0.00416654873293774	0.108531050559243	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.269814341864
Merged-chr11-59941658-4	4.7212339572918	0	1.38736636202978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160176350-5	9.84722088741491	0	1.38759887409649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133907296-6	14.4492151423008	-0.897600983221583	0.443554366020048	-2.02365493834642	0.0430056680898439	0.531990152805179	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69945705739235	2.96833577630368
Merged-chr7-115020237-3	8.22259437844877	0.327827699197071	0.751171059689575	0.436422163724662	0.66253046118364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	2.45851098297781
Merged-chr9-119064509-5	8.77644553934262	0.285265632601204	0.657122545338537	0.434113293821384	0.664206172354738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64928226944878	2.79003281520307
Merged-chr4-133176109-10	21.8056533468044	1.66798716476673	0.694819609626934	2.40060461975492	0.0163680111384816	0.282191156827377	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.94983405387201
Merged-chr12-17522700-4	12.0865188170885	3.69957122526836	0.938857642480603	3.94050285993683	8.13109812295095e-05	0.00493301744269521	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.58296937122787
Merged-chr5-3905673-2	3.81913673129729	0	1.38090704783753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79539861-4	6.57755690552417	0	1.3732824417842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31172466-7	15.9940128568889	-0.093543636912007	0.419101855521119	-0.223200245190261	0.823379661120423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55545008020739	4.35528391343844
Merged-chr10-13268294-2	6.33755448926061	0	1.35964928132762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-17878627-1	3.59256639740922	0	1.39395218424808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66931757-1	3.03814679913848	0	1.40766196697336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14351694-3	5.71557581750121	0	1.37958464815978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95832141-3	9.82578271491865	0	1.34748115282596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55097306-1	3.17876062741018	0	1.37789392458132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126141078-1	2.79643089430544	0	1.47168088851268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115323731-1	5.44024216466711	-1.18698908864268	1.00035726281028	-1.18656517303439	0.235399180045687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80505237968249	1.32509503823899
Merged-chr11-69428940-4	5.74053057851059	0	1.3557337089686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68865994-3	5.30746139870911	0	1.37092814692208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100080978-2	4.11997335487432	0	1.37045106419738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54626339-2	3.08476182750064	0	1.38940626899847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90575561-2	4.00210986224259	0	1.38308323978793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16856864-2	3.41124052858331	0	1.43481184993572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75118251-7	15.486016341561	0.137969843035746	0.500822010240188	0.275486780162832	0.782942280944869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59365278618262	3.3672656158448
Merged-chr17-46637302-3	4.09875825029659	0	1.38713639391908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-13359015-4	6.45796212518141	0	1.37001738561527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106865583-3	6.51682583761292	0	1.36106523206789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107213577-1	6.18654216158527	0	1.36868228040072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24697251-7	18.4188417249611	-0.306739221421584	0.490462739700711	-0.625407796744686	0.531703446260363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40443274967717	4.17337239520492
Merged-chr9-95578636-3	11.4133638867638	0	1.38203789994021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75876100-4	7.3462820381628	0	1.35248081822153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74000696-3	3.51278823928826	0	1.41895679228118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-80331293-2	3.39915208345249	0	1.43972290020061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64447754-2	2.8813222691243	0	1.46487950391483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97108315-4	9.95606729767617	-0.288590984623709	0.718223960265113	-0.401811970345829	0.687822411892648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61327978179526	2.70588307046509
Merged-chr3-107771164-3	5.19282672058764	0	1.3750792071914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73390385-3	4.00319139431058	0	1.36483681119116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43575167-3	3.75812295241328	0	1.42353869614355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80660019-3	5.30751214580885	0	1.37297750470366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164586744-3	5.14269189627448	0	1.38292791647638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31198632-2	5.61911079768208	0	1.3629984974673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88519453-2	3.43687260963513	0	1.38194445515308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34195673-6	14.8626020881787	0.245320192214576	0.446252323253607	0.549734263400482	0.58250165236243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12074653229175	4.34207385707262
Merged-chr7-92653548-4	7.63522387028335	-3.12321534365697	1.11839260689865	-2.79259298066873	0.00522874379150497	0.127544181636413	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0
Merged-chr8-82875389-4	15.9702177452011	2.10535406219657	0.52729606807463	3.99273612997735	6.53152380526416e-05	0.0041093414644717	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57219868772826	5.27032748228546
Merged-chrX-7312759-3	8.46978087528844	0	1.37228751334189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99828683-4	4.50588493434862	0	1.37337279845033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116021485-3	9.49557247143603	0	1.35139241302092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97401574-1	2.00240482191048	0	1.53633236646526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108320646-2	2.88998366009389	0	1.38741479007145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27413513-2	3.58106284632773	0	1.46323594917866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47507213-1	3.72902122834807	-0.0344709531056609	1.31323611387055	-0.0262488616796132	0.979058843307185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.679405493272835
Merged-chr8-31116223-1	4.31801260720689	-4.4974516540447	1.15055530330798	-3.90894000585109	9.27019799507747e-05	0.00552542426331597	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31592518130475	0
Merged-chr3-146328992-2	3.5153499152825	1.81904691546927	1.2938866515904	1.40587810627257	0.159760323569642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chrX-42144180-1	1.45086785787858	0	1.85418838051687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102052399-1	3.75335569819254	0	1.37979805274494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76160090-2	5.53279057770638	0	1.43702694679056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62448541-1	2.67254869033458	0	1.44240615830415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144977250-2	2.51886927336346	0	1.62506352744672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133111920-1	3.06420280006629	0	1.42659378235575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38015044-1	2.44720030587557	0	1.40225591340655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64430256-1	1.56431585751372	0	1.54431718081684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192081232-1	3.01727139496176	0	1.38910855893525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133589411-1	3.64802462085622	-1.23182611140102	1.08074627554192	-1.13979214111411	0.254372908636112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54080967572873	2.53871193016083
Merged-chrX-96316713-1	2.10114767532	0	1.50999304326453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83687257-2	4.84497667664595	0	1.38468650123266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84248348-1	3.00793400861571	1.7784351501194	1.3847664424958	1.28428527406692	0.199042157449698	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr2-158080040-1	2.17425773473457	0	1.51862188884178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98889347-1	3.25667177025203	0	1.42949658830384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76130039-2	6.65115060127229	-1.19724372601366	0.678800200634169	-1.76376454352126	0.077771629330806	0.780586176252539	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32748024243183	2.09570478303064
Merged-chr13-93899832-1	3.03330406457814	-2.92105757069005	1.30791919235424	-2.23336241853916	0.0255250543866635	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6995072319729	0
Merged-chr8-83198542-1	2.69254644769711	0.9367278114028	1.15719107661955	0.809484129569357	0.418236727916939	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	1.56277881816808
Merged-chr8-40855634-1	2.29283956603328	0.292736664347197	1.27663128315606	0.229304003598831	0.81863264195662	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	1.70340695421451
Merged-chr10-96605360-4	8.08373684231985	0	1.40288716131582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137948720-1	6.12181698928096	-0.502406526140711	0.771845732741622	-0.650915726846278	0.515100888778426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31387409893957	2.12382511851675
Merged-chr19-9988367-1	7.9498563581857	0	1.40329716668142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8738869-1	2.42591836610555	0	1.47340985618747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103695958-1	2.06834608496596	0	1.45358087274313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24466994-2	3.00277955961821	0	1.45518948416069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112532899-1	3.87669087351222	0	1.43219947483752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39571150-2	1.98340021801317	0	1.60901447084993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3238934-3	9.33301150258905	0	1.37298343737029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-6922372-1	2.73030824798304	0	1.40527676917096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87907479-1	2.05735924649116	0	1.50819895332386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70565616-1	3.71372706355643	1.81166643240471	1.31272093200593	1.3800849733053	0.167560483374434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr4-6924969-1	2.51080058475719	0	1.43795195624185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32211498-5	8.23189049593875	0	1.37591920108439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83041740-3	6.81095333182867	0	1.36675471202993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57324235-2	2.95708429697063	0	1.44142845234242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105262512-6	12.0836797819139	-1.10430830460353	0.73289017045395	-1.50678553093368	0.131865639499539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12643658929939	1.2636608194585
Merged-chr8-44938145-2	4.52627909228887	0	1.39990287365051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28899081-3	4.58555375412716	0	1.4037827227422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145264298-3	11.0429280889204	-0.786254821480013	0.558538824805567	-1.4076994947553	0.159220071508866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39529352471637	3.6196589487311
Merged-chr6-117553598-3	5.24611746386852	0	1.36512463556668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101938728-2	5.10930165248699	1.80158205866787	1.27464806449749	1.41339567277194	0.157539417230849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr2-152197442-3	4.00583204656359	0	1.39011944815703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41243811-2	6.95099814397096	0.956670493290009	0.901257615952978	1.06148394904651	0.288470023575303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.67273088548657
Merged-chr4-150546932-2	8.75246315177809	-0.859762666281874	0.543553219028792	-1.58174514690222	0.113707761768278	0.984398824966051	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98660594295366	3.28826295178679
Merged-chr8-71308163-4	10.0998421917591	-0.11553184860291	0.615567375243836	-0.187683514834011	0.851124753874984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20642815764035	2.32865955880796
Merged-chr5-73180197-2	7.78657740714968	1.62807867331799	0.681099020780227	2.39037001030035	0.0168314061879475	0.287264806584189	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52658010023757	4.46406968394691
Merged-chr8-25990254-4	10.0481839849398	2.49956537222839	1.12900832673229	2.2139476858093	0.0268323778628768	0.394104628005436	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.93957782847288
Merged-chr2-163987639-3	5.66123422745398	0	1.37930797569102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8594891-7	17.7305822126099	0.277960218077813	0.407757016921077	0.68168101723094	0.495440673261443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62297216182801	4.88729292207899
Merged-chr18-50074458-3	7.34391363001166	-1.56870058468886	0.853779678130417	-1.83735994762016	0.0661567754641749	0.708055947520591	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97276763629183	2.26765163656058
Merged-chr3-126662075-2	8.18568996690912	-2.00874366592433	0.944156330583611	-2.12755409338056	0.0333740718432877	0.453819095401908	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94638090051813	1.04648494364547
Merged-chr2-18688921-2	4.7973557622607	0	1.37743458972588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54443828-4	5.01375500069615	0	1.39572505315276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114376700-3	5.34298520317345	0	1.3700030131843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5417384-1	3.07894812125476	0	1.4338612277425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23874065-1	8.50659111842358	-0.0615476906627005	0.582097075848221	-0.105734409630927	0.915793078430892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60450854562673	3.58756318986276
Merged-chr19-21032744-1	6.67726350511343	1.52279594297392	0.786785559131936	1.93546503910675	0.0529332548303883	0.613517867659931	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	3.06645294813614
Merged-chr3-14667324-3	3.44771812528764	0	1.39440683320536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-34114845-3	3.37509685478489	0	1.40350010669044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95838782-5	9.02499274735423	0	1.36193918643764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45691741-4	5.86520408246327	-0.512251632945899	1.15466875690284	-0.443635137682175	0.657306397222515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.577068348605183
Merged-chr1-189973180-2	5.59351560734539	-1.73687342544992	0.813212263435184	-2.13581804351178	0.0326942478296257	0.447889772623644	C57BL6J_F1_Control-BALBCJ_F1_Control	3.205015762469	0.788686275880602
Merged-chr8-125240793-3	7.58817640060847	-0.0502637699937279	1.11379753414959	-0.0451282827018516	0.964005058045685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.904676873936758
Merged-chr17-87246101-8	20.7454844710526	-0.695168096037674	0.462290410970501	-1.5037476000817	0.132646367906792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.18569505680462	4.59045050181716
Merged-chrUn_JH584304-42388-1	1.26050056329306	0	2.27646029539088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47853865-1	5.2510489512627	2.52461455515001	1.24719080436159	2.02424083493969	0.0429453778952735	0.53152727618606	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.88866493597531
Merged-chr2-116977169-2	5.49414584712473	0	1.37000307696615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119126908-4	14.0012895531793	0.232555174891692	0.597444318053425	0.389249956630931	0.697091251597981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49523235442522	3.6638068565821
Merged-chr17-33818253-4	12.6984104155395	-1.02300317442954	0.52091929464407	-1.96384197119926	0.0495484210672201	0.586287031082503	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11460610860979	3.29891859418089
Merged-chr17-55736867-4	5.53943575472161	0	1.3734468302044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80961004-3	4.62595310297106	0	1.36779090590689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21986180-4	6.18391972044532	0	1.3654677130487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34612901-2	3.3362692106297	0	1.41514008265705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4905295-1	3.26231118816349	0	1.42168656107191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36725270-2	3.49528779919659	0	1.42223861913081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110117005-1	3.63470020058469	0	1.41343796263345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46135454-3	5.39534763412287	0	1.36973215947443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-15064333-2	2.27261874979468	0	1.44445556493789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45801444-2	4.13852119934847	-2.35045791778644	0.904607716241571	-2.59831734307113	0.00936818711697441	0.191950728794426	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9258761899202	1.81334941981647
Merged-chr14-32169064-1	3.89584781121473	0	1.4458258086574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108057035-1	3.03129987951022	-1.16053979976652	1.29873149253566	-0.893594870407478	0.371538691904828	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.303163067301871
Merged-chr6-54927075-2	3.40333528599495	0	1.43107874635903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169859903-1	3.4946000918355	0	1.45359258012276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40894101-2	2.47353655191489	0.617942253898232	1.43375502782519	0.430995701431342	0.666471496038623	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr2-3657593-2	4.37711778290488	0	1.37618872939798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172530678-2	3.36068640005855	0	1.43689031126582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87274585-5	12.7794568617389	0.796926983523306	0.531579265450762	1.499168675903	0.133829879029609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6793759824031	4.56146174172743
Merged-chr6-97971586-4	7.99831438886933	-0.0345856793894472	1.2656548995187	-0.0273263109893537	0.978199471566512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.600815099743027
Merged-chr8-111525387-6	14.416391741444	0.585207270386258	0.437601938772046	1.33730502206733	0.181123092378511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62338277974788	4.19111538139244
Merged-chr5-92489166-3	4.04092789565773	0	1.37921653051132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-51888583-4	5.9275900150957	0	1.37484179149829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161180827-4	9.63249893134061	-0.122142283451677	0.730916607154809	-0.167108370853868	0.86728477964267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46935039169561	2.87577977459916
Merged-chr4-108454883-3	8.76502548434025	0.0257567824390834	0.626516660253949	0.0411110894140361	0.967207334004759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66223990676383	2.67796938213669
Merged-chr4-137739361-6	12.6137423936163	0.452227888686254	0.462095295021416	0.978646382160839	0.327754733285693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99754678527895	4.3286420262402
Merged-chr7-125878187-2	8.54189993734375	-0.618805209902061	0.657997098028384	-0.94043759730285	0.346993144550008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90468819810421	2.35104930272392
Merged-chr7-98869263-2	3.15234743501705	0	1.3947576535302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33663639-1	8.13913273987899	1.30771781981854	0.656616262423023	1.99160132737627	0.0464148176285985	0.561304354054057	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59989026816624	4.73474316161216
Merged-chr10-93803029-1	2.8500920381289	-1.93250546122994	1.471684874205	-1.31312449771142	0.189141000215664	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr8-45358618-1	3.10727902657186	0	1.42236612879735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20730058-3	6.4892214757747	2.73415359039735	1.15748170154732	2.36215707491733	0.0181689421747674	0.300744679560957	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.44790810950236
Merged-chr5-121916887-3	8.19748361656683	-0.833461410043871	0.710305376381864	-1.17338462829795	0.240641598678315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13986413283586	2.69125151366292
Merged-chr14-62893461-5	12.6462665728417	-0.555521812342092	0.590982906608053	-0.939996412976663	0.347219400617388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12719249402971	2.22425996312461
Merged-chr5-36751829-4	6.10148613434037	0	1.34968543010281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-73149-1	1.38756580813033	0	2.25136747120675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31447398-1	3.15102403583	0	1.38691862139789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72437585-2	3.20603059103368	0	1.39377602817524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90977104-7	14.3102506386637	0.285697028017416	0.447507720974675	0.638418097893743	0.523201553094529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43655308195336	4.69781394291307
Merged-chr16-30604256-4	5.55913802669019	0	1.35063937181551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121451324-5	9.5313482872038	-1.48348002496206	0.709864181415297	-2.08980825318494	0.0366350276841332	0.480640538736569	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26702399068743	1.38572824442771
Merged-chr14-121931192-5	9.30824290248165	0.0964714569240974	0.58551875896842	0.164762367467206	0.869131025562343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91991443973346	3.10056221433138
Merged-chr8-3754477-3	6.26749434005518	0	1.3989583604124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79877374-2	4.48054474037878	-1.27739784519884	1.38759112856366	-0.920586633125218	0.357266283557645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr9-7554553-2	3.93036690454991	0	1.38850535108457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11005958-2	2.56341151592785	0	1.60204144314729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96993327-2	3.80343167332098	0	1.40225441916982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131701148-2	4.16945786804446	0	1.41533600559546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49004540-3	4.76306473985494	0	1.40224342354336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12124748-4	5.20506236153642	0	1.40987697830388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23234729-4	5.01314203400485	0	1.39585273236425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118575151-4	5.69138227263282	-0.0351806790858952	1.33180593264486	-0.0264157699132855	0.978925715967263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr16-91640399-3	4.35748725286846	0	1.38420662230068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98238648-2	3.67668997359435	0	1.39892010392563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125400952-1	2.536696267446	-2.52532599280419	1.44836699195206	-1.74356776068242	0.0812344890602733	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33710883062617	1.0754104773304
Merged-chr8-13632563-1	2.97738596880474	0	1.47375934355041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123201235-2	5.22998839467899	-0.601192553331142	0.894011273356799	-0.672466412055194	0.501286815914394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2099105260436	3.4676497416282
Merged-chr1-144296464-2	3.79687103617873	0	1.48412287419614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10923046-1	6.77727004135969	0.890461504816746	0.621319336323544	1.43317848449038	0.151806836693775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83247173307855	3.86522440330372
Merged-chr9-116126713-1	1.58747070309562	0	1.63940079038739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118101396-2	3.34204958194101	0	1.42287078618838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192532406-1	3.30995140092302	0	1.44409665496063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3513502-1	3.28987630124201	-0.999581707202757	1.31203716848269	-0.761854718154613	0.446146718356677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961371261847668	1.06702908365212
Merged-chr5-64233511-3	4.69757713162142	0	1.43007711742593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37401860-1	1.76683002210952	0	1.48564596951275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24114706-1	2.46969738505905	0	1.55117098669828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76325221-2	4.04104771505449	0	1.38767557534355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24307672-1	2.33444668757295	0	1.46567503989569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102396103-2	2.47128254215894	0	1.40260528793816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35741370-2	3.74509682799154	0	2.10927967776404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33753080-2	2.47511344132197	0	1.44013771724631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104144554-2	3.29527515546952	0	1.51271897039173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74342326-1	6.82314800447989	0.763062680466719	0.715759859039591	1.06608755831963	0.286384063286981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77284030825146	3.24040598717558
Merged-chr19-44750902-1	2.31011296344271	0	1.44138595749167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-87171275-2	7.11429844471977	1.09834337912241	0.766343755610415	1.43322545669801	0.151793416899482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.44099431680909
Merged-chr10-88740067-1	2.12964723305666	0	1.43801486379671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79139044-1	2.696048670699	0	1.45527912904578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105978771-1	2.20521549691475	0	1.39713425339109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99335198-6	11.2447307121356	0	1.35084317120187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41437593-2	3.67315437579744	0	1.40901211088805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97386367-1	1.64205884401281	0	1.48376149828238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61916245-1	1.58340607858296	0	1.56389430897722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101936050-1	2.7464677418153	0	1.42227273172172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137948336-4	5.2405779300402	0	1.38136377881622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37504745-1	2.11762471420414	0	1.49819919363444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157554375-3	10.3880197009128	0.486936548409416	0.577819522832491	0.842713908354008	0.399388466693231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82333931509604	3.83811902827407
Merged-chr13-80862451-2	4.52821820020709	0	1.37082737577249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57557719-2	6.61766476462812	-3.01077935863409	1.15228505930682	-2.61287719936704	0.00897835559022754	0.186922417284251	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54208616949709	0.716426531808663
Merged-chr14-74929008-3	4.1843061546725	0	1.40505251214654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129255176-2	3.56084171148813	0	1.39238918563672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80024783-4	12.4138355522084	-1.22462977935834	0.591102762051818	-2.07177137035774	0.0382867678337457	0.494236621390307	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93178510513161	2.14745601348939
Merged-chr10-21907271-4	6.2304718001957	0	1.3558425529569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29043089-6	17.4343120628094	-0.904906598680787	0.540264776351674	-1.67493169699399	0.0939476337040944	0.875218409686524	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84902670068461	2.86119029313837
Merged-chr6-124360777-4	6.76208340895164	0	1.38676624316905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145304786-5	16.1154053800154	0.705772133940746	0.533497022760339	1.32291672461272	0.185863072841704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66723631034282	5.23152501574382
Merged-chr12-105722864-2	3.33765949929683	1.21929637976464	1.37675193392273	0.885632589082726	0.375815544480949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr2-144237514-2	4.43711794003363	0	1.37955495796428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115492599-4	6.94386281500652	1.07891143684451	0.830122633268756	1.29970126533728	0.193703376530712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	2.93569299805321
Merged-chr3-27616511-2	5.34547081078337	0	1.37092523525209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121197584-8	15.7415151523457	-0.693843528578314	0.433410497787759	-1.60089229984016	0.109400775376118	0.962852090055961	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1747963068604	3.6259811584217
Merged-chr1-106401071-8	20.2997574118719	0.509193972753293	0.431895127575385	1.17897596023335	0.238407748499409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93460653114601	4.42212307645747
Merged-chr1-171118440-3	4.64209897233228	0	1.36679030095991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44170238-4	5.25243149691617	0	1.38963299391798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51907400-3	6.48775989712204	0.911630624535827	0.907845945376603	1.00416885615726	0.315297230857901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.23869582718247
Merged-chr8-88207462-1	5.40801815905315	0	1.3692277932938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76903901-1	3.40601880712582	0	1.40963688189442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41013560-1	5.5830254622972	1.37840609167258	0.767671611399741	1.79556736396602	0.0725633502143418	0.748716609675225	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	2.9952776738845
Merged-chr2-62630669-2	3.81103376016382	0	1.40931259183003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77008442-3	9.20509708660832	1.14643347707375	0.771005080839501	1.48693375123478	0.137032309010643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17564474993106	2.41286115835884
Merged-chr5-100559565-5	12.3789971297648	1.31368351815956	0.694639328368396	1.89117354072826	0.0586011821503755	0.65599292844157	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00110701584433	3.00209617016791
Merged-chr7-79997276-4	5.64837118643026	0	1.36620625238417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126570772-2	5.11755669550641	-1.33845616524815	1.37303101978035	-0.974818591835067	0.329650253161976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr8-72183674-2	7.72611962280536	0.132050357206817	0.846277199294267	0.156036765869313	0.876004041169328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58458601743443	1.62518823153097
Merged-chr16-52932145-3	6.28881949253778	0	1.382297108939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80919121-5	11.0294074730578	-0.174805166650442	0.648073990436369	-0.269730261096792	0.787367778126994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4587860866611	2.34377460879188
Merged-chr4-43052849-2	3.39526736386419	0	1.39053827602451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-137900440-1	2.32388313016033	0	1.41817563424154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183273357-4	5.05466123534507	0	1.36546395667362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90362930-1	2.0787579479036	0	1.56627563190768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43574195-2	4.20947426889057	0	1.38756686377783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70937694-1	3.37118350982141	-0.623795828566882	1.26436435050664	-0.493367143985768	0.621753193448042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20192767614962	1.51226750748471
Merged-chr1-14740210-2	2.62883142598795	0	1.46163628140066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139366734-1	2.40570867740194	0	1.43487983511199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68884504-2	4.06348389725522	2.17331499812689	1.27193580610676	1.70866720450235	0.0875126122709208	0.83766474563039	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr2-174335879-2	3.95370566720696	0	1.36921325958166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20847154-1	2.18185852728101	0	1.44152758588083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3376233-2	5.37331386826753	0	1.3715675816789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131253773-2	3.21625071259822	0	1.45806909787024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-22021064-2	2.23565213461669	0	1.53100704578948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83504676-1	3.70938822152149	-0.188323785106436	0.902419349885756	-0.208687662925531	0.834692071659912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1552264446993	2.00766992357472
Merged-chr12-46857002-2	2.52400804883356	0	1.4328450209209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126682476-3	5.49619936386738	0	1.41030161944165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126707876-1	3.0522097195691	-1.52165426582032	1.30820562319733	-1.16316138597639	0.244764029990755	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0.303163067301871
Merged-chr2-33871534-1	2.73264764962498	0	1.4261609740108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121903988-1	5.08712174402522	0.539590794902197	1.03091390154372	0.523410145206304	0.600688865684247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	1.82070600302968
Merged-chr4-43479684-4	5.82086082300507	0	1.37677794468087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96238444-2	2.50446633349805	0	1.46377418575293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29389336-5	14.513035293484	2.00432731834718	0.561642966081106	3.56868587233004	0.0003587762786589	0.0167261747269461	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12000018760685	4.7419315446413
Merged-chr7-127849325-3	5.31145499613769	0	1.35867197744326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51422240-3	6.72723068665135	0	1.3614902511584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24625255-3	5.25763832275482	0	1.35699338003998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61643432-5	13.2245050190887	-0.0124777999887111	0.449281266054	-0.0277728027662995	0.977843357841021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04607129667571	4.09716322764465
Merged-chr11-102573009-3	4.09550888099186	0	1.37689250699581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48615917-4	15.3458522630201	0	1.37496868615591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75844451-2	4.34945628755327	1.50549222598146	1.23408443807706	1.21992643252783	0.222492764569222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02674429890598
Merged-chr15-96666906-3	4.59925077822805	0	1.35938037426523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3818171-3	7.29089970637488	0	1.4121290653054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57581810-3	6.48667982901224	0	1.38008744973918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167175532-4	7.16898999305762	0	1.34820021814551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69462130-4	10.3549335900639	-0.154670170452234	0.639723022593463	-0.241776776807555	0.808953134546604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55101630593484	3.02061198026213
Merged-chr8-18935684-4	6.10977239085293	0	1.36919549975055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145957656-4	10.4400920598666	0.521936232006992	0.545728930705254	0.956401983916239	0.338869182802088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39774116377654	3.90158846698594
Merged-chr5-32722364-2	7.66409761964386	-4.40013873162845	1.00387855130665	-4.38313850405632	1.16981687326567e-05	0.00100141851045431	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4026447925497	0.465515277017237
Merged-chr1-60015635-4	10.6382238128855	-0.857348119833548	0.495932210594468	-1.72876070865785	0.0838519309913959	0.817304485702221	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73438114671965	3.92712456883684
Merged-chr6-88500292-3	4.25566934444162	0	1.37764203895287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36253015-3	5.0247769541443	0	1.37532935242333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9249817-4	7.30469706474167	0	1.36303031422179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159676313-1	3.84456954507705	0	1.39459997302543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129546077-1	2.60532168393889	-1.91262781260221	1.32618549136357	-1.44220233523718	0.149245302008929	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr15-4043279-2	3.71516810282704	0	1.38382848785565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116726298-3	4.58362970749856	0	1.39883902207821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41069136-4	9.6225578554838	0.582245927660999	0.744847941242801	0.781697706903109	0.434392249631532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90612664010796	2.92671888010367
Merged-chr3-67557917-4	9.24363445157525	1.83433191704253	0.835319931270608	2.19596330504448	0.028094569958305	0.406136503387282	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29072512625674	2.7139288186946
Merged-chr15-102224652-3	5.63679283268437	0	1.37023457057917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74249852-3	6.82121697526275	0	1.37076432549508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18646594-2	3.08268637326334	0	1.38966455766197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81074849-2	4.09714063337474	-0.254491211423916	1.09109806046167	-0.233243207596058	0.815572556119866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.18984215491549
Merged-chr6-117874938-3	9.9131534215757	0	1.35946707806172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112197066-4	8.29673242773494	-0.858008814483913	0.727074393205696	-1.18008393983031	0.237966831490771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39250117777372	1.97656658922368
Merged-chr2-131545587-2	5.07272469045018	0	1.37697068024584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99353078-4	6.48726091675159	0	1.379001469686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70199977-2	5.30942832155932	0	1.38353316076205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35232157-2	3.55013130054727	0	1.41077321359542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112449343-3	5.18597107359477	0	1.36851270813508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115475944-4	10.7721819335597	1.37119821010532	0.525531032968939	2.60916696462026	0.00907629453337825	0.188168685941994	C57BL6J_F1_Control-BALBCJ_F1_Control	2.522943325831	4.15431113949325
Merged-chr4-99116016-5	10.6964498998918	1.77309262173458	0.809023887668806	2.1916443367868	0.0284051978890781	0.409352638402013	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	3.00207686370985
Merged-chr14-54754219-7	21.9434375462686	-0.140981048353584	0.357445452569766	-0.394412762395033	0.69327632286219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51561221397802	4.35707190697579
Merged-chr7-98980498-1	3.76535400863346	0.132580099879965	1.02334714789849	0.129555351917702	0.896918229444556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31205403547308	2.70756855903761
Merged-chr3-87181462-1	2.20228264711914	-2.18343152895755	1.40081867005385	-1.55868248734407	0.119071548741248	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0
Merged-chr12-112844039-2	3.79967158981187	0	1.3980443473279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34314981-1	1.93026922642345	1.40875205191951	1.67809769882214	0.83949346507555	0.401192454800567	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.4660888007465
Merged-chr1-131283211-2	3.24708754544692	0	1.38659685727073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55080283-4	5.45302491165776	0	1.35996116581318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14893608-1	2.83694318638425	0	1.41680122513292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10345045-1	4.12457107250749	0	1.40523210714354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12313642-2	7.27362844634886	0.297320903327841	0.626246972557693	0.474766212623009	0.634953617935715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48214023357846	3.83491833758521
Merged-chr7-107215910-1	4.32591942547787	-2.87788838695977	1.07306141207468	-2.68194192296563	0.00731961658498211	0.16141461985519	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10140649903936	0.662147012823607
Merged-chr1-40239724-2	2.78172725687126	0	1.49660276736006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63674825-2	2.44226787557315	0	1.49332972546137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118240624-2	3.08253286223543	0	1.41608103818664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5174610-1	3.42007240767295	0	1.40830672346253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109348288-1	4.74495440268576	-0.113470738412355	0.792773954365324	-0.143131264325146	0.886186513782549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18439272780961	2.34737280014568
Merged-chr19-41760892-2	3.84492362648102	0	1.43687334443674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125604317-3	7.6130824440625	0	1.35876149251224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77249872-1	1.24230822543516	0	1.53743643181959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-63484902-2	3.6894476411326	-0.035253083628916	1.46718734904459	-0.0240276633054888	0.980830542946773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr1-57393116-1	2.62340140966905	0	1.46164106038353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118873528-1	5.34272568030538	-0.844474457342547	1.03240254661736	-0.817970141694679	0.413374236792458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58572782874502	1.7259685848666
Merged-chr12-119146748-2	2.35297895115891	0	1.58853176222134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45819153-1	2.15228509324847	0	1.46406048525609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47049369-1	3.10888260312225	-1.65422191279167	1.3095561191492	-1.26319283962141	0.206519885514588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.465515277017237
Merged-chr13-119817712-2	3.28141881166781	0	1.37319252525677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23890462-1	2.2343195934495	0	1.61969580060691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17549806-2	3.24897641422537	-0.535608601617481	1.31173214680875	-0.408321624899213	0.683037565096059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.723581231604105
Merged-chr8-27137155-3	4.84926459882612	0	1.38905768255086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22743037-1	1.91867032570263	0	1.48149391534445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60550118-1	1.66057819550217	0	1.7701082778842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66192647-1	2.09340980046888	0	1.42129515789589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120865248-1	3.06595291856066	0	1.42943661003447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77963016-1	4.01892525938121	0.160255731978624	1.00033100521642	0.1602027040479	0.872721399385121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	1.33501937324953
Merged-chr17-83862367-2	7.14543108692355	0	1.35754835777346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83407058-1	3.241482297407	-4.20264958469712	1.28044421128399	-3.28218093975592	0.00103007484263417	0.0366932099415142	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55449967496659	0
Merged-chr4-19741165-3	4.34419884644437	0	1.3952473168369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61557194-2	3.15704542298567	0	1.41302084828989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60627629-1	4.48394309955087	0	1.37931554497383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53422442-1	2.75209459087791	0	1.41097542080116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115520456-1	4.60496255579531	0.329852154415361	0.692515902795067	0.476309862465314	0.633853640135744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55259566091677	3.73657455918325
Merged-chr7-99215830-2	3.99171173536755	0.814085171813143	1.18910312638365	0.684621168467508	0.493583005575747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.44790810950236
Merged-chr13-58534686-2	4.44662233922155	0	1.38055597498331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78096834-3	4.36929564642269	0	1.37791990929535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3920993-2	3.80820000041842	0	1.40394820022565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45251545-1	4.29779774806494	0.91728045941453	1.10787317101917	0.827965225090423	0.407690194153979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.43881745552618
Merged-chr5-92444351-2	2.687139132638	0	1.4018563705595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88245951-2	4.86767534369634	0	1.3824774549785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79171761-4	10.7373128620167	1.42795732931879	0.617010004156167	2.31431795222135	0.0206502877636854	0.3273633690715	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	3.59485575996222
Merged-chr2-35162824-2	4.13484512713981	0	1.42707069764943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116732736-2	4.18717645967322	0	1.42460314490206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29655686-4	5.60782076310508	0	1.36761396899459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48054417-2	9.5579801936331	-3.72710149518401	1.11163842021359	-3.35280017981736	0.000799984394707946	0.0302619009825534	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74879361603124	0
Merged-chr13-51696679-1	2.77011484562982	0	1.38339596570711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48410691-3	6.53010535588635	0.271268352395977	1.01325865095948	0.267718762765169	0.788915806249929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.40024388691264
Merged-chr10-80748834-2	4.48570367681586	0	1.36429011021657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-40712564-3	10.4268386534886	1.27025440836068	0.643361107562468	1.974403477968	0.0483358828980019	0.576706395851835	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11444950341994	4.76381962401141
Merged-chr5-96968752-5	11.6301149791598	0.76904824099162	0.476602210512679	1.61360611434084	0.106612889768254	0.949068655373767	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5243094440583	4.01367671752067
Merged-chr10-95973461-4	4.62268491917322	0	1.41456175365584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62011911-4	4.81441089435291	0	1.37008760286552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32566337-3	10.7782048916252	-2.08431216020487	0.833250267586387	-2.50142393142259	0.0123695012174339	0.233625451173492	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1143152953673	1.06702908365212
Merged-chr18-83934448-4	5.15708302388002	0	1.38902755847456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163364816-1	1.84454246373709	0	1.65795795932766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71216264-4	8.61546036217585	-0.911044407197823	0.754198836096979	-1.20796315718615	0.227061434223663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81960882153758	1.74224738577465
Merged-chr7-104398259-1	5.07084113096625	-0.551712759080245	0.989260579729328	-0.55770215692937	0.577047784574465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1690188381782	1.15589752119199
Merged-chr7-96544126-1	4.16927370551835	-0.918601382407064	1.51559633017653	-0.60609897511435	0.544449031518452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84492601506134	2.04620498642205
Merged-chr15-84126636-3	4.64763844874704	0	1.3576956489191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5840619-2	4.1183859318979	0	1.41215676313003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114852067-4	11.6793546464002	-1.52741562312343	0.617046622373767	-2.47536501739121	0.0133100064320604	0.245593564032712	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79043338640697	3.05788296014251
Merged-chr1-172357722-7	21.0372545234191	-0.547551716809452	0.425639578404516	-1.28642105807434	0.198296153074262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39121416734527	3.83740162341801
Merged-chr19-9986533-7	27.2740501619133	0.0406518381378401	0.495445066146788	0.0820511514101868	0.934606037604691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99114209769268	2.98091398270672
Merged-chr14-77081136-2	6.01458540089813	-1.18221406225884	0.938339071340038	-1.25990071006052	0.207705182566915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33904733505278	1.02674429890598
Merged-chr6-103525812-2	3.81005159981475	0	1.40883694727502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34255214-3	10.7188911814463	-0.69218489955484	0.709423114913421	-0.975701080221097	0.329212616774377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30992332074145	2.23795018088832
Merged-chr13-89385852-3	6.5225524925908	0.625399422129618	1.35612213593466	0.461167475670311	0.644678454301464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr5-99270018-4	13.849534934436	-0.436793974371348	0.559469425223461	-0.780728945459147	0.434961932534435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67049660463988	4.1109234141505
Merged-chr19-55828003-1	4.05116941831071	0	1.37416101270817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27436924-4	11.2079990358562	-0.74893608791991	0.780119559383569	-0.960027317494385	0.337041466528203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62370083362539	3.25398189254194
Merged-chr14-25832500-4	6.53112154209583	0	1.35319850998065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60808684-5	26.6048468808423	0.42912164714778	0.400823872300528	1.07059902566391	0.284349761766985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.19831108700737	5.60794951387773
Merged-chr15-84803864-3	9.07839909537553	-0.273885845448138	0.745904756997217	-0.367186082242883	0.713480220129381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77159043639261	2.7488727492065
Merged-chr15-30467405-2	2.61933965944686	0	1.45909422389058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54973976-2	3.15829224643203	0	1.40775536439535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42829682-2	4.59968694441137	0	1.36724151825836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42903221-1	2.47593360765595	0	1.43682271786542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-147606914-2	6.50046921076169	-0.105934780227918	0.731453376655853	-0.14482779574037	0.884846835764408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.702840391643	3.16888659213919
Merged-chr3-152261453-2	3.70064583738822	0	1.39812947322118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101999723-1	4.70706197654959	-0.646353670622916	1.01962584476996	-0.633912600331098	0.526137861946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	1.13341594473881
Merged-chr9-66915992-2	2.57187566704343	0	1.46059175883877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35543181-1	3.94042612035315	0	1.44104822313517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67142362-2	3.18326819204187	0	1.43766982285574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100215503-2	3.23055123494741	0	1.41660907436167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61558886-3	4.28999457743866	0	1.38678135346024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82932135-2	5.61188761757327	-0.0368679022694842	1.01305242382861	-0.0363928868855079	0.970969085867123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	1.27673210875742
Merged-chr9-104252629-2	3.2356059159727	0	1.4193372607232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45608271-1	2.338681249922	0	1.43222505247547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8568003-2	3.81344135071868	-1.89815227527104	1.31796883017328	-1.44021029315351	0.149807911952191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr8-73917646-2	3.51441835111605	0	1.4540486615206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33871056-2	2.71311969856699	0	1.41879673099048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13291766-2	3.78057896942349	-0.157757728802375	1.2730924818363	-0.123916943233241	0.901381037585807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.577068348605183
Merged-chr7-83615991-2	3.87026078037205	0	1.37500204051319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-113660342-2	2.10236854525705	0	1.46604525292152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97900022-6	14.0152971858423	0.228146742251661	0.529281190891407	0.431050160440087	0.666431898516276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71775650488138	3.831249251664
Merged-chr13-75992880-3	8.73857663879438	1.98648834273507	0.786257839354423	2.52651006235579	0.0115202088221904	0.221281636524893	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	3.32236876138829
Merged-chr18-6055808-3	6.15993228095294	0.651804257960414	0.756518652681249	0.861583856062627	0.388916557952652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	2.55497489151277
Merged-chr5-136458262-3	8.54761533205539	0.109517695572254	0.697495814049852	0.157015559615139	0.875232585406861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04937768295532	2.24992080272587
Merged-chr2-53200705-4	5.27918471081486	0	1.35527511284765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119950304-5	11.0197820033174	-1.30113506606422	0.753595876606016	-1.72656871733981	0.0842451481602545	0.81864176060838	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48853090112376	1.57989517605929
Merged-chr7-99531941-5	8.80774697934392	0	1.35282382416594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116648710-2	3.94627360776132	0	1.39518991799244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19276381-3	4.69993870106853	0	1.356198056487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121309425-2	5.92198298415509	2.68218781262889	1.20122482862577	2.2328774336919	0.0255570280975993	0.380409225180011	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.897114879832661
Merged-chr1-131481630-2	3.7239932206694	0	1.38441961457177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33172978-2	5.15072427018799	0	1.4183801585486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10759744-3	4.15199044103127	0	1.4027931811395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5011694-3	3.48474919306312	0	1.41470590247816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41565872-3	2.9783663715522	0	1.52988122317734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111920201-3	3.45744694118707	0	1.42315548153075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13301320-3	5.17082234228028	0	1.36719343958149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22061843-2	4.57503552931304	0	1.37077389771563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75803222-2	9.19485167448727	5.31032639516465	1.03745453585508	5.11861118886316	3.07793758121834e-07	4.54711183419484e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	0	4.11851625455166
Merged-chr1-121427115-7	20.0780706686621	0.531073697721918	0.485430194539638	1.09402691405623	0.273943174374312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89823853533638	4.55498966152592
Merged-chr12-40657092-3	6.0084738225821	0	1.36439475205014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72235207-1	2.45409210518375	0	1.46942926009885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149415964-2	3.46213009530509	0	1.43319379404665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88505932-3	10.6827849683954	2.14567940235788	0.645238635217383	3.32540440892072	0.000882903697616821	0.0326044579475222	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	4.22057072712803
Merged-chr4-141641854-3	9.71311775123145	0.757765321543921	0.793686411671022	0.954741457584648	0.339708459023255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	1.7960770137454
Merged-chr19-40697787-3	6.60237676186905	-1.05738364803003	0.874033743734764	-1.20977440014136	0.226365471951242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07669635013709	1.21849460895724
Merged-chr4-138922202-4	11.841778494309	0.53175778205018	0.529720002587163	1.00384689921669	0.31545241470895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52356215506686	4.1154425069743
Merged-chr13-100873607-5	7.70248979221985	0	1.35746703893022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148746921-3	6.76799523148232	0	1.36005418625107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82152169-2	6.90134741711703	0.617313682103907	0.830534890183495	0.743272425277065	0.45731676261035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21444166002597	1.71483396990367
Merged-chr3-58502103-6	14.9134970646892	-0.74170542620786	0.550395359530845	-1.34758662725661	0.17779137407112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15054708799377	3.25589192713742
Merged-chr16-65423064-4	13.0492059046718	0.0469391240014861	0.469884135513203	0.0998951027580866	0.920427604337377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19507807761741	3.97837807224515
Merged-chr9-94734529-3	4.75562994672814	0	1.39080446988428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104185910-2	11.8408469739639	-0.0588664693050896	0.521705017641947	-0.11283477696105	0.910161546367936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88800985253908	3.78257165420163
Merged-chr11-54975726-3	4.31914919897484	0	1.3698752937388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100601233-4	14.2254600270262	0.609531384347111	0.72465421157462	0.841134122470142	0.40027280102413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76302217368042	2.55802334106756
Merged-chr12-104273723-4	9.19057917816593	-2.53876326939159	0.873685302483499	-2.90580974885925	0.00366304094861071	0.0987694657368698	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81739003606695	1.44790810950236
Merged-chr14-102942476-3	5.49408754489506	0	1.36857976304049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138162874-2	4.66779345063124	0	1.42384669899011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-56524896-1	1.59666294709668	0	1.51833768480539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77397143-1	1.23442607811574	0	1.60117521870187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62555539-1	2.52920060052899	0	1.42388920360698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61113369-2	4.42296793300256	2.08661757949483	1.22050810454385	1.70963025294672	0.0873342676503115	0.836546864353002	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.36707655402198
Merged-chr18-42793202-1	1.44408273398939	0	1.60152721713023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100153240-2	4.87653098923165	0	1.38050897846542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-65737474-1	1.19152636058539	0	1.89440471050759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10741043-1	2.10876075296466	0	2.17554727565018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120812236-1	2.21683981832975	0	1.43001038070201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34396075-2	2.29104090821534	0	1.54539761714912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-68051107-1	2.45835187929038	-1.22839520463457	1.21860582148223	-1.00803326471922	0.313438493106041	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45547307112966	0.67591700901439
Merged-chr14-74904593-1	2.55097544455817	0	1.40799856878928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99110448-1	1.80952639462491	0	1.42387805411726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64900801-1	4.29979233061373	0	1.40114592542572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70931179-2	8.15676931693162	-0.365990140254467	0.634956168818681	-0.576402212038324	0.564343349602543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33195105682574	2.56012186254786
Merged-chr10-25286495-1	2.48458679361256	0	1.56727579184584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90841197-1	3.0779280475826	0	1.37689767512841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94665120-1	3.17948931312995	0	1.38071318992536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20109255-3	10.7552511045724	-0.0693101367409815	0.636826170869174	-0.108836822215367	0.913331917378558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82270540545197	2.79671244268192
Merged-chr4-156077736-2	4.11772920235123	0	1.40100963320026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-29786100-1	2.37880304352174	-0.804615642442469	1.90578002665306	-0.422197541788461	0.672880835633706	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58636696354949	1.67656321522231
Merged-chr4-101048774-1	3.74197091253548	-0.29002508838289	1.07951761346618	-0.26866174739999	0.788189990935171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.788686275880602
Merged-chr3-9499616-1	2.29781735099309	0	1.47600756255282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167829802-1	1.60530111352373	0	1.51904660350639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59751897-2	3.74043868314035	0	1.50095110452734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54832032-1	3.81632976371911	0	1.38988214404699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55000845-1	4.28211281326291	-0.124642983895601	0.977591303786682	-0.127500094786849	0.898544598165469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45785862478356	3.0146896071546
Merged-chr10-14054451-1	2.62941974039121	-1.34411669078687	1.37183342366569	-0.979795846638022	0.327186902710831	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr6-87130249-2	3.4713161010535	0	1.39046619949261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16974326-2	3.5839607060641	0	1.3984408581125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139281219-1	2.10779389199879	0	1.50255464884912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54233351-3	9.11213593734379	1.1498247159291	0.837425730425699	1.37304679585686	0.169737799381142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59652745948425	2.20225658013615
Merged-chr5-35215740-2	5.56880235984258	0.67276107253496	1.08323074828115	0.62106903224681	0.534554203726839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.32509503823899
Merged-chr10-41580069-1	3.17210701568015	0	1.43923175548914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106398288-1	2.48712958725458	1.69930426862545	1.43811544103008	1.18161881872869	0.237356983055551	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.14143228603163
Merged-chr16-36706692-1	2.75545627676694	0	1.41393525476525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-117927684-2	6.32228669746796	1.08017964785499	0.894246449086005	1.20792165175385	0.22707740036859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	3.23671662386792
Merged-chr16-91695358-2	3.28058265832584	0	1.42527701778902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69563265-1	1.24016298664464	0	1.58497955195193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111007877-2	2.52833179238329	0	1.44649955068828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91260696-2	2.84552895220846	0	1.4085971407484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159811843-2	4.42288498473034	1.10023768285494	1.29772323293619	0.847821519204503	0.396537376816792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.859510663435501
Merged-chr8-37789619-2	6.2525801538752	-0.543102502471472	0.833784522036265	-0.651370333842501	0.514807456075752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8333152380902	2.30490350743656
Merged-chr2-58286960-2	3.58288738107538	0	1.39157379575339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145202851-1	6.96906799356765	1.38317913095174	0.856291278070177	1.61531381479093	0.106242753462243	0.947694426559574	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	2.82302891757894
Merged-chr5-105395366-2	3.25043742063034	0	1.38350849641969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59548994-2	3.65962535286223	0	1.39940407250073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69533288-1	4.72114716222231	0.433417439726247	1.06751898870858	0.406004431125454	0.684739344596072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	1.67279875369265
Merged-chr1-36003960-2	2.73417243797881	0	1.40331958576499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39484590-2	4.25737324080346	1.22280359364632	1.09200141858174	1.11978205599262	0.262806647708224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	2.17891801184633
Merged-chr11-3671384-3	5.59387117459623	0	1.36791019740894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63508428-3	3.79245301960464	0	1.40096000359339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155629500-1	2.69068592082048	0.620202903433749	1.42230056981607	0.436056144949694	0.662795994673818	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.55634759613363
Merged-chr6-28621169-4	4.71492784866105	0	1.37670549511242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35289163-3	4.24350872478201	0	1.3710229360406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19596822-3	5.72451948850422	0	1.35755597909036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-30448657-3	3.83676004418936	0	1.41050983917968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-12987370-2	3.93404545072989	0	1.49822171564267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108268407-2	3.56200706807296	0	1.38796702315707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119458467-2	3.41806644256825	0	1.42295948344424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189806969-6	22.1411729534183	2.8907291492879	0.456734894129355	6.32911824002043	2.46566119997522e-10	7.97802840294363e-08	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20595909847233	5.98074015256663
Merged-chr8-41276006-3	6.42453628696126	-0.0351297117958556	1.17955178739756	-0.0297822547269096	0.976240711165758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr7-98720391-4	4.50456212423304	0	1.39363959471803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34685938-6	10.657078820932	-0.517504889483431	0.854007696382595	-0.605972161229317	0.544533239493425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	1.17858215524007
Merged-chr6-73748574-3	9.55246453087532	1.63505305922874	0.760908902306495	2.14881578369304	0.0316490057169003	0.438229835012345	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2046848628481	3.87499105044489
Merged-chr6-100366045-4	6.77364752967936	0	1.36504620010249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98917581-4	7.51341719096819	0	1.35050878126084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9660923-2	5.41411369297695	0.0295296126441293	0.936245592298834	0.0315404557169909	0.974838529185192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	1.70113659014892
Merged-chr4-149160101-2	3.6254185347773	0	1.37951268158938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18689576-2	5.22668610925955	0	1.38049942286906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34790504-2	3.86149216740194	0	1.40463579006313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38368978-2	3.5508337818388	0	1.39093518881102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65529842-2	1.88335163026048	0	1.56783044365549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120862215-2	4.52778479676824	-0.690660600625494	1.41728161235684	-0.48731359710296	0.626036113405229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr8-71980981-1	7.38232359220358	1.53358193723801	0.725961777715171	2.1124830319093	0.034645039839407	0.465464587402454	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19590355417038	4.82282559925383
Merged-chr1-88255703-1	2.87918360324921	0	1.48126158900824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170206083-2	3.35911171856006	0	1.38047939088108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79127890-8	27.824364491634	0.262025876645949	0.383185346553944	0.683809751605576	0.494095308022385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06104810654004	4.27719410004116
Merged-chr2-76001551-2	8.61006128642009	0.216308052177343	0.816422247967346	0.26494629796761	0.791050831737523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7953101035406	2.62910134354719
Merged-chr15-101190665-2	4.51332464562202	0	1.39598641685387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6167280-2	1.78630240701288	0	2.42052832073904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67366008-1	2.23541209105146	0	1.425290820852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32764931-4	6.63725710101418	2.16493478497405	1.21683964380183	1.77914550697086	0.0752159096123615	0.764950726027757	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr16-88483543-3	4.22090622452327	0	1.4296313633518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95839256-3	4.35396292695393	0	1.38518138235194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70367161-3	6.06160481032385	0	1.37143554801103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68359673-4	4.7717865759153	0	1.37857324094856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75658693-4	4.9629548039657	0	1.36830377390294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73584212-2	3.26331598848591	0	1.4196206574563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99112402-4	6.80515175864909	0	1.3490297767849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13869320-2	4.17815039294864	0	1.42882995345273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111157823-3	4.98283309449514	0	1.37890347266494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26530541-3	4.40194163807396	0	1.37237424516904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12210888-1	2.94782246575324	0	1.39672920871368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99640404-4	5.81541852302275	0	1.36301674191412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67956104-1	3.38401608597711	-3.34065188925484	1.19677491412309	-2.79137860414014	0.00524840411976196	0.127878977833322	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01259914296816	0
Merged-chr16-57030714-1	2.84039876275976	2.04235002552875	1.39262421311201	1.46654783558937	0.142499099302376	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.990331813111976
Merged-chr1-5508585-1	2.49763679944198	0	1.39702653639588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75716337-8	21.0384937483528	-0.674374134848845	0.374819441514854	-1.79919732051071	0.0719874731626838	0.744514279613837	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15354170409194	4.46950764582905
Merged-chr1-156470280-2	7.96466581831616	0.504749934438562	0.713777993691238	0.707152558498328	0.479471676940718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62235589016187	2.97771010202329
Merged-chr13-3825911-4	5.94002777373148	0	1.36724146393556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84615518-3	7.40885978685135	0	1.4015625934898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127606662-6	15.8961826725943	-0.203145909899181	0.450018781113449	-0.451416515098661	0.651689382607732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06853476266889	3.86342963117378
Merged-chr6-134877014-5	12.3267715915979	1.03556567237074	0.544153828384903	1.90307523048105	0.0570307294750474	0.64545771882867	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30526401943093	3.81999967316179
Merged-chr14-60830250-7	18.8259400624345	0.44593541689519	0.477518727780909	0.933859534614503	0.3503763546355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9942535298182	4.50955885752191
Merged-chr13-45355039-2	6.04414412176075	-5.31140069605876	1.03464187047447	-5.13356442227012	2.84305652514359e-07	4.24576125412858e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07914600159287	0
Merged-chr3-79233882-3	11.2671014422978	0.0694065313925918	0.701543351530257	0.0989340590872927	0.921190626311734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21497457247336	2.88804970426728
Merged-chr1-191250935-3	10.9302890649264	0.355393182786449	0.615014638169373	0.577861339763063	0.563357738229259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32418542787021	2.53420545261363
Merged-chr6-51168239-2	4.01833250756308	0	1.37080406487748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109262649-2	4.66823466294037	0	1.41554756037876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23005820-3	5.14926796938892	0	1.39170947444928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13540049-5	12.1752260799606	0.346951356334664	0.568571365596537	0.610216020939865	0.541718718381936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92732381405122	3.54627146196663
Merged-chr10-19124944-3	8.47856621701882	0	1.36342603664074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90438738-4	10.2603759825759	0.38147536581067	0.717131548869427	0.531946149088091	0.594763293153596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21231472788707	2.62796090354981
Merged-chr11-78267988-2	4.0485146320977	0	1.38286836844011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111596001-6	11.18764377294	-0.40014017852204	0.587894124691913	-0.680633062512292	0.496103700997108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69286845201614	2.30933176054301
Merged-chr17-43060565-9	25.135932047017	-2.09582257834568	0.46655679292292	-4.49210602039596	7.05222987218574e-06	0.000660952006245077	C57BL6J_F1_Control-BALBCJ_F1_Control	5.65242417698598	3.46319464235875
Merged-chr13-101538309-4	10.0011148639669	-0.542405024806896	0.663097226769936	-0.817987171276596	0.413364512607756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30923017122179	1.86404794779727
Merged-chr4-63594044-4	5.67098271392002	0	1.37735893602798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42876347-1	2.51561617532503	0	1.39386095660768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-57944220-1	2.23970247317426	-1.61591877091735	1.9422996468719	-0.8319616252414	0.40543060548829	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.290599595397	1.70340695421451
Merged-chr13-94005968-1	2.41713918483898	0	1.40583711377351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57175420-1	3.80311260314828	0	1.41689299080535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-14618980-3	3.55968314836087	0	1.39947635225517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35035840-1	2.23277112776398	0	1.52686380240551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96148149-2	3.37448438788094	0	1.40858690510885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53109458-1	1.87591850629125	0	1.51989742325712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13456834-1	1.44638904861254	0	2.21591006300771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79664955-1	4.99218212367851	0.559238594729143	0.914746129756652	0.611359344999816	0.540961711036302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	1.74560409375831
Merged-chr2-3769431-1	3.14161750547671	0	1.39300431931431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134141485-3	9.07324852124977	-0.227222097443273	0.521052087104633	-0.436083268960488	0.662776315722659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48071049881126	3.4023443416647
Merged-chr6-98997900-2	2.85370737343319	0	1.51222047529289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31935855-1	4.24233389758229	0.159141595996443	1.05277371674153	0.151164104370886	0.879846265421734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64109723835872	1.76340839962552
Merged-chr9-46175556-1	2.00286096757064	0	1.48274240901223	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25018062-1	6.23198586538968	-0.739779245106372	0.662658653625781	-1.11638056948117	0.264259267097829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44005335984012	2.43214483180638
Merged-chr2-11599636-2	3.07930179354754	0	1.40965995504585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87639472-1	2.27985184405491	0	1.44411661625218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124015477-1	2.06168009681469	0	1.4861272461004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3176011-2	6.72716915774792	0	1.45017813954763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76348152-2	12.9170003177188	1.1619022174429	1.05340969982859	1.10299175869745	0.270030744094037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14227273603934	3.15385689655795
Merged-chr16-31192577-2	3.08036434866504	0	1.42426872905549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132803755-1	1.92338090307517	0	1.52832331373271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38650555-3	5.68849321949826	0	1.39838149214216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-28176970-2	3.55052733980399	0	1.41363529126598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41042386-1	1.95139895597957	0	1.46361367597829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11523369-1	2.672518537835	0.642983187239207	1.47535005830634	0.435817373388205	0.662969237720317	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.601513806634888
Merged-chr4-41529061-2	3.44369524243809	3.48966848785593	1.24355880289977	2.8061949943329	0.0050130346086129	0.123360592254228	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.67273088548657
Merged-chr5-105655335-1	4.48484948065728	-2.03366442321932	1.07778190371838	-1.88689791153767	0.059174058080302	0.660365966575063	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11177302607796	2.05607979245859
Merged-chr5-103805473-1	2.09367643330052	0	1.46763248687509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33372589-1	1.85912621311941	0	1.44753993357247	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54770222-1	3.13168033552716	0.762482619773954	1.1582646326298	0.658297420376865	0.510347035266975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.09662457429765	2.01397884452936
Merged-chr2-153191667-2	2.11006823501943	0	1.45778125648512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134526980-1	5.56928860188464	0.136265049390694	0.799455766912111	0.170447265540427	0.864658403403694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20026094593162	3.06218532170791
Merged-chr7-126667671-1	3.02174691080327	0	1.51393203654475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7914340-2	4.90762811094504	0	1.36771776511289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114722671-1	2.16734184362054	0	1.45176575505574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68163107-1	1.78163081073009	-0.666415986768668	1.48687523836207	-0.44819899449182	0.654009588341793	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.577068348605183
Merged-chr6-67168917-1	2.64687556604482	0	1.44498399156912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-65342244-1	3.45556456456199	0	1.49668135603349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24234979-1	2.27514217220078	0	1.47735728949716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171378140-4	9.88169669266861	-0.418637130878834	0.655043594232138	-0.639098121964803	0.522759101587145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34574658350842	2.48629754829693
Merged-chr10-22055601-1	3.10508836643255	-3.97678150901394	1.2773203176847	-3.11337841726526	0.00184958699317849	0.0586933446364213	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91136621420107	0
Merged-chr6-16842692-1	2.21685206053002	0	1.42536931022909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126894926-2	3.81918391742167	0	1.41272472371543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161337426-1	1.61987418016368	-0.446918949347361	1.627362921956	-0.274627708003934	0.78360227662979	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	0.67591700901439
Merged-chr7-81538321-2	6.81574972907262	-0.543786131575887	0.872574311429262	-0.623197502439849	0.533154742768205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53175485027438	2.58315575650776
Merged-chr9-99379694-2	2.72068489338158	0	1.42041628966855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50501423-1	3.24617818646394	0	1.3944873901764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34177061-1	4.70134506573588	-2.75410908138561	1.24011455734366	-2.22085053761884	0.0263610863035487	0.390240275156483	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35689265241174	1.30139522650344
Merged-chr18-60859310-3	5.06608605811928	0	1.36640487225261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80808341-1	1.89361338391417	0	1.4563959515035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7888512-4	7.1639143950378	0	1.34756901694945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5592639-6	12.0725735264231	-1.58992829316352	0.574268120036889	-2.76861667518891	0.00562948250437275	0.134855123093357	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76256330325872	1.85237491315173
Merged-chr6-17640933-4	6.78569037852361	0.38727701257687	0.875887611781162	0.442153773346928	0.658377934511188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.39020008251549
Merged-chr4-117787199-4	7.30691436838892	-2.05832691483711	1.05230910753193	-1.95600978847809	0.0504640010234029	0.59286203406768	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98033324113269	0.465515277017237
Merged-chr4-129069070-4	6.39671079699536	0	1.39359050552488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-65127598-3	9.10619732325511	-0.79285055758228	0.773798844313348	-1.02462101540852	0.305542044541729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98492138201329	1.04506147362244
Merged-chr6-134047592-3	5.37779228294913	0	1.38789474491946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87422589-4	4.4573165301099	0	1.36511690117127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25393149-2	4.68949853186727	0	1.3783384050052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35444650-4	4.74215426361359	0	1.36096203768432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99630280-3	5.01462237825605	0	1.36883821230865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30928481-3	7.04218372405641	0	1.37023754258988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55577572-3	5.65470378534502	0	1.36838077527162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59001368-3	8.20614663333602	0.54637541855637	0.737313956992707	0.741034959903485	0.458672243372602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9148755136756	3.37636158853831
Merged-chr1-184628933-1	3.45588219890171	0	1.39698248663959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143853903-2	3.26273288162388	0	1.46019946008169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-54032517-2	3.1340412660442	0	1.39212341059179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39840852-1	3.29083996999292	0	1.45080500571194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95180596-1	2.90954366199556	0	1.46597349171137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123580242-3	7.32794585602656	0.0215984157880417	0.751577131978413	0.0287374573667338	0.977073982036452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50670197153503	1.71762629844815
Merged-chr14-47507449-2	6.11984499853215	2.06577998792262	0.831969419839051	2.4829999019943	0.0130281123468863	0.242200806793568	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32121820265614	3.63786984250727
Merged-chr13-95883106-5	13.1852646790121	0.179523670013893	0.465368453131934	0.385766737744463	0.699669431515894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40933044418577	4.73521011875197
Merged-chr5-97914113-7	11.9988298010846	1.90587573263832	0.620753775612801	3.07026039552778	0.00213872215044883	0.0656458483208629	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0292145465841	3.9882919801589
Merged-chr4-145240328-3	4.31402197269687	0	1.36734066389122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72556339-4	5.00896926468865	0	1.36526525458829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45245683-3	6.52723320616425	0	1.38378550575591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146662864-3	8.88279100444441	-0.543067551878962	0.545715634560439	-0.995147504462448	0.319664529177618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67720860808422	3.34777063734244
Merged-chr11-29871574-1	2.73289957695733	2.78340304548706	1.18263689598347	2.35355674674129	0.018594769419278	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.40024388691264
Merged-chr5-65092146-2	4.27450749040911	0	1.38912474119337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152259655-3	4.9507934924706	0	1.37490552150302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100805618-3	3.18896925383289	0	1.42665148758431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122608482-3	4.94179920022644	0	1.40828580739437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83683213-1	2.32627510322344	0	1.51927313536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-98605981-2	2.45183051304649	0	1.52197883523962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51789582-2	4.6427215779858	0	1.3593238009875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60403343-2	4.20935723649248	-1.19073504487213	1.3867009058772	-0.858681955009535	0.390516008730138	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	0.303163067301871
Merged-chr5-44055288-3	9.5955416234849	0.809336512956745	0.845770293428804	0.956922369164381	0.338606439692429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82610300771204	3.3940797292678
Merged-chr1-107525805-3	3.89374792903108	0	1.38554111545279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-153635445-2	4.79663961733305	-4.0810486350716	1.14213536392772	-3.57317421731621	0.00035267994755589	0.0165127728416801	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1750991113525	0
Merged-chr17-23873994-4	10.1685750306134	-0.59465729694096	0.773926428212183	-0.768364117393761	0.442270892075347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	1.48926165652838
Merged-chr11-82845539-4	6.19250929466256	0	1.35444100141024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12929967-5	12.244160615999	-0.422338946640512	0.601005739188878	-0.702720322122886	0.482230060455155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62911341882201	2.76669197674944
Merged-chr1-144263528-3	3.94948825575837	0	1.43447486499379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44265637-2	7.22321024250875	0.882705009337423	0.719706514633531	1.22647911529172	0.220018429823838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85705179220891	3.0434466017516
Merged-chr2-59207409-1	2.56180548504613	0	1.43980943797134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-27369960-1	4.49613406498525	-3.60122110473102	1.2054380327602	-2.98747924560252	0.00281288392921425	0.0806038784966564	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75723500527035	0.55634759613363
Merged-chr8-108625772-1	2.88051462267149	0	1.43904264506843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91403288-2	2.41264631446939	0	1.43522814706631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21820339-1	2.27085246215643	0	1.41833842570975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6165387-3	6.50836334695673	0.95427468234755	0.933750746312153	1.02198010134552	0.306790318467772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	2.29165166085225
Merged-chr9-118617877-1	5.16418414199265	0	1.38679404760469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84749439-2	5.75100438715652	-1.16725467900467	0.799508420333492	-1.45996546042352	0.144299566789272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13178612559225	1.79973735522865
Merged-chr16-36602852-2	4.75704190258178	0	1.3961775788281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46786278-1	4.58581272493221	-3.40444053924878	1.18534192071363	-2.87211688016497	0.00407732134982796	0.106762577675962	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87757319456894	0
Merged-chr8-114452922-2	2.82898854746168	0	1.48756909432245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21334380-1	4.86707806545318	1.57956488625616	1.06112224940501	1.48857955541112	0.136598118562136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.06583771842856
Merged-chr3-65549918-3	7.89410511193109	-0.0342503161178837	0.82255005114159	-0.0416391878771983	0.966786332909903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75395548195819	1.73694414934445
Merged-chr16-92705826-2	4.46483159930239	0	1.39092201271044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4797481-2	3.08870778115368	0	1.43242763785957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98329610-2	3.52059188258584	0	1.41008303651552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114983327-4	13.0983769646646	-2.4174300911428	0.674800292590082	-3.58243782299499	0.000340402653846595	0.0161324741590645	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04353386367522	1.6776376524744
Merged-chr6-71478267-1	3.04333959860253	0	1.42338809003682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173350139-5	19.7085844334363	-1.3143859386899	0.40596680722665	-3.2376684874044	0.00120510755910416	0.0416455446950686	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27999314804075	3.82812899885341
Merged-chr8-115407727-3	4.07247384901587	0	1.42139349837886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99202955-8	14.5230506236202	0	1.35498358496594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94692696-4	8.16866288243529	0	1.3603891041666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181161656-4	4.98414349260801	0	1.39867395253879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95834935-2	5.25572848707685	0	1.38413648483171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68134786-2	11.3841885376586	0.256349829971629	0.608388441535255	0.421358810375713	0.673493091780665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65491702058163	4.1907931184372
Merged-chr14-27042472-4	5.82801796147258	1.50571014821328	1.21096227204682	1.24339971852985	0.21372057396736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02674429890598
Merged-chr1-133613849-2	2.97118456692708	0	1.4941664833083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131091045-2	4.80412993182608	0	1.36565292388713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134431744-1	5.65314145276272	0.35178468629989	0.998694374255452	0.352244585899618	0.72465484218894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	2.06501871042627
Merged-chr18-23885733-1	3.54970664407855	0	1.3716898586116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72863578-3	3.97853180137923	0	1.45633429424401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-7130903-1	2.14337073147439	0	1.43513426448998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88667985-6	12.8043892150721	0.0626539470935278	0.599708585362967	0.104473987237663	0.916793210472771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11176840065363	4.19683417754453
Merged-chr11-67608339-1	3.81228787414041	-0.689896917306466	1.36446874058578	-0.50561577322049	0.613126406458107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.376242425970964
Merged-chr8-79734507-1	2.96209224720589	0	1.44764285530622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89415911-1	3.55524269579781	-2.17018185579761	1.20026401700401	-1.80808707505422	0.0705929494723058	0.735549576454872	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71664175267955	0.41385117919798
Merged-chr16-76680795-4	4.73375073974874	0	1.36730808296706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92992415-3	5.29284414704252	0	1.39258952068583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123471027-4	6.44494898971337	0	1.37136468881028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75933521-2	4.26067002905768	0	1.38407746062666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38814195-2	3.61411310370706	0	1.37447234554863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37197019-1	3.8997534104553	0	1.41511882159657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58592907-3	4.44092254211921	0	1.38122934282388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109477010-5	10.7139317510329	-0.523947856250795	0.762896435707845	-0.686787657835439	0.49221654848188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77580287295963	2.49907109010454
Merged-chr1-91483460-3	4.3330026171664	0	1.38367004868581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55729600-1	3.21499357142434	0.667937674503232	1.13042113523567	0.590875076273214	0.554604126769524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	1.27992882773773
Merged-chr1-191069422-3	5.07749973793988	0	1.39442489154558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136043955-3	8.93086018497689	-1.59684725128275	0.547875669065237	-2.91461610990542	0.00356126307576766	0.096794687922338	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0060675725416	2.20225658013615
Merged-chr1-13277984-2	5.77394703760872	-1.01550307957793	0.965121080843419	-1.05220277510722	0.292706526562971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7094652900924	0.897114879832661
Merged-chr19-55292697-2	3.14194873022213	0	1.41563156296392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55191374-2	4.65213195561342	0	1.38518674151684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29024587-2	3.99100105630375	0	1.43091423572802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9913459-2	4.1354525144045	0	1.38730025373641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123935570-4	8.99784087766497	0	1.36204248290242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94337746-4	13.4490455207889	-0.316614340193969	0.486583909743885	-0.650688059867455	0.515247872381365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42302823226856	3.7645075052371
Merged-chr11-114973001-4	11.4012740466734	-0.792546163450979	0.492589174068585	-1.60893946755848	0.107629578365045	0.954013110300358	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74396774379757	3.95767942966791
Merged-chr9-92207552-3	5.00854922633771	0	1.39265553544573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8672066-3	5.55147176594812	0	1.37602443024337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126492402-5	12.6648570401952	0.29820171052347	0.51573972658185	0.578201940152741	0.563127789063039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54184396394587	3.84213680272921
Merged-chr19-6487315-2	3.68094499018998	0	1.39878643396431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20585816-1	2.44190947596237	0	1.4023323919732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-134698459-1	4.32731314652513	-0.0577458315032594	0.788318233062986	-0.0732519293368235	0.941605643709126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82856958860614	3.04522609322883
Merged-chr17-6215963-2	8.2735117935752	0	1.3777335997612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67855835-1	1.39543463469172	0	1.6006073150406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99349871-1	2.74462318908702	0	1.39861253472557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156014088-3	4.91169304702391	-1.86580169180108	1.29173699945164	-1.44441298235874	0.14862284103383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03300427768847	0
Merged-chr15-97351300-2	4.30644076820918	0	1.38564181206069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81836169-1	4.55186069971637	0	1.36856529285179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32480243-1	2.14280882018625	0	1.47139051766738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-91362192-2	3.59696454137447	0	1.41040280770208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180127864-1	2.63068728773789	0	1.45268708268099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86668067-1	2.42655438123694	0	1.53081415895852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117152866-2	3.99868569914887	0	1.37129638180773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135134329-1	3.02581183365814	0	1.41427260858803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46604941-1	2.0505320779854	0	1.47051971758018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76678733-1	2.93822257300942	3.48348793282594	1.31216250554823	2.65476868764096	0.00793628081575523	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.86546861336755
Merged-chr18-61326613-1	1.52055749735137	-1.00727872260069	1.88588163676417	-0.534115557924937	0.593261586445644	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.577068348605183
Merged-chr14-118813227-1	1.47290972663088	0	1.50511547001586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121990990-1	4.47404500289396	1.00932786385403	0.921836269930501	1.09491012317201	0.273556013624322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	2.8629509289361
Merged-chr17-81708762-1	2.52415608393246	0	1.46313844716564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35658968-1	1.65833733576544	0	1.5404674998633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64209249-1	1.20983129386669	0	1.64656431383038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84843793-1	1.87322629456492	-0.68599103356019	1.45894998538298	-0.470195030969561	0.638215683949009	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr5-34974073-2	3.59055845702806	0	1.41142829394968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83235580-1	4.22381398505191	-0.880948844578693	0.853625942115801	-1.03200805073375	0.302068346067444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25974245670388	2.13836773113792
Merged-chr1-39418044-1	2.56680760498852	0	1.47402313280632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-18043215-2	3.95332627641857	0	1.39991692412005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61590138-2	3.29135973596603	0	1.38727952619138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118662220-1	4.03531325655075	0	1.38447829346871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8530052-2	4.63783421822415	-1.77953974610654	1.0991528151714	-1.61901031553018	0.10544504364048	0.942744593298168	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61088064940404	1.45526469271556
Merged-chr18-14813220-1	2.30322480597393	0	1.45086922208686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35678534-2	6.88044419849426	1.02228530438929	0.709486846347155	1.44087985514122	0.149618628173972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56493919553409	3.94791748896602
Merged-chr12-41438664-3	5.77005321703892	0	1.39604373771302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165926428-2	6.6062758691712	-0.772553279841143	0.791719355011039	-0.975791831981134	0.329167633266033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90869966812203	1.78685594785814
Merged-chr1-58344012-1	1.36644631680982	0	1.82335990156196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33962290-1	2.85249354978465	1.29232256455772	1.51158999390192	0.854942523945792	0.392582967561591	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	2.2200817938085
Merged-chr2-181333218-2	3.56432070153473	0	1.47283680109057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47273127-2	3.19165800727061	0	1.41785127091458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57729574-1	2.20808862137136	0	1.48970530431871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43920643-2	5.35453962821167	0.841068374355501	1.0205217610034	0.8241552571388	0.409851346281206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.30064958020929
Merged-chr12-30922596-1	2.72041034329947	0	1.40757843496596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72389056-1	2.22808835700688	0	1.74056285682048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72570796-3	4.66373201782397	0	1.39338103491912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10521351-3	5.04339328420257	0	1.36492222551379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128440039-3	9.33448094862869	1.75716102899138	0.76309358196799	2.30268091688011	0.0212968026654884	0.334721302233448	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19110052793478	3.8243038332221
Merged-chr7-45536268-6	15.1825307617194	0.21146701510869	0.525253020390113	0.402600283862491	0.687242300804885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42196541827309	3.6792870247787
Merged-chr6-97496191-3	6.86101883575626	0.859037878881533	1.18018259566303	0.72788556790987	0.46668363843425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	1.02674429890598
Merged-chr19-57073000-5	13.1989707828258	-0.500464743386058	0.640604506317147	-0.781238249888756	0.434662380876125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78107804327743	4.33565775931447
Merged-chr2-129304626-5	13.8290179989459	0.64566765311503	0.419981475044944	1.53737174489883	0.124202301472256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77978588324802	4.4093802718133
Merged-chr11-53737780-4	5.69224543706346	0	1.35969539888058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160882174-3	8.83287311962005	-0.898088490781379	0.696910218905933	-1.28867172042802	0.197512237941673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83455728926859	2.07970490012652
Merged-chr4-55591702-7	16.2874792140659	0.892274786699117	0.44888696549232	1.98774937855571	0.0468394148298893	0.564805623499989	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14176830104683	5.00738470613606
Merged-chrX-151508751-4	8.37898407406388	-4.36713441353512	1.06041236253262	-4.11833600572605	3.81617997952752e-05	0.00265273308832655	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0524329430161	0
Merged-chr5-146675420-6	13.3832558606652	-0.0225727804646023	0.405208145902149	-0.0557066305129346	0.955575517321586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16294232910426	4.08477042373616
Merged-chr10-93271222-2	7.39002373837234	-1.74579246178248	0.75605495698609	-2.30908143072276	0.0209390629835303	0.330591497159955	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3949744081127	1.338064021838
Merged-chr18-79596368-2	4.34643558948257	-0.68257338100076	1.48832132247895	-0.458619634544955	0.646507334335325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr4-131977436-3	4.44922384402588	0	1.38401263426578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150859863-2	4.33206658518788	0	1.39827221942175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61454716-7	12.8987674246529	1.15800067768705	0.575601224423357	2.01181065736464	0.0442399000860373	0.543294776089118	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88200448800609	4.55116864473073
Merged-chr7-122383477-4	5.33047971020428	0	1.36023208777245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6952421-3	6.04928577326853	0	1.36009875647798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66807777-4	4.60148307193666	0	1.36869818859568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111049283-4	5.85496887745694	0	1.37383137307261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9494307-1	2.02521333271472	0	1.49161098443155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-25082757-2	3.65815456378928	0	1.40183289528959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43540296-4	4.71342484391811	0	1.43516909010808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60351456-3	4.89670220746933	0	1.38077954238366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57747245-4	4.82803127046802	0	1.36657101991532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131524027-5	11.5435292361342	3.92222678517786	1.13533301884325	3.45469278183601	0.000550920194833731	0.023107008096438	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.18249388442453
Merged-chr11-17895930-1	4.08692605780359	-0.650000384137898	1.23298201500052	-0.527177506427475	0.598070327459746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	0.815775955292901
Merged-chr18-65389216-1	4.11083046985434	-2.02878015219116	1.39793002973149	-1.45127446227108	0.146703449502912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr2-103657555-1	3.04854766279389	0.07622779880269	1.47178045765093	0.0517929140901593	0.958693701712029	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.600815099743027
Merged-chr2-164926990-1	3.99885253382991	0.1483360350467	0.969117059132098	0.15306307287537	0.878348536250723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69928069889504	1.98686131458897
Merged-chr2-13432173-4	5.73527216233514	0	1.36533946592056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12518029-3	3.87552346451842	0	1.38147785898999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-60385585-2	4.15282019969416	0	1.39868777973606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128337859-6	16.393407454296	-0.875242296117272	0.455491009762879	-1.92153583135024	0.0546641895756053	0.626896768173065	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01428905101737	3.44416450654913
Merged-chr2-164523601-4	11.3755937325352	-0.598965517556754	0.602939923704269	-0.993408288303256	0.32051102408527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42984543443555	3.508304775552
Merged-chr10-98775515-2	3.01766742995891	0	1.39414512897237	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150176787-2	4.24621409515506	0	1.43918615650621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45231534-4	7.55440135838139	0	1.35644402432305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4170406-2	3.97081335850527	0	1.36371212829702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-76598629-1	4.46269728444753	0	1.39692200814517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33263204-1	5.51088417682891	0.745402376809369	0.97104132688139	0.767631980405318	0.442705857165684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.70266130792036
Merged-chr5-99965666-2	3.54295334296211	0	1.40865887376129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72862745-2	9.8513998750154	-0.412355162367113	0.665667160437634	-0.619461476957966	0.535612392412017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31403469222182	3.53563007913185
Merged-chr1-34511219-4	5.89239778194719	0	1.3571198183053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136554412-3	6.67152634552114	0	1.37276760889454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110464595-3	8.94096730641126	1.41531883350569	0.619185534907227	2.28577502818722	0.0222674233106043	0.346333294346534	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51050682664478	3.94562386759569
Merged-chr9-89267813-6	20.0583678013094	-0.393332682768517	0.404063923662798	-0.973441724772153	0.330333810002472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71664590371632	4.25919627813659
Merged-chr19-34959575-5	9.47720471478232	1.24245060673622	0.682785159460655	1.81968015783714	0.0688077267290664	0.724446875317707	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	3.34426002502676
Merged-chr10-66741994-2	2.85836170695556	0	1.39678487297889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9524552-2	5.67605585675778	0.0161033060951014	1.22348742737136	0.0131618075795835	0.98949870013646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.723581231604105
Merged-chr4-43966020-1	2.48512219592532	0	1.42567151510226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67097127-1	2.26810021119652	0	1.44957955566812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-40875752-1	4.62734485928739	1.67829948501398	0.870553486630392	1.92785338383985	0.0538733654281077	0.620445396463243	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	3.30459792214267
Merged-chr17-10607052-2	4.18111103570102	0	1.8049647650921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36767500-2	3.16614937188034	0	1.40437547466681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182614680-1	1.5267201926518	0	1.53455762907179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131028114-2	2.11161587084178	0	1.70809961899184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91421856-1	1.46058846032942	0	1.57908791094858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99315105-1	2.1828121894315	0	1.47791302657305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21331823-2	3.42907907225745	0	1.46332679868421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58366579-1	3.33118797944986	0	1.40484581430566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-92861767-2	3.66133094382646	1.04109076281758	1.11280756135411	0.935553278907214	0.349503239428563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.70133746420996
Merged-chr19-6360063-2	4.00478862625375	0	1.44065577219278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129985005-1	1.95224394901207	0	1.45301088706224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15464556-2	3.09362397648552	0	1.44387787600435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3474135-1	1.72352352133412	0	1.51521572403256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15652793-1	2.77448924408256	0	1.4210034749241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39199924-4	8.83094062771456	0.548334544881671	0.681959640759082	0.804057178913586	0.421363953378206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11736049306998	2.8239157937873
Merged-chr4-45418541-4	9.61477617425488	1.15133727884068	0.626482110041272	1.83778157490376	0.0660945977138958	0.708055947520591	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62038931457034	4.17062282625333
Merged-chr5-21091408-4	5.13800689381605	0	1.36226530013716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119863090-4	5.72473767009107	0	1.36568838373457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126496465-2	3.57247119466923	0	1.47377801813797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21266701-2	5.77960037218224	0.34968109117359	0.837980395087128	0.417290300851528	0.676466082016016	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19540651000097	2.20487765670479
Merged-chr13-23721003-2	4.21059030622115	0	1.38935490019399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98972565-3	5.3103444364339	0	1.372577248314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66241926-3	5.02837070442133	0	1.36570837666881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121795106-3	3.78525981171676	0	1.37823054163954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104620878-1	5.35810261932896	0.847046646427739	0.87334693789527	0.969885631555641	0.332103502846998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86719832675847	3.23635865228093
Merged-chr1-64052582-3	4.68156069187029	0	1.38219363571254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50862683-3	11.4294774289674	-0.150564886661609	0.475367138977593	-0.316733897478568	0.751445525562792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67155452884011	3.49145738164427
Merged-chr4-46126698-4	4.20959607766835	0	1.38067925930613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69663271-3	5.04495889543764	0	1.39299673769353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64315718-6	18.7739908516978	0.230765546036592	0.426986474505839	0.540451653190331	0.58888559412143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22260500678504	4.49970159027766
Merged-chr15-55563939-2	5.03841583027031	0	1.37133068574513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36532175-2	4.60121001666431	0	1.36412587353364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-93011655-4	12.4870208448102	1.08866733071119	0.519506999399915	2.09557779196183	0.0361196609704225	0.476098120924151	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05514754465273	4.64159693973826
Merged-chr14-30564621-3	7.22158825983187	1.02198002352672	0.784671383081986	1.30243060415004	0.192769226325274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	2.79053920549463
Merged-chr14-25745941-3	7.94388695363928	0	1.36944239298667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38619242-3	4.29590754129284	0	1.38018292684651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144453850-2	4.55322845851131	0	1.35691680390066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24954582-2	3.85733390092928	0	1.37699453342378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136980137-11	37.530103561811	0.228238657587359	0.328048320562573	0.695747069199898	0.486587242596842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.31066152822819	5.51837513499675
Merged-chr9-115733355-2	4.61908632926905	1.80862074963659	1.26958401233113	1.42457744589562	0.1542793834661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr17-29379870-3	11.4020182045024	0.00120269141662106	0.521585499849702	0.00230583752226169	0.998160209471594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70447800446373	4.51923149751363
Merged-chr14-73411093-3	5.48892002201479	0	1.375677031665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-31400487-2	4.08533805955008	0	1.4392815942749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79228577-7	15.650140449357	0.981787125061628	0.487396974556867	2.01434800852888	0.0439730088464673	0.541288221894274	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41319045218001	4.67222801909103
Merged-chr1-171673035-4	7.64568839982563	-0.493115005770571	0.761960282647183	-0.647166285436039	0.517524328894082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	1.39207274064238
Merged-chr12-35641153-4	12.9178503292866	0.445232828010865	0.605836756598801	0.734905604787708	0.46239698470608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53473953900404	2.78209408473084
Merged-chr11-55158986-4	5.18041928716452	0	1.36364245298385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129675133-6	14.1315161049137	0.155883241362502	0.432102125270317	0.360755553481676	0.718282191533709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45950607795885	4.63031971152116
Merged-chr4-45941909-3	5.06305184580215	0	1.37483763720589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120189515-5	11.6678165092636	-0.108312265575775	0.650535004044503	-0.166497213681625	0.867765675729119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71743683249264	3.01302402024858
Merged-chr19-21671225-1	1.98428881475156	0	1.43492802873681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73257552-1	1.98332568567096	0	1.43754924991275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6716700-1	2.41096134482644	0	1.47509935197601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-111097325-1	6.56526273152159	-0.279976486100462	0.626652090192381	-0.446781380741122	0.655032916122799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76616155187212	2.78597213134036
Merged-chr7-49213198-2	2.12803161676015	0	1.47112005196311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64378214-1	7.49968781770634	-0.853749570123614	0.907661165254535	-0.940603831920249	0.34690791747303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35857817179383	3.27483648525452
Merged-chr4-117190926-1	2.20169246785605	0	1.42785852806392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149118783-1	3.25396169159034	-1.76931801066615	1.3060723005198	-1.35468611497387	0.175517583569456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr14-25402629-3	3.65472238130778	0	1.3881822675546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119442363-1	2.16572221874545	0	1.65476413020262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55215335-1	2.17496949046385	0	1.46675058558401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67519346-2	3.79046827773445	0	1.40881812126543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13293499-2	7.82738756438125	0.904063511747746	0.708094418601476	1.27675559642642	0.201688546522973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	3.24025651188993
Merged-chr19-41997961-1	1.12605036516772	0	1.63712111033687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30443045-2	3.92163512260537	0.0295034386253176	1.28603963743034	0.0229413136007759	0.981697085569934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.724326877898254
Merged-chr16-19998800-1	2.22354168047415	0	1.40760279005861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-60331904-1	1.59948708242801	0	1.52404645643854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146811264-1	3.71717860908141	2.78248561837637	1.17832607960464	2.36138847008289	0.0182066474651709	0.301277062270693	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.44790810950236
Merged-chr11-113778044-1	1.83419532481625	0	1.45264614036608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109921451-1	1.8732507255667	0	1.54074671462627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80948796-3	4.79784773446962	0	1.37544513042911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-151001842-1	2.95502363111582	0	1.38937148260983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-62571897-1	1.56651189294102	0.626954383179407	1.37982267551327	0.454373155555074	0.649560270302579	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.18909650862134
Merged-chr16-59499379-1	1.12020622645418	0	1.67026752801543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21562711-2	1.90092572449339	0	1.57923006535224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43376730-1	1.75056813641705	0	1.50866945685444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90033475-1	4.71734808121345	0.492428708733965	0.725567719916629	0.678680563118969	0.497340284283527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81976602193181	3.40459456996698
Merged-chr4-105716011-1	1.79734888554524	0	1.55409228224186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136322215-1	3.03625771258245	-0.035491001492287	1.42630760799249	-0.0248831327081261	0.980148181218324	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr13-94467132-1	2.49310344471494	0	1.49059703620824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5602639-1	2.77422904326121	0	1.41935139540105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46341064-1	2.74419216958851	0	1.39966920922435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35743410-3	8.94043823249817	0.522834063190622	0.815212697070528	0.641346810555612	0.521297382328065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.62438888480879
Merged-chr13-74854544-3	11.2367014318936	0.482850073936568	0.580436623006539	0.831873894234149	0.405480128649587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47302661389487	3.93632477986795
Merged-chr13-24806290-1	2.30579917511093	0	1.41966126148461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69666370-3	4.60378693236366	0	1.39014060004072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112082662-2	7.03424820410795	-1.51553185750072	0.951161652166682	-1.5933483588709	0.111082063721795	0.970321372626234	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9868467483527	1.1442012793241
Merged-chr2-24315629-4	5.77293554785559	0	1.36103668030151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4973528-4	5.43824437713146	0	1.37887225907284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11205167-3	4.13898488504102	0	1.36766035573712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88145956-5	9.78904972010329	-0.109008499763106	0.636465202460726	-0.171271735425052	0.864010103923023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79747371962553	2.79932520607913
Merged-chr14-103826117-4	4.47534381331689	0	1.37512599104629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-144935445-3	8.22815300420692	-0.977594170206344	0.773956457589063	-1.26311262167336	0.206548708654052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2484890300238	1.88173439965075
Merged-chr16-28517941-6	23.7928066065603	-1.41589111006539	0.483381688607831	-2.92913683624063	0.00339904750841848	0.0935584369519526	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36751422719136	2.87690363630759
Merged-chr1-152424863-4	5.07888408879019	0	1.38488907847664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180051191-4	5.53782735837602	0	1.36319684736185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47225486-4	10.9024309048998	-0.208919372233254	0.679015635999466	-0.307679766351386	0.75832601744111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64967739731707	3.14167137216029
Merged-chr13-110626575-2	4.17789292921573	0	1.36739736844954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157094135-2	4.58641478829392	0	1.38933264590754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107876164-2	3.3934965681817	0	1.38374765965629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-103940720-2	4.21433432001562	0	1.40392122902156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58521141-3	4.34403427295652	0	1.40155304511448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128615052-6	17.7678315546409	0.37942764523032	0.529961104712921	0.715953759353443	0.47401990175421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0581710407364	3.63100150161641
Merged-chr17-15812581-3	9.28643173463293	-1.77080782597564	0.757867726763991	-2.33656581939012	0.0194617714785897	0.314296623827883	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49972584710748	0.882176137820124
Merged-chr12-111699462-4	7.29907281360444	0	1.36000830068622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20142112-4	12.8774798306179	-0.148051724913976	0.567994552307885	-0.260656945233735	0.79435707120576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14669124014738	4.27751675523142
Merged-chr6-116725495-3	6.34043019201878	0	1.36041927383466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126789179-3	6.8615783022371	-1.26522956429593	0.825287992299661	-1.53307642435264	0.125257025745633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	1.18909650862134
Merged-chr14-74944838-1	3.01223122450955	0	1.44256899557663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-140268489-2	3.75210576634861	0	1.40818469497358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31138646-3	4.74277784859369	0	1.36922306119797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83823954-2	4.88510076647393	0	1.36722805290447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81171472-4	5.68867284149028	0	1.37899316078829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97657361-3	3.30380420451631	0	1.38491400350072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79534401-3	3.34226402834391	0	1.3853560263935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113378517-3	6.98075448365106	0	1.35137533394064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164067279-3	4.35036803715324	0	1.40340403323648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58521572-1	3.37003484098207	0	1.4152855232093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89934345-2	4.18043061193558	0.936843176914096	1.23403566843496	0.759170258103016	0.447750715146515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.08918047352118
Merged-chr17-43334323-4	9.83781436580897	1.03093211101227	0.670369553964125	1.53785640310782	0.124083729034939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96334085054552	2.63987470080723
Merged-chr1-151706233-2	4.9267403712562	0	1.36703225146327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95680514-4	8.01175644452756	0	1.35477276264725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32830780-3	14.4530097907442	1.33731591148339	0.637118929584685	2.09900514548381	0.0358164471505355	0.474788191018737	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2530294791555	4.40732665427611
Merged-chr18-37908279-3	5.45607354648361	0	1.37293916861627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13984384-2	5.1563415920067	-0.463412200651911	0.910288871206784	-0.509082572917274	0.610694346604676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	1.25298535761957
Merged-chr6-30205787-4	5.9140391120752	0	1.35971904866318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-50910569-1	1.99943407517772	0	1.4451214589637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47127739-1	4.58018140157084	0.380218911912163	0.912039753672496	0.416888529673341	0.676759943810406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	1.4068548238317
Merged-chr1-152720798-2	3.17308223169926	0	1.39163171864581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-112451762-1	2.56527252440966	0	1.42546420280963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49194717-1	2.83089800140398	0	1.41033657588372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77462026-1	1.46268761217603	0	1.56853944571743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107856243-2	4.03700145818731	2.62101033728003	1.2504103572845	2.09612014328804	0.0360715345534297	0.475925375434438	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.2636608194585
Merged-chr6-115911920-2	2.02238800072003	0	1.52959822280965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11026038-1	1.94045458563957	0	1.49614630258245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170160723-3	3.3860484632159	0	1.39020853710174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82751692-2	3.77526617617972	-0.216706756529298	1.21335676240003	-0.178601020940165	0.858250992785114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03247245696714	1.29741062002251
Merged-chr7-97172357-2	5.01010320921019	2.02438406175683	1.19749849106551	1.69051074123323	0.0909302850652118	0.856651536544168	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.30064958020929
Merged-chr7-122127919-2	5.42454753891499	0	1.39832426219487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53123628-2	2.91548881927076	0	1.45223119920935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77801382-4	5.86248401324236	0	1.36861440434991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66114117-2	5.67168406056394	-0.554967586904435	0.778913030293837	-0.712489797089515	0.476161527264716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78612360069773	2.06621232759638
Merged-chr16-43106431-2	3.26267003299485	0	1.44410107697408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107696250-7	19.0265125035403	0.19335141209459	0.472208180690441	0.409462224504201	0.682200483399967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12172425098412	4.15293638440765
Merged-chr4-151068923-3	4.39328825089533	0	1.37384719134615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67212878-3	7.86006233218414	-2.32597698771061	1.06246753285697	-2.18922170869171	0.0285807295414759	0.411131503127691	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61076849167644	0.465515277017237
Merged-chr8-104219995-3	5.5989612604061	0	1.39916662594662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44656763-1	4.15045296472961	1.21130053288059	1.29707765758454	0.93386893668056	0.350371504110723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.788686275880602
Merged-chr14-31685834-3	5.93242251380626	0	1.36259682921015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33986593-2	4.6390498031457	0	1.40292478083912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3387482-2	4.26246012516117	0	1.37936197774081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8948421-2	5.69124120210431	2.43655445820448	0.988219793827176	2.46559973137979	0.0136784090739601	0.250667103623785	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.84535741655012
Merged-chr2-66101179-2	4.03130689082521	0	1.4098115174906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56865736-1	3.2754090855376	0	1.38628180999856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92998712-4	11.3249895913131	1.14230159350937	0.474425860522593	2.40775574976267	0.0160509155344394	0.278579731014237	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33108913876853	4.4439978956478
Merged-chr11-43384603-3	5.53206862431123	0	1.37578333045556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94418189-3	4.33331098344642	0	1.39486293804519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61056967-4	5.20278359687377	0	1.37403693340794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32396014-4	10.4859066304097	-0.49355700262399	0.628267839708201	-0.785583745386717	0.432111390315981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67600721765121	2.67871502843084
Merged-chr5-105648947-5	22.2547081009372	-0.13476624124551	0.389884508813443	-0.345656824518758	0.729600635372445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13056890029452	4.53077568373884
Merged-chr3-22034756-2	3.69348806367056	0	1.38391649125571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95617046-4	6.39438590893201	0	1.36506401889527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72534264-3	4.46747573623592	0	1.36392072735517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54544961-3	5.31416282495462	0	1.3952758894209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106668411-7	15.9472874212466	-0.626858893586588	0.454741904411448	-1.37849379506361	0.168050882299758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.417917107713	3.76818231157576
Merged-chr15-81568827-3	4.91077310926837	0	1.35706627389101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-26022843-1	1.75318003953097	0	1.56628963143344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134144889-7	14.2743829960444	-0.728888522159319	0.562711949529242	-1.29531374403742	0.195212019840613	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39476780404895	3.29191399825627
Merged-chr2-145885393-4	11.8315971384811	-0.934234510278639	0.634448133961603	-1.47251518330603	0.14088180996503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97241508637328	2.93087439630729
Merged-chr7-38085616-2	9.79899331176138	0.179284419180044	0.569114420971694	0.31502350419084	0.752743808011599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78350304080024	3.96375200572213
Merged-chr9-7914698-2	4.33088781945945	0	1.37018951982758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45699521-1	3.06800133497226	0	1.42708334985552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70674701-3	5.32924764126981	0	1.36281994570808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63119066-3	4.72995321831298	0	1.37816964918386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127278512-4	5.29438425047992	0	1.35528681194132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77887100-1	6.87153914435083	2.66904186846363	1.00674003265699	2.65117287669539	0.00802127728655112	0.173056254496079	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	3.10470906685842
Merged-chr7-58837033-3	7.39197793407695	-0.644107719034309	0.791378622110861	-0.813905886560679	0.415698868179357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50670197153503	1.97919011379029
Merged-chr9-85368544-3	4.43017880215915	0	1.38775141150977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64398888-3	4.68688305525183	0	1.37033900275212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53090563-3	5.2300856386705	0	1.36978732953212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33079667-3	5.56407504964029	0.384807514558171	1.07841479258226	0.356826999411563	0.721221322459378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	1.13743241080208
Merged-chr16-35922521-4	5.43372975625568	0	1.35542224428611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66343429-8	20.7735019799729	0.522407775285245	0.48145542135842	1.08505949275901	0.277895306579887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65517921459824	4.24490621871432
Merged-chr3-104541497-3	5.03852265167074	0	1.38175603917385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88656190-4	6.22369500511497	0	1.36552437746944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36914315-3	11.5453404113466	-0.0145719550750272	0.625663410139102	-0.0232904063732725	0.981418624244751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29299838501832	3.21023658445132
Merged-chr8-72486002-4	13.4240911085002	2.37329094581473	0.505181577541305	4.69789685792864	2.62854104272752e-06	0.000290416387279726	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57137791780664	5.30490228252423
Merged-chr9-62510766-3	5.36916868930759	0	1.39111780832726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121251394-4	6.31147904138806	0.624271813874546	1.36827883202693	0.456246051069699	0.64821305361548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr2-71047480-1	2.09819609949955	0	1.48805359345507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115170687-1	1.20611371884741	0	1.63315131961605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51460231-1	2.58506835299816	0	1.4486038451451	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155018662-1	2.83988357979634	0	1.45109918537012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10724242-1	1.56777796431541	0	1.46386876546553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102242555-1	4.6588592345401	-0.410721919184447	0.898469760452546	-0.457134939051896	0.647574058544656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00129118555875	1.41398715281163
Merged-chr6-119859187-2	5.71133536171348	-1.43240021219764	0.943702099919405	-1.51785209794486	0.129051688067375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91526369906289	1.34883400838639
Merged-chr16-43841486-1	3.03869982237507	0	1.42183705485791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33595549-1	3.74025527576056	1.4053994321265	0.991109302873189	1.41800649842787	0.156188867527739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	3.16873256838222
Merged-chr19-56400432-4	5.92216051029163	0	1.37303704564628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142902890-1	1.87080886257699	0	1.54894131984019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80250024-1	3.08014301405587	-1.56133372396466	0.989102636670843	-1.57853559992505	0.114442616302892	0.987771702065563	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83977088234384	1.06872581468896
Merged-chr6-89430962-1	3.3798887396733	0	1.38426407823294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61329264-1	1.37885132938848	0	1.92807600554991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65787582-1	2.6750621568709	0.573234697211413	1.21473787168017	0.471899914027165	0.636998229437687	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	1.17858215524007
Merged-chr2-128764231-3	9.0914469954038	-0.960686330427442	0.850982282205064	-1.12891460905404	0.258933857354918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64506176629191	1.60310561942228
Merged-chrX-167104465-2	1.94619711757662	0	1.58049068511655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142698187-3	5.17831455240689	0	1.39241006521155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157232603-4	8.32179791444073	-1.36732654415765	1.04186410706267	-1.3123847293411	0.189390356678477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16448544747254	0.730937814817307
Merged-chr2-80132920-1	3.34316365555394	3.70667868668342	1.30606126213543	2.8380588216995	0.0045388817279737	0.114918058617104	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.8090753758428
Merged-chr6-125471570-1	1.52828140989295	0	1.50459197396165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33227198-4	4.54951572809006	0	1.36519648325852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37924186-1	5.20686903932108	0.211987000129708	0.793953613265919	0.267001744922732	0.789467817595666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19193974227778	2.40130849348195
Merged-chr14-76287334-2	3.22352326922188	0	1.41272901418208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140722918-1	2.14335535515198	0	1.48497771034657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3629029-2	4.23359645267206	0	1.3968331871089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78769176-1	2.74568465141278	-0.517795503145608	1.28589800828905	-0.402672295786943	0.687189317207681	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84022605426951	0.838451940269823
Merged-chr3-99981221-1	2.50204506915373	0	1.48554660489003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128630244-1	7.39502672817073	-0.821367079733272	0.561456877553523	-1.46292104090393	0.143488985830255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13997687761156	3.32927670008207
Merged-chr11-54998917-1	2.63585537824265	0	1.40328797957801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-30624084-2	4.85224400149838	-0.224745690823561	1.08124315259829	-0.207858602649629	0.83533937345109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26637849737819	1.60294768781932
Merged-chr15-8625574-4	4.78038503254865	0	1.36272953787894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-70650207-3	7.57430679941391	0	1.38392178255518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63906682-3	7.43221348767077	1.75847598603701	0.763861480537501	2.30208752613057	0.0213302367300591	0.334994793170718	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	3.09775800762702
Merged-chr10-80955843-4	5.36145412873852	0	1.37482319976127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92127466-2	6.33067433726715	-2.20561619605584	0.969882203447659	-2.27410729696399	0.0229595360795167	0.35415931377595	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54352955995151	0.723581231604105
Merged-chr2-52784133-2	3.3764615257487	0	1.45521854155585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24609037-2	5.37589713585992	0	1.38588405749002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12220585-2	6.53976537507763	1.3919116525355	0.797101769341916	1.74621573564523	0.0807734715155753	0.79898642490556	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17543988140679	3.29623377052597
Merged-chr19-47932478-3	3.5737881374929	0	1.40345434839358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-56569174-3	5.82071330389403	0	1.37175285197286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149049745-2	9.08382421506341	-1.07190128166816	0.647004934644013	-1.65671268374163	0.0975775774218044	0.896794283352958	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07098251396438	2.6614780620219
Merged-chr6-47317390-2	4.20441720966102	0	1.38536667751071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-55017778-3	6.31261823986303	0	1.36963236234854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28081247-2	4.64899338940717	0	1.36562586313869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19162580-4	5.61977703901282	0	1.36123449307756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24727686-4	4.52967258769966	0	1.38294030787642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30003343-3	4.43521833029371	0	1.36656208349413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176996910-4	7.1599573318074	0	1.36336842590281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46376538-4	4.54887038548166	0	1.3764396518192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80416828-5	14.1637771812622	-0.0874684724039305	0.559774545483149	-0.156256609218333	0.875830756974005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66906077036531	3.64118415524687
Merged-chr8-14988971-6	24.8417975244354	-1.16931269812945	0.379478227617476	-3.08136966242014	0.00206050663759359	0.0638945124432116	C57BL6J_F1_Control-BALBCJ_F1_Control	5.57360362518469	4.55996397291595
Merged-chr18-4312121-3	5.06141238390177	0	1.36650569916447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13639703-3	4.96971152826041	-2.49993584151048	1.26745256725642	-1.97240978171037	0.0485628460944407	0.578655798081478	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr2-84557379-3	9.09053524343168	-0.092633218067101	0.826196376972208	-0.112120097169365	0.910728182660172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76302217368042	1.20194974038739
Merged-chr3-145963751-1	2.42254623436712	0	1.41214111697037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144973475-3	5.17739846165508	0	1.374049392176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100439555-3	6.4353738330228	-0.407830022311897	0.847954298275042	-0.480957550591498	0.630546668821221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90896656829731	1.81350735141944
Merged-chr5-77358524-2	3.38664391329409	0	1.39739941873318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109433157-2	4.38922912186251	2.14861406524575	1.06572724610668	2.01610128022445	0.0437893862183158	0.539272144413555	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.46657426367291
Merged-chr2-167798136-2	4.44084169226848	0	1.38042011363838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85489884-4	11.8231462400863	1.10690298766063	0.598631201292938	1.84905662329314	0.0644496369371821	0.697058856798305	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49772695277398	4.06676568200191
Merged-chr13-76844821-5	11.9606958679371	0.101639251544082	0.487565058625895	0.208462952268426	0.834867506978881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64549478249635	4.8795529993002
Merged-chr4-137578385-6	15.5369460738232	0.596810929282136	0.472799113838886	1.26229282545887	0.206843437383003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59854051378723	4.17119088674493
Merged-chr15-81046314-3	5.04834670996027	0	1.39034866171025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58210187-2	5.95898495476379	1.06350187562737	1.4460497479999	0.735453173100269	0.462063548520201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	1.08593863411001
Merged-chr7-96409054-9	27.4313242228851	-1.16651961430444	0.452614331328285	-2.57729270498586	0.00995775886106209	0.200553469406622	C57BL6J_F1_Control-BALBCJ_F1_Control	5.9360430990882	4.78780712890101
Merged-chr11-76475556-1	6.106129494732	1.02064768260157	0.859473731443372	1.18752632600827	0.235020078751764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49353333163368	4.25971347565085
Merged-chr4-13099055-1	4.34661541135607	-0.677745040100806	1.32344356765875	-0.512107245569811	0.608575953871414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.465515277017237
Merged-chr1-165717255-1	2.88673221240506	0	1.41677557215678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98031460-2	3.4005261028863	0	1.38715682200171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12760950-2	3.94597092446579	0	1.39811949232601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50117582-2	2.86438767878606	-0.187543715882371	1.20692385924851	-0.155389848701098	0.876513986525499	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.10056930386922
Merged-chr4-148165103-2	3.8732575865593	0	1.38570880382382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99365137-1	2.34008129076575	0	1.48435737692705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83855380-2	2.68712742721532	0	1.4062703678429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124620043-2	3.95512980330717	0	1.39592650657906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12836677-1	3.14922484103329	0	1.41453965146308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72019068-1	2.08081486835855	0	1.49664930926149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84587703-2	5.52767939111474	0	1.37605488105556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38956100-1	3.38058521331393	0	1.39660580165062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5131864-1	2.10031058754833	0	1.52665444923159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28882541-2	2.81749271337952	0	1.39429831062818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93013143-4	8.37228765935298	-0.213519614291097	0.713615320770838	-0.299208282216329	0.764781130314739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18171748210167	2.42342003899653
Merged-chr11-40763588-3	4.3548451453016	0	1.36851806396562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43075929-4	11.7616784124714	-0.129817429410111	0.451228927516432	-0.287697488998825	0.773578312287671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58084911434972	3.68502730872579
Merged-chr8-122269577-2	5.03070191066437	0	1.37462973030369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96883617-2	3.72941563847046	0	1.39647181831103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31898496-1	2.81432127294602	0	1.37674431095916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96431919-4	5.75136044063615	0	1.3631644371586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142912929-4	5.60289938102405	0	1.37065496867873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156455693-2	4.4443596512393	-1.48272928610908	1.26072010400222	-1.17609712211463	0.239556067816157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.465515277017237
Merged-chr16-23376363-3	4.43257449968891	0	1.36731270421673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163320694-1	1.97462488469915	0	2.41060276291556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158316580-1	2.63379786301741	-0.0351805535540617	1.4793053236457	-0.023781806900661	0.981026651935957	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.303163067301871
Merged-chr10-87853543-2	4.7542880791819	0.407091577632726	0.76439483632499	0.532567147614334	0.594333248617899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41564793337539	2.78071598812731
Merged-chr12-102356018-2	8.08756695084049	1.32127863032634	0.769338035635324	1.71742273113433	0.0859019613248231	0.827200126776981	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64538595732494	1.85514990253484
Merged-chr9-64740845-4	8.26020080252349	0	1.3594920387445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-92772543-3	10.6801732039394	-0.439835870138524	0.565177344247118	-0.778226294127973	0.436435618272341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79332946950708	3.35926371558025
Merged-chr6-5050040-3	4.96880551879838	0	1.38651108472092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58548241-4	13.2561513514026	0.320005387386606	0.629202646356817	0.508588749967102	0.611040516204247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84561691906514	3.57998574413516
Merged-chr18-75462772-3	4.70320539766276	0	1.38176832056243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61895081-1	2.45204564350371	0	1.42279128484002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39955703-2	7.27024850930889	-4.02796875058905	0.980176118245188	-4.10943367789896	3.9663060251437e-05	0.00273609681752267	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66806820620963	0.67591700901439
Merged-chr2-127322612-4	12.801069243598	0	1.35233994353721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115573298-2	5.39601877392634	-1.37065859909087	0.885509447683818	-1.54787574844744	0.121652214531483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	1.45224061799255
Merged-chr2-166553659-4	4.9477748570019	0	1.36017540813601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35433650-2	4.31360511696762	0	1.38490960509894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13798959-3	5.43202172817798	0	1.37588555540168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84627372-5	21.2297188983946	0.860182373788255	1.00422997531524	0.856559149728862	0.391688570088668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.62830504494315
Merged-chr13-75796288-7	11.794520676475	0.099129721901752	0.511430552928474	0.193828314194627	0.846310315905465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35809947377024	4.13370912179351
Merged-chr4-119082833-6	13.7532296440808	-1.09546572751359	1.24319304470074	-0.881171055600053	0.378225242924447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr2-132217274-4	5.01234429121589	0	1.38045934291822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73462996-3	6.73325351510905	0	1.37894819898801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71378197-4	6.91154332161709	0	1.37977405293901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84657498-4	4.73309382766326	0	1.37051692917446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36319729-1	1.65047912504354	0	1.52408123583486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41619734-1	3.0351804523122	0	1.41542796986806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79600492-2	2.673239533044	0	1.54149248328134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-56013384-1	1.58956959855346	0	1.62759718182333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27407144-1	2.93698165316461	0	1.39743226143914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48426436-1	3.72723949652662	-3.76385625910123	1.2369699366283	-3.04280334359674	0.00234385451568975	0.0702923233984543	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47304157811658	0.376242425970964
Merged-chr1-128106466-1	2.36417468811622	0	1.47790466901281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16167627-2	5.10050908748112	-0.389834609128675	0.740825000358855	-0.526216864900401	0.598737537550875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75033869392915	2.00766992357472
Merged-chrX-71270900-4	4.74255083795901	0	1.3772090366283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21387552-3	4.1094182820388	0	1.38539131392808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62744278-1	3.27988528048094	0	1.37783648183604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-93307626-2	4.25701978783894	1.75766180552877	1.35425131881646	1.2978845071865	0.194327024599576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr13-85629678-1	3.30979163472662	-1.24412787486876	1.21666001215639	-1.02257644899801	0.30650814951393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0.55634759613363
Merged-chr5-113919521-1	3.97756960761225	-0.450821828282036	0.909663845808403	-0.495591674176517	0.620182528141579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67300841487975	2.0616452534421
Merged-chr15-76473793-2	3.71861710863208	1.71162813546244	1.28949223323058	1.3273659905452	0.184387644150424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr17-67114927-1	1.00342480572622	0	1.83242787237673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34905570-1	2.15220283831466	0	1.47727307372706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111054059-1	1.52893314556101	0	1.51797318517667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-103803731-1	2.57447424737062	3.16782826475615	1.54687067486301	2.04789470524851	0.0405703177902551	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.33506233738039
Merged-chr3-97666358-1	2.82275738878996	0	1.48695614532437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120123309-1	3.75504587586574	-1.3772613333293	1.3320386429266	-1.03394998384081	0.301159546078608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20180876945005	1.79255381327846
Merged-chr13-113337467-2	5.1550449298241	0	1.36670212785111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46227477-1	1.46324851734426	0	1.61021228509258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51792741-1	3.85866635550401	0	1.38600259943342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17899902-1	4.83624529442346	-0.138416074119012	0.68369287147704	-0.202453586827635	0.839562139385767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80193137221517	2.50224139847084
Merged-chr14-54807404-1	2.21815936221542	1.2885279739442	1.40660478938899	0.916055443337371	0.359637815890139	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	2.04612129124541
Merged-chr2-19505921-1	1.5143693516725	0	1.63452647883465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-151745578-1	2.76728582963708	1.19900720878131	1.23699868979985	0.969287371658668	0.332401828273011	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.42614485211135
Merged-chr17-84318642-1	3.13065396711639	0	1.41484937511314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25827376-2	4.9892874513142	0	1.373403940016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46908371-2	4.11812980574462	0	1.38611539433596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-24596441-4	4.46335212903737	0	1.37983463754733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37050078-2	4.01372957200715	0	1.37178022038233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101974357-2	4.09520948975075	0	1.39567850544246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47842901-3	6.87973673073613	-0.379092770646609	0.771179011840917	-0.491575580800182	0.62301940960781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84793875274919	2.47938055603667
Merged-chr4-138062347-3	9.41633208586771	0.275286563815746	0.638683472159131	0.431021900230348	0.66645244659444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48727730032444	2.67038772621452
Merged-chr8-14561373-1	5.6910133483134	0.277952475007653	0.864721306718043	0.32143590408636	0.747880078004003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	2.60219362730004
Merged-chr13-60508424-2	8.81994433617065	1.37047868678371	0.6373615604463	2.15023743481496	0.0315364384616662	0.437541924026982	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24287124256397	3.69948264507933
Merged-chr7-16932167-2	3.62385274181339	0	1.39110530705447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74964441-1	2.44046765216245	0	1.39948364999414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47356620-5	22.2970389691968	-1.08178411627556	0.485092195298098	-2.23005879451593	0.0257435398920846	0.382975666391304	C57BL6J_F1_Control-BALBCJ_F1_Control	5.69014871235417	4.10296516082786
Merged-chr9-40638501-5	18.5924377209854	0.877620072168307	0.451870670890429	1.94219304040893	0.05211373530519	0.60660611080403	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2009771897579	4.23853336418739
Merged-chr18-4343448-5	11.1420013343719	0	1.34785301589304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120830525-3	5.72008003500266	0	1.3802852407358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43399494-3	14.9799049186528	1.41461272254887	0.530627569163715	2.66592390738074	0.00767770685909011	0.167542425835445	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90803963492279	5.24373519312468
Merged-chrX-94152866-3	5.70667943020768	-1.00565213910861	1.16168986389356	-0.865680394023606	0.386665454626529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.67591700901439
Merged-chr9-74825279-1	2.24767296067158	0	1.43498529783068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16123321-2	3.27783625569652	0	1.41390069601659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84032788-2	2.8556591679444	0	1.42505518852555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166185614-3	10.6999917658961	-0.0765468089354162	0.415681064716436	-0.184147933194008	0.853897404146748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16012553731332	4.08343295455749
Merged-chr13-119838124-2	4.42390442238719	0	1.40131560831017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85351242-2	3.2437174679359	0	1.42662938154172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98947425-3	5.6367410269069	-1.9127775578619	1.11169626403291	-1.72059367270237	0.0853245824298907	0.823975657542446	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18646137299356	0.465515277017237
Merged-chr7-142278440-1	5.29454022696113	-0.429416708433282	0.801155463884791	-0.535996729462527	0.59196081079001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28109213962751	1.66683653681755
Merged-chr13-46975131-2	4.12277869956565	0	1.37776393266485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23272250-2	4.44001484193852	-0.0398466549296741	0.904775993222679	-0.0440403538866523	0.964872237306673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62815048690431	1.60509146778397
Merged-chr15-82417732-3	3.8006032704803	0	1.39050332859993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8199300-5	14.574010773326	0.121674748598798	0.593084108102953	0.205155975242683	0.837450264463941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8963576733768	4.38684127925582
Merged-chr7-99263684-2	3.73004936193654	0	1.41532998710999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29044422-3	8.71418395260859	-0.545181598436942	0.67177567789368	-0.811553047211135	0.417048142366284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83609659800677	3.06811353022134
Merged-chr17-12031491-2	4.1161159083047	0	1.4230695855961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31787588-2	2.95321531460493	-1.35299307924703	1.40715783819997	-0.961507687707428	0.336296961934173	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr11-107316099-1	2.52075794761291	0	1.41115535193466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127129794-4	6.76462226209162	0	1.37880488910057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8323382-1	3.21780089598148	0	1.38401438794392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171238658-2	3.5345040168053	0	1.41400036992724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106760378-2	5.41788673116217	0	1.39974942031599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63038217-2	2.63712615193837	0	1.44193140961901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191180009-1	4.84766005983941	0	1.38297339949272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70885796-3	9.65466755387135	-1.10678546155893	0.607307092545414	-1.82244777830611	0.0683870706471682	0.722511999504046	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96376400089799	2.47481144691616
Merged-chr1-87149530-3	4.73043582097467	0	1.39668713917642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25059507-2	2.72857864138979	0	1.4454995010272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81137567-2	4.55824786020375	0	1.39272520406375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129615979-2	5.09085683944136	-2.02143477227766	0.996848935757296	-2.02782457779522	0.042578154977576	0.528788194294278	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66397071612377	0.841757702988201
Merged-chr13-105139962-1	2.01295685419982	0	1.44623171463021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143510631-1	2.65104534886847	0	1.42655267850999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119895178-4	11.0497926813071	-0.189530952756881	0.572907474728202	-0.330822970754218	0.740778208805276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37214678959593	2.40075328899663
Merged-chr6-122724849-3	5.72937408747818	0	1.38963633407684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83899755-3	4.18669557332987	0	1.37701005455062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63078192-4	4.75736503859853	0	1.41516962259759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136636776-2	5.25419397223551	0	1.36178414443902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132969502-2	3.92979123145587	0	1.39688027507935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40236786-2	3.71476484599796	0	1.38278590345072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53872095-2	3.87371105735319	0	1.37647072764149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150220806-4	5.35187269221823	1.76646018048736	1.26115640555289	1.40066701696127	0.161313670196713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.904676873936758
Merged-chr9-96350198-4	9.56397604900538	0.466702842647762	0.609766584048593	0.7653794990684	0.444045597025435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80415269990625	2.97411735743648
Merged-chr1-55809389-3	11.911392470873	1.78660178165973	0.605856979566239	2.94888371664685	0.00318923950616265	0.0893167801728468	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35287325867535	4.4651268031735
Merged-chr6-140815916-3	4.11092276174232	0	1.37150273970048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28623152-4	4.43165202085824	0	1.36314856561887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24380074-3	9.06758125866394	1.11985700896005	0.769204818844376	1.45586322592528	0.145430433280583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73830414206781	3.01614957321096
Merged-chr4-19681639-4	8.58245997529323	0	1.36813512595851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79680695-2	4.69307180030226	0	1.36046915994201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60612331-3	4.39890122425251	0	1.37966141280472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97075192-3	4.65835499455894	0	1.35940842020425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145793436-3	5.75987837382563	0	1.40584717607305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130139556-3	5.68818997146189	0	1.36752515243861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15831974-3	4.68011324869302	0	1.38347016078445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67246071-5	9.15636044639768	0.726868561315297	0.668998673314372	1.08650224628133	0.27725684765067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09282686802642	3.05153324203823
Merged-chr17-88190954-4	9.67598034274903	1.54431372262197	0.797465772629615	1.93652665183315	0.0528032315791089	0.612533261931025	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	2.07516627220713
Merged-chr2-122408694-5	13.1816572504955	-0.183837599938982	0.532875459159003	-0.344991680099359	0.730100625523635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80244064000398	3.3825627243092
Merged-chr1-60940181-2	6.53072968167798	-2.82755508337389	1.04704414665459	-2.7005118097534	0.00692328790133824	0.15514320838605	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5281157213591	0.601513806634888
Merged-chr1-95449414-2	4.22062674848121	0	1.37060262189816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44778037-2	4.19574502830385	0	1.36721132295614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-30930378-3	4.704393110834	1.05328945736642	1.07515058285336	0.979666917513152	0.327250561327433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.39284430389808
Merged-chr10-94537273-4	5.45085679289994	0	1.36695096972632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56425700-4	5.64095747488286	0	1.37122950185931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102755106-4	6.77209992119524	0	1.39499786228352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17280136-2	6.52621468661119	0	1.35955711463304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42855418-2	6.4962858392006	-0.552301022997896	0.909254177843698	-0.607422034955816	0.5435708688564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	0.788686275880602
Merged-chrX-85919180-4	6.94828744507396	0	1.35742229972392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8650638-1	1.79547297185255	0	1.5236494785059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123344611-2	2.68776434466859	0	1.48703498986651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-166183286-1	2.23082597800826	0	1.53151227647129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133471090-1	4.96556166467511	0.285113521450138	1.48706605817675	0.191728887820699	0.847954576551971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69204862343741	3.3973440063527
Merged-chr4-40774887-1	2.93779099877982	0	1.39836306257263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89112367-1	0.968487471511266	0	1.96258483463876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145758794-1	5.31553219256377	1.73271117737535	0.890829118008014	1.94505449176367	0.0517684202634781	0.6043985303055	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9001726754443	3.62023244342316
Merged-chr13-68787220-1	5.75322053983066	-1.19662193155131	0.860821083148307	-1.39009366171059	0.164500437741715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24406464734385	2.73321588508411
Merged-chr13-37452611-1	2.24451562758834	0	1.47523442955102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44988602-1	1.80534509722041	0	1.54236904421881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-56541228-1	1.85728774602665	0	1.46503553666402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81209127-1	3.19684254205523	0	1.40281927272668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28894530-4	4.03602888090496	0	1.38656907152803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99957683-1	2.31064542906582	0	1.46083528849177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33075148-1	1.4415170011708	0	1.59644704068035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-36158391-1	3.06055187994344	0	1.42206392804685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96255476-1	2.48902499062149	0	1.44574663014653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26587358-2	4.99564015672841	-0.808507987009175	0.978947525564442	-0.825895122971994	0.408863587413592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	0.730937814817307
Merged-chr2-125280832-3	4.81973989029671	-2.52141619534501	1.20073548077329	-2.09989313693069	0.0357382426246141	0.474290803425634	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	0
Merged-chr6-46454522-2	5.66569443243024	-0.0207944256065231	0.93945744990318	-0.0221345049833456	0.982340662216349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.28311275482176	1.16492870185157
Merged-chr7-16190529-2	8.00792951711009	3.85600297767525	0.948505438702177	4.06534619659256	4.79612148477337e-05	0.00319892475816927	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	4.48727708995627
Merged-chr6-133138215-1	2.99756015406902	-2.04312499075469	1.43896314546743	-1.41985915149412	0.155648690134281	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20385331986326	1.18909650862134
Merged-chr3-96284662-1	3.39670972279888	0	1.44227517133227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19807561-1	2.08317648247207	0	1.44957145931074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142054292-1	1.91485045155842	0	1.51734614213909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65601016-1	1.32036025963198	0	1.76533063827149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58614123-1	1.64068670540954	0	1.56359380249274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100021784-1	1.91261074942897	0	1.46112781791812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69054076-2	1.81109839916811	0	1.57697758796782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24154655-1	3.14639018804759	-1.08817896323308	0.997144098083872	-1.09129559641796	0.275142834805121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12695852494485	1.39293125551424
Merged-chr9-120586760-3	5.05913940020439	0	1.37265966656804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15685383-3	4.26092383381845	0	1.37816573896211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11824618-4	11.7689457687822	-0.981434170513256	0.535653291516012	-1.83221906045903	0.0669187902307525	0.712843135048692	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19100321806316	3.27681344134956
Merged-chr5-110636099-3	6.51389971130542	3.50372254638946	0.912889743378882	3.83805664572495	0.00012401187814014	0.00705880804588467	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.94039166187179
Merged-chr1-186722096-3	5.53333381927129	0	1.36950341323341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129033620-4	4.91898410561412	0	1.37097318718566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30204552-4	5.46542848595034	0	1.38725997833892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-20497713-2	4.8702789340701	0	1.41589855258529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-75445935-4	4.96112100730575	0	1.36858700136793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14187092-3	4.15065999118372	0	1.37398621414486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31754810-2	4.43781782633317	0	1.41307698237306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129790126-2	9.84099536676279	0.642428530236343	0.616256833730147	1.04246881344549	0.297194377122011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55449967496659	3.5201587772926
Merged-chr12-102567109-6	18.5023572974358	0.098853652748311	0.50387792611702	0.196185718056944	0.844464806183093	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46432071445819	4.19266882505125
Merged-chr7-133154128-2	3.23831056183539	0	1.402222893138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35076744-4	5.8288952581056	0	1.36378823583312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43672607-3	5.59442987962399	0	1.36629709107299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191403302-8	14.6646320078102	-0.820674664331877	0.417947150902859	-1.96358477993937	0.0495782638657234	0.586384866291745	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62684259973326	3.79774583801561
Merged-chr19-34519420-3	4.75846605829894	0	1.40070979619535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125141665-3	8.48827061929391	-4.25757400159876	1.11778757536641	-3.80892943831758	0.00013956977691295	0.00774170765633781	C57BL6J_F1_Control-BALBCJ_F1_Control	2.481957134649	0
Merged-chr13-51881985-1	2.8397887317099	0	1.40069898167439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37062489-5	11.9523285929886	0.827912963063802	0.658174557353122	1.25789268791138	0.208430568480217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56773781410272	3.55302701842695
Merged-chr14-95154846-3	7.63908630942541	2.32032435147107	0.687444431977325	3.375290050422	0.000737379305038606	0.0284681829847966	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32253008702474	4.4599378571545
Merged-chr3-9914741-1	4.37901008517944	-0.624861549150641	0.841513721351745	-0.742544694514202	0.457757382784774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80725200154661	1.74571508595899
Merged-chr7-72162482-1	2.17051888078837	0	1.64547047516674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88539043-2	5.08254155381969	0	1.41354952963523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110363879-5	12.3349637232391	-0.74271015263806	0.534502156753099	-1.38953630636356	0.164669728689114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79694067428239	3.39008446295746
Merged-chr12-110855574-3	3.59579662568284	0	1.37566456736826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45102315-1	1.72071964730169	0	1.52334316231427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-123187177-3	4.16488739507766	0	1.39714039458267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14587436-2	4.21531423070979	0	1.40544908893859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35536242-2	3.60232947195302	0	1.38761353701756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45663447-2	5.34216556856179	0	1.37389785264054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115717975-2	4.69209381165999	0	1.36435560600929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34175073-2	7.55578742749306	1.0695425274867	0.83711306185404	1.27765600158941	0.201370745273639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03670253366966	3.740902752022
Merged-chr2-90501901-2	2.69254517046969	0	1.42641701389964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70994788-5	12.4097995726618	-0.762244841400081	0.655553021434476	-1.16275086297695	0.244930598573221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91222743482579	3.850948306753
Merged-chr11-103382892-2	5.1325628490794	2.15490051512897	1.28474378645355	1.67729981483502	0.0934838687704905	0.872542861005339	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02748994520012
Merged-chr2-164372825-3	8.69650703245185	0.531723345169871	0.918569524365155	0.578860207165438	0.562683502317558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.44790810950236
Merged-chr11-4527295-3	4.92365989847061	0	1.35922404995639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46876141-3	5.28396554643036	0	1.36384941597855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136750157-3	4.24826720293517	0	1.37278943559953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21998837-2	6.04137097461399	0	1.35901663710856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100605187-3	8.38668468105125	-0.407413310016259	0.761440487919426	-0.535056010916208	0.592611126770566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0438339302262	1.82011828833849
Merged-chr8-56067062-1	3.13165515386515	0	1.45217456466508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95180680-2	3.58238639463109	0.960677065951822	1.11857777242129	0.858837972322952	0.390429914594848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15025660736152	1.39949824061849
Merged-chr12-70107105-2	8.35720380535347	-0.920863388254814	0.599556679511337	-1.53590714560191	0.124561155372754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72269260972448	2.41387450741157
Merged-chr4-150210542-2	7.76350445633967	-0.114124707686124	0.722957746178999	-0.157858060570345	0.874568646431997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94623723803635	2.75026362956382
Merged-chr2-155249749-2	3.80115190274002	-2.23256334106326	1.24079970685888	-1.79929389789676	0.0719722028456324	0.744497997047713	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86231980429102	0.577068348605183
Merged-chr16-32703529-2	3.36702097865477	0	1.39365430617711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-5274538-2	2.78190905339058	0	1.41660199454547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27790803-1	2.21804454658627	0	1.4663819257726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16016981-3	8.6163586390661	-1.53111186515522	0.740686173465073	-2.06715329650664	0.03871971139302	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54314374101268	1.30064958020929
Merged-chr9-13466593-3	6.71156485604207	-1.07868015061277	0.612194737250746	-1.76198860424205	0.0780712228890744	0.78250833073672	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46967715556574	2.15162704854195
Merged-chr8-119831639-3	6.95671179746016	0	1.36836784870702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96873276-2	4.63602323462372	0	1.36720644335489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27221845-2	7.4187563848933	-0.531390099250635	0.84519692550383	-0.628717501467327	0.529534018202086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	1.39949824061849
Merged-chr14-54735254-6	11.6953217951247	-0.1486519017402	0.535700049284529	-0.277490924144466	0.781403173791316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90749534007917	3.84842480230557
Merged-chr9-45312036-3	5.7505215995415	0.00828683359398254	0.913891545599794	0.0090676334997101	0.99276517437131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61425725761568	1.71403462318148
Merged-chr11-96860756-3	8.49632515532282	0.940193794824695	0.636734306732009	1.47658730632902	0.139786296399826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49898368658353	3.30175144675328
Merged-chr14-55736493-2	4.58016601678315	0	1.39909012505731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94476947-4	4.79030958120593	0	1.3784053799779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17186413-2	6.10444164631958	-0.273835667837421	0.818949636588941	-0.33437424672168	0.738097170279444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82866868473699	1.47792296811651
Merged-chr2-130302475-2	3.23706161722747	-1.73944150710595	1.22797173508459	-1.41651591596783	0.156624507570055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25739071366548	0.921168194051549
Merged-chr6-66946089-1	3.68775752680077	0	1.42368417574641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87302130-3	5.4663112080135	0	1.36819047161243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36224795-3	3.5621484202228	0	1.37915368855463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65141149-3	4.14485467816158	0	1.3870636293156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55442200-1	2.66011355608442	0	1.48225537675876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30431979-6	16.3962389755055	-0.542859996486942	0.613499270183185	-0.884858422610428	0.376232994895667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89473179459799	3.31680516249849
Merged-chr13-63140020-4	9.96434553608769	0.74313829267226	0.649967343703303	1.14334712331561	0.252894497061475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30081306793583	2.64691113686359
Merged-chr11-55005176-3	4.4335332941044	0	1.39662806412114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166730406-3	3.67728016615037	0	1.3790280777676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56404747-2	2.66509462050349	0	1.42349328076568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33271954-1	6.32984301187875	-0.0369954918037348	0.744003310693293	-0.0497249021234339	0.960341611977582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59989886154962	2.57446609168857
Merged-chr6-47780626-2	7.65435853342209	-1.22701737824685	0.726650259754755	-1.68859415072798	0.0912972323887976	0.858175039844829	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4129085652566	1.55424902326769
Merged-chr3-127323034-3	10.2278558564911	0.460512843109321	0.496726502564712	0.927095374882532	0.35387701732478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6642034643686	4.09659254243856
Merged-chr15-61541046-2	4.88947728259762	0	1.37336427765193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80147948-2	3.05322812714276	0	1.38141110702797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86739111-4	4.85283868150475	0	1.367185670113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84087731-3	6.21398656006265	0	1.40403681133859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32007049-3	5.46537526804304	2.34614080246526	1.19813662471628	1.95815798805152	0.0502114771275491	0.590789707155089	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.730937814817307
Merged-chr1-88253602-1	3.23246392117138	0	1.37806033748142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44274914-2	5.01134350264758	1.0882746448228	0.967075403399397	1.12532553407663	0.260451113396204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13132003301738	1.97941593292252
Merged-chr11-115083578-4	5.1885497448805	0	1.36074132742656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-64941627-2	3.97183320241222	0	1.37943562595826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27974778-2	3.57324727782464	0	1.40645297559778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9098428-4	6.9199838445425	0	1.36034167205826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93069511-3	7.34357959861193	1.93154169077854	1.03616671565905	1.86412250228477	0.0623045031888859	0.683651693347729	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.97731223551783
Merged-chr14-14603672-3	6.11381178172266	-1.05771484645954	1.02240306072393	-1.03453802819272	0.30088470839284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.577068348605183
Merged-chr4-20065649-1	4.12597420537808	2.17485981803484	1.2745785113882	1.70633648582865	0.0879454486364899	0.8400327960694	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.765562747387088
Merged-chr5-68012883-4	4.8411659076	0	1.37546249253372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9619665-3	11.3449021503157	0.413547316345445	0.545093542152542	0.758672199109846	0.448048671335106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32617013525489	3.87857385209565
Merged-chr9-78522045-3	7.20268294963948	0	1.35874191587907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25331243-2	4.14388613944187	0	1.36905085039053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80812706-1	2.48187810770594	0	1.44834009561739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53452018-1	1.47176334675859	0	1.6230957271199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62956962-1	2.31369147136931	0	1.46312109060675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57522345-1	1.89212242041104	0	1.53822531056446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50866049-1	3.98478295241154	1.01737614058877	0.981120416535039	1.03695338863885	0.299757580614497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	1.74828283775632
Merged-chr6-92944386-1	1.21078028767742	1.13868020697016	1.60195743257949	0.710805533163662	0.477204751369479	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr14-27131660-2	2.24529091762734	0	1.49432300268848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-17823338-1	1.04571807476192	0.117062421083359	2.42731900471939	0.0482270442639622	0.961535297053713	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.577068348605183
Merged-chr11-46895537-1	1.73368557344934	0	1.62554850958957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142384379-3	9.68198047349883	-0.660250176931951	0.644877110516997	-1.02383875340626	0.305911442649841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28434001305746	2.57652457044436
Merged-chr14-55608955-1	1.79405270508925	0	1.47395484642828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31586678-4	4.24708515799321	0	1.37114608525857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99179338-2	2.70376851249585	0	1.41169358158558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45955944-3	6.16940257621301	0	1.36485294725613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29572476-3	4.37794925026342	0	1.38124065515687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25158444-1	3.04535982350381	0	1.46901086260817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47274079-1	1.9604993727035	0	1.49745246093718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22851556-2	3.33081736220258	0	1.38954597849621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109212309-1	2.02597242151141	0	1.44054674990738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129803017-1	5.06129554408743	0.895278215237893	0.986949842070765	0.907116225237413	0.364345338773051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	2.29110297178667
Merged-chr9-42896656-1	1.69091560462816	0	1.48575099456357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82633355-1	3.99782537814379	0.257359957764216	0.824794868987176	0.312029047998621	0.755018447539936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	2.33386953669033
Merged-chr18-20971333-1	2.28231403575158	0	1.56635753543061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72753065-2	4.97888263343984	-0.0353801840980412	1.18417767743609	-0.029877428676619	0.976164807118686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.897114879832661
Merged-chr13-113613061-1	3.69717559185948	0	1.41283504584246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120247656-2	3.00074620910707	0	1.42062524501634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46172044-1	1.36846585787083	0	1.58548669841786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68738854-2	7.49905362284063	0	1.35202107599247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78858611-1	4.47490716923335	-1.93904577680601	0.791650510860938	-2.44937096635895	0.0143105974361119	0.258699622889793	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37493801129544	2.223031893319
Merged-chr1-86398563-2	4.40803444694257	0	1.4226910458534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-11665275-2	3.57926043220173	0	1.38249929462852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-105762294-2	4.32586709577801	-1.87311767186268	1.26568066681725	-1.47992911717054	0.138892164202704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr16-38106692-8	15.3077873255697	0.652164570059971	0.479190105211791	1.36097253045684	0.173522370523593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72978091692342	3.91644050288208
Merged-chr7-34380489-4	5.5446028085392	0	1.37015478622705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110666117-3	5.81846494454596	-0.0381560731107569	0.860967529215831	-0.0443176679909281	0.964651188490263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50954942419772	1.48988962528534
Merged-chr17-66107083-3	4.36678202670206	0	1.36217433561346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30849904-4	7.45640323239245	0	1.3806475874501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-129978754-2	5.47194255800071	-2.82328806671682	1.23006997368069	-2.29522557832121	0.0217202000553456	0.33986423569618	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0
Merged-chr15-59705829-4	5.52986502167891	0	1.36472333648587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89268980-4	7.27130391327763	0	1.3530379887535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113727195-2	5.31430831709747	0.748204640961406	0.998319119431079	0.74946440111033	0.453577347285192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.33638302378291
Merged-chr2-124910006-3	7.40146028970402	0	1.36135943611115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67260032-2	3.61482915902727	0	1.38153750931846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64047069-3	5.53931739002904	0	1.35717028379394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110258488-3	4.54565470171508	0	1.41574980345502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35741047-2	4.9035095539143	-1.771875989328	1.30777186546056	-1.35488156315704	0.175455294602172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr3-86842777-1	1.75083836709689	0	1.45401845912843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25206040-6	19.3042247889735	-0.27415219346461	0.523518191708965	-0.523672716261629	0.600506195443763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29604044143714	3.77456548670069
Merged-chr2-13559501-3	4.25791642056026	0	1.37111927648497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36323920-3	4.71759106369653	0	1.35908839536706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3620667-3	4.31418756796695	0	1.38030672281126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66277891-2	3.87878527280879	0	1.37434636011989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-48488530-4	16.2633835746713	-0.750279660037743	0.509242342669019	-1.47332536431556	0.140663324540774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35947214506059	3.40755157241038
Merged-chr15-67301854-1	2.28096600983765	0	1.44375958279445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-84544863-6	13.8285583828356	0.778374995297428	0.461520140937256	1.68654610331134	0.0916906629713695	0.86112867112313	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84400700934354	4.65731688337804
Merged-chr3-105045568-3	3.81127024905352	0	1.36813579367079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139832295-1	2.32197695010672	0	1.40653754053225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87742223-4	7.23538661593411	-0.0370016724401736	0.930380432221763	-0.0397704757738864	0.9682761145206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38353752608252	1.36637784713012
Merged-chr10-67625547-1	3.00202456258172	0	1.4140396861977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58595101-3	5.69123478349566	0	1.3761441643171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87023330-2	5.57079769326744	1.77624786428199	1.2016166877652	1.47821504342246	0.139350228613206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.18984215491549
Merged-chr6-72101094-2	3.79323952430852	0	1.43098979905663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129905001-4	13.4948842258384	0.472796602052655	0.471289510860498	1.0031978033829	0.315765432635515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22806728239309	4.65977624528086
Merged-chr5-73133987-5	12.1358032275388	0.112373307028042	0.654437734929947	0.171709699838855	0.863665759713377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23894488376075	3.75533920891337
Merged-chr1-156010606-3	8.64902795071908	2.25756357268084	1.16780986224255	1.93316022211496	0.0532164632619378	0.615651156249193	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.74618975104912
Merged-chr6-5583179-3	5.67962110024178	0	1.36157535178054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111724849-1	1.85198769420807	0	1.45422784044826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72597965-2	2.97298590417456	0	1.47353122580194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13396217-1	3.07359040478626	0	1.40940668694258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-29903561-2	2.68158035513638	0	1.4390370082549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8255582-1	3.15179416394193	0	1.41453948233468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36918111-1	2.77769945274857	0	1.40623259899759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82953021-2	10.0555891955516	0.696127360064379	0.660638583584303	1.05371889768764	0.292011634299468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72321832238862	3.91544580202971
Merged-chr4-65562636-1	2.00113673682388	0	1.52398572652483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83812150-2	4.41138445579801	0	1.38630328714701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122824666-2	3.82165480973005	0	1.42109436083885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122810323-3	5.53765616731848	0	1.36047220377917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40479923-2	2.42698593653835	0	1.46092339460582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114224681-4	6.32246212694769	0	1.35929704566745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51908359-2	4.37541762238954	0	1.37762518497208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86852393-1	2.8354331726631	0	1.37904062474045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78523514-3	6.53071194548944	-1.69323387316823	1.08646404933222	-1.5584812716159	0.11911920421603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6995072319729	0.465515277017237
Merged-chr7-127229078-2	5.35144468820139	0	1.36128685538847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63581361-2	2.2213210972913	0	1.60231870714483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41049501-2	8.70073775314096	4.58793506094812	1.06116101374388	4.32350510575339	1.53569582409639e-05	0.00125910843592844	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.97442502673334
Merged-chr19-57436618-2	2.0582700267119	0	1.47553373603761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73528581-2	3.58299137214462	0	1.41125645151885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99146896-1	5.19398868933434	-0.94406430995125	0.764987637501237	-1.23409093646918	0.217169020489249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4780911357035	2.19776446004195
Merged-chr5-119240781-1	1.81757454980964	0	1.5512162617168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53108964-2	3.3180119117523	0	1.43299174842495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37778918-2	6.93070854570696	0	1.37797230324526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55377921-2	2.59730788426193	0	1.45508901202977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27561806-2	2.38620483999593	0	1.4450271217871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27283571-4	5.54171239664659	0	1.36820835484839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100936321-3	4.86626529405219	0	1.38945023872117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25535598-6	15.6135410714817	0.0522168999671763	0.467958041599397	0.111584576661421	0.911152801682516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9258474097067	4.43442177231607
Merged-chr12-85487972-4	7.58463861548003	0	1.35266515450661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99904566-2	4.22257314255566	0	1.3738264927173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3803727-2	3.63655484557831	-0.0254716315658613	1.39964716367047	-0.0181986090687769	0.985480412255884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.788686275880602
Merged-chr8-16429954-3	7.13573570258586	0.335722791807534	0.792355439620976	0.423702261661921	0.671782965555209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56376965164983	2.50287224925689
Merged-chr16-49766513-4	4.80530860324954	0	1.36383590506023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-73564636-1	3.87174369781702	0.747074341509437	0.984850465282783	0.758566267514457	0.448112057818046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.33245162145219
Merged-chr10-77537763-3	4.20985302314063	0	1.38494906136558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81833241-1	2.91793987439131	0	1.40153821416259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12011052-4	6.27014802165422	0	1.36060072462131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91959170-3	8.27844981235332	-0.164044074758871	0.68193842326756	-0.240555553348705	0.809899601920306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16454203713377	2.03925338927869
Merged-chr11-57934464-5	15.059419067966	-0.379447671740069	0.468802123099172	-0.809398364562866	0.418286042614154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.121138130281	4.0514210262432
Merged-chr4-43741989-1	6.03713612441514	-1.28652506664737	0.703095240182197	-1.82980198573664	0.0672795537772092	0.715284424755587	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57629785625868	2.1158827559191
Merged-chr6-108721776-2	8.81948712699512	0.422274187769846	0.704001219946562	0.599820250030105	0.548626036184313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29666818073796	3.02952723293659
Merged-chr6-71196280-4	4.50305822094188	0	1.37150775403565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116098740-2	6.67490290096481	0.267884432111504	0.849473212766368	0.315353595717421	0.752493195817338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94975811652544	2.14082803845303
Merged-chr1-155391702-2	3.61448724187013	0	1.47665360618438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109629008-2	4.83061621579938	0	1.35893280201194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116669772-2	5.82113243008066	0	1.36699786450847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121464127-4	10.4782784777548	3.00684005219878	0.712269860146331	4.22148994424815	2.42692783667151e-05	0.00183229680935592	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60230598860646	4.52372743972333
Merged-chr4-46356943-6	10.966375884422	-0.91472949135599	0.748236149540671	-1.22251443199787	0.221513149641801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12921398847593	1.60310561942228
Merged-chr10-68176493-1	3.27014192566757	1.21453835979978	1.20534526197543	1.00762694151988	0.313633590090179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.18909650862134
Merged-chr7-67441429-2	5.4226634636009	0.194297585393956	0.974166255564886	0.199450129055527	0.841910650778901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.30064958020929
Merged-chr2-102914333-1	4.99336371439143	3.64456115672042	1.06887830596866	3.40970635887085	0.000650328579725407	0.0261473456104241	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	3.15072845593055
Merged-chr19-53107086-2	3.77702593802324	0	1.38761096988457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115313046-2	7.1558468101252	-0.318188287917586	0.678358986483459	-0.469055904406957	0.639029676845939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93016308902745	2.68078947292863
Merged-chr1-184606070-2	4.72418378909348	0	1.42275743250675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113505268-2	3.03068458692127	0	1.39305787263836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166154356-2	3.89698925499774	0	1.39946168304449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81176571-2	3.36798987393106	0	1.41034978400771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106299523-3	9.99741085712828	0.0327247185631778	0.79450314138121	0.0411889102241777	0.967145294530514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	1.80346354702228
Merged-chr6-97402734-2	4.08096358180031	0	1.44863531130168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57740873-4	4.96042110309194	0	1.36978211748526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17178068-3	4.03367778207011	0	1.38713819531263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31235243-1	2.95629337443104	0	1.39771236047832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12004870-1	2.12873498437295	0	1.43799428012704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77827572-1	1.94810324834731	0	1.56196844224151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49794558-1	1.30574794404775	0	1.49827895715973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38573586-1	1.34551830156693	0	1.64687738505757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19142719-1	2.11033371156339	0	1.61182361988631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110382501-2	3.76147051697167	0	1.38497855576377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75767739-2	2.38078089396179	0	1.52771320608894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119830764-2	6.36823264042008	0	1.36300156637696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82108954-1	3.04787224473991	-1.24481418774139	1.46387355823967	-0.85035635812583	0.395126991906855	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr11-103053387-1	1.47595842923447	0	1.5636295050796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8499529-2	2.87567630172187	0	1.4778155340902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116169221-1	4.63474569502194	-0.133124411395999	0.866946734255934	-0.153555467868801	0.87796025187516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18291157746898	2.58456732057756
Merged-chr4-138866576-1	5.04718701542948	2.10777685868458	0.971228143099398	2.1702180622137	0.0299903303958802	0.423019289465407	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.64546612406046
Merged-chr10-67643866-3	8.18732143139908	0	1.40336867345536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-93030871-1	3.52336359827251	-0.60263200949368	1.3127196250069	-0.459071379762844	0.646182908362058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	0.662147012823607
Merged-chr4-109546697-1	3.1762493844283	0	1.44149353642642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82921586-1	3.24671744392164	0.261360683578514	1.15287628988865	0.226703147484937	0.820654579497459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.46460328489499
Merged-chr2-12371637-1	1.34769626720196	0	1.57457586362256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76833097-3	3.80120485265514	0	1.40174937388306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63907310-1	5.96648848430235	-0.352372591048999	0.82302447634069	-0.428143513563179	0.668546638318428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32152722112794	2.36581634083611
Merged-chr11-114981217-1	3.73746620946827	-1.35304703206937	1.12698177275628	-1.20059353645108	0.229908909524332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43863395111552	2.73467554547099
Merged-chr8-46742753-1	2.88881378972166	0	1.40694040744364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84204286-2	3.11882255929723	0	1.41443009693973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148867776-1	2.85523103732706	0.55094861423425	1.3124329345689	0.419791823050542	0.674637538881911	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.67591700901439
Merged-chr3-126651452-1	2.895805772253	1.24403017436793	1.28596222731539	0.967392469190171	0.333347873319403	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.11005512232597
Merged-chr1-165780576-2	6.83980870326576	0	1.34879655708006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37130798-1	2.46001957975462	0	1.45331664647175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73426015-2	3.34557501170468	0	1.38516907823308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-107990011-1	2.26981466985649	0	1.46809301582064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21866728-1	6.18391355815317	2.37395392563544	0.744662717112478	3.18795861680941	0.00143281041076083	0.0477243511755808	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34557707159302	4.11048664596172
Merged-chr4-83262386-1	6.21557414392027	-0.0290395732920309	0.779405950515529	-0.0372585983887126	0.970278816254369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85971213640217	2.82554544186453
Merged-chr8-36260658-1	4.15943123299907	0.998225198310091	1.0058982057601	0.992371984156977	0.321016100226505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11038056962808	4.02760548221479
Merged-chr11-43492888-2	3.22823628876463	0	1.40023515298283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29855188-1	1.84588827996793	0	1.42131559275454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65820083-4	10.6688696001716	0.249376337446773	0.695582016892135	0.358514641538589	0.719958212755199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37816961274976	2.93056451870097
Merged-chr6-145747353-3	12.9455998354129	0.295070620015148	0.555836812024747	0.530858362799496	0.595516932863409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30826573864485	3.62724060465327
Merged-chr5-63821362-3	4.68059375315729	0	1.37149490612955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97444048-4	5.68606857595188	0	1.37285683461722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13560188-2	4.64360077011769	0.943158606701085	1.12981931822767	0.834787112846149	0.403837583108912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	1.44790810950236
Merged-chr8-121898696-2	6.45439317028877	-0.0715835309187828	0.856431401108725	-0.0835834963852465	0.933387588991347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51967923719821	1.677060521814
Merged-chr6-108447775-2	4.28171734503514	0	1.38987618333433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32623979-1	2.74384282258997	0	1.40344631004369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62687583-3	3.6798527171772	0	1.40354821313619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115333878-3	4.70835561660279	0	1.3862731539495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115823998-4	4.4305783021883	0	1.36882862161472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19024679-1	6.18234898524466	-0.385248885497932	1.08035913292694	-0.356593352854995	0.721396254420016	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.97019877533161
Merged-chr8-126881236-2	3.80707420235596	0	1.39534408883287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57745307-2	3.488837266411	0	1.44968148156169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8842071-1	3.38334415773116	0	1.4207512396542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56808719-4	5.30150876130995	0	1.355461713927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158506805-3	9.23140109769892	-0.00210939565693509	0.665220750524488	-0.0031709709224674	0.997469935498199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68099393481061	2.37002497856059
Merged-chr18-9790613-2	4.99325995377591	-1.83517917464357	0.905328097370163	-2.02708739513827	0.0426534757176311	0.52899846829448	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27620127671797	0.788686275880602
Merged-chr11-89090584-1	2.36128109483271	0	1.51503467271203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11761820-2	7.70965535874999	-0.605764652710022	0.90332047736532	-0.6705977201766	0.502476835261991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	1.19124681800816
Merged-chr10-75227212-3	3.3534231416103	0	1.45364593785426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72260096-3	5.00323359062176	0	1.3725484648137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67124330-3	4.69321174897353	0	1.48056267325101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85873953-3	3.33734377281187	0	1.44281331491954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33010194-1	3.75607924306015	-0.89200512846651	1.20989577871265	-0.737257823492551	0.460965575512277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0.716426531808663
Merged-chr1-135112858-2	4.82075052883545	0	1.38648944391719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170937258-2	3.38233561030201	0	1.44062854429544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76674082-7	25.9333144168338	-0.276095469716228	0.423187669016343	-0.652418512944822	0.514131224759818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65521611849038	4.3654800191245
Merged-chr11-83687324-4	4.37205830511746	0	1.36731572832055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46864159-2	7.34668831157868	1.59367622269778	0.821546515634818	1.93984904368602	0.0523980383392736	0.609132798563853	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	2.80223655967717
Merged-chr8-108731042-3	4.61811106103411	0	1.375851568971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125314319-4	8.51708217840422	0	1.36524250572799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78908107-3	4.40091384035472	0	1.40243440488636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55153079-4	5.31653563830034	0	1.36828757425597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44635377-3	5.2015017510029	0	1.37225918325113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54219008-2	4.66181628752389	-1.61299224781986	1.16484409778286	-1.38472800857213	0.166135651366921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	0.577068348605183
Merged-chr9-8017447-2	4.36774128989437	0	1.37976481346109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100410239-2	4.15308224269515	0	1.40523784281903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36999447-1	4.97333628921259	0.563300816970629	0.979880683967727	0.574866742642292	0.565381423719353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	2.36325837532821
Merged-chr12-110687023-2	4.03694964327474	0	1.38767267327287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59634161-1	2.07891426317054	0	1.42632366762932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-121423974-1	3.9054360059092	-2.67077240054134	1.16722275003928	-2.28814285915133	0.0221292030311313	0.3443805747407	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	0.303163067301871
Merged-chr9-75049297-2	7.42770145831561	-1.39480029791495	0.672283957558198	-2.07471899668854	0.0380125857190605	0.492099582544037	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47159008109517	1.97656658922368
Merged-chr15-57762367-2	2.96364178545733	0	1.41609049835164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86923801-2	3.81107102616216	0	1.40642205305092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117438319-2	3.71290187555674	0	1.42981404893482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87613537-5	14.2525053322415	-0.531332241811823	0.44305481915791	-1.19924717853582	0.23043184737967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31647137603392	3.76873030430425
Merged-chr13-48981220-2	5.19956595332114	0	1.37150133609564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84330063-2	4.42148593875196	0	1.39568359051327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67698726-5	11.3930955128682	-0.479098464971489	0.652903096976618	-0.733797200825112	0.463072346825618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42760559021134	1.51118621810175
Merged-chr16-30602886-1	3.41574496914953	0	1.36625333068695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63144314-2	4.60992605475872	0	1.39850167834676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134292297-4	15.4075768257869	-0.177596891102836	0.464035387339147	-0.382722731818375	0.701925357888798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99929276287373	4.70648496362448
Merged-chr1-39944538-3	4.98307029289963	0	1.37250300478894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3771268-4	4.77841731184047	0	1.37986280095636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46137349-3	4.72745020784501	0	1.37142720194897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112001190-2	6.79022803858134	-0.18995884402235	0.703519101869341	-0.270012347237771	0.787150754577073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66739880572649	2.11912641430171
Merged-chr7-64404191-1	2.88861955073333	0	1.43797242646274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151096123-3	6.38805159983078	0	1.36548483986831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107067469-3	4.01041282306206	0	1.39917862844108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33443233-1	4.92817625025164	-0.764904432612612	0.803748672381779	-0.951671161516127	0.341263779273877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	1.30139522650344
Merged-chr2-181675629-3	4.73385292193475	0	1.36900331727314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24381554-1	3.99764619066597	-0.452181592482347	1.13558566354914	-0.398192410310208	0.69048836009878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.859510663435501
Merged-chr18-67183181-5	19.0695196972484	-2.56492823133252	0.566637237612438	-4.52657901930343	5.99461903706715e-06	0.000578794842337359	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69869990927066	2.35740836713395
Merged-chr3-68713757-2	4.96100299680052	0	1.36556571338247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152474791-4	5.35338109321722	0	1.3709798874976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46936240-2	5.04138248099947	0	1.36479561536388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65205616-2	3.2509503240879	0	1.39470738350061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169795103-2	3.42911521881841	0	1.43656290510532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99298914-6	12.7932697925704	0.278269334211577	0.601267235985794	0.462804752291793	0.64350432454593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21142567839502	3.39084714698791
Merged-chr12-41186173-2	3.68150599855067	0	1.47802659283862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88185373-3	6.17253999617143	0	1.39319431892305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61802035-6	13.12904685759	0.733195965809678	0.587896086741172	1.24715231542692	0.21234165353524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28672609952657	3.75940220537492
Merged-chr1-153910599-4	6.215046502047	0	1.36294716445557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155094221-4	8.37681077497604	0	1.35724446566233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125745018-5	14.0207699621039	1.00195483659176	0.63044304472405	1.5892868435567	0.111995647661521	0.975167613524364	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05801908341688	3.26988395675859
Merged-chr13-105306212-3	5.22373891054914	0	1.38599649007031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17724723-5	25.17044875186	0.482283229069659	0.337229300441079	1.43013441726107	0.15267844380385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99292422908067	5.39717907728925
Merged-chr8-128453077-2	5.85320139964017	-0.695482161153257	1.37223616495151	-0.506823955611046	0.612278346211145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr17-10232622-3	3.73588615708378	0	1.36464655674925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59235791-3	6.49019896969894	0	1.39872267050304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165948281-5	13.8221700900388	0.230270756957912	0.531263877963968	0.433439513788156	0.664695499534593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90924783284374	4.17124256868168
Merged-chr16-89774511-2	4.94471716183248	0	1.38074391062152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21981639-3	4.70807531897512	0	1.37565057407785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81067281-1	2.52734919523283	0	1.40898670497519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94149884-1	2.84085583262972	0	1.44165767496685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126574835-1	1.04370353432575	0	1.83845999006265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90551709-1	2.14122488771062	0	1.54909845790848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106305575-2	4.26547140097408	0	1.38598804774029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-37246772-1	2.64466922630585	0.833857952986573	1.94647885460467	0.428393019021997	0.668365006332384	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	2.23112039637829
Merged-chr4-102691612-2	2.51402786575382	0.612139429856812	1.49003630707669	0.410821821555322	0.681203191014081	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr1-39594690-1	1.31350607643213	0	1.6132466981893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136899308-1	3.58289338293112	1.79124562325334	0.977024898422728	1.83336742609637	0.0667479483822028	0.711860256250375	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38860239282551	2.73687098509407
Merged-chr11-4083557-1	3.39383262910856	0	1.37966301284139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157371517-1	3.77594670661998	0	1.42965896842979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143220760-1	3.2176135152668	0	1.49750962509274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117444505-2	3.34131934544803	0	1.41288827295529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146094207-1	3.06788575996755	-0.461239289445083	1.22453360287081	-0.376665277591196	0.706422369939887	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69442907999601	1.39479953640345
Merged-chr5-104033214-2	3.37112740829236	0	1.43447119485334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35034866-1	1.87995948604778	0	1.49729177824173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4938683-4	5.09030321257254	0	1.36628671093284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79915293-1	4.17289677768966	0.336971327251866	1.10680208766698	0.304454907527473	0.760781341669248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57387282706098	3.0817838108736
Merged-chr14-58319394-1	2.58575954243994	0	1.41380206532858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-138827974-1	2.38648575676321	0	1.40774173548221	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41891516-1	3.12026656432121	0	1.38088723805157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172348742-1	3.27196567780765	-1.78650865066966	1.11038305153751	-1.60891203102924	0.10763557838577	0.954013110300358	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84215379444533	1.04506147362244
Merged-chr8-61451459-1	1.79684486094629	0	1.4920023628629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5668446-1	3.55601265241729	0	1.43937425354246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-141048455-1	2.48376006780734	0	1.43223822861719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33067991-1	4.78014705554691	0.0818464062337191	1.07886915717954	0.0758631440050509	0.939527979149759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57625825553269	2.86757247887116
Merged-chr7-66136437-1	3.20603320014496	0	1.40560754548776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76605333-1	2.22920346677887	0	1.45529727479348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108112329-2	2.82633420387692	0	1.40428082720193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143316008-1	1.95314114356423	0	1.48843651680192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101753932-2	2.15843674385163	0	1.46889288467024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51867659-1	4.14367552959838	0.384522485515671	0.990003830697481	0.38840504813478	0.697716309033109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	1.737158151675
Merged-chr4-40997796-3	4.49372734575041	0	1.38331369854994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52029359-1	1.52172967612165	0	1.46839085730811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60864586-2	2.90682924155879	0	1.56282073585576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114229452-1	2.52071945206877	0	1.41775645673506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82934448-1	2.07806490499381	0	1.46829761196032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142103470-2	6.00365191503737	-0.908833820779923	1.16261418664688	-0.781715749917961	0.434381643475781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.679405493272835
Merged-chr8-90824453-1	2.3080849413829	0	1.44520134646385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20861369-4	5.49790427783516	0	1.37714284185426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54231490-2	9.92757590739879	0.873988866485587	0.523073712394653	1.67087132420482	0.0947470966776313	0.879921072699026	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20013369860462	3.98639108390557
Merged-chr5-16470506-1	1.83968653851085	0	1.54250913370803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113805160-1	1.80931259745902	0	1.47709458135391	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90024400-1	3.8677531705116	0	1.37809458111915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23861257-1	2.73490081169061	0.220428342401385	1.79782387490015	0.122608418699317	0.902417187590266	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56763655772049	1.51118621810175
Merged-chr15-79757286-7	18.1668701096666	0.935623038245963	0.555672028742352	1.68376846386087	0.0922264241132947	0.86377260309693	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68895368771448	4.228810564467
Merged-chr7-139296588-7	12.1882992216305	-1.41003512462063	0.858086009777011	-1.64323285609453	0.100334764365048	0.912972456665493	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22781771998735	0.765562747387088
Merged-chr19-56256966-3	4.08477191793019	0	1.37733107043696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139636643-2	10.0507531325055	0.506867109932147	0.695605654894078	0.728670197497645	0.466203427217599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19442297417859	2.89545625484702
Merged-chr10-59310839-2	3.8338994780553	0	1.4610695628785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34789220-2	3.40687959650413	0	1.44316932237918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67210523-2	5.03536287730321	0	1.39817733406552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79362600-3	4.54401599206697	0	1.39421453833471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26500485-5	12.8002762623902	-1.37536487496265	0.655724596041706	-2.09747336498442	0.0359516925709205	0.475343066241845	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06304005252398	2.78969832313398
Merged-chr14-70959018-4	8.6057383033865	-0.430665886696236	0.673200227328825	-0.639729265102992	0.522348626030406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59774523910698	2.44047047748797
Merged-chr2-58281269-2	4.72795680182776	0	1.38900383413364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48829847-4	6.58370454245914	0	1.36562765137168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-127440729-5	13.0399336798857	2.82222786569266	0.687624079007459	4.10431797235252	4.05509408844564e-05	0.0027832179236593	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	4.43934302241166
Merged-chr6-108246587-2	5.51287221372533	0	1.38110009543574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86538190-1	3.39269666224972	0	1.40015424771138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40765274-4	13.417010919965	2.03811674511965	0.595786362456829	3.42088519232821	0.000624176755286734	0.025282879463958	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34016897559916	4.2049165246126
Merged-chr7-4293034-6	16.9238312137796	2.75828354568052	0.673982169122397	4.09251709028464	4.26715783535736e-05	0.00290560134606685	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	4.52796172400291
Merged-chr3-133757985-3	4.743915158015	0	1.40067807784821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165679777-1	2.62624176394168	0	1.41881397424039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52283628-3	3.90791753536554	0	1.37726534339585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80833828-4	10.1693652444525	-0.18863528916939	0.714227498036137	-0.264110930604139	0.791694441453162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72949239720653	3.64227449731785
Merged-chrX-109185262-4	5.00425657785306	0	1.42961004635313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54353479-6	10.7479045773076	0.0491088208139234	0.574247921159873	0.0855184999446456	0.931849188518311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56043926935404	2.84005047720855
Merged-chr9-121928687-3	5.51093962125402	-1.07230081777756	0.854100505946944	-1.2554738117017	0.209306809095787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	1.25298535761957
Merged-chr2-158379902-2	3.95219260732939	0	1.38281905300713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47277600-6	14.7913649596412	-0.791703588516436	0.578477097918013	-1.36859971011098	0.171124434687049	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40015988079645	3.03679759843375
Merged-chr2-32854386-3	3.70132966232512	0	1.41311039622265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51044053-1	3.0909350539117	0	1.48614028618552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75695885-4	4.69861155240673	0	1.39105711452372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101364979-3	6.17711933379184	-0.577704689182635	1.02151640756412	-0.565536377981646	0.571708988102598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.06702908365212
Merged-chr1-84437754-2	4.81749295294663	0	1.38507741916898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29431644-2	4.01888213327372	0	1.36837526901623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113612590-2	6.16108597058877	0	1.37957412547337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124683801-4	6.26646843353422	0	1.350945315922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30795121-4	6.56897837680514	0	1.38063538062445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68127342-6	15.6033903437802	1.34724861778149	0.684076496317858	1.969441466025	0.0489024180127575	0.581173270825422	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60978507060531	3.33696291124341
Merged-chr8-84647625-3	8.13013335777577	1.54103544960266	0.785620896269518	1.96155099351378	0.0498147825842138	0.588290716836035	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30670691456252	3.8681305252232
Merged-chr10-96294912-3	5.15399762096249	0	1.36819883325174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84551211-4	15.0879838138674	0.598929740791205	0.493481307276187	1.21368273115967	0.224868901206998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86752336683508	4.48041710418453
Merged-chr3-87361508-9	21.814051419595	-1.00019056661601	0.428643758447984	-2.33338418419403	0.019627990604238	0.316042044210833	C57BL6J_F1_Control-BALBCJ_F1_Control	5.47949689210297	4.50864571140738
Merged-chr15-58272602-3	7.84329573907348	0	1.36219772681433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121505404-7	13.3509108523565	-0.443804148103551	0.554523067746928	-0.80033487138193	0.423516804335425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64870829608822	3.07007314069442
Merged-chr14-73473768-2	2.96436151060373	0	1.39107477684713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25546284-1	3.02812290252417	0	1.40195077711381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98128999-3	4.74665473404295	0	1.38239927513453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11568147-2	4.78536390828199	0	1.3724979370873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-52229821-2	2.71924247309899	0	1.43317533188669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70500437-2	4.32833509472009	0	1.38428960863034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4948152-2	3.90175831253601	0	1.4320334588862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15012517-1	1.85196247733924	0	1.67527647843054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3535825-2	5.98268473573936	0	1.36630332739998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64865445-2	3.2728415322436	0	1.38729233273877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32013544-2	7.35534076863385	0.272103356846724	0.686509144769367	0.396357949373183	0.691840982754896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67925131530661	3.95269314317774
Merged-chr10-7052428-2	8.64220205126894	-1.22402592581099	0.593678795743808	-2.06176460164362	0.0392301527268808	0.501099718599771	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47894634843816	2.1395254123619
Merged-chr5-142911713-2	4.71997576160029	0	1.38576555596736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57725680-4	4.88772446763445	0	1.373900278145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121819976-3	4.99483662474443	0	1.36964843051214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3079462-2	4.27546538972961	0	1.3904912898504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87369370-4	5.67543472670866	0	1.39163897387804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149120116-1	9.46923206979396	-0.95833659914365	0.554315189472572	-1.72886584626249	0.0838331079639088	0.817304485702221	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25471071506185	3.28840208757557
Merged-chr2-93458508-1	12.1551785622751	0.642409411588109	0.607304566900408	1.05780434826445	0.290144650014331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05088414240024	3.22151968247591
Merged-chr6-134702351-3	8.26715104457075	-0.86932125751459	0.728402830336762	-1.19346221803213	0.232688400542606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98801616977499	1.93957782847288
Merged-chr11-3179100-2	5.17840751230062	0	1.43733982713433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84121535-3	6.8827980420799	0	1.3851431670703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50223183-1	3.23266299623191	0	1.43699745012897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104062025-1	5.72342244377232	-1.8558351035257	1.26218411961179	-1.47033628033325	0.141470699630738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr17-86237579-1	3.46465101338071	0.374548091703086	0.944884090071686	0.396395807315023	0.691813058599072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.71667010510651
Merged-chr16-19768256-3	3.60801330766607	0	1.40145521709819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49045838-3	3.39502795815848	0	1.4454303074271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64098233-5	9.95471827522178	-1.01831093272754	0.641028599723337	-1.58855772295812	0.112160279355049	0.975676053932615	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24469772001696	2.13869887539473
Merged-chr13-81134642-4	6.39129105089049	0	1.38762035662576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-69020789-2	8.43479493819178	0.441646246629439	0.750118631687146	0.588768533366649	0.556016557040223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18625218219472	4.65669179461037
Merged-chr12-11217865-1	2.33891340627678	0	1.43601775805387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117945144-1	2.78839508514324	2.45618694525377	1.22784245056277	2.00040888318203	0.0454561299492989	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14143228603163
Merged-chr9-44175927-2	6.61726065615531	-0.387064772241182	0.918419077293203	-0.421446790262625	0.673428858162725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	1.14478899401529
Merged-chr3-59235614-3	4.97871604840477	0	1.36657538701907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150496826-3	4.05020929038713	0	1.37413545844202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38380328-4	5.96232066987564	0	1.35595038107217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78859949-4	7.14704076937526	-0.0352707562943184	0.678966594032452	-0.0519477049450132	0.958570362514411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66803394061347	2.28284312426037
Merged-chr13-107855753-3	5.45852230494984	-0.472834143218507	1.10259337608127	-0.428838185931252	0.668040987298024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.577068348605183
Merged-chr11-114954246-4	17.2109981413851	0.560865612431467	0.471741937814683	1.18892463754578	0.234469324048027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95258078386244	4.23625986778365
Merged-chr9-13742621-1	3.04910565045192	0	1.49458638980787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92977585-2	3.78507659079057	0	1.40292588824384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60681693-2	6.07870679150287	0.409790191604271	0.756957999174826	0.541364503778269	0.588256368390052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53445394600757	3.03829027618449
Merged-chr13-98683529-2	8.98710827868784	1.8522838890305	0.797109488339558	2.32375089762004	0.0201388488170926	0.32178944234225	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	2.82418271408964
Merged-chr10-83910889-6	18.4661028594973	0.553427363434554	0.456026828228678	1.21358509889474	0.224906200076942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65539681113077	4.22628382455063
Merged-chr11-94277160-2	3.78779439527219	1.81877970459995	1.29256083370658	1.40711342721439	0.159393757188828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr2-103153492-4	7.17227958381866	2.70554746173383	0.932977626569416	2.89990604778187	0.00373274526040395	0.100004090493001	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.75215632473212
Merged-chr5-137823404-3	4.89327134684304	0	1.36924435435662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49101690-2	3.90813702477178	0	1.39517699976999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62106706-4	8.21340085588587	0	1.36937803791318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11973562-1	2.04741219092905	0	1.44711865975894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94614159-2	5.33684621071775	0	1.36373052372206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20794380-3	3.35985302647352	0	1.3926516232933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52750950-1	2.97726477777718	0	1.39768556966128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121426734-1	2.91569623606955	-0.0353092494323446	1.3960236676575	-0.0252927298085087	0.979821472850068	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.600815099743027
Merged-chr2-32325537-1	1.63772376792263	0	1.51084844017011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75563192-1	1.81294235047791	0	1.55949248521539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105893239-2	5.35358169371843	-0.591749570551316	0.769531665111646	-0.768973646413189	0.441908955396697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70313208943897	2.06876131291247
Merged-chr11-115658714-2	4.03605669803724	0	1.38776742260879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79811801-1	3.64091898411555	-0.846911357969912	1.01494368540024	-0.834441723371024	0.404032113951866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	1.30064958020929
Merged-chr3-66004798-1	3.10295281774008	0	1.39459211824554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103720835-3	4.39301953492925	0	1.36194467374695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11773759-1	6.79176775873527	0.053665861958484	0.760400550632103	0.0705757799805285	0.943735387109631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79635897848801	3.41211204759519
Merged-chr2-60948001-1	2.26603389810099	0	1.42974095925436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8736590-2	2.46605311661068	0	1.46844409833306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60017170-1	4.34131251818621	0.145196112466287	0.952315209841839	0.152466442797234	0.878819055741566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42216910918563	2.61468492444094
Merged-chr2-165027374-1	3.17068821698954	0	1.43064857697084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144908276-1	2.0241381558339	0	1.44164663877193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34268332-2	5.33984523179118	0.744428382753807	1.03807351545165	0.717124916176979	0.473297022945253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03577643547839	4.11863456230857
Merged-chr1-20067545-1	2.72113382482272	-1.45246200130877	1.20243238128846	-1.20793653257441	0.227071675981563	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99521245973132	0.990919527803163
Merged-chr15-58775747-3	4.23785665971889	0	1.38772530086491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35870513-1	3.38346876143647	0	1.40841555525434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152724171-1	5.59622078372058	1.43480475107381	0.761366122863625	1.88451351851231	0.0594955479729921	0.662729199234401	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49898368658353	3.15026983139903
Merged-chr3-9724340-1	1.67865108124471	0	1.62122937857514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132807930-1	3.27227638422212	0	1.39683798249326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-81032628-1	2.92804227695608	1.86836790678955	1.33817753466226	1.39620331263528	0.162653279455206	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	2.41713694716017
Merged-chr12-99390588-2	5.72789593620838	0	1.36458352461985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13551713-1	3.05648013281912	0	1.45524210739726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71950367-1	1.41076133067813	0	1.5156922485962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77272856-2	3.3355550240304	0	1.43790101444448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183197736-1	0.996142882336666	0	1.7189086689597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5033932-5	9.82297510136613	0	1.36566363180375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36931647-2	3.38254185575285	0	1.3974665428157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-123091985-2	3.76092298471148	0	1.38643483511465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30210982-2	3.93102014081718	0	1.39610299110646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55737603-4	8.5395990862334	0	1.37310232536324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14781459-3	8.70904137700823	-0.0339201734866362	0.866513163732473	-0.0391455951350195	0.968774309146887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72220530150145	1.70113659014892
Merged-chr9-64222283-2	4.39718045347624	0	1.38217246397748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120098151-4	6.05242646848053	0	1.3606911695893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32093864-3	8.37783023236122	0	1.3509027124845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31011749-2	8.51700899251002	0.492278995555421	0.594463672317273	0.828106103837217	0.407610413049944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76778958584463	3.33280185860513
Merged-chr19-29180564-3	4.30680052218258	0	1.38601549949583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75906098-4	9.07539386516261	4.60460187607346	1.02352484145982	4.49876904746743	6.83480588090235e-06	0.000641680851260744	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	3.96712421209032
Merged-chr16-11036257-4	8.18061493295057	0	1.35262412403245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112252413-2	7.19460814988038	-2.6858777678664	0.810079141487591	-3.31557452884687	0.000914549511204259	0.0334950057362482	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92649120513858	1.13341594473881
Merged-chr8-125184080-2	8.32922281644058	-0.265807054144712	0.665081115436493	-0.399661105954365	0.689406142809014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93857203456399	2.31190137936648
Merged-chrX-94289146-3	4.18318717739652	0	1.36605124328908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3725884-5	17.0853974690186	-0.0461668957941256	0.445052929758834	-0.103733494843282	0.917380844994543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06863864365779	4.09279713520334
Merged-chr16-85309722-1	3.15295766177461	3.47547147439777	1.29099064607198	2.69209655776545	0.00710043847574133	0.158055993080599	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.13118170172995
Merged-chr6-97421862-1	3.13073905484268	0	1.3803670888195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16103093-2	3.76776780726104	0	1.39750386875433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114995016-5	13.764391812458	0.336631195899099	0.464888262446241	0.724112056793489	0.468996943179105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3733725282078	4.62003037535398
Merged-chr17-23706449-2	4.39495306075383	0	1.38399994035843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134432755-3	10.292773415984	-0.318893826198889	0.475752681566616	-0.670293281687445	0.502670849029106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97746106440913	3.46497134643469
Merged-chr3-60582299-3	4.85961235206167	0	1.39819566839644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34242012-1	7.04269721366556	2.90730839895665	0.844810283164332	3.44137430248482	0.000578767306351645	0.0239540167362346	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27256041875316	3.90080265747969
Merged-chr9-64018910-4	9.65253321364553	0	1.34947614867864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56462204-3	5.20861698614475	0	1.36993829480537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117755619-3	5.23280286252879	0	1.37647810643691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103099338-4	5.76645003622436	0	1.36148042933066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46907270-4	9.71704351103362	0.719315260106884	0.632436682287997	1.1373711871117	0.255383146988182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33184672666836	3.72438596951536
Merged-chr2-59211863-4	5.99097392710914	0	1.36262516029332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19841279-8	18.4586647303814	-0.299887706617892	0.531323406023794	-0.564416517732821	0.5724707001526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28906359933662	4.16378690971427
Merged-chr14-79562741-7	12.950060044659	0	1.34367201543463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66886553-2	2.87612983431698	0	1.40201132497976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94698167-1	3.43891732415901	0	1.40617833008944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80636475-2	3.97751248136444	0	1.41678778528347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55778679-3	4.99500400480901	0	1.42400759908029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157201109-2	3.07440239647781	0	1.38936790288813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-71352172-1	2.33859223261576	0	1.58875656127635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98140958-1	1.95738703879476	0	1.4342785450465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149683013-2	2.68530987253109	0	1.42619236964856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85914525-2	3.48176627932606	0	1.40320741914442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-85698183-2	4.04409757263524	0	1.48657505467676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81550392-3	4.98516999669675	0	1.36044735872416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30220235-1	4.4049627691299	0.62483008473451	1.13721159554996	0.549440479836417	0.582703200616075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	0.897114879832661
Merged-chr1-120535106-2	4.79290146849164	2.09634573737997	1.2274541034042	1.70788115952034	0.0876583957317985	0.838541052208731	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr19-17130543-1	2.84062419588618	-0.0179666163652391	1.10576758183566	-0.0162480946813553	0.987036466510521	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.15716269587666
Merged-chr15-31466491-4	6.47309155246096	0	1.36363254776415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76949066-3	6.17900098024371	0	1.35967634105795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104995809-3	6.62183975754618	0	1.36763193921893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37777504-4	8.09907679046885	0	1.36327501034882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81907868-2	4.45224736089054	0	1.36463668455574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-56042504-2	3.75344335403983	0	1.39284185599252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85305170-5	13.4268398604445	2.7323738559817	0.694491165834756	3.93435365401297	8.34208781483048e-05	0.00504975001699744	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26857811924232	4.34595032466462
Merged-chr5-148497389-1	9.93447480588929	-0.0422947234223335	0.651610694804434	-0.0649079638495303	0.948247279732779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92284377699879	3.89984142071076
Merged-chr16-90712490-3	6.66770201442792	0	1.36070969617832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85801540-2	3.68940406604722	0	1.46829100952674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150882806-4	5.8221411823674	0	1.35853645493535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3809003-2	5.63147275876268	0.06090439264862	0.906362666618093	0.0671964930725494	0.946425276939029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91160626283417	2.02640015751263
Merged-chr1-52127011-1	2.76096869372205	0	1.48933193370891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78540617-1	3.61256775994365	0	1.39298928047408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118149219-3	4.21210843724134	-0.0349904430263299	1.25450977344555	-0.0278917261283885	0.977748507470868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr19-46553750-5	16.3769158876853	0.38342209606743	0.494419985596891	0.77549878086854	0.438044985577297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29773833858833	4.61120099773619
Merged-chr4-45441942-3	8.22808711813022	-0.0351257714799969	1.16559133726399	-0.0301355804191613	0.975958924537746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr1-9902083-3	14.6708761428824	-0.784192903803083	0.48669093172554	-1.61127494408569	0.1071198093907	0.951769486542831	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98742715792758	4.20694090627326
Merged-chr7-112056087-2	3.71313179438795	0	1.52775041346215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28321914-2	3.66882532053442	-1.86009067835077	1.29260951270025	-1.43901979683335	0.150144913844912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr13-22015885-3	7.08579988000865	-0.695875693598892	1.3666029890834	-0.509201062164825	0.610611298653148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr2-148558559-4	4.38640819418175	0	1.39006545525609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55315432-2	4.01142928026366	0	1.39161456081652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143751417-4	4.32551288450976	0	1.37432679278513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54611779-3	5.07606385794976	2.95095325036252	1.17481294029993	2.51184946056956	0.0120100308976992	0.228190587056284	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.70266130792036
Merged-chr12-16847385-6	10.7287808524145	0.408835420755257	0.836064375050949	0.48899992985629	0.624841746513906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2972429702454	1.91559961286797
Merged-chr14-30870326-5	12.0278011333907	-0.223986189985399	0.481050790702902	-0.465618588128947	0.641488535368091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21229815858621	4.01196355913523
Merged-chr19-58194116-6	17.0058616759618	-0.962092505310806	0.417937271339303	-2.30200216943497	0.0213350498345633	0.334994793170718	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09263798643469	4.16765644921316
Merged-chr8-94364160-1	2.9644214453142	0	1.37915755251797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22255552-2	2.44588513618052	0	1.44334221387714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38849992-1	1.73027335121796	0	1.48002178133944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64140581-3	3.80714948199283	0	1.44095433403541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-93467574-1	6.33089041381567	-0.160125055323496	0.716071315154953	-0.223616072777397	0.823056056080985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16010405895335	2.69251501153653
Merged-chr15-80040409-2	6.152967885629	-0.141792326278393	0.935162274298088	-0.151623231791315	0.879484108938206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4398829863299	1.90482497882743
Merged-chr8-84558074-1	5.17010374604226	-0.449464950444298	1.17448175083402	-0.382692153475459	0.701948033005994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24687133350373	2.03681675675745
Merged-chr10-69240763-2	3.35726046435108	0	1.40099726354038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128705049-2	2.36130277384983	0	1.51792943561988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88241743-1	2.31882921136617	0	1.47307121273463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83219467-1	1.95798111430181	0	1.50923051527836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116618856-1	2.60185170462028	0	1.48092930687774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84758924-3	3.5363162832734	0	1.41381122581364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56003936-3	6.55288506748403	-1.86225421580032	1.24880574500244	-1.49122809792701	0.135901619065024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr7-68094011-1	1.87963789626663	0	1.4808382073954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152481096-1	1.91497398629506	0	1.52839747759455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24312870-2	3.30617572457291	0	1.44319700054524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79690607-1	2.96936976035467	2.15191404858632	1.23776852809541	1.73854319264162	0.0821151462761048	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.47633894090533
Merged-chr8-84973837-1	6.35670244986263	0.177939452990211	0.727184286265494	0.244696504518863	0.806691434770589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85976690535841	4.08502004874957
Merged-chr18-76254824-1	3.52384335857929	0	1.40622755118289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88301938-1	2.32272731982215	0	1.43602893877032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84203757-3	3.6166069496548	0	1.39567002812055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48285785-2	3.4808686547313	0	2.37351921618917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95799941-1	3.72807773796419	-0.538716781537536	0.953047013113153	-0.565257300138641	0.571898767551456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39633142321475	2.15954689868127
Merged-chr8-46078715-1	3.01223788930197	0	1.46078387832826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-71098161-2	4.91006437275648	0	1.40610739996005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46129738-5	9.65689952865227	-4.8345025167249	1.10978695095079	-4.35624379308392	1.32313402268603e-05	0.00110652680521831	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37607108961431	0.376242425970964
Merged-chr3-41587105-3	9.87811100457841	1.57877189423049	0.766365973833748	2.06007566637214	0.0393913077416526	0.501745985259006	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	3.00146736910618
Merged-chr11-95852272-7	20.7516557993481	-0.691696648176134	0.442066147285683	-1.56469038044012	0.117655525125203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34899684351331	3.78404501977894
Merged-chr2-173586804-2	7.09686635935857	-0.670931973420273	0.705466115222108	-0.951047766779043	0.341580128312248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55248074938811	1.97656658922368
Merged-chr9-78006813-4	10.4283153143686	0.731697458508383	0.680585977208907	1.07509922774061	0.282330305193596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01243752527112	2.90568011711892
Merged-chr5-21129761-3	4.45099563590074	0	1.36999680833117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173492260-2	3.75765479933398	-1.52889099399634	1.37414718096456	-1.11261079975666	0.265875620125174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	0.601513806634888
Merged-chrX-78538798-2	4.11759606273544	0	1.41464252382879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127937115-3	7.42137176511753	0	1.34963606453906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117832374-3	7.34062050315584	-0.552471958443276	0.551299714559565	-1.00212632775377	0.316282583742712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52994528734705	2.56938497650821
Merged-chr5-74957861-4	4.7692320732933	0	1.36965375756773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101802885-2	3.32733019560624	0	1.42603650917496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119366379-2	4.56470350794137	0	1.45681946518634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159061520-2	4.79376130058006	0	1.38202740177556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19291190-3	6.47279281587542	-0.66536551936895	0.652929429517256	-1.01904660640108	0.308180840772688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75601476634631	3.1752008336077
Merged-chr3-54709464-1	7.98419125462577	-0.556499179309628	0.674714310516868	-0.824792316741169	0.409489509457211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6879818684187	2.12452526372729
Merged-chr13-19843548-6	18.0826237140429	-0.330194401948922	0.434781274699399	-0.759449454618793	0.447583739360414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87465453973739	4.55527004150528
Merged-chr1-180794305-4	7.66575134529718	0	1.36477057023364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115033733-3	3.82196258660372	0	1.50824552924331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124618473-4	15.384617106939	0	1.34127694898837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105663421-2	7.22352374480943	-1.29098457346246	0.581898557215802	-2.2185732503607	0.0265157710673892	0.391694077683338	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64663752061096	3.42677013117457
Merged-chr1-166146854-4	4.62521791624261	0	1.40872624341231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142752192-2	3.43813201045996	0	1.39020838938752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70675265-1	2.69846436803867	0	1.41026331610807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42089308-2	3.39070454898017	0	1.3956065191638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119378794-3	5.69205796520021	0	1.38527056768418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118360756-1	3.68948793185395	0	1.41524613217592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31007934-3	4.80039988472958	0	1.3708121771781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15750242-1	2.3692130769288	0	1.45654372962112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98457891-3	6.35426002553298	0	1.36290634675542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-73085981-3	9.37213759550528	1.62719120638317	0.538768351296215	3.02020562727625	0.00252603125452646	0.0745453490579825	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57664716838396	4.35157321642323
Merged-chr11-30268281-2	4.75327657593953	0	1.37297773388892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3240977-2	5.72032729122829	0	1.4036459880736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115007185-2	3.70851945319535	0	1.38844436242001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85343143-2	8.33712255687233	-1.6781936730749	0.792664868457226	-2.11715409608248	0.034246771808163	0.461940513330008	C57BL6J_F1_Control-BALBCJ_F1_Control	3.041117377083	0.887876939341704
Merged-chr5-140411553-2	6.18922412684687	0.416245925036459	0.817127924269272	0.509401175352919	0.610471052659491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98733255708278	1.62671402129372
Merged-chr14-109484990-2	4.71395229437771	0	1.45911394010536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191609233-2	6.45375894171163	-1.17699977695177	1.00898465096654	-1.16651901079395	0.243404666871278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63820361928913	1.25056711339808
Merged-chrX-167172414-3	4.337259274158	0	1.37252123090521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-138919253-3	5.50563827617094	0	1.37179117324961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46522047-4	7.95639475328613	0	1.37067256253194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48097129-3	5.23291995597231	0	1.37121965261012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103310130-7	18.8145401232151	0.170514693348073	0.410857105090283	0.415021892613013	0.678125876667303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72223980548185	4.70442381998259
Merged-chr16-55888401-2	3.21116323649063	0	1.4204276378667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77083102-1	2.38818584774319	0	1.41601381023156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4803604-4	8.84328073646258	1.10861061441896	0.689558182798334	1.6077114913205	0.107898380642552	0.955563387642305	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61518326673776	3.06697956756425
Merged-chr13-119444427-1	2.5721822449621	0	1.45086080966488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15171349-2	3.73237003089185	0	1.41942268280752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114959510-1	3.23300763476906	1.31505612047113	1.08550648918291	1.21146776511765	0.22571618163929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.39020008251549
Merged-chr4-118083809-4	4.80665933383121	0	1.39185374284041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8289033-2	3.54171076406253	0	1.4195626732713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95768940-2	3.53587064976406	0	1.37951609586523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114922387-1	3.0503574576938	0	1.39490063891067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53724368-2	2.29311511907968	0	1.52301646343638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86695251-3	4.8557032750991	0	1.3752998780566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44226049-2	2.99366791721755	0	1.44169178581046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114072134-2	4.41638649931017	-0.0408790835863988	1.27301839948785	-0.0321119345979956	0.97438278588659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.723581231604105
Merged-chr13-8679376-1	2.34397246756756	0	1.42429731494558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64371393-2	3.27715426842995	-2.79687254414126	1.18291598304172	-2.36438815963028	0.018059879356446	0.299577962141303	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	0
Merged-chr6-72038900-1	3.93274716980258	0	1.41062895222746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184067108-2	3.45812413996014	0	1.39820727738258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22777738-3	4.89406012921662	0	1.41034644196384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100148605-2	4.00342188570123	0	1.41121704173532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108316408-4	6.11781155880933	0	1.36512888806371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110783827-3	4.14993778509747	0	1.39325059627231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68707227-3	5.71390834959141	0	1.35511068310881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100617026-9	20.8550355100574	0.380066418727787	0.531183105414323	0.715509237499816	0.474294434919033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62703785442709	3.34483667036483
Merged-chr2-148585326-2	3.77932153299945	0	1.38095830733821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-161512126-1	1.65462125489007	0	1.57972469953148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4310058-4	4.90522173029063	0	1.3911778253709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117198547-3	4.45289165287809	0	1.36939854647993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-78791676-3	3.62222801351079	0	1.38948517591872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67305155-3	3.86703179227534	0	1.38742267358792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78897375-1	2.50508418951134	0	1.43550519529106	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141176363-3	3.60377468507698	0	1.37735670127911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3026954-5	14.0828209179664	0	1.38535335376701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56251280-3	4.40124339735023	0	1.39470340456463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108929204-1	3.84381692815136	-0.365921897434896	1.42911600431392	-0.256047722039588	0.797913988337185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.601513806634888
Merged-chr11-57951714-3	14.954032045513	-0.0285962877117197	0.388207025933752	-0.073662468222818	0.941278963639011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14460884680577	4.16563446859777
Merged-chr1-74784626-4	5.41205269871127	0	1.35884732814642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60771190-3	5.14443461613517	0	1.36043129604512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127480021-3	6.41366664441226	0.408088982367336	0.772151975916658	0.528508629253813	0.597146359368884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.98209264290658
Merged-chr11-76605866-7	16.1393881058562	-0.348311239886281	0.523384216964356	-0.665498172464001	0.505731912062727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31333715233632	3.83773590537688
Merged-chr9-22394933-2	3.80067665882989	0	1.37378816380651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50601826-3	4.92843644233738	0	1.36976155188336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12275410-4	5.06844849360791	0	1.3899521419773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100022217-4	4.96326970683078	0	1.36799765975007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143041688-4	6.45886981037633	0	1.35620918593025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126673253-5	12.7402954809861	1.89116091285167	0.564661698661563	3.34919283056448	0.000810473676010196	0.0306208513146454	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58707500045288	4.36010498338798
Merged-chr17-50098310-2	8.72460333477372	-0.308591532753107	0.869492917207587	-0.354909771714025	0.722657187659936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	1.30139522650344
Merged-chr18-50111785-2	5.84831112515611	-1.14401628289658	0.788871313843062	-1.45019379310853	0.147004485445945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52983342263343	2.09074318537823
Merged-chr5-136971001-4	14.1784606208556	0.0307677089051097	0.499346605081883	0.0616159368902978	0.95086868525428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75030659231378	3.93002331151847
Merged-chr13-5873887-4	5.7464678864712	0	1.41119460177084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67382152-4	6.02736145087801	-0.219330825220127	0.92325560411433	-0.23756240876602	0.8122205093248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.32509503823899
Merged-chr11-58094512-3	9.56716012566648	-0.602798787496964	0.586342045700662	-1.02806679465846	0.30391840892225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84725565286587	3.45998168717325
Merged-chr11-85572198-1	1.71062245352103	0	1.56784436991025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34312353-2	3.36430743382414	0	1.43979877791193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125328802-1	3.86032455563426	-1.24571845689671	1.25455043942283	-0.992960041901402	0.320729427600626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.465515277017237
Merged-chr12-117557078-2	2.80006448834991	0	1.45605427279503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105967220-1	1.91262404260639	0	1.44234699112121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50705127-1	2.49478307184704	0	1.41391255003887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102682805-1	4.12243837389946	0	1.37693431148362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-70265401-1	1.9987946706238	0	1.45249844464924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45079839-3	5.38391340218163	-1.2248367096064	1.07698195914265	-1.13728619055184	0.255418665753511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	0.577068348605183
Merged-chr7-34234656-1	15.6511815894238	-0.28212360691526	0.373880487041274	-0.754582324281917	0.450499632618056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13708587313261	4.89037296697988
Merged-chr14-47367346-1	7.43458862208071	0.152052901083005	0.71233610148835	0.213456682548178	0.830970772794148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72587442728265	2.31977465412565
Merged-chr6-139881019-1	3.38439866026784	-0.658129077200374	1.16244446195095	-0.566159587612319	0.571285299136906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85985322339692	1.90216338684418
Merged-chr6-90435394-1	2.33543215746208	0	1.4422885336153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143614889-3	4.12085567257674	0	1.38898718100326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28887182-1	1.7641735567708	0	2.15062953780767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73933819-2	2.42126732683625	0	1.41311954906329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141645767-1	6.50836181138493	0.877066524571734	0.820686345779426	1.06869881420869	0.285205406034356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9293679972682	4.33211914461649
Merged-chr8-10602638-1	2.36487093946402	0	1.52321095620933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58740597-1	1.33925274303414	0	1.73861668452527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119991477-3	6.89744478701358	0.0953597874301196	0.963401064449612	0.0989824393484538	0.921152212995246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.76197067039868
Merged-chr10-44495601-1	2.78111880956631	0	1.4480937911036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17023287-1	5.78403775770157	-0.17366909711565	0.900564039438719	-0.192844805599711	0.847080512248088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50519934364198	2.9542060696782
Merged-chr2-170176540-1	2.95617202101099	0	1.44794716168546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75623124-1	2.05326097412898	-1.30326739952216	1.2115583440998	-1.0756951209729	0.282063630212151	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	0.878778741524029
Merged-chr11-32568208-1	3.59595019247153	-0.773327298508876	0.898608001882952	-0.860583588047779	0.38946742820586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60045726294831	1.81350735141944
Merged-chr6-129545303-1	2.56564714834802	-0.973413905721008	1.14121672318316	-0.852961480450351	0.393680665623185	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67667850730958	0.662147012823607
Merged-chr17-69349445-1	6.02718033304877	-0.0309986141596688	0.68472545016212	-0.0452715963052481	0.963890827082801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49772695277398	2.82855903330072
Merged-chr5-41337171-2	5.50196243193012	1.67763216587279	0.909149384232674	1.84527668936246	0.0649972996254	0.700473475483172	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	3.14938194232211
Merged-chr13-51739864-1	1.57991473113695	0	1.53428119757994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53444067-2	4.20578614589745	0	1.42011495194272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75203793-1	1.75769461178166	0	1.52835058683459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100728790-1	2.99009920986025	0	1.43566797802124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56324747-1	3.14611493567593	0	1.37350941789994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63006234-2	3.1989646351727	0	1.38455037403538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87246626-2	6.96346690057065	0.46498802381521	0.687513825646404	0.676332615388535	0.498829489512469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27141366690161	3.67077117427314
Merged-chr2-146834952-1	4.52076348386126	1.42871724982663	1.03305019009877	1.38300855420204	0.166662242991782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.43926704001285
Merged-chr14-47358165-6	25.2189371646349	-1.5278185021878	0.464017295986449	-3.29258955517991	0.000992692772469269	0.0357126316470265	C57BL6J_F1_Control-BALBCJ_F1_Control	5.72241214834908	4.20424570349038
Merged-chr5-99364331-1	3.32972032917059	0	1.41214358504002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95805852-1	3.26994086088812	0	1.39512067181542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104460204-4	5.64134110378909	0	1.35842656196655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122454191-4	5.76111981540691	0	1.39749735325569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107754849-3	4.21560774449567	0	1.39643627307219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99191177-4	5.00215755739396	0	1.39849093216764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17004362-2	4.20038883088195	0	1.38450970605961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112552205-3	4.90365447530477	0	1.36505936188479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118797477-3	5.48235776396266	0	1.39414028039813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134172088-2	3.92670126846637	0	1.37798574050374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90538130-2	3.96067189038735	0	1.38348390053889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7941754-2	6.70717755897782	0	1.36689849802429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27621011-3	4.94761136067768	0	1.38168510793859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129342253-3	9.94081768259637	-0.502145490272779	0.525313512876287	-0.955896770146547	0.33912439094958	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81857334141334	3.45007677026704
Merged-chr11-58643492-1	6.98504866153371	-0.573229658723343	0.691032772596748	-0.829526010133027	0.406806825007817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55980173949489	2.11340057764596
Merged-chr5-44238411-1	4.97853883702947	-0.300324825112602	0.958080251870664	-0.313465207665239	0.753927249906061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09295338928517	2.11005512232597
Merged-chr16-57130947-4	5.13876974150054	0	1.39871906068495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128180236-1	3.53724767877627	0	1.37528342809355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22695290-2	6.09477576630907	0	1.37777078182167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26699875-2	10.2078342571016	1.14340260801939	0.66177599714452	1.72777890548014	0.0840278706913408	0.817667284292425	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72336792166748	4.10979671391321
Merged-chr2-51284875-2	4.24313042344574	0	1.38214043614803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132343820-2	3.59063794027545	0	1.40493803025015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93294683-2	4.72851475295331	0	1.37881442828972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31178396-3	3.62521905875948	0	1.40774393696423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77832011-1	3.26028076483648	0.409544507568327	1.12681537126193	0.363453071384422	0.716266463026099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	1.44059547810395
Merged-chr3-79910941-3	3.97977175828441	0	1.40210501606769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120364465-3	9.18642347863985	0	1.35475658445886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60764065-3	5.02678825573399	0.624248346959304	1.36853016994018	0.456145111500604	0.648285632458058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr9-62366851-3	3.69667437020836	0	1.40852961655342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122898629-4	8.40252750572692	0	1.35386237662471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74166912-1	3.13353437185539	0	1.37903517858566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-58212453-2	3.73823566174261	0	1.39383276375813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-93729078-5	12.3868921528692	0.672019549155044	0.632176752162547	1.06302477409396	0.287770716611602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72248972571407	4.20324913577681
Merged-chr6-55056236-4	10.3675464260289	1.13944889159118	0.530398390096182	2.14828874458792	0.0316908244760522	0.438422126553099	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95796517222081	4.15564829059107
Merged-chr15-51449890-6	16.5534789455347	0.7226687121235	0.500733206885172	1.44322106500363	0.148958207353142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86637744379062	4.5901222959744
Merged-chr8-90841531-10	28.148344216672	0.294369867893054	0.33517758774143	0.8782504518773	0.379807818152132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78957558155537	5.14613746426048
Merged-chr17-31558176-3	7.08238728526567	0	1.35867891909001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105937320-4	6.81001220200401	0	1.38304284373707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8648783-2	2.85343711128459	0	1.40872930078325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40431240-1	5.244614596006	0	1.40584864005609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28755697-2	3.04780743949473	0	1.41090335414984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35728790-2	3.47848149998	0	1.39458242808911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43039650-1	2.61630494559089	0	1.38470083017494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89795781-2	3.80107650571493	0	1.40124601435806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154910787-2	2.99144403492484	0	1.41583560053755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129339420-2	2.61414998327096	0	1.41745004749628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131980744-1	1.6239383229386	0	1.47199652265455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87540228-1	7.56646772748114	-0.196422161321664	0.789259638075311	-0.248868878941611	0.803462209037456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44252268086676	2.8062683988595
Merged-chr7-98489928-3	4.47965324727331	0	1.37253318498633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96475625-4	6.83115924004632	0	1.37806482805509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53933507-3	3.71516018522253	0	1.39379274086839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57680147-4	5.78705176721893	0	1.3584827782289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88655543-6	15.7751940319449	1.02949717815618	0.587828210623914	1.75135721550941	0.0798843978689637	0.793601019041953	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57883501591671	3.61761270003893
Merged-chr4-118992018-5	10.4162120710889	-0.0913466155991745	0.60791631381712	-0.150261826378054	0.880558049129379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69013312374748	3.52129025071887
Merged-chr11-16980763-3	3.22481690142248	0	1.41597947479171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119483396-3	6.59762026754453	1.80913569075044	1.23875487922574	1.46044687378443	0.144167298293931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.28067447403188
Merged-chr9-96612110-3	3.69055540936431	0	1.42651139719996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4055203-1	3.69298645008267	0	1.38628716089358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64970897-3	3.22531797198578	0	1.42256877176665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94861491-1	4.51551596361102	0.20588292617041	0.864911042562412	0.238039423754442	0.811850517128925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	1.83150711868652
Merged-chr11-18878234-3	5.94030016859288	-0.307590574697851	1.06772198813559	-0.288081146699014	0.773284623911162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	1.06702908365212
Merged-chr17-26647302-3	8.58288540348509	0	1.38325903198032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33929890-4	5.69209179644912	0	1.36371609056144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43388153-3	5.9236004780695	0	1.37390904508859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167786071-4	6.34897438932724	0	1.38625152290363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59534044-2	3.19359873908453	0	1.40417458800847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84293181-3	5.97430671058715	0	1.37054623266549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88721151-4	5.61786564398045	0	1.36259371603484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34187944-1	2.92199130788517	0	1.39328521754304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21728104-4	5.67548820299451	0	1.35831332644019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61799436-6	12.6412127018351	0.349487566950075	0.506633431275115	0.689823342432163	0.490305287582677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01405708810591	3.92048502215132
Merged-chr11-104545966-3	4.36644823281598	0	1.3977462231177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-45345201-4	5.62058963477039	0	1.36357191375467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148082510-2	5.05007082998909	0.58452184074309	0.872639273351572	0.669832150114101	0.502964796191572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	1.97135661134131
Merged-chr11-44416591-3	12.0604987319651	1.74460208364391	0.562652851911587	3.10067224882395	0.0019308187696936	0.0606887881963539	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66194126857047	4.96516514347597
Merged-chr2-164794498-4	5.12798558265984	0	1.37361312063227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124900046-2	4.0753750041265	0	1.38610491823828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-127780793-4	6.41929440070983	0	1.38362185573693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160356341-4	10.156156321157	-0.0752310714344311	0.671788310309515	-0.111986276450344	0.910834287925944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48799367707272	2.460499463987
Merged-chr1-35971618-4	6.71346526669848	0	1.40242490019064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98531730-1	2.51956649063903	0	1.41654300444924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21984948-1	3.74449005870658	0	1.38190717156846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17652341-1	1.63030739726075	0	2.43491399956975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28733478-1	2.84580539478882	1.60000183881053	1.44266939691663	1.10905647699339	0.267405818872133	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.20232890637792
Merged-chr7-126213022-1	2.66705035954801	0	1.44721572179123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49800456-1	2.65951712837025	0	1.40701358111293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157597391-3	3.75804713093404	0	1.37178191388465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-5333593-1	3.0901549591689	0	1.39247676000661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138327549-1	2.90561346235988	0	1.4072820578035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40797571-1	2.12576196431381	0	1.42799604475185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79695393-1	2.14413453207088	0	1.66042544656919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52961628-2	2.5091059541449	0	1.42675353706501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60900712-1	2.92248176616379	0	1.40964413120218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55519842-4	6.06177141492845	0	1.36697372451137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40789756-1	1.36329369983574	0	1.80858216134908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116331001-1	2.61010211475314	0	1.44554228520038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-6263454-1	0.994553405031433	0	2.37352951365635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84349098-1	2.12903495248933	0	1.48817214310513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74323063-3	4.1953499664078	0	1.39532808910433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29993528-1	3.7295280338396	-1.75677232377855	1.04017160818857	-1.68892547147861	0.0912337132824935	0.858171555688366	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61944793579884	1.54667940924561
Merged-chr11-117150609-3	4.49054270938222	0	1.37874939243524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128452088-1	2.83970705451605	-0.704536822089311	1.42535323262805	-0.494289279289944	0.621101895358151	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.41385117919798
Merged-chr4-139235093-1	2.43386321502465	0.381863878463898	1.13165190642411	0.337439345346525	0.735785728772484	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42539729206526	1.338064021838
Merged-chr6-122616112-1	2.97155359555244	0	1.4298057361885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98050856-1	2.13505806291712	0	1.4895549958555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16536637-1	2.13134803415742	0	1.42123868768695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100952356-1	2.00158388198968	0	1.41112194437648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99165121-2	3.35208711029141	0	1.42780204341592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91543121-2	5.55323294753694	-1.37753862924222	0.859155154322487	-1.60336421461444	0.108854266848518	0.960572215286905	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83412113653556	1.25298535761957
Merged-chr6-84096021-2	2.73740221173474	0	1.45879443891764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124505764-1	1.648509389396	0	1.57146685609141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5180344-1	5.72936358920348	0.152053107909343	0.662941713864015	0.229361201338633	0.818588189229633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14434077738954	3.28707596589821
Merged-chr12-117828559-2	8.28994350660921	0.12883029016394	0.702092135139254	0.183494848775635	0.854409760239507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78747426955971	3.03983683354146
Merged-chr2-118573491-3	9.81087266049503	-2.49389058970932	0.760755338278249	-3.27817691736942	0.00104479890419619	0.0371446851754094	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0134657775943	1.25298535761957
Merged-chr1-53777995-5	13.9038297660144	-0.404448086538855	0.695988752022644	-0.581112963914245	0.561164321923089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92837697909323	3.5910114731964
Merged-chr15-50697254-5	13.1947597320904	0.0333930049211394	0.518151015253136	0.0644464720479717	0.948614727565308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57992929312206	4.41745343399518
Merged-chr4-86885088-3	10.5462455549724	0.220012579082398	0.613541472608244	0.358594469819777	0.71989848446356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4707788411593	3.11621861252536
Merged-chr5-27995370-7	15.6538063721407	0.373107853544066	0.447536915478902	0.833691793100038	0.40445468398494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27581549285658	4.55431314505015
Merged-chr3-137992529-6	12.8817187932815	0.0789072202553925	0.58412036895971	0.135087260175368	0.892542882753632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44492596100568	3.35379782400096
Merged-chr15-100457556-2	8.1786233038291	-0.764424364242044	0.688407359301162	-1.11042445132785	0.266816166565052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56160744912966	1.59708520306594
Merged-chr14-50363790-3	4.44336038151544	0	1.37837441860496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107928034-4	10.5800634072419	-0.233943148102907	0.561845330173123	-0.416383541055368	0.677129370285581	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21017871366514	2.82713797191836
Merged-chr7-102258310-2	6.66504974011683	-0.283070226625243	0.759111408352833	-0.372896815290218	0.70922524238025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71491581301229	1.94584897175726
Merged-chr3-15245110-4	5.03818517303113	0	1.39703997051307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41274665-5	13.0300912025733	0.895918033741637	0.511043247681483	1.75311588169155	0.0795821179709693	0.791149296046803	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19164559402981	4.30975204994536
Merged-chr13-24447490-3	5.48978993627152	0	1.36638212291257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54195935-3	8.85740603212697	-2.09000497244996	0.614754581317331	-3.39973875098478	0.000674502649460548	0.0268610179648542	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2386195245634	1.87845446409297
Merged-chr6-97788742-2	4.92614108707919	0	1.36170575452456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34236233-2	2.95125179787394	0	1.4146072140162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-93674946-4	7.8983980404512	3.23378921969306	1.11113680305614	2.91034300258855	0.00361032299084312	0.0978221411069802	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.80179175376942
Merged-chr8-124837116-2	7.02317749772906	-1.2070128069355	0.628952050651443	-1.91908557367024	0.0549735048914113	0.629514378005524	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55385461856295	1.61055102041193
Merged-chr9-40229028-3	4.67500362985588	0	1.35974411679591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50837417-7	27.7139536052049	1.62200610509742	0.366188441587221	4.42943009906848	9.4482429902485e-06	0.000844731974846905	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21019714014026	5.86235746615462
Merged-chr7-80144058-4	10.3452630140223	-0.26863656156286	0.619504911641621	-0.43363104394282	0.664556387795448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5779073721314	2.48279872084109
Merged-chr1-162608453-1	3.76962868542235	0.733021519865516	1.01470243767071	0.722400471953332	0.470048296830383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	2.1600769923993
Merged-chr2-79265843-3	3.48521620459217	0	1.4139441577736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106441016-3	7.35968525292879	0.382679787469702	0.94439979240138	0.405209520955781	0.685323507115029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	1.52554022439958
Merged-chr4-137603936-3	9.83067808493189	0.482475026070943	0.633839367658807	0.7611944771639	0.446540916501736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52983240776257	4.15940472233223
Merged-chr13-39011943-1	3.65862896393469	0	1.40371025093109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31929057-3	4.81163713911764	0	1.38815913003096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86296881-1	3.49329759295536	0	1.45221573150632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41170180-6	11.3053346629916	-0.459178180026906	0.660895316943657	-0.694782015025311	0.48719192083257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4206808573228	2.32066643467004
Merged-chr4-140902662-6	17.9006653044157	-0.188521976122854	0.432235219175861	-0.436155981186141	0.662723562861035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46461706190247	4.57626879177777
Merged-chr12-40257414-4	5.17396856864487	0	1.37795286624617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45561430-3	4.3358033361977	0	1.35920744975036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130476885-4	7.31906430985445	-0.268770603859036	0.811759606537116	-0.331096302026636	0.740571744815044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30219722357347	1.67656321522231
Merged-chr8-69092973-8	25.0151553472921	0.797653417749222	0.489701549767261	1.62885622503813	0.103343458859813	0.930403600283911	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0373403746515	4.65192033264162
Merged-chr15-99835304-4	7.30401250661985	0	1.34913700081853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-69985932-3	6.73833571458972	-0.385352162813434	0.681656296937529	-0.565317396090526	0.571857898371314	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43491183200938	2.27319583493277
Merged-chr19-29383009-3	4.77584919790649	0	1.38355328643082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42337230-2	3.7464623590886	0	1.43352477635812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98741558-1	2.65460660864258	0	1.43289953519065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16047248-2	4.58139030593173	0	1.38971560477905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80621091-2	3.81257158594403	0	1.39280797313329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161974566-3	8.80710948375921	-0.303239840122115	0.66767548422558	-0.45417249440248	0.649704678562105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90083588439961	2.55491375810168
Merged-chr9-66831533-1	2.87774179262986	0	1.43314686526823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101566822-4	4.2113521728391	0	1.40800226752227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12012614-1	2.90360675167966	0	1.4194556571144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129437887-2	2.97398725995482	0	1.47177469576219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118053726-3	10.6140410316751	-0.189644673781568	0.558239486999115	-0.339719203313665	0.734067998794308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75669766425857	3.64173807200044
Merged-chr10-77282973-2	4.06271063483319	0	1.39704327498068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89360465-1	1.78532227494771	0	1.48290507244006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14068108-3	5.8506113173348	0	1.39001126622243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55949360-2	4.25199767090796	0	1.39357515835351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83639230-3	4.01450347492672	0	1.38026533327036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112593427-3	4.89267385247625	0	1.37890886390721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119249165-4	6.20799492248064	0.952548617342214	1.04573650877249	0.910887789946572	0.362354499734951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.56533893459231
Merged-chr7-73422646-3	4.44776559864504	0	1.37517755112697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174108273-2	8.01541369808109	-1.36214927910872	0.791157233859168	-1.72171753074206	0.085120700067774	0.823323155691126	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02299161507002	2.33499946694429
Merged-chr11-107510524-2	3.92777397918022	0	1.37579657604017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100754978-5	8.33206307249606	0.659391388823613	0.712741443737411	0.925148094891121	0.354888878531134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62559269623071	2.98277022351101
Merged-chr17-34159132-2	6.49469494847869	-1.25245260158924	0.886738249980087	-1.41242649859456	0.157824418651125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	1.13341594473881
Merged-chr4-120523306-2	4.07835228384664	0	1.44444810504671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96578777-2	4.23871152663091	0	1.37990192330199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29465968-2	3.34142127413245	0	1.40195427818537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111570800-1	2.67109177305686	0	1.39793795975141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93458232-3	12.7275008944907	-0.629065876682348	0.545576902160149	-1.1530287924427	0.248898566777284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17297567351573	2.94331986625471
Merged-chr6-22453304-3	4.79749629767423	0	1.38334800620623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93485751-1	5.55360331633342	0.308966153880266	0.73598553858722	0.419799218437566	0.67463213590037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23285743666231	3.00215713277005
Merged-chr9-44182481-3	3.75826162237803	0	1.39554678426976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56479667-4	14.2820791566755	-0.4188712698513	0.497041793415396	-0.842728469517722	0.399380321099691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3903598971393	3.94067046269934
Merged-chr7-30873253-4	4.55685159202948	0	1.37901225214351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75645764-3	7.55100684269592	-1.5290299516856	0.794335554683728	-1.92491692291729	0.0542397524124786	0.623871921580602	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32225367526298	1.21469436624079
Merged-chr6-86497508-5	12.2290867721913	0	1.3482292824541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78703931-2	6.26725030706602	-2.31370692402858	0.950002214466502	-2.43547529552645	0.0148722401121546	0.265355285960126	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44445968990951	0.67591700901439
Merged-chr9-96035573-1	2.84405528525121	0	1.39157833502704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135514292-2	4.94554111180089	0	1.42000523413161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4041951-5	14.8020785504419	-0.0369683527638969	0.476078096571919	-0.0776518664271551	0.938104983457496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67893835981521	3.56431025119832
Merged-chr2-167776282-3	6.44370130691274	0	1.36025223288992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75727792-3	4.7426225145178	0	1.36547811013228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68219157-2	3.61030482189762	0	1.38967249728109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105226450-4	5.81421535298403	0	1.37650829216387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80371377-3	4.10480292114148	0	1.39394611630115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181228592-4	5.7730473131498	0	1.37179592596536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21167546-5	12.229925814751	-0.395358322947736	0.440860906383329	-0.896786984791008	0.369832594269515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09046067534216	3.8030833714597
Merged-chr16-49946921-4	7.0787032682955	0	1.36891160468348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121843446-4	11.2349142070984	-0.0384253207175628	0.655843956046648	-0.0585891207249757	0.953279376201661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34322728268548	2.31370593486859
Merged-chr4-99170980-3	9.80255385624989	-0.980217450906373	0.850049696713377	-1.1531295813601	0.248857201523621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00075396150771	1.25298535761957
Merged-chr2-102754042-3	5.02939204658936	0	1.36045510283394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95328767-5	15.441803362825	-0.797933874721431	0.509485517735108	-1.56615614565181	0.117312066554581	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68560390007967	3.92929797046118
Merged-chr3-96082942-1	1.66813998325204	0	1.5587346698152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6391022-1	2.24422283461686	0	1.49979675312555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103488893-1	2.22611939487582	0	1.47354568097394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75342203-1	2.19765371053348	0	1.41949137982074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24630755-2	3.7654682831885	0	1.38857164365498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189867646-3	5.17033996697835	-2.4983925595293	1.29576454454008	-1.92812233523189	0.0538399114493201	0.620191512285143	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0
Merged-chr14-68048529-1	2.76602697507335	-1.81531283086418	1.42476885317021	-1.27411041224335	0.202624288836111	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67800608098903	0.724326877898254
Merged-chr19-53783770-1	6.2497060394443	-0.313667465513132	0.791157408334511	-0.39646657189679	0.691760863509491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70252588433993	2.45531426399749
Merged-chrX-48345464-1	2.45151332419364	0	1.47283538677277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149939467-1	3.06723546287789	0	1.44134416158748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116665129-1	2.75134540189663	0	1.4686778874364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118498650-1	1.55462232146093	0	1.85632328046723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42884384-1	1.6723784270502	0	1.52393217760581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45254623-3	5.87748827126583	0	1.36589510442118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119138649-1	2.10491806983892	0	1.63573623408306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95459577-1	3.40326674470574	0	1.47125765306542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32519542-1	2.67926029426918	0	1.42834126464689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102678698-3	5.0773129918754	0	1.35688072874649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60719975-1	1.80547607260125	0	1.49766013358715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4675157-1	1.66188796965811	0	1.57813278288335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184546467-1	1.62646970477772	0	1.9920009240403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19162191-2	2.22265786235345	0	1.65480553573904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13733836-1	2.23051313655829	0	1.46746092921729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19006288-2	4.98622298498999	0	1.3797421362022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82920301-1	1.11067842441751	0	2.08085824445304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58982326-1	2.1775896186787	0	1.42491395771534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128283025-1	2.07759671818632	0	1.42765438507892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80729523-2	3.75650551478518	0	1.38450693049648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71867688-2	5.3001229658447	0.494592945230988	0.765604884436293	0.646015921900957	0.518269044103801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56763655772049	2.34314163205726
Merged-chr3-115768922-1	1.68412653855241	0	1.46409488821213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58999893-2	2.74939388561767	0	1.4038249702605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111247944-1	3.04228908038459	0	1.41295206083943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186554268-1	1.7250315505878	0	1.53585863467867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22074717-1	3.3367126014854	2.21529527204149	1.03856776333693	2.13302911013117	0.0329223382880983	0.449816312512892	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7137797891573	2.98683276996673
Merged-chr5-100644091-5	9.21717365366541	3.23231116834124	1.07292129765199	3.01262653226748	0.00258997438663459	0.0757334145686228	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.4902254818916
Merged-chr1-161915096-2	6.05813423021444	-0.456013052184541	0.850896531306206	-0.535920685308844	0.592013367717763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67223515518489	2.02922356684558
Merged-chr17-65766104-7	16.7182785229397	1.04132026309552	0.468301651367498	2.2236100600003	0.0261746911242091	0.388009281380115	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28672907242738	4.2575410608045
Merged-chr12-32640892-7	17.1027255468802	-1.30952106235621	0.551647171631416	-2.37383807929894	0.0176042685985667	0.295471814255879	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2682027206571	2.7470025063104
Merged-chr13-119325800-4	6.36604868459611	0	1.39712876671037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105242672-3	6.73506417919471	0.726791479608422	0.763860154229753	0.951471909594879	0.341364871619638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	2.22082744010265
Merged-chr15-100681960-2	3.76553267234449	0	1.36721248789882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12148046-3	5.00240045613811	0	1.38174644997657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83862044-3	6.65039595023614	0	1.39536520679234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121629485-3	4.54007375683961	0	1.36098744668944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80581328-1	4.99106423347943	-0.0478613667889619	0.965084646631743	-0.0495929211556765	0.960446787791843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.7079953405313
Merged-chr4-135891699-4	5.06918790849006	0	1.41022174028923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127290477-2	6.14169707827972	0.552927469949523	0.952432683673621	0.580542309632667	0.561548963461496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63657599924846	1.90562432554962
Merged-chr2-118591162-1	4.67770068861595	0	1.42007582752432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8660303-7	14.6200132097315	0	1.34660861755968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9774947-3	4.49090864334035	0	1.41723757068876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68021228-2	5.07722727300673	-0.409312197093139	1.36219280095597	-0.300480370183933	0.763810767366994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.55634759613363
Merged-chr10-93951483-1	5.411585890674	-0.24058686454342	0.745826021356966	-0.322577729462553	0.747015062118376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13328750154096	2.50936104741208
Merged-chr8-57602053-1	2.7571943313225	0	1.52599784713566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106071438-1	3.00249427578743	0	1.38552381894116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77826372-1	5.33894795514847	-0.0354575498634505	1.03385504395006	-0.0342964423019861	0.972640761834096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29835464915396	1.28022059301586
Merged-chr4-106980731-3	10.2650845549422	1.23126268137456	0.586081735771483	2.10083782896562	0.0356552044714669	0.473767113142134	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3898653101621	4.15811292831948
Merged-chr14-17899895-3	2.66913161211988	0	1.45502484806967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31803623-5	9.90643612832766	0.473619614274824	0.818526333405735	0.578624773505064	0.5628423850483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	1.84290121578781
Merged-chr8-110971570-3	6.58120073233103	0.923445163686392	0.773329435164161	1.19411614468078	0.232432538721535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90927269178975	2.40008246705937
Merged-chr16-4909353-2	4.38084187087646	0	1.4162992986552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11588348-2	3.84669798643751	1.26907953769184	1.3465759799798	0.942449261356115	0.345962676589525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr5-142441455-2	4.56114527369528	0	1.37334418977496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36839589-2	5.85121973593049	0	1.3753573960736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38402296-4	6.32094938858029	0	1.38943047050372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59025935-6	12.6149755472743	0	1.34263569374669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89285423-3	4.68083535986471	0	1.37210634891317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45547217-2	5.11955553341894	0	1.38253624716826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96689578-2	8.23372068940488	1.1789268263373	0.673304132010976	1.75095736129847	0.0799532549278001	0.793822645592747	C57BL6J_F1_Control-BALBCJ_F1_Control	2.035112151504	3.45970840197883
Merged-chr2-129622104-3	5.66865363844578	-0.116813273901327	0.949773323423238	-0.122990687378227	0.902114472373299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	1.45451904642141
Merged-chr8-105362155-2	3.27182669318207	0	1.38735830147708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12228509-4	4.30894095739688	0	1.38247397738447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85993089-1	2.4144553200793	0	1.47454674288055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16863116-1	5.43800967307719	0	1.39036792189289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3368424-1	2.61196950876653	0	1.43942552851303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86215439-2	2.85542272565111	0	1.41076449699537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127637095-2	2.74689568320712	0	1.4526896785396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43390561-2	2.92059691920209	0	1.41346522431915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165917773-2	3.77989851305607	0	1.38454650778525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36482673-2	4.68565905861807	0	1.41107972703277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153089541-2	7.37462123594257	0.739396670487676	0.783773047327481	0.943381088452684	0.345486012795245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93480637458641	4.2118555209243
Merged-chr15-100631660-3	3.80291782482155	0	1.41518028554616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19301488-3	4.74317471517427	0	1.37748035047113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83198567-2	2.68748464443141	0	1.4398329022537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18608106-3	3.78519665798171	0	1.39370484826599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67998235-3	7.54141647921305	-0.088448352056556	0.696907889637627	-0.126915412168094	0.899007348139362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38225544844175	2.2881631765938
Merged-chr18-4790503-2	3.9362616405571	-0.69319247122069	1.05949085056804	-0.654269426535431	0.512938239551751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.723581231604105
Merged-chr3-37038038-2	6.70060958220648	0	1.35006085708547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59389416-4	5.08062762140336	0	1.36041309242871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8345056-4	13.5935056723345	-0.867369911470044	0.549404460952135	-1.57874566574663	0.11439440582197	0.987669235399691	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26050096747292	2.53492308009985
Merged-chr1-58773500-4	8.49623440424935	-0.73887789840735	0.946431055091093	-0.780699126928198	0.434979474244693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	1.02674429890598
Merged-chr17-84169547-2	2.77944978166443	0	1.42985187807477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169102040-1	5.21017194452013	1.25662078716972	1.11261200811325	1.12943306202553	0.258715192285123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.41478649953382
Merged-chr5-140615881-2	4.26379478985073	0	1.39410454276663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99342648-7	17.115449526491	-0.190865868427756	0.390488695905661	-0.488787179831366	0.624992375245279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.94243417521286	4.77120292892529
Merged-chr16-38536926-4	5.0259154131671	0	1.37318008110431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27418281-2	3.6444782183494	0	1.38974053076652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91092144-1	2.57300847347388	0	1.45193357503294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173229707-3	4.7843498992741	0	1.38518439437535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13684085-3	7.76832209144321	-1.29943789619442	1.15031813733302	-1.12963349357172	0.258630691678952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	0.465515277017237
Merged-chr2-10351289-3	3.27972058282948	0	1.39200495864926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37042893-3	11.2783443124279	-0.41594847183152	0.495123083748429	-0.840091051062493	0.400857337269512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18813624938837	3.63691211095845
Merged-chr6-134527764-3	10.0586728538014	-1.61234571534382	0.600383407937105	-2.68552677177369	0.00724155730611178	0.160272452825075	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38514391162204	2.84744327107784
Merged-chr13-98834486-2	4.67460487598719	0	1.39860553529449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-6343681-1	3.10942662224531	0	1.41135347043334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35205848-4	12.3460995948493	-0.0129290065916033	0.485475859775653	-0.0266316158285975	0.978753556412573	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30848900412972	4.50438664125328
Merged-chr16-25036536-2	4.34454097146255	0	1.4159184711977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76505147-1	3.63173544236588	-0.367026482809116	1.002052155148	-0.366274830031087	0.714160009304977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	1.07599819202159
Merged-chr10-118094037-3	9.44363682368322	1.24198342616916	0.727224309192557	1.7078409102525	0.0876658658125097	0.838541052208731	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65444350555997	3.61982830057547
Merged-chr13-49271995-4	7.08532616287546	0	1.35363680438584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-133032694-2	3.29079185367927	0	1.38773955587717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151610871-2	2.88269164480696	0	1.43255838612084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28319324-4	5.85051768556837	0	1.35771243110302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28932653-4	7.07046666514922	0	1.36656795625378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84202813-2	4.10014593960966	0	1.36562841950776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34041044-4	4.9427465276294	0	1.38505708828377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34847172-3	4.59660503939948	0	1.40000589081888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65389906-3	6.93757558144691	-1.49954033193516	1.2013414255944	-1.24822161293008	0.21194991114096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0.303163067301871
Merged-chr7-80179996-3	7.78521652457284	1.14453489670874	0.672180373424924	1.70271989775163	0.0886204993692455	0.843221026643238	C57BL6J_F1_Control-BALBCJ_F1_Control	2.575641413063	3.6233494914334
Merged-chr4-128768318-2	4.32495886500557	0	1.37266948901085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46475756-1	2.14014041732819	0	1.61975834473792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106351723-3	2.98782749431444	0	1.56057366167325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11353711-1	1.49147257305333	0	1.61680359591589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7203591-1	3.23790337985671	0	1.39937365357087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41051924-4	9.07465677790936	1.56972086161409	0.720821638958126	2.17768276751925	0.0294296627336769	0.418458549971212	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05088435677382	3.99771240453596
Merged-chr15-63648493-1	2.02707599722065	0	1.44229028444586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120357064-1	1.81008179703882	0	1.4878222816835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66908798-2	3.51274563196461	0	1.40361987899803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35466284-1	2.57902545296256	3.12183559583511	1.48623688167253	2.10049665321316	0.0356851747142635	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	2.17065236728312
Merged-chr2-57288576-1	1.8350014312693	0	1.68194691333955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126285482-1	2.37315999109296	0	1.41531846554086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95529613-1	2.41844718039684	0	1.42681781421622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82234797-1	2.05370190167446	0	1.46264523317211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102795082-1	2.34582778115767	0	1.44811809030127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112216148-4	4.53306173324556	0	1.3673814114169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56731696-3	4.47075534022981	0	1.39196558965183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76292875-1	2.27853173693084	0	1.44622433625824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59753742-1	2.53033956665153	0	1.47895868269503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53872418-1	2.46327794130783	0	1.60175605289346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152104577-2	3.59901981082607	0	1.37521793585745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68252096-2	2.76390008717919	0	1.39528102985215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36744555-1	5.06332963629357	-0.539414064262812	1.13268582234826	-0.476225669660552	0.633913613624955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0.577068348605183
Merged-chr9-85525037-4	9.86347987285976	3.16916582879877	1.06582036473357	2.97345212538793	0.00294470339677567	0.0838507762940433	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.65195929168926
Merged-chr14-34467678-2	1.87094043875209	0	1.63554063585738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133843368-2	4.85778766396979	-1.27030886144864	0.97561693233998	-1.30205700551122	0.192896899190333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	1.39293125551424
Merged-chr2-24869732-1	1.94348770880272	0	1.47330050201045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8022165-1	2.98480786024794	0	1.45574279992031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9535771-1	2.0393567176851	0	1.5539683027086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9347918-6	14.5670688732824	0.143548568389838	0.555760002304	0.258292370438197	0.796181274054413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36706866445826	3.30711650823606
Merged-chr9-118638850-4	9.92072701006986	0	1.36600638027199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32153575-4	13.9612169263516	0.444141976632363	0.425713187997313	1.04328921244311	0.296814365766054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20704779662385	4.75408340830441
Merged-chr14-51902979-4	13.6257798662503	0.151062129127427	0.528000891899354	0.286102034002287	0.774799973733706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47567228287744	3.91697439334007
Merged-chr10-111118546-4	4.9570785422869	0	1.3697919830265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64200683-2	4.80390473435716	0	1.36961939284486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19570953-4	9.82834646252127	0.451383634023671	0.59316584361835	0.760973746010393	0.446672748661299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41305793892793	2.71840066232535
Merged-chr16-49999862-4	8.43525994652093	0	1.36295682716452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56423107-3	6.4963207371908	0	1.36804984264691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76853773-4	5.41026476669427	0	1.36184461797601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95563438-2	4.31591764900936	0	1.42739627403066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125560708-2	4.6267972245049	-3.2423595733054	1.21776565918993	-2.66254804348994	0.00775514979968986	0.168490083118042	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03280651306513	0
Merged-chr11-80043086-3	4.26736703834469	0	1.39567051947364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123942214-4	6.03633412273641	0	1.3821435488277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59800432-3	4.31633602569588	-0.813329435378976	1.01589204891596	-0.800606163073	0.423359681684786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	1.09982365757507
Merged-chr17-44432969-3	5.96179485051033	0	1.3648250652181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60894333-3	4.69125520007411	1.07392654886295	1.26976348348875	0.845768966289905	0.397681641060662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr8-82416781-3	6.95546578837426	0.788301553676071	0.944201823154786	0.834886709964383	0.403781498268946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	1.25243428981845
Merged-chr18-66073203-2	5.05215185928049	-0.0387589821579982	1.01754125819361	-0.0380908212280308	0.969615269599679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	1.28067447403188
Merged-chr4-154189125-2	4.29036433271223	0	1.36419098301491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145802193-1	3.92921267468906	0	1.46311269590333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25034774-3	6.46796436764053	1.24782182903023	0.907580529923404	1.37488827480195	0.169166084915399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	2.07776144459665
Merged-chr8-70866984-2	10.7460971385283	-1.13193410936209	0.716095725088582	-1.58070222975017	0.113946138316446	0.986049875868945	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89980968676942	3.68720667991291
Merged-chr2-102808419-1	4.70651572036253	-0.3142408922611	0.93524254594717	-0.335999355058053	0.736871352819075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78011430379706	2.71669785566213
Merged-chr19-32788588-3	5.85159626972316	-1.4959857656383	0.823187770805858	-1.81730805375523	0.0691699574720627	0.726852835535252	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01442870895611	1.56533893459231
Merged-chr12-55316610-1	2.83720064423399	-0.578833441825948	1.44614615311294	-0.400259296461817	0.688965544396609	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.724326877898254
Merged-chr1-128548871-3	8.47198814894321	1.9669184772764	0.727619337184593	2.70322458015901	0.00686703315655217	0.154170789102636	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	3.84032786772631
Merged-chr13-92331021-2	4.09262669072822	0	1.44539664391976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142361263-4	7.41279420501375	0	1.36367316771753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-127440094-4	11.2241190909933	1.9926077241933	0.889788631848858	2.23941692765049	0.0251288009670223	0.375887862346276	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17595087342351	3.0011441996539
Merged-chr18-89089177-4	4.69875748949353	0	1.38026843743076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32897661-3	5.39784526311059	0	1.35699130688344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26463962-2	13.398776035669	-0.451558374186938	0.685022201523544	-0.659187940453078	0.509775089990386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24185917622242	3.4477202165047
Merged-chr1-52800910-1	6.41437271586524	1.05793913395015	0.787763192177084	1.34296593755085	0.179283003666737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11265914598461	3.64091901912485
Merged-chr10-25433122-2	1.82838072625981	0	2.17051788275665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89828015-2	4.91289337980297	-0.0410202770436262	0.981368527509222	-0.0417990549867524	0.96665888836748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03280651306513	2.00425570563599
Merged-chr15-59600178-3	5.71670738224516	-1.66727536400239	0.913997786666467	-1.82415689438732	0.0681283562267019	0.720784218786938	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03635178011663	1.14143228603163
Merged-chr2-170347531-2	3.85068318860615	0	1.39701186855317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5099726-1	3.10220989900149	0	1.4520901697204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146465094-2	4.02470436398124	0.331131297386557	0.991226353791258	0.334062241303453	0.738332591957341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65880184244346	1.93957782847288
Merged-chr13-45104878-1	7.38959642132496	-0.233610389684642	0.671573867569544	-0.34785509229251	0.727949012609118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64333950319154	2.9462120107287
Merged-chr12-79002633-2	2.77049366042694	0	1.42063604248658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115034174-1	4.31224732203533	-0.198590859402906	0.873487784632712	-0.227353905683307	0.820148559698544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6342703608096	1.75132748634479
Merged-chr5-72552836-1	3.69577635357455	0	1.36686023514908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117189428-2	3.05817659079099	0	1.41846300404993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128633905-4	8.32209719774122	3.90448500314472	1.06115718468289	3.67945961211347	0.000233728700148564	0.0118218253237006	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.92222074906261
Merged-chr17-88476586-1	7.41203670567241	-3.80473144994506	1.19586938939052	-3.18156103308588	0.00146483654686165	0.0484939402258539	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4077129639533	0
Merged-chr4-53198492-4	8.41813646231584	1.25603428386336	1.30872198742063	0.959741103103872	0.33718553100367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.790093605168944
Merged-chr7-30348052-5	13.0273381641526	0.231746606419572	0.517043128976413	0.448215232795685	0.65399787021752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49521074430392	3.46547318743099
Merged-chr5-3247504-3	5.10720180036606	0	1.37979597476774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104986866-7	17.8998595726572	0.479693554172092	0.419763958786145	1.14276974983571	0.253134201508292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63362772566483	4.89431776125483
Merged-chr12-11276726-7	19.8058403673673	-0.203847921234078	0.437123159640907	-0.466339787170136	0.640972303773977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35883337096404	4.26535679339076
Merged-chr10-108300989-2	3.92530544478646	0	1.39565872577483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153835844-2	3.03506905632189	0	1.40704592422898	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116869444-3	4.22939065581148	0	1.38747934378828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68112762-4	11.7527837508813	0.34148462441547	0.564722762558817	0.604694280195415	0.545382149340166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1133364412881	4.28279607396495
Merged-chr15-96735918-4	6.45749633620434	0	1.36457111458782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25292304-1	1.88433468025193	0.614391629422989	1.46858943095297	0.418354930570561	0.675687633329908	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr11-8886850-3	4.84521241044181	-0.0370500693690436	1.20186093756604	-0.0308272514822522	0.975407307204319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	0.977756232605852
Merged-chr8-71660961-7	18.268112522111	-0.103976239096364	0.389948397434991	-0.266641021684666	0.789745567984308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7757602325158	4.70083772290607
Merged-chr7-101368442-4	10.1463230945006	0.327308275035872	0.586744107011927	0.557838197477147	0.57695487675173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17916347760512	3.60340341701789
Merged-chr2-160375041-3	5.44862025393167	0	1.36603830082805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17914765-4	3.98830287008194	0	1.41818438403127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-151966756-4	5.17776064810982	-0.0349733725411611	1.31728422914185	-0.0265496024073292	0.978818970525208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.601513806634888
Merged-chr17-21516443-2	7.3856945977626	0	1.35641094598275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102137792-2	3.88020715406786	0	1.371348585997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25811600-3	4.80150329421682	0	1.39854430697655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3456491-3	3.35021346441523	0	1.40602569296466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157416684-4	10.9220769740229	1.73147082314685	0.649645915947782	2.66525314889537	0.00769303877711643	0.167542425835445	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29675716151532	3.43022022300844
Merged-chr5-43881249-4	11.3166642816509	-0.0787993852935859	0.489820084469135	-0.160874140918473	0.872192529554076	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2758826209352	4.22447147251263
Merged-chr6-22409057-3	5.80553412297286	0	1.37968794364345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101840015-4	6.43311198813426	0	1.41491663748375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80830111-4	14.2941095608685	-0.130810595489026	0.442385898001022	-0.295693411747778	0.767464228989351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.20490958684529	5.08890147274599
Merged-chr15-81905218-4	11.1171785324015	-0.121552630659334	0.482205741434074	-0.252076282413889	0.800982102020006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18597083288347	4.10110544792406
Merged-chr5-76179403-3	5.15055205155688	0	1.35812297967298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72461884-3	6.26341789216273	0	1.38596465445185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39436311-4	5.48054728325562	0	1.3976032809907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102719801-3	4.07513599075676	0	1.39072552656419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114794755-5	13.5737707518817	-0.334114837177224	0.439458592241651	-0.76028741518723	0.447082802702985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.83600760974956	4.59923811044514
Merged-chr11-110431666-3	5.20373641679095	0	1.37056721454534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-40763856-3	4.27503306605028	0	1.37156541780859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-86678539-3	10.6715929535609	-0.983189687811463	0.547785520035679	-1.79484424441782	0.0726785192949547	0.74966444598756	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91648155866682	3.95385490884319
Merged-chr18-65512707-8	19.338794881558	-0.404681506528473	0.522490992565555	-0.774523412435094	0.438621328486269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4035485405775	2.76371368401874
Merged-chr2-155534330-4	9.46207017691482	-4.10844898607865	0.981298509071575	-4.18674740468701	2.82980450851454e-05	0.00205924154321743	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22859393752096	0.465515277017237
Merged-chr11-116633144-3	8.3268989790091	-2.42550703128131	0.642687619960256	-3.77400615159087	0.000160646796409956	0.00867189593450723	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66767127120057	2.01786586685489
Merged-chr9-84485163-1	1.85780494466522	0	1.46869240464735	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4195407-3	6.52628216516398	0	1.35621181403774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124512259-1	5.01726859112312	1.01260946474925	0.920157586740007	1.10047396157086	0.2711256686031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83514313210961	3.7143077813003
Merged-chr4-31937782-1	5.01935323905028	-0.697213443518501	0.744726554681147	-0.936200594884134	0.349169916967714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17216837611484	2.38418592814324
Merged-chr3-84918059-1	2.5960563901291	0.543502874815955	1.40796399292234	0.386020436281097	0.699481533675435	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.724326877898254
Merged-chr7-118160331-1	1.80388657233737	0	1.60597256218927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66949672-1	2.70431912580042	0	1.59621761425172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59336735-1	2.29527009714035	0	1.45374994268006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-87027764-1	1.39218145912783	0	1.49427121986324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141025630-3	5.36884082089845	0	1.42317099555053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93272052-1	2.63064590622863	0.616921488442553	1.44390189924254	0.427259974355726	0.669189982527309	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr4-109431112-1	2.72729867341125	0	1.44726915878932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-43453213-1	1.70214458392174	0	1.52617575405242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-40329817-3	11.4796860268111	2.75591106731452	0.786678646138687	3.50322343289927	0.00045966371719028	0.0201995634622041	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73830414206781	4.27050974084933
Merged-chr1-138921471-1	1.7599734716727	0	1.56165350778509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148837190-1	4.11832069963506	0.740468253829302	1.07455203427428	0.689094832275287	0.490763591842772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.988408630094828
Merged-chr13-49300847-1	4.52156719716128	0	1.36484284281805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88986785-1	6.66134976816318	0.56479094573713	0.668432356249354	0.844948543344361	0.398139569498074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73855547031609	3.0969847890082
Merged-chrX-12260525-1	3.20874588808056	0	1.43235770105824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-20452614-1	1.06462736540811	0	1.67291265898233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149892471-1	2.31843586447425	0	1.4085363788954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128305101-4	3.88162848227094	0	1.43788805891431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113644386-2	4.40733461927832	0	1.39297621231041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146113272-1	1.9847816675231	0	1.47112540424928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158606635-1	2.38268651005176	0	1.425853405911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19853927-2	3.65793283262908	-0.0339035246633763	1.20496514895218	-0.0281365188801173	0.977553267740385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	0.879366456215217
Merged-chr4-123991129-1	7.89359474391655	-0.74266737880785	0.848340672480103	-0.875435309068325	0.381337094799706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	0.730937814817307
Merged-chr14-45772812-1	6.56817153993941	0.757922654191409	0.720689875696142	1.05166269119474	0.292954333987886	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7705374360976	3.30996897045029
Merged-chr5-115125352-2	3.6780917695906	0	1.38389663092763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80686216-1	1.88001915019223	0	1.6707434042933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10457897-1	5.34807128734748	0.111821929250456	0.878841295870621	0.127237909479071	0.89875210177784	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72360508656996	3.75373328679979
Merged-chr2-103547354-1	2.57624472746473	0	1.41656288559294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168629024-1	2.4219695376035	-1.86047679643092	1.34134237936616	-1.38702603082598	0.165433825419289	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr7-101540017-1	1.9185935855098	0	1.42040433133363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70926665-1	3.19537783115227	1.82314013706971	1.27486256211052	1.43006798634947	0.152697507320934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.40298672487694
Merged-chr11-85574670-3	4.59706008316421	0	1.38716182540141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19764813-1	1.74129244220828	0	1.50695640341409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121450793-2	3.40280752753024	0	1.46318587202307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33897910-3	9.18030158254959	0.318684982014575	0.517318600267763	0.616032328722811	0.537873183133335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55524673985241	3.89011906261907
Merged-chr18-34080207-3	4.96631972417761	0	1.36655661607931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98086211-3	8.86322766376482	0.245087655720455	0.570688743036863	0.42945941848484	0.667588920577247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40619412439842	3.60145109619384
Merged-chr2-45100178-4	6.96026178058547	0	1.3557057321826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125684801-2	3.7883142780177	0	1.38295157104584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54180006-2	5.23837880502873	0	1.37183367732931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119335086-2	2.98910629894176	0	1.45624920092586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51652939-4	5.74903160284487	0	1.35302849009879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75904438-3	11.576755761628	2.79940809024322	0.503213730572499	5.56305982958448	2.65084954590142e-08	5.45431965864079e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92526156064402	5.59111434342539
Merged-chr9-107645750-6	16.5303960732419	-0.798265294714205	0.374002910546076	-2.13438257351706	0.0328114768998924	0.449156150289914	C57BL6J_F1_Control-BALBCJ_F1_Control	4.98909771270981	3.80688915595953
Merged-chr5-52461860-5	17.8047745650293	-0.542284840591298	0.456934322548648	-1.1867894658615	0.235310674998564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72947058659898	4.08475857657839
Merged-chr9-123989857-2	3.41471444453007	0	1.41144387216923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8913255-2	3.61690851443243	0	1.40831744983753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32493835-2	3.88760294172673	0	1.38415868037393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73459924-2	3.54432208117999	0	1.41550515425935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44561219-2	3.46082833215907	0	1.39070706932214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108918704-3	6.38516436491947	0.457359026556426	1.28760108029998	0.35520242531163	0.722437947910664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.67591700901439
Merged-chr5-143594455-6	14.1744804691227	-1.3060638222764	0.607435072396859	-2.15012909465837	0.0315450048009678	0.437549098233173	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22359957279206	2.25412887041918
Merged-chr13-96435897-4	5.05493513350327	0	1.37903278046653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117936465-5	12.1434925992802	-1.76780309069552	0.668422740570108	-2.64473810269791	0.00817541660826731	0.175447087014924	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95745130067196	2.09154641726792
Merged-chrX-13482757-3	5.82292588622365	0	1.37471846356134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-139381867-1	3.41577193378417	0	1.37034409066166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65466304-4	5.65748534156597	0	1.37464456499357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133344316-2	3.76602967629509	0.45797746622621	1.02818855756918	0.445421671788442	0.656015053555336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.66624882212637
Merged-chr14-21101907-1	4.22154369474499	0.743286396160768	1.03209637783412	0.720171499604111	0.471419409339441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32121820265614	1.88824264663368
Merged-chr1-55821302-2	8.60110219455032	-1.67234726996998	0.78907033788661	-2.11938934930576	0.0340575761652496	0.45984495349399	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27597054552072	1.39284430389808
Merged-chr7-35595028-3	8.25483939177072	-0.996293285601037	0.703274917132185	-1.41664839926856	0.156585750517191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44403150744747	3.35589259616542
Merged-chr3-27275414-4	5.75444635837568	0	1.36997303121691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135175215-4	10.9219428604352	-2.60438418438672	0.887835017780489	-2.9334100730758	0.00335260759691916	0.0928953824924017	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22395518997583	0.577068348605183
Merged-chr10-8072804-6	13.6156764691538	0.0149529303042116	0.448310365584476	0.0333539695980863	0.973392316159318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07186604202289	4.20998978844357
Merged-chr4-124738244-2	2.27971815421856	0	1.51341797921363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28419858-1	3.40485505979186	0	1.40201475075151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128773409-2	3.04790354416788	0	1.39084416862032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128734441-1	7.00261653032985	-1.40957933264596	0.760988749970549	-1.85229983058293	0.0639827800385804	0.694081009801874	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36793544212227	1.25156707489019
Merged-chr1-33503733-1	2.58339252010168	0	1.41565660285431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34650542-1	6.45774019410999	1.15456401713009	0.791776582938153	1.45819419519291	0.144787023365825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89961628724531	3.14379406257966
Merged-chrX-140509868-2	2.03411508310539	0	1.58982060600052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92127384-1	2.44649438220208	0	1.40356096837638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109005994-3	6.25000328361011	-1.25068602300436	1.08121903842813	-1.15673695944404	0.247379844620728	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7821740460218	0.724326877898254
Merged-chr19-37146349-2	4.2147264331512	0	1.37514698732315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4568122-2	2.72513213742863	0	1.41247725738363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46705344-2	3.13419352311243	0	1.4262681723306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6106361-1	5.11669584357466	-0.100833931825514	0.940871208899156	-0.107170812404274	0.914653470369728	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65199033198162	1.55469575053842
Merged-chr9-21134823-3	4.04742611348058	0	1.37613039410829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4573898-2	3.5414846037885	0	1.4152516186389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-151771278-2	2.19191472488912	-0.683130785670933	1.48359304871277	-0.460456987354886	0.645188238336984	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr2-91089618-2	3.69041418580799	0	1.38684801114197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44239562-2	5.8686226744746	0.712727554457874	0.933253022716835	0.763702379857308	0.445044622241688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	2.47829491766041
Merged-chr4-119962237-2	9.70450733176959	-1.39704864572751	0.563751656491328	-2.47812778843515	0.0132073833001502	0.244530023437625	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0238625127305	2.64653742768528
Merged-chr16-32060036-4	6.1461197099276	0	1.37230085603321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12806439-6	11.8714183365561	-0.99521494679823	0.517238211481236	-1.9240940145319	0.0543428002116987	0.62476051129814	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94739292284606	3.02706921908401
Merged-chr5-139705287-6	23.0918037988803	-0.108654396237812	0.481504499480887	-0.225656035104455	0.821468954980533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86741929821921	4.73484933261312
Merged-chr16-57309978-4	9.74519839585776	3.55401059471965	0.88389486920983	4.02085216072903	5.79879903630223e-05	0.00374240688471431	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	4.1273596652295
Merged-chr1-172411013-5	15.4478616863214	-0.0655359234686692	0.500889905933193	-0.130838978171403	0.895902687899441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1123913312204	4.15843801089098
Merged-chr18-54963321-3	6.98580889678179	0	1.36602765583676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83147445-1	4.6316746295954	-0.891093462583625	0.746959548890344	-1.19296080210421	0.232884724816352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68980361513465	1.67575558916111
Merged-chr3-79060867-3	10.5160640933186	-1.37707830976407	1.0308698754289	-1.33584106256974	0.18160122827646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0.577068348605183
Merged-chr13-97208289-4	5.75546163122843	0	1.37591766152329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5250088-4	6.15165566144015	0	1.41255412631128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16191374-2	3.86533651866485	0	1.40086737379517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105347994-3	3.83274947862206	0	1.37558993385333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27629663-4	4.57142226359185	0	1.39050354355056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76702271-4	9.27823708582303	1.19974862871698	0.754370872839206	1.5903962784267	0.111745508684945	0.974081800289436	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9163454460826	3.55975232807953
Merged-chr9-101182196-3	8.33993516520434	1.16042580039182	0.651910451601415	1.78003865031039	0.0750696355767333	0.76446427881522	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21565186750098	3.37146171005886
Merged-chr3-60531489-4	9.87019233984387	-0.485498637851339	0.692605154382731	-0.700974624256195	0.483318851605501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39685684651355	2.74897170958137
Merged-chr17-71271776-1	5.26647923192649	-0.786375783178458	0.84548484716422	-0.930088559027384	0.35232523395987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83098930992088	2.73194986207069
Merged-chr19-53547747-2	2.83589558048287	0	1.43731450170494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94647344-4	4.71024035876641	0	1.42936530804443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170170387-2	3.85960982911329	0	1.37311148468226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140641026-3	6.27957433858843	0	1.36240175868657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106640981-4	8.81865277753022	1.22371271716576	0.7311245655491	1.6737403923047	0.0941816316932257	0.876797279878756	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22674752688732	3.37192306206668
Merged-chr8-127815423-3	6.37400463219715	1.19966306048517	1.14388584178819	1.04876117586156	0.294288050292951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.22903941979969
Merged-chr2-35449880-3	4.77161700217342	0	1.3996146458599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53147859-2	6.21440350659985	1.12875244620753	0.824035155578383	1.36978676039043	0.170753476114118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57964324217899	1.85391959962679
Merged-chr8-40852079-6	25.55358040838	2.14918014422026	0.544833419506681	3.94465549886098	7.99147828485551e-05	0.00487005345388409	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31747866375397	4.83654735347461
Merged-chr11-22759927-3	3.8618294620553	0	1.38018801483046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-139882250-5	14.4045219399404	1.07905032324509	0.554901609694269	1.9445795513904	0.0518256023865595	0.604625371000121	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6366167772367	4.10746690318613
Merged-chr4-136260596-1	1.38161243626624	0	1.61157707496955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20888172-1	2.38599237863926	0	1.45363132128951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34602911-1	1.63154768421826	0	1.63674320435437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19092152-1	1.79687373680877	0	1.48144128850102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98780309-3	4.56711349428965	0	1.38830486527567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160144180-1	1.32880240082356	0	1.51839561147022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106414370-1	2.57103305408116	0	1.45254344797465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8978772-1	3.22737872125229	1.00754408126928	0.948575202689955	1.06216573911283	0.288160450417028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	2.29190231850885
Merged-chr9-68884620-1	1.88377658319937	0	1.51715762334454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100421298-1	2.02437101138136	0	1.44400922848376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73215778-1	1.15253697912705	0	1.60889760118604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88343518-1	1.96824116965466	0	1.480908484232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92862688-1	2.07660310777945	0	1.55801652979268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89668226-3	6.93962012821062	0.116795978995386	0.726706729757459	0.160719550559779	0.872314290492943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37981902381829	3.08967599766613
Merged-chr13-12475552-3	5.18993075800018	0	1.35475739235203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90896322-1	1.99720854868084	0	1.5178031141354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48855650-3	5.73983959154939	0	1.36033684124621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64060215-1	2.03158381421148	0	1.54258416690884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57925073-2	2.97598283085628	0	1.40942677088636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75472815-2	2.94042392597292	0	1.41913561927831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40978093-2	4.30600190031549	0	1.39144983167944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16343582-1	2.30125623529007	0	1.45804768758292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22345946-1	1.73988787401044	0	1.47278114337713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58073439-2	3.65285264095816	0	1.37411617901811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117248536-1	2.59831292015857	0	1.40504916431506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34037912-1	1.92667932433265	0	1.53870428797496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-66944556-1	2.68227070907267	0	1.44290570677173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99130258-1	2.22859794178317	0	1.47028422187569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76473966-1	5.12691162902306	-1.88243841741861	0.935966322206703	-2.01122452032294	0.0443017469137577	0.54385696939588	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73256591961119	0.837303648891292
Merged-chr11-19968016-3	5.44069184496204	0	1.41173782711297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35959224-1	4.14235380762258	0	1.39174190011202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67562909-1	1.98152982860333	-1.92562167086231	1.45468117122795	-1.32374138673757	0.185588948301161	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr7-98374762-2	6.24917028292076	-2.41098455088046	0.811482291412617	-2.97108707903343	0.00296747627053089	0.0843225523208514	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70089187832907	1.32509503823899
Merged-chr10-39456510-1	2.41969868342971	0	1.43261028849668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95248258-1	1.63554873146506	0	1.50524180089192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122400397-3	5.93714475354354	0	1.3787362594935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9642110-2	2.92317373625022	0	1.40098193321293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4516300-2	4.74940143144379	0	1.39466544819378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106429253-2	7.39643764402471	-2.22866089551017	0.858548897013461	-2.59584620429048	0.00943582901657667	0.192972998311547	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40826520406583	0.788686275880602
Merged-chr18-80420088-7	24.8262997631661	0.235328502064416	0.334896727624565	0.702689762702697	0.482249108880712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.5023777617926	5.76565039020508
Merged-chr7-4836449-4	5.75284940148888	0	1.36365707362219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111035667-5	10.9580974814907	-2.38290171619748	0.557846059124468	-4.27161163410819	1.94065336162254e-05	0.00153331360587848	C57BL6J_F1_Control-BALBCJ_F1_Control	4.56516395675844	2.35740836713395
Merged-chr9-3258861-3	6.55760060783182	0	1.39407184667839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51796559-4	7.57582661841457	0	1.35937763573906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21037660-2	5.3039058561167	0.335100519927751	1.08649187448441	0.308424322166947	0.757759477028481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.02748994520012
Merged-chr7-17003387-2	4.93092616205026	0	1.36344276761255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86484536-3	3.961743885128	0	1.41728803071256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32280763-4	5.52126766258838	0	1.37316580193552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83682071-3	7.65693267860189	0.29220025579846	0.854059139479389	0.342131173699022	0.732252178275943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	1.51118621810175
Merged-chr11-6484576-3	10.417682699661	-0.0652729536938889	0.67101879231131	-0.097274404892682	0.922508481526331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39006831005986	2.72985264989316
Merged-chr12-17556980-6	15.6255177931628	-0.990780018151147	0.475545025956016	-2.08346205737159	0.0372091267488042	0.484842987745694	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10524292556991	4.18463169640725
Merged-chr15-90633989-4	12.9314468592355	-4.03839084125488	0.884058532489795	-4.56801296841903	4.92369575875641e-06	0.000492904563075948	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58742111384487	0.577068348605183
Merged-chr11-64517080-5	14.4095836964766	1.47070121894296	0.592051472970236	2.48407661510352	0.0129887859480975	0.241995150827261	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29157889616742	4.26793682037774
Merged-chr9-110985768-2	9.32034187801632	-1.05889366893405	0.692942875207183	-1.52811105622156	0.126484966849784	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94745843011017	1.92520958238212
Merged-chr9-56744557-3	5.2076112375938	0	1.3788429908731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86920961-2	4.21934475635345	0	1.39168337096871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72691551-2	4.13037182381791	0	1.37718490561318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31446110-2	3.86875344302181	0	1.41855015436216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34282255-2	3.33183178485824	0	1.49029150472586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83385681-4	5.817919623439	0	1.37968590535846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153431905-4	4.79693942271966	0	1.39344424514193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138993714-2	3.30616854650656	0	1.43250895658346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44448247-4	5.94810645187945	0	1.36865174441532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137857386-6	18.1790122089443	-0.904914937024952	0.435763100104872	-2.07662130365598	0.0378365250789016	0.490404307764429	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64185411837661	3.7594470919938
Merged-chr3-136347515-2	6.94202961770034	0.2942648400647	0.798836828863958	0.36836664188753	0.712599867316332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	1.96344525659293
Merged-chr1-172046532-5	17.8008234415735	-1.37843399947779	0.385536199148843	-3.5753685452131	0.000349734872985858	0.016417303938375	C57BL6J_F1_Control-BALBCJ_F1_Control	5.54831129441337	4.24267175508783
Merged-chr8-123145450-1	5.81501175191965	2.83150046141469	1.17385782379107	2.41213237585292	0.015859522191191	0.276280567099923	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.33245162145219
Merged-chr4-34733626-2	3.05561788691183	0	1.44166198601136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-89400883-1	3.54049316983095	0	1.39809955481689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9011802-1	4.60112399460856	0	1.38074011256782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14692347-4	5.0748730134316	0	1.35891336309934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57286946-1	4.11203852872167	0	1.40456527994082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61337323-4	8.71930828443337	0	1.38668847048089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6225476-4	7.92348653018061	0.40606287444196	0.691385365821123	0.587317716740648	0.55699034453184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	2.32066643467004
Merged-chr6-87998082-2	4.71776007435891	0	1.36230514226792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42795130-5	13.2190962771225	0.203110197628231	0.470270890693429	0.431900425154402	0.665813785763731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70526402169493	3.55849536037823
Merged-chr19-17263927-2	12.3177352492951	1.1248946750454	0.580604876317737	1.93745302688398	0.0526899900343046	0.611872499097365	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12940667710276	3.58247173392429
Merged-chr3-152905957-5	13.7425925987316	-0.160338195784441	0.554751874823844	-0.289026865993657	0.772560818416713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72997320180341	3.25660672223707
Merged-chr7-88259853-4	4.57111886189958	0	1.36269951578715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6391669-2	2.28198990303703	0	1.49000291787752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122348987-2	7.72882489358338	1.41926619255953	0.640155497550885	2.21706475690574	0.0266186666972617	0.392559216323983	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03056478861164	3.46376108164071
Merged-chr17-46453558-3	3.6850979454321	0	1.39079642839646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23689130-2	4.82447019745803	0.00159820104506778	0.876297518569591	0.00182381099021777	0.998544810175812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51012229023221	2.01093638226392
Merged-chr7-45389146-1	2.99708723220323	0	1.39740505209594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6665481-2	2.58938912937467	0	1.49207456497809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81767181-1	3.07063049642901	0	1.3939637324377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40392741-1	1.95514462575519	0	1.63402637229406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-31939323-1	2.2578700600743	0	1.4515670977674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42906590-2	6.24706538451249	1.100827642603	0.883948814341682	1.245352247486	0.213002298142235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	2.37618163600509
Merged-chr18-64956093-1	1.32530421196702	1.47963361934481	2.333240363495	0.634153961372604	0.52598034966099	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr19-32960844-2	4.21024111916827	0	1.37383147262667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44963297-2	3.18168547504977	0	1.40736657799888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82903178-2	2.61406082649717	0	1.46101329079698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41390299-1	2.65155648286965	0	1.38925438240216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7897740-3	4.40660584751838	0	1.37411403007256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-32866626-2	4.38810165855122	0	1.3917891636411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88866024-1	1.51270965565962	0	1.54073847961427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58754789-2	6.41992060036328	0.402423555408275	0.750027453546245	0.53654510045673	0.591581874744336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59408797040742	2.46141716136718
Merged-chr15-35140002-1	2.19316611431451	0	1.45327180067108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8667658-4	5.86005994714571	0	1.36417876622134	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131096624-3	7.9533254975059	-0.243518945332615	0.651747549597671	-0.373639986038982	0.708672180548747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59343415562495	2.8394639875232
Merged-chr1-121483328-1	3.99332041579346	-1.18739346230348	1.24430891265675	-0.954259388665989	0.339952359486909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.577068348605183
Merged-chr15-59665569-2	3.51002973734868	0	1.44462690279596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99576038-3	4.83481849294314	0	1.38383108252626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35814937-4	7.71321136985845	0.710405388421655	0.863837756552659	0.822382887333716	0.410859015688149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	1.4994506617149
Merged-chr13-94164491-2	3.12019713181935	0	1.40533647869357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61269352-1	5.38878482481237	-1.17916521842748	1.25829744986954	-0.937111665091377	0.348701121649902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10936615683937	0.376242425970964
Merged-chr7-66310129-4	4.36494225455554	0	1.41134980282798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126385131-2	6.88325107489723	-0.713413393398196	1.13722521600965	-0.62732815220318	0.530444153278715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	0.577068348605183
Merged-chr6-97819182-3	6.71512782271957	-0.0634310118254116	0.897931014174021	-0.0706412974094227	0.943683241913463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.01372795773128	1.34503387201423
Merged-chr13-45416846-1	2.71954890630647	0	1.42071730108053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-50962489-1	2.17684359900233	0	1.4399737189744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100852064-1	2.46311131773643	0	1.41673889430889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-68883207-3	5.37670552799847	0	1.37649628052328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121409197-5	8.31409855919824	-0.315928057616724	0.802952880529916	-0.393457779749447	0.693981401461167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26276386882201	1.6044622311735
Merged-chr12-85350001-1	2.47214765292123	0	1.48190694026923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86880374-4	10.5926343085119	-0.157441963211094	0.508589907741924	-0.309565645748098	0.756891284452128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68924713944147	3.55491097086014
Merged-chr15-59643955-4	4.88675603324613	0	1.39875646592132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40096002-2	2.7797482735294	0	1.51240770676532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111433192-3	5.56563875581623	0	1.38108896625996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120057950-3	7.79243406647401	1.62005871257226	0.856205854413744	1.89213692504069	0.0584727396421348	0.655905830418243	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.91828639772433
Merged-chr1-161767390-3	9.59935245697303	0.559084994652944	0.634062562025278	0.881750521379396	0.377911733728625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86554435289797	3.53457610908361
Merged-chr6-135250834-5	13.4814426301603	-0.781292299153076	0.57767589700725	-1.35247515639946	0.176223361041746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22092992147609	3.53501988627162
Merged-chr18-60816155-5	16.9454594596308	-0.461335151777733	0.467999764706234	-0.985759366924717	0.324251209410962	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16875842835647	4.69591633183584
Merged-chr2-79865467-4	5.70208619780488	0	1.4034420105806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121243100-3	3.78280697814617	0	1.38987141967516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171613490-3	11.4144634118495	0.391173214203699	0.4527890002599	0.863919428208651	0.387632153329404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2128812328455	4.08274931003638
Merged-chr2-6726320-3	3.79458243790138	0	1.39469227834565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76944471-2	5.67110130343024	-0.123790376464845	0.983943178771368	-0.125810493060605	0.899881935515304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.59173462754619
Merged-chr13-73970708-4	5.24803243209817	0	1.35477147444952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166457548-3	4.39908249573692	0	1.37152083373081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7873871-2	4.39835378750037	0	1.36708911997572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106373151-4	5.94372271699343	0.737649411667713	0.921708887029196	0.800306281135323	0.423533364792785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.9134233865196
Merged-chr9-98330363-3	4.00801470849346	0	1.37422458111052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34674432-6	14.515304987383	0.503265012180079	0.554700963885805	0.907272647688576	0.364262634758711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61960051891651	3.49002977320802
Merged-chr6-54946308-1	2.55282782461405	0	1.41081401938202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17579049-4	5.44448063671508	0	1.38152914499241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171463364-2	4.25676156261133	0.990878360251518	1.04230977392637	0.950656306827945	0.341778875193769	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	1.29646248785177
Merged-chr2-59339837-3	6.86227620416262	0	1.3909182188776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83072216-2	7.00880773129862	-1.08923018834213	0.864718620131647	-1.25963540391475	0.207800917695082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35476919581267	1.37212355142653
Merged-chr1-6976410-1	3.61204381342819	0	1.46862492590013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63407671-2	4.26963815741724	0	1.45568620622112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84979472-3	5.5147759926131	0	1.37344040010032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70570372-2	3.19453528942163	-0.687902727384027	1.442112905334	-0.477010312326901	0.633354778387301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr18-60815335-1	4.40133714661144	-0.33477373344143	0.927334022590314	-0.361006633301677	0.718094488339733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61691174577224	1.86575916392988
Merged-chr14-20829617-2	4.1068160335741	0	1.36742826965056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120800346-1	1.12703905327709	0	1.69609130160075	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14717945-1	2.50897696281873	0	1.39852413147777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4667373-1	2.92615131485976	0	1.39492391006943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108699232-1	2.19748243232297	0	1.54289281942929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-14898930-1	1.74556637803556	0	1.54208617886337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134171071-4	9.7900665570755	0.242225612923195	0.668790703154543	0.362184479809106	0.7172141767005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83995505205827	3.10690671054605
Merged-chr5-92466110-2	4.42691771656845	0	1.36490735487449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101545981-1	1.1027985177969	0	1.67293321785378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117370578-1	1.98693427959732	0	1.42326163330881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13503233-2	2.39712059336454	0	1.44278410823654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72820277-1	2.92059265073633	0	1.42711252873354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28723197-1	1.72938391178018	0	1.52346871539353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162040761-1	3.08010868110313	0	1.38398099589973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99200916-2	4.14577711717132	0	1.41621797476953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-143271827-1	1.14808959143021	0	1.75008611635911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31130958-1	2.87677826666512	0	1.39554283724688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53258902-1	1.51613501080121	0	1.66766741624448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133166549-6	20.235430417645	-0.781225125148409	0.446094057640605	-1.75125651590231	0.0799017343442044	0.793601019041953	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71769556923633	3.94061828607753
Merged-chr6-88821060-3	5.92212558025574	0	1.39698959340001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59925404-4	7.09528185600231	0	1.36429534106349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44539114-5	14.4792230944798	0.107641701182754	0.453457162575235	0.23738008805825	0.812361935749644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90293024025087	3.98820738767787
Merged-chr9-48163230-3	6.12094442225981	-0.390209495143046	1.07276412122594	-0.363742119467158	0.716050587906787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.662147012823607
Merged-chr4-105306211-2	3.54609919986553	0	1.38045243002141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64919451-4	4.98497714592939	0	1.37443397341386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31399458-2	3.39459428641945	0	1.4932350226577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34541171-3	4.24460437887332	0	1.44230115769743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23758241-1	4.96289325388502	-0.535188363902437	0.701565436202754	-0.76284881820741	0.445553562982058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	2.47549643264008
Merged-chr16-32651208-3	4.60330936470734	0	1.40028654519712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-141038554-3	7.96600236258805	0	1.40581177489994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23790609-5	14.2921033561331	-0.169273932707982	0.527282399989199	-0.32103087967937	0.748186989839226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16063286002871	4.01728927202019
Merged-chr6-145767167-2	8.54557214742628	-0.0875875112083766	0.696745871394061	-0.12570940827124	0.899961954228932	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04002873292877	2.79345055909267
Merged-chr5-114769732-1	3.17923219446367	0	1.43584074597115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48862093-2	4.08113155255739	0	1.40089634714293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11411925-1	3.69903262416157	0	1.48751576797943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164867842-3	10.2662635713754	-0.314881654408049	0.558977110012397	-0.563317618499738	0.573218623008134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67982718132204	2.84226508987429
Merged-chr5-24044094-3	6.89469586349848	1.77436390677552	1.29080982937682	1.3746129494785	0.169251471792086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr4-3511685-4	5.88219654530114	0	1.36790962561139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54494393-6	12.2281033060857	0.210001200255366	0.501602782844199	0.418660357234489	0.6754643717658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94614781226369	4.23875108215534
Merged-chr4-101223300-2	3.95805609055804	0	1.3778338641672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112259632-6	14.8208636845517	0.353632785697325	0.53494083181328	0.661068971868574	0.508568082646486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18272394346079	3.71632157349033
Merged-chr6-143361528-4	5.67135640219767	0	1.3745469916139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11694329-2	2.70176528329928	0	1.43467621334045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120579447-1	3.64348750800967	0	1.40490758171157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30636490-2	4.73529181212393	0	1.41850825893293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160336830-1	3.25949484672311	0	1.40656445971668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46563378-2	10.4222110742249	-0.727843365035583	0.481101454748617	-1.51286876780677	0.13031299664778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61046515730818	3.88658682472053
Merged-chr5-115534411-2	3.35202241564848	0	1.4581071799381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50364785-2	3.7342547999868	0	1.39834604027236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96413697-2	4.84869348342169	1.50349293588471	1.2385388798628	1.21392469815018	0.224776480575931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02748994520012
Merged-chr8-126588073-2	4.05330826896088	0	1.42959469799081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94341606-5	16.585993771427	1.64181517074593	0.56088375520772	2.92719330075425	0.0034203622412189	0.0939548115771772	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68080201688319	4.91577108087153
Merged-chr12-10689136-4	8.78529318963927	1.28378555729302	0.830218417095505	1.54632266745455	0.122026660225114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26085595654656	3.93419977301309
Merged-chr12-79912466-3	3.99400691498075	0	1.40293695735507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27718907-2	4.62642301395903	0	1.367031306518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55103727-3	5.47382994616702	0	1.39322719451935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61321696-2	2.7900416334929	0	1.42898729938858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41267982-3	7.60050327411424	1.95702801243969	0.854925624637031	2.28912077968253	0.0220723357913766	0.343790859966601	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	3.19638476400913
Merged-chr16-87607601-2	4.79278675963273	1.71904074125478	1.29592038399062	1.32650181484237	0.184673534398119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.841757702988201
Merged-chr3-115644505-1	2.36582872796676	0	1.43573673208751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-56428383-2	3.38804879689712	0	1.39762987810873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118702404-1	2.12815652113443	0	1.45576178891417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43919943-1	3.02092697848008	0	1.45649619267501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32744848-4	4.73893592192306	0	1.40449869704754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156540368-1	2.42331621476801	0	1.45263854946752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111124965-1	3.19821923267386	0	1.45311946954451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34749919-2	2.93227975177597	0	1.44770496959631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-40368100-2	3.41666286112953	-1.04752531154531	1.02962950122659	-1.01738082513895	0.308972300174259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	0.788686275880602
Merged-chr1-74243019-2	3.87745378577449	0	1.37762407183468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-81044377-11	31.4742183464023	-0.0888043359426973	0.370566168214884	-0.239645017704912	0.810605462392947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.42381403571309	5.39193977962402
Merged-chr1-80660652-3	5.38411698740732	0	1.40579958889063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34256820-2	3.28650450226838	0	1.3852191012865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-54118614-3	5.47192768739192	0	1.38013084308238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155708760-4	5.46278255796993	0	1.36993493803106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63417511-4	6.22177489337971	0	1.3723605939146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121898278-2	7.31075603329501	0.176241047530095	0.966275650860202	0.182392102474279	0.8552750231692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	1.62518823153097
Merged-chr17-27588491-2	10.2870114171376	0.634675829411488	0.604860247576274	1.04929333999827	0.294043130318083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49543344361845	3.57855262542423
Merged-chr13-92320941-2	7.21018123055011	-1.87082982176051	0.835188691270773	-2.24000856490761	0.0250903668388747	0.37551690879676	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35979880313945	1.56533893459231
Merged-chr3-115644118-2	3.95947531531285	0	1.38430583502006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59220622-3	5.03459231283262	0.607451118977354	0.900659759132349	0.674451270658015	0.500024456108811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	2.11642553550219
Merged-chr1-167231232-3	3.97050478936442	0	1.40110173742597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33397264-1	3.15486073593431	0	1.4075307852502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42171201-1	1.88204967196357	0	1.44471852356677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-36952361-4	5.53126207207318	0	1.35316886095391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55341972-1	2.6073952981455	0	1.51108705419599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105316662-2	10.0341847269728	-0.730714447265186	0.543321704839856	-1.34490199959997	0.178656884425103	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03035381686409	2.74389777161424
Merged-chr2-21065187-4	5.34551674725944	0	1.40225693598251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69666914-2	4.17524530997691	0	1.41118947313273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44926501-2	3.5437564390179	0	1.38111503937634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71292117-2	4.83217466260409	1.27261821712767	1.33907629926311	0.950370205064485	0.341924177796901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr7-18873529-4	6.43037287297491	0	1.37279433584844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63906699-4	10.081846525984	0.563199612698541	0.77240201281785	0.729153476236936	0.465907786183126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.97252535716306
Merged-chr9-119261958-3	5.43278587467303	-0.915735815481935	1.04930265640517	-0.872708946167327	0.382821740239052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.723581231604105
Merged-chr7-114817724-3	4.79030510502195	0	1.38257239158394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101584355-2	8.11314551546905	-0.341212077513998	0.683396277119118	-0.499288756667493	0.617575974701961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31805786227732	2.50699023263474
Merged-chr12-85589466-3	8.26222140853928	0	1.36110663875059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136559950-3	5.56585412594756	0	1.37601133292258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84794133-4	7.67261500389555	0	1.39351018276157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81127240-2	5.0825230192603	-1.86643552764847	1.28650902742987	-1.45077530577235	0.146842438076186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr19-56726613-2	4.51315094307241	0	1.37713430975801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145026919-2	7.08254975949718	0.821101560309006	0.900110774447459	0.912222788148544	0.36165145021073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	1.72240195265986
Merged-chr6-85402938-2	2.75351132685899	0	1.41718698810095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62344429-6	18.0049086151369	0	1.34309103376343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20209060-2	4.2847449444114	0	1.39162901912564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-61958403-1	2.04554862855975	0	1.51680063269782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56313130-1	1.47272082385196	0	1.49561603798927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32823096-1	1.86473857814181	0	1.65176891059754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128414921-2	5.01207295788514	0.931751010261036	1.02338208061558	0.910462502627146	0.362578648289335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.40024388691264
Merged-chr3-59079474-3	3.54450051185699	0	1.37722912628233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-47954464-1	2.55714883256573	1.58037296012726	1.27525965274227	1.23925583055097	0.215250770507719	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.882176137820124
Merged-chr11-121342909-1	2.72474559804221	0	1.43239714884082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12911931-1	2.8892438680115	1.78826887973076	1.27414362118967	1.4035065199801	0.160465849101299	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.59708520306594
Merged-chrX-159864521-1	3.20378214415416	-0.0343549449649115	1.13450575215142	-0.0302818605368573	0.975842263133196	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	1.06633037676026
Merged-chr8-54671997-1	2.38513138828545	0	1.4846516820622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102800998-1	1.89510464287095	0	1.67772512601458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25310834-2	6.46353930739992	1.38294930322885	0.760051061943399	1.81954788628641	0.0688278840605266	0.724518774137522	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12752229043697	3.7994400661303
Merged-chr3-138893708-1	1.55772985279742	0	1.60217393521875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10039026-1	1.40317904801091	0	1.54436773646478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32717201-2	5.75164635266382	-2.32931835144302	1.22321533576862	-1.90425862342493	0.056876510133671	0.644338782439875	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02668663915985	0.413263464506793
Merged-chr4-105247740-1	5.91492991848757	-0.582988521359376	0.839512374358167	-0.694437079388006	0.48740814707417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98039756206361	1.75397137748192
Merged-chr17-84978661-1	1.9287416991858	0	1.44988829829358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20932337-1	5.32672585005548	-0.545305146207862	1.23938284616802	-0.439981195394032	0.659950726985073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.55634759613363
Merged-chr17-3010344-1	1.3567154136745	0	1.69307627992473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6704963-2	3.89819673382063	0	1.39407289752271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133088022-1	9.29354044252374	-0.428940948733745	0.492034464963921	-0.871770128470975	0.383333793705943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24974768267758	3.86637316456241
Merged-chr1-157095725-1	4.64660502868012	-0.834073066149274	0.778618900673133	-1.07122119104507	0.284069985464788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29789583421244	2.06736494025839
Merged-chr8-34895313-1	3.60010278907659	-1.44873483250793	1.07084363016698	-1.35289111472048	0.17609041838458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9272926343824	0.577068348605183
Merged-chr6-148533599-2	3.38579614141646	0	1.41108736359946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149245617-3	3.78718180965124	0	1.40228236453031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-96292063-1	1.63412041902358	0	1.50048141006173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-47088902-1	2.24763259539528	0	1.51069144283079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143997516-1	2.92244844873999	0	1.51870434825967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92667762-1	2.4366658191654	0	1.46976813176702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47362370-2	2.81269399069347	0	1.41219632670487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41443782-1	6.5386733592049	1.24426712049484	0.89371539033263	1.39224090124681	0.163849460954768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	2.44804606734033
Merged-chr10-79835004-2	3.55409586349936	0	1.40027646630748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83929557-1	2.01227456235188	0	1.46171177734281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68875027-2	4.42809151675159	0	1.36993596219542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62385612-4	7.73845335083503	0.0802480214316993	0.643897584526035	0.124628548639096	0.900817626055161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71411328282536	2.75363610327158
Merged-chr2-26561850-3	4.92190514870516	0	1.37178990213862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98003332-2	7.46063591585514	-0.574001445982384	0.602505348786085	-0.952691037745755	0.340746635579111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85672575225997	3.35761434381966
Merged-chr10-60246733-4	6.55081280281196	0	1.35516184474941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111134744-3	4.90799834262887	0	1.38223662735924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96541037-3	3.36882053300701	0	1.4158102932967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35021347-3	6.59999077444147	1.18223391847385	0.746692006136638	1.58329526599688	0.113354181425232	0.982433027438486	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76550025052025	2.8016533971498
Merged-chr11-46269142-4	5.41441578349807	0	1.37100195554028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161190451-4	16.050694939605	-0.430241109693875	0.560655486820385	-0.767389457176061	0.442849994966364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68165587200898	3.21660667011382
Merged-chr9-110297277-2	3.71483348275894	0	1.41378213491282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82787573-4	6.16842962330875	0	1.34862103924793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105869486-2	7.86523275368918	-1.89547790919431	0.780965158258197	-2.42709663696372	0.0152202011079883	0.269771869984982	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35126154290291	1.63990324542946
Merged-chr3-16192746-2	5.74939453238609	2.59619843485426	1.26406302308597	2.05385205281628	0.0399900131531985	0.507240561847799	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.84656301641358
Merged-chr12-56336750-4	6.18432399920237	0	1.37347546641778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58179783-3	8.5919232704525	0.215164136241852	0.669492128522197	0.321384116519479	0.747919318393032	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53487809165109	2.32700461269991
Merged-chr11-88994406-3	7.87051702631059	0.574541945871717	0.830344716422435	0.69193183807702	0.488980135334847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	2.57808039585857
Merged-chr4-143155242-1	3.58136769637362	0	1.37072287307747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151073544-2	4.89907090128747	0	1.37106516490112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-43339754-3	8.35120971174767	-0.25339840520129	0.63443474311917	-0.399408147094007	0.689592491863946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29588009984668	4.17693088430738
Merged-chr9-47671259-4	10.7302192551264	-1.59654337105822	0.578143448869378	-2.76150040994226	0.00575364443683372	0.136545594734334	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69902509787229	2.93399823058711
Merged-chr17-71161773-4	6.72580063908145	0.301875982931981	0.703001029163114	0.429410442387756	0.667624555774346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09311265642062	2.74339089857427
Merged-chr8-108742898-1	3.02314356361823	0	1.49115520595653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142394819-3	5.07052335186547	0	1.38045311760401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80753514-4	3.98725617072572	0	1.38433248718576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136553367-3	8.28141852119536	1.13771264659762	0.74347777775638	1.53025777048903	0.125952936719401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86170925882537	2.58115920786452
Merged-chr1-16295072-3	4.24220528242977	0	1.41219837147289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-11629501-3	4.23838176788589	0	1.3858380003199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89300018-3	4.69828342909527	0	1.3769066217747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161346701-1	3.57117314328237	-0.0903312890758726	1.23839413998873	-0.0729422775504206	0.941852050907789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.878778741524029
Merged-chr11-94716962-3	4.02165286881811	0	1.36298201282583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37105107-3	3.18152421341626	0	1.47667420212788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58343354-1	3.26161490905264	0	1.38171579859107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93543879-3	3.78598215317974	0	1.38257434096246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-140625126-3	4.98412737530795	0	1.37855840468036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108910545-2	6.51665938863144	-0.68992189555045	0.759691457052878	-0.908160660680469	0.363793345069108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27589464621145	1.56379394835609
Merged-chr9-121348228-2	3.58996082645311	0	1.38374808762982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50201752-2	3.95970247061479	0	1.36752158599848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40476342-4	5.82092096747429	0	1.37489890007096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77444205-3	5.14050486100621	0	1.35761538377211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24082013-2	7.45417264788587	-0.56113546141301	0.837216119698136	-0.670239676722101	0.502705014713891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32286782008582	2.74907789529903
Merged-chr4-133200507-2	7.00537119184451	-0.578540465286731	0.921721337782657	-0.627673941756083	0.530217559198525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8405601103675	1.14143228603163
Merged-chr16-33546567-2	5.37737983216535	0	1.40886186981361	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91986255-3	4.41261814121727	0	1.4306405730747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41084920-2	8.75955345064617	-0.238874679975495	0.571315689263095	-0.418113285640037	0.675864291775116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59615038138748	2.69704594719853
Merged-chr7-80455756-3	8.57050786299259	-0.512842256951033	0.887267195456489	-0.578002048962468	0.56326273589426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	1.18909650862134
Merged-chr13-100517880-3	4.64143346516272	0	1.39855129224415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90490900-5	13.2194935500218	1.66499963282312	0.666121882316428	2.49954201629455	0.0124353951978822	0.234550883956168	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	3.5028427533378
Merged-chr6-56756346-4	5.74295355725337	0	1.37746466196792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69299873-4	7.33007903667236	-1.29963305217222	0.910741888431832	-1.42700480638922	0.153578509231354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49065419848114	0.97908007631626
Merged-chr17-42857748-5	10.6576474557427	0.725646777598153	0.561429657268873	1.29249812189853	0.196184695915541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48791958892649	3.79169476182545
Merged-chr1-182906928-1	2.0686004718131	0	1.49600168305179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-56062240-2	4.69501644703311	0	1.38666537653881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22782886-2	3.21833644023284	0	1.41501095780169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137017384-2	3.91771218657864	-0.0355266115806419	1.42003379032139	-0.0250181452179396	0.980040490347163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.376242425970964
Merged-chr9-21469202-2	2.30067538698056	0	1.42644200636622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16046081-3	4.58427243706046	0	1.41569787888945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92331707-2	3.87998272510188	0	1.39730919931901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36707556-2	2.06866084432684	0	1.57656167323537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124707508-1	1.85534705541355	0	1.47219277119705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126599593-2	2.42035722493289	0	1.47872966303018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75872746-2	5.68935675396546	-2.36627989168429	1.17074026758401	-2.02118262880584	0.043260863252377	0.533973039404169	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	0.413263464506793
Merged-chr1-107506068-2	3.50198402445002	0	1.40401141671131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144294535-3	6.83898518084389	0	1.37425759359346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77288290-3	4.19252394288363	0	1.40892103909468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-7447003-2	4.76882314712918	0.525676307447374	0.917995066622413	0.572635220558972	0.566891707118759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	2.32937334132141
Merged-chr2-72842031-3	6.47244392188779	0	1.38852821269489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53107751-4	5.18740804298668	0	1.37866631528468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45581576-5	7.78298118684608	0	1.35982602517234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120233782-1	2.60593747300766	0	1.53028961287823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114805157-1	2.83989170309896	0	1.45227892592002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22152961-4	4.93719140031885	0	1.37080453784985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63044282-3	5.08418376615537	0	1.37636553205692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55098550-3	4.06709012398516	-3.29307598974239	1.1852088683142	-2.77847734503233	0.00546143215499553	0.131828592590321	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15118048328457	0
Merged-chr2-148529074-4	12.7314294611652	0.303271912121702	0.577758631685038	0.524911088281288	0.599645000830748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76422101948024	3.52101274933715
Merged-chr8-68175284-2	9.58683365977726	-0.026232228046881	0.604081741169914	-0.0434249643038002	0.965362777831087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39186914153004	3.05881266837101
Merged-chr13-13415616-1	2.98992544253101	0	1.42532239995827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121842470-2	3.61348208967583	0	1.37270855286395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-37279058-3	8.90909896547841	1.20201979226442	0.646354932101396	1.85968998233908	0.0629294001518612	0.687455639641283	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13178612559225	4.29968149305153
Merged-chr2-163760870-5	17.5552371798849	-1.58516104948497	0.468281923909575	-3.38505709605622	0.000711634504098732	0.0278778210301697	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37180052659128	3.63938555102351
Merged-chr3-133582177-4	5.97209488145898	0	1.37005504990103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25848189-4	5.35582502166809	0	1.37407836777667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131116121-3	4.5159321372141	0	1.37512307181215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162405753-1	4.15008776781384	1.79070112980852	1.33766698577689	1.33867483375806	0.180676552485268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.903978167044898
Merged-chr9-4380775-2	4.29340708891014	0	1.39245206216016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64100368-2	2.64311597165069	0	1.42775206945034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177726250-3	4.09820631243281	0	1.39259431995156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83440963-4	5.39695475358785	0	1.35479705927783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54866898-4	9.50369162320866	0	1.38870289430092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57761496-4	5.63287705472811	0	1.356709102549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61894219-2	4.34124151116979	0	1.3709010351438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119968003-1	4.27054883172143	-0.0384821314388662	0.846030515842194	-0.0454855123051425	0.963720322452599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70317705787455	2.67558875203953
Merged-chr1-159202024-3	12.6419762842871	0.651883641779301	0.548023625910158	1.18951740574442	0.234236125842191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02198840298032	4.74234384195609
Merged-chr17-30519017-1	1.39987683500263	0	1.70307593011403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191088094-1	2.56718581214339	0	1.42456529900496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137025310-1	2.9641644059969	0	1.42534293844191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129480301-1	3.02238079967375	2.04121991744159	1.2667586461507	1.61137239808408	0.107098579563914	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.61224616757942
Merged-chr19-21407836-1	1.47651477324671	0	1.58290332049583	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-122193868-1	3.72572949426046	-0.718124978801872	1.13026826026941	-0.63535799778249	0.525194955348427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.859510663435501
Merged-chr10-98778504-2	4.19159032799227	0	1.38803995593186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85164546-1	2.8037160533147	0	1.40990235918288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-43624590-2	3.05245804101983	0	1.5031669861038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62761888-1	2.63770741332095	-2.898492120206	1.32306308555673	-2.19074370061979	0.028470344776566	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0
Merged-chr5-23419438-1	3.42309598685452	0	1.37439640874906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104606934-1	1.56537679127838	0	1.6044394091789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35848474-2	3.20964774197554	0.561627340555381	1.2527284829018	0.448323278524357	0.653919902837424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.17788344834821
Merged-chr4-34226676-1	1.67467583215093	0	1.70899312105266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-69557269-1	1.29649139584001	0	1.58599576731931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16010033-2	5.39371641786396	-1.48206728764409	1.06801985988468	-1.3876776484326	0.16523522517191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58180101474665	0.878778741524029
Merged-chr10-115806121-4	11.1056897263289	0.24239370399118	0.449529048721656	0.539216997612246	0.589737133188151	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89123713795275	4.0891614819306
Merged-chr1-182907489-1	2.15019692930822	0	1.55940066702988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-29838882-1	1.88466530392179	0	1.53871902608342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-153835039-1	1.28857646686849	0	1.93041254104006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79324240-1	1.63796690013963	0	1.50307602815691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-29445278-3	4.55098680625357	0	1.39050039439877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20181537-1	3.49444941752234	0	1.4049222494915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161360751-1	3.06800335313115	0	1.44285519861537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8389720-1	2.95152564849557	-1.34525249618669	1.42680529098202	-0.94284237988829	0.345761530944042	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	0
Merged-chr2-3630971-2	4.35394965381469	0	1.37297347152973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88707629-2	5.8087794924528	0	1.37297373582938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97296907-1	5.12335574850119	-1.76348477231276	0.843757990006762	-2.09003623455895	0.0366145448926325	0.480640538736569	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58212787671401	1.4068548238317
Merged-chr12-91877814-1	2.89575151360486	0	1.4597690964029	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97651464-1	0.863473913049	0	1.79988172674776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50364384-1	3.15198090711927	0	1.41265326034506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-89597259-1	2.56234924210316	0	1.46060578607053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100983710-1	1.34845829762174	0	1.68529154632443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84594613-3	7.05290580280685	1.45022695782952	0.884916288012088	1.63882954520745	0.101248764140339	0.917602795916088	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	2.30489401732254
Merged-chr19-25628704-1	2.42073428512686	0	1.38692093229018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83301839-1	2.48444709892146	0	1.42257960044716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150374827-1	1.04888371292194	0	2.41677965051485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21759499-1	4.41330514164359	1.99343774683448	0.915451285340513	2.17754650493827	0.029439815941173	0.41849345050895	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09282686802642	4.16327666199165
Merged-chr10-117939157-1	4.12790214693428	-0.0804633923594688	1.28104255755426	-0.062810865950533	0.949917113178774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.969611060640422
Merged-chr19-16009422-2	2.98147535517879	0	1.38609790305931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191333083-4	6.34115573797067	0	1.35280285518268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87374324-4	5.22514311287903	0	1.40228970891419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69204777-3	5.76798240083567	0	1.38304696061503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70894228-5	13.9266916389728	-0.538515608710495	0.563791045238442	-0.955168786837937	0.339492347668731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37126433462253	2.41031217304274
Merged-chr19-36818913-2	9.15217170162549	-0.760598279914691	0.597152248414449	-1.27370914525437	0.202766514162148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00186043763923	2.75744914098157
Merged-chr1-161166429-2	4.61844487289232	-2.89648405023516	1.23729203814704	-2.34098657465937	0.0192328586950443	0.311926561131838	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65880184244346	0
Merged-chr9-90261505-2	3.369795231134	0	1.42626746791847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20655140-2	3.34612335456814	0	1.39830478795324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3742639-2	3.75951103439106	0	1.40661211561511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75149484-3	3.51712635585626	0	1.39334347288155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67506557-3	4.23151366481976	0	1.41227287234387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105815434-3	3.20017287067339	0	1.40202843160594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72412262-3	11.0855407044424	0	1.34880524702402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95800280-4	5.40039227103071	0	1.36373612972845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70074841-3	3.23203784054485	0	1.45137565878512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163751160-4	6.33495419070054	0	1.35892096798664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151963593-2	3.21265226931223	0	1.38649670276997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127586394-2	9.16480838175081	-0.0365275902348628	0.594266013204769	-0.0614667327816312	0.950987507685473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2743046022172	2.76989761311999
Merged-chr11-113335044-4	14.7003201149175	-1.50893423971096	0.396043100110439	-3.8100253212092	0.000138952559544939	0.00772323331728359	C57BL6J_F1_Control-BALBCJ_F1_Control	5.3001434509998	3.12615216817105
Merged-chr8-83089809-5	15.3603092781988	-1.27187608439944	0.498022991503075	-2.55385013563492	0.010653910115445	0.209831847813578	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82378300829528	3.40996901830818
Merged-chr9-83599680-5	13.4462244931159	0.675927621184195	0.537782173373737	1.25687993141129	0.208797116526137	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10776955816383	4.88608158903268
Merged-chr3-52243835-3	14.6198066549696	-0.579347305434655	0.518424327332571	-1.11751566215179	0.263773906707109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89442010935159	3.55373999111718
Merged-chr2-117962871-4	12.8899164157725	-1.14577584473849	0.663097868034034	-1.72791363081216	0.084003710158827	0.817667284292425	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83141759251398	2.42804561681696
Merged-chr4-153922611-1	1.73561442602816	0	1.5319858813386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98157245-3	4.35501143908029	0	1.36498552986106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130861794-3	6.59669253666396	0	1.36562308527178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39056094-3	3.92474927136743	0	1.40348134297974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109245801-1	3.6074296586282	-0.692081536627367	1.40422837003583	-0.492855401155089	0.622114761940326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr6-84796491-1	2.69759753045768	0	1.44308283845069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-103580379-2	3.7033620313684	0	1.38846250253695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13170132-2	4.00742304992406	0	1.40533849204157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3092967-2	4.96502862858367	0	1.35972446374299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30986229-4	7.10757319630564	0	1.35483440213512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7849979-4	19.4041065993085	0.135917322816077	0.441324765919877	0.307975743289132	0.758100789892345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07839254932197	4.44389122191134
Merged-chr6-86822753-2	4.37038927518143	0	1.38050153836587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54601745-4	8.38398731278566	2.82759076520039	0.883683735572531	3.19977685610386	0.00137534024524972	0.0462065020961246	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.85336528620953
Merged-chr18-61378452-2	2.59607148632093	0	1.55454132941904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167233513-2	3.71861533414011	0	1.37904763804616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90408898-1	1.77594860307117	0	1.44295743346219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110957205-3	4.48460238619202	0	1.3884659486106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145013486-1	2.42269509554863	0	1.42893999154573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97948891-2	3.04031469527915	0	1.40476029738304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35178585-2	5.05501900010992	-1.31045083715275	0.895831381182541	-1.46283202919605	0.143513346566836	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30437869478391	1.27673210875742
Merged-chrX-155174849-3	3.73652068815317	0	1.37557720461929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50609294-2	2.66553181777744	0	1.44131828783975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30847693-2	2.301956290012	0	1.52643912627806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28242323-2	3.83244582246333	0	1.37568686021106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82894599-2	7.03254638199405	0.484207299003605	0.915247452769272	0.529045229832145	0.596774074203632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32190966491666	1.82804996404061
Merged-chr6-115470044-3	6.22269475720728	0	1.40369679702301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80774801-3	5.57820307233468	0	1.37867364383031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17633070-2	4.4719091963204	0	1.39344820355643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102516720-1	2.127487688316	0	1.66656991277744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123293193-3	4.16527772419359	0	1.39580432546578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50375812-7	12.5006700298872	-0.695321879557838	0.476736053027956	-1.45850492141626	0.144701419610869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2436692631392	3.03605800315955
Merged-chr1-53820283-2	4.9783883464419	0	1.3608635994986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94074554-2	4.78442907789294	-0.821430895215805	0.854864018476709	-0.960890711811127	0.336607121425249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26673910123384	2.2200817938085
Merged-chr2-165997766-2	3.5188461112029	1.79957112485687	1.31094903786841	1.37272393729581	0.169838184690173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr2-117984770-2	3.44597953591481	0	1.38792053417949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92435065-3	4.62377486326265	0	1.43409654380423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39650884-3	8.65319652652971	-0.347197283130636	0.798199249942406	-0.434975707075255	0.66358006069248	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	1.45526469271556
Merged-chr11-108104229-2	7.41722189979585	-1.02142710893871	0.749837303636362	-1.36219831153407	0.17313530855517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78908037547275	2.40379026893799
Merged-chr13-60658332-2	5.75883493930797	1.89635549186972	0.880880575660072	2.15279521908939	0.0313347760582745	0.435856471789085	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	3.52671378218086
Merged-chr2-3427635-4	6.92621207923682	0	1.36190961089293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156449251-4	9.07904122611139	1.25609814687587	1.19123642175258	1.05444907823407	0.29167736266128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.32514197764128
Merged-chr1-160911058-2	5.80352478251782	1.11504295665849	1.28194467321809	0.869805834802044	0.384406522287425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.67591700901439
Merged-chr8-83767577-4	13.1866475213038	0.493100252452511	0.571915911021196	0.862190127866956	0.388582901306906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91204565261509	3.77088933763853
Merged-chr15-73613960-3	4.35620755113278	0	1.3820337163121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41615615-3	4.25002755642656	0	1.44376498242703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31611231-3	4.91340958937504	0	1.37364683241519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106491592-2	3.58716405199151	0	1.37208285219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20103872-4	16.1794214731365	-0.403717207670728	0.474340737272993	-0.851112240520848	0.39470700647749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63976460151806	4.14597469142874
Merged-chr5-148332776-2	3.69657509821084	0	1.41744478380815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20370967-2	4.5857987013372	0	1.38118291079976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131678225-3	4.44359274033477	0	1.36931666748768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78402056-4	4.87865185942281	0	1.36950894456055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10291952-3	4.83455625763297	0	1.37899672537387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116777244-5	14.4528017018624	0.0497573276066567	0.45292558471975	0.109857621837469	0.912522291923659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86983385304644	4.93967492622821
Merged-chr19-41797019-1	1.61324829324597	0	1.50208937373826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23454145-1	2.80393116776521	-0.0353252326033358	1.35620784550117	-0.0260470640400121	0.979219799494392	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr9-47899967-1	3.17420441303053	-1.79378765641787	1.17740973932079	-1.52350332812148	0.127632828691795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67936189233912	1.11893902259477
Merged-chr11-106202306-1	2.77670720697603	0	1.43395953342912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114494219-1	2.04260121125882	0	1.46972713475825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6639782-1	2.91643160221301	0	1.3958090906693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113426104-1	2.21908231319961	0	1.42949941180054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81274489-1	2.53487459542958	0	1.41383763080781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25468112-1	1.9008157601434	0	1.49633622779743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146209553-1	3.12724593054	0	1.41789650202792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179398944-1	1.43678015418333	0	1.65996382762806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102816031-1	2.84154809172177	1.72469804250325	1.18715764107518	1.45279614335062	0.146280363078979	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.53933126993545
Merged-chr13-76395821-1	2.52938044917534	0.488952836826159	1.0259242371034	0.476597412501599	0.63364882629048	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96144955975915	2.76564303705501
Merged-chr17-25006672-3	6.65348308009911	-2.51226239863757	0.797018154720366	-3.15207675478734	0.00162113653410124	0.052642389998333	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76805226183467	1.27992882773773
Merged-chr8-14952477-1	2.68902106096803	0	1.38533590338794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123468842-1	2.51485520621619	2.05200228396797	1.36232864254257	1.50624615815038	0.132003994191573	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.97656658922368
Merged-chr1-106697740-2	3.03604079040226	0	1.44656629648178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61370946-2	3.85305390626417	0	1.38004747500718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130660145-1	2.12827597481272	0	1.44830817035637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97021960-3	4.2009600544792	0	1.36702070363581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25371164-1	2.48499008001287	0	1.4617645132655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24015973-2	4.54041294864428	0.380959696184656	1.10024125367407	0.346251056222903	0.729154047632255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	1.54726712393679
Merged-chr7-120883869-4	9.29095407482091	0	1.35610727192947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85138709-2	8.79354961461333	-0.622198148437252	0.552678585497088	-1.12578660502584	0.260255855281028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1303182756009	3.54583233211075
Merged-chr8-70585446-4	11.3984345705701	-1.03457815835585	0.553419224977627	-1.86942937950462	0.0615631002879337	0.677842529583105	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7310809366093	2.42272133210467
Merged-chr2-90552668-5	13.5265523247759	-0.88042122201172	0.43847124986021	-2.00793375230966	0.0446503319200578	0.54690117008617	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75975079329104	3.75714215832566
Merged-chr15-50763571-1	4.5568887481805	-0.431285456790378	0.782880475783482	-0.550895660488609	0.581705202424163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08475616112279	2.33494576651626
Merged-chr9-51028839-2	3.75300018379894	0	1.40147421714224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52690133-3	7.78549699303804	-0.634955654957747	0.921423783627287	-0.689102741040799	0.490758615218614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	1.30064958020929
Merged-chr13-3742509-4	13.4503898684382	-0.627048706100806	0.595222010754458	-1.05347029305251	0.292125502504771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17752923195499	3.71999766328713
Merged-chrX-134612678-5	8.92347186644544	-3.02530705701643	1.14958633340462	-2.63164841918107	0.00849717439151514	0.18041451769923	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26637849737819	0
Merged-chr19-41475011-3	6.62447778627778	0.450444993215286	0.806778483973185	0.558325491028163	0.576622141317052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	1.98209264290658
Merged-chr9-40764205-6	12.3509087479405	-0.0576960352478916	0.564415494789194	-0.102222628153468	0.918579967166356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69467888719023	3.5767912337848
Merged-chr1-51517535-3	5.83843315449749	0	1.37215091667691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13154338-2	3.42828303237882	0	1.43871055531335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59246352-2	3.37319235732224	0	1.3972027565701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42477075-1	3.38221101739333	-2.19569257028144	1.33485863302625	-1.6448877176631	0.0999929682624028	0.911235165427654	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38353752608252	0.41385117919798
Merged-chr18-61065705-2	2.63532870739812	0	1.38813143846964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3760603-2	2.90817164156261	0	1.43350488803748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84127073-4	4.49084953118044	0	1.39129470764575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125514199-5	12.6760775086421	0.253900175527704	0.473285744360392	0.536462757547938	0.591638768338633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85373045979867	3.88962157261423
Merged-chr14-32509747-3	2.92463841680252	0	1.50406108352588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90669650-2	8.67473191405572	-0.0593671195550819	0.576668745793279	-0.102948391061865	0.918003931187935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18630051868871	3.05205788606367
Merged-chr11-70472955-2	4.26047429660706	0	1.39429379451341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156014916-2	6.97391325897903	1.04104054495063	0.913200520273971	1.13999118686256	0.254289972834408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	2.71131548304246
Merged-chr11-37136644-4	10.024675128678	-0.222113887690367	0.524327641219077	-0.423616590523333	0.671845453958284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16830038926026	3.98968070108508
Merged-chr4-33271911-3	4.03149585709261	0	1.3890178096755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70833651-2	5.96339256787619	0	1.35355429699005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31817660-4	12.482718000541	-0.835093610928359	0.44787646550759	-1.86456238548262	0.0622427693930453	0.683250141647122	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93385145840596	4.19206855670865
Merged-chr3-107686499-4	4.86521314665569	0	1.41904204747024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67435600-4	6.71370040130988	2.37544432893102	1.12977590619223	2.10258009213275	0.0355024916734887	0.472546509519875	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.4277097602107
Merged-chr7-97129482-3	6.90318050665076	0.448151946658785	0.887560656764218	0.504925430440567	0.613611211918929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41083941945204	1.31037834433945
Merged-chr10-89327100-2	6.39851073022432	-2.56618436503334	0.967220437429603	-2.65315357877776	0.00797435787940359	0.172220150960071	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82103665704806	1.02748994520012
Merged-chr14-121405377-2	3.31234501748875	0	1.38675341339261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72342745-1	2.99790840279761	0	1.39377500721214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97281788-6	24.2088373566603	0.755843836808403	0.371436735518856	2.03491944799852	0.041858978790249	0.523564709631649	C57BL6J_F1_Control-BALBCJ_F1_Control	5.16922178043987	5.91258043562258
Merged-chr7-44072943-1	1.31648438323541	0	1.78804333688104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59548045-2	4.53610985539081	0	1.40068224331719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75880887-3	4.60624802364255	0	1.37147796599012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118232819-1	2.05245948180905	0	1.44543801732174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43644036-2	2.45330617672761	0	1.51966028869665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137685506-1	2.25049711541933	0	1.43117159007294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51123179-5	12.8829959024601	2.52472298988121	0.729740681099856	3.45975365670444	0.000540669773731832	0.0227655059878301	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71989966306259	3.99455913170511
Merged-chr13-60698192-1	3.11787541758106	-0.437925728527892	1.03700513675131	-0.422298514257902	0.672807142483868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21444166002597	1.13341594473881
Merged-chr1-123905958-4	11.4193334679727	-0.19682270415952	0.573013053443457	-0.343487295754845	0.731231896651928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4863534785479	4.26762930861885
Merged-chr14-9468819-3	12.1753124653572	-0.735926379457529	0.517511073540966	-1.42204953107979	0.155011872474856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87019775808559	3.26769260095292
Merged-chr10-89453950-5	11.9949023432689	0.0316904970997621	0.560046595856373	0.0565854650920676	0.954875413168711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35773193731419	2.95356193021792
Merged-chr12-79070109-3	9.61294139683011	-1.93980282590477	0.710020886224171	-2.7320362872992	0.00629442079272935	0.144553620562727	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31790101127405	2.13824616250381
Merged-chr5-77252309-4	9.01379039186534	0	1.37895234681004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150341378-2	7.15313641822601	2.45979607714036	1.04000888741467	2.36516832395069	0.0180218778705276	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.28918762047504
Merged-chr10-39444173-2	4.09274130736369	0	1.38641494260514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5509460-2	4.46502410765787	0	1.42427713593372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5745112-2	4.70065224356869	0	1.40694400777861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15552681-1	3.06674315680095	-1.67358832020481	1.43988115391764	-1.16231003902738	0.245109550233283	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr2-59155553-3	5.12748403703378	0	1.37031902502937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162589696-4	10.4896312992035	-2.00558296020536	0.636814167844121	-3.14940065952849	0.00163605721348546	0.0529686921190327	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50262078896786	2.35258699989828
Merged-chr3-14572152-2	6.83966056740597	-2.43635953650947	0.839410469921018	-2.90246503208223	0.00370238490667634	0.0994848942867125	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69967853707202	1.18909650862134
Merged-chr4-133622545-3	16.4874528039948	-0.49593688469334	0.451633529880711	-1.09809580529668	0.272162656835813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79954570656801	4.08891766373909
Merged-chr1-184807835-3	4.36718045426129	0	1.36912143749553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43393411-2	3.87563601687577	0	1.4514245547606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85659546-3	6.84685338764982	0	1.3607538891475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-100286110-2	4.054950573821	0	1.37744076058238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105841714-2	2.8749905124764	0	1.43322964003485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46365148-3	4.78075072270082	0	1.37839580241225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125439403-2	4.17623797369025	0	1.38951272579655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129504559-4	10.1835547889261	0.0596681700818276	0.776161025854585	0.0768760194009103	0.938722174824854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37232581226066	2.29865629870409
Merged-chr15-74924948-5	13.5698415915763	0.176100975058433	0.557724549450293	0.315749011285236	0.752193022626403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74485414442757	3.00603949309104
Merged-chr10-19064974-4	5.75028726889419	0	1.36187695863153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72123770-3	5.68212461027	0	1.35562288590616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-47917794-2	3.42899366694385	0	1.39234826859529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93265979-1	2.75653499453474	0	1.57372488467964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-16043494-1	2.61298430284451	0	1.40820702960711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108326592-1	2.34505374948819	0	1.46998152195696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98519057-1	2.3445780993473	0	1.52646327034563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72117931-1	1.66927480620838	0	1.51371305489035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77369732-1	2.57612236085428	0.598809711741525	1.39724469805257	0.428564669149307	0.668240061806231	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.723581231604105
Merged-chr1-172246447-1	4.46324171472252	-0.337061549860025	0.995852979281003	-0.338465171940722	0.735012668711676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01529308791303	1.725180588233
Merged-chr11-116220650-2	4.75828826317232	-0.209425920001198	0.854084574796808	-0.245205130945049	0.806297603726197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	1.79061031525623
Merged-chr1-160191445-1	4.65967587049193	-0.403071159023934	0.961954871605669	-0.419012545101143	0.675206964016186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14254818007094	3.41780506045679
Merged-chr1-151657284-1	2.24366752820233	0	1.41885858035937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48526586-3	3.91382852338588	0	1.37835425272384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34267299-1	5.03939867127544	1.83888203578	1.07838098232447	1.70522483790122	0.0881524993435983	0.840871026385365	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84231959469675	2.71270635106964
Merged-chr12-98320186-2	4.37475883374977	0	1.40274729973823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34005624-6	17.253131487799	0.445929489028448	0.442597537688034	1.00752817414624	0.313681025533739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63721856493712	5.37433842656516
Merged-chr1-45922502-1	2.25750392054636	0	1.44551796718533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15345790-2	3.93757908966924	0	1.3977957313144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123065678-1	2.66642490234146	0.615669269363909	1.4562023784353	0.422791006580726	0.672447749851585	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr10-67651773-1	1.91317120025414	0	1.67085029010711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102617802-4	4.8026900990163	0	1.37904413196688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50360837-2	2.54865454672672	0	1.52295876894441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72027134-1	1.6464065104057	0	1.46945027930085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77537171-4	11.0806419568905	-0.978304461609645	0.535721742043137	-1.82614291120346	0.0678287379484774	0.71887353599947	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33817778327621	2.73251391436734
Merged-chr13-113970964-1	2.09551131414996	0	1.53458911095194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77245706-4	5.84071753467382	0	1.35965499412149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146011390-1	6.84867765499075	0.268485726411205	0.589456926884503	0.455479805505469	0.648764092744718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68068546412884	3.92275325478773
Merged-chr17-14921790-1	1.96867469191892	0	1.4804719876913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133170720-1	7.19111715666383	1.20843856590641	0.596121120251656	2.02716952118096	0.0426450790163134	0.52899846829448	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46150677299309	4.14117916317734
Merged-chr10-48301086-1	3.88919642581075	1.79026466646832	1.33918143735492	1.33683503708381	0.181276489675308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9699838995169	3.71863682848343
Merged-chr17-62544390-2	3.86017989009102	0	1.37098991548571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61325089-1	1.93352485811239	-1.64986050330212	1.49531516457895	-1.10335302040937	0.269873889904079	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	0.465515277017237
Merged-chrX-163869104-1	2.30460049376999	0	1.43051518784037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55956562-1	5.4673626738204	-0.301075091797095	0.701784714897365	-0.429013464394315	0.667913426143702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21259055339526	2.47241252483188
Merged-chr12-69733718-4	4.56292013022534	0	1.35909092772265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152617995-3	8.37612498444511	0	1.36265529604771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70194820-4	4.86487769973346	0	1.36469824529927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102622618-7	19.6979885717653	-0.693918019936278	0.380664681153553	-1.8229114869114	0.0683167978693058	0.722215638929909	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68743504909081	3.76514869890059
Merged-chr2-174672663-4	7.69050103904923	0	1.36027583170002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121637981-4	5.35557209681018	0	1.36458804875976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115367014-4	4.645089130662	0	1.36782188110256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155182604-2	3.49209066192208	-1.35068631165607	1.38887922211994	-0.972500913070341	0.330801410861588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr17-47766224-5	9.00500261358067	0.231201944292936	0.776392242784509	0.297790126629469	0.765863350684226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	2.00766992357472
Merged-chr9-90380255-2	4.2088452601666	0	1.40108001254179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22842580-4	7.15500206714076	0	1.36037941462569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55525670-5	15.4475189940696	-0.0611819807736236	0.459074629358306	-0.133272406839698	0.893977949062462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41879657009303	4.36309757718651
Merged-chr6-117580921-3	4.41572283125524	0	1.37327464365608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13912431-3	4.29746899088426	0	1.38628166672198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100195630-4	5.86750269364302	0	1.36501852749386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80776270-7	15.306500804117	0.082073592039077	0.455794427508779	0.180067124751094	0.85709987136039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.407530124948	4.39985193322533
Merged-chr9-83557537-6	12.7408921188303	-0.0508081337564751	0.766013929322536	-0.066327950199822	0.947116731174591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94320493631125	1.84252025419888
Merged-chr15-97884401-4	5.58613865619354	0	1.36720799100802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154907946-4	4.87942002290075	0	1.36179729658542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113289390-2	2.50737267137928	0	1.46854409416623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49425779-2	3.31727034176513	0	1.42731638996649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87584860-2	3.17832780871443	0	1.40665078945841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42744405-3	10.9274613339684	1.92347757415165	0.63771327615009	3.01621064840267	0.00255955377374511	0.0751336879132284	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24517688100283	4.43962813438807
Merged-chr4-5688280-1	3.10771295036646	0	1.41858129213656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-70621501-2	3.60951326965989	0	1.38423992317104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59969490-1	3.35101824369184	0	1.36916981185579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129404005-5	9.20289696319617	0	1.37032094358919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82670786-2	10.0887458874001	-2.28450877630906	0.882114171843556	-2.58981076285692	0.00960287044181757	0.195506529717888	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23819148409518	1.53201863853705
Merged-chr14-17404207-3	3.88838589015382	0	1.42191194363764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57196740-1	7.30584228514449	0.155017065984505	0.956843701809022	0.162008764536389	0.871298951950291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42930447891152	3.07448529664525
Merged-chr13-63098274-3	6.50958460608155	1.20265667405983	0.960287338373385	1.25239251419996	0.21042687268556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	2.4657467976946
Merged-chr1-136600318-1	3.61922437457489	0	1.47392820124516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60887147-2	5.51680124023519	-1.25635689439105	1.02667766179682	-1.22371114239717	0.221061214820231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69484321481316	0.577068348605183
Merged-chr5-81078193-2	3.46313683246608	0	1.37367329636208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154714204-4	12.5973107738097	-2.01474300750914	0.588580558372923	-3.42305395386947	0.000619217852856756	0.0251569979547387	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26046834263776	2.06621232759638
Merged-chr10-58452456-4	3.84940078259362	0	1.40636397450938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78744473-3	11.7717311647187	-0.0705283893386436	0.57706211285671	-0.122219753761856	0.902724982494574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05096235098197	4.17439334497609
Merged-chr10-93370873-1	4.0001195875286	-1.76519804296619	1.18558112665938	-1.48888844742325	0.136516746180033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94283950978213	1.07599819202159
Merged-chr19-47242442-2	3.20733454756164	0	1.44688662246908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103474451-3	5.1558653498418	0	1.3792647631743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84229134-3	7.30291351291973	-0.351811251529212	0.757231128388041	-0.464602204452598	0.642216353329784	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0900981927122	1.76831516661334
Merged-chr13-45372342-3	8.891808808893	-0.970097366629304	0.660659835510294	-1.46837648436733	0.142001985582282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31057003271448	2.83091600201471
Merged-chr1-59895629-4	5.77531121909905	0	1.35629448192601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39173028-2	4.96509232565296	0	1.75949522303287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-44215790-2	2.18923679036193	0	1.56512740128815	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51811961-2	2.85814196180912	-1.35889938586817	1.44842757966768	-0.938189388923366	0.348147090496237	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr16-24016501-2	2.7848942335425	0	1.42175950135098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83639820-4	6.47870555320241	0	1.3722969490503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95565649-1	1.9665350888287	0	1.56734661944875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114893909-1	2.27540537446514	0	1.52697791085799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142408533-1	2.06603612992631	0	1.45119243855425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16035629-1	3.56522897273837	0	1.42636844790772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121307752-3	5.68449460285587	2.78292433956244	1.19127262727056	2.33609358248974	0.0194863647090447	0.314443886484095	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.94927122251658
Merged-chr12-102713362-1	2.61590165843217	0	1.4434028292731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64143361-4	4.94882799873958	0	1.38020517015938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37340151-2	3.03334597525664	0	1.42500909863849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106673091-2	3.79151743272067	0	1.38432146010212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86041031-2	4.20524111177159	0	1.39897632088982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31440919-4	6.1592835081101	0	1.35471201180914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38227900-7	13.5562981792494	-0.0304125472546949	0.532199863356019	-0.0571449738128741	0.954429711010526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21439454194604	4.20514366244345
Merged-chr2-90894475-3	7.57083566338559	0.119362659704892	0.870456888599698	0.137126446201041	0.89093084887438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26428495695095	1.2960273170181
Merged-chr7-46059155-5	10.019158130766	-0.654679317930864	0.55729635022316	-1.17474180060341	0.240098030529399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53041829676374	2.79941410944385
Merged-chr4-155095470-3	4.72739586722513	0	1.36855860407522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146921413-3	4.64462246007256	0	1.39216276271974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121718612-4	7.09837372380596	0	1.34871647521517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12213793-1	2.87184341746492	0	1.43157324788575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72376226-2	4.39868612069294	0	1.39361711755954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-28189893-2	4.73984837144684	0	1.38645453925151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80408719-2	3.31468955794385	0	1.41932259960449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55101927-2	3.01569222681546	0	1.45785314104823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6178624-1	2.29499636964306	0	1.48446994767496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111083684-2	3.8425753084783	0	1.40753546171475	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144447280-4	5.71606054728665	0	1.3605943573351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72685053-4	5.88628787119479	0	1.3607338035315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55767558-6	9.36141703519614	0	1.34507780437285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73007602-3	5.30348651082974	0	1.36759113274783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80177612-3	9.48484672033804	0.670061411885867	0.833619326327677	0.803797837602533	0.421513738826363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09282686802642	2.80215321627477
Merged-chr12-80668495-3	7.78599089172474	0.252527431271141	0.717030437784942	0.352185092799201	0.724699455905019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95915187330271	2.29350574780863
Merged-chr18-9841233-2	2.70309002909182	0	1.44879784644586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-66999412-2	8.13064138380387	1.26506573516847	0.826341963309534	1.53092277935618	0.125788478631676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	3.23206064634892
Merged-chr5-139373014-2	7.23433860370755	0	1.36878456851857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104789871-2	4.47996391287372	0	1.38767161323421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24335980-3	4.4410092108528	0	1.42261867393117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101217393-3	4.91705110688036	0	1.37425333501969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88426640-4	4.58708136329436	0	1.36448859181622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174564071-3	5.01057677940598	0	1.38290567191351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44669126-1	1.48697741532188	0	1.59377006970456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80937890-2	3.18249284036127	0	1.42827002852884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29370318-1	6.18934487856464	-1.12363440890232	1.07517228867926	-1.04507381815298	0.29598885366701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90215462453103	2.00407882264132
Merged-chr10-26833604-1	1.6300596534462	0	1.52042542478318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28511257-2	3.16219434285876	0	1.41765109070947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116844039-1	3.47506529031443	0.800665256303557	0.942891728350648	0.84915927484497	0.395792671015258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96491903277391	2.48575013904125
Merged-chr1-191585925-1	2.42089762048888	-0.960511719432393	1.53039982817236	-0.627621423990528	0.530251970648058	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86961804807321	0.948471875794396
Merged-chr5-99489846-1	5.07224499141051	0.279486953631747	1.03227666766687	0.270748106961905	0.78658477414998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56835140040331	2.97618723929849
Merged-chr3-138752912-1	2.59075494879963	1.01272530228391	1.55803373955494	0.65000216399242	0.515690823793236	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.41437199749648
Merged-chr14-64329750-1	2.61319221128063	0	1.43990735772864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17175418-1	3.8030699551427	-0.303220919642338	1.10620652918405	-0.274108777739721	0.784001028434134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	0.94927122251658
Merged-chr11-109371374-1	1.99835872472706	0	1.56261097652897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75935944-1	3.27207236810641	0	1.46147775752495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6629892-1	2.24108889091308	0	1.41668409539378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145025336-1	1.03620246717316	0	1.68715561945141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76558188-2	2.88473937462767	0	1.42499023438466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66098423-1	3.07650437432344	0	1.38687652837233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-35948411-1	1.97217769955901	0	1.51669223978419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55806767-1	3.90525162678357	3.68374242426395	1.22602990672499	3.004610576021	0.00265921078880375	0.0773527315560896	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.20145723341397
Merged-chr15-99500388-1	2.81687654009273	0	1.39253599439099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110679990-3	5.70562984240257	0	1.38034980773455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58067341-2	8.13874556955329	0.0672143005948577	0.625961984638014	0.107377607976828	0.914489418033444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63003640177516	2.68642937419158
Merged-chr13-94387063-1	2.00078677846091	0	1.4612795306868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68996450-2	4.57834278943423	1.09997524498471	0.993120825691864	1.10759458117134	0.268036944735468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	1.62438888480879
Merged-chr8-111638661-1	2.49595655638796	-0.695816210259339	1.15561463381618	-0.602117859966475	0.547095686855482	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03951848988522	1.4068548238317
Merged-chr6-134043793-4	4.33886703980447	0	1.42092161784046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45207499-1	3.76632569426458	-2.166523996283	1.0087870870109	-2.14765238788152	0.0317413803529016	0.43848136549009	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2156323711225	0.67591700901439
Merged-chr8-125279087-1	2.77443471337561	-2.47737869008528	1.45516474845114	-1.70247299676697	0.0886667362935161	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0
Merged-chr8-37010890-1	5.26383594805031	0.793854259400433	0.875968362994421	0.90625905333694	0.364798752896084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09435608719793	3.31747141209373
Merged-chr8-84567780-6	20.4649627294308	-0.107294298440635	0.40150161758621	-0.267232543384702	0.789290120972558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09445711478796	4.00611646684437
Merged-chr17-73882366-3	4.78963106475635	0	1.36783158695736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102381770-2	3.5103305841204	0	1.38898741352684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95216208-3	5.66948038900596	0	1.35571269397482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79503881-2	5.00739357580941	0	1.39201962670126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167695722-3	6.42784495937892	0	1.40473488695543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156532916-5	14.811519160022	0.450185255030249	0.497006337404004	0.905793792050392	0.365045007471627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26768156452924	4.54988705875425
Merged-chr7-38074038-4	4.78018508918412	-0.377035974404682	1.01179324874259	-0.372641322595544	0.709415413457306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.990331813111976
Merged-chr6-15626337-4	4.32998174674941	0	1.38303570383275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170307679-4	5.60233059470225	0	1.37350393094964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88099667-3	4.98839785033106	0	1.48583947416779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52048299-3	6.44292965249755	0	1.39613480404686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124790270-1	2.91945460263956	0	1.40640740938447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60532017-2	7.64873952061243	-1.69492870279567	0.989880654655121	-1.71225560861799	0.0868495735338209	0.833412834579061	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19127296633573	0.723581231604105
Merged-chr15-41751549-2	4.80774591392863	0	1.39476144134928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85646273-3	12.9049952150003	-0.304542372776114	0.450895970639532	-0.675416044069243	0.499411474966772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0859766513599	3.73367227085815
Merged-chr19-61151868-4	13.0389575399768	0.954289180320771	0.579694897207242	1.64619213472153	0.0997242080803261	0.909865352555887	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67590589065554	4.71645466999681
Merged-chr2-34610540-3	7.98133418671329	0	1.35686316543264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94167473-3	4.10510913634319	0	1.37407863023664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28485519-3	3.45970042728779	0	1.40206046963733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29297234-3	3.55950085550455	0	1.38324957169505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50774565-1	3.6471946365362	0	1.45757806614399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64088915-1	2.68063875296052	0	1.40909620291115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52541512-3	8.33983672194065	0.439806223428725	0.66310438180635	0.663253381361554	0.507168288257403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24095438322535	3.49172181819036
Merged-chr19-10023437-4	8.46306066010664	0.34050667190158	0.664189836895574	0.512664682574955	0.608185898599707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71289398303961	2.32881231267419
Merged-chr4-86555240-2	3.31817192364239	0	1.37507028264502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4944658-2	4.4714244060166	0	1.47445624586297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104655165-2	3.74551333395127	0	1.37585944803776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138028113-3	7.93732423104224	-1.5904387400949	0.763511271655761	-2.08305862550771	0.0372458801016572	0.485178240221898	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12496497634643	1.67285245412069
Merged-chr4-133905378-4	4.15851381442456	0	1.38364083946578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109685900-3	6.7637168823349	0	1.36361459463124	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12435986-1	11.2253027770606	-0.101666761173015	0.54029666577192	-0.188168403793062	0.850744640155738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60864683942816	3.19528968103156
Merged-chr15-81421728-3	4.39618861017591	0	1.38609924046052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125620234-7	13.711491389602	0.507755093175148	0.500112125267832	1.01528250870387	0.309971179752819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79024521644104	4.34157433378824
Merged-chr2-129408648-3	5.59582625448114	-2.370377939041	1.27827041090275	-1.85436345770296	0.0636871790778459	0.691702570927597	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chr11-17906657-2	6.61366013832071	-3.04842148498081	1.12523460111024	-2.70914303734795	0.0067457250605974	0.152090779165912	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51985556593347	0.413263464506793
Merged-chr12-112797780-2	1.91895064817756	0	1.76817534291044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89423309-4	11.9472431064381	-0.992981986877034	0.52382167944796	-1.89564889319493	0.0580064874427296	0.652658064410519	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12782230264024	3.13166715168782
Merged-chr12-51844221-1	2.83896202107243	-1.27711275693551	1.36303257674768	-0.936964221341517	0.348776962369016	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.600815099743027
Merged-chr18-12947328-3	3.27151246011447	0	1.39476073971904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82974062-1	3.37914067944995	-1.59569785096712	1.40559255994317	-1.13524921548506	0.25627091389236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.303163067301871
Merged-chr3-51718151-1	1.81025599654534	0	1.46534361219463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39427098-2	3.70612597626951	0	1.41659115154266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129501005-1	6.9832402619585	1.60156651355767	0.761103323854126	2.10426950370884	0.0353549446863695	0.471274997107984	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	3.45008754500238
Merged-chr19-21457590-2	5.73126004423283	1.27522382852365	1.357502676443	0.9393895501297	0.347530776251171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr3-59235063-1	2.83428387719957	0	1.40256522431618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111401620-2	3.69525734690927	0	1.39475269323746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27759957-1	2.51669539297079	0	1.45692603476528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160910629-2	3.20193428579391	-0.0347751424270952	1.54430395685518	-0.0225183276081939	0.982034492389347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr6-113099803-3	3.10170677191667	0	1.42731840903945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40057749-2	3.77523991233884	0	1.40379534946268	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88631176-2	4.22333141858422	0	1.40160125859902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159783436-2	5.49026235009633	2.32173810500874	0.878403889333246	2.6431327697912	0.00821428177635743	0.176072611625005	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	3.30137609236806
Merged-chr14-20105716-4	5.14655396042694	0	1.38442556062713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20493876-3	4.43967166221354	0	1.39007215771188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21837808-4	4.67887772914605	0	1.37451173569343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5697432-3	4.83583986279448	0	1.37393379094732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127781051-1	3.82753764566035	0	1.37033032952924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5787323-3	10.4282686439183	0	1.38955711518357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96406728-4	5.82456756260075	0	1.36616971303715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100818719-1	2.55328042875214	0	1.44591365580389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121442502-2	6.91992871765181	-1.4147150504899	1.05760122304112	-1.33766396981076	0.18100600118305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58180101474665	0.67591700901439
Merged-chr17-29437076-4	32.0104102417073	0.280825265465619	0.391392832383941	0.717502320507855	0.473064205106615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37432084987782	4.75257083047816
Merged-chr2-164972921-3	4.90479661994159	0	1.38160095059828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86683483-4	8.94248057110747	-0.759678565254626	0.684978447379895	-1.10905469823243	0.267406586172863	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56043926935404	1.959977234617
Merged-chr13-99375867-3	7.9939068216965	-0.557758680386039	0.622683577546686	-0.895733724957956	0.370394993832326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32438546487441	3.4356098321871
Merged-chr6-134534957-6	13.5664622335696	-0.472669941593427	0.489620554308628	-0.96538010390692	0.33435446313417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39421613905404	3.99721004181036
Merged-chr18-46153224-4	9.9125873810931	2.01441425357296	0.733743326912104	2.74539362702002	0.00604383572150629	0.141184729688595	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	3.4798072169717
Merged-chr6-116014333-2	3.63587323385726	0	1.39753531359388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76304857-4	4.36631576899917	0	1.421578130466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105674793-2	3.99870731762466	0	1.384917866399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10171995-4	4.87561389067185	0	1.38654656368892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56350896-3	4.89103104695563	0	1.3628066804186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171703306-3	3.48562889619346	0	1.45353362049121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124480449-3	4.04693114523329	0	1.38954070741563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102528425-2	3.73221265485817	0.357605934808947	1.34959067697176	0.264973625641333	0.791029779504532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.815775955292901
Merged-chr13-76415554-2	6.57131229736631	-0.0797742626253084	0.836741547194867	-0.0953391915254448	0.924045414078442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06270802590511	2.92210345969275
Merged-chr4-105142219-2	4.81405513560798	1.44226072949779	1.32380288889897	1.08948298994675	0.275940951958658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.16492870185157
Merged-chr11-104387555-2	3.97053358108913	0	1.38634088308764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30246033-2	3.56346584974407	0	1.38826865149532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37315206-3	4.65973779836803	0	1.39700826027203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128059289-3	4.26671884603612	0	1.37682995079369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87207049-2	7.06792380566121	1.36382275165344	1.03077837464183	1.3230998876236	0.185802162091246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.5459422068545
Merged-chr2-125594181-2	4.65074061935131	0	1.37003822761365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134052075-6	9.99378172032019	-1.25602473884171	0.602794360081098	-2.08367035596141	0.0371901624696926	0.484842987745694	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85744556612048	2.29350574780863
Merged-chr10-94005449-2	5.37030973249243	1.2703228940962	1.41470061340502	0.897944683178363	0.369215041154688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr8-119813648-1	2.8205797428014	0	1.45443613447175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95637271-1	1.74602139247133	0	1.47191177488292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80950787-6	28.2333093952539	-0.875189872721125	0.417182536923972	-2.09785835997402	0.035917659322101	0.475048185666689	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91450566169499	4.29844262719395
Merged-chr1-138124228-1	2.59189977628921	0	1.43490893346677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23489526-1	2.96831406947702	0	1.40191333817072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137224480-1	3.23132756875036	0.66035088794426	1.26625336628044	0.521499808434081	0.602018638992059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	2.4197968805191
Merged-chr13-95489411-1	2.71248259537743	2.19642155927917	1.41980856811163	1.54698429676365	0.121867032303216	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr2-90573607-1	3.81692316091241	0	1.37749857148905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5362147-1	4.00620745955989	1.6572227784963	1.12510620367165	1.4729478631334	0.140765094667782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03996640867281	3.26594747095003
Merged-chr10-117807676-2	5.70071625183183	-0.0352149608663889	0.898107541423525	-0.0392101827923327	0.968722815186696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.30064958020929
Merged-chr17-25168082-1	3.11504358415267	1.18664845785306	1.30434935325441	0.909762752511294	0.362947641941238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.73556682010248
Merged-chr8-37886977-2	6.35344464438514	3.06323592986135	1.05832130243079	2.89442905743804	0.00379848732651722	0.101216653226544	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	2.63446450816118
Merged-chr6-96116882-1	2.9136482448151	0	1.41726949397154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113864963-1	1.52047842477619	0	1.53641048102804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119283616-1	3.08898912117941	0	1.4159824590328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117054708-1	1.97945942808437	0	1.47626658403471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141467453-1	2.83419538627923	1.83312529042119	1.42528116575587	1.28614994322824	0.198390736851388	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr12-69215200-1	2.60757484161309	0	1.43348736022684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76642414-2	3.04678834099842	0	1.43368657665034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8347854-2	3.54653734783355	0.815688645480353	1.14016120970533	0.715415187376147	0.474352530722348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.25298535761957
Merged-chr15-35305237-1	1.54840519210933	0	1.56936277761259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78363756-1	1.75259343654755	0	1.53329559326498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98985643-2	3.65265520491104	0	1.46366373888232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64304298-1	1.69915961550263	0	1.50065794051999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146386408-1	2.02830459143382	-0.115196999568825	1.34746338520738	-0.0854917475557935	0.93187045594963	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.67591700901439
Merged-chr17-27825711-1	2.80688234135632	0	1.41249281348832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19304772-1	5.37472741429109	-0.18719626266463	0.913597703781598	-0.204900101970243	0.837650175548165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74371842151223	2.53230941712815
Merged-chr10-75827835-1	1.47753361538538	0	1.74810608358538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101730220-1	1.68161862100525	0	2.16351620641453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34350210-1	2.61276371311428	-4.22091447939112	1.32226535210832	-3.19218413509889	0.00141201286501393	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46894688797797	0.303163067301871
Merged-chr2-103009904-2	8.90958955979992	0.088583685768848	0.69480089314702	0.127495066057872	0.898548578031247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63780431868707	4.01201241823414
Merged-chr15-98877456-1	2.85781989321938	0	1.40025449413018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3471584-1	1.82578752753955	0	1.52967433936682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122501058-5	10.0604013302529	0.00433329971136377	0.492979401162275	0.00879002185719595	0.992986667584725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42866575664238	3.52981866042782
Merged-chr8-108767270-5	9.67569059003946	-0.782232613635562	0.647040967841936	-1.20893830918393	0.226686546929336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66828971316851	2.22185921586889
Merged-chr6-122595854-7	15.0415147011414	1.13682338950857	0.501828530148726	2.26536221280932	0.0234904611805049	0.360100952992404	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04975140380142	4.26105086277765
Merged-chr14-48138017-3	6.5043546907914	-2.88018077150518	0.896594451409431	-3.21235622970629	0.00131651022799961	0.0447555844176554	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64629956476548	0.990331813111976
Merged-chr19-37070080-2	3.91252006724049	0	1.39292707474761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33313834-2	4.03020010100614	0	1.40531619643774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35578386-3	11.7136375939978	0.320565262883488	0.575804197028346	0.55672616583534	0.577714536646398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11770517651893	3.19545698148213
Merged-chr15-59951113-3	4.53460200144478	0	1.37452997275487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16696003-1	6.03350336504818	-0.870085075284603	0.776987060924401	-1.11981925960188	0.26279079028599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75275814396443	1.34503387201423
Merged-chr12-34847476-3	5.9184184351512	0.976441718615129	0.815394269797887	1.1975086835687	0.231108344997271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	2.38740722232159
Merged-chr10-121510051-5	12.9218016681329	0	1.33875375254911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55781813-4	8.03043800622221	1.54073665705017	0.768898786004643	2.00382246024363	0.0450890819826935	0.550538501234779	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	2.50627091725624
Merged-chr6-38736461-4	6.42055413503603	0	1.39455574044825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108640010-3	4.6475313819086	0	1.39509202193717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45309649-3	3.52069049210455	0	1.40219842309112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126117101-1	3.03355723368767	0	1.4107995193056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108611868-6	10.6609822243678	-0.101090804637097	0.670300149474626	-0.150814235557505	0.880122256362801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92435819090246	2.741447098459
Merged-chr19-47314535-1	3.00359069694166	0	1.40461856794465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24738047-1	2.71260662984357	0.658770822215768	1.57291500436969	0.418821627605845	0.675346497452086	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.601513806634888
Merged-chr8-36193646-3	8.72036264644121	-4.02959888066484	1.0725143060196	-3.75715163709079	0.000171858366149834	0.00916785959326678	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98445054292691	0
Merged-chr13-91093361-3	4.17756767306388	0	1.38898344215406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145870408-3	8.97897481221099	-0.529567785538268	0.788887542140613	-0.67128425440882	0.502039463380257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12353481051359	2.15215897907581
Merged-chr19-32278023-3	4.33519038979711	0	1.37630151498738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97174349-6	10.8049274670386	0.00425547738030074	0.607909990292836	0.00700017675026337	0.994414712663594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70654711254048	3.2202974467569
Merged-chr7-92962019-2	4.35270982052036	0	1.3705488546723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65332086-2	6.46465042795224	0.260411843961988	0.883471619334272	0.294759716399512	0.768177441521508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	1.77742275846278
Merged-chr2-18607270-2	2.77143365641726	0	1.51809022327227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3506129-5	7.04120723591449	0.086570633535292	1.10202442497504	0.0785560025470879	0.937385784218224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.765562747387088
Merged-chr7-67242602-1	3.22960156293924	0	1.45590271639312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54760307-3	8.03749257191833	-0.516339166197289	0.559480791393857	-0.922889890305103	0.356064589604696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74711490625425	2.68744785204376
Merged-chr3-103781680-2	3.31303842400764	0	1.40925943321875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164953403-4	10.0747784335811	0.262390465537129	0.601146708527897	0.436483244131332	0.662486153668521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96687887873989	2.87820412059506
Merged-chr9-3015721-2	4.39470706302854	0	1.41596381849024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106443411-3	10.6257677792094	-1.43025330021862	0.610879978425514	-2.34130001101848	0.019216718236948	0.31191447794633	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56364292920187	2.20225658013615
Merged-chrX-18239790-2	3.0005740597324	0	1.39954380288426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-49626772-2	3.2858288301578	0	1.4023138984193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4018746-2	3.53628144416779	0	1.38537002386377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99009331-2	2.92452356275145	0	1.41396170268903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125386857-3	9.15382918180859	-0.0676557103636217	0.725968454916298	-0.0931937330134024	0.925749653053885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	1.41391928460556
Merged-chr3-88609828-4	10.8261413963493	0.124927660745505	0.475392063614139	0.262788696546068	0.792713448277848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75731004104476	4.01328123430399
Merged-chr7-38064653-4	9.80811176260273	-0.0373236785490707	0.781088687227717	-0.0477841750359258	0.961888248640665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64730971531962	1.62787736906723
Merged-chr1-140351838-2	4.34407634430533	0	1.41165626501567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33043007-1	2.77375363666691	0	1.38622282375003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3247557-3	3.79877019449875	0	1.38454421827436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48790429-3	5.0243328041739	0	1.36881111597778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91656888-4	11.7876310168355	-2.73785251153084	0.748145547162212	-3.65951855479963	0.000252689547064388	0.0126365695389817	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88677862237725	1.27743081564928
Merged-chr4-122933385-2	5.51297323037313	-3.86270131016349	1.17468296763089	-3.28829260030373	0.00100797020661042	0.036098320895947	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39487633519123	0
Merged-chr12-100841387-3	5.72196057776862	0	1.37739420688257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63952267-3	4.65091282302383	0	1.37235641386996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86884471-3	4.48530516521718	0	1.38806770327038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167950377-2	3.52633104623431	0	1.45723523680198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45620942-2	6.13187031029705	1.60652244439505	1.090511648177	1.47318228748924	0.140701889804336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	2.36348447703356
Merged-chr14-31781732-4	8.93593969534022	0	1.40150503289657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79797238-3	4.74025919678226	0	1.37257002629973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67892385-3	4.11994296249657	0	1.40774474966177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35552783-2	10.6883652620198	-0.3892538625203	0.539370405527052	-0.721681906407038	0.470490068792245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07452906206666	3.77921235599982
Merged-chr15-78610638-4	14.8769321417086	0.214202592517702	0.479762734486394	0.446476095620504	0.655253376104822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99208859500335	4.38451687622592
Merged-chr15-59787350-3	5.85482942494694	1.94562329253851	1.04715387592197	1.85801087812953	0.0631674695443828	0.688534284532406	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	1.97656658922368
Merged-chr16-21216198-3	3.73868497091495	0	1.37599681690636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177703037-3	5.11853908385363	0	1.38253033609994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53939546-4	4.66930392305774	0	1.36944061889607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76519059-2	4.11901340489413	0	1.4215071704778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3090164-2	3.97273565757628	0	1.45574432278924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34204465-5	8.38025612449757	1.21093135108521	0.746003113032814	1.62322560044323	0.104541187149383	0.93759353114227	C57BL6J_F1_Control-BALBCJ_F1_Control	1.39133106813974	2.88440387029755
Merged-chr9-75426377-2	6.17650055102961	0.0301635131565794	1.32470805886262	0.0227699325559153	0.981833792148454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.600815099743027
Merged-chrX-134910535-2	3.32374691432265	0	1.397289742368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34077754-6	15.3353379170608	0.658868435480472	0.35995923664884	1.83039735725197	0.067190542605699	0.714897378254686	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6618689722009	5.19181614453688
Merged-chr13-18810179-4	4.92704378611901	0	1.36370654059582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63047196-1	2.7571083068219	0	1.41967941061952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65474814-1	3.55424356587686	1.90013591412075	1.12444947682639	1.68983662963998	0.0910592139284979	0.857123430292505	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.23927158812161
Merged-chr1-153996861-1	2.0007335117853	0	1.52272438312214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32369157-1	1.60906823890281	0	1.53399738467281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85010317-1	2.1614747599762	0	1.43901230973852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46333292-1	1.88086393953329	0	1.60145368645578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41995705-1	3.32165240213807	-0.197799177750914	1.0567935565354	-0.187169174648812	0.851527992780845	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65080445539887	2.99233391540273
Merged-chr2-145743462-1	2.26091174312672	0	1.40586032527961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133021446-2	4.27198499501407	0	1.39794549974101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43638291-1	2.34093819719626	0	1.46416426887156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160362848-1	3.75119067925669	0	1.42949047587437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100513642-2	4.92789733731005	0	1.38847039919744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30366163-2	4.67564288830022	1.76624443076035	1.35837520283199	1.30026256889703	0.193510992405043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr17-85393240-1	1.67060566197467	0	1.52748545659845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80242843-1	1.70687859907965	0	1.52561755992653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15340624-1	3.29906023981341	-0.590677897292304	1.35269377221483	-0.436667861880636	0.662352239775101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.577068348605183
Merged-chr10-11492155-3	4.86547505090715	0	1.3710510599312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35119994-1	1.47940409940119	0	1.49206064164109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95749643-1	1.70722092847606	0	1.56249546365403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3184052-1	2.32306493483097	0	1.47547678390798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57696339-1	3.74319962200668	0.924660587076706	0.888488254685835	1.04071222348759	0.298009128442851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38658767833973	3.09104767462563
Merged-chr12-87385275-2	3.50528991828575	0	1.4261773133393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77386456-1	2.51429673356581	0	1.46684597760866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-43493887-1	2.4793671980328	0	1.43132475388533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163634400-1	1.85955986404722	0	1.53507401734617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104835635-1	1.81836676761461	0	1.63209241654523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8753610-1	2.31683698250048	0	1.44859178041691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-119713136-1	3.74012910198754	-3.40665793533434	1.28675721635286	-2.64747529063024	0.00810952859275819	0.174308368831057	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93885859565466	0
Merged-chr15-8642486-1	1.87751446824458	0	1.40965385394332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105239758-1	2.35099117116647	0	1.4315358191821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152620021-3	3.16496481736403	0	1.40222808910755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9129158-1	2.15892602491238	0	1.42628805980297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54921797-1	2.25547500461825	0	1.51241399616052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34387031-2	4.29877897703192	0	1.37942711187786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44757317-1	2.04772153560303	0	1.41028825707726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67715268-3	11.4000924857074	-0.255243216222486	0.607794254116271	-0.419950031600097	0.674521957262118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7966234689808	3.14988229034738
Merged-chr5-125141289-3	4.81279246411204	0	1.39749041891284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13526109-2	4.53721303039443	0	1.41132650911743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43634250-4	9.01553665038953	2.30890527078243	0.843757555375421	2.73645581728166	0.00621049342027153	0.143323371454419	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29835464915396	3.36397907661932
Merged-chr2-116923388-2	3.92398967708432	0	1.40227591433622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170121410-4	9.45693284812259	-1.35450729097517	0.869172139037151	-1.55838783842711	0.119141337801052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00129118555875	0.990331813111976
Merged-chr1-24482838-2	7.09530192821672	2.28748902383615	0.735825401623381	3.10873886493926	0.00187887700768477	0.0593671495303669	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	4.15405716977269
Merged-chr4-116632216-3	5.00371355380227	0	1.38166564838058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46556529-1	7.07404407364338	0.349489395907579	0.529875210022543	0.659569251961627	0.509530291538611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95368943817554	4.36600185510919
Merged-chr2-90395165-4	6.43811524138895	0	1.36787386053651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22073596-2	2.75992807680788	0	1.41339460940585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50352655-2	3.91933698616978	0.499915091890038	1.27892628913279	0.390886555494154	0.695881092114983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.724326877898254
Merged-chr4-145209436-1	4.01492688685666	0	1.37486130711549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134105996-4	5.59878414241052	0	1.40123245139099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55708102-3	6.39929940927149	0	1.37298224758488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5592060-4	5.24357467831074	0	1.35533271052966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32227747-2	6.53273623776745	1.1012962608128	1.25353425118027	0.878552987104957	0.379643695901332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.67591700901439
Merged-chrX-9473481-3	6.45021227178145	0	1.37962491373316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39259366-3	5.22285776998611	0	1.3752450599388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3224639-4	5.32209413207952	-2.46279002231796	1.18356546598161	-2.08082281302066	0.0374501272419205	0.48713842228848	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chr12-110508116-4	4.63888556585048	0	1.38118820552261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43953192-3	5.09254983611627	-1.27814415120355	1.37097107838535	-0.932291112011547	0.351186099759479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr9-14807427-4	5.04719143187502	0	1.38497559933759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68154304-2	3.27357573653316	0	1.43781636764128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40271412-4	6.97205180795712	0	1.37007211626671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6625571-4	6.75976149885504	0	1.38636937788896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24630406-3	5.02244941874419	1.76965377706007	1.28358983314863	1.37867543927107	0.167994845380557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.904676873936758
Merged-chr17-86971122-5	9.85066522832563	-0.125436432787921	0.60488354007861	-0.207372865149578	0.835718672463926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13251872425644	2.7687486486236
Merged-chr19-21295196-2	6.77496758890318	-2.46943119088511	1.05254628323995	-2.34614974201771	0.0189684850882074	0.309456146731652	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31260716574699	0.600815099743027
Merged-chr17-36947161-2	9.1265090085386	-1.1432246203864	0.656220248642323	-1.74213554481389	0.08148472918658	0.802432680045889	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34952400080693	1.82718274911235
Merged-chr5-121812961-4	6.90813150334992	0	1.379418114984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36223229-1	2.11797330077258	1.62449613396117	1.47078226083856	1.10451164473181	0.269371255028245	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr14-17916716-1	3.87710714129138	0	1.42534349816418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102750105-2	3.20940805309496	0	1.42534944344464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128727670-2	5.65263956965126	-1.56687597509703	0.790212988875843	-1.98285272091778	0.0473838830599005	0.569098652066534	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26259621433327	1.15686374297165
Merged-chr5-66082362-2	4.43019629251371	0	1.46672051810763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122032190-1	1.72261341481876	0	1.64514277790426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83081380-2	10.9191406286525	-0.143570493314895	0.444772765595758	-0.322795153886249	0.746850383354829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37294890313088	4.31420868960366
Merged-chr14-25377628-2	4.38459439390638	0	1.37155868925378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48592662-2	3.52416268916447	0	1.40807118555456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40750393-1	5.51132613111503	0.402179668808447	0.690471857319193	0.582470761907572	0.560249630052922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37441905672497	3.18347492960484
Merged-chr10-44511219-1	2.65142547305633	0	1.41383984575508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3767129-6	9.50872514786128	1.96980229287372	0.890016548793968	2.21321985028586	0.0268824922070363	0.39441441130426	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	2.27659170072453
Merged-chr16-91081683-2	2.81845954317347	0	1.41961483930276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110871154-1	5.21421965328114	-1.38854500578256	0.776447775875948	-1.78833019930552	0.0737227503685314	0.756586153842261	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04144112810011	1.69378000693571
Merged-chr17-35036816-1	2.29822409605664	-2.88867199651224	1.26485886857663	-2.28378996920258	0.0223838774701121	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0
Merged-chr3-149445460-2	3.94898694451685	0	1.41448536697481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102817668-1	4.55470831224645	-0.0439053666384457	0.904607057705275	-0.0485352908364665	0.961289639551723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76891977860032	1.20027794713453
Merged-chr14-45627929-3	8.42732147026409	-1.68441512763487	0.9680351342802	-1.74003511648092	0.0818528519679208	0.804891313336506	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19127296633573	0.724326877898254
Merged-chr4-124234611-2	9.91620901866701	0.493346755651983	0.548261289786725	0.899838753605777	0.368206067494143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29703037099497	4.01015921639696
Merged-chr12-16882704-6	18.832046578333	0.0532694015260609	0.363400996844242	0.146585733084526	0.883459015378226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63591046898128	4.55206827474536
Merged-chr2-160451643-3	4.86484555944278	0	1.38194597254841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107047749-2	8.16802550717203	-0.43282852357374	0.75235428327268	-0.575298809612634	0.565089226453367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7290780163363	2.33974299973187
Merged-chr6-15728506-2	4.87279732662977	0	1.38527182678884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74811045-4	5.814418738598	0	1.35260869570763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181918762-3	7.31135048328776	0	1.39960392769075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46311348-4	4.69476424388121	0	1.377302255927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11628194-4	3.6370276895222	0	1.38295625214433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164526033-2	4.52591059110696	-0.853549181426962	1.09092073330767	-0.782411732921239	0.433972640663851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.859510663435501
Merged-chr7-44358539-2	4.16290743944633	0	1.3977324609574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98787100-1	2.03182650678776	0	1.49043355060637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60451810-3	4.36650838222375	0	1.38361024803928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63429931-1	3.83945327199847	0	1.4168933344684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37693591-1	2.89813869800739	0	1.41528768505913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128782037-2	9.11166923573513	-0.976930554814091	0.634487006654138	-1.53971719604752	0.123629303334465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0769298152659	2.4367442722902
Merged-chr3-136171794-2	4.9552154422962	1.21384077050034	1.36723720128381	0.887805546367937	0.3746453589651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr2-156352324-2	3.36859315326905	0.623195995363708	1.38251341786014	0.450770305237465	0.652155105271443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.600815099743027
Merged-chr1-34386690-4	4.0039862249786	0	1.38302775293198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47906273-1	2.32645150556984	0	1.41201078589219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75792095-1	3.48673468406356	0	1.39580329026027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114144162-1	2.02223979735364	0	1.54887301524768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126483192-1	3.64221863120131	0	1.37010992573104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34220998-1	4.44231824718133	0.300014496960325	0.855220472396972	0.350803689391881	0.725735629164174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12232218127513	2.25412887041918
Merged-chr11-46431386-3	4.84202718652608	0	1.36950474006222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103479655-3	4.45774072067645	0	1.40106481655209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97617320-3	5.19852370759463	0	1.37078118056095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12223972-4	19.753099417935	0.245433309070811	0.413982577410924	0.592859029492904	0.553275498987929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17990075531964	4.26275341215458
Merged-chr11-110542118-6	14.5014520899449	-0.356860547936544	0.448679525588333	-0.795357326520772	0.426405675551234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39276508427532	4.066981366901
Merged-chr14-57718454-2	2.60604221209887	0	1.44055236826617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59818487-4	5.26768211607839	0	1.36461250206267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113594588-3	4.18809891578392	0	1.39322987435889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136118669-7	14.4852849860854	-0.119967220723551	0.521096166744081	-0.230220885087549	0.817920133736115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18995503948152	4.11170006736433
Merged-chr7-75794466-2	4.38845151976351	0	1.37098103242416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102346634-3	13.3442983931507	0.323888777840509	0.506126876288813	0.639935939018752	0.52221424785467	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08030142795828	4.46423221189801
Merged-chr17-5187672-4	4.82872069634569	0	1.35882209987424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121315982-3	15.7783712886236	-0.253286099413068	0.411891890693507	-0.614933445246051	0.538598674335879	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.398014779295	3.38745950376169
Merged-chr4-86904210-3	9.70053462768599	-0.991759910485979	0.650571146339529	-1.52444496818859	0.127397594118319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72197601438842	2.53598287467403
Merged-chr4-136266945-1	4.00335052493529	0.741604871080467	1.01580444263711	0.730066575762557	0.465349490834935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	2.56962857856503
Merged-chr12-103494677-1	2.02793826681816	0	1.46678656655178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55327752-1	1.70328010750331	0	1.50088516440015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40812061-1	3.19756577675466	0.545390088731411	1.10282711046943	0.494538158840926	0.620926164215054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90896656829731	2.19583687562848
Merged-chr8-119807956-2	3.77359397095227	0	1.41333940030413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104576323-1	2.82317776096835	-0.0786364494502765	0.98871165775713	-0.0795342593903074	0.936607682858745	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71664175267955	1.58059388295115
Merged-chr12-113125282-1	6.68944692249347	0	1.36475308852775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70403198-2	3.06165336083055	0	1.4675744492844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90256065-3	4.24055936987526	0	1.37545899289209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150112650-1	4.6410979968488	-0.586482342450297	1.07815182064582	-0.543970089573273	0.586462055650744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48334162937131	2.66306269859855
Merged-chr5-77217471-1	2.70825564236803	0	1.4293282944364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-162999958-2	2.47646379703328	0	1.42720771631884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104194915-1	2.54192546162855	0.886108139053856	1.2765101703689	0.694164574339254	0.487579006127677	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.27992882773773
Merged-chr4-139337260-2	2.66534742861218	0	1.42181642978083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-72218136-1	5.87011019765536	4.35919648199144	1.14550216321292	3.80548952414433	0.000141524004627167	0.00781819447919532	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.72414819647793
Merged-chr1-136394698-1	2.62249393633271	0	1.55599666262383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11050020-1	1.79154411356285	0	1.65645313665231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70879015-1	1.86049701918445	0	1.58764548751159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71194926-1	2.16379666764291	0	1.45091405234647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84985586-1	1.64669160562422	0	1.51650111710853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6425522-1	2.32946941684269	0	1.41423473957445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105018262-1	2.23647115329662	0	1.41546319318425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9332730-1	3.16458802374428	-0.607460014618976	1.25144084607864	-0.48540849255675	0.627386609342472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14051560518906	1.86501351763573
Merged-chr13-21170298-1	3.54411358379767	-0.0355360762246338	1.41835926722011	-0.0250543547364287	0.980011608384633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.41385117919798
Merged-chr17-63393008-3	3.88508339905208	0	1.42338533110302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142699108-1	2.35153090300673	0	1.4059383928656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177667560-1	2.06506469072161	0	1.46508762743764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-28845254-1	2.60376013501134	-1.7122762332508	1.22082211695282	-1.4025599712468	0.160748095373807	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6779497862902	1.76197067039868
Merged-chr12-84163148-1	3.45145055284367	0	1.42191112348623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64725402-1	2.20239595719549	-0.0349717761846942	1.51334021446392	-0.0231089981290707	0.981563328134852	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.41385117919798
Merged-chr6-108405400-1	1.26969705385019	0	1.60002418525779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115285476-1	2.50752750475905	0	1.40518981862964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67297473-6	10.4886947620451	0	1.360176406906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101617081-2	4.75020789244292	-0.795265846784471	1.12773213378211	-0.705190375410662	0.480691770044249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.577068348605183
Merged-chr5-147913922-1	2.92676222889538	0	1.40667140653581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174204433-1	4.36898240321356	-0.750753325715733	1.1197471724555	-0.67046681981737	0.50256025110885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	0.879366456215217
Merged-chr6-4588153-1	2.02198155535933	0	1.47756948430356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134771365-1	0.746202005022215	0	2.05346222654078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174354832-2	3.5449339915835	0.622060468978804	1.3916736816187	0.446987305425843	0.654884225716878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr16-45145346-3	5.73410882493159	2.16678009164943	1.21983651533577	1.7762872847375	0.0756855779140519	0.767859710681215	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chrX-12873405-3	3.8839438793808	0	1.38271347233465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36824261-4	11.3409865067819	0.546684830124012	0.494825702826045	1.10480281642968	0.269245039880848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19704867772103	3.74763766530097
Merged-chr7-16192489-5	11.9856626769428	0.263694578411391	0.52959922135965	0.497913455639913	0.618545042883205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85848966173274	4.04354129471986
Merged-chr14-64753090-3	5.09404161284449	0	1.36763870172861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-17604499-2	3.79234049079637	0	1.39985075258507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63412279-4	4.718471798972	0	1.44725046587847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26491377-4	4.65179434352159	0	1.36043885389773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79846315-3	7.1256115140515	1.68493877983072	0.899948747492178	1.87226081988115	0.0611705284225062	0.674887102601789	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26927213904674	2.92649600976758
Merged-chr12-24786542-3	11.5299887935565	-1.19100627368393	0.652634169930096	-1.82492172270339	0.0680128426298023	0.720263026010797	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17727526033188	2.35031680267015
Merged-chr4-25273419-3	4.83315154047263	0	1.38212704338125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110386490-3	3.786887282774	0	1.3853677315319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78792752-4	4.71394317958732	0	1.36364422909193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29895129-3	4.07209871847201	0	1.40855355324535	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27795456-1	4.95261835984145	1.28341794031404	1.11371788509823	1.15237256893009	0.249168008109379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.4068548238317
Merged-chr14-118664467-4	4.30004620282323	0	1.3911231595587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7776898-1	3.06136449064858	0	1.38784808682445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59236590-2	4.03629515490004	0	1.3760931315012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79786419-3	5.6019224685083	0	1.36887115626803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70993653-4	10.4579696083076	1.48582336001242	0.707981564107802	2.09867521322374	0.0358455411216477	0.474788191018737	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57074540165941	3.72582335488147
Merged-chr9-116086537-1	3.2444637273986	0.313599228272191	1.39175824967577	0.225325934547361	0.821725725528706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.577068348605183
Merged-chr9-95659550-2	3.30062261414442	0	1.43000652493791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153342786-2	3.6422921753116	0	1.41397213206831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60710832-2	3.82159692027225	0	1.38438890647108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116635588-2	3.71767768984502	0	1.45651158316304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127949067-3	10.4560684452633	0.53734124659406	0.543754733572343	0.98820518409808	0.323052169785639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65197290288771	3.00434199664006
Merged-chr6-127143336-4	5.4679461241221	0	1.36909886279877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76583084-1	2.42371917447133	0	1.40110853780696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137945635-4	8.55584530789147	0.577476231974053	0.590951807424993	0.97719682843571	0.328471717857558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41701300570638	4.13665391028356
Merged-chr8-119359052-2	3.51931798337763	0	1.37408596026291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127982194-2	3.31157912516647	0	1.4220841040021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107156257-1	7.9241832465989	-0.802896639397293	0.752340442632886	-1.06719856317637	0.285882181249965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59790867484798	0.988408630094828
Merged-chr11-20559710-2	1.95915427891762	0	1.4650000057247	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41583783-2	5.45670518228713	0	1.35530951591182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95614176-4	6.98492753396018	0	1.36661961221637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28478799-1	1.79591505393239	0	1.43769967716352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6277962-4	5.37404736228492	0	1.37174203292486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52318615-3	10.0858108312811	-1.62460416220028	0.718885335788392	-2.25989331166228	0.023827873125947	0.363373754192784	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63443903304079	1.56163052678955
Merged-chr9-100529070-2	4.52941406832131	0	1.41246249810563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24402624-1	2.31669768589358	0	1.49692297530006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170796650-2	2.80118702078598	0	1.51146514874533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116885400-3	4.08880308973614	0	1.38535584359513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117466144-4	6.65643245164146	0	1.37504642767523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49269406-3	4.1664300078494	0	1.36183587029198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-30605472-4	19.5179666812062	0.639575313431483	0.457877933379235	1.39682493260001	0.162466222764053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27529717501991	5.01125158937511
Merged-chr3-83002353-3	8.69592416036006	-1.88765491829673	0.702954487836457	-2.68531597843059	0.00724612652795252	0.160272452825075	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59010173332673	1.51226750748471
Merged-chr3-122169803-1	3.20747470418721	0	1.38197923526538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73436667-3	8.12000002330625	1.78738658108159	0.747249925155496	2.39195284055686	0.0167589956034267	0.286568808432423	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	3.79771467200933
Merged-chrUn_GL456387-15421-1	2.30666725337426	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73371276-1	2.83107643016924	0	1.41129625876609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160081214-3	11.148584569508	-0.566605696611274	0.614796301102022	-0.921615331119647	0.35672925872885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52273741510898	3.98606331377949
Merged-chr7-71873103-1	6.3143063588881	-1.77270096679588	0.918783896939694	-1.92939925558168	0.0536813160643251	0.619446960416844	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87868501363016	2.12382511851675
Merged-chr5-113965190-2	8.16690685067398	2.18136075573594	1.1517186513143	1.89400488847397	0.0582243610067977	0.65379426564109	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.33175291456033
Merged-chr1-78844949-1	4.32372052790039	1.06176098821026	0.914210513529499	1.16139660668647	0.245480648313525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	2.41420516037489
Merged-chr1-93486729-2	4.33833458141931	0.435502350784263	0.77793784581006	0.559816382671006	0.57560468797026	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03247245696714	2.75363610327158
Merged-chr3-87804184-1	3.14165066421772	0	1.41675044525339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29814155-4	4.40938639133932	0	1.36488830236872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106812236-6	11.5818009758418	-0.673921209816025	0.633337953707063	-1.06407835796263	0.287293204021509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4278892541452	2.46040422825103
Merged-chr14-8108304-1	3.43001988799422	0	1.3791610564861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167260588-4	6.36435069844507	0	1.37551274325604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22790574-4	6.52089535634195	0	1.36362071774491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128728583-3	8.00629194037928	1.0034859299717	0.787824250654053	1.27374338773985	0.202754374396455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12695852494485	2.66542099063097
Merged-chr14-71002483-1	4.79406182265883	-0.280913668031321	0.876898207394021	-0.320349232855822	0.748703605524941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67175145105019	1.83189312414735
Merged-chr7-145309089-4	5.73729324163266	0	1.36894096923159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89281685-2	4.39358847053806	0	1.4001834920037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191241767-3	4.39849568122079	0	1.40251078373698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67637869-5	13.6959754076953	-0.0156276147946914	0.817836892432704	-0.0191084737547191	0.984754571586372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	1.74224738577465
Merged-chr9-88406032-2	4.15441976708184	0	1.39377460813083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49381201-4	4.54596747942259	0	1.38004662669043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15715401-8	12.6736031015888	0.704022004535829	0.610685992669128	1.15283797727005	0.248976893296269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79777589789032	4.43885555500353
Merged-chr8-109862759-4	5.34672784242339	0	1.36075326700185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17895606-8	18.0764643300397	-0.0603653098060467	0.349655199275178	-0.172642391507924	0.862932528570412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73577780941521	4.75771676526433
Merged-chr8-122405306-4	6.24210746629159	0	1.3798550479692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50649722-1	5.38971365931175	0	1.36923215108892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54236358-1	1.85216734013227	0	1.480980306704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150586448-1	2.7855003470449	0	1.45767612243264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101529415-1	1.67601243079023	0	1.45215716745059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-7857052-1	2.95992356190751	0	1.39502039851769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92416694-1	2.44951400918723	0	1.41461429970999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135324316-1	3.95991838901561	2.2038463900863	1.16891701532027	1.88537454857945	0.0593792877306886	0.661841029680644	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.90178265037054
Merged-chr3-52468488-4	6.71173207607438	0	1.36516402005918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99243255-1	5.82082117634724	0	1.35316889870481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55209828-1	2.69415576595087	0	1.46122535047349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107324332-2	2.78561279497502	0	1.41566323656034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136546153-1	3.24099281048986	0.983791798845536	1.34126104651951	0.733482718668686	0.463264064182603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.79061031525623
Merged-chr15-41613149-1	2.52163381962386	0	1.45514485060514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43103219-1	3.60050893740193	-1.37971151200251	1.0981330114378	-1.25641565969867	0.208965306944452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37073167707971	1.26296211256663
Merged-chr1-54835966-1	6.09587983485324	-0.0126682466165865	0.768286621931058	-0.0164889590095235	0.986844310326092	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30081306793583	1.6630069827152
Merged-chr12-76373372-1	3.34085933967145	0	1.40224952460108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116606880-2	3.34001584600745	0	1.37564063607584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35563614-1	2.68394469137127	0	1.43348615227752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132103624-1	3.67223614056058	0	1.41342338140037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115172975-4	5.1028121450799	0.655770861696087	1.07065725282214	0.61249373687755	0.540211140551455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.19201838126386
Merged-chr15-9710533-1	2.39651196381267	0	1.45080483667445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5897935-1	1.50868752770538	0	1.44532937266816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13232767-1	2.73719118579746	0	1.43156012254774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-117979346-1	2.15422494147239	0	1.47292906984467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57150421-1	5.5887284322642	0.126468350877664	0.870048444868118	0.145357826479231	0.884428360544414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98383943966669	3.01995546491878
Merged-chr1-54829401-2	4.07655916530201	0	1.40874576551642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9329802-1	2.4892203994268	0.268969623987453	1.36605270901507	0.19689549474367	0.843909319343878	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20192767614962	2.41894820090875
Merged-chr17-86744848-2	5.27763160598615	-3.3773388658266	1.02898305829288	-3.28221037130554	0.00102996732799878	0.0366932099415142	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69073738957719	0.67591700901439
Merged-chr2-24104101-4	5.73510740303342	0	1.36169178211621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12210525-1	4.21091447677599	-1.1739889644884	1.13103248526742	-1.03797988102067	0.299279421785069	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	0.67591700901439
Merged-chr4-118296019-1	2.13636648503854	0	1.46658812115342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31001216-1	4.14373392896089	1.90125878191761	1.19131637211649	1.59593104436217	0.110504189513757	0.967638163788419	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.61220381723996
Merged-chr3-149173736-2	2.25307026455832	0	1.53289263036912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47232846-1	8.26619398099056	0.782422552282555	0.569025824399543	1.37502116553005	0.16912488296463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79786095570111	4.57488761477498
Merged-chr1-157560849-1	2.60283583673637	0	1.41736239505803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95265046-1	2.80000517902988	0	1.43432919301609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52108150-1	2.01015512525403	0	1.54005508247744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32503766-1	1.94820848792036	0	1.49673983165649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42003762-2	4.32189526904193	0	1.37538430857456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116603940-2	4.38346888526217	0	1.37176227581073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109108226-3	15.5737506623038	-3.5644529884243	0.675880656292356	-5.27379050611929	1.3363444669536e-07	2.20797413006476e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.9884646136777	1.44790810950236
Merged-chr12-26426466-4	10.0302884240457	-2.95869738456747	0.685360430594622	-4.31699475559231	1.58167914857262e-05	0.00128710324606675	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63863406205219	1.16492870185157
Merged-chr1-66859679-2	3.19229985282927	0	1.39214690718849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156861863-2	7.14279600179987	0.542595487676789	0.783848024546394	0.692220265517393	0.488799013927972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05801908341688	2.74332790740356
Merged-chr15-8665445-2	3.011956514803	0	1.39875090539642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106364446-2	3.41697832555376	0	1.48669531968717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44819590-2	3.41671833228875	0	1.38785503326619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46087258-2	2.96503964062997	0	1.44217665785122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10819251-3	3.57834124171387	0	1.38931151411227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122357314-4	5.33213192450118	0	1.35687797384395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-18795071-3	5.80467795850103	0	1.38166816396205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-130314296-3	6.40008032814598	0	1.3794826821233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54600680-1	4.14230804325049	-0.63339020278307	1.39619526641773	-0.453654455087921	0.650077552745725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.577068348605183
Merged-chr5-41887955-4	9.97370934315154	-0.0802558963446808	0.575690749573777	-0.139408000569923	0.88912775055541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93720872347487	3.71399971580103
Merged-chr5-79812248-2	3.61498544027282	1.28275312268825	1.41836854024248	0.904386332813725	0.365790582685746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chrX-9520188-1	2.77348952377303	0	1.38088668913107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36923252-2	3.93591461041903	0	1.41260313144658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-25713366-1	2.45520544345091	0	1.37952312217061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115623116-4	8.52533736849075	-0.700876768969313	0.603648063331767	-1.16106852907123	0.245614031798201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94217219817846	2.41307516068939
Merged-chr7-24364996-3	5.10584425564444	0	1.36580459523214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9602342-3	3.59997683390455	0	1.42287575890907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167268727-1	2.00329259254323	0	1.44883852472941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23383104-1	2.55179588326298	0	1.38832604452718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45142760-3	3.87015646591037	0	1.38412517866515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44305336-4	4.84412939116462	0	1.37961581583807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35565235-6	16.9340746737786	-0.529345216159627	0.434217821735688	-1.21907759115849	0.222814744239663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7532922914035	4.32630780470424
Merged-chr11-46733591-3	8.6145407504907	0.0258411183578754	0.706934321228827	0.0365537753393513	0.970840800811367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47362192078634	2.09378551383512
Merged-chr5-137095374-3	4.43670270819785	0	1.38030377231009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112543104-3	5.01132583446381	0	1.35910662551512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130669272-2	4.4992946925207	0	1.39436974466061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100438809-2	4.92761848259013	0	1.37022590522958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22351383-3	3.62004228012163	0	1.37814921127565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65794920-3	6.77944347976141	2.48866532067842	1.21373054163343	2.0504265447001	0.0403228250518411	0.509864723655043	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.32514197764128
Merged-chr4-122853295-2	4.47572506193301	0	1.37658607152507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116142392-4	7.13032525249843	0	1.3634777700722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101374150-4	18.8181605391581	-0.127599117706485	0.518452562262913	-0.246115318920496	0.805592964957644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74359812531087	5.12180751007947
Merged-chr3-84356114-2	2.903688904485	0	1.49734984808879	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35843395-1	2.29723985589784	0.905769681682393	1.58355614120094	0.571984572012377	0.567332426767542	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.577068348605183
Merged-chr19-60942029-1	2.98907369527989	0.0362459849462931	1.05605244623599	0.0343221447717696	0.972620266296764	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.40298672487694
Merged-chr9-121671535-3	3.95011432301155	-1.30508929324253	1.34397218890436	-0.97106867539162	0.331514081310417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr6-4955369-2	3.14601872154837	0	1.41708338161763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45395202-2	9.34325641912185	-0.0972359554285138	0.591235197883528	-0.164462392930248	0.86936714968733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75941768832487	3.69020054655681
Merged-chr9-32034219-1	1.85291310330158	0	1.47075595332427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111028544-1	3.45511753264201	0	1.38703226395333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54881135-2	2.53342891701818	0	1.46236278580472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79830555-2	7.139473041574	-0.148349080630947	0.676739622998528	-0.219211459754101	0.826485328983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23597386328136	2.61238044918993
Merged-chr15-100673582-1	5.09731172447017	-0.528290777932567	0.841703778940912	-0.627644536177915	0.530236826606783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66736997595706	2.82337302250378
Merged-chr8-122263544-2	7.58893215942644	-2.04956104573939	0.86132033345645	-2.37955725196289	0.0173334501890362	0.292526860858683	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69100147567081	0.662147012823607
Merged-chr9-24376799-2	2.59542939492621	0	1.47183815341822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75458203-1	4.34871416751226	0	1.38849136461217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91623218-4	6.35371939068391	0	1.37595645926799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83610136-3	5.48478604422265	0	1.37779976025949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-171630319-3	6.23382841549785	-2.82095680729577	0.803738774310132	-3.50979310375695	0.000448455492509673	0.0198735017495875	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95523920815546	1.18984215491549
Merged-chr6-136471056-3	10.0270759503306	-2.00177661571101	0.663174668103176	-3.01847569274099	0.0025404978104119	0.0747288530715263	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32391171993079	1.6454950719498
Merged-chr15-68428569-4	7.75407104247723	1.63026406588641	0.793291320511525	2.05506353559395	0.0398728683557466	0.506608656553668	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	2.46986466577858
Merged-chr4-32229497-1	2.86978764925388	0	1.41074988750146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133744808-3	8.62964954969256	-1.24156797236625	0.470410956449891	-2.63932622177031	0.00830710006134077	0.177641877354218	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46600000398214	3.33644105260716
Merged-chrX-133610658-3	5.37754556015891	0	1.36625976409899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115380961-3	5.28959492468511	0	1.37990747378747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16043003-4	5.189649284018	0	1.36589716346689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113442451-3	3.39851657735868	0	1.46649157009493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84533369-1	3.53397975268563	0	1.39932237246692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55249411-3	3.39074823875331	0	1.40145127602954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35972372-3	5.50011538918947	0	1.38817778443755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119817710-4	6.11441245658274	0	1.37728543786628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43363156-2	3.28496452255272	0	1.390122391811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177141630-4	5.70527834517842	0	1.36941206168709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66856737-4	3.80275175158836	0	1.40089984181788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79375672-2	3.82180747952144	0	1.40077119699317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106651018-2	5.29741838180177	1.37879843446664	1.07342640744878	1.2844834307213	0.198972857445438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.82011828833849
Merged-chr13-118538936-2	3.39374729079739	1.21621788514079	1.38615235257987	0.877405635013497	0.38026635354353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr9-55309764-3	6.54431585614627	0	1.38121958998671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90613176-3	4.02652589110063	0	1.37905631259793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-22402239-5	9.39216993028781	1.65615266293782	0.702818122559427	2.35644558638681	0.0184507705892693	0.304113231795661	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3022060396979	3.41185607939874
Merged-chr10-37156476-2	4.40183689921821	0	1.37164161462036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47386291-4	4.00978372271589	0	1.36814077054064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88352885-4	7.37479867585624	0	1.36048702848364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136742949-4	8.16616113735611	-0.462836499278665	0.562888232512489	-0.822252931479423	0.410932959099225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10801804840388	2.92649600976758
Merged-chr18-53088489-3	4.44154389791724	0	1.39972563051731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16619119-3	4.00706563169276	0	1.4094551960794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83695677-3	10.85202051029	0.265586196319159	0.619524733235041	0.428693451724386	0.668146326705289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45948392692984	3.75558836139339
Merged-chr16-93915657-3	7.59240971390702	-0.45858229141227	0.831442116437541	-0.551550471579604	0.581256377905645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60139579763857	1.58383754133375
Merged-chr15-38693360-2	3.30103691795326	0	1.47581150184549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3212937-1	2.46378718496192	0	1.41231178375547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122394122-1	1.28660683448178	0	1.54767023870755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115054705-2	3.19625378332523	0	1.46719442137026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54826074-1	2.80933362695126	0	1.49203727213536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101255238-2	4.68516775181508	0	1.40002204579231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91260147-1	2.62987459757836	0	1.40732743877346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145122315-1	1.5297227242458	0	1.85923317863024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144699236-3	4.01064410151274	0	1.38053733766061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73621286-1	6.36207135851661	0	1.38399394305009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71166719-1	1.48313433703459	0	1.64861486181598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34514278-1	2.71317255189729	0	1.4087476547935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-152147586-1	2.28000654889904	0	1.42458851638689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135763896-1	2.9341840984097	0	1.39637089983332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115859025-2	7.98588237740504	-0.643748106309617	0.624997377382855	-1.03000129217386	0.303009398995108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29307294885726	3.54191026640738
Merged-chr18-80586782-1	3.1419725621837	-1.02232295696998	1.27016900972851	-0.804871595149759	0.420893781303281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.465515277017237
Merged-chr3-126583002-1	4.32179977818484	-1.89381670728014	1.19099594471995	-1.59011180153552	0.11180960627207	0.974184152740784	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	0.303163067301871
Merged-chr6-116077888-1	1.46194215540752	0	1.46132280102622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78761342-2	3.32533099739478	1.38820866128346	1.40115008008693	0.990763716901287	0.321800970057905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.953310774576147
Merged-chrX-49281340-1	2.06559264716371	-0.684428984366107	1.47248794424479	-0.464811265206749	0.642066619781362	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr12-79135083-1	4.09812573964564	0	1.38361517066166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118517997-2	3.24782831799519	0	1.3964626233575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125166020-1	6.48663617070687	-0.672881897209691	0.78892679892896	-0.852907897314668	0.393710381879341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18104020927589	2.58837482569552
Merged-chr7-75610836-4	11.1738283108924	-0.741727034180072	0.534045933965961	-1.38888246685415	0.164868492894952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98011498979181	3.32132944995256
Merged-chr9-56266384-1	1.69846567453641	0	1.45856177583001	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102496372-4	4.52565846376961	0	1.38977558752647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60747894-1	6.49483953159389	0.500932955627676	0.818100671787176	0.612312118670391	0.540331273218926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69175162681871	3.96325601526741
Merged-chr6-4811450-1	5.55963632490884	0.784909000655714	0.916673256267639	0.856258209006314	0.391854971672007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	1.62069611143677
Merged-chr16-18406489-1	3.13566546657127	0	1.40616153167063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-117761287-1	4.23089632433745	0.589009992616289	0.928032786126894	0.634686620366612	0.52563282156244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	2.23369880798954
Merged-chr1-180901271-2	3.09718222316329	0	1.40359240141402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87612675-1	3.50287894190498	0	1.39434314994686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85771596-1	3.48624067294481	0	1.4260462444218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51099443-1	2.38617500165506	0	1.46687181901137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61294793-1	3.71511855717443	0	1.38006013738717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81044598-3	5.12656187896123	0	1.36547509597187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126863928-1	2.1434144819237	0	1.47326235859865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8081345-2	4.32606568882199	0	1.38440337979647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10418045-1	1.44373783233349	0	1.59410632388713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35751252-1	2.86556404727651	0	1.43442231092225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99649503-2	5.08020832192541	0	1.37260324048771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86657788-1	4.02769342856372	0.399256658297553	0.929378418756979	0.429595362060966	0.667490011434822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.38647389072186
Merged-chr6-97444347-2	4.15653906894859	0	1.39773094164813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25660205-2	3.56196939644235	0	1.38302294356586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137844857-4	12.7813549858404	-0.0803774059468713	0.405536119255277	-0.198200362755544	0.842888303678297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17087317848805	4.08208969402324
Merged-chr6-97815946-3	6.16380218979444	3.2173629800769	0.994396084097765	3.23549441870145	0.00121432259449428	0.0418575535282907	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	3.32174793757045
Merged-chr6-37316986-3	3.84259860357494	0	1.47361600328346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150495691-2	5.14641728312091	0	1.38708674107666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79512082-2	4.84310965197619	0	1.41909096487197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134616430-2	3.49236717637581	0	1.39647837636527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71755221-2	4.68580232056737	2.85763077806661	0.936800289727053	3.05041619799158	0.00228524444340434	0.0691283264880449	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	4.05517787238886
Merged-chr5-36596392-4	8.1480589889844	-3.08171064626771	1.12264603322894	-2.74504211929039	0.00605031319017758	0.141214673552968	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0
Merged-chr3-40739154-3	4.22356389048115	0	1.40783958219275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95137944-2	3.89715487170942	0	1.38901092661872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99947286-2	4.35564279628744	0	1.41902570549202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30862083-2	4.21992094696975	0	1.37257353136912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-18625669-2	4.72259788812543	0	1.37535029423348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58686337-2	4.35628761731057	0	1.39025074246276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99396805-5	25.0027256750735	0.183564426550725	0.319789558666645	0.574016322847103	0.56595675567832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86345400746627	5.02818016896077
Merged-chr15-12312039-3	6.69800011955561	0	1.35912325091695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-129874114-3	4.21056542571298	0	1.39823284072806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51491986-3	4.05304501767011	0	1.4055585260151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123620252-4	4.49710136583825	0	1.38836765002142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65853886-3	5.31484885750223	0	1.37751219508137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127135361-3	9.66803713691919	-1.29492871434886	0.561202985995353	-2.30741593801781	0.021031643566328	0.331400894478479	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96401257999104	2.85807867924333
Merged-chr4-150367039-2	3.42697280971479	0	1.39497691656845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57622037-6	17.8022268981854	-1.54437115947144	0.417812645611925	-3.69632459833657	0.000218743263903369	0.0111859502187425	C57BL6J_F1_Control-BALBCJ_F1_Control	4.886816368658	2.70528928224883
Merged-chr4-139205982-4	5.621636115049	-1.20452094960437	1.25081336439624	-0.962990150161837	0.335552466325116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.376242425970964
Merged-chr3-96274785-3	6.87236776019959	-0.71752290833222	0.968589372196743	-0.740791638777629	0.458819785606185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5713323725813	1.32509503823899
Merged-chr4-16080437-4	4.71385545728386	0	1.37827044176769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21836863-2	3.82864887923399	0	1.37866763053218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88575992-3	4.21853399455357	0	1.37969557501714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54766427-3	7.26474521434607	-2.66066985199679	1.11484923002833	-2.38657370013089	0.0170061983175308	0.289249040783059	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	0.303163067301871
Merged-chr4-43419131-4	8.07151597009771	0	1.3542785043753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76393352-3	9.90163792557425	0.569338702196613	0.671600039534588	0.847734765756058	0.396585700169048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15878683838566	3.11636558568512
Merged-chr14-27444001-3	4.52923754811838	0	1.38333074425066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88306518-2	3.22958630969672	0	1.43324058213084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128854256-2	5.63966254741617	2.44410737848831	1.11160762445487	2.19871411883028	0.0278982563906397	0.403974778673091	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.79408446835346
Merged-chr6-99218031-2	1.69118959130408	0	1.67296197367213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16959084-2	5.11614970328228	-0.526071271848045	0.931785417352238	-0.564584143571306	0.57235665292057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78071108037796	2.24384360991524
Merged-chr2-77343394-1	2.26977329850594	0	1.48038889816804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53420005-2	3.99474488470912	0	1.36819426480773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116811422-3	5.52800616087322	0	1.35240016663901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88966274-2	3.59139685335521	0	1.42217772159408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118950340-2	2.62144335650484	0	1.41931915364945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108121328-2	2.86779190308099	0	1.53748309334204	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33996384-2	9.56849674059833	0.735631660870677	0.617121336714392	1.19203731439144	0.23324661440258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11726193679587	4.84595687863809
Merged-chr5-125363495-1	2.8496465196448	0	1.42283250816324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50920116-3	4.5901464922727	0	1.40444093472097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-68605786-6	16.8949414523021	0.615860317751034	0.408996807887447	1.50578270019289	0.132122965766992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03646942782367	4.67862802879992
Merged-chr3-151446185-2	7.00245777104535	-0.773135771930196	0.931216217435879	-0.830243027831968	0.406401392260612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	1.30139522650344
Merged-chr10-125371629-3	4.08946661936142	0	1.39822746850835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37735947-3	4.12147466685492	0	1.43790681695592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82200419-2	7.82581536567545	0.557931382627863	0.823105578056543	0.677836959804367	0.497875073956681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57995335165535	2.51662567685335
Merged-chr14-31410382-4	5.55774078769524	0	1.37034230949786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55612374-3	5.70698137150807	0	1.38770078905052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94245579-2	4.63987315093259	0	1.37957495866525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24964516-2	3.88888853214476	0	1.43291891712892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95833792-2	4.11427569665867	0	1.39569004822744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46984059-5	9.17740777431737	-2.20050402607517	1.21043775579893	-1.81794067107793	0.0690732011941123	0.726186854124307	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17595087342351	0
Merged-chr16-50534070-1	2.06138012539299	0	1.41770260816575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33566732-3	7.68791136605672	-0.0120255485890285	0.904974969831758	-0.0132882665155526	0.98939780932731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25457122863917	3.19181942643841
Merged-chr6-48666264-1	3.0199739664402	0	1.41201376634843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55277759-1	2.60459520434075	0	1.39838212721941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157129272-4	4.56159685983893	0	1.36032669287052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84646778-2	7.35063832991722	0	1.35487386157432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117289828-7	19.9342071909496	0.955200405119753	0.339173605259318	2.81625807641915	0.00485866199883188	0.120654183460257	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66790804121502	5.62130777126423
Merged-chr13-9504559-2	3.86676459057879	0	1.3810062856589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34520179-2	5.28363297325918	3.41317461715486	1.16493451538981	2.92992831104566	0.00339040211745681	0.0935052606305606	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.4196938472029
Merged-chr13-41502457-2	4.30917408991486	0	1.41145613657152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84675156-3	6.77152045957977	0	1.35200335895146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38429311-3	10.0275208986635	-0.929923443243673	0.651856434888701	-1.42657707045946	0.153701837355928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87269664077423	4.07329947783032
Merged-chr8-124744871-4	12.6955228777038	-1.33277054136481	0.535398329759085	-2.48930649814414	0.0127992570897671	0.239531071777744	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13381544058246	3.81392034196203
Merged-chr14-78925444-2	3.76708494641681	-2.13130626031117	1.33717167204874	-1.59389127429367	0.110960389135577	0.969726011739687	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0
Merged-chr4-99061678-5	13.9371145047348	-0.390897439154557	0.648995423507376	-0.60231154950527	0.546966774348634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52171023487043	3.15667738423574
Merged-chr4-11550291-4	4.82335459617763	0	1.3715084846855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136676518-4	6.38301232572465	0	1.36592875093709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3724011-3	4.45882479421021	0	1.39615494256895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129502833-3	9.83992826685614	0.205259855154207	0.545041609889078	0.376594835018156	0.70647472671553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32504741930247	3.39384770208031
Merged-chr9-75435179-3	7.43185621532657	-0.289092794218604	0.770499652856291	-0.375201718971474	0.707510451875401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76862326339428	2.47248588654001
Merged-chr3-132033982-2	4.51495218712242	1.72608960983749	1.28342082237755	1.34491320363643	0.178653265798615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr7-25766297-2	2.81802565826555	0	1.41492164547076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91170099-2	5.01422462864179	0	1.40457614097202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123245753-3	3.19138614086295	0	1.39625589242295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35596744-6	11.2009308148322	0.014664809296413	0.681152653942526	0.0215294019799127	0.982823349506779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09275150598807	3.93006140189549
Merged-chr8-128519572-4	10.8316058017011	0.341374692921859	0.522573196266961	0.653257180736582	0.513590492274832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66839702766497	3.98381658540532
Merged-chr7-128412197-1	3.03515854854375	0	1.3971553779052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24697101-1	2.1427756952784	0	1.47647036475991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7221255-1	5.59998696536229	0	1.37209238098792	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-71593956-1	2.33258533710952	0	1.51074256792133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192981925-1	7.53123481819541	1.78664775848885	0.750899853936559	2.37934226398158	0.0173435639827536	0.29260670221555	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0900981927122	3.93208772209719
Merged-chr10-70287057-1	2.33372755673734	0	1.4039790210476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4531896-2	3.25548901079396	0	1.42850271208281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-87075101-1	8.3138915406021	-0.363721575063816	0.56070246454652	-0.648689096378385	0.516539353505025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85356759211969	3.5785255726206
Merged-chr4-24720986-1	1.65671013911843	1.90111176231038	1.51491398753284	1.25493049635544	0.209503992115247	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr11-98849294-1	1.99377747816022	0	1.45705783340299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51842387-1	2.8735895060707	-0.419308945603205	1.14652748139037	-0.365720798157162	0.714573425017916	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	1.32509503823899
Merged-chr12-16920322-1	2.5113564654596	0	1.41022312375413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30547974-2	2.31318054363334	0	1.43946241586862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84117921-1	2.22672148510683	0	1.47545196396441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79956666-1	4.69980135813712	-2.89063175190138	1.21842387292699	-2.37243525519349	0.0176712599084913	0.296022193333029	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0411132438942	0.303163067301871
Merged-chr8-105408578-1	2.53688267842721	0	1.45920513416718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-108191302-1	3.33897416013194	0	1.38147553685212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60828399-1	2.12331950413254	0	1.49387158219851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30195263-1	4.95478417329996	-0.899976048733191	0.894926900676838	-1.00564196701712	0.314587828490136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78974893682455	1.90258199709273
Merged-chr9-69480551-1	2.2219120801123	0	1.40717255025683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85464160-1	2.49711168749085	0	1.40309985656149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21037420-1	4.05733718785895	0.297071328719407	0.818437513120378	0.362973744430154	0.716624497612045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	2.46652732427062
Merged-chr13-55017414-1	5.98486515211268	-0.578558771592777	0.720974564079882	-0.802467660327437	0.422282488209605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62268423322043	2.94795545434668
Merged-chr10-77369316-1	2.14186208018649	0	1.44923780052208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59208683-1	2.6366569035671	-1.68040191201982	1.42907437326628	-1.17586736103812	0.239647883350543	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr9-32770953-1	3.03453070425794	0.633850651419836	1.37062880447398	0.462452452006576	0.643756892396175	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.94927122251658
Merged-chr6-140111467-1	5.09110360241401	0.554290760461198	1.05663097211102	0.524583109043066	0.599873031285522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00626573557989	2.64713677891815
Merged-chr11-34032391-3	4.46033740764403	0	1.37507457950399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62878293-2	5.88652289330185	-2.55134126161074	0.800572852952016	-3.18689454957531	0.00143809195659086	0.0478123796136528	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01255741346305	1.54667940924561
Merged-chr4-9621335-2	6.28929928758377	-2.09762131956064	0.961843790903735	-2.18083366488205	0.0291957215855079	0.416813280580524	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22066904677111	1.48914397899119
Merged-chr4-59596769-3	5.78343583921418	0	1.39142296695517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133075784-4	5.14172831836717	0	1.36890649289176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30447421-3	5.05040250385449	0	1.37139031704767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17348049-8	16.4385296792773	-0.143542301018954	0.514023399981395	-0.279252464039865	0.780051083856658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40200254347714	3.61758357783397
Merged-chr14-30212240-1	6.4848594932888	0.442077145147097	0.898057084353127	0.492259515402104	0.622535895981403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.82763546200327
Merged-chr7-80166585-5	13.6823373247533	0.152542866697794	0.556270804383863	0.274224110802928	0.783912400315661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0607915479903	3.1953199014373
Merged-chr12-55870147-2	2.91813950969702	0	1.40396985541337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152783939-2	3.80617748526709	0	1.37930352001637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129468985-2	6.64489528422657	1.34060731154576	0.625239531436271	2.14414995236494	0.0320208736865445	0.440998903655149	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97727367680107	3.80441654644248
Merged-chr14-70119559-2	5.00380624857434	0	1.37222393495068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27749947-3	4.51487506947156	0	1.38775293290338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94149234-1	3.67890376625828	0	1.37845666986633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-24574470-4	4.71093096315802	0	1.37736814737422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75751236-2	3.81888974153387	0	1.42183426987442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38693572-2	3.42399966318859	0	1.43694676908162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46917012-1	2.7387280974128	1.10919637913258	1.12899238644398	0.982465774305398	0.325870436302422	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.74618975104912
Merged-chr19-10277395-4	7.63656074020412	0	1.36537033611346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109438123-3	5.90732530357722	0	1.35892743364863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84591012-1	2.77616699825882	-0.857417442964501	1.1103131916888	-0.772230258437587	0.43997806318493	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84001395625789	1.02674429890598
Merged-chr16-11054596-1	2.89426504908764	0	1.39616900441284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78923949-1	2.74565666641626	0	1.38682443350528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193888198-1	2.94702132612153	0	1.40767824550432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120567291-3	6.55883706436788	0	1.3523138788027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38023608-3	7.02781663154102	-0.875913133092131	0.787548056054671	-1.11220277462195	0.266050975213816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57562851946334	1.44707113567902
Merged-chr3-75280616-1	2.29278243651713	0	1.43618563019496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97511923-4	13.0280371206175	0.123226111088629	0.437833903694539	0.281444881378121	0.778369198305084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89934426829726	4.03248731072705
Merged-chr11-22653166-4	6.55174106524408	1.54454095686013	1.21619110651966	1.26998211759671	0.204091000071326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.44790810950236
Merged-chr17-49009612-5	12.1716615985461	1.51647769266754	0.573896137816395	2.6424253322867	0.00823146128831555	0.176162993768325	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41041824439107	4.34883781961748
Merged-chr7-53551625-2	4.19232574965077	0	1.46006126192169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124027559-4	9.94594591257538	-1.1424388119229	0.72914731210488	-1.56681481637085	0.117157983151458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08475616112279	1.86501351763573
Merged-chr1-161286918-4	10.8621683956175	1.36556744074707	0.519672258609404	2.62774742758293	0.00859523079606172	0.181871604065052	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86697700090772	4.74027970057153
Merged-chr17-29414778-3	5.01307797999514	0	1.37911303095322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156752412-2	7.26480863222162	-1.19997693439981	0.675974613751822	-1.77518047273943	0.0758680929286475	0.769280668440282	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12394955388354	2.62713343757151
Merged-chr1-38049809-1	2.25730179572503	0	1.39319920213382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13197476-4	4.1438279862366	0	1.3984016078089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-170677447-1	2.19597277990926	0	1.51372490324307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25312954-2	3.65417865304361	0	1.42392726146479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83104802-2	13.2042650384166	-0.157041329183578	0.43432168694393	-0.36157837359812	0.717667128078741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7705238650475	4.62392578697719
Merged-chr15-63924640-2	3.97188187163537	0	1.37927614829721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117393801-2	17.1262657375038	-0.203849621229378	0.427681067538927	-0.476639338754045	0.633618965738127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.09412039564188	4.68436198475997
Merged-chr6-72375364-4	4.10277459336046	0	1.38115389932081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122470620-1	3.85159012571149	0	1.39769981994084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61514636-2	2.14618833360688	0	1.52204826290957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104938728-2	6.45922782666921	-4.4435246802942	1.07043174169238	-4.15115182708323	3.30806216987688e-05	0.00235678835507651	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15280584588044	0
Merged-chr2-45827391-2	2.92968063049963	0	1.43301132510457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11489236-2	3.77279245509663	0	1.36649790633217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49971969-2	3.51853678407894	0	1.37651990356951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126869624-3	5.82450731673956	0	1.36970675437925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112800650-3	4.06475257655215	0	1.38288027809141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171661765-5	12.446568957906	-0.499833356989511	0.697485378803567	-0.716621985462838	0.47360737499124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39213350996407	2.46086200638607
Merged-chr1-136629553-2	4.45039004912639	0	1.38086469764507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-44055903-3	9.97029795324013	1.13545395792254	0.626930716974052	1.81113148100788	0.0701205014532823	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51390733230198	4.15031991331122
Merged-chr4-138041377-3	6.63866859503823	-0.851580721104048	0.772367041006635	-1.10255963278051	0.270218448525323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06117532384274	1.48299123756315
Merged-chr19-58104766-3	7.3004833925784	0.0162536341974173	0.935759856998588	0.0173694501595208	0.986141880718934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.11816745933907
Merged-chr18-65501542-4	7.27181435939447	-1.10694755016535	0.602965149224638	-1.83584001760101	0.0663813210407942	0.709202482401048	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68360322248615	2.28284312426037
Merged-chr17-34556453-3	4.31130583918556	0	1.39614643822908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24715233-3	5.71262014695208	0	1.36762225678307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5301184-2	4.18572447316883	0	1.38449950358064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36161333-3	4.55536727181021	0	1.3758870394389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120039158-3	8.5236948285411	-0.817881011793554	0.834826675098864	-0.979701579009435	0.327233446460658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.27673210875742
Merged-chr19-29501131-4	8.33795430606776	0	1.34941289598459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-111226466-2	3.23460047064522	0	1.42997871045945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91864325-2	3.74207305495612	0	1.40624835976116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12813920-6	15.4084970264932	-0.624452573519094	0.443959917707114	-1.40655169219815	0.159560366225843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60510452562035	3.9435657594259
Merged-chr9-13681812-1	2.93958582182726	0	1.43585254577532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47504725-1	4.68222722984731	3.82755729314492	1.13113533652721	3.38381904405551	0.000714851002279185	0.0278936678371371	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.64818605663689
Merged-chr5-115528337-3	3.26771725918782	0	1.39847270681393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76787450-2	5.85932527875351	-1.79733639723447	0.814646646283214	-2.20627729265779	0.0273645902928399	0.39882332187484	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04548501690282	1.06872581468896
Merged-chr11-54093241-2	3.07780726763649	0	1.3909867459244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44245939-1	3.09351091050443	0	1.4216855845726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34611082-2	5.95623645480428	-1.4378231094778	0.972460713452085	-1.47854107583817	0.139263011146238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23562996408379	1.54998568242928
Merged-chr9-114727491-3	4.10682398749171	0	1.3801558586155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74017363-4	5.60312572136467	0	1.36746150492784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83512408-3	4.63052669361084	0	1.37037873854502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54983227-2	4.02690392888876	0	1.36329510752675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102778053-1	3.11236420286148	0	1.39774731026001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9081597-4	8.48841442752293	0	1.3683021660584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99517674-3	3.93570588321545	0	1.40564969505773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55613103-2	4.33926351049013	0	1.39528626932766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64396526-3	6.31582136713987	2.07114870643923	1.03093023004705	2.00900957802422	0.0445361179829434	0.546029432068414	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.00766992357472
Merged-chr3-84820479-3	4.73622708786617	-1.8716869715828	1.20919028584461	-1.54788455836414	0.121650093038352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.303163067301871
Merged-chr2-35329585-1	2.65324405492624	0	1.41485775041605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163754446-2	7.86143129940271	0.951757485815579	0.637032003254721	1.49404971956332	0.135162624441372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1690188381782	3.24837875368619
Merged-chr15-58986633-1	2.9811855498999	0	1.41899085951762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99171543-1	1.75635674036147	0	1.44095037521184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20176249-1	2.28878350989887	0	1.41102419005637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-70601516-1	3.41352982065804	0	1.37903705566207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95160262-1	2.75774694484187	0	1.41402461795073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85145978-1	2.90591710827349	-2.00870475581163	1.21334946573829	-1.65550388616967	0.0978223287798316	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	0.465515277017237
Merged-chr11-108040999-2	2.45360463090725	0	1.4683783685749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32516491-1	5.63507516769057	0	1.37181061160271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142441785-1	1.45767414285921	0	1.55039381400301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97347981-1	4.29637936228365	0.313812193888226	0.986031405187637	0.318257808257648	0.750289385801524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73330667186518	3.58751574511618
Merged-chr9-44130165-3	3.58895782834266	0	1.39333769460977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83538004-3	13.1231973489349	-0.294247679936104	0.583584710243978	-0.504207315186665	0.614115700444801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88128548026027	3.04347076739932
Merged-chr4-138951829-1	2.84175674577722	0	1.43409767716302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-19703157-2	2.53026881013192	0	1.59263694803097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97564881-1	2.32579834822287	0	1.42589713586143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40415651-1	5.37723791217048	0.571687615605095	0.671524728441356	0.851327719430395	0.394587330972267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8621248248179	3.58824854842185
Merged-chr15-36578092-1	2.17866096998342	0	1.4199692324773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95678589-1	3.39923766223241	0.800724104624394	1.06702329599169	0.75042795001041	0.452997002585731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39476335534657	2.33837292392847
Merged-chr3-60597175-1	2.20253093516373	-1.83247821185122	1.51418332373806	-1.21020895100561	0.226198724278981	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr11-79891322-1	2.89772752930072	0	1.41044931720617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22034646-1	1.43518350768952	2.3888618881638	1.46388233314227	1.63186742136305	0.102707418407596	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14143228603163
Merged-chr8-11067646-2	2.34267798773094	0	1.46109172542462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131115795-1	2.05767781752467	0	1.50843047381023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98087519-1	3.58143491624753	-1.51513081556819	1.1715862432026	-1.29323028872931	0.195931422870911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59280940140512	1.17858215524007
Merged-chr15-30529772-1	3.38904580256174	0	1.42022155989115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73028914-1	4.8010463697028	1.11697507545829	0.874501137160961	1.2772711526534	0.201506534372593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02932327927184	3.91146370497911
Merged-chr6-113033465-1	2.5905303296634	0	1.4212760135042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159302871-1	2.41411989689572	0	1.43699243659386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22881219-2	2.61353564372843	0	1.46621597015452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37749754-1	3.19178959709826	-0.640640500671136	1.05289077170808	-0.608458652963438	0.542883320842405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21836476644116	1.87845446409297
Merged-chr10-68467313-1	2.5655289500173	0	1.49120884929318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25437735-3	5.80167678096889	-3.460201346196	1.15201035289143	-3.00362000871887	0.00266788307496088	0.0775112004659532	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40130322020166	0
Merged-chr10-21192634-1	2.63560337987897	0	1.41398220003014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-153873674-1	1.58955635549544	0	1.49147299069642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94549985-2	3.87966964997316	0	1.40340840505413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-86881134-1	1.7046313326805	0	1.49015800093214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83652869-3	3.73281535283387	0	1.41415358423259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114311330-1	3.70298330864	-0.678773972746968	0.915889277584684	-0.741109203218299	0.458627229871481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73752739441368	1.86837022561939
Merged-chr18-5142001-1	3.13597101197857	0	1.37960885740476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52252865-2	3.80213652159884	0	1.39390375924355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25411621-2	7.19292574818564	-2.05498805368168	1.18882089341338	-1.72859348709907	0.0838818761010546	0.817423014391443	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57403368136583	0.303163067301871
Merged-chr13-36324889-3	4.98339849348486	-0.0135362271970311	1.30858949988648	-0.0103441355736122	0.991746721116268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.716426531808663
Merged-chr9-47715575-2	2.86506950824803	0	1.42414698322227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59228803-2	6.26603979096557	0	1.38412265341869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4404425-2	6.73871589858163	0	1.38567595122988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165655254-3	5.2067416605739	0	1.36115314455116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23566373-3	5.69040919093578	0	1.36666901822039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165658794-2	3.45183192609338	0	1.38640466186646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88939944-2	3.2132997331989	-1.31560013424434	1.36699658298008	-0.962401918647305	0.335847750270925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0
Merged-chr1-164057007-2	4.84021091378284	0	1.38388993594487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106440043-2	4.2957056560835	-2.01678210553677	1.1054854322311	-1.82434073460966	0.0681005757414304	0.720770871637153	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74879361603124	0.577068348605183
Merged-chr11-49728043-2	3.78293881434931	0	1.36556445971942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25585845-2	3.64627987881346	0	1.45218478739909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135700787-4	5.25194009998513	0	1.35781760205609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94089899-2	3.76066134646023	0	1.39841466073867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166082815-3	9.01039659073883	-0.0169002783027164	0.788898627664422	-0.021422623528641	0.982908526739486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3144475317541	3.95490739911439
Merged-chr5-148379663-3	10.4451019150898	0.365076469643663	0.59007441094017	0.618695647320112	0.536116877983299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71642742107674	3.55523434195721
Merged-chr10-68714550-3	5.43234212221202	0	1.3993673041318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80693947-3	3.62772891794977	0	1.42614745334532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116655782-4	6.21238705226043	0	1.36714345427634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66730307-2	8.09145693910415	1.87040674372311	0.934893935676501	2.00066197067549	0.0454288303257943	0.55331969251173	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	2.53640382118252
Merged-chr16-22300161-2	2.77970471466186	0	1.41423700238085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115643257-2	5.93974378266748	0	1.39003249284272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122928884-4	4.45283579573306	0	1.37899545716917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-49627180-3	4.97341638605804	0	1.38896452842906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65374211-5	11.3688614321534	-0.805750883143372	0.518755143950672	-1.55323931249536	0.120365972656505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73499190649826	3.01827587865744
Merged-chr10-94345807-6	16.2239182506734	3.46398811066542	0.62273656583262	5.5625256339877	2.65897957935174e-08	5.45431965864079e-06	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	5.20452193341805
Merged-chr17-73037131-2	3.74916261131567	0	1.39018789660092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191194730-3	5.36367295699919	0	1.36384616170719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83556492-3	4.95438265257019	0	1.3650560217139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45766626-6	13.7471902230734	-0.393669922838735	0.532570059198433	-0.739188987513201	0.45979224696835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52386918821341	4.17677898070424
Merged-chr3-121161824-2	5.5090754601593	3.16056263858988	0.982045517142367	3.2183463835635	0.00128932012700618	0.0440239653165382	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	4.23564627867365
Merged-chr17-56273361-1	3.84347267757088	0	1.39556621234867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180964201-3	5.05180106839573	0	1.38340768414302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3769598-1	2.45412708878334	0	1.49521722587701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95200678-2	3.82440180596589	0	1.4155266303871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173511793-3	7.42226606200143	1.31881668276297	0.757997037636036	1.73987049721983	0.0818817601902275	0.805029951560965	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9091002533888	2.78130560341466
Merged-chr9-7605795-1	2.30591028953522	0	1.4211589733416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117725115-2	3.42128699038946	0	1.44057442037073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85396913-1	5.25077425089497	-0.70971835254785	0.814561121477458	-0.871289254832783	0.383596235986026	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08529456966439	2.60219362730004
Merged-chr7-100501335-2	3.92254381744462	0.696235111207519	1.14592941929573	0.607572420677895	0.54347109704626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.17788344834821
Merged-chr19-55818158-4	5.19363975054113	0	1.36623758249115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45876524-3	4.8127630864402	0	1.37691385378251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65802390-3	9.82661080718453	-2.2007714492949	0.911194407942442	-2.41526004781399	0.0157239790279821	0.274747597551294	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4044790941682	0.67591700901439
Merged-chr4-132951225-4	5.83485775827353	-0.543307745791528	1.22108036447277	-0.44494020344526	0.656362967821849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	0.465515277017237
Merged-chr19-10795200-2	3.09496068035857	0	1.39979723458851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68983712-4	6.44084020033062	0	1.36582963017329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50945006-3	4.36865163124255	0	1.37927679992595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156344894-3	8.7935706653115	-0.765660176142634	0.648934801088445	-1.17987226892194	0.238051020740212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66282395120017	2.44624272831838
Merged-chr13-93188383-3	3.72116233214561	-1.88622723377959	1.28419667812275	-1.46879934040703	0.141887223031587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr10-93278605-3	6.31820077152484	1.00264957461706	0.752544490397742	1.33234591098678	0.182746547131969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40173839819892	3.25845206145169
Merged-chr12-56405038-3	4.24859293666542	0	1.38113205807918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121336797-3	4.11554623436726	0	1.39172461604379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120167673-3	5.85598453374019	0.674435291661761	1.09763899065057	0.614441813206748	0.538923412350834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.14143228603163
Merged-chr9-94236906-3	3.83485595711825	0	1.43973977684229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110798103-4	9.69611808693167	-1.95939486188047	0.934242123918465	-2.09730947868443	0.0359661883304091	0.475343066241845	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52686403234129	0.577068348605183
Merged-chr14-14349899-2	4.87853080000275	0	1.36442382623447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77543548-1	2.15300914208859	0	1.40408935779371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15830894-4	7.03348855976906	0	1.37603772040737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99227756-3	6.28879868637416	0	1.3737248381634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43722902-4	4.77771315731377	0	1.37516817716525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46837483-6	14.6743907402147	-0.631293493146219	0.469210184356196	-1.34543859914809	0.178483637275437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54547224189416	3.92227608744507
Merged-chr10-45486200-1	3.10849155548195	0	1.42036103363281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43399556-2	5.23947293755407	-0.684557789705981	1.05613506616095	-0.648172579094785	0.516873335176675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.577068348605183
Merged-chr9-120052419-2	2.37696106624564	0	1.49487137964286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32789747-2	3.50420940731058	0	1.41893094532283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43496073-4	6.6287051184264	0	1.36415644549163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38402461-4	9.98216925028539	0.0333103178359021	0.625857466208123	0.0532234887884601	0.957553840789515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14348572890932	2.47637400116842
Merged-chr4-122808322-3	4.091986451955	0	1.37428587339491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6335455-1	2.12121366581171	0	1.41688136686806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5436169-3	5.37302315507635	0	1.37126643154759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16231404-2	3.97010912142851	0	1.42439537529054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129491215-1	5.50856548568748	-0.14644108188555	1.05415336471339	-0.138918194247157	0.889514793442801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75421478449417	2.61391240479312
Merged-chr1-51699552-1	1.61639336815713	-1.61990736478941	1.55560243440593	-1.0413376380502	0.297718874290819	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr15-31465959-1	3.39106914618943	0	1.388302563662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43548403-1	1.32904697120325	0	1.68326591076101	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17326720-1	4.8762241030151	-0.0359234867135628	0.976216755627044	-0.0367986786812406	0.970645527596104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41316001406225	2.16723484198871
Merged-chr6-113675384-1	2.43651478177748	0	1.50174405725139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34060887-1	2.6607400898752	0	1.40203484703091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81439491-3	6.17738232701739	-0.787228485993513	0.706491621830203	-1.11427858684885	0.265159690362858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04531397392308	2.39184402524781
Merged-chr9-40519507-1	5.08439314035879	0.662376813688071	0.839404133313734	0.789103588367133	0.430051464836705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72081599314607	2.64315672433764
Merged-chr1-62679181-2	2.67983303693413	0	1.44401151161772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134079755-4	4.97544579494198	0	1.3622448316905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34116189-1	2.70415345983937	0	1.48039895203129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70880760-1	4.34228286203902	-0.692698082243995	1.0255252772361	-0.675456858665535	0.499385551691687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95001597236927	1.16492870185157
Merged-chr18-53915193-1	2.48562958320437	-3.03828919927006	1.20464052206255	-2.52215423906543	0.0116638553202872	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99708834426639	0
Merged-chr6-99031692-1	2.3396765004365	0	1.4866803813709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119089319-2	4.52138905150704	0	1.37988229144721	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131300934-1	2.03030136798908	0	1.59010464991403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50000975-1	1.95929064555688	0	1.41694975417726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8380890-1	2.42405581917713	0	1.40356295120588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70849747-1	2.27215436129696	0	1.52662769911187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28807207-3	4.01030881000633	0	1.43674002894772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93042117-1	2.56001851477271	0	1.44983692297245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9038407-2	6.52654815006123	-0.418482828610754	0.758540956052039	-0.551694440849737	0.581157719360002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53085682714358	3.93055077535233
Merged-chr5-140738402-1	1.14176773546032	0	1.59682642205994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57479861-1	1.56530643868982	0	1.5073947259319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34386598-2	6.60052066468022	0.262530439125572	0.654363971087072	0.401199410000278	0.688273315094097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00708887812977	2.85614624096806
Merged-chr17-28716229-2	3.40316637888666	0	1.37798093583523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9988125-1	4.65138257082411	3.44331587246469	1.164039187714	2.95807556034849	0.00309566231556937	0.0870548928153314	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.60575736942423
Merged-chr16-25794545-1	3.2130161331016	0	1.44523453935626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4000877-1	1.61480927200189	0	1.63533356848422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24039598-3	4.67415254546968	0	1.36008204063863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-93648263-1	2.29053748135752	-0.0355750259668335	1.4282692731296	-0.0249077863930252	0.980128516518654	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr5-117160699-1	7.89306753447888	-0.201570010882872	0.797972575558981	-0.252602679661856	0.800575259093224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42678330787402	2.46263348069002
Merged-chr17-49968682-1	3.27613923431719	-3.53740585586097	1.44428286608488	-2.44924726238016	0.0143155136688097	0.258702462607322	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52860153008918	0
Merged-chr4-53232591-1	2.88651180183154	0.408935319904757	1.1079055375224	0.369106666638074	0.712048220012429	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.52554022439958
Merged-chr1-153921834-2	4.22567642768487	0	1.393591142981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25187671-6	11.0037911783895	-0.0110412521980526	0.603221112393136	-0.0183038225473394	0.985396478026488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89578973417781	2.90144974556557
Merged-chr9-116058642-2	8.12303510591389	0.0638371261114411	0.661861125766182	0.0964509375551286	0.923162438341026	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84583565619994	3.07389803427425
Merged-chr15-78254913-2	6.78363149592146	0.369370430728227	0.741611285019555	0.498064738481545	0.618438413055273	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25624284013603	2.97856909780133
Merged-chr13-65176370-2	3.90740026781563	2.31766326135992	1.25455055557984	1.84740523293516	0.0646884313521472	0.698529686108734	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.730937814817307
Merged-chr4-132621905-5	16.4364492208575	-0.465501284562129	0.488296839705472	-0.953316193573785	0.340429889118951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95958694306791	3.95060595092776
Merged-chrX-103634066-2	4.57354442631461	0	1.36479767892828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34869019-4	5.98165629571064	0	1.38474603499615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146804584-4	4.96219405004175	0	1.38756666868948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37417707-2	3.9597742188845	0	1.37090925170766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17549136-4	8.97817189004912	0.544189988652532	0.60640576582232	0.897402398399989	0.369504233215269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98700836604974	3.42659106104129
Merged-chr10-93242352-6	17.3764813387556	0.530717860400352	0.478860838812021	1.1082924670077	0.267735527714729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62242077417823	5.01023551241304
Merged-chr17-8225901-6	14.7393282614735	0.035543336790687	0.528129000780935	0.0673004829087773	0.946342492456635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59729627233677	3.70844771322606
Merged-chr3-94366946-2	3.21118391926568	0	1.41682934912615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51756759-2	3.33795107955402	0	1.42492586990629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114854342-1	2.37581355184729	0	1.38562037812767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17250976-2	9.51469054223181	-0.812735575065799	0.567150093735288	-1.43301673409426	0.151853055124499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95431861507375	3.15243450461441
Merged-chr13-99181390-4	5.62625611800474	1.82683703097207	1.39783235811338	1.30690709824295	0.191244265075881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr2-119872713-7	16.8102244208789	-0.826537777381734	0.442210471156542	-1.86910494276636	0.0616082154945014	0.677927325114494	C57BL6J_F1_Control-BALBCJ_F1_Control	4.97311013015482	4.08458086994268
Merged-chr4-108387793-5	7.96914740373659	0.987145994390995	0.683488566231819	1.44427579796	0.148661410822249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	3.17864761205025
Merged-chr8-121104229-3	4.03057178406274	0	1.38257852094421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100622529-3	4.94046938137616	2.18706063072654	1.2530531992312	1.74538529734283	0.0809178232066414	0.799893062682273	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.815775955292901
Merged-chr1-173580029-1	3.00445091472293	0	1.44220489053054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134106944-3	3.15939125780027	0	1.54049431753407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37140706-3	4.58571523490812	0	1.38896103975891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17485614-1	3.67838714514727	0	1.37187599449167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58422847-3	4.86379693102731	0	1.39225553536224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172456509-1	4.51613606992805	0	1.36404468208883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123019526-3	5.47626316902711	0	1.36585011948941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86960725-3	7.24260164152451	-2.40054429010019	0.861914527076912	-2.78513032868975	0.00535062121735228	0.129901398392984	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21192255592235	1.35339221635894
Merged-chr8-37898206-1	1.6296102040331	1.60463722056619	2.18711636074351	0.733677114472637	0.463145549695539	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr19-46521513-4	4.73929756167356	0	1.3659155055448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9743244-4	4.7777140540949	0	1.3700831185323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173763271-2	3.14664202453389	0	2.20837230890541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41029539-3	5.34811625238408	0	1.37469905778528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131933686-3	3.36642182852713	0	1.40455127536834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110377001-2	3.63278486378164	-1.84091956239599	1.36553322220864	-1.34813238700883	0.177615806340717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr11-79920062-2	4.14066316530646	-1.8498253522064	1.26359666133295	-1.46393656204745	0.143211282338099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr10-51518089-4	4.76872159418724	0	1.37569306824228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87695498-1	2.31011624695869	0	1.4109686458058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19910977-1	2.5011944041943	0	1.40650421270222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72850028-2	4.60361916395137	0	1.37322820986816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39100941-2	2.35130929687658	0	1.42287608770415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27688847-1	3.58169859773149	0	1.39174605890262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27743448-2	3.11726383729028	0	1.39458984932527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115480121-4	6.01183648479677	0	1.35880031058081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37323614-1	3.89433910577981	1.92273417871827	1.02941773326781	1.86778808697486	0.0617916146281376	0.679120578158295	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88772579123251	3.71301868048677
Merged-chr3-84443070-1	3.0419309644843	0	1.49268063090597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16204928-2	1.9611555664735	0	1.52516581768903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112030936-2	2.36689249427795	0	1.52303664715765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123019858-1	2.4695724040981	0	1.4781797894066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59312227-5	17.1886446007815	-0.266069368469536	0.500555012766529	-0.531548704305229	0.595038600196134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90842941853952	3.47204262858325
Merged-chr16-38442369-3	7.87194392903026	3.80359538035547	1.08328931243781	3.51115379491369	0.000446166193515142	0.0198146634912497	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.44019262356817
Merged-chr2-167004643-3	3.89866447189048	0	1.37479006215868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99874832-3	4.49220455645193	0	1.39152818158843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-6694678-4	5.55680410101214	0	1.37417512050351	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40774501-4	5.08549667726051	0	1.36391247273137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21436270-3	6.70749474587724	0	1.3586557133794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102522525-1	3.33985601330859	0	1.41540036527286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34764915-2	3.60401378262355	0	1.44065143208763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151977957-4	11.0139313684426	-0.513401539846526	0.531537978601038	-0.965879317217849	0.334104572899803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06798680126691	3.13782385223689
Merged-chr14-118982809-2	7.0514880387996	1.96193920536225	0.765825527221375	2.56186185446274	0.0104112721623142	0.206618626402439	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72602775347308	4.18294018660244
Merged-chr7-106558741-1	3.07105232711699	-0.372514020117684	0.900643445871397	-0.413608761408646	0.679160655729966	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66559184936653	2.06876131291247
Merged-chr6-89579977-3	4.08454723305512	0	1.37910664657228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87595697-1	3.55528225941614	0	1.37958905772315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152042361-3	6.81816838778658	0	1.37418382603303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80311107-4	5.76964699086692	0	1.36438152180718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102999034-7	15.4994357301912	-0.8500413022476	0.660335281598039	-1.28728742191461	0.197994125985998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1693666644802	2.11950720347124
Merged-chr3-65538595-2	3.93629575769158	0	1.39581267168135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103745491-3	5.64456776063901	0	1.36838074317576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61607810-2	4.91359757000198	0.832556593431456	0.844906107794375	0.985383565997461	0.324435698928034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71702628909212	2.1881845164991
Merged-chr5-24077509-7	15.5042105756291	0.582995475915582	0.411726389312426	1.41597791895043	0.156781969546572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07834909717697	4.58038955511712
Merged-chr13-45375946-3	5.4851161483686	-2.54449183623787	1.35134745060518	-1.88292939398995	0.0597099371255128	0.664497320297098	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	0
Merged-chr14-62374180-3	9.84879427522629	1.70165153249132	0.653161282933587	2.60525474634469	0.009180597306349	0.189560363688846	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	3.82495268909485
Merged-chr11-74547299-4	11.8716440346256	-0.0809347529243817	0.902578247265618	-0.0896706220979461	0.92854896203722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	0.730937814817307
Merged-chr18-75895842-6	19.194524203153	0.239941720950388	0.472708080470123	0.507589632721655	0.611741162674574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97830136003053	4.23625986778365
Merged-chr7-116371748-2	4.1217970221468	0	1.37046142272699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84590360-3	5.71397569090842	0	1.40130096906651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117019312-3	6.94043735798486	1.02633226033573	0.943559633607134	1.0877237895523	0.27671706227056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.17597978119962
Merged-chr4-128664198-2	3.12556624629139	0	1.46437765353965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-133115126-2	5.46982650512027	0	1.37410110062861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137945701-2	3.91512625928312	0	1.42909782083837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186834106-2	7.2021563320755	2.38724278032356	0.873567387918324	2.73275171823007	0.00628076579820755	0.144359635758688	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	3.20956415130589
Merged-chr11-97512393-4	13.2468736961311	0.579225619575609	0.629634607708453	0.919939298895423	0.357604480848656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35639125793769	3.14452038345387
Merged-chr5-113671784-4	6.5625669140483	1.27971896055725	1.15453329375834	1.10842967238423	0.267676296100753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0.788686275880602
Merged-chr7-66323464-3	4.92585302340143	0	1.40809702048772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122897090-3	9.9971700999955	0.719029031773772	0.87721139709107	0.819675889025327	0.412400898547332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	2.26908310412671
Merged-chr8-10794801-2	3.51275917342292	0	1.45942363553914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29946173-3	6.78181821934913	0	1.35126238859645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102394100-4	6.71936559493237	-0.614553868898615	0.865614576980197	-0.709962476651632	0.477727405490098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67175145105019	1.39949824061849
Merged-chr10-21937531-6	12.9952473713704	1.28837649178319	0.52522995337109	2.45297604128246	0.0141679774833697	0.256819690095646	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64882921011897	4.40728116595808
Merged-chr16-91363550-3	5.54982271869757	0	1.40557543345186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54781114-4	6.49623860654367	-0.0347259229989479	0.713233346591284	-0.0486880249849668	0.961167919236073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00523365194985	1.98274544168934
Merged-chr10-84019559-1	2.22885100469091	0	1.53305118008524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53899419-1	2.94166948672762	1.05109020426717	1.14531459959607	0.917730555986856	0.358759946400317	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03283973350588	2.87048188254608
Merged-chr12-12164612-2	5.218870916972	-1.21127026957852	1.08395193990444	-1.11745754123131	0.263798743997562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77338015316878	0.724326877898254
Merged-chr12-112717317-1	2.16471104050104	0	1.50015364589381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19494007-1	4.27110333083735	1.64145044428576	0.998735007797998	1.64352949628232	0.100273427703986	0.912719902304248	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	2.3524802242367
Merged-chr6-31077976-1	3.91542671668055	0	1.40033463822812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100382697-3	5.67162964379998	1.25885436134201	0.994186674990379	1.26621528231023	0.205436017609916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.76271631669283
Merged-chr12-70119786-2	5.14951731562528	0.0327815465123698	0.877889886663906	0.0373412964545518	0.970212878629454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05629245276768	2.02497645810754
Merged-chr8-80483433-1	1.77447347830836	0	1.55381721979448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61370595-2	2.97621962341956	0	1.4515997720216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135494456-3	4.82777526816036	0	1.3766002475071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44261959-1	1.71587394324634	0	1.4591420871804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3546843-2	3.31229243074225	0	1.38819474862362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38472317-1	2.68538614248384	0	1.41586690867067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37608647-1	2.96278619806523	1.77941740791845	1.35851132713162	1.30982890784984	0.190253721442983	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr4-28990627-1	1.14537699570635	0	1.93383130061481	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141160434-1	2.12448261971875	0	1.46915667857119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102848129-1	2.59542177189744	0	1.46975730581792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32366396-3	4.64482407142598	0	1.46493768556702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65539981-2	2.81838772695625	0	1.43456632870077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25261332-1	2.15123761520428	0	1.48089662695946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91488250-1	4.11944909673325	0.299788768989194	0.783609358746993	0.382574258006007	0.702035459899519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86123704904507	2.57812733526085
Merged-chr18-84784059-3	4.38153486609585	0	1.37336071419254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41684742-1	3.31547351770598	0	1.39099510199434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141661120-2	7.93764116192726	0.0628880793652251	0.66956888575675	0.093923240316265	0.925170132338666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20258316248954	3.89077369347885
Merged-chr2-128316640-1	1.42030421126481	0	1.56389294005212	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89163820-2	2.53698713386774	0	1.56805807810152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126705613-6	14.3343326991164	0.920721449174111	0.505670212197072	1.82079431804712	0.0686381283457437	0.723923170109872	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21947168897144	4.76046569800899
Merged-chr4-86657345-3	5.93205978559831	0	1.37249417759529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96914267-6	11.4746384745782	-0.132612122057953	0.587442621804228	-0.22574480831959	0.821399905505301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45651939465293	2.4657467976946
Merged-chr10-93592654-2	9.48178421545675	0.69872954810904	0.578720292191194	1.20737004998297	0.227289664363496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29602312433432	3.78257165420163
Merged-chr15-64260223-2	3.43512764086456	0	1.40681670890913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85114900-2	4.36816389572319	0	1.37530272340611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-53626163-3	5.37020549516562	0	1.38479520748366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53091033-3	8.75711735456976	2.67932663240049	1.07677073306977	2.48829815866371	0.0128356073197383	0.239701383552612	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.37977331127176
Merged-chrX-93886136-3	5.30652300355063	0	1.37857270158444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35346214-4	4.08549232376471	0	1.3982112118734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59569783-4	6.31083126818199	0	1.35840395908399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20105542-5	13.2586623378459	0.866762826330523	0.661162978944671	1.31096696871023	0.189868923489216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08153858449613	3.15215787513841
Merged-chr3-22143408-3	5.16467778719849	0	1.36314449240517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60454389-2	7.00959786177881	-1.4125623516499	0.915225509140545	-1.54340360658914	0.122732879167197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66903509972514	1.93957782847288
Merged-chr12-79359026-2	4.11497150674271	0	1.37153859771816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73718466-2	2.28086613885579	0	1.43157920377639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69033731-3	4.52929015804485	0	1.38433246719462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7878427-4	5.05976631269277	0	1.39852634922091	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83872955-4	5.85649939392827	0	1.36001385898057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92467617-3	4.73295821781825	0	1.39822140540088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135490710-3	4.56211168490003	0	1.40640723511463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95090144-1	4.0669852134664	0.530695629748575	1.23339180000714	0.430273356564803	0.666996805878762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.0754104773304
Merged-chr1-138186914-1	3.15683957784388	0	1.4004975843861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148527938-2	4.40089520990038	0	1.3833547861275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86402476-2	2.65469830778638	0	1.42045455322665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119615215-2	8.1186166956499	0.68729748832683	0.70995841766173	0.968081328749458	0.333003753912288	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40500539984967	3.42055381709449
Merged-chr4-6372448-4	10.4320733390344	0.894900416603163	0.588859694935794	1.51971755632	0.128581977241765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57618756717262	3.45214347177347
Merged-chr6-126910508-4	11.6904453041564	-0.413720831281202	0.55267644725226	-0.748576917540265	0.454112248811766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16921841998578	3.76144673928724
Merged-chr19-7064785-3	5.03336476011531	0	1.35933090328811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107630354-1	5.68563487719023	-0.529675004698478	0.651288970576986	-0.81327187873185	0.416062196361687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98770924392704	2.39184402524781
Merged-chr12-36469983-2	5.67544103215065	3.7896369998608	1.10043888627674	3.44375053182896	0.000573704791310878	0.0238061211838687	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	3.09067305521944
Merged-chr18-23914712-2	3.47341202955352	0	1.37719999348445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67647355-3	5.84427457843208	0	1.36612509816647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17565437-3	4.34107716181611	0	1.41457661604164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30998249-2	3.46604726170675	0	1.3927467319861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31984829-6	9.56668318654788	1.93389173449627	1.05237533552816	1.83764448786298	0.066114808776631	0.708055947520591	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.97656658922368
Merged-chr2-102940341-3	3.74730345552129	0	1.41274576086153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81746647-2	5.64161018478393	0	1.3588926215997	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120699756-2	2.5010324061382	0	1.46634051584712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44397921-1	2.7857269037802	0	1.44303108064785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71711007-2	5.35655639780838	0.0771372049846	0.872988407284151	0.0883599419430692	0.929590598419199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07952021438838	2.23655663346752
Merged-chr8-79475281-2	2.97944994578796	0	1.4036731768128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32565945-1	2.99927581710704	-3.5843532864402	1.55203103539999	-2.30945980118009	0.02091807988995	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03873341423583	0
Merged-chr8-125783607-1	1.87834677174144	0	1.40661750620027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26576394-2	3.28069260808661	0	1.45684123968591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56891609-2	3.40071283101436	0	1.39594595629144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60982155-3	10.3825899337353	0.446736689546445	0.513867001332143	0.869362477816886	0.384648899592531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11038056962808	3.27771914929354
Merged-chr1-51667873-3	6.12264427174922	4.28903442349834	1.06571754882068	4.0245508092126	5.70841690134305e-05	0.00370511555429635	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.93121731748374
Merged-chr16-21631868-4	5.89188141958983	0	1.35493881421669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138983383-5	7.90169508720255	0	1.37152218802622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142376261-3	4.94999934442886	0	1.37268793258235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99002084-2	3.26585642229197	0	1.37872699270367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61126359-2	8.95182446154401	-0.515471303317327	0.65959505072808	-0.781496620916629	0.43451046335398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31279000643091	2.95741208968871
Merged-chr19-20881485-2	5.85949014014981	-1.35296452730722	1.17086068657697	-1.15552989592864	0.247873497333183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.679405493272835
Merged-chr3-135579465-4	11.0924422374727	-1.2113520271054	0.720270186913945	-1.68180225853236	0.0926071906380879	0.866465987312787	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89709308729957	1.7242372353672
Merged-chr19-23116437-2	3.40532252610452	0	1.43390098110793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45911391-2	3.74096069009426	0	1.381272246589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66825586-1	2.13562094454328	0	1.4347037076483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126936184-1	3.14939538284988	0	1.3961389033195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108834492-3	7.2314041255788	-0.691623713458195	0.69155151409238	-1.00010440200671	0.317259986041931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73498516217529	2.16517866554277
Merged-chr10-57571431-3	4.38591547523534	0	1.37205230615939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103655263-5	10.2197028176116	-1.71112056832795	0.818371240519528	-2.0908855096639	0.0365383283459149	0.480277629928903	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9185122841552	0.837303648891292
Merged-chr7-139950523-2	4.88737817937109	0	1.48911014302197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17717384-2	9.13861294396084	-0.61584659293527	0.600598250046339	-1.02538859027271	0.305179869642099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06047030868957	3.27190153284941
Merged-chr4-149779068-2	4.67842321565775	0	1.44050544029742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125160492-3	4.52780128858984	0	1.38933836607096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-48131018-3	6.60455229111532	-3.50045964197379	1.03984362733816	-3.36633273498479	0.000761747636810393	0.0290581331855271	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69697713284534	0.577068348605183
Merged-chr5-124050982-3	12.4571346796463	-0.280427949944566	0.576089722843126	-0.486778254888135	0.626415481882198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06178072097658	3.91453054558337
Merged-chr11-62808174-4	4.98658649949309	0	1.37065858290806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62033445-7	16.627635831837	-0.647486320880183	0.440059646357178	-1.47136036271466	0.1411936868739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20561360181268	3.67319613243499
Merged-chr15-77798787-3	4.42987764894618	0	1.38426338323654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-74104707-3	4.59663802690065	0	1.38624436331013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37638768-3	4.4175419832323	0	1.38584340382953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34831338-2	5.24184606643486	0	1.39187786450059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108612123-4	7.69557167105632	0	1.35191797194277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45034183-2	4.15848814450009	0	1.3676970369283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24012344-2	4.2883476659176	0	1.37197799438259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77743775-4	9.3221748723307	0.897039447698682	1.00274635710795	0.89458260440443	0.371010254303065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.948471875794396
Merged-chr17-87249234-11	46.9385864546067	-1.10810892776044	0.335629629344303	-3.30158255075775	0.000961410393309826	0.0347482098204314	C57BL6J_F1_Control-BALBCJ_F1_Control	6.41051199754813	4.91612332071575
Merged-chr3-37728293-4	4.97947571261663	0	1.36246212301339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45155791-2	4.92568420388348	0	1.38158637537113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80693576-2	3.74088367803109	0	1.38468040409171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37414641-3	3.42871681120817	0	1.37723129612681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90017385-2	5.89352194527439	-1.03199090255578	1.02286253393952	-1.00892433568869	0.313010923122798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7204458171722	0.878778741524029
Merged-chr15-102274185-1	2.17601316890531	0	1.41992758708781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76762549-1	2.1855272663327	0	1.4367367647171	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62169471-2	2.36923459432444	0	1.43664484973226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64537399-1	2.59720731556033	0	1.42005340909685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35051126-1	3.47254128147713	0	1.38125684658633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29748915-1	1.57930888175815	0	1.71932393290985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34644846-4	4.20812998885896	0	1.40161175183945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143008754-1	3.26440941103548	0.48638489930175	0.974750493518048	0.498983999019381	0.617790656505214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13132003301738	1.4068548238317
Merged-chr16-55152595-1	1.38798247794361	0	1.54122235844193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22459642-1	3.6256403374949	0	1.41757469663388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139687839-1	3.7891757675094	-2.26535742292305	1.0508186572624	-2.15580243771534	0.031099095060973	0.433021441705797	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29634386091912	0.577068348605183
Merged-chr4-134607911-1	1.46552940478741	0	1.50137159311744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65328171-1	1.60287022977476	0	1.7089330734695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47911825-2	2.93422334345708	0	1.40721681946595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8769693-2	3.64034389134141	0	1.47465684857028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99421765-1	3.43679523903441	2.79733762179293	1.287358272531	2.17292861007002	0.0297856907797154	0.421426435474896	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.44790810950236
Merged-chr1-36131854-1	3.05408732036284	0	1.41188842855811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40602447-1	2.91595322231539	2.5537696158275	1.13063886343643	2.25869612164724	0.0239022938922448	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	2.5515096270106
Merged-chr2-31026871-2	2.1415004007805	0	1.4924289579265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40912948-1	4.61687873053331	2.87626518925391	1.2209864901395	2.35568961039469	0.0184883588245831	0.304331971871439	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.48155717851575
Merged-chr8-4201517-1	3.32330250691766	-1.3481051589584	1.32321721515895	-1.0188086608263	0.308293813208297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.601513806634888
Merged-chr2-150897245-2	2.53902095600774	0	1.55138774808081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159080711-1	1.81912524623892	0	1.64969818159415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5746236-2	4.49513618772234	0.530699426853906	1.14509858577922	0.463453045392396	0.643039663895584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.14143228603163
Merged-chr3-117328932-1	2.26841598376112	0	1.42972825669032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55561989-1	2.88488469532986	0	1.41396791693179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51733735-1	2.9179980531115	-0.689661201651143	1.42635558913624	-0.483512811884995	0.628731665060942	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr5-121918715-1	4.44762102805502	0.402220978570228	1.13231076716122	0.355221366991523	0.72242375864583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43680635795313	2.39186931183497
Merged-chr5-125059622-1	2.25393701935764	0	1.47104546410356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112863403-1	2.14566445945251	-2.9153660638406	1.34314474813937	-2.17055240537492	0.0299650231557122	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94767211644437	0.303163067301871
Merged-chr11-35657313-1	2.79359450292529	3.52400926484398	1.45595555147386	2.42040992341877	0.0155030196593092	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.12298178480948
Merged-chr9-21787087-1	2.11996697019379	0	1.42602970304492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-10539396-1	1.78892528754737	0	1.46534024528549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48776827-2	3.43713587230152	0	1.38639162754359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143057397-1	2.92140711986359	0	1.38576711745119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102579960-1	2.82216038731048	-1.29314920890833	1.35823518589067	-0.952080480863369	0.341056167366138	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr11-78360248-3	4.11389076616275	0	1.38223871690472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85241076-1	1.72830298096744	0	1.48823994299841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61581439-1	4.71809022796834	-0.785513513037243	0.990219635344657	-0.793272002492494	0.427619365106966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35601144634977	1.83150711868652
Merged-chr6-106645886-1	1.98578795731027	-1.98945251196498	1.44087663213382	-1.38072369805787	0.167363931927758	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20997209872237	0.303163067301871
Merged-chr3-8767062-1	3.08749795460346	0	1.42374797500878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119909666-1	2.24128788567928	0	1.40130182379187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19904869-1	2.78113066051028	0	1.40976144369285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113751910-1	1.83573323612431	0	1.53085704277781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30148591-2	3.15316963481385	0	1.41758486987749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21027967-2	7.47448001880032	-0.185454381848441	0.553308987932746	-0.335173268269741	0.737494385749012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50611651075361	3.45700499096724
Merged-chr9-46215796-3	5.21470679245918	1.76216551086776	1.35268364990067	1.30271812703374	0.192671011113114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr9-47628750-3	6.91908634507221	0.526708048490746	0.666934925588122	0.789744288809406	0.429677120678853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76331258957479	3.25883697360842
Merged-chr13-113800415-4	5.99146694680736	0	1.37227457903504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39635594-3	8.2909744364011	-0.15497337200063	0.746437542771	-0.207617333160015	0.835527769357986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48322226672997	3.01905864107165
Merged-chr3-62492780-3	5.5693596273655	0.589777703904629	0.957586364973997	0.61590027330918	0.537960341174834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.51226750748471
Merged-chr14-14632666-2	4.31378516969106	0	1.35848977447886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114647831-3	5.39428515748659	0.204522582684132	0.894366428708359	0.228678734039137	0.819118624624608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	1.39949824061849
Merged-chr3-109047917-4	5.29004336378661	0	1.3681529128558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23015062-1	2.71138394091708	0	1.38838929578586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55012012-3	7.0989167107434	-2.18987058565754	0.705887916945682	-3.10229220969375	0.00192028305532423	0.0604427716296293	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58448666264148	1.99125538440942
Merged-chr9-54567004-2	5.13356117995334	0	1.37059144542939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59202418-2	6.20296906478642	0	1.36096058775037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-26035203-1	2.42396802056015	0	1.46132997746381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108527607-3	6.79619519651095	-1.38867400247676	0.975394782179123	-1.42370456337108	0.154532012175994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96819405909084	1.14143228603163
Merged-chr11-20586402-3	3.89057043369062	0.623573958670416	1.37572460298348	0.453269467826696	0.650354715532986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr8-81349627-1	6.15934946918726	-0.660765151850337	0.871639104292971	-0.75807194582707	0.448407913331094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30944904015933	1.25298535761957
Merged-chr11-75152904-4	5.37481765699869	0	1.37003727648243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105262776-3	3.91412463373927	1.18407376841265	1.43096594387406	0.827464674111673	0.407973736668336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr8-67714232-1	2.27739122697554	0	1.52231220738337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-108155874-2	4.28366068602477	0	1.40052739877648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52488004-4	5.1046944006009	0	1.3813714110884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139249485-2	7.23655859425008	0.285789677071516	0.837492043828243	0.341244647250795	0.732919414581157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60176896768057	2.82989394467611
Merged-chr16-43448259-2	3.42160886470889	0	1.37585514577852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33039605-2	3.80770782089996	0	1.39333484136903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41071699-4	4.73279229300004	0	1.36196377682902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59561937-2	3.90435522075986	0	1.39477225713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44437606-2	6.66563703052811	0.611459347891205	0.858502434238243	0.71223950393776	0.47631647839618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42629324027793	2.15285118187279
Merged-chr8-94076958-4	5.83676608241921	0	1.36929056666558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122089088-3	4.53240119806887	0	1.3720955516022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66096902-3	3.50969140945492	0	1.37543687574146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28543808-3	4.39439466456469	0	1.39861134494323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11061037-3	4.37669874807107	0	1.37910268268399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133087850-2	3.15134368942192	0	1.38834466429866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31403311-2	4.78483919594914	0	1.43229119772984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32507008-1	2.23468590004665	0	1.60376826504748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121847169-2	4.17507212928066	0	1.4618615316074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92269196-2	2.91491785167203	0	1.40240697168036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125446158-2	8.39979723300593	0.73286539115672	0.846445731988679	0.865814976035016	0.386591635129538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04809232948217	4.62138991127068
Merged-chr8-36523883-2	5.84416433742669	-2.20481681280634	1.0231488860957	-2.15493252523573	0.0311671147277483	0.433635318527175	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27358406210341	2.30741877293786
Merged-chr1-54815309-1	6.23422250380594	-0.941515489404399	0.923016342417123	-1.02004205791073	0.307708514624375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03247245696714	1.18909650862134
Merged-chr2-16353064-2	2.42394535828175	0	1.48285548752112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94582238-1	1.73395078760801	0	1.55865774325121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96499650-6	14.5578545934535	-0.0845284720244029	0.480165158009351	-0.17604041154264	0.860262194357394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05592650899962	3.9892907471719
Merged-chr3-85601968-4	4.73899726240584	0	1.36653388748218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23535210-6	13.4237866080629	1.06715955383459	0.599858788025749	1.77901795412019	0.0752368184838191	0.764969969942597	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43782267534944	3.63412887212917
Merged-chr18-67167207-3	3.73852945006843	-0.95764617825875	1.0362798072405	-0.924119307900884	0.355424201694341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93227003100029	1.14143228603163
Merged-chr5-135537951-2	4.2689269804484	0	1.36393333384676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11820407-6	10.6039717176687	0.221137929945166	0.74852402790988	0.29543197238792	0.76766391223822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	1.60401468765691
Merged-chr2-168574058-2	3.11372794908576	0	1.41040941789133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74004370-3	4.86186027544316	0	1.40889101059068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25009451-3	8.79370786191957	-0.195652176283322	0.892412179533202	-0.219239697496803	0.826463333476182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65117231954624	1.56533893459231
Merged-chr4-58968176-4	6.70851266995948	1.39249375237189	1.06169397671362	1.31157733105186	0.189662785846028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.87899674908729
Merged-chr13-92580467-4	5.20049910753588	0	1.37460220084473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125472250-11	33.972085005135	0.135875131820799	0.294131182346477	0.461954189069088	0.644114172689495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.37344810316111	5.55068306972356
Merged-chr2-167001108-2	3.54558521121619	0	1.38894067277758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68119934-6	12.3953641102506	0.628320862598339	0.541487524805211	1.16036073559472	0.245901965939243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94237644528548	3.88063841692848
Merged-chr8-128351299-1	4.14684201657459	-1.8924323166274	1.29483669600525	-1.4615219992342	0.143872242765279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34106889333198	0.465515277017237
Merged-chr14-77806518-3	7.59644131818289	1.5482596900756	0.746326960363084	2.07450591001346	0.0380323504532089	0.492238223401424	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	3.22515834261027
Merged-chr10-93140979-1	5.32607158432811	-1.46336341230269	0.911322560296967	-1.60575791279197	0.108327111268447	0.957955659905887	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25678311475824	1.46460328489499
Merged-chr3-103927725-5	9.62109703609518	1.71662933185351	0.868291124994704	1.97702047439904	0.0480393159141115	0.57455867409795	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29072512625674	2.84217611280553
Merged-chr9-59733036-3	8.49513326967694	0	1.34825867565036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102655544-6	13.99608609158	-0.778880606468712	0.483711674663868	-1.61021667920246	0.107350561411345	0.953040857056886	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50257340017456	3.73294673566179
Merged-chr1-171382376-4	11.3991313463589	0.123892643523713	0.67876261265462	0.182527206439925	0.8551690053186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31988985506067	3.18707015514266
Merged-chr15-79941127-6	14.1035212387681	-0.395157340188505	0.450875185380609	-0.87642290594221	0.380800170385298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.91455037837932	4.51157830316382
Merged-chr13-9846976-3	5.38229633322845	0	1.39668148549276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45883133-1	3.8195623016212	0	1.40503556118899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142797823-2	4.11599305197497	0	1.40374584655922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122845098-2	4.20334341056362	0	1.41702047428495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110672665-2	4.71172673083382	0	1.36649476993109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4616472-3	4.58126304310445	0	1.48481858665677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54294872-3	5.62134744506396	0	1.36069791030713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101503582-3	4.43073503884379	0	1.3723063433112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94144222-3	4.67350929784192	0	1.44861792059888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135883433-3	4.6123538875546	0	1.36775758849393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40797221-2	3.32081202160037	0.640627102532269	1.10423883279508	0.580152665805724	0.561811670659788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.38647389072186
Merged-chr7-14533647-2	3.55114809311401	0	1.38842749421807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-15890716-2	7.1457459045091	0	1.36613959282724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129808585-4	10.0261926565674	1.25831597143499	0.561359948818455	2.24154924854094	0.0249905191907699	0.374334426203103	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11913156255547	4.43247064609516
Merged-chr8-123036201-4	7.85375720477272	0.334331903611825	0.712910585402974	0.468967512135962	0.639092858071272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3022060396979	2.63003866658861
Merged-chr7-113193217-3	5.86481557504993	0	1.37812027767055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47627035-2	5.65480484513172	0.0136074667009946	0.704588377798457	0.0193126471139252	0.98459169487286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81960882153758	1.8811763598916
Merged-chr5-90907811-2	6.19338009696817	0	1.3697975581608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47199250-2	6.68653201577445	-0.273917733905661	0.793656311189961	-0.345133945315655	0.729993674873944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57928534738074	1.86575916392988
Merged-chr16-91512512-6	17.946867939321	0.12293199170153	0.41572142284371	0.295707618002033	0.767453378919061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53204063422592	4.55383715142357
Merged-chr6-122572511-3	10.6349485341066	0.103764914534311	0.69858578183379	0.148535680560128	0.881920029239868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70625703709904	3.27475655262925
Merged-chr8-90834273-7	18.7582607313981	0.600967510265424	0.393703767073569	1.52644592337143	0.126898848141494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17924990378285	4.71599849038548
Merged-chr11-21453434-4	19.9275977943363	0.495044699991056	0.441953798633286	1.12012771815052	0.262659340383343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78799280066837	5.45607817560126
Merged-chrX-142383061-1	2.47934362409295	-1.90850110488816	1.34519810218862	-1.41875096447359	0.155971633160937	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr13-12469711-3	4.97200146920962	0	1.36577834494115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133144703-1	2.95048027787586	0.0771835251993574	0.940109919741952	0.0821005326914785	0.934566769529349	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9001726754443	1.610618888618
Merged-chr1-131439228-3	3.17711792445672	0	1.39057617229405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21651918-3	3.40558769431638	0	1.42677486894734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82909009-1	4.17392217496793	-0.358011810384352	1.08401685828052	-0.330264061531509	0.741200445563605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38660038197036	0.953310774576147
Merged-chr4-8709737-2	4.46264041805741	0	1.38778937259178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-3767891-1	1.39166237717899	0	1.76629386504996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47911188-2	4.90717946953719	-1.78283576548577	1.18873837407251	-1.49977135791279	0.133673639041394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19204450665405	2.11639961854063
Merged-chr18-88981076-4	5.09571514388609	0	1.36472219058227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117028016-2	2.74031060015187	0	1.4376159669296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-52082575-2	3.2376641273526	-2.15118456691098	1.28647972284567	-1.67214805543347	0.0944951305131449	0.878211796813822	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0
Merged-chr1-137910452-1	1.64681968475736	0	1.59660366860141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-48630927-1	3.69029575220002	-1.74964242512599	1.31240888986509	-1.33315343917385	0.182481455437949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85613454360125	1.47418322843784
Merged-chr11-102900952-1	1.80082953074765	0	1.52211603151004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-31519637-1	2.29438501079823	0	1.50522207920661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35209628-1	3.10512034307441	2.03736775690248	1.33456893598392	1.52661110413185	0.126857744184702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.56533893459231
Merged-chr19-36410245-1	2.86093676653633	0	1.38476361825959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-45240817-1	1.14735118834426	0	1.70248162906424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100810437-1	4.22251027648213	0.920149853165867	0.892030580226154	1.03152276789949	0.302295736976434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36759862365701	2.79932520607913
Merged-chr13-19854235-1	2.3353671212583	0	1.42968698111145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62032301-1	2.14652346838641	0	1.50326745794328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132308048-1	3.27857903377461	0	1.39967523916226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167164985-1	1.98920706089833	0	1.46685746603479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69532742-1	2.67502958104689	3.42489817578246	1.28894484888449	2.65713321927351	0.00788082938233017	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.60575736942423
Merged-chr9-95689169-1	1.87546871973155	0	1.53023974710755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29940859-1	3.92962173512444	0	1.38919651280577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110372390-3	3.75280545202119	0	1.39857485040031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-14459012-1	2.79808975974031	-1.98023693229906	1.35622808999506	-1.46010611851158	0.144260911313796	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07655486584737	1.38950137562363
Merged-chr5-93120649-1	3.33824799552288	-1.38592643584533	0.956857988227679	-1.4484139265142	0.147501322268355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37850366884776	1.18909650862134
Merged-chrY-90803612-1	2.52072103061663	0	1.42584342500586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36617043-2	3.43505284782315	0	1.39927129574966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155519494-2	4.21242842996451	0.436849541516826	1.28841557509712	0.339059500645896	0.734564906991594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr6-73697270-1	2.33308487275374	0	1.68790733648978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97604044-1	3.196274955485	-0.807033625376425	0.824213645196897	-0.979155865811506	0.32750297166132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64695715578682	2.04608241644152
Merged-chr1-9991981-1	2.50507049371558	0	1.48156422104538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109860809-2	7.74526694942559	2.10578218305335	0.763125838292928	2.75941670087317	0.00579046472189887	0.136951514484237	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	4.01322653600108
Merged-chr9-114649900-1	2.25131482867255	-1.9277780611103	1.2239729601304	-1.57501687039305	0.115252550528357	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26192334845542	0.953310774576147
Merged-chr12-99741813-1	1.87958995599211	0	1.49302672676314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81921829-2	4.0137857135186	2.4829783265238	1.18274424073573	2.09933664524061	0.0357872352401803	0.474709204592719	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.40298672487694
Merged-chr4-133204551-1	5.6289020629439	-1.46087065317404	1.07687681325285	-1.35658102690622	0.174914373671218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	0.724326877898254
Merged-chr6-148722426-1	2.51690362146901	0	1.43028470021514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13636536-1	2.48017851624464	0	1.48058144256647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53968289-1	1.52458715030542	0	1.68535876133866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14174156-1	2.45145153962099	0	1.43392699887077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125325358-4	5.24472629544087	0	1.37121513525031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122637909-4	11.229804058305	-1.97117732113551	0.592384949054784	-3.32752769002781	0.000876202808562984	0.0324043705248735	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21378350424249	2.39559827498834
Merged-chr5-135145788-4	5.10329063250619	0	1.3611817214709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55630435-6	14.9894741846144	-0.628355600180325	0.431497876033602	-1.45621945108113	0.145331964115459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.78312351964104	3.98272497733497
Merged-chr2-113491634-4	10.3902716257841	-0.958012706480767	0.630567340447464	-1.51928691042092	0.128690293071768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87932281384331	2.23050803533398
Merged-chr7-135680488-3	4.48454024751191	0	1.38512837330517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64600142-4	4.54676144596389	1.80774690494961	1.27438268951759	1.41852751125639	0.156036812470397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr14-100937619-2	5.7880925632119	0.203077885898808	0.842162450640761	0.241138613748803	0.809447686174941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06305880009184	2.34318398239672
Merged-chr14-51238309-4	8.69550543797786	-1.22686979349192	0.64198256427413	-1.91106404093561	0.0559963515254748	0.638001608168787	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92969475338069	2.47565436424304
Merged-chr11-97404441-3	4.74352101048713	0	1.36258238076084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92470904-1	3.41601041722311	0	1.37294236739784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16738119-3	4.97718289345878	0	1.37763762954812	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95533120-4	4.63892771626462	0	1.38752298717779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65586064-3	8.29798243188327	0.210801328778956	0.948020998947148	0.222359345429128	0.824034157244605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48219169541115	1.57989517605929
Merged-chr5-90589095-6	18.1100636615717	0.482896930428097	0.400404305775582	1.20602332058524	0.227808498630286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54601966489038	4.90792345559209
Merged-chr19-29563614-1	2.22007228264223	0	1.42285293732939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41288771-2	3.05121576593709	0	1.40156123254243	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60368073-2	3.49758259991862	0	1.42516275454614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46360115-1	2.24243363556311	0	1.4135367444527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6209376-1	1.33574014503297	0	1.53811128448519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41468822-2	3.75022715232056	0	1.39896551369352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73839779-2	3.86508452157696	0	1.40346600645185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28601927-2	4.00817711642619	0	1.42611883040807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132898452-4	10.1311309435054	2.13176930692533	0.75615429198566	2.81922529504832	0.00481397165780191	0.119982891034596	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	3.51174886484352
Merged-chr13-43774385-4	6.50714741357076	0	1.40347424168436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148535845-5	16.2301687851467	0.483029743401604	0.49037010001052	0.985030986577773	0.324608850588323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45516220101362	4.14969876448566
Merged-chr7-90214805-2	3.71025101402331	0	1.37161349212163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100731244-1	3.37177586924239	0	1.43524692807387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178330732-2	3.57377054509482	0	1.38298977390838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73846812-1	3.28676537147856	0	1.39285032577851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39301082-2	6.66690778016149	-0.676902175019517	0.72195266100624	-0.937599113598484	0.34845046708856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89659260029972	2.80631713887681
Merged-chr15-10872636-2	4.9805609613258	0	1.37742244363763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112103097-2	6.10342743240256	-0.558665363844089	0.7063516872928	-0.790916725895083	0.428992587365953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24228330018863	2.44306101831552
Merged-chr8-22945035-2	4.07873602080305	0	1.38723594209197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10981626-2	6.2702026889529	2.44015799784151	1.1007832827962	2.21674696189339	0.0266403876949653	0.392664000734984	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.81033887371641
Merged-chr11-60838784-2	3.20721486977215	0	1.39185143501983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20568483-1	1.97538054445348	0	1.41432784276547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84661878-3	5.46654589826706	0	1.38456790329415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-157801867-3	6.31727596230515	-2.22565980539292	0.868768517281452	-2.56185596176695	0.0104114488028816	0.206618626402439	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77661210132932	0.730937814817307
Merged-chr9-75404906-3	4.7658758350888	0	1.37125144350695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36580846-3	7.43978359184818	0	1.38230772226328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54022588-5	10.2403755959771	0.328553981769557	0.70479153794782	0.466171859449711	0.641092490315842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	2.56530010261574
Merged-chr5-65722708-3	5.63914884344884	-0.667963753182631	0.848337244191268	-0.78737996917654	0.431059469010485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67113172082159	1.338064021838
Merged-chr12-100926452-3	9.15272199566212	-0.259977545231017	0.613283508656465	-0.423910869217005	0.671630816996516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67382049396586	2.35659698994568
Merged-chr8-35859743-1	6.47363352054478	0.116267961675443	0.826555472897506	0.140665648571491	0.888134083678336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37653966732529	3.61323475280056
Merged-chr10-12090923-1	2.97009868088163	-0.366016081281897	1.08030222783232	-0.338808966465177	0.734753646121939	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.40024388691264
Merged-chr1-36869816-2	2.46000015363896	0	1.42682427768246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176862363-1	2.41612863501686	0	1.45453953079496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105998460-1	6.10205981103796	0	1.35914504090311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86191561-3	8.32814809303514	0.656552042651784	0.695090786529648	0.944555812528784	0.34488569510821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64408756083383	2.8308083484115
Merged-chr15-85383619-3	4.28663769424741	0	1.39854103533159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4338399-4	4.66673655654446	0	1.36829513523483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-48086681-2	4.45320228577474	2.80843246591187	1.26848480275285	2.21400560717562	0.0268283932160212	0.394104628005436	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.33175291456033
Merged-chr4-59352147-6	11.8220103675215	-1.10126476541984	0.536783838505972	-2.05159821593174	0.0402087257257705	0.508796342408265	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70523200673749	2.32141208096419
Merged-chr4-134249823-5	11.661695675914	0.244636507292008	0.54403779921744	0.449668217252368	0.652949691683771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08251563949621	2.85498306541325
Merged-chr14-70181309-3	5.41727280086296	0	1.37115505200819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75437771-3	3.31742028936536	0	1.39751436762565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111894872-1	2.93609096290073	0	1.45624271085521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-70643870-2	3.83819446099419	0	1.38050900547215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23900255-2	3.06032023906377	0	1.44046650450786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145289210-2	4.94039436151484	1.30617603831336	1.07179655079655	1.21867908358412	0.222966019781629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.74571508595899
Merged-chr5-32073535-3	13.3835486353119	-0.0831292606408501	0.498852027720598	-0.166641120054563	0.867652436924613	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14415082679286	4.01418577046009
Merged-chr14-47542539-3	5.70027832769453	0	1.37599695906897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53237674-2	4.53236071623165	0	1.35925721252143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89989100-5	9.35267188382833	0.212696135873367	0.659860833511554	0.322334839516797	0.747199042303097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45510301525348	3.12045409141469
Merged-chrX-13243049-3	7.2957311724337	0	1.36385859279154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13600148-3	5.30022232828203	0	1.3752622043141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165724383-3	5.46056820397852	0	1.3773453429817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69592613-3	6.0726592374308	0	1.38751359918342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79728406-4	6.49058023928238	0.292003480215957	0.757620887196085	0.385421633894819	0.699925056787741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63267172601457	2.21505521827621
Merged-chr8-11203508-1	1.50589145291888	0	1.55224154641195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87223816-3	5.22312688123815	4.42624426494187	1.10358289505992	4.01079455359043	6.05147516056053e-05	0.00386547753528684	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.64485078894682
Merged-chr7-4705282-1	2.34596815108214	0	1.42535126216901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148673317-1	3.4954078277971	2.10035302478947	1.1406097456795	1.84143001823837	0.0655585671947125	0.704566657599323	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73591966271651	3.07181222732638
Merged-chr4-111350956-1	2.049096943698	0	1.46403906481308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113023242-1	1.34854440940264	0	1.68975554113807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141497195-1	3.88097193621767	0.0358488758776484	0.90064933858125	0.0398033666844406	0.968249892134102	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81518459389541	1.39020008251549
Merged-chr14-101511152-1	1.53739632057912	0	1.48626277899684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35795618-2	7.40018285962381	0.658760133352927	0.621845733614619	1.05936263247114	0.289434660796366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91665652935043	3.45980387562505
Merged-chr1-77831990-3	4.05514432237928	0	1.43533563871334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148770533-2	4.07328493958823	0.604872844631481	1.41604893148225	0.427155327180912	0.66926619688839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.55634759613363
Merged-chr10-28425594-3	4.03537625684139	0	1.4499404042754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40940256-1	1.69298726360793	0	1.51394020939429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126075610-2	5.49981814952243	2.27244972200814	1.00699284607516	2.25666918177741	0.0240287539301292	0.364447275359345	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.86083742891534
Merged-chr2-49538258-1	1.85108709675284	0	1.52930767297527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119070621-1	1.75260695473634	0	1.63867122605789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116460153-1	10.3458421963133	0.147510736487117	0.540244615376218	0.273044343781924	0.784819128761116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41539580693535	4.44606323545482
Merged-chr11-96833176-2	4.64568817078531	-2.94012729013476	1.13591657182484	-2.58833030793051	0.00964424519018031	0.196201917774331	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83401906140125	0.465515277017237
Merged-chr12-82257029-3	5.48176392574619	0	1.36614009142527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8881146-2	4.25011769459933	0	1.35854152476174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13549974-1	1.63737705431795	0	1.65018868818703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111050595-1	2.8991687638728	3.64617778824316	1.34944616745848	2.7019809134812	0.00689277190411073	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.52022272749692
Merged-chr9-120817072-3	3.99185439040308	-3.93372637150556	1.31738362578042	-2.9860143199937	0.0028263940747521	0.080941971522857	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08650287127638	0
Merged-chr16-42165131-3	3.40204964191595	0	1.41397682193497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34398210-1	2.03701705401654	0	1.63879452899191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103327756-1	1.45645707171354	0	1.53706836396707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77356202-1	3.27558172617369	-0.567997331798032	1.13868970416395	-0.49881660448934	0.617908588880864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.815004392037195
Merged-chr11-99165665-1	1.4066089204735	0	1.49951164535934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31107891-1	3.04312820174471	0	1.44483727048924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85129794-2	2.61583315918479	0	1.45526328926754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86292804-1	1.64338611836378	0	1.48636190006043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52941079-1	2.19561236999168	0	1.40484156483149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57385410-1	2.47422542985193	0	1.46758482052538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73325743-1	2.17974484788651	-0.0376318118744657	1.36303870131175	-0.027608762567233	0.97797419281266	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr4-145239891-3	4.80805980133729	0	1.45325793017503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102878603-1	2.33938062925162	0	1.5149351122648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6373435-1	4.28679984341323	-1.05270217884364	1.04414047188582	-1.00819976544186	0.313358570491922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	0.724326877898254
Merged-chr18-11832990-2	3.70352993135224	0	1.3881591193881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102108153-1	2.83405859811535	0	1.42244599058303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35578238-1	2.0602495150321	0	1.64019367889465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116522952-1	5.8431711303886	0.0444211359890588	0.859005164559619	0.051712303745964	0.958757933386573	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81579024618537	1.83150711868652
Merged-chr7-18843058-1	1.92860497537804	0	1.53188526153919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55102658-1	1.97063733088363	-1.35810352960228	1.55333083764486	-0.874316981732894	0.38194565381811	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr11-29227086-1	5.0035272867457	-1.24229104319132	0.933786757360437	-1.33037980395326	0.183393165313889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63729084193128	2.13795322910058
Merged-chr4-132589343-1	3.13850274931763	-1.10535801845991	1.31976116410812	-0.837543980320789	0.402286866420565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.376242425970964
Merged-chr19-18618914-3	6.44931183903456	-2.44972531643924	1.14009814560308	-2.14869686955187	0.031658437012739	0.438229835012345	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	0.303163067301871
Merged-chr7-73628308-3	4.72643112764233	0	1.36447944242344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127557894-2	4.4357519730964	0	1.44733317706173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147751809-3	4.53290833139577	0	1.38645307068009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114954710-2	4.43521279442246	0	1.40362479485889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85155323-2	4.03755050412844	0	1.392385729848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114916471-3	4.01402224493622	0	1.40209120622488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85693368-2	6.1517603560678	0	1.37337276647445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115740205-3	7.85379612657988	1.80448805015662	0.864163519054486	2.08813263967794	0.0367858714937187	0.4818327400012	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15658857927843	3.33658747348461
Merged-chr13-74090433-3	3.53769550452141	0	1.44237030786363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148316359-3	11.1514102336211	-0.428488396659979	0.535285502975308	-0.800485711416221	0.423429438856256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98511742247933	2.83145705270242
Merged-chr15-8737507-3	4.65730786812622	0	1.37663730784527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173089644-3	3.93711467721458	0	1.38018728642119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34170992-2	8.49570529195577	-0.168538321111124	0.524778016474549	-0.321161168761149	0.748088257454435	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5246784221287	3.61996117862551
Merged-chr7-88998126-2	4.42502309201732	0	1.3933466369738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110860765-1	6.61804184783383	0.719485197522458	0.91392015091679	0.787251705524507	0.431134534690228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.55081194879892
Merged-chr1-167220661-3	6.42815951105957	0	1.3729594319105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88514417-4	10.1748369580774	0	1.34729393146346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7052850-8	19.3415005112385	-0.0374924995477074	0.467401834905362	-0.0802147033832221	0.936066496236306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26069810348264	4.22367863421581
Merged-chr1-91758863-1	4.46741745780394	-0.548149300997982	0.847015061522829	-0.647154136801861	0.517532190706977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51012229023221	1.76831516661334
Merged-chr6-34346773-3	4.99675577693605	0	1.38666412108884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107233686-3	4.84401897835474	0	1.36622555715108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113983917-3	4.58026958159945	0	1.40992778477863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67431185-3	5.26949013885314	0	1.39034190873756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111149700-3	3.36435776850946	0	1.42133608026985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144695247-2	6.55125813826268	0	1.38732331467606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101662101-2	5.34629208523831	0	1.38353733603687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-53713131-2	5.23288806545769	0	1.366783849822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108456161-3	5.23900450698118	0	1.39790501206668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83802206-4	6.95279926987245	0	1.3699705048903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112769942-2	8.20522223047607	-1.84663332104968	0.74379312215767	-2.48272438402332	0.0130381924078437	0.24230533370871	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93216555221975	1.95540490230258
Merged-chr11-110373247-2	2.35240617094028	0	1.49158191178803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113381947-4	4.94422077568412	0	1.37190082201579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92106881-4	5.27844294369791	0	1.38336307782276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107044581-3	8.82509822443749	2.1665873524379	0.761436778407068	2.84539362147756	0.00443565725749919	0.112825415261773	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	3.90194318250021
Merged-chr4-135286986-3	4.85743189444216	0	1.36681836908827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70913585-4	4.85914693231414	0	1.37160483384176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-42984968-2	2.41068242951218	0	1.53732532140457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61080436-2	5.899307947846	-0.288619341684106	0.908114398169816	-0.317822668890373	0.750619454301269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	0.788686275880602
Merged-chr4-119223835-3	11.0914026080584	0.829555830128165	0.651228636201648	1.27383192939215	0.202722986754824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09304857822224	3.21441196136883
Merged-chr10-14045265-2	3.42909574351601	0	1.38840258610017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17385639-2	3.33775982198814	0	1.3922318106279	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155234364-2	11.0942985278838	0.74686366296755	0.459920191076084	1.62389840119891	0.104397493855458	0.936852282339422	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48484411030374	4.1964756377442
Merged-chr9-46047278-2	1.63018521467758	0	1.84978860068569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71542886-2	2.66954186238812	0	1.47608075637424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4364319-1	2.67779042498827	0	1.41880095127744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148246670-1	1.96349409792514	0	1.48414487994739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134064948-2	9.2269091654958	-0.0854946430451489	0.534620994315683	-0.159916359353943	0.872946961466371	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45899559615188	3.35754494627102
Merged-chr18-31918688-5	14.4094561000709	-1.20804894706524	0.628934418735903	-1.92078682781155	0.054758587774283	0.627317612818177	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18703780952916	1.52633957112176
Merged-chr11-29801926-3	9.16981858126499	1.27689569662131	0.770248879303495	1.65777027520761	0.0973638431617501	0.895723892204093	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.97788092085076
Merged-chr11-11557342-3	4.62223710329751	-2.14963052152885	1.07370311766971	-2.00207160261791	0.0452770311698852	0.551841734834931	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	0.600815099743027
Merged-chr12-21269882-2	7.2563086154139	-3.04708323059369	0.872088623906809	-3.49400639689952	0.000475829616827465	0.0207691090970271	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02775762676999	0.97908007631626
Merged-chr5-36998274-3	7.09278015123361	-0.356465055484806	0.837279037155284	-0.425742243226252	0.670295676881725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74448586799323	2.43227527902726
Merged-chr10-122954486-2	7.09777365789949	-1.76830844657876	1.13493936342817	-1.5580642486815	0.119218018570173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76901627090616	0.55634759613363
Merged-chr18-50134870-2	8.99210387917218	1.87583630141124	0.554375898881579	3.38369020946912	0.000715186493420624	0.0278936678371371	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18316298393896	5.02258795271346
Merged-chr8-71627464-4	11.4069053805985	0.0180547178206224	0.511018310077248	0.0353308628371714	0.971815913701943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58170968551513	4.6939991910642
Merged-chr17-31065919-3	7.14795626320091	0.476210463150013	0.885343424093947	0.537882193723145	0.590658382246765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	1.88810051069396
Merged-chr14-106687615-3	9.3194348476536	-1.96073064545488	0.570306471139172	-3.43802980446351	0.000585963199593354	0.0241672030096321	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5527192803432	2.79234254451658
Merged-chr12-104418653-7	20.6450023143002	1.08212052796907	0.464128799329434	2.33150911887497	0.0197265297986001	0.317065178392106	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23919918438012	5.29423562053129
Merged-chr9-55307282-2	3.27370268716781	0	1.38895928971008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44962870-2	3.05173273958551	1.79102836020008	1.3256681364886	1.35103825075264	0.176683180003115	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr1-192727175-2	3.3376550982348	0	1.39058604415598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32721628-2	7.17636304583778	-2.90044484342091	0.996676349850869	-2.91011705440276	0.00361293415187034	0.0978221411069802	C57BL6J_F1_Control-BALBCJ_F1_Control	5.05719577344056	1.03321995648104
Merged-chr14-121421686-2	3.85864019140953	0	1.37622684102271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33995704-2	8.98133473153126	0.808048483537895	0.783691227622989	1.03108016914874	0.30250322650911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33788641171686	4.80323590449005
Merged-chr8-73886187-3	7.39371348059931	-2.67183069150494	1.10622624423371	-2.41526605017018	0.0157237198880436	0.274747597551294	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30182732386359	0.376242425970964
Merged-chr4-9133488-3	7.33391855502155	1.84989419699826	1.11944409301078	1.65251146399184	0.0984303300868819	0.901680875158883	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.41398715281163
Merged-chr15-59906665-1	2.35893019987259	0	1.40676098322165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-104474635-3	5.8609669263544	0	1.36834763715218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167483289-4	6.18897704037463	0	1.37842055011335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66410215-3	4.50688305070748	0	1.38583529166016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58501216-2	5.01356678574346	0	1.36655373691273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142785517-2	3.20311209019369	0	1.42430685774474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4640978-2	3.27184303735976	0	1.38341198509195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35216251-1	3.99942813569693	-0.116799224340872	1.10403600245487	-0.105792948854172	0.915746631393544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.990331813111976
Merged-chr18-24145260-4	4.52300775395506	0	1.41508860255926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98747484-3	7.13019908611722	0	1.36202309307648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156316518-3	7.93010807805479	0.799069450155024	0.698447479271028	1.14406519297488	0.252596601384275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36808708480807	3.06803127701659
Merged-chr3-116341186-3	3.69704784232537	0	1.37966214442009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127252605-3	5.20322133502191	0	1.38089739275004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117452349-3	4.83348676528839	-0.0369580874295042	1.03671323325037	-0.0356492868463063	0.971562008055545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	1.13743241080208
Merged-chr2-5605975-3	9.61035505773899	1.37902846252872	0.713332024581399	1.93322101771327	0.0532089766746981	0.615651156249193	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33578942466974	3.54663097676536
Merged-chr4-88315223-2	5.33592792678843	0	1.37533755604732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53350767-2	3.51224821018779	0	1.45147343219929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140715175-2	4.68866836622107	0	1.39875106800437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156469848-2	4.81299594080505	0.617780518168129	1.36078803396362	0.453987324071844	0.649837950338109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.601513806634888
Merged-chr13-111924668-2	4.08973437598893	0	1.36016968261163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96888984-2	8.21311512807474	-0.534624944299853	0.519655176000557	-1.02880711862529	0.303570320948767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99105263958498	2.92277051308201
Merged-chr5-148503593-2	3.86551928529654	0	1.38450682049912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56608933-3	3.39496983694968	0	1.40105244432842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162149932-2	8.91383397894198	0.534453409802157	0.825997138867381	0.647040267639434	0.517605882493169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.97656658922368
Merged-chr18-64599966-2	2.19753976734806	0	1.43536016165173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38470048-4	4.37919395271583	0	1.41526503349818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87451679-1	2.90530204511261	0	1.43879982638663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72096776-1	3.45243277108747	0.217106718790678	1.05988356986338	0.204840158828637	0.83769701000715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62739267808285	2.48865823425644
Merged-chr3-84345567-1	1.98715911813859	0	1.48902025638126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22470205-1	1.95992850293629	0	1.45930265460631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29208489-1	2.23084956780659	0	1.50288108787309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43302332-1	1.92610817724032	0	1.53138025908412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57460236-1	2.42397807881837	0	1.46510207089522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-105629787-3	11.4250129671755	0.695149251309409	0.461351562448569	1.50676687344459	0.131870423461239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86849149073607	4.54931547030915
Merged-chr7-30284952-1	3.78604548516024	-0.577857620345095	1.06096287884548	-0.544653947717669	0.585991543703338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73313460317399	2.44549708202423
Merged-chr14-29274099-1	1.38817626662571	-1.33576157906953	1.6639277693661	-0.802776180349707	0.422104112078724	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr6-39562381-2	4.1781030362366	0	1.42240626425932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87756120-1	4.35722838942691	-1.23366072666624	1.32658272407342	-0.929953861360527	0.352394973795461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr12-69509301-1	2.39214238479741	0	1.44637190322872	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55502596-1	2.63134126931813	0	1.39981268767864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84953031-4	10.6879031984946	0.0691779604358331	0.603079809830346	0.114707803690682	0.908676728310941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71802922847114	3.41435356137332
Merged-chr1-86531083-1	2.77181610109171	0	1.46059631252071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13214650-1	3.89068787364559	-0.612909334399068	0.786110170042333	-0.779673584894674	0.435583030843389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22999918374519	2.76548510545205
Merged-chr2-4389525-2	5.37379366443383	0	1.36490498475804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102202101-2	4.83790317447464	0.560442081451167	1.11660614378266	0.50191563477574	0.615726866883021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.730937814817307
Merged-chr18-5809598-2	2.2373377501262	0	1.513614138484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157445857-2	5.25711179259159	-3.34256106010072	1.18304590811608	-2.82538575821077	0.00472237244650668	0.118351057547098	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38772128942027	0.376242425970964
Merged-chr7-6398721-3	4.39084166509319	0	1.38645892088136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60046759-1	2.22561959702915	0	1.52178759758483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17528053-2	2.82862813154972	0	1.43620407421688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111096004-1	2.08464095552039	0	1.53882228124336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87027209-4	7.11312756396071	-0.455669619785714	0.809487042283534	-0.562911567429525	0.57349510302888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48586599042228	2.01719769048335
Merged-chr16-44772199-1	1.6812219332327	0	1.55706302231741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13440644-3	3.68064064908078	0	1.37280396670376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16977784-2	4.40490139876874	-3.17345261026355	1.28180274653783	-2.47577298366313	0.013294808304266	0.245555675966828	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68791476415422	0.303163067301871
Merged-chr10-48393052-1	3.17636821972099	-3.76737902379212	1.44922945816778	-2.59957386496622	0.00933395882058174	0.191393688241419	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3763371596639	0.601513806634888
Merged-chr8-77419950-2	3.65377588832759	0	1.36322018592563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78249120-2	3.07423843501595	0	1.42041442263009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72600655-3	6.41091696598913	0	1.39267741920896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91935341-1	2.19390352165606	1.28386419611374	1.44656104241019	0.88752853040659	0.374794412776022	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr10-94966964-3	5.02988928317382	0	1.37072144685751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72520755-2	4.12501072493678	0	1.38404182296463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34482153-4	7.95995136813031	0	1.3613010135983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23917696-2	6.50864905729362	0.632035415717823	0.833514088465374	0.758278023688233	0.448284560590959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91157833022862	2.17232302214082
Merged-chr10-66857453-4	7.0465456558512	0	1.38357170917627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106151419-4	4.4426794179178	0	1.37482868056413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-87215284-3	5.22004446475719	0	1.36920416974403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-63130079-2	3.76068177429864	0	1.36881173209463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8708298-2	5.52986061501048	0	1.35812741750585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137080701-2	2.69490015688859	0	1.47793922708444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85076503-3	4.28778959038879	0	1.36277621171208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66848340-2	4.26119920997755	0	1.37457061747712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88318669-3	5.34483370837243	0	1.37518605456214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75886485-4	5.56412716464482	0	1.36114382617418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25381328-4	5.69993203982853	0	1.3571071221935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99133496-2	3.75590324597881	0	1.39659476433043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73010205-6	13.0165201249955	-0.0436509407559222	0.500590811650905	-0.0871988453243181	0.930513457159931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98416238696089	4.01812459051476
Merged-chr19-34772977-2	4.0972641378807	0	1.37780581265693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74934289-4	5.63110651466062	0	1.38910443705312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113144617-1	3.09072473237664	0	1.37092178613654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84745723-4	12.1192094174677	1.24875450448428	0.596746803168724	2.09260359310414	0.036384555559814	0.478661194500466	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80689471818942	3.798589089712
Merged-chr16-39098579-1	3.46503535553329	2.73358542845962	1.04323762740757	2.62029029306826	0.00878549455235883	0.184390231031534	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84532766974248	3.94150718258619
Merged-chr14-13354379-1	3.82073550246992	0	1.37987077699584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-53320801-2	4.64358085937545	-0.0358416335675183	1.36263869670706	-0.0263031085599821	0.979015575498091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr3-81115016-1	5.13994079034297	0.829438526816589	1.00599763565045	0.824493515116763	0.409659199003029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.82070600302968
Merged-chr10-80618396-1	2.73973740777164	0	1.40843023852562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137749382-3	3.33402147769157	0	1.40461875673432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45513556-1	2.72983382594752	0	1.41777084778241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52943464-3	4.10399720182421	0	1.3888945478794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135280850-3	3.47638882924988	0	1.39751858629396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53399364-2	4.02917400807995	0	1.37222061062588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86899361-2	4.98145927106474	-1.12001706481878	1.04644580781921	-1.07030584522373	0.284481664225114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76550025052025	0.723581231604105
Merged-chr10-84515650-2	4.03890271450121	0	1.37848563245514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146612373-2	8.59490832034027	-0.877393594965338	0.593452299863258	-1.47845681138569	0.13928554883991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98814616584604	2.75131429778188
Merged-chr13-62927703-2	7.2854236754295	0.325425215946861	0.922115176951332	0.352911679669748	0.724154654411802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.993299420549897
Merged-chr8-24541023-4	4.73097634723988	0	1.38355214825625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125524333-1	4.50290286767335	-3.02246360941413	1.00655181694534	-3.00278987979638	0.00267517064327683	0.0776399364644341	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70686828879192	0.724326877898254
Merged-chr6-136717675-7	23.6873341182095	0.989528531019569	0.460488486777913	2.14886703887736	0.0316449413185991	0.438229835012345	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83999648326374	4.94957135611631
Merged-chr2-165977108-5	13.011562471735	-0.147805107142998	0.448878607791591	-0.329276344600548	0.741946822364175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78754248269248	3.53815591691672
Merged-chr10-8715862-2	4.25752333349467	0	1.36338032316597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80854897-2	2.40191504147898	0	1.50248862570813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143065370-2	2.72307989926843	0	1.41460831070191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117311677-2	3.54129598599397	0	1.41815129432752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79646495-2	4.84807104050196	0	1.38259575457117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144002831-2	2.47774912258877	0	1.49727325369342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7322507-2	4.1087901300775	0	1.3735697825559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30708377-1	3.51447743787879	0	1.39532663910304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138222318-2	2.88433713269465	0	1.38437626047614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136675567-2	6.61999357561335	0	1.34995292018297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115694199-3	4.68037148174448	0	1.38634639289895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6972376-2	2.55025746051927	-1.08585649535992	1.41214995888047	-0.768938517139336	0.441929810459004	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.600815099743027
Merged-chr10-115248125-2	2.81892948297585	0	1.40200228254351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80504924-2	3.84027595370434	0.564547871745922	1.35400516286487	0.416946616770221	0.676717454944185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.465515277017237
Merged-chr17-62884394-2	3.33041114246241	0	1.43761561339505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49839142-2	2.73598082262622	0	1.39946693862913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104065152-3	8.7657727390352	-0.680811090036112	0.829348329032949	-0.82089885058304	0.411703885838052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43227213747251	1.52554022439958
Merged-chr18-55288721-3	7.56482511479572	0.74657241807271	0.679638074874087	1.09848527572712	0.271992643728029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24517688100283	2.76675494967861
Merged-chrX-12002284-1	2.92702191973049	0	1.39407466050107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86372178-3	4.55661208218389	0	1.38345462420096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109456534-2	3.65948624384497	-2.53042723684911	1.21408130915126	-2.08423210025207	0.0371390601915495	0.484571473078478	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0
Merged-chrX-60384300-2	4.0657294638891	0	1.37098714893183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136794373-2	2.61719912502698	0	1.48417288302617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118688442-3	9.11574997915194	0.217284053587544	0.583489175907217	0.372387462457565	0.709604387305512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93277238528253	3.72696726791408
Merged-chr1-184561537-3	3.32599777009351	0	1.38935487227148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118538855-1	5.01048566421299	0.326503564176593	0.895032503963868	0.364795203225127	0.715264285995554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	1.92385917873864
Merged-chr3-8976318-3	8.07166024291925	0.713040386173731	0.966673829691445	0.737622519895184	0.460743866697609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71031093006812	3.95769471523071
Merged-chr7-111429626-1	3.29517906844896	0	1.42279975626417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-11439206-2	5.78763585625386	-1.23594038044177	1.30741367625408	-0.945332302154673	0.344489252100892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.41385117919798
Merged-chr19-10295352-2	4.39250642282511	-1.88652248714609	1.31018424824716	-1.43989098454664	0.149898244134077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr3-121847690-2	5.1764301210787	0	1.36853469337746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132765059-1	2.61041817079123	0	1.4128206496994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16264642-3	9.75183846481661	-0.484893062600709	0.509122295254892	-0.95240979843153	0.340889192085401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92239668056863	3.76629424059554
Merged-chr1-180874235-3	6.87593373207264	0	1.36704401730532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31413404-3	4.27386818512728	0	1.3996555888135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68796689-4	4.09945541256211	0	1.38703023053359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79139834-3	6.3803355730483	0	1.38432685332264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66165867-4	6.09292826672395	-0.0340411437658049	0.956093974520697	-0.0356043910671754	0.971597806978067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	1.0754104773304
Merged-chr7-74981154-2	4.10876950079237	0	1.47766527855944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55825689-2	6.92540833723493	-0.329639937169839	0.702596387778614	-0.469173970865486	0.638945289124677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33971302306348	3.11195098609714
Merged-chr13-92274014-2	2.98554062405769	0	1.46676305516467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3777468-2	8.21856779045718	-0.642807975789822	0.612742882353678	-1.04906640991187	0.29414755451535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81667693333744	3.26951683696448
Merged-chr11-115081101-3	4.54109521059568	0	1.40287136068084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34225132-3	9.26564840850209	-1.15729198057865	0.588988488073033	-1.96488047561831	0.0494280729925519	0.585245179656312	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75640980479834	2.23551309600001
Merged-chr7-29037471-2	7.7771167444492	-0.404048642098181	0.710141301970521	-0.568969360009078	0.569376933495022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37307834666163	2.72142653024563
Merged-chr4-26353955-3	6.86124371026742	0	1.36499798506752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86886137-7	17.07328783465	0.198886716884341	0.477223932627659	0.416757633652705	0.676855693863109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52853871537236	3.96652528303446
Merged-chr11-16669934-3	8.99878323780928	-0.258720083077092	0.594123580177308	-0.435465098018632	0.663224867485961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67909089243103	3.01885830089693
Merged-chr10-118716553-4	5.08947827097425	0	1.39623203865288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65818794-5	9.25916235408195	0.135189855293877	0.766396421775833	0.176396772548372	0.859982240043772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	2.13118170172995
Merged-chr10-121282636-1	2.31935670289472	0.0446780032042775	1.4454233081197	0.0309099783802418	0.975341332130038	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	1.75191520103598
Merged-chr12-24803881-1	3.64287231422096	2.18942468761609	1.3718188696863	1.59600129142177	0.110488505011707	0.967638163788419	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.948471875794396
Merged-chr11-119947036-1	1.83153137682131	0	1.50923353207438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42461220-1	2.37926066734188	0	1.46393848317027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55581075-2	5.52054422613551	-0.420126104395119	0.92642026461821	-0.453494078703317	0.650193006181492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75485430327507	0.887876939341704
Merged-chr13-102847780-1	1.27572754731911	0	1.66412338616514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108808201-2	3.17209678714555	0	1.4454034305929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95600019-1	1.53491918349457	0	1.56116880145087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139211069-1	2.84517008532395	0.0952049683011244	1.17309842982252	0.0811568457350402	0.935317218373394	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97634481356229	1.33638302378291
Merged-chr3-15231787-1	3.12908993693154	0	1.48467583234106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7880810-1	2.50076443523015	0	1.43226366379316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115178386-1	1.53657114416149	0	1.5421672792544	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67208733-1	2.10449353708998	-1.73084175510151	1.41670083035801	-1.22174118770306	0.221805515366728	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	0.601513806634888
Merged-chr2-129340420-1	4.65399147128335	0.543805257471555	0.93446485801038	0.581942972825539	0.560605093690789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	1.66541825408817
Merged-chr17-87739465-1	5.60737754879926	-0.519176874866989	0.971519713266655	-0.534396644532615	0.593067140018091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18515309243045	1.338064021838
Merged-chr16-75831601-1	1.85224850269148	0	1.4290540716397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40597720-2	4.59315807372642	0.302071949607953	1.10684400991968	0.272912846707165	0.784920211016602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95384210223154	2.15712406727239
Merged-chr19-46518665-1	1.28323287136911	0	1.65870904230137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84211083-1	2.22262606118788	0	1.49357669684913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38120099-2	1.87391620475437	0	1.74723120120669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16694208-1	3.14577736455112	-0.0430542384360944	1.34123243234553	-0.032100505026412	0.974391900666282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.55634759613363
Merged-chr18-11355246-1	2.06012165312791	0	1.48082036518934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8011615-1	2.40782338573351	0	1.58353917788498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137854768-3	4.13069474984571	0	1.3698280082122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-46012164-3	4.23633589242495	0	1.37994262748079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13537547-1	1.63403709901807	0	1.67283263458784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163929737-1	4.3936857756811	-2.96871771248683	0.959169035669171	-3.09509335902997	0.00196750956580778	0.0615019278250403	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61309561208084	0.724326877898254
Merged-chr5-103722159-1	3.10615501048783	0	1.48763102880683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150097919-1	3.14112674411299	0	1.38490197258314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16318749-1	2.75158686945602	0	1.43567131622503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120783855-1	3.33751207070981	0	1.38186732019777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44605652-1	2.37274649076856	0.825564510234078	1.26934409607159	0.650386694032817	0.515442470038441	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03300427768847	1.60310561942228
Merged-chr13-20801598-1	3.0559702050363	-0.748366566517279	1.20242606073895	-0.622380527961423	0.533691681184984	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.723581231604105
Merged-chr11-19026865-1	1.94570536722644	0	1.44760216194866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78452516-3	3.30897446250712	0	1.45640037119354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-38613517-1	1.95416436795874	0	1.47123366384992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-94565101-1	1.47407714137342	0	1.67916102108259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34306882-1	1.93212239743374	0	1.619531774526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36706204-1	1.69367227114426	0	1.62318851855808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60610357-1	1.94016547383966	0	1.60118167946603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-54163714-1	1.76013981352517	0	1.55357802203049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-115601311-1	3.54505058801725	-4.70887235866504	1.17524351029484	-4.00672057953649	6.15676267801691e-05	0.00391433289373475	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85199357491107	0.413263464506793
Merged-chr5-43180236-2	2.83354564129438	0	1.40673290929981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8906981-1	2.17737515689465	0	1.56197374599987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19176920-1	2.64647847400046	2.19180864966682	1.12229400803484	1.95297188969646	0.0508229261755405	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	3.70109254550233
Merged-chr3-52630750-1	2.23249882618872	0	1.44313675177166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62439862-1	2.17395936895465	0	1.4920334006656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-87486069-6	12.6973492625243	0.0143271356644652	0.543576480197026	0.0263571662616311	0.978972458641092	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79076160817491	3.72934108624424
Merged-chr1-43506868-2	4.57559550102379	0	1.39174873427305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69333707-3	5.25659398288129	-2.82535661744695	1.16399091585913	-2.42730126064738	0.0152116185338031	0.269771869984982	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0
Merged-chr3-84337758-2	3.38894824167943	0	1.38272520239365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132316152-3	5.43210984297418	0	1.3588798222312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80584224-3	6.0689897510447	-0.377714572415229	0.829909687473772	-0.455127320618445	0.649017643931686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.20027794713453
Merged-chr3-65360706-3	4.65699434788938	0	1.38550566717243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99468173-2	4.37112814968897	0	1.39101878412754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11481872-4	5.4731747023823	0	1.37942950157342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40133244-2	3.30847051778831	0	1.40077206336059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156386083-2	6.91398791979192	0.354196150144679	0.897096244696839	0.394825139708811	0.692971940304567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	2.18465264107678
Merged-chr11-11513535-3	4.00947305626014	0	1.3842231446578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28251799-2	4.56764286874621	0	1.38067376297424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-42781639-2	2.99501192963488	0	1.44282867364685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66861905-2	3.88377817147937	0	1.41688930260425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20420071-2	2.70879475545562	0	1.41946165629797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58978107-1	2.56072601751796	3.03924159030838	1.38984030019282	2.18675598188276	0.0287603424285737	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.53933126993545
Merged-chr10-50740284-2	4.23660609920118	0	1.39122114164497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148579228-1	2.2147216325233	0	1.42857066603574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33539721-1	2.70222310256706	0	1.43895877917851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21949603-1	5.38709657566712	-0.834262189830408	1.18309367378397	-0.705153115359098	0.480714954842153	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83409279611901	2.27789912699525
Merged-chr14-60694859-1	4.76865007228812	-1.36971342553045	0.763402185984294	-1.79422256142011	0.072777652448213	0.750056485711688	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57846697909902	1.8989244266574
Merged-chr9-66305397-3	3.0972977460918	0	1.39536393237985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109551352-2	8.53089145904896	0.219380983476466	0.710571294333891	0.308738877049797	0.75752016795499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23426860406508	2.10862051526317
Merged-chr14-65347206-2	8.69698039350813	-0.677839068923749	0.703684759480987	-0.963270924644865	0.335411580441491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73490392254983	2.8017580499113
Merged-chr13-107027407-2	4.63734019517549	0	1.39210573060761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106232049-2	8.19213980323077	0.499282365559798	0.685200594785257	0.728665983887935	0.466206005310005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67157150249193	3.45510288457793
Merged-chr2-128766738-2	11.7328019757985	-0.165056454512398	0.516278819941453	-0.319704098128828	0.749192652854141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38667354628115	4.28649232707034
Merged-chr4-132380984-4	5.25767883286361	0	1.38103771799936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81750272-3	5.25827126478069	0	1.40469137384481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109368360-4	5.08386873380727	0	1.38450643516612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131056410-3	10.3471278562987	1.37733288113407	0.593688741503897	2.31995789181565	0.0203431553414311	0.324101284057695	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82713210315241	4.47773847156829
Merged-chr7-55910397-6	21.2118652201772	0.387293681450841	0.349556351514943	1.10795778641226	0.267880047241352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89975360595577	5.35220267121905
Merged-chr5-99452136-4	6.13465148149675	0	1.37057104155545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25571555-2	3.28094346922976	0	1.42834484856231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22122313-2	4.06238702714405	0	1.3785709802912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136224959-1	2.62176602916793	0	1.54305651035531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21024376-2	3.19010832440852	0	1.39723080278799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25515502-1	4.26252180318625	-0.746678694261506	1.18389822765632	-0.630695001325963	0.528239968096663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	1.02674429890598
Merged-chr2-145823803-1	1.91922472744582	0	1.45834497723415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122765715-2	2.27910547209529	0	1.51873231290957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52179948-1	3.11161600408579	0	1.39600332483131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18619860-3	4.76589728975731	0	1.370088186964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46523317-4	6.00810548759892	0	1.35577008544146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122368096-2	3.25923130056587	0	1.45214716548386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-87125738-3	10.1363422593116	0.127550092779641	0.507766271300615	0.251198435163739	0.801660694344058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60233872278206	3.46899340024855
Merged-chr18-38403552-3	5.62451921930722	0	1.37466759172559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60464126-2	6.72730789403101	1.24455965678169	1.00722419135773	1.2356332060532	0.216594935816922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.4277097602107
Merged-chrX-85292299-2	4.2840810451183	-2.3033301407195	1.31140489589147	-1.75638366757335	0.0790229196877554	0.789488493164252	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0
Merged-chr12-44919829-2	4.38456342630743	0	1.38539467249409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55874080-5	10.5088819345047	0	1.35084573786015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81120899-4	12.5233636037456	-0.487954353814375	0.625979929095758	-0.779504791022991	0.435682416447191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98076479089294	3.76404834696219
Merged-chr18-38381414-1	3.19205223642231	0	1.42985314192179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161922150-3	7.77370203426514	-1.49209653780619	0.789835796439188	-1.88912245372139	0.0588754224015944	0.657978841761569	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70170860213239	1.20194974038739
Merged-chr12-116462028-4	10.5466026915931	0.224632505995561	0.622525935038036	0.360840397728709	0.718218761450641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59917191111941	3.0032038443639
Merged-chr4-129745985-2	7.7804438771213	-0.465933744915111	0.728328790920705	-0.639729955376483	0.52234817718903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40940878538626	1.71947978671142
Merged-chr2-143942803-2	2.22660292883563	0	1.5026650437727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122536136-1	4.75197768943178	-0.12049761879574	0.668602248776062	-0.180223173069372	0.856977366806871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05424768700037	2.53692024245732
Merged-chr5-142936474-2	3.92923420862493	0	1.39323619078494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125107468-3	5.67143071921077	0	1.37138552284422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57629446-3	3.89936240548876	0	1.38725697869688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181548428-2	2.92432648606325	0	1.45891211845947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58134020-2	7.12748097728542	0.341236468604632	0.609656345415817	0.559719374973275	0.575670864703624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94005514812924	3.62746929417777
Merged-chr5-99247629-4	10.0434504428582	0	1.36131141489406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57331461-4	4.5709024240039	0	1.36773989075165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62626625-3	4.7370343596884	0	1.36522628852293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4163117-3	8.40562347849619	2.71135723751304	1.09167764341975	2.48366104578229	0.0130039519459644	0.241995150827261	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.53561582454892
Merged-chr4-53079035-2	4.20941538673858	0	1.42315513028596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117217014-3	4.77370764294515	0	1.37068838470246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-33790264-6	14.060623962083	-0.266061294267669	0.416789764077909	-0.638358513569288	0.523240330252446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59702873090276	4.38334856868335
Merged-chr3-123895187-1	1.8678046805725	0.349519005099044	2.00347761656796	0.174456156738993	0.861506984190337	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	1.80341302213202
Merged-chr4-141656923-1	2.67429868785381	0.899708475972646	1.31507455486423	0.684150166729926	0.493880346256475	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.95685815637649	2.17800895049633
Merged-chr9-100446575-2	4.24030143746229	0	1.37556995865767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159975033-1	1.99828943187103	0	1.45084507339278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14460486-1	2.68946408436575	0	1.45634435672661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-28412387-1	2.13216939910271	0	1.42475489500327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54774363-2	4.3689526906024	-1.84359092421594	1.33012226005214	-1.38603117892612	0.165737383141538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr16-24425995-1	1.91867498833947	0	1.54424220306152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25102956-1	2.73459439014449	-0.619875309606369	1.21927847047712	-0.508395189955094	0.611176225383518	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18950583898258	2.38080482428767
Merged-chr15-78536569-1	4.08397457299769	0.989806642709446	1.26576506443381	0.781982905455046	0.434224619974271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68282958247602	3.03254184781998
Merged-chr5-110598911-1	2.34931630913174	-1.91916452432565	1.3899217317444	-1.38077165101738	0.167349182606029	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chrX-143366511-2	4.0159652543279	-2.3007897280946	1.33407759607634	-1.72462961289618	0.0845942432108355	0.82086013329129	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	0
Merged-chr9-45308233-1	1.14319819630134	0	1.71632018794754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17528489-1	1.9688799531276	0	1.47352551174058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21564957-1	4.1651005369599	0.0810538531053453	1.05653268214901	0.0767168441400982	0.938848804345726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10161003115576	3.3097089003394
Merged-chr14-49860350-1	2.57346061270404	-0.364891580108162	1.44540725123962	-0.252448975743841	0.800694048488922	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.55634759613363
Merged-chr9-43246354-1	1.53408176099582	0	1.64257615944904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113042824-1	1.60037012703944	0	1.45872434927562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86676134-1	2.55961419669215	1.16185179276905	1.48808631697361	0.780769085446579	0.434938319540168	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr9-110862537-1	3.95402374565428	0.377051326840218	1.08507592182727	0.347488428464309	0.728224410311871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65175977651716	1.91539609430116
Merged-chr1-36965975-1	1.70733616048159	0	1.70848069854203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67294664-1	2.95327550392728	-2.54530592337752	1.00933303754609	-2.52177014790452	0.0116765978086535	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15813062208874	0.879366456215217
Merged-chr10-111336482-1	2.22799105570033	0	1.43790608137627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105744667-1	2.76224294144162	0.0814919662010128	1.26870469977234	0.0642324145371543	0.948785167608922	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.25298535761957
Merged-chr6-136778209-2	3.32102435601047	2.46486587360062	1.51433171743251	1.62769216627101	0.103590174995301	0.931985819690424	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.47629065811305
Merged-chr1-143998823-3	7.63271428296008	0	1.3676154338278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-123919491-1	5.69768478262361	-2.43699332080279	1.14646858917162	-2.12565206218484	0.0335322412254191	0.454802053600019	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84263888870065	0.303163067301871
Merged-chr14-104849473-3	4.44017820435054	0	1.42335804007167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174932890-1	3.26942423774989	0	1.40806440699336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19953044-1	2.13083595355516	0	1.52852276424502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18615996-1	1.92415170260263	0	1.42072274838225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60722458-2	6.26112440514021	0.476078498434033	0.947253692952306	0.502588168276483	0.615253849531197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	1.6776376524744
Merged-chr16-94250299-3	7.52933179116012	0	1.37053988363681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123977163-1	0.905529239255356	0	1.7945156328268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113777334-2	3.23316865761054	0	1.38645037685637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-3888796-1	3.27557100207868	0	1.4440103316742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46411726-1	2.59516907998974	0	1.45909981057747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108599475-2	5.72810093187636	1.35277681439068	0.964056010228043	1.40321392122299	0.160553057525781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.54363658659852
Merged-chr3-126669011-1	2.92505802187046	-0.0337081881588672	1.13730937284595	-0.0296385389619338	0.976355329157422	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	1.2636608194585
Merged-chr7-122317658-1	3.01953966274991	0	1.423954450697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90741788-1	3.06753499085925	1.80283951556903	0.958179046332754	1.88152675898002	0.0599002987378926	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77796484182175	3.67273445277784
Merged-chr18-9744627-1	1.00081112282876	0	1.83456044903874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70729463-1	6.28690263668638	0.470846699263632	0.854446655383105	0.551054529030277	0.581596294918795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09570310142766	4.01728927202019
Merged-chr5-36727220-1	1.88229508268009	0	1.48141426427286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124707029-2	4.21492426890804	0	1.37576872108148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115359019-4	5.23986093090943	1.80684952647497	1.27631515399981	1.41567662251171	0.156870205970478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr7-125542684-6	13.2769992008943	0.231294068181651	0.586895816079717	0.394097319907005	0.69350918963561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00140563128196	2.84199678911687
Merged-chr18-69475865-3	6.97499623407468	-1.93480335135551	1.00931273045182	-1.91695130060371	0.0552441188171343	0.631951281365252	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18911587802649	0.859510663435501
Merged-chr9-14066925-4	5.07569409073767	0	1.3973338885425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76265179-4	4.77883460404508	0	1.36553728209885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136431521-2	7.53662742576621	-0.856731511853225	0.609047657269848	-1.40667401249626	0.15952407515283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28213118704209	3.11223374861158
Merged-chr5-136186920-3	3.64059260865366	0	1.39760635750234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34662435-3	3.7799373973513	0	1.4051901795895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60379750-4	6.91329719772812	0	1.3595582878063	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99204932-4	10.5253121615379	0.592831168701318	0.768150780958124	0.771764064292003	0.440254179167433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	1.71762629844815
Merged-chr1-185208531-4	7.41666844606683	-0.641824771567141	1.33509779046376	-0.480732404885636	0.630706697089064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.376242425970964
Merged-chr2-6220342-4	3.88189061040995	0	1.37209762629823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99101186-2	3.27347085696597	0	1.39863277201566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25041398-2	2.68752895798757	0	1.4282601849842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35067983-2	4.29827837384001	0	1.39060245389932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63650308-2	3.6992451356172	0.570893869495217	1.35290103732508	0.421977553231811	0.673041401658368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.465515277017237
Merged-chr9-96536416-4	9.58943398333004	-0.968897892553433	0.728564735571199	-1.32987206935539	0.183560425402519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29879690560729	1.71450075940727
Merged-chr16-30764364-4	5.2549848221709	0	1.37274347939775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79342895-4	7.46962749227422	0	1.35157592812265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40896778-1	4.22703230683522	0.125595423756821	1.16794513759309	0.107535379628918	0.914364259156597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.09662457429765	2.16077569929116
Merged-chr12-26340889-3	6.4699065585351	-0.394905477837806	0.829410294848904	-0.476128015640011	0.633983179022621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	1.19182800327718
Merged-chr12-117427601-3	10.7428487842627	-0.0319819954161478	0.515290700921459	-0.0620659277548704	0.950510330377941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8217545504316	4.00825892673338
Merged-chr13-102148264-1	5.12281212166959	-1.12976894533855	0.845729294895186	-1.33585173430532	0.18159773945301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05043424441622	1.25163494309627
Merged-chr4-33076345-3	5.42343511914224	0	1.4378923386473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74402531-2	3.73170628056426	0	1.41998613775864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100169405-2	3.3757093915897	0	1.41154402377267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88727340-4	4.47976811131411	0	1.38652291387412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4630086-3	5.52178270041861	0	1.36374367307001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27397760-2	4.61670052561178	0	1.39933709992985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19583210-3	6.4330575314243	0	1.35962355635583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21325665-2	5.58781639002807	-0.477418293422169	0.927109594404408	-0.514953459983197	0.606585542130028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01628926503709	1.35339221635894
Merged-chr7-28807780-3	4.69670345893658	0	1.36909990122507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74017971-3	5.42324063014069	0	1.40848024080536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25406209-3	4.89001470256033	0	1.37713058183287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-51987111-3	6.43800885056885	1.90169559364258	0.94791768256804	2.00618221245818	0.0448368109433819	0.548486988590891	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.73414606565242
Merged-chr2-160374430-1	2.19700505903699	0	1.50593576038248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128456557-2	3.87896320484491	0	1.40064511552724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97754497-4	4.69722220033982	0	1.39143826214434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47313954-2	5.12014611228549	-0.969394011813477	0.771017194342653	-1.25729233916755	0.20864779700676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52488534868087	2.68076355596708
Merged-chrX-20387181-1	3.00134610625845	0	1.44874744614177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29099176-1	2.03311585239672	0	1.48627297870004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113693659-1	3.0219520012733	0	1.40461394963771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126597788-4	7.26152943186622	-0.77395729220188	0.909701165440665	-0.85078190685506	0.394890514142367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65880184244346	1.06633037676026
Merged-chr7-130770942-2	3.26037721303924	0	1.39790053074767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3348144-4	4.28282601415028	0	1.48632123675765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106957845-1	2.31986788079256	0	1.45533261572308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24057147-1	4.93983109340997	0.545798188111892	0.976519573269252	0.558921913141623	0.576215013543001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0411132438942	1.94965252358293
Merged-chr2-109431042-1	1.49185799514709	0	1.48109011612578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104306953-2	3.16764831443606	0	1.39944917555116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72300818-2	5.8043798023719	0.104354268416711	0.748585386042985	0.139401957829188	0.889132525342796	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17623743947486	2.19776446004195
Merged-chr3-51652434-4	3.90101639121845	0	1.39096784716726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107519566-2	3.48436996611399	0	1.45982481756584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39909059-1	2.47292501976903	0	1.47160743474343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69689847-2	3.22362425920409	0	1.43504235442856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90964955-4	6.21508455997856	0	1.37134555781462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73451855-3	5.87364792349453	0	1.36438760124897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93815462-5	16.6279496335417	0.178417625380576	0.492067309307864	0.362587845210721	0.716912791364826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.786302615205	5.16958173544884
Merged-chr1-186676274-4	5.00855994569317	0	1.37646180410147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130761131-2	5.03017146249883	0	1.38053276893633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37249782-3	8.15451424480347	0.00328480407474258	0.678848671270421	0.00483878692521455	0.996139221685316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99166718054872	3.14327507880701
Merged-chr11-20143908-5	11.7906383273523	0.126407964947036	0.48437688411686	0.260970267351856	0.794115436146672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53607108064355	3.79301009049672
Merged-chr16-91561224-3	4.7754756401028	-0.0362532411278899	1.06034528338837	-0.0341900338463727	0.9727256137347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.33924509967612	1.31782934624288
Merged-chr2-158107455-3	3.96561860654293	0	1.38994687073192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100991633-2	6.92793543946257	-0.890320238217567	0.82075168984421	-1.08476199224952	0.278027083293398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67961625246076	2.1333309659094
Merged-chrX-102481297-2	4.05054708554287	0	1.41144510042577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38239398-2	3.88071117434202	0	1.41321074934478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75694621-2	3.96087499402066	0	1.42490991106473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21328764-2	5.12198182384388	0	1.41697319000885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32015545-1	3.93680576592426	-1.3276590838196	1.01886578517466	-1.3030755406042	0.192548973153191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	1.02186287315087
Merged-chr9-70791637-3	4.31717003992068	0	1.37465069155173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86677083-3	3.95361426030323	0	1.3816494400391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71636436-3	8.91590847904562	-0.142044752003485	0.477297728281027	-0.297601986322154	0.766006958369668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18729427996723	4.10227135181605
Merged-chr10-72620724-1	2.76398974253118	0	1.4123214518465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45919181-1	5.98967610406378	0	1.40002791524411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30777932-3	5.22982441248553	0	1.39680178108348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41514230-1	2.91931086848683	0	1.43326468586404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34065422-5	13.3628448412837	0.116217510146226	0.471894803416343	0.246278427532693	0.805466708084486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6739580453098	3.79463355116038
Merged-chr12-17257076-5	13.7940411542923	0.495785616060841	0.547398219333829	0.905712876932996	0.365087845009343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22224112272346	4.64105556411013
Merged-chr7-46993265-2	4.51467180435296	0	1.43359723420464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121057006-3	5.00526399280695	0	1.36070101377568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82808181-4	4.34926434186062	0	1.39085436380269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93055751-2	3.28013082673508	0	1.43383487510841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91091628-2	3.08189724575041	0	1.38728992363929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-81261-1	3.02434919425004	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10832145-4	9.17642276391539	0	1.36442708581507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51580499-4	5.42742040840283	1.26936592539354	1.32643767858556	0.956973664037592	0.338580547934176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chrX-112303792-1	2.8237969235617	-1.27507283674528	1.40854394136609	-0.905241788558365	0.365337307796392	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr6-134538963-5	12.6479440771546	0.119806806535264	0.58004026782847	0.206549119397851	0.836362000090576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52853922112505	3.08017822154978
Merged-chr14-27367688-3	8.76185093573075	1.73903096123923	0.744952515878017	2.3344185356426	0.0195738171531429	0.315450082012362	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0411132438942	3.38818924230735
Merged-chr9-72468717-3	15.8213385551615	-0.035896483809054	0.516898923392877	-0.0694458475042524	0.944634735950942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26808853872428	4.18957171353549
Merged-chr3-14874625-7	16.5271981006228	-0.515467435998592	0.459603464514475	-1.12154819490565	0.262054588874907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.21059244966214	4.66637742779666
Merged-chr3-51859377-3	5.14973589135121	0	1.40583173818861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55017734-2	5.56269771676804	0.260366349504778	0.87103713042722	0.298915327957461	0.765004651488381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.92460482503279
Merged-chr17-85023715-2	3.7237847158307	0	1.37826450744794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60910953-2	3.67713312212453	0	1.40161984140104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47644467-2	3.72681077335677	-0.753710269501637	0.924429451234447	-0.81532481304567	0.414886409218455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72597142609953	1.30139522650344
Merged-chr13-21172796-2	3.83404691479609	0	1.3868124764387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134700082-2	8.63643493917762	0.551554286513836	0.675145243616801	0.816941675481738	0.413961759801297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30039026721351	3.22710147738838
Merged-chr2-153156296-4	5.72798755993976	0	1.36810530920808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10249576-2	4.25164943638702	0	1.37320202125923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29557330-4	4.91838932606661	0	1.42664812284971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144580096-3	5.68604457295712	0	1.36875776657884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72253761-3	6.43088987258285	0	1.36814511391109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3562893-4	6.29972952008904	0	1.34952039330155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11098582-4	4.24175125231094	0	1.39059004226366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34294153-4	12.0622187617141	-0.208588817548284	0.628068826330201	-0.332111400540393	0.739805141868414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63134540683492	3.69973528261239
Merged-chr17-80520726-2	2.45340641042562	0	1.45871870481737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38603592-1	1.93127164240512	0	1.51901818135429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100275892-1	1.78137158503385	0	1.60993766143629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-19973073-1	2.08607645407565	0	1.45175858607988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167641574-3	3.80329191499282	0	1.39338737344789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24550698-5	11.1711194586135	-0.433050314116018	0.495406582647981	-0.874131126399926	0.382046848215141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1250163203058	3.732621955965
Merged-chr10-81140803-2	3.19200138639587	0	1.40368613662631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99682696-1	2.7574311716903	0	1.43017287413344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35824690-4	4.43755830815452	0	1.37946674154713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42464401-1	2.22644803055532	0	1.40711013633596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-65104623-1	1.94661945137008	0	1.47280422837996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12318343-1	1.7583196948639	0	1.4738897433293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121388539-1	6.39210030713096	-0.729948963503639	0.879087448444398	-0.830348521976205	0.406341761678997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00246148809999	2.8687433385428
Merged-chr6-71437120-1	3.12707723446258	0	1.40343466144738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67605086-1	1.97824561162802	0	1.60790229164403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-158234296-1	2.23353464505501	0	1.44517313001648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91185135-1	1.20486478077072	0	1.5795151077883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118622648-1	2.37520378541935	-0.0273201525030746	1.52700481465531	-0.0178913335707076	0.985725542717681	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr3-98043154-1	2.18533732310259	0	1.4304685147827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140770629-1	5.88206657483448	-0.180622694087737	0.79143095134454	-0.228222934396086	0.819472932798097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83880716876101	1.6794096906117
Merged-chr2-167268960-2	1.6586912602677	0	1.6874601162409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89043157-3	4.94369532581405	0	1.36840834040974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73593371-4	4.76459850399787	0	1.37783216260801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29441974-3	3.91407342045743	0	1.39617020705627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-71877436-1	7.27797178675963	-0.504214418450186	0.589848050150667	-0.854820861612399	0.3926503272498	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68903049000339	3.20187948698427
Merged-chr1-195169313-1	1.27859309686216	0	2.04843633477953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34557522-1	6.18625322807191	-0.507521969069137	0.793591512845815	-0.639525449622269	0.522481163069469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1409497388162	3.35060712847384
Merged-chr5-99204194-1	2.28205549369051	0	1.45824152695671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53380538-1	2.46153730181632	0	1.53894846806844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105562477-1	2.70079243278751	0	1.40881799465929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29237241-1	1.90230207526149	0	1.49630900103196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122233937-1	1.74563815613929	0	1.4289749446508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129024945-3	5.71087280605389	0	1.36947109512896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122725952-1	4.53562553131653	0.583027576474877	0.917571817457041	0.635402663184098	0.525165831605379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	2.00487246391424
Merged-chr14-17933762-1	3.04384232293713	-1.2730602096379	1.5193760037195	-0.837883582813857	0.402096089984323	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0
Merged-chr13-58589648-1	2.73903666186428	0	1.41601695580343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15990641-2	4.9012645549138	1.99481072859586	1.19265393598591	1.67258134854253	0.0944097411757266	0.877920224432472	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.54998568242928
Merged-chr5-89051812-1	1.7583544997413	0	1.49404047344983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72962236-2	4.28407443548109	0	1.40009161421767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21711675-3	6.15031341501182	0	1.37275433678033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98383045-2	3.37729755910211	0	1.40021128346318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52479397-4	7.1609234147137	0.163642866205282	0.924160427691733	0.177071925286837	0.859451893813251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84532766974248	1.99385734745794
Merged-chr15-59685617-2	4.32765256488699	0	1.41964077094329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143998146-2	4.90391437049243	0	1.40415580990229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103616295-2	4.02390281407267	0	1.38113792933581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32328269-1	3.03920293963981	0	1.37971824523027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95881592-2	7.21845152955351	-1.15585611591717	0.612164444156599	-1.8881464399809	0.0590062938297799	0.659034955063285	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22320530864079	2.55116633021782
Merged-chr11-104003676-3	6.85206040000801	0	1.34685473146673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86205488-4	5.24223041909874	0	1.38802634574562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62844644-3	9.32365076831949	-0.129211952631393	0.707464368094405	-0.182640933534833	0.855079764204872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79716620684881	2.76548510545205
Merged-chr12-8522927-3	6.27177298157483	0	1.377798165352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63236025-2	3.5434454200832	0	1.38341568207622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40965025-2	6.60505003339189	3.01182829736823	0.819960839093341	3.67313675699258	0.000239591172798554	0.012075381710438	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	3.9919189330192
Merged-chr5-151233718-2	4.86529647760083	0	1.39112121187629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139240494-2	7.00781794598468	-2.64240593651875	1.14463133028196	-2.30852141349986	0.0209701532327155	0.330986225196626	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75912454751757	0.55634759613363
Merged-chr11-20661864-1	6.63406347175926	-1.14656113719743	0.843654120328463	-1.359041708646	0.174133372440633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04403056204475	1.28067447403188
Merged-chr16-33668429-2	4.57366833508184	0	1.36734064586774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88514612-4	4.79143997929177	0	1.36360208899034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17686819-1	2.5018952422501	0	1.47920381576373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18431036-1	4.14984193295108	0	1.38723903210871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111662654-3	3.63814902948936	0	1.4000743866177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86415999-2	4.55878635696439	0	1.37944764189801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102849282-2	4.38253638296405	0	1.38649210217556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120664730-3	5.16239677695686	0	1.37968595352776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-49140876-5	15.3285479296927	-0.930366718877963	0.525867350262338	-1.76920418887736	0.0768598054124061	0.775430987827206	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59642906564162	3.59157702648019
Merged-chr1-128704998-4	13.2813056440391	-0.301159394033848	0.531663826287989	-0.566447027507035	0.571089933531342	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49655603032405	4.13679608997205
Merged-chr6-120056348-3	3.82027633504261	0	1.38343167145007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45454317-3	4.0724673293928	0	1.43421502297216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117820317-4	11.9499342311612	-0.755699273327664	0.523792291183063	-1.44274607711542	0.14909201418004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33842363980977	3.50878162666786
Merged-chr3-97998568-2	4.02523180106943	0	1.39520914474009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11918116-2	7.15923370589921	-1.20181548226415	0.896858415147817	-1.34002810473275	0.180236207968189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31590445616606	1.47792296811651
Merged-chr1-55398136-2	2.26654206642653	0	1.44535371636564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155256136-2	3.6622108816672	0	1.39277246235074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91482848-2	3.65728967319117	0	1.39345003527775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81850971-2	2.87441135547596	0	1.44890450240253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172003656-1	4.58161566871046	-3.44164998241788	1.2213140193335	-2.81798941790258	0.00483254025090643	0.12028024519186	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54053031365018	0.413263464506793
Merged-chr3-152404974-1	2.59894546810842	0	1.57760619632942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92225449-2	4.3382364203144	0	1.3762484941582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143919468-2	4.13935682775477	0	1.41672079436816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101561431-1	2.11780019426008	0	1.48159584962397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10990947-2	3.06999763458256	0	1.40221750543417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121996187-1	5.9980416708913	1.2690549866748	0.815990063418138	1.55523338281694	0.119890496476452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72768402745283	4.50182571868196
Merged-chr2-6642534-1	3.87859528883572	0	1.46010757570121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153969420-2	3.62870311479111	0	1.41431467658806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93257473-4	10.9524757254531	-0.245652406739072	0.628920866144117	-0.390593507010118	0.696097725797515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37958553827637	2.80043265862538
Merged-chr1-172195360-3	7.99602242975437	3.24023295635486	1.04033770362455	3.11459725535838	0.00184196222160427	0.0585241537914246	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.19732500011991
Merged-chr3-65938368-3	4.48254985109864	0	1.37923391753025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167230757-4	6.31358007205563	0	1.36620747425649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136511861-3	10.540307642503	0.998814478308248	0.619291786292347	1.61283340166366	0.106780707250659	0.949687903376728	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62798987719808	3.31938747233731
Merged-chr8-112046072-4	12.0406913793787	-0.919262374109579	0.551238844915556	-1.66762988963595	0.0953892209875019	0.883349687165182	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90183001877929	2.9185631057194
Merged-chr15-100443427-2	9.31648695141261	1.53171904030944	0.751266367697472	2.03884947625693	0.0414650526568419	0.52051654422657	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	2.98852461179527
Merged-chr7-30683605-5	11.4776258412605	-1.28574383001597	0.75972890172998	-1.69237188040128	0.0905750903626133	0.855232123852926	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71757237205096	1.44790810950236
Merged-chr8-108809037-2	3.29026750112729	-1.15235837592245	1.25527102123061	-0.918015596976599	0.35861070037093	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.601513806634888
Merged-chr8-39338101-1	1.67127925628983	-2.54919175203407	1.54796885961577	-1.64679782554981	0.099599608469219	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	0
Merged-chr10-68104753-1	3.24783080636732	0	1.37837122259271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50042807-1	3.55469864884419	0	1.38027857001054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86706675-1	5.62358861476532	0.00630479160754985	0.859400820266543	0.00733626435868937	0.994146560440389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99842317083879	2.6522423130697
Merged-chr18-53148714-2	10.7134914593423	1.16272006314031	0.724063132779381	1.60582690997829	0.10831194627454	0.957955659905887	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10382477697739	4.65170907503724
Merged-chr13-44418837-4	5.32118362254998	0	1.36301080319074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121589561-1	8.37544198204231	0.223594404737191	0.501300447563816	0.446028735509411	0.655576489044132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64536747098134	3.90421954599648
Merged-chrX-101636622-3	3.33943015870797	0	1.39686103463845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58861388-1	2.88540645008146	0	1.41756431504733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51521675-4	7.38529008864304	0	1.37011580707496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-111024385-2	4.21348774197035	0	1.37525076784626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192745686-8	22.1956993308195	0.476593892206425	0.389687860005373	1.22301447163341	0.221324230412305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31837701610968	4.93002267857016
Merged-chr1-182292253-2	3.58052248089611	0	1.43763853218107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33158456-4	6.68023715727637	0	1.3782470185666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93631517-3	4.68104947358238	0	1.39016521325439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58532410-4	4.70947814489317	0	1.37299746195798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83488706-4	4.61035907582041	0	1.39271215552217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-34982577-1	4.6100368102942	-1.14744788306772	0.932432125711657	-1.23059668519245	0.218473745635825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20722616279249	1.14046671619316
Merged-chr19-21065700-2	9.94884305040049	-1.34853981394334	0.647043042358428	-2.08415781588192	0.0371458144615982	0.484571473078478	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75739287652729	3.30459792214267
Merged-chr7-17091522-2	3.65418370551052	0	1.42812333416793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154752223-2	3.28294828589482	0	1.40803356421767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-81107604-3	5.56810820762277	0	1.36837030359629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173645522-2	5.79262002341973	-2.11395638631612	1.31914355527431	-1.60252186190344	0.109040257111913	0.960677231887325	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	0
Merged-chr9-104415021-4	12.6091499575465	0.170715835186319	0.504133854434673	0.33863195991421	0.734887003104659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4690961160771	3.66198192088779
Merged-chr2-154593252-3	5.41382264131111	0	1.37331103273417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48355548-2	4.07254267949709	0	1.38292653225527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89165459-2	7.33994136627623	-0.697152636581378	0.616887742990728	-1.1301126412425	0.258428763736061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3632336662134	2.38324585574579
Merged-chr1-80371663-1	2.0421602336273	0	1.42976712393746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56144408-1	1.06537769436676	0	1.86856733015072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47841361-1	1.71569818207787	0	1.53114142100108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84527636-1	3.70270252312648	1.54434872697215	1.08653085426712	1.42135745239728	0.155212869058422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.84501803900835
Merged-chr13-98957489-1	3.02310429935635	-1.33979424018971	1.18332699964528	-1.1322265448108	0.257539202876308	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	0.662147012823607
Merged-chr3-68632765-1	2.08643664775671	0	1.64677234206114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20117888-1	3.73951908444687	0	1.3843143337338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88054445-1	6.94616223220771	0.234228519880934	0.736466402080192	0.318043727750977	0.750451767679669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63217254863404	2.65186312948484
Merged-chr2-5655307-1	1.8494988246586	0	1.46940020517541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52302746-1	2.46446251830062	0	1.4140471984894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71658643-1	4.7068600683775	-0.189626164203117	1.24498532944662	-0.152311966830487	0.878940886875851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82133949013376	3.31162568249772
Merged-chr12-34225886-1	2.24084875775224	0.789696192909579	1.34670724579328	0.586390394331329	0.557613197874684	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.06702908365212
Merged-chrX-13616961-1	2.3025700655036	0	1.4365346366915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106355843-2	2.88218445329278	0	1.3869110807211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8994179-1	4.47885671308897	-0.852624248736428	0.916075447796254	-0.930735837083652	0.351990227042513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7338319598883	2.97351951495222
Merged-chr3-86962055-1	2.79316457644873	-0.0898974538329852	1.10894996136627	-0.081065383439148	0.935389955065371	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	1.57989517605929
Merged-chr4-149679505-1	3.70811489169422	-0.407114835992106	1.11015708734189	-0.366718224505401	0.713829211071481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18069501644732	0.988408630094828
Merged-chr9-122285463-1	2.72920356759587	0	1.43615345649853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45867184-1	2.48139419327945	0	1.45190516519092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29228287-3	4.82494140116365	0	1.36785520212398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67431594-1	4.40910380423002	0	1.3681684665416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152583846-1	1.97301026936695	0	1.69036629927209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97567956-1	2.03341445163655	0	1.44771469819933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106433145-1	2.81687490776172	0	1.40366555973052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37307408-1	1.81972765049619	0	1.52404774657233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91086384-1	2.66545640065834	0	1.40976129342454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-87077969-4	8.06144486405779	0	1.35627457281259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45020080-1	2.51983415488627	0	1.49667701224293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11778002-1	3.16681551030687	0	1.4633291921602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88745630-1	3.73534815142066	-0.994492656264449	1.05387561913818	-0.94365277856765	0.345347112180062	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18911587802649	1.56533893459231
Merged-chr1-171037081-1	3.18389010484252	0	1.38334485381628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22008496-1	1.60078518979335	0	1.46725301857484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130613813-2	2.75749148234407	0	1.40002194346026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90487360-1	1.84570051592988	0	1.52010931196082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59372931-2	2.89113167959503	0	1.40636763301158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23967881-1	4.13525013632105	-0.133050248217803	0.769243503299837	-0.172962459412469	0.862680935878217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9001726754443	1.97731223551783
Merged-chr17-10823187-1	2.12438772408229	0	1.51668537151597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20964402-1	2.06496425986898	0	1.65406459865717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67879509-4	6.5179708981311	0	1.37997397483031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-71876284-1	2.44968153361892	0	1.47290634235903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21403623-1	4.70021723206854	0	1.36418687076285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38949452-1	3.09715902790328	0	1.42297719973455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-47441705-1	1.36911820267955	-0.628418707753798	1.85927644467811	-0.337991001581583	0.735369968861485	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr13-95794525-1	2.20491801640893	-0.684321198893909	1.47341496696761	-0.464445668216801	0.642328477276293	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr2-84608010-3	5.25787621542016	2.32878609603493	1.20314031030921	1.93558978622903	0.0529179623055999	0.613471425244211	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.70869404742316
Merged-chr13-97544472-4	5.3995441585423	0	1.36293509282264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61954930-4	6.31868890109922	0	1.36310490965551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-144231577-3	3.8780939897756	0	1.41289149575918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28568428-4	4.68668445857201	0	1.36706241524633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140489752-2	3.68624512366431	0	1.40236363305983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37622134-3	4.07843000498504	0	1.38602779127506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59621786-1	5.01152154351546	2.43300210736379	1.22482093168438	1.98641453981188	0.0469873134858808	0.565585335203497	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39293125551424
Merged-chr12-8635787-2	3.84648605187364	0	1.37663606944368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102669077-1	3.40914347292361	0	1.39009659870765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97000598-2	7.16376321908365	-4.65031447776689	1.09828337279307	-4.23416632989769	2.29401114174635e-05	0.0017538699248128	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17652693925773	0
Merged-chr17-87181869-3	6.4998336285379	-0.721205062630441	0.788950968816387	-0.914131664876994	0.360647665800468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51392635472486	1.99710100584055
Merged-chr18-5124854-3	4.9064460746752	0	1.38881443530851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14269376-2	3.69002738596871	0	1.41424996210198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100639969-2	3.53467385835662	0	1.40476040808073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51553976-3	4.58733201292676	0	1.38658421487939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106702753-4	4.30453736974661	0	1.38922530824742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114680927-2	4.12119499924434	0	1.36879789479097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31067615-2	8.87903765788616	-0.826353196746265	0.579105994259335	-1.42694637067806	0.153595353427884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85683608756509	2.92441952901088
Merged-chr9-37086341-2	3.89586089284587	-0.035223123962902	1.37723164344503	-0.0255753083590168	0.979596080701831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.600815099743027
Merged-chr9-45122470-4	12.8264330811624	0.827970993526398	0.532186599176797	1.55579075987093	0.119757856075832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9185122841552	3.86662871619073
Merged-chr2-145827363-2	5.27167917616028	0	1.3913747451507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31110099-2	5.21838255680209	0	1.3628510634071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83689580-3	2.89294504030328	0	1.42935743246338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102507026-3	3.99346812637569	-1.13373192996003	1.27918815650544	-0.886290202261744	0.375461167334736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.376242425970964
Merged-chr10-22334172-3	7.84873325203926	-4.31640226526381	1.05718749923487	-4.08291080663343	4.44750961654064e-05	0.00299953071024234	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62460369158793	0.376242425970964
Merged-chr14-60916875-1	3.29012789280819	0	1.40644028173622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59975451-1	2.67223529851041	-0.739323462540107	1.19200843617976	-0.620233414546583	0.535104125408457	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	0.577068348605183
Merged-chr3-37754353-1	3.26467235525178	0	1.3875349942594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76522231-4	5.3689475346435	0	1.37097268703553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47175783-2	5.90599249720175	0.692360303659459	0.942980204429229	0.734225703156233	0.46281119069862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.73423104448184
Merged-chr11-78600691-2	4.02338826577801	0	1.39469932433161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123242466-4	4.58971538159967	0	1.36544202345323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43554524-2	3.83722778635104	0	1.41743012861271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45032763-2	3.97179409516548	0	1.36999958655717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94236263-6	9.7348636674	-0.4498005229013	0.521833226812243	-0.861962212810837	0.388708312010945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69454115686804	3.15696004346842
Merged-chr17-45807652-4	12.7450501829076	-0.615869442130787	0.640027730719891	-0.962254309571975	0.335921874195129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81158044232668	2.10715954493255
Merged-chr16-93815981-3	14.642318403071	-0.0224710413104964	0.459638867208265	-0.04888847074004	0.961008176893068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78315460108097	3.67158805699498
Merged-chr1-153543709-3	4.43652802610249	0	1.36860494866744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91778150-2	3.60313889193792	0	1.41314304804342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167313933-2	2.85546014212785	0	1.51413900357494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64638639-2	2.92565960338347	0	1.46603063312477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74939546-3	4.08062936448909	0	1.38194242969705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148959199-2	3.03642430188023	0	1.42507909193333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58238054-1	1.83003116510321	0	1.43989300156604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79487514-1	1.92112976042849	0	1.44677814436973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128902590-2	2.60782907346865	0	1.47818846014951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114957176-2	3.26836217297491	0	1.38694353369801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38922475-1	1.66233260061682	-2.73541060745089	1.37448097356765	-1.99014075862452	0.0465754320108387	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0
Merged-chr4-72232389-2	2.48440059095931	0	1.50134219345825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86632639-5	13.3130383570684	0.34862826815598	0.466704797151032	0.746999538646608	0.455063839321126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67526486527475	3.96304855577878
Merged-chr15-76794985-3	5.30896699353342	0	1.38045564383938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66768798-3	4.12992407862548	0	1.36640404735821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123024460-3	4.58588780862973	0	1.36411506224241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91180074-2	4.84448207208902	0	1.4233006195233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88246937-3	5.7279450631641	0	1.36637041132671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95960804-8	21.7834990510372	0.398740077528293	0.391419944208228	1.01870148271283	0.308344708466577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73917687772666	5.08399923701305
Merged-chr12-8348235-2	5.87374114974324	-2.17490122505608	0.917824740067257	-2.3696258447955	0.0178060942803825	0.297332440806709	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26702399068743	1.10056930386922
Merged-chr9-118631756-2	3.40388985803091	0	1.44052718899308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9455398-3	3.23355445978147	0	1.4088176111537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81022219-1	2.5704089042295	0	1.44678512748027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133550009-1	2.14697624186664	0	1.40881576495404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44698148-3	4.3926426961786	0	1.37245867664332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31077018-1	2.35091053716816	1.62074809328186	1.46684656623669	1.10491998998915	0.269194259730493	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr11-68904996-4	15.687769007391	1.0657723635643	0.418262024367135	2.54809736833483	0.0108312235507913	0.212018178248997	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13975214565339	5.18255587399454
Merged-chr2-58797086-3	3.86173358715858	0	1.37552797380679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34465649-4	4.17958771116247	0	1.39607099584691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51899302-1	2.97004204042896	0	1.38481532601806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131085394-4	5.62067345681437	0	1.36793067528207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70929095-2	4.59154899611454	-0.96450212438436	0.909191926096179	-1.06083445827073	0.288765139385368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09145770840793	1.30064958020929
Merged-chr6-83415718-2	5.22988486888159	-0.367816182719442	0.832102089881825	-0.442032518836336	0.658465674450305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.543490698388	1.77006617524958
Merged-chr1-172644577-2	5.08943582197393	0.971421998387005	1.01646139233411	0.955690010179647	0.339228871056105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	2.11005512232597
Merged-chr6-51550173-3	4.18838374660503	0	1.41240669382564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24965376-3	3.1750651337484	0	1.3981212073289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63138917-2	3.80044055196792	0	1.37579731049019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135154613-2	3.88655371879324	0	1.37792570171264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27438937-2	7.5927958311947	-0.942198359462551	0.740673862741772	-1.27208263563506	0.203343760094599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34715788258956	3.49032389460725
Merged-chr2-118263980-2	3.79754901333565	0	1.38521714699178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11089212-4	6.36228772660697	0.396496132519276	1.08742150284452	0.364620463621608	0.715394737250317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.02748994520012
Merged-chr1-191391515-3	3.96290399816668	0	1.37153543968756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93129659-2	4.68452187702655	0.977871456805575	1.11041407391019	0.880636764051552	0.378514453326053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.67817082645307
Merged-chr1-131679189-4	14.5844245106679	0.296134808529275	0.513933835783323	0.576211932179782	0.564471940966315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39366797374709	4.7058489375434
Merged-chr3-60320382-3	3.24154039409513	0	1.42700321670553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25569903-1	1.92379572922142	0	1.47615507302515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24470808-3	3.77202288607531	0	1.3952760420137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84111002-1	2.64434715530137	0	1.43399928320905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-19909-1	1.01734601495097	0	2.3286223056078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-108259500-1	2.55517001729922	0	1.42463829076982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98402782-1	1.5900785652037	0	1.54092513738472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68146975-2	2.56105570928718	0	1.50678346792148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83509737-1	1.9887458635054	0	1.4823269265052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12440315-2	2.92686466547586	0	1.441914816079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108762189-1	4.49716347027352	-1.62670772634063	1.10331748839595	-1.47437862940577	0.140379675110491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22029751155607	1.45451904642141
Merged-chr1-186451830-1	2.08393822262793	0.616951003779957	1.32056132224117	0.467188454931353	0.640365052885067	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.730937814817307
Merged-chr13-35074204-1	4.45287766806509	0	1.3764395922326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17925317-1	1.82796463833767	0	1.54784601009988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4707502-1	2.03704105169094	0	1.55963900945321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9892762-1	10.0438945525542	-0.77621605745135	0.548811562354818	-1.41435806148251	0.157256797235609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72064744019697	3.01458896732428
Merged-chr5-45402786-1	1.75058098595729	0	1.51782570729742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36123686-1	4.36616315636431	-0.616956571315178	1.11339208042781	-0.554123369620267	0.579494417543496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00775690860912	1.70266130792036
Merged-chr11-97623422-1	4.63539076511393	0.657323135128494	1.11137140496686	0.591452265364067	0.554217429815367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.41478649953382
Merged-chr6-8546437-1	3.51241498778616	0	1.38951905296479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5131424-1	3.3214689686299	-3.07018202726131	1.16667320979166	-2.63156983591795	0.00849913976852239	0.18041451769923	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29666818073796	0.303163067301871
Merged-chr1-172594673-1	4.04486576045733	0.843283081515724	0.979908195370145	0.860573557298587	0.389472954769404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	2.1402320108655
Merged-chr7-24978933-4	6.13560553844651	0	1.36135034950673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-110728017-1	2.84483159890778	0	1.40927891192794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148252897-1	1.71300587718635	0	1.58185338356488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149645657-1	4.23330779460985	-2.3461669008176	1.06816636187098	-2.19644334868223	0.0280602258264779	0.405995692228244	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77266404657277	1.06702908365212
Merged-chr9-98973319-1	3.04343030863725	0	1.42598712846902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-53266472-1	2.64902965332784	-3.93936508105688	1.28080009080839	-3.07570643485083	0.00210004498289493	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34757907598192	0
Merged-chr17-72833482-1	3.206048634783	0.435471766786888	1.32757666488881	0.328020052102497	0.742896501304657	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr19-40626602-2	2.53936030474877	0	1.46975358929012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84829584-2	3.68866872113044	0	1.37489993625503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105059823-1	3.02543461426598	0	1.3912339477986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62757075-1	3.4992148748747	0	1.42944328638777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-76068117-1	2.51593048870564	0	1.44173831795955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40723021-1	2.25540562259019	-0.160651872976169	1.44699568065902	-0.111024431602313	0.911596972881953	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.465515277017237
Merged-chr8-94371579-2	2.67115682859838	0	1.39570792694404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35235600-1	2.29575599795613	0	1.4417775605519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35752053-3	4.29618756890176	-0.0368512861475667	1.1544221921928	-0.031921844882043	0.974534377818951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr16-22358644-1	2.80366153742102	0	1.46173170364379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55723424-1	1.19866456556561	0	2.13998825388301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4364181-1	2.73860854167545	0	1.62524889715643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64630986-1	2.40447634037157	1.75329321695756	1.24648346879658	1.40659163225829	0.159548515767321	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	3.07844311685166
Merged-chr2-28924122-2	3.03728013550472	0	1.39726048464319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139505300-4	8.62434890901544	1.08322668733596	0.641983763802159	1.687311655548	0.0915434409757794	0.860191859637406	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11413112565287	3.34851348828925
Merged-chr14-105483147-3	10.3847918223253	-0.137218740558111	0.531891100201627	-0.257982772236826	0.796420203063078	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09635151280813	3.90010468606519
Merged-chr3-14881146-4	12.5700909407978	0.400457723071426	0.670552164432506	0.597205921198296	0.55036990641108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73301515794639	2.63341362484704
Merged-chr7-39553298-3	10.9607605999566	0.591860917960301	0.531160958176224	1.11427790173527	0.26515998418813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04381056405952	4.23152622335877
Merged-chr19-45030779-5	14.3936760485572	0.32344750599239	0.612773625563281	0.5278417550936	0.597609173477386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09296523225154	2.37698098272728
Merged-chr18-76380259-2	7.13498334197778	0.651885448532113	0.653832688683872	0.997021806670941	0.31875392524705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43067782037622	3.28785466390159
Merged-chr2-138311104-2	4.26874868403256	0	1.38893611451171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138013902-3	8.44036413294976	-1.42397836554978	0.740998382873008	-1.92170239296436	0.0546432159874318	0.626788473910277	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90080629403792	2.20527733091653
Merged-chr10-14020437-3	5.88526081350744	0.408552746185737	0.748653800761242	0.545716519131158	0.585260815002807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84231959469675	2.55508835029063
Merged-chr17-56337459-4	5.21369043072749	0	1.37517894928782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131552742-1	4.1973333511189	0	1.37038496678878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48410418-3	9.11633060015467	1.2995471363649	0.746690708585382	1.74040887535203	0.0817872481941375	0.804682900377397	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50921536809972	3.2743634617545
Merged-chr7-80640737-2	3.57313768859283	0	1.41925274822487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94569102-2	4.08439777824881	0	1.40731759625699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144004368-2	3.24521481578214	0	1.39641233179045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3382476-2	4.39732991368402	0	1.39101027121032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130890292-2	5.21911895265774	0	1.44137480910208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94909083-3	5.17499792506563	0	1.36854409912803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73389289-3	4.20833499539405	0	1.37697497248173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137821285-3	5.28764089003884	-0.57420985728067	1.26357320720073	-0.454433390964938	0.649516923720168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.55634759613363
Merged-chr18-88772959-1	2.58929577669049	0	1.40284937233133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63413682-3	4.55497102218336	0	1.37874799271953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117404085-1	2.21067542966112	0	1.43086335751499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30408585-1	2.64532344539153	0	1.42354484206448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96206905-2	3.07105096475618	0	1.42251127952973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31224709-2	4.47575008117819	0	1.3997493406741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86885119-2	4.31593178726147	0	1.39014893516214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-24395004-2	4.18971876484916	0	1.37160939483928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135516490-3	5.60332168542131	0	1.37733058808376	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-175620008-2	3.55445763191016	0	1.36798056062381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35894486-3	10.1246501205975	0.909117504872353	0.587171977110175	1.54829852294155	0.121550439918272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56956507902297	3.84518236419444
Merged-chr8-123924894-5	11.1725971411582	1.3442807039331	0.646583630616695	2.07905155695166	0.0376126119596822	0.488639547851514	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37544986530815	3.44140456833963
Merged-chr17-13850382-2	3.11977362627486	0	1.39200673723527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69509784-6	15.789375985064	-0.352827493792111	0.459282724520561	-0.768214162987345	0.442359960584213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.84395133830581	4.5022666071847
Merged-chr1-106231992-3	4.2418039580614	0	1.36757884588827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106734033-2	4.63948399348491	0	1.3700504259261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155895401-1	3.45984323485597	-0.693565743785177	1.03886727556701	-0.667617279027903	0.504377925148061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84681464190051	1.7036528946346
Merged-chr1-95366424-2	2.24334360302517	0	1.44997344617494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-20940451-2	6.79513835284189	-1.44311864046306	1.25186933544184	-1.15277097985127	0.249004398732256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.376242425970964
Merged-chr15-55276214-2	2.05634113024152	0	1.46326214925576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81129045-3	3.70380457713308	0	1.37695174326765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31373014-2	3.08055448330574	0	1.42837789427941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61660973-2	3.77445242421712	0	1.38181558350546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117964886-2	2.64872489590161	0	1.47918394206128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77460724-1	3.97486288423215	0	1.42366744265553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51289305-1	2.22282068174037	0	1.43529283915383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4536128-2	3.44129558835328	0	1.38358651711004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110211489-2	3.06893958483391	0	1.38520618725149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61412789-2	4.13576023298571	0	1.36520744825062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124897445-2	4.76549311096811	0	1.3796348043261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34637082-3	4.98576002317911	0	1.36180061442881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72991649-2	3.84990586560451	0	1.41559914901658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96886458-5	14.6110065638749	0.0913423039027847	0.564890333388957	0.161699180360891	0.871542750024254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71851383560038	4.77798641176621
Merged-chr2-129384135-6	12.7172330815151	-0.170721540051228	0.499746480097885	-0.341616293160862	0.732639673964262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96923246971509	4.23975487545446
Merged-chr4-3720546-3	9.83678875746655	0.847798771085621	0.54828742223192	1.54626704299449	0.122040087898985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10553501069898	3.99802772869716
Merged-chr19-11404634-4	4.48345934138239	0	1.3838611482422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128334595-3	8.34073754989148	-0.244912666797864	0.71349788437156	-0.343256332166394	0.731405629126994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71584972307826	1.81611181189916
Merged-chr9-100455232-3	11.501141919819	-0.155220139779189	0.508009368541732	-0.30554582137876	0.759950476931735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02858678969315	3.35607765058437
Merged-chr8-128709439-2	3.63325972304589	0	1.37032180933859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72369504-4	5.17887773466377	0	1.37599753223426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146685075-1	2.29126416269931	0	1.41371058929761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109239026-1	5.60107057889718	1.18937225567817	0.632757478926797	1.87966526716592	0.0601537120567805	0.667748874997776	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14242356165217	4.32788564307638
Merged-chr4-119958966-1	6.03926616111245	-0.443122771554269	0.788013954248571	-0.562328584621092	0.573892166307712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00554713990774	1.71465869101023
Merged-chr15-30610485-1	7.91480308768358	0.130372974637387	0.734726993979094	0.17744410604995	0.85915956533419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30728238953869	2.6823465686335
Merged-chr12-108206864-1	3.51026514165732	0	1.39300127856665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100079913-1	2.56197277238567	0	1.45166050511379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156956373-3	10.7932633850959	0.0241467045926953	0.54695219345054	0.0441477424934742	0.964786636851631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54054682698176	3.40994660827217
Merged-chr1-45872375-2	4.25207146145619	0	1.38599207071037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22808449-2	3.55823939430999	0	1.40349272174342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19803168-2	4.07338783756824	0	1.38243802559988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19567056-3	4.58453306477107	0.606991792842095	0.950485775871054	0.638612179425652	0.523075256104946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	1.7473876027772
Merged-chr6-87804920-3	4.49669515646803	0	1.37988906110887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84595955-2	7.65753422796479	1.48432206704666	0.784709382132403	1.8915564167375	0.0585501074577395	0.655908101470409	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94985701881947	3.46525324592883
Merged-chr19-3719178-4	4.68594424003496	0	1.37101051359796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4194832-3	4.97982861358363	0	1.38370355448311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76052175-2	4.54849027969254	0	1.38206848838349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137895393-2	8.30637462151297	0.191510526751339	0.554839034215935	0.345164119575635	0.72997099146072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38864452260762	3.80346840718302
Merged-chr5-125271705-4	4.11245227240151	0	1.38230606581209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67419606-4	11.0115120645461	-1.84265500959087	0.627916985342971	-2.93455194333436	0.00334029639519478	0.0927350213209363	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0971666157811	1.97993309388876
Merged-chr1-162838074-3	8.00053015310538	-2.50298286980219	0.80245732641434	-3.11914763241852	0.00181375058243693	0.057792302409548	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6442136112044	1.55424902326769
Merged-chr2-25551326-3	4.10903678319349	0	1.41537600135317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65891315-2	10.1608078066897	1.16965574066304	0.514881393408751	2.27169937705338	0.0231046738467648	0.355718122107207	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16787712908294	4.59776618268092
Merged-chr2-34776064-2	8.05098831882473	0	1.35660933516131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14002968-2	3.01953625203743	0	1.40442267207271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-45337124-2	3.76273237673853	0	1.39385084043118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-53006291-2	2.91323685670357	0	1.4107256439187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38120728-4	5.20252795130427	0	1.35986525207956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102506795-4	5.20136876174139	0	1.3581318706938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62091805-1	2.61285315953481	-1.26661193179704	1.4031028056269	-0.90272211467151	0.366673396406361	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr11-115640591-1	1.82617248749084	0	1.47480639864716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85342121-1	2.82692433941045	-1.7278403073187	1.14999944117355	-1.50247056255564	0.132975624880001	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03247245696714	0.577068348605183
Merged-chr2-27595443-2	3.19249775775269	0	1.41036909734148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19095524-1	2.84737677686831	0	1.60531529812336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32958248-1	2.15158999751517	-0.496387591658584	1.45539292006268	-0.341067752093507	0.733052577335277	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	1.18909650862134
Merged-chr3-101616027-3	6.36981325832033	0.905565229269855	1.13995904607178	0.794384002118646	0.426971914622816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.25298535761957
Merged-chr16-24902590-3	5.32027180593918	0	1.42710022617684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-47945543-1	2.97592361627293	0	1.39908252022014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80603147-1	1.78092904794208	0	1.53161711342774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76758561-1	1.89740487596347	-0.685448125803044	1.46367732550123	-0.468305489099732	0.639566143619086	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr4-133076837-1	4.08876741982945	0.575670137830326	1.14295463169008	0.503668406312058	0.614494413363417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99007277129357	2.61852736837649
Merged-chr13-10686525-1	2.67475308821313	0	1.46618914436592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56763883-1	2.55984810048678	0	1.40611248310572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47113139-1	3.09762605435654	-0.65635946767827	1.76553390925224	-0.371762595008021	0.710069615611795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69736543272236	1.71450075940727
Merged-chr18-68813290-1	1.39099384961135	-1.47745457342618	1.8568821185429	-0.795664172039923	0.426227256608491	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr1-173955614-1	1.58330240858851	0	1.54523615225112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53890525-2	5.76713888636897	-2.78801034352712	1.04106672832541	-2.678032317882	0.00740560725035218	0.162838466776062	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51756482421134	0.789505890477757
Merged-chr5-122903521-1	1.81169496173297	0	1.51299660859544	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39091551-1	2.23877915142076	0	1.56439953991093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73370602-1	3.19559578926817	0.788234414343339	1.17994784013276	0.668024795277945	0.504117765107055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.30064958020929
Merged-chr17-64232548-2	5.8845738071883	0	1.36884227283839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120434345-3	4.13711181686132	0	1.39486908711738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99674989-1	2.80556722845702	0	1.45221732092017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-44981616-1	2.90218894104838	0	1.46698213952668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52095894-2	2.1495093323713	0	1.53406808048867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105914265-1	1.20560025433364	0	1.62653404679133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129306684-3	5.1148319996949	0	1.37901576209165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118011034-4	7.96724666190498	1.80794499424538	0.929794807706487	1.94445589420424	0.0518404991976789	0.604625371000121	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.23659438538296
Merged-chr11-4080403-4	5.41631034899546	0	1.3523490696644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107675879-4	12.8743915929759	0.293443444590743	0.60189333534516	0.48753396550315	0.625879978819132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97849869936908	2.6680482019516
Merged-chr10-62411149-3	4.0869013484939	0	1.38918159339317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54910047-3	5.45406519853615	0	1.37803806283822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66907690-3	5.49648592299751	0	1.3719118141037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-42954575-2	4.23424013621928	0	1.40021999819632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75143374-3	3.9005351359184	0	1.38316328547953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20112770-3	6.82614595257941	1.9560975978098	0.877243649074623	2.22982246707996	0.025759231237801	0.383104254680062	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	2.55959774926253
Merged-chr13-44228772-1	6.84497020528924	0.218448056367132	0.783168676294424	0.278928490093249	0.780299703948808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92027594280124	2.41910681575556
Merged-chr7-135522285-2	4.37232908764631	0	1.37772932006416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101213983-4	10.5673305422008	0.0633291689338457	0.747167922754435	0.0847589504383201	0.932453028858119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53857528724196	2.13869887539473
Merged-chr11-72866688-3	3.37346499620939	0	1.43049479676974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92692359-4	5.14737262834966	0	1.36423843595754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-39831393-2	3.46119444472483	0	1.39332441735318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33035945-1	2.49495688767595	0	1.38332947618168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135899262-2	4.08053488735661	0	1.38025154103712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-104280096-2	4.02862183416949	0	1.41954266027094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29470140-3	3.99031914357345	0	1.40273348886667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24948594-1	6.63173483824456	-0.569017315971565	1.02136688497827	-0.557113535146259	0.577449860414428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94916330874209	2.0906146763627
Merged-chr1-64053794-1	2.98638158207943	0	1.44218417194934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21502509-1	5.33285822647232	-2.04096888588662	1.01852873919446	-2.00384025246139	0.0450871754242546	0.550538501234779	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36173837884825	0.969611060640422
Merged-chr10-96171774-1	2.50813394279891	0	1.40179249708806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73755320-3	3.60196596036716	0	1.40164906377901	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149338941-4	6.76280550714797	-2.19990444452273	1.21984608190695	-1.80342788910194	0.0713210409334007	0.74030438595242	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0
Merged-chr3-51701529-3	5.43011928919518	0	1.35629656088567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180390594-4	5.20211934859154	0	1.38190058724592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143061184-3	3.8762438875342	0	1.3973049636323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80313762-3	6.62179244240074	0	1.35654072647305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48844347-3	4.54480908432799	0	1.40815181910379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-140465763-2	2.78838213336612	0	1.46203899859536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87362354-2	8.8167291216989	1.0913519699853	0.642379637429091	1.69892055475648	0.0893341535465713	0.847489572886225	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03916911456376	4.10957707461474
Merged-chr13-34864601-3	3.11012753373294	0	1.46775288860476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117842162-1	5.64474463268864	-0.452980140635924	1.24944754247231	-0.362544344790659	0.716945291756972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.601513806634888
Merged-chr13-100156859-2	2.39227957510173	0	1.57965558447742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34016042-4	5.50221902304076	0	1.36090970744467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91019979-4	8.80069633688093	-1.09688428929418	0.568135118890746	-1.93067503279112	0.0535232523841211	0.618378422178202	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19011706352935	3.03729493864217
Merged-chr1-56100272-2	4.9482532815322	-2.9168706957802	0.871291874808	-3.34775381260496	0.000814693481030161	0.0307327709474799	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0949824832327	1.13341594473881
Merged-chr10-67259941-2	3.54221129202528	0	1.4421203675474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135118639-2	3.30974463869296	0	1.38459214406588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80376159-3	18.6083044124055	0.172209916096476	0.436376533161354	0.39463606085527	0.69311149640377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20402633825294	4.36211961123197
Merged-chr8-40449450-2	5.65205135986589	-1.03004858214524	0.801184764263284	-1.28565672749956	0.198562889508048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42760559021134	1.66624882212637
Merged-chr7-63908879-3	5.26595832203535	0	1.36527458511968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24973167-2	4.00831684632721	0	1.39694448477788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10645890-2	3.9553329769785	0	1.39064822369853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8260471-3	4.61298439525987	0	1.37104307743567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51743608-1	3.08546162781064	0	1.41228988899115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13761159-1	2.61370656866785	0	1.45126000328696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4370697-3	5.72056205484336	0	1.37511931408551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142525047-3	3.93331607832751	0	1.38039075796676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191449675-3	10.929017191713	-0.261110217892788	0.60585566023636	-0.430977599170935	0.666484658523333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92175658350218	3.52069881107816
Merged-chr5-113180403-1	4.47481909678792	-0.247436185771128	1.02162952088514	-0.242197568406941	0.808627079102011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85144754364776	0.94927122251658
Merged-chr2-145720929-4	5.98005228670873	0	1.40871699503607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145018417-2	8.66231176986975	2.73243153677802	0.929797577064689	2.93873806963891	0.00329551452642607	0.0917729888022515	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	3.20063790152292
Merged-chr9-99062712-2	3.60330777207496	0	1.39975472149171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82927341-3	4.00326677912508	0	1.38697251630461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-36013045-2	3.06171873430189	0	1.40178757119192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41550722-2	4.09173015738113	0	1.40325973269594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156967321-7	15.055048708557	0	1.34833720943363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126135616-2	2.85539954729891	0	1.44195062315817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30786315-3	4.91808773825085	0	1.42034800868305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131587073-1	2.8008516497567	0	1.46516628208534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72694082-2	3.89142907250606	0	1.38381532661984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125526193-2	3.93306067911732	0	1.3964483576818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95427693-2	6.66435539932095	0.179652433390257	1.03316754245038	0.173885092212801	0.861955768835185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	1.17788344834821
Merged-chr3-8816958-2	3.7815510471355	0	1.4931637813217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34066323-2	5.78713031196443	0.620678449281897	1.40600566964883	0.441448041555138	0.658888669006608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr6-122801188-2	3.69336161169965	0	1.37379545519602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103347396-3	3.72971790202749	0	1.38355181937145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154902325-5	8.6183809082975	-0.740412102285363	0.702018862454213	-1.05468975533924	0.291567238712033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98459585107782	1.86774501229157
Merged-chr14-27351167-2	7.98427890184233	-0.55199301360799	0.709080078434238	-0.778463576112417	0.436295771481942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21918377963308	2.42150740775557
Merged-chr6-81440718-3	6.30030602500169	0.154627611697896	0.787177678487935	0.196432922227819	0.84427132997134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34258099779799	2.50250689673154
Merged-chr4-137807528-4	9.27954729179794	-0.0603248528861896	0.968492860038844	-0.0622873491124861	0.950334002860556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.14143228603163
Merged-chr16-33416474-2	3.08532850361932	0	1.42518279578053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25761487-1	4.17555292283266	-0.0533501426469917	0.918754291976633	-0.0580679112063931	0.953694534394887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90927269178975	1.75107117680423
Merged-chr8-115234253-1	2.33053873594762	0	1.46586039132335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95961277-1	4.70217187961405	2.56178045233092	1.09963319821821	2.32966816251265	0.0198236964971063	0.318250536883108	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.98107660668837
Merged-chr7-126749109-1	2.50577923273517	0	1.46376914680584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99956309-2	3.15286168693453	0	1.41088090175323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31110338-1	2.20870194798375	0	1.46161332754809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52631115-1	1.05074112633394	0	1.68635458692319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5109973-3	6.45561934890151	0.855833020252472	0.784722081374295	1.09061926580891	0.275440448588158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	2.6224436863189
Merged-chr17-78604128-1	3.8791145423404	-0.970889698010421	1.06318898436023	-0.913186378237968	0.361144526865893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.724326877898254
Merged-chr1-34201635-1	1.78561580377385	0	1.53727894258966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25522714-2	3.44479637266423	0	1.48053525592538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63912784-9	15.2582214616985	-0.9068738972198	0.614625611748207	-1.47548992408621	0.140080875203834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41852851987129	2.42150740775557
Merged-chr17-71966426-1	1.39966918176831	1.72603906555365	1.64473627015673	1.04943211679109	0.293979283010423	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr7-114460040-1	2.33633428604961	2.1936377416471	1.28983233226571	1.70071542383635	0.0889964374252451	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.34263109599227
Merged-chr9-63421434-1	1.99268795771541	0	1.55471707516952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75196322-1	3.89531497365285	3.79032989193416	1.22288942666149	3.09948700945255	0.00193856078734579	0.060841931777904	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.81033887371641
Merged-chr14-122049288-1	2.41751170363618	0	1.46343319167435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76516122-1	1.80409899755859	2.58951280040383	1.47085633523402	1.76054774240872	0.0783149801136967	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.54998568242928
Merged-chr15-86147446-1	3.02102786738868	-2.65240239142038	1.16273564033354	-2.28117406864687	0.0225381485728751	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22372608145735	1.14143228603163
Merged-chr1-161376956-1	3.82485068561925	-0.437421654781657	1.30890764322902	-0.334188326460189	0.738237452259041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0.600815099743027
Merged-chr2-45103014-1	2.21277800453847	0	1.47716287821223	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15300842-2	3.59431308016225	0	1.3968159873688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118017305-1	1.52337433107939	0	1.73883728178028	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39735106-2	3.2349748868137	0	1.38508209544923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37721610-3	3.49747114065833	0	1.39992113837982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30618353-2	2.51892224330122	0	1.47634720609485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72748630-3	5.58395843001868	0	1.37575573354179	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70784221-1	7.14286624907461	0.612023897181488	0.599462715319166	1.02095406693581	0.307276201397797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32140467863878	3.83327288337935
Merged-chr2-77202156-1	1.70220392178908	0	1.56451402561573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79125992-1	1.4660629073668	0	1.6323737959744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143975535-3	4.41030364008278	0	1.36120471140643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101012301-1	2.73580237667685	0	1.43508316306377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-62003789-1	4.27952629430272	-4.8100259556447	1.14350393644088	-4.20639212718038	2.59479851359819e-05	0.00193220071781759	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14165163666735	0.41385117919798
Merged-chr3-54111355-1	2.33283230453586	0	1.43354898023503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67571935-1	1.91596984264813	0.593818732029591	1.64829158522934	0.360263158139565	0.718650347649335	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr12-44548147-1	1.35290261578515	0	1.6089653687397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-94017936-3	4.05023251892672	-0.692453414135722	1.40078217104837	-0.494333400615368	0.62107074019346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr3-146111731-1	4.19698282188478	1.32522971388318	0.923870877427482	1.43443174393946	0.151449094299095	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13939166524368	3.06868321259846
Merged-chr8-77484401-1	2.31452665579258	0	1.54926600013357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-28485831-1	1.8109469563077	0	1.46213299690146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163848980-2	2.47896744419186	0	1.51966283890502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46444455-1	2.48071325638321	0	1.43155764871241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47374645-1	2.21475605677356	0	1.43815888479192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107762956-2	2.27659105553566	0	1.43934129299217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12059645-1	2.5240356245459	0	1.51568430482218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80358023-1	2.59711767326177	0	1.39631022447245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89028515-1	5.85009230198352	0.734821503885003	0.800973016780365	0.917411059412129	0.358927279612354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56843324598166	3.05275195676734
Merged-chr10-85355390-1	1.64557518584551	0.60340379312801	1.5688712719031	0.384610135920238	0.700526283386226	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr9-109046424-2	4.92894667660432	0	1.39879857603955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139727158-5	12.9279520102939	-0.396013136224979	0.51966123014495	-0.762060190856491	0.44602408092984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96323632588277	3.65645658612034
Merged-chr14-67811304-6	14.8335704292329	1.09625395828407	0.634833905151536	1.72683586901742	0.0841971446169687	0.818321577728196	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6610376730509	3.75122801216397
Merged-chr18-11793285-2	7.17930221885422	0.551789970555585	0.729920931875985	0.75595855175357	0.449674046801752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92928224843372	3.32283695314
Merged-chr4-133879424-2	7.86485195136196	0.254784309513844	0.566927922190969	0.449412173119285	0.653134351495375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19546115298747	3.46940692381713
Merged-chr10-95476167-2	3.40564668966166	0	1.38278793881332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161352199-2	4.83379808099475	3.4640605501032	1.16528350799122	2.97271910770859	0.0029517444629361	0.0839633057356062	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.06541838463802
Merged-chr10-4405119-4	10.6703168533275	1.3357989650836	0.665802689120359	2.00629854296387	0.0448244053959102	0.548486988590891	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18423239235348	4.54270230899115
Merged-chr15-85090957-2	3.51473426185323	0	1.38129780693258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41999309-6	19.4017285944473	-0.367413670569511	0.482649241197307	-0.761243651099645	0.446511550278706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48593626509972	4.25638246172673
Merged-chr8-80992121-6	12.5025659499781	1.2519252821672	0.498163321035517	2.51308201407695	0.011968150819145	0.227713234293981	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20726183519	4.37882797622078
Merged-chr4-138319694-5	11.1825060457256	1.48635394314886	0.565178997260117	2.62988177259669	0.00854145670556402	0.181086211020965	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47092068604539	4.3323223473883
Merged-chr2-85560417-3	5.52302815127626	0	1.38623370284982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98513839-4	4.08292214405697	0	1.3857807688865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44126257-6	12.2053936006084	0.249345934849718	0.555491983198657	0.448874047495561	0.65352251859079	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14122123123162	3.45583624514549
Merged-chr7-100208054-4	5.21497198697032	0	1.36752920378899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8889464-4	5.54903280962591	0	1.37531698297645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54627154-3	4.90126740842813	0	1.39165645129761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51165539-3	9.52179774202238	0.0604023523226155	0.609004560356085	0.099182101834013	0.920993685449831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63067865034235	3.38054605667663
Merged-chr2-162958424-3	4.0436839988666	0	1.4244990206245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131393845-1	6.93122940209723	0.573136154665163	0.684925112555494	0.83678659777382	0.402712532101432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1552264446993	2.97567138002921
Merged-chr6-108449123-2	10.9381216204064	-0.145478633117923	0.472283346168725	-0.308032528138205	0.758057581060211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91475812496089	3.80764452766178
Merged-chr1-161552238-2	6.77433115482649	1.23083036113356	0.807025994214982	1.52514339061758	0.127223336608209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	2.23795018088832
Merged-chr5-136248299-3	5.59399645746057	-1.34333637701085	1.34605519303243	-0.997980160073934	0.318288979303757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr3-84390993-1	2.78029036963686	0	1.39298752855306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12969363-2	4.15941617520786	0	1.40398413513516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110813292-2	3.48772663447611	0	1.43073062524176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32787869-2	5.60064095413224	2.29576206136533	1.17446255502822	1.95473414757797	0.0506144573826234	0.594044576439387	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.25163494309627
Merged-chr4-59594689-7	12.8162186407378	0.105665991052311	0.65407944371975	0.161549169702366	0.871660888068579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63900399389441	2.2200817938085
Merged-chr5-105746225-3	8.4978034506026	1.19620424018452	0.76136667359871	1.57112765985735	0.116152998935973	0.996446063802034	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51124524563069	3.58046338159232
Merged-chr6-34927354-4	4.940436161143	0	1.36502442314164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73675642-4	4.511424000305	0	1.40315939040078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45068116-6	13.3711535350757	-0.839470131201902	0.595756078348887	-1.40908361947134	0.158810443856682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3811700253699	3.04040427329471
Merged-chr12-102391008-2	4.80058466887383	0	1.38476559432049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110713210-1	3.23524426962168	0	1.41558848022769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46704363-1	2.28190053273031	1.21295631916126	1.54048370398461	0.787386660452062	0.431055553182012	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.724326877898254
Merged-chr7-142356276-2	6.6979750257478	0.200514811368346	0.667427203393849	0.300429485565967	0.7638495756127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61810980047629	3.83585096395125
Merged-chr10-42780926-1	2.57528039384818	0	1.43430854643108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82970871-1	3.4239873962001	-0.812320632694064	1.12119948106619	-0.724510353787892	0.468752473026249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.16585218386913	1.38950137562363
Merged-chr13-41825649-2	4.92295813584793	0	1.37457701001213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7870505-1	2.80601974698557	0	1.39509833111469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63416065-2	2.93444381319852	0	1.46837505825668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22814221-2	2.51472717382547	0	1.49918940235923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89553398-2	2.59133069927187	0	1.42520561574508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30994457-2	2.54195098162409	0	1.49547395405724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-76266920-1	5.79189058964822	0.884044924878102	1.07471904034434	0.822582360311451	0.410745533193736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74284746555225	4.52134529340862
Merged-chr13-101743430-2	3.00806502933148	0	1.40231036555476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51788368-2	6.16787908551531	0	1.36972221736571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25109841-2	6.60202300807088	1.37836514505553	0.753993549718272	1.82808612297884	0.0675366272825314	0.717035844228735	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	3.44472416521335
Merged-chr2-79677832-2	3.16645946756789	0.676330281268274	1.0260776406792	0.659141427953331	0.509804954795336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	1.39479953640345
Merged-chr7-97315861-2	4.19817045105261	0	1.41953715354545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-56486680-2	3.6120327533445	0	1.39890414294037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45489664-4	13.3175257373501	2.38327321503534	0.714829908481607	3.33404238792656	0.000855936129174643	0.0318683781135647	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8405601103675	3.8994635836802
Merged-chr17-35873937-3	4.06565674909152	0	1.38978759176481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105748538-3	6.25044309358542	-1.30398125099523	1.33473914783307	-0.976955874196261	0.328590998205414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr9-96167371-2	3.4193689735315	0	1.38662971754379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129406651-2	4.17720401847804	0	1.36738686330481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14506921-2	3.1805765158412	0	1.38068543006935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35597338-3	5.02496078683935	0	1.39468162687826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100676326-7	12.8880953849018	0	1.34370181376489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40868930-4	5.05492873580438	0	1.44499051051791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133548938-6	9.0382522609841	0	1.3485436736437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56675562-2	3.48368427818381	0	1.39260834125759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54655895-2	3.63419963384182	0	1.42023746533672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27349132-1	2.04137283161154	0	1.44102570745317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36816151-1	3.01947892899097	0	1.41975938597386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87755368-1	4.98513157946708	1.32635192151522	1.01600045554581	1.30546390434706	0.191734930435341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	2.09664893240194
Merged-chr13-75786491-3	5.65134845182151	1.26036969565685	1.3475139364076	0.93532961819818	0.34961845599076	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr4-132337825-1	3.34177000482479	0	1.40905656182898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107611414-6	11.6871299311026	-0.0964220854605478	0.448785903916297	-0.214850967062752	0.829883514685239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03205332266813	4.04214172602188
Merged-chr5-117313611-2	3.26496453098259	0	1.41649734214937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125382213-2	6.86269428848572	0	1.49655406449482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54908476-2	4.98651690539686	0	1.37975661024937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138659105-6	8.86795594140617	-0.131156538408441	0.761597594009104	-0.172212385438383	0.863270561177509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21836476644116	2.11146687988896
Merged-chr5-146785605-4	10.2784965976436	0.534985104112066	0.632236323141726	0.846179007010549	0.397452891192977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0479809929552	3.49614002942967
Merged-chr5-66364071-3	5.10948361793684	0	1.39116702426667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24328157-2	5.4324242344049	1.53655611846054	1.00141400980579	1.53438648093064	0.124934601482963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26192334845542	4.26955821957593
Merged-chr11-9531056-3	5.3681859594913	0	1.38926375466155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103388728-4	4.59633403474358	0	1.36728866771037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26311729-5	9.49096415207845	1.32187321730579	0.697886861603554	1.89410818577166	0.0582106514278525	0.65379426564109	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98531404180197	3.69085695467424
Merged-chr7-143283992-3	4.71339546540298	0	1.37538405653769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82197961-1	1.64447585884525	0	1.56740007975355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34129155-2	9.30715870924077	-0.414364955369523	0.533781612828711	-0.776281807785859	0.43758261215622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44947080783995	3.3125609573506
Merged-chr6-140953965-1	1.60162068546702	0	1.56257037732057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24559422-1	1.34051964451284	0	1.54961858041565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100974100-1	2.14176363205525	0	1.44657163517842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3695951-1	3.32109494367179	0	1.4280075300214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4742060-1	2.15497567085718	0	1.47509351940816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74484160-3	4.0267019309558	0	1.36984221899471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137173048-1	3.4972574300873	-2.70610431323838	1.24925199561878	-2.16617970011567	0.0302974577315082	0.426026053772238	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77312233455388	0.815004392037195
Merged-chr2-27768519-1	3.45819665389009	0	1.43235983223838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-118379356-1	6.2720709289924	-0.00171535151744516	0.859607939699906	-0.00199550450644279	0.998407818819985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.80109304687756
Merged-chrX-12088972-1	3.44670893770878	0	1.38463800037317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124947466-1	3.80021620431047	-2.21750242158916	1.02418946621775	-2.16512910426449	0.0303777996960685	0.42669426710041	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8549648780937	0.577068348605183
Merged-chr1-170812824-1	1.55037635355854	0	1.61398781425839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24153758-1	7.20320344890631	0.946910320358642	0.792942381299052	1.19417292188034	0.232410332935366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72189711188045	3.79661172005321
Merged-chr13-96015640-1	2.67721890272714	-1.9684555509228	1.54650958967077	-1.27283759769111	0.203075676519599	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	0.465515277017237
Merged-chr12-8387117-1	3.79390627032442	2.46226256583592	1.33780945735095	1.84051813380924	0.06569220446821	0.705166378887722	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	1.79274021880592
Merged-chr4-139197152-1	1.48462250457465	0	1.65108766865825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8746519-1	2.74359996992247	0	1.41601031760984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28308927-2	4.73249940520444	0	1.36192683972346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47471907-1	1.31171190803609	0	1.57023577287953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133334943-1	2.30668673596404	0	1.53677325891227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167587058-1	2.67875242361496	0	1.39916628360979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65102603-1	3.17683969599819	0	1.47490518187138	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129016403-1	3.26812477229162	0	1.41467525577783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85127379-2	1.82519910021088	0	1.69217069221167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94597197-1	2.46355939792377	0	1.48029854199629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-97068939-1	1.95598926117617	0	1.42348977486343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33927752-1	1.39787442489426	0	1.52750241044421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24041626-1	1.52055881701087	0	2.3288974909658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59309880-1	4.99329675359229	-0.061047025943876	0.823741924213377	-0.0741094075091202	0.940923329738015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56877836903109	3.06155674521588
Merged-chr15-14485100-1	4.53587385646037	1.79639330078007	1.14601836200859	1.56750830556639	0.116995926389312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	4.15405216433136
Merged-chr13-36529055-1	2.01208681132097	0	1.53010501430141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44988915-1	2.76241553148626	0	1.56411110344299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30650149-2	7.09868178116384	-1.47898574760441	0.743549193254044	-1.98908930441015	0.0466913466728281	0.563770527274159	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93393177447526	2.13750051620966
Merged-chr4-89178138-1	1.91436496216611	0	1.53043468938576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97936961-1	3.54238122358493	1.21390626127218	1.36296257953568	0.890637996595412	0.373123408002631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr17-64548751-1	2.18109673603484	0	1.46692695085593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53112469-1	2.08811143894227	0	1.44923095683562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9516657-1	4.78544763322821	-3.17445805019153	1.06315756353633	-2.98587731401964	0.00282766062513853	0.080941971522857	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47399982341541	0.723581231604105
Merged-chr3-51653322-1	2.45624922417208	0	1.47963211011912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18899484-1	2.08318061060982	0	1.42108665328581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40248974-1	3.43989559795261	0	1.40046325740448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89590031-1	4.70030276798815	-0.762574733619973	1.01678622615735	-0.749985310581858	0.453263551869789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.14143228603163
Merged-chr11-94972052-1	2.22224147816973	0	1.4425720111421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29276893-1	3.08910140465386	0	1.66614024041132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142343964-2	2.80145176657159	-0.0344534006208834	1.39076898098303	-0.0247729141877545	0.980236095773205	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr7-142737122-4	11.6124438395967	-0.547253402787965	0.470811547609301	-1.16236189525687	0.245088494534092	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65128799342655	4.01732512990532
Merged-chr19-37702892-2	3.82102273174924	-0.569790105888343	1.01582201666297	-0.560915294748319	0.574855282920305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	1.13341594473881
Merged-chr10-93690257-4	16.0234552467315	-0.429667624049604	0.574106687854574	-0.748410762562729	0.454212432770664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30661755114891	3.81367998413356
Merged-chr4-140714019-3	4.80461500289893	-2.51021089740787	1.19324844730582	-2.10367832707058	0.0354065162501979	0.471846731268573	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	0
Merged-chr14-66171509-2	9.35941121047935	0.115906940700791	0.570511278460252	0.203163276655303	0.839007415210126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0219634810454	2.61485233109839
Merged-chr4-122902330-3	4.06916824346412	0	1.36364366108196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35896347-3	8.72951358081666	0.893829366088903	0.58925988076531	1.5168678460309	0.129300053189987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39460170076552	4.17964248729357
Merged-chr4-57017415-4	11.2344039882883	-0.852924727730832	0.502961255724467	-1.69580602486423	0.0899226211296773	0.850844867186794	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07490433246132	2.79671244268192
Merged-chr15-82807591-2	3.47923963791614	0	1.3719360453749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47405735-2	4.86365682213328	-2.5402359003286	1.23733454145641	-2.05299037181861	0.0400735113084766	0.50770769423298	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0
Merged-chr5-44075648-2	4.31005418471167	0	1.3971227638794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134258580-3	5.97708549204964	0	1.40886349522235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73467240-3	3.87200834688985	0	1.39562128027383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119273532-5	16.1886608621654	0.58330609318772	0.467343449334563	1.2481315272917	0.21198289429765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95364096920676	4.91037861820039
Merged-chr11-107113342-2	3.04290527315449	0	1.43366406561725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100429330-2	3.22547700097543	0	1.40252499105506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25249026-5	11.5270680733342	-0.693741589622838	0.656999390011726	-1.05592425224391	0.291002823021551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33065134414103	2.92218024130493
Merged-chr1-162624060-3	15.9132260865278	-1.92732550248145	0.519410375023808	-3.71060262782218	0.000206766451003072	0.0107146020115119	C57BL6J_F1_Control-BALBCJ_F1_Control	5.27290147134339	3.34810240961007
Merged-chr16-21702876-4	9.2591464579996	0	1.34429222486147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114971163-1	4.36054888911298	1.48156369177959	0.724158098426455	2.04591192862294	0.0407650365097167	0.513902277280077	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64278934829378	4.19459522095312
Merged-chr5-102571621-3	3.18469231383303	0	1.44058297489861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156407014-1	6.03205994739707	-0.262945789273398	0.780446925906745	-0.336916938929448	0.736179515691858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51938584585922	3.23411917105407
Merged-chr1-134072794-1	3.9070970120298	0	1.44670753035783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47247049-1	3.16263138482936	0	1.40503297705447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129649132-1	3.40405321197758	0	1.38269982809833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127353009-1	4.25185212775187	1.21143371558408	0.819833949843807	1.47765741564482	0.139499497992453	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1098084132927	3.72391866424527
Merged-chr9-102852400-3	8.43697238829507	-1.95702135211666	0.761479411122329	-2.57002530013549	0.0101691087987455	0.203753256612976	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99295027612007	1.55668345273989
Merged-chr10-75055845-2	2.85299221311449	0	1.43561426535817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153058555-2	9.38171165827564	1.83513528087263	0.607831142736914	3.01915310329356	0.00253482397041892	0.0746427390075852	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2626815664136	5.10847716780401
Merged-chr3-153636653-2	4.41298507641244	0	1.39717784987084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-70883664-2	5.87931255646341	-2.20226906479453	1.30656656811182	-1.68553912103929	0.0918846036181878	0.862354138135544	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0
Merged-chr4-142166143-2	6.73698479309589	1.98506284182681	0.928051464014539	2.13895771818503	0.032439092855377	0.445404558859672	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	2.28284312426037
Merged-chr14-19889794-3	4.10240705738808	0	1.38100235811865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81190308-3	5.13564690165269	0	1.39988503162936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180434332-4	4.95636104925319	0	1.36011874752188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70769736-2	5.22343891771063	3.67929406866088	1.13305229963229	3.24724116429128	0.00116529603247528	0.0404756083254464	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.18034924692091
Merged-chr5-99269258-1	2.41961719098753	1.67882780351658	1.35911872002681	1.23523263919392	0.216743935188722	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr12-54407690-1	2.0844056667888	0	1.46868561708279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9337666-1	7.03150501987207	-0.188065150048231	0.774172308991594	-0.24292414991334	0.808064156914193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37441905672497	2.67274721467426
Merged-chr1-106882923-2	4.01346283824291	0	1.40392830838329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19707500-1	2.77820054037458	0	1.43584933771341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97647791-1	3.77643776344674	0	1.39115827851023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117176500-2	3.11869539737793	0	1.3969097491269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64753861-2	3.65468464161636	0	1.39883072332911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67176067-2	3.92227706028043	0	1.38936398033204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152152613-2	4.21450259913873	0	1.38745066894033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73774195-1	3.14039705699124	0	1.41866728697763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-48590618-2	3.89008098064125	-1.86132252323395	1.2524778373898	-1.48611214320008	0.137249460861639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0.465515277017237
Merged-chr2-167417838-2	3.07814819474243	0	1.38585156075112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122209094-2	4.12209612986981	0	1.39167570284254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5629298-2	2.71776748591431	0	1.39477573329549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32032942-2	4.20502821410195	0	1.40651480275897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31511966-2	3.37458765310641	0	1.44971208066609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46810260-1	2.5400421843935	0	1.40625420943014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53235494-2	4.11008572285019	0	1.41221035454341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115701949-2	2.94427591668144	0	1.44715279654828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75655420-2	3.11763694052381	0	1.42824955119142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118534105-3	7.56022402039119	0.725016990751397	0.686238104081955	1.05650937544676	0.290735559779415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	2.76938951085507
Merged-chr2-103849038-2	6.88208199157829	-0.456734802015437	0.627752653968943	-0.727571280069863	0.466876066725205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14529268526927	2.60219362730004
Merged-chr3-136078781-2	4.3699444856454	0	1.40029206456395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87870750-4	5.11513726511535	0	1.3884475057819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141860750-3	13.0934591527599	-0.679790517957544	0.730541128990902	-0.930530111147253	0.352096681222536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38016138425524	3.86690210947273
Merged-chr9-116115040-1	4.65479441773204	0.690055129599657	0.885123599540456	0.779614428942945	0.435617860299365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77796484182175	2.28144814127203
Merged-chr2-49727385-4	4.47020280941769	0	1.38880557304393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10984839-2	2.86801989290557	0	1.45400792096757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57344991-2	2.8404961639831	0	1.404019912468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40217987-2	2.93900912716786	0	1.38760705153614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28428996-2	2.99740215679251	0	1.4040424680138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42177098-2	3.54271926224689	0	1.41764782714473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6442038-3	4.47896029706115	0	1.38872092914523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31270087-1	2.83568265763004	-1.347482607936	1.36079044692925	-0.990220508217652	0.322066350624673	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	0
Merged-chr7-35137719-3	4.90106531387824	0	1.38464179626113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-17936700-1	2.64462637310774	0	1.43811627325456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147574690-3	7.12829250638135	2.26565322491837	0.863093126471677	2.62503912431832	0.00866390112728854	0.182897476263409	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	2.74595546447412
Merged-chr13-74765898-2	5.83871162768605	-0.909315466644707	1.0421551708659	-0.872533661075808	0.382917313054279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.969611060640422
Merged-chr11-85686408-2	5.4361146766501	0	1.36675218650748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165855949-2	3.83650096105346	0	1.42898343576089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78143992-3	5.53754428171429	0	1.37195032125285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-9082859-2	3.64199260141014	0	1.38924428296604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38159377-5	12.1813070528138	0.13136084613538	0.547120811406818	0.240094771386251	0.810256787512155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97823708463513	4.13922734224543
Merged-chr9-7789227-2	5.51500228571293	0	1.38133970234787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135658377-4	4.77086956492196	0	1.36510335687559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16466489-2	4.54913061915963	0	1.39602579377758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41582555-4	5.53496975538558	0	1.36233427909938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69017371-1	4.46116764865262	-0.175863367308103	0.81159556088006	-0.216688429292793	0.828451165864588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23468700265025	2.66795166250581
Merged-chr8-80961431-3	4.42207824742013	-0.0358097417964371	1.36861058156395	-0.0261650335594484	0.979125705505447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr5-63953774-2	5.26133545871127	0.611688516430938	1.0143694285064	0.603023414587341	0.546493112821457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	1.19182800327718
Merged-chr17-27038889-1	1.634757668385	0	1.5474688728613	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78410925-1	2.60774396661699	0	1.44340103630692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28416752-1	0.785677136570129	0	1.85522200564707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52919188-3	3.75422427073553	0	1.43540101211031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88189743-1	3.12299548688003	0	1.39769105407522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66873591-1	2.47541722230824	0	1.43638471318602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89553521-1	2.85942773324741	0	1.39956859843494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-91688054-2	5.19515019925771	0.638605032561049	1.5074458987136	0.42363379880234	0.67183290208274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94546104617084	4.08600753689866
Merged-chr13-23729751-1	5.48502115009152	-1.31376126712764	0.92368974961128	-1.42229711619135	0.154940015723211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94575670469938	2.74531872952487
Merged-chr15-39217438-1	1.80370256417668	0	1.43169648326988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79227539-1	2.97011744090045	0.803369107923704	1.37569628447345	0.583972724932668	0.559238662626595	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	1.27743081564928
Merged-chr6-52486817-1	2.81604734732414	0	1.4037874841962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78520714-1	1.99551593482377	0	1.45341169738231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170855068-2	2.21224869252594	0	1.64862278041686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105258382-4	10.3701270109823	-1.00942617286537	1.21286633330287	-0.832264978545912	0.405259393836604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	0.465515277017237
Merged-chr12-102502483-1	10.2439957246018	0.289929897901405	0.49662284843075	0.583802978089989	0.559352874390281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07344070448545	4.37424301332328
Merged-chr1-14590953-1	2.389019481751	0	1.44249350313238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24438064-1	1.98588884616299	0	1.4227015048591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88064347-1	2.42308152541418	0	1.38920649724281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34299061-1	1.21112675876717	-0.191832655807609	1.68703364360198	-0.113710035680159	0.909467656803727	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.465515277017237
Merged-chr1-173802379-1	0.922457202397598	0	1.93943042286712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21826656-2	6.81054062364959	-0.102567762038642	0.962894039311092	-0.106520300106982	0.915169549881206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96698957258076	2.94132707093465
Merged-chr9-103234230-2	2.93008458793676	0	1.39846720819969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55529724-1	3.37977954123116	0	1.38699495920048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74680516-1	7.04761416969745	0.575651105168183	0.912282695236083	0.631000794133462	0.528040005189949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85139442775557	1.87707356607014
Merged-chr14-54239190-3	8.80471669001676	-0.981707461159952	0.731361076782804	-1.34230203428162	0.17949808410982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1751182937794	2.85841089343892
Merged-chr16-59604835-1	3.12780722914989	-0.00451174487295627	1.06134598118472	-0.00425096523936528	0.996608230682281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	1.39949824061849
Merged-chrX-134913375-1	3.02462865015587	-2.40001340799122	1.27151999623872	-1.88751526919804	0.0590910545730398	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chr2-90513064-2	3.36009353668677	-0.760487918007293	1.14245037923999	-0.665663850112425	0.50562598469714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	0.904676873936758
Merged-chr5-135191842-2	3.47930740094828	0	1.40287288319737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119798867-1	2.81211270608091	0	1.39462500240349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25078017-1	2.25570657751137	0	1.41029503528673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139006715-1	2.53561650547153	3.36918885814834	1.44435917970526	2.33265305852514	0.0196663617652121	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.55716820277606
Merged-chr14-76722357-1	4.91304782101625	0.875495788886524	1.17303824130127	0.746348889628118	0.455456685370495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13132003301738	1.06915898720181
Merged-chr7-81841997-2	5.40725075317221	0.321628685294125	0.785279913193447	0.409572026344312	0.682119920858404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90329117160805	2.20527733091653
Merged-chr7-127763808-1	1.9310677638557	0	1.42959826333469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104266575-1	5.83271854785381	0.0254378970965539	0.91783015495516	0.0277152553326129	0.977889256381699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0295486026821	1.97731223551783
Merged-chr17-17893500-2	5.06581529738477	0	1.39198850901033	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95563648-7	17.3599524365281	-0.288878211790127	0.447648740664649	-0.645323409960258	0.518717625189279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3897045867083	3.93046996920345
Merged-chr14-74917853-2	3.49953300152292	0	1.38263775584687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68113381-2	2.46035602152303	0	1.441071105201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84602474-2	5.30255156523456	0	1.38292692103415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166116129-2	3.46027301907642	0	1.37090511823644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140370609-1	2.27553956329568	0	1.4601568790455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171291125-2	8.20218909154721	-1.22574617420759	0.684724738464303	-1.79012982203139	0.0734330436041673	0.754583519334391	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50835595770238	3.11917297130929
Merged-chr1-132054612-4	5.05633978020402	0	1.36741393559772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128359342-4	5.69181188960638	0	1.36671874122193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97361825-2	3.36935415263407	0	1.42853124296352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156461212-2	5.77506901922528	-0.986729328829149	0.786884216570017	-1.25397016238329	0.209852850814351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.779453068074	2.27439318040302
Merged-chr10-128519064-2	3.75064435211652	0	1.38500655533431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-36720798-2	9.69823351982286	1.22927151225011	0.862304010149077	1.4255662710389	0.153993578025154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09717297272874	4.26437207578043
Merged-chr3-98844052-2	4.2167229644561	0	1.40145728601322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-152164200-3	4.47395997463088	0	1.40676393468144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11705925-4	5.42969441131882	0	1.40928245415055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151932368-2	4.12678633262468	0	1.37823288548884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78849391-3	11.069332263572	-0.692678237598413	0.630476526903512	-1.09865824981684	0.271917159744012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59010173332673	2.4179300018393
Merged-chrX-105884679-3	4.39397466120776	0	1.400297059112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56470989-3	5.22229301369178	0	1.37911082248136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65441795-1	4.21858316594055	0	1.40755144216583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47499158-3	4.48726297226509	0	1.37562769898636	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37759091-2	5.25460382634455	0	1.42381489459194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108669649-2	12.8219512673796	-0.526179491370756	0.523644542903276	-1.00484097180394	0.314973431517104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.65024758174149	3.97662741234816
Merged-chr8-70654336-6	15.7782476236407	0.893814029707321	0.480195224939987	1.86135551393504	0.0626939884010628	0.685741166712118	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13165377128288	5.00795887241574
Merged-chr6-97408044-4	5.97116221489067	0	1.35227289916371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127568992-2	4.41095659273198	1.49434340045776	1.03170229574986	1.44842500265218	0.147498226481098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	1.67168202829788
Merged-chr10-68063794-6	15.8919095862201	-0.656318426012212	0.586547356957282	-1.11895214977503	0.263160553234524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01405708810591	2.48496214240764
Merged-chr19-32895834-1	3.98030712193463	1.50196590865809	1.24746303384512	1.20401636594273	0.228583253018579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.02674429890598
Merged-chr2-49472885-1	2.54519846314681	0	1.40940684333202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38534018-2	3.45318073197244	0	1.43269104689648	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62311018-2	2.27823768350279	0	1.46341199662739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40187751-2	6.59585035281125	-0.297588706631231	0.760289115220523	-0.391415187556532	0.695490367973318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93857203456399	1.87043941656813
Merged-chr2-59802917-1	2.23524921117593	0	1.48254273761049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83260603-3	5.27910203261626	-1.26050795076983	1.12582099824727	-1.1196344292141	0.262869577689205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.71701424649985
Merged-chr2-91138766-2	3.59932922939588	0	1.39366206682377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97284000-4	15.3489050426693	0.314754013926652	0.510014587060981	0.617147081499099	0.53713771654119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75461125546933	5.05151042771961
Merged-chr2-128714614-3	10.8575511885777	1.21536214220596	0.672954685644143	1.80600888608515	0.0709169515597388	0.737362998126058	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94792243194202	2.90277675470749
Merged-chr2-129805631-1	5.19827115217436	-1.52623369187947	1.25041312474091	-1.220583550893	0.222243737476641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	0.55634759613363
Merged-chr12-40565011-2	4.07316357949207	0	1.38080033148552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-118855364-1	2.87287422946959	0	1.42339065526014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72847839-1	3.16706628074288	0.597728565416969	1.1577305103891	0.516293351564243	0.605649538996599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.14143228603163
Merged-chr6-134265005-1	4.30353756641021	-0.687917779414408	1.12185816919309	-0.613194963770867	0.53974743440744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10134524129244	2.1596069534694
Merged-chr13-90056829-1	3.60171952509094	-1.6954437854736	1.13872419797362	-1.48889765273336	0.136514321770768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0.465515277017237
Merged-chr11-23597489-1	2.49133365501437	0	1.49755633972401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61151628-1	2.62711342871562	0	1.40718089493825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113553804-2	4.27036308385578	0	1.37926480789742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180771502-3	4.76193311029695	0	1.35952666827545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9938314-2	3.2604988763435	0.623472734662103	1.37679974886142	0.45284198749869	0.650662526904767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr5-53662630-3	5.31932076490885	0	1.39189111876356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21615990-4	4.51764363928359	0	1.36609246433055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6369424-2	6.39567980714748	0	1.35868155273712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154041075-3	3.88016823181708	0	1.38474298144204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33988545-3	3.74137784901084	0	1.38124303823716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62696131-2	3.44780927709698	0	1.37022412193684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105005237-4	4.36167370375361	0	1.37168387339366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31483139-4	4.31084916606884	0	1.37090964086803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22900078-1	2.97952217060292	2.28247858783619	1.35125059569259	1.68916009740317	0.0911887535020021	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.730937814817307
Merged-chr7-143464097-4	4.24148297679966	0	1.38587902768409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-60629118-3	3.97001134200127	0	1.38880716694791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126250584-3	6.01475133662477	1.75787679955637	1.27154312491344	1.38247517139935	0.166825848893712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.904676873936758
Merged-chr14-62860651-2	6.18895204184938	-0.723020474611957	1.02229716985517	-0.707250783756341	0.479410644536639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.723581231604105
Merged-chr9-55307729-2	3.7648301911206	0	1.37547389127605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102771173-2	4.22073385675587	0	1.37405202622043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25483437-4	4.16807712640257	0	1.41051389542567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100849306-3	5.43912783992741	0	1.40428110202637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-29650850-2	5.72512057025996	0	1.38942488122435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19876505-3	5.50605740317208	0	1.37013908631665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35429208-6	17.4514560067605	-0.998809486762288	0.467347730754134	-2.13718698312831	0.0325827863399043	0.446700550479409	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59614378041732	3.00171877558851
Merged-chr11-8533220-1	3.90869841630421	1.57530552140071	0.918546694379261	1.71499775791505	0.086345637997304	0.830002216780805	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05801908341688	3.75115064954696
Merged-chr10-111831289-2	3.34975377579801	0	1.3837762707118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41303017-1	0.854566907791632	0	1.84439960986523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23819342-1	2.95745854268546	0	1.46136573379886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36557721-2	6.11483175164409	0.488241547167559	0.724013679450104	0.674354036429786	0.500086257258603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58707500045288	2.87192679893945
Merged-chr12-79353534-1	1.17992680980978	0	1.8582492461398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73514340-1	3.07023024967944	0	1.49437626309211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62153537-3	6.55938392132872	0	1.36862392899151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-70398276-3	3.73745223649221	0	1.38753690107167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17405255-2	4.80302120118921	2.64745465122388	1.21211684919271	2.18415794895279	0.0289506437099644	0.414903253738454	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr15-63123293-1	3.46323163358952	0	1.40398048345922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73737091-1	2.76848130755584	0	1.44112463139853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150759715-1	2.43764823095429	0	1.41548881088776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96408022-2	3.03593924462351	0	1.40573077601898	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70661363-1	3.01698218359281	-0.352285405859906	1.04442493333118	-0.337300838592867	0.735890127599977	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.27743081564928
Merged-chr13-107903397-1	6.13426327834114	0.70360572602119	1.0578231795361	0.665144931244321	0.505957798735638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	1.49169296430729
Merged-chr7-67217311-1	2.66166827358207	0	1.40291624524266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35164271-2	2.67790281841628	0	1.48037741816331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92718380-2	2.04805592538433	0	1.61681685003114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3499449-1	2.09961200287607	0	1.4308768649711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69411010-2	3.25749043957843	0	1.45812870515451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44391627-1	2.54972766662185	0	1.49230869987137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62641991-1	1.96025005459799	0	1.50048224127106	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65202100-2	4.04916265224549	0	1.3878680544794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32555569-1	2.86123179774889	-0.0351710480648957	1.36034308580294	-0.0258545424547339	0.979373357779496	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.600815099743027
Merged-chr3-135713423-1	1.66805893549614	0	1.74700282876709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106340895-1	3.66713608024796	-2.48615928941748	1.22517085901282	-2.02923475622061	0.0424343850755916	0.527243597331219	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31383855713236	0.67591700901439
Merged-chr15-6403610-1	2.14574715357595	0	1.44087649681333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91111321-1	2.0314056251941	0	1.51701012455814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84880538-1	1.84088764311872	0	1.49784166036003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50607458-2	2.553562547022	0	1.51495591616668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55845234-1	1.8269002235873	0	1.65107396100492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150157828-3	10.7847570121963	0.364744215796142	0.538650996772903	0.677143861203917	0.498314682333556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45361094406118	3.56001547490144
Merged-chr12-71342580-3	12.2632695796521	-1.77264866410137	0.601685756621006	-2.9461369902727	0.00321769859265894	0.0899747313777506	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02534054658317	3.3030580120372
Merged-chr8-122618116-5	12.006647377804	-0.100836239900603	0.454825661735986	-0.221703057641315	0.824545049693766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77719567465888	3.83205951481432
Merged-chr12-33403666-2	6.42698869536282	1.00736073208325	1.02163655551417	0.986026514660358	0.324120101854988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.01161228884919
Merged-chr16-44190303-3	4.67803836505918	0	1.39578092605955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20732491-3	9.12072200273274	-0.814374205058207	0.515352795598754	-1.58022661759706	0.114054978160591	0.986305211236326	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32029138384526	3.52981472879947
Merged-chr12-104228358-2	9.82193484431728	-1.00890704523877	0.546272716223808	-1.84689261476025	0.0647627053084871	0.698915207040709	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71098546673723	3.87136857183212
Merged-chr14-9426931-2	4.39961283297061	-1.7143720575117	1.05054452901622	-1.63188899676354	0.102702872400884	0.927225617146595	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48012756866106	0.841757702988201
Merged-chr16-11704331-2	3.41819698303955	0	1.44370297514215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75584907-2	4.16510791935873	0	1.37061923434339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83584317-2	4.16501221718321	0	1.39489661998498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132806358-3	4.51895250328515	0	1.42598420257794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25179685-1	4.1573801584177	0	1.38191133751941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116468280-3	5.12021983997739	0	1.36213893432711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41317816-3	8.34015181998843	0.685650580044058	0.712820382158685	0.961884083571871	0.336107834587667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04415279089395	2.83340875970969
Merged-chr13-98807862-5	8.86150150685045	0.478039193695324	0.671421402735258	0.711980868866963	0.476476622852878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17343914874612	3.23211434677695
Merged-chr18-60908271-2	4.55497150266127	-0.181562427159945	0.910122872570741	-0.199492214328273	0.841877733025259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96027510505613	1.79973735522865
Merged-chr10-8342708-3	7.84914891684887	0	1.34550058991017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110446819-2	3.31123450223039	0	1.39948896287738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80260567-2	3.25443707237549	0	1.42123760243989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93485496-2	3.24510978550332	0	1.42523708792215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91840284-2	2.76636907968892	0	1.4857053064123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38709351-2	3.86283214818959	0	1.40252763736994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109596839-2	4.40513264376804	0.924302555566467	1.13888138491608	0.811588079152401	0.41702803380798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.44790810950236
Merged-chr9-31285023-2	2.61351187284446	0	1.55448823040677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100047285-2	5.00682528981854	1.08598475560054	1.1168515724829	0.972362650827682	0.330870165833525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.20027794713453
Merged-chr6-134947581-3	3.15232689705078	0	1.44369729270563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83693997-3	5.66616691590828	0	1.36544039950892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148649471-1	4.8579997163256	-1.20171984478028	0.858019024455097	-1.40057482471727	0.16134125362509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26800305630894	1.64434148891112
Merged-chr11-17538469-3	3.168607272287	0	1.4368401590229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108353077-1	3.8649089509841	-2.30049075545103	0.97616136074815	-2.35667057512693	0.0184395967415812	0.304113231795661	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94922890105279	0.977756232605852
Merged-chr16-91524333-3	10.5609238538418	-0.510512187466769	0.566805875877983	-0.900682595564107	0.367757105057355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79603832150636	3.13632282772653
Merged-chr13-37959176-3	15.5198412451095	1.19961353222614	0.569622009979325	2.10598170578008	0.0352059414922661	0.469864908808763	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06205865679497	3.66747996867402
Merged-chr10-4338983-3	4.62806446610476	0.623648624698053	1.3749307554136	0.453585478572303	0.650127207254788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr4-85703996-1	1.76213095572903	0	1.68715648957092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124455541-1	3.26072737512477	0	1.49697129942036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36182547-2	4.85375689529006	3.83643520883948	1.03782047141994	3.69662703183189	0.000218482957697748	0.0111859502187425	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	3.82917923743954
Merged-chr3-132176978-2	3.40524739203641	0	1.42333711873232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11187752-4	6.0113163967139	0	1.35686378454483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170706289-3	5.83746015862414	0	1.36788319381332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114870231-2	3.31979637112737	0	1.414085653999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32192592-3	3.72356066407674	0	1.39895839823056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58578892-4	4.81565989062229	0	1.38301720683396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83077536-3	8.17183487205314	0.789430818539977	0.596927877275297	1.32248944737406	0.186005221016727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48853090112376	3.69061614472398
Merged-chr2-158180951-2	2.66914056826101	0	1.47354793491495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122989186-1	2.75977897896677	0	1.39316201570633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8838840-2	2.31526446424628	0	1.41121750597168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86976700-2	3.80166996058751	0	1.39103012535298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111843651-2	3.38316170096524	0	1.42716508051748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95302789-1	5.61619097540685	1.45780107963849	0.838977878941866	1.73759179619502	0.0822827664022224	0.80794958433136	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82339894246671	4.4194086681909
Merged-chr6-125083173-1	1.54698591369411	0	1.51686340959047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103174993-2	3.86027335685943	0	1.38230976228181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72963622-2	2.84210947892037	0	1.43148901432429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115107722-2	1.93533449510305	0	1.61607242976061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31564142-3	4.64484461290581	0	1.40199924890479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41242206-2	3.62867240500069	0	1.45389367881955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87734923-4	9.38150088151616	-0.73987064346003	0.54086000714528	-1.36795221256079	0.171327034793956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36354523199154	3.36901910288328
Merged-chrX-61653265-3	4.09418242290406	0	1.38512536951632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132838278-2	5.12814567832582	0	1.37475477077382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160010838-2	3.69980430994489	0	1.38312296909585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83485476-2	3.53998552444045	0	1.39044767101384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60672488-1	5.80289788799397	1.31466583170068	0.602425485698587	2.1822878727917	0.029088293470756	0.416217569038385	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05231067795763	4.43334169018782
Merged-chr7-24474089-1	3.03809061967772	0	1.40270591162424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103421528-3	6.46706144571786	0	1.35783464445436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70743431-1	1.96810786702659	0	1.42837088376725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86503615-3	4.1855697047741	0	1.36760214429929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61549023-4	10.855704607422	0.216879266757807	0.474129847038101	0.457425888947208	0.647364959711242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93325161960326	4.22895663791038
Merged-chr19-32112061-3	4.27620473231333	0	1.37085971508877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136467520-3	5.82777330353144	0.17726365229065	1.144479793231	0.154885785960636	0.876911359575177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.13759034240505
Merged-chr10-91209480-2	3.8020663510164	0	1.43135181376717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24633901-2	4.64689663584802	0	1.37351313190358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102886705-1	3.86402725818882	0.520857063665391	1.3403131834504	0.388608476061196	0.697565795700956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	0.67591700901439
Merged-chr7-102015029-2	3.03665926418909	0	1.40167446590704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27338631-3	4.07011923271472	0	1.38717007373546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6553823-2	2.64259630815123	0	1.45908415669874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-23651482-2	2.74429673013712	0	1.45591962040669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62922843-3	3.71618657368596	0	1.37563278231607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5052576-4	5.20349978017502	0	1.37477128214434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99084377-2	3.05574985511071	0	1.38464304379168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73105580-2	3.08863775570201	0	1.39009606042057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-53608380-4	5.27763615214543	0	1.40566318825043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101174550-2	3.33794026808792	0	1.40087750237425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-68223381-2	6.63252788185448	0.0262315452219402	0.635578923422289	0.0412718928448663	0.967079140231942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1211594341346	3.19827110988615
Merged-chr15-99121047-2	3.81881528186569	0	1.40242445064563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36867755-4	12.0469525174726	-0.411548091577794	0.513804564085835	-0.800981774675404	0.423142196921954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9692163300066	3.52826180469691
Merged-chr16-49906409-3	6.03669585747266	0	1.35642248119413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36899157-2	3.51610338763446	0	1.38218223058487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151625899-2	3.80792206256149	0	1.3693500135505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136034664-6	15.3296231814847	0.547074756061781	0.606205754449002	0.902457213655177	0.366814040259231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9013449633325	3.11257444067825
Merged-chr1-161550851-3	4.58215504320749	0	1.39001893529416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60895590-4	8.49780747931427	0.511583661722099	0.714650676210376	0.715851364522464	0.474083132245419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13732213527118	2.06433119728902
Merged-chr7-66137773-1	1.4748545190247	0	1.51875459977376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99278454-1	1.82395029701747	0	1.49639287435082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40671394-1	5.95036692702486	-1.39072024483103	0.858039831208641	-1.62081082281699	0.105058216676765	0.940506872711811	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06279728427368	1.79061031525623
Merged-chr3-123481814-1	1.87179449066698	0	1.51429582032838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64291044-3	3.68912503603303	0	1.40726988035801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131447150-1	1.72960814510015	0	1.48893885713692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72217016-1	1.72620137513707	0	1.47644290234935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52372966-2	2.92707323940751	0	1.42311179397946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142606211-1	2.44246555555113	0	1.39707020866734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51719611-2	3.44293116580669	0	1.39974241165773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12772735-1	1.57315183913114	0	1.55565279133342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133191068-1	3.48250286339258	-0.408586384426733	1.00109127271761	-0.40814099129799	0.683170167197119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81534621159246	1.10718024078827
Merged-chr3-52990240-1	2.92661051090294	0	1.4689713620287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89395886-1	7.41498231414098	-0.0951541795320581	0.787378700954519	-0.120849318652772	0.903810385699931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63767395945907	1.93932353539148
Merged-chr6-97877588-1	2.29673796836417	0	1.43764551866813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14237507-1	3.05223151416068	0	1.40794183524429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47248444-1	1.19636339018593	0	1.74001835658064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135724372-3	3.73382892283735	0	1.41903740638925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20085431-1	2.32649351348909	0	1.45121254221625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88009407-1	3.78984822099318	0.464471368055101	0.898716047361571	0.516816595651858	0.605284193971798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0995156753045	2.36364322001306
Merged-chr6-115698876-1	3.03705373757638	0	1.42130244631352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63308785-1	2.79529007384963	0	1.51393899612117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-119871977-2	3.19345533234867	0	1.38844916487999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15802160-1	1.93529569510041	0	1.60054113333492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97759500-2	3.17334505631007	-1.88868139670417	1.29214534553155	-1.46166327436426	0.143833505913223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr12-32460504-1	1.65581989829513	0	1.58849547630829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64326464-4	7.08285427456225	0	1.39376335797644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7041179-2	4.29542624931878	0	1.39412922090058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-42959172-3	7.25602898780077	-1.3492363341646	0.633460981381052	-2.1299438699808	0.033176247685905	0.451986879187496	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15074029567055	2.46364017180079
Merged-chr6-95018131-1	4.98320251850928	-0.826109561695573	0.7383037591035	-1.11892910134806	0.263170386706841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04407911235788	2.10096446834979
Merged-chr17-80756251-1	2.42379803593041	0	1.4001902906478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5637487-1	1.30115118822752	0	1.51674316005189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95719560-1	4.64849843183668	1.61864527847023	0.909523923981983	1.77966212409636	0.075131272594642	0.76466220688488	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	2.59905678997413
Merged-chr9-64086747-2	3.46874190635685	0	1.38610179039365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85182850-2	7.27367515454284	1.34220773699878	0.840572242238844	1.59677856292737	0.110315076061967	0.966884427547959	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03836655801536	4.42647213187884
Merged-chr9-61369041-1	4.17023967686225	0	1.37212114883001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99422491-1	2.60817818942501	0	1.43824655807425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4308995-1	2.33779134277554	0	1.45296512716838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46149963-3	4.05608108950154	0	1.44052929302796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169781986-1	1.64814406624159	0	1.47879126831784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60973281-1	5.11447276013659	-0.927596292165155	0.89070124488884	-1.04142247188721	0.297679517563452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51862090621193	2.80634359403483
Merged-chr7-113167341-1	4.57372684672414	-1.29885217255861	0.902976033183093	-1.4384126763365	0.150316998019207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14114930166338	1.55081194879892
Merged-chr1-123544579-1	4.97458841155197	-2.37955513936119	0.733303821284941	-3.2449785072599	0.00117459488704615	0.0407465242277868	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87036888594876	1.25298535761957
Merged-chr12-33168671-4	5.1446846640329	0	1.37735646653043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83253255-3	3.92204929590314	0	1.38474498411887	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118600251-3	7.54365324002781	0.857845071127952	0.710273139014712	1.20776786282239	0.227136566262313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16523349939429	3.33038334930622
Merged-chr1-184169430-2	3.86697241386408	0	1.40348506640234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30767918-4	5.27157148926822	0	1.38423551615817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75667749-4	6.518676860697	0	1.38834517632272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21855496-2	7.52809458420065	1.18723237219851	0.662151088110894	1.79299316049705	0.0729740177055544	0.751286861450043	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67801301452722	3.94261403547321
Merged-chr4-99152781-2	7.68907505902825	1.19047599577319	0.834148842881039	1.42717454556605	0.1535295895801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42436654726916	2.17954990019872
Merged-chr3-142589048-2	4.69061631067778	0	1.41520138637079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72161312-2	3.78627310799431	0	1.39468810922374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25058893-2	3.1238327366627	-2.62021550348167	1.25122423434456	-2.09412144646817	0.0362491630543921	0.477110957499685	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0
Merged-chrX-142718116-2	4.3206638039562	0	1.41335785338476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116817856-4	6.05184892053358	0	1.37136737382897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26907314-3	4.92533460549277	0	1.37292436918167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60382604-6	18.6418577369875	0.0728669194303952	0.486215867931737	0.149865366879851	0.880870836298064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94109852586247	3.87387926334423
Merged-chr2-76366235-2	4.8713057644645	1.77331810030991	1.28245584246709	1.38275178106604	0.166740988625128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.18909650862134
Merged-chr8-47947808-1	3.51874688326616	0	1.4054930065359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73487761-1	2.44851909707666	0	1.43203161012807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137826578-3	4.0124664558144	0	1.38994483831262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77542119-2	5.97876396364427	-0.0284575160829904	0.88340630432813	-0.0322133948371962	0.974301874188083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95563186934823	2.96445831975608
Merged-chr8-108918559-2	3.69974862514089	0	1.4361157452438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136087022-2	4.80788199597069	0	1.37204264207412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64784984-4	5.87800023572967	0	1.36085414064297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118977883-2	3.2573616894036	0	1.50086522901578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76474649-7	13.9938923413376	-0.164668246456925	0.478956193290764	-0.343806487448337	0.730991821047328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31396691912144	4.15597574382483
Merged-chr4-44065884-3	4.62628814639884	0	1.35984952701967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131433729-3	9.26650795831118	0.131574468482052	0.571860925647719	0.230081235805759	0.818028645440397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68443244860422	3.40892938853688
Merged-chr8-127837033-3	7.85660689428877	2.26107251257971	1.0388368231202	2.17654251587699	0.0295147181821243	0.418946781962249	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.40167209460162
Merged-chr7-67380348-3	5.03066609322738	0	1.36199349882907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116416731-5	11.7895563595584	0.543222495790517	0.58343884211373	0.931070159508898	0.351817273274305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88753781266324	4.13152088934135
Merged-chr15-64447416-2	4.27404871911385	0	1.39907542282708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77610425-2	3.58905728775444	0	1.38688013093698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83011808-4	5.57621969662817	0	1.36330377778251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-116237744-2	4.43405611412427	0	1.372954570808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167013120-4	6.79813874160077	0	1.38450158905292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110236347-3	4.70121046794021	0	1.36380350943022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79807891-3	4.74650823965226	0	1.38836416729417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58233933-1	2.60409150037428	0	1.50791912322967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-142689025-2	2.29651766008814	0	1.43349775002516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95191888-2	3.01185364517507	0	1.42962342784297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134041935-1	5.82306225662742	0.767016936359652	0.868012705811721	0.883647130075563	0.376886728821132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	2.02788781170559
Merged-chr1-87281798-1	2.58603059847	0	1.38557244876143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105881974-2	3.38950456903905	0	1.42508942721873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14190824-2	2.68749259758837	0	1.44363958812678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180225330-2	1.70914147107761	0	1.65700314699709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122957573-2	3.83273317643964	0	1.377364214551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63606109-2	3.8224468842652	0	1.42796836911333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-168455487-2	3.32522950959495	0	1.39143936875116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6509049-1	1.93151821384959	0	1.54480250904051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103799849-2	2.20225479362552	0	1.50112840837848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119166183-4	6.56677880500787	-0.0378379387138017	0.803518911757763	-0.0470902901725463	0.962441266073784	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09197273807469	2.06645909458177
Merged-chr19-17126135-2	6.20216128763417	0.24847946534731	0.878990175792735	0.282687420394902	0.777416460165828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85139442775557	2.16080982730713
Merged-chr7-65714512-2	2.49522292666472	0	1.53491798647133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67346059-2	4.09999233204891	0	1.41861875770117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37544571-2	3.82489769069529	0	1.39564737327484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56949139-2	2.45463712193345	0	1.415527287877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67397473-2	8.91972361370965	-0.692134602225482	0.649402501488852	-1.06580218067941	0.286513074944929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31372888123416	2.32141208096419
Merged-chr14-32482289-3	4.05489898377359	0	1.37594206645946	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16104207-4	11.2835454932919	0.105281301519514	0.710142951599862	0.148253673830499	0.882142574186512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96491903277391	2.02852485995372
Merged-chr14-60988360-3	4.01732070779752	0	1.38509688526495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30125199-2	4.31042221851492	0	1.39111543847295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33875973-2	3.45477779358856	0	1.39502636454473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94982331-2	9.10789728083932	0.0698872271550717	0.78700070094107	0.0888019884499502	0.929239277382009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41316001406225	1.85514990253484
Merged-chr13-11904826-2	2.9697378620992	0	1.4002720305866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130841200-2	4.54879352615154	0	1.39137233089127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43827093-2	5.39442374562823	-4.65226068370398	1.06770295711169	-4.35726121456954	1.31700055568458e-05	0.00110309450241076	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30403190892704	0
Merged-chr1-125447853-2	3.68701359438979	0	1.41268491641777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80918025-3	3.66522423377298	0.622684299793328	1.38513240122262	0.449548576904056	0.653035974023292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr3-9897243-3	10.1873762683439	1.5995145550529	0.657315239467915	2.43340555491711	0.0149575370029524	0.266510663828228	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40120643282281	3.69572919938619
Merged-chr12-25367706-3	9.73827608169035	2.81078708704348	0.967414234673462	2.90546385023188	0.00366709206229326	0.0987985019752941	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.44253562405569
Merged-chr17-48118764-4	7.83849580130492	-1.81247206328837	0.744338948849942	-2.43500903195885	0.0148914179927756	0.265578277778638	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71297889537955	1.97731223551783
Merged-chr15-6080940-2	4.4566213905245	0	1.40187015178692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145123676-1	1.78168185615737	0	1.83251861532412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105554092-1	3.7782127590405	-0.236897341115141	0.986816676721149	-0.240062158153092	0.810282069898056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22816961775725	2.16776583147382
Merged-chr4-59009892-1	3.74907380008255	2.76481461457286	1.17187396337741	2.35931055811198	0.0183089263619158	0.302509096689174	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr13-43806865-1	1.89984585391394	0	1.4992428910327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65490004-6	11.4432533166695	-2.46835694370203	0.733022341358162	-3.36736932073393	0.000758889831814638	0.0290014164058887	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6650179427205	1.48018155595824
Merged-chr7-101296862-4	6.21976070136597	0	1.35183432885027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136137747-2	3.98448218536968	0	1.40617994144429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77141803-5	13.6187966137877	0.0699210657491815	0.469398964800195	0.148958713147022	0.881586211555275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37672894932799	3.69162288686909
Merged-chr15-59156509-3	5.57061537373944	0	1.39888126205895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47541744-6	17.7713331271509	-0.668316297669755	0.478779275128293	-1.3958755785548	0.16275196595275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72742451115054	3.72865664500268
Merged-chr3-116327464-5	11.0201051294172	-0.130749248488832	0.431219599816576	-0.303208037260939	0.76173132430907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13536836139706	4.02212070875969
Merged-chr8-11174050-2	3.37191858250352	0	1.37840910896817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45205940-4	9.21126369172796	-0.945708421380299	0.845099603632268	-1.11904965676899	0.263118955269638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86395361846286	2.48496214240764
Merged-chrX-23554710-2	3.09642654849659	0	1.40712678828146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120683759-2	4.32222403113571	0	1.3877862176454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-3004667-1	3.08240906542698	0	1.43251633773038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82838632-3	6.12790303264671	-0.599891150630255	1.03940638053598	-0.577147843099552	0.563839587147524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.953310774576147
Merged-chr17-67246710-6	13.3558153110418	0.93722670315349	0.515914093739919	1.81663326225385	0.0692732868015645	0.727781932438156	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30855146344708	4.37044422657242
Merged-chr1-138822452-3	5.04640373503138	0	1.37339386857477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34257137-3	3.85829041400324	0	1.39363399623762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68244640-4	6.21427125716389	0	1.36245243242135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52564473-2	4.47098506457092	0	1.42432255947747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96790535-2	2.45364926213543	-2.13712133307996	1.35825049955606	-1.57343680990986	0.115617709258001	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr1-162039359-2	6.72616901947059	-0.170069245721574	0.825188284425292	-0.206097503965437	0.836714748467385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	1.71465869101023
Merged-chr6-49008142-5	11.736674713439	-0.0821451643873942	0.478737155515463	-0.171587192347641	0.863762077137001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50964703073345	3.55332643169079
Merged-chr1-133134484-3	5.87690789207956	0	1.3625332864112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21011303-3	4.70628284910759	1.81521813260458	1.31503201265889	1.38036041338215	0.16747570237905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chrX-96147900-3	5.40900564399563	0	1.39093264612717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90487662-3	4.44940742953199	0.027637872257197	1.06234889077824	0.0260158150463644	0.979244724137617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.815775955292901
Merged-chr18-67825457-2	3.01184298941943	0	1.421101516721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126869832-3	4.14275285502763	0	1.37120329444714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8251737-2	4.45128338847885	0	1.37826227417148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124011533-11	32.9348370985663	-0.237788264975639	0.39731427326923	-0.598489107927184	0.54951362448673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.80022342554482	5.57488732255102
Merged-chr10-44068816-1	2.12861064405543	0	1.4972885716909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144936874-2	8.29511849371284	0.196118234584675	0.607215424664974	0.322979665236406	0.746710642246214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31802764184134	4.49379578531315
Merged-chr12-35298911-1	3.02496808815821	0	1.40052118396156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46365363-1	1.1251153320691	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27886661-1	1.27731531749898	0	2.34455240301406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105285424-1	2.29125555813852	0	1.46676557939261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25481425-1	7.64453339442619	0	1.38493312077857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-14004371-2	2.14335845222663	0	1.61775698687903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154881500-1	3.72564008040504	-1.36333627209445	0.897637247217444	-1.51880537078939	0.128811493621295	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48762807179304	1.98728899046489
Merged-chr11-74483510-1	1.36150149553137	0	1.62906686977605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5682194-2	4.56474906289633	-1.65244901629173	0.884399869700229	-1.8684410444925	0.0617006205211378	0.678394828258197	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26087918380575	1.02748994520012
Merged-chr8-95420610-1	2.29420210262004	0	1.40692495443843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63612930-1	3.40696977922371	1.1666876854202	1.45593429455991	0.801332649268255	0.422939094360423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr4-129129585-1	2.56754015669352	0	1.43574748932298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7053617-1	2.39707171823434	0	1.46430714367166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35292674-1	2.29346796759973	0	1.51601408931285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-4736901-1	1.85303589789386	0	1.47915097122234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143532281-1	1.9380285979758	0	1.42093476932354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82380684-2	3.38696092599091	-1.20487679314671	1.47347013368051	-0.817713753136691	0.413520655447622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.303163067301871
Merged-chr11-3178443-1	1.70460157944897	0	2.44142181830716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24698635-1	1.55092466412613	0	1.54122670207679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17514469-1	3.35332319952666	-0.246909076725697	1.13878535343117	-0.216817924450606	0.828350242529923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16448544747254	1.98209264290658
Merged-chr16-38305147-1	1.60642036690382	0	1.59001541270225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-74013925-1	2.58210013258533	0	1.39754639535157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-45410950-1	1.66585029593589	0	1.50907628392062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5633200-2	2.93185901365553	0	1.40854149050104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62349130-1	2.73269190682915	0	1.46441072952173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16160891-1	2.39235420650175	0	1.39469868545335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72201027-1	1.99883659263479	0	1.5006169877862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25137752-1	5.35083742877698	1.05177158359861	0.754943754723974	1.39317873287548	0.163565749193668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	2.69570282591091
Merged-chr4-89276538-1	7.48616570587183	0.545501154216092	0.654983918338871	0.832846637822128	0.404931228060256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22221276223304	2.72224053280659
Merged-chr2-145877589-1	2.49435412112504	2.41887512092147	1.4176488869552	1.70625825843005	0.0879600060915645	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.788686275880602
Merged-chr6-43462938-1	1.82387786644841	0	1.55670891822435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142295469-2	7.80986734583928	1.02203975838183	0.595397195496013	1.71656797531669	0.0860581380187875	0.827970676913853	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52648357102452	4.46091468102902
Merged-chr19-10692518-1	1.97611487084023	0	1.6049227579385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41494859-2	4.20191493020919	0	1.43256113133782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124349093-1	2.65433475180803	0.347624803062221	1.28765925833489	0.269966453323797	0.787186062028289	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78348390616087	2.35414229678733
Merged-chr19-22304553-1	2.31010459472659	0	1.40376819244257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89485338-3	7.58238837928822	-0.225070725020285	0.808713732846933	-0.278307039782747	0.780776672548448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09608820392312	2.46067151507303
Merged-chr13-54956175-1	5.1612138264548	2.25842573386654	1.03605007617181	2.17984225454756	0.029269156573778	0.417267789717807	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.51010240258394
Merged-chr8-10854955-1	1.74965438401872	0	1.47126756015981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156803421-3	4.81634469877788	-1.25737735725486	1.41827884217468	-0.886551586235958	0.37532036906742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr12-73683318-2	2.62644110339644	0	1.47003904755853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50436069-3	5.22820206292762	0	1.56294471555613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114781077-6	10.0279917701172	0.626856745509779	0.774470862231606	0.809400038244844	0.418285080217807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.086211388454
Merged-chr12-16874327-7	15.8944872073913	-0.205286200547647	0.4453028834405	-0.461003528568162	0.644796073532848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46190602780287	4.25495792680507
Merged-chr10-60333856-2	5.03408289343897	0	1.46692483260269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37618262-2	4.21265724775095	-0.621658117922635	0.964693903076472	-0.644409709587805	0.519309789936098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.39234354082305
Merged-chr10-12884781-5	12.5035705091226	-0.864154577997342	0.494756990188474	-1.746624292601	0.0807025305145625	0.798793557647715	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22459940150703	3.39476830454081
Merged-chr11-76771439-3	4.7902215016143	0	1.39721160001853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134005128-2	3.19588230849117	0	1.53940930893766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139236034-2	7.60420437660029	1.53911019115418	0.642868606897425	2.3941287140807	0.0166599011984025	0.285773294176068	C57BL6J_F1_Control-BALBCJ_F1_Control	2.700856479496	4.36472683003003
Merged-chr17-27615889-2	9.41170745948016	1.1630729774006	0.625250311720803	1.86017176736723	0.0628612280609848	0.686987031798768	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31790783580067	3.59703186809181
Merged-chr15-18823615-3	4.45277925215423	0	1.37256732809114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71012245-5	7.83008784271578	-0.994942481385729	0.945425605413542	-1.05237522200441	0.292627432174826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.09982365757507
Merged-chr10-89708962-2	9.0602543245379	1.92913397059652	0.546987540251595	3.52683348090377	0.000420561173977968	0.0189720206276086	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69894930911201	4.64032596376878
Merged-chr12-102338400-1	5.32669356579137	-0.180869069690451	0.738548674969051	-0.244897967893627	0.806535435176658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50794861036089	2.34407075892003
Merged-chr2-163838270-6	10.1925850599128	0.0241936312676498	0.845365908889029	0.0286191234035505	0.977168360060322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	0.993299420549897
Merged-chr4-136878823-3	8.73446002182185	-0.60442049926777	0.609157637679921	-0.99222346053118	0.321088530568818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43335120402952	2.33295635203545
Merged-chr4-86925210-4	12.1217067519737	-0.565805632003833	0.50735583400771	-1.11520474207306	0.26476269443787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31507696902589	3.16439509295939
Merged-chr6-5365962-2	2.68201165382699	0	1.45736033173967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95596993-2	2.72658949001261	0	1.43284707997302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126903669-2	5.41478477833079	-0.303007657783579	0.868517487200883	-0.348879167373051	0.727180025732272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31260716574699	1.65345633230702
Merged-chr10-30755267-3	8.95964378809998	0	1.35996376281682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95884208-4	14.4527983002762	-0.736874679624037	0.524809786541117	-1.4040795322827	0.160295167742818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.15311204424778	4.56869048589373
Merged-chr15-73350523-2	4.04359952294178	0	1.38951204083172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99491206-1	3.40496609155111	0	1.43094783733293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14295577-3	5.0524262858609	0	1.39282553691019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124012881-3	4.80918942837221	0	1.37356103059489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52220149-1	3.60862841047836	0.504582098006215	1.06071307022346	0.475700839530445	0.634287522746418	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.41478649953382
Merged-chr3-96500173-2	10.2630095359286	0.618153215422563	0.555740089076635	1.11230632371623	0.266006465858562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1143152953673	3.56065391695089
Merged-chr13-59002394-4	6.56656427634603	-0.164518903225353	0.788972786609786	-0.208522912345672	0.834820694352672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89255009218154	1.86575916392988
Merged-chr19-11786795-2	5.29223818136478	-0.525006415456065	0.9032396749275	-0.581248178118621	0.561073201365461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	1.40373237117109
Merged-chr13-20039821-2	5.71837376520495	-0.29770699018503	0.677746134210489	-0.439260329432687	0.660472915486177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11413112565287	2.62255259766379
Merged-chr4-8974961-2	7.31062978491977	-0.283957675063585	0.70840024662088	-0.400843557604735	0.688535307509187	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6702610769639	1.94965252358293
Merged-chr3-101897094-2	6.05805031433321	-0.889834559433848	0.824129240267723	-1.07972696023354	0.280263784623285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18824411835354	1.92385917873864
Merged-chr5-25166837-3	4.53509340570077	0	1.39138993083656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53405190-3	6.00073079605945	0	1.37148184408871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135095334-1	2.35963696002667	0	1.43842303373044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88951492-1	4.39209457952359	1.55377226561709	1.03302729474493	1.50409604230325	0.132556639208323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.86083742891534
Merged-chr2-84560731-2	3.47877834365593	0	1.42047954041849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25621520-1	2.03935945633638	0	1.44724932344875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106658571-1	2.18700424852897	0	1.43992555289961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127480025-1	2.6233431258056	0	1.41050171369539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111220737-4	4.15564230859167	0	1.38121204749356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26699272-1	9.88397864946745	0.392190902445344	0.585336428520754	0.67002647253047	0.502840914783058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22113040178686	4.72222645829315
Merged-chr3-132747229-2	3.42885396800782	0	1.41841301427919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50674514-3	4.3200113949851	0	1.37935251481985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101541303-3	4.69302762197159	0	1.40220271825403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124536916-2	5.09460901768394	0	1.35797740890954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128466814-6	16.9248061414286	0.577712560415024	0.622984644567852	0.927330337035462	0.353755047795113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70938678277374	3.37141979325728
Merged-chr6-106458887-2	4.66021133748688	-2.46783281237005	1.13695713727555	-2.17055923346734	0.0299645065122623	0.422855817627224	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	0.41385117919798
Merged-chr1-106328089-2	3.46536067445872	0	1.3737659958729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16101581-3	6.1078282964681	0	1.42640697279694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77716273-4	13.3762188804537	2.18637294049116	0.712990014612172	3.06648465712445	0.00216591923853196	0.0661816772835068	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	3.70577846674246
Merged-chr7-17066566-4	7.56272709510288	-0.00308680481671536	0.990717570052146	-0.00311572632809257	0.99751401408935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.788686275880602
Merged-chr11-70633000-3	4.09238432969146	0	1.37468973683861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81132859-3	5.26490328961227	0	1.41290038921587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64222811-3	7.37019344340201	0.566629379877513	0.737721728683736	0.768080101000291	0.442439598150659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	2.62791396414752
Merged-chr4-136364113-3	10.5512962085753	-1.07200234044891	0.749050113455055	-1.43114902620361	0.152387508952604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46935039169561	1.737158151675
Merged-chr12-30265282-5	8.46275170930175	-1.12137658291968	0.693612793803504	-1.61671842407994	0.105939075080169	0.945606269668786	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67984507500062	3.01905864107165
Merged-chr6-131805061-1	6.71775816910124	-0.745454985648521	0.692089021301283	-1.0771085260779	0.281431784487475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63769527841779	3.95695346035685
Merged-chr3-138114382-2	3.22611867668106	-1.84712854462517	1.39250697314111	-1.32647705200252	0.184681731377148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr8-72269031-2	10.8355121675934	-0.816032716207895	0.506070955490594	-1.61248676169692	0.106856058391635	0.949891819805539	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38131406170376	3.72897311928453
Merged-chr10-24382093-2	6.94839953863624	-0.536546030490963	0.700205599889293	-0.766269265164109	0.443516102007516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39582461268914	1.92385917873864
Merged-chr1-77213780-2	5.61664668689113	0	1.37813183803233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64098646-2	5.48118069620976	-0.0853870420617026	0.829356204113383	-0.102955812759591	0.917998040829123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8133278414847	1.97731223551783
Merged-chr5-20934796-4	4.80425905668032	0	1.37923842219883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43348777-2	3.42041391999371	0	1.40128783375741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71661624-3	6.11696631704891	-1.85178733662694	0.819513103331436	-2.25961894825009	0.0238449105668138	0.363382532520727	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1459315008481	1.40298672487694
Merged-chr15-97945519-3	5.47634602617504	0	1.37689498824113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17364949-4	11.9416272311744	-1.75764389346777	0.490520295610791	-3.5832235876788	0.000339379869782697	0.0160980369472231	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54877365001676	2.33860409010381
Merged-chr6-15739339-2	4.34155346274552	0	1.37559593979007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127538486-1	4.65623644032017	0	1.43168756582554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34490323-3	4.34299325521342	0	1.39677749112661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-133947585-2	3.36341935733033	0	1.38806544940974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89005861-3	8.73261463585757	-0.685710224834016	0.731235673482614	-0.937741756454828	0.34837713929422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66828971316851	2.5323898788085
Merged-chr18-62250687-3	4.82788070601051	0	1.41476419364797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100336118-4	6.13310641628258	0	1.36738433067026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21439598-1	1.68724157109926	0	1.55171746490929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20531871-1	2.97273072887087	0	1.39919590734966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3231798-1	2.88913336934224	0	1.40175726508455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-11411541-1	3.38645706819476	0.211686293680633	0.954326362921406	0.221817505944837	0.824455951143904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42491520061759	3.32158293033714
Merged-chr11-105467400-1	2.78210308331856	0	1.40268068964533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117146842-2	3.94080888426066	0	1.38605887295989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155050239-1	8.1169887829924	-0.970084208002242	0.507816992800112	-1.91030277000614	0.0560942413381449	0.638447836034384	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21984608400296	3.24704630389786
Merged-chr16-38404404-1	2.13310746672148	0	1.46438755242285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167380591-1	1.87640854788321	0	1.45191207309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-71326999-1	2.34609491427343	0	1.49314140744754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105849019-1	1.58028389592003	0	1.5887813410781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8763732-1	4.27169233829596	3.13044102221943	1.16044655709108	2.69761757065881	0.00698376188564683	0.156032761859249	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.16046810178831
Merged-chr12-91816215-1	2.87926727868727	0	1.39153347648644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95884953-2	4.37783902776778	0	1.43804575132689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68233134-1	7.93266070812276	-0.137643420967257	0.643738416876719	-0.213818870147712	0.830688308994157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67799089413632	3.57819272726941
Merged-chr6-127542241-1	2.41017837332487	0	1.44332439361308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43303344-2	4.20373572992503	0	1.386867463985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77089389-1	2.01858931276894	0	1.55464459392595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99986937-1	2.84326066158182	0	1.43087457664439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151051355-3	4.73645592271259	0	1.39656920016453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70867496-1	3.16713159339744	-1.23884556288594	1.03676710702767	-1.19491210175217	0.232121374157413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22905223993991	2.20145723341397
Merged-chr3-22087934-1	3.03117400074551	0	1.43813595608226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66287746-1	1.25221171526374	0	1.69840487496251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46462384-2	2.7181748317514	0	1.41570244592583	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72177114-1	1.92453225112321	0	1.46944298363891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27702601-1	4.17259452596823	0	1.38174256978327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-131913412-1	1.300716576126	0	1.59632843631176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72872435-1	1.32415792222276	0	1.6147841595655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41852169-1	1.96794981525556	0	1.51954027346489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-18871845-1	2.51901028312117	-0.562106614798742	0.990303715383925	-0.567610326071353	0.570299593962074	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91272544031057	1.43881745552618
Merged-chr15-76759330-1	4.28712328026978	-0.0748094543323604	1.36226987100945	-0.0549152968324302	0.956205945158563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	0.716426531808663
Merged-chr15-27925523-1	2.28851005202087	0	1.45426070467739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49108257-2	2.97976472827695	0	1.46996227567227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48833844-4	6.91950045854013	0	1.35569533358364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35252515-2	7.29328228001939	1.51021254293377	0.998488170659635	1.51249918357677	0.130406920175908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.67279875369265
Merged-chr2-50652250-3	3.87278189544855	0	1.37678370335316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33122860-4	5.53686811683214	0	1.3647786423904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40689374-4	5.04168120306382	0	1.36128968794007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64718969-4	8.95535321947371	0.323125986343717	0.705274917420343	0.458156072706516	0.646840316430563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29675716151532	2.85494397016221
Merged-chr18-60753019-3	7.60055563997972	0.424036882312491	0.627435056472203	0.675825932801185	0.499151167754045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94640134381309	1.99782898882713
Merged-chr5-146768961-4	5.34142822530877	0	1.37075353324714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4710267-2	4.55493461815771	0	1.38891712705939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156571647-2	6.00393149575384	0.906858380612451	0.752072139625976	1.2058130235531	0.227889592737637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83635135426376	3.60363523493164
Merged-chrX-93911392-2	9.75525063331373	-0.384898013505857	0.49316671544846	-0.780462268537022	0.43511882831888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82999919083869	3.50753144744606
Merged-chr7-118646482-2	5.85191255450567	1.06601842767867	0.794262208802802	1.34214924978678	0.179547607852716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68598010415578	2.44577178472098
Merged-chr6-120451664-3	5.14838915761805	0	1.3869373486022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-18948874-1	2.20663144120016	0	1.45958457036112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76414560-1	2.15083658589479	0.509780819820139	1.52903098777306	0.333401235093739	0.73883143097254	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.465515277017237
Merged-chr14-51483242-1	2.74042561511999	1.26966207905299	1.41472854796389	0.897459856083573	0.369473585256182	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr16-3733401-3	4.26710811158291	0	1.37296367405998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125872542-1	5.63244753069148	-0.506092176205886	0.914626600222314	-0.553332011208588	0.580036085089209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52242786274935	1.60294768781932
Merged-chr1-64633322-1	2.43492112236748	0	1.4200636985909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96503244-1	4.11055295594253	1.23706170350123	0.99880814102556	1.23853786597197	0.21551669068903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41555302647945	1.67735121185591
Merged-chr2-104338163-1	1.97853596880919	0	1.46244413401256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125495993-2	4.54388295702895	-0.536784222033147	1.16161562170836	-0.462101414617439	0.644008595793944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17347279658369	0.577068348605183
Merged-chr7-4145983-2	3.69499132365165	0	1.40770915461681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81202628-4	12.6005273760322	-0.0381152068604893	0.593775515152673	-0.0641912741226607	0.948817925308177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08388963161166	3.04953698397451
Merged-chr18-66477531-3	4.37365879660532	0	1.39091354870811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9555970-2	4.68751505887917	0	1.38707986210024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11060136-4	4.52694849996216	0	1.37182313849957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95853091-4	5.04850076163098	0	1.35946095505713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54979325-1	2.98771940276598	0	1.38190531067005	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114896700-1	2.63646680129013	0	1.45624327904331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11104955-1	2.29903329322423	0	1.47413057158779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134699173-2	2.94970347155251	0	1.42661660222698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107621685-1	3.10361329701483	-0.260867121808681	1.00199645386239	-0.260347350335541	0.794595851204827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85139442775557	1.46573328458049
Merged-chr17-64666121-1	1.85112781568138	0	1.46069988921626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4270981-2	3.3887450966876	0	1.38577066824742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-29289107-2	5.7940081362118	-0.963990031593389	0.727330688327594	-1.3253806653064	0.18504492651019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04845038512503	2.16517866554277
Merged-chr7-25435631-1	3.19389435576462	0	1.38563324091596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108127867-2	5.24063031904669	-0.288417203567361	0.847737578154428	-0.340219911207972	0.733690924636209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24553328998514	2.35608495136228
Merged-chr18-52457904-2	4.9436461117456	0.790316847306329	0.8557452819876	0.92354216136687	0.355724739400717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62635771927786	2.13795322910058
Merged-chr13-115150809-2	7.22949812991336	-0.351315966436257	0.608621042246857	-0.577232698263763	0.56378227112582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29398433573242	2.90196142678535
Merged-chr6-5379256-3	5.53490585460397	0	1.37950899200612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100916937-6	14.6583575271693	0.0141024959888393	0.421253702363305	0.0334774410520831	0.973293855179111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63338437051633	4.47193608825235
Merged-chr14-61173411-3	9.23536077402562	0.290086308740653	0.729392672196806	0.397709381788773	0.690844421034457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	2.6518013600863
Merged-chr6-37592545-3	5.1114442188888	0	1.36538659808615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33348195-3	4.13762576784364	0	1.36734739755658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46592218-3	11.3978933810265	0.0626656390851738	0.681071811367513	0.0920103255475343	0.9266898357939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77469492713894	2.65209657670461
Merged-chr11-32629950-4	7.93143381614352	0.934861042535831	0.705469309279045	1.32516188902847	0.185117462751385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02938698498506	2.97055275650852
Merged-chr5-33033420-3	4.41236078021142	0	1.42160377314939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138038557-4	10.1371367150839	0.9616913413758	0.619219941943158	1.55306907325682	0.120406633656782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43227213747251	3.10007440524458
Merged-chr6-50681869-1	3.43623790814281	0	1.40914311309981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-15563416-1	2.93009246863921	-0.700092482372444	1.24126541246344	-0.564015137570799	0.572743830161763	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52861812840328	0.723581231604105
Merged-chr8-40602980-1	2.79271189042884	1.96731624636873	1.29603671113467	1.51794793269888	0.129027525036494	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.21849460895724
Merged-chr10-122748534-3	4.19222099096522	0	1.40352432059629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47738933-4	6.22138974845857	-0.0688115008393584	0.825593312338819	-0.0833479387622735	0.933574883248755	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	1.40167209460162
Merged-chr15-83452119-1	2.19589515407175	0	1.39965251078139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37063938-7	16.9999639604967	-0.249010896773676	0.418157319044919	-0.595495727164174	0.551512154410935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.79980727895914	4.62980285057003
Merged-chr13-24442499-4	5.83216416924717	0	1.38039832456258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80305107-3	3.81093987168592	0	1.38131768371584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109563029-4	7.81313846484793	0.977276336964415	0.890164957547857	1.09785981651819	0.272265706934636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94890237030247	3.34352937810446
Merged-chr3-122104593-2	4.46540133463899	3.34807465837221	1.16020196538226	2.88576882152504	0.00390458848104185	0.103435441150562	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.85314874973115
Merged-chr7-143907632-2	6.215015403333	-0.117959390301926	0.612796231213334	-0.192493661503706	0.847355532460538	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14523635789572	2.97338046569586
Merged-chr10-41826708-4	4.54432822659914	0	1.36378032141199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30744612-3	4.12008446631618	0	1.38594319912358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146564516-2	4.24560339994793	0	1.39597298981805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109547922-2	3.04897385792005	0	1.41359103355926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79323341-2	3.52705930507453	0	1.41701346231392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39265281-2	4.05245052371013	0	1.4132956061613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149943854-3	5.80328799240713	0	1.37886299892942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137730276-5	11.8483605596837	1.19062658561404	0.613017245064162	1.94223995360754	0.052108058405565	0.60660611080403	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21307952544685	3.66317963537405
Merged-chr9-114394915-3	6.42931191762889	1.58563722856552	0.989466753659299	1.60251693419858	0.109041345880991	0.960677231887325	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	2.23558145226682
Merged-chr14-118941227-2	4.57303286387995	0	1.36961116011152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113573385-1	1.85131638129871	0	1.45678589040193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62111106-1	2.00539120095842	0	1.48833870178251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21326068-4	5.86716980927564	0	1.36298896333712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-95324447-1	2.42353925782086	0.651349172333515	2.04717996488595	0.318168985387565	0.750356757358594	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07721457594951	2.08234459672809
Merged-chr7-110432435-1	2.41755525317325	0	1.40933753760695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60333355-1	2.41064108680713	0	1.51074866808501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43916159-4	4.36879292749186	0	1.38045046706745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5726526-1	6.63308219957012	0	1.38603726214511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148682117-1	1.9212842336891	0	1.4833574328884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87218177-1	2.94665510614037	0	1.43781086333252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83162480-1	2.22249344033209	0	1.40275369159359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96148377-1	1.71477426427547	0	1.48791853109946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90496448-1	1.57059837400412	0	1.58711988773113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153565726-1	1.60149868685493	0	1.49543688111839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46850348-1	2.10049385737931	0	1.42731138103688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19173174-2	5.45156289232037	0.859689845636345	0.798355618665459	1.0768256971416	0.281558142824806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	2.41387450741157
Merged-chr4-106827954-1	1.87812678829152	0	1.45090930427891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14893577-1	3.19156430357805	0	1.38635324283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61069385-3	4.45638284139344	0	1.38425437644768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105353190-1	1.66040853282857	0	1.43316537715475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37802877-2	2.91989138532791	0	1.45300380569012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-107032037-1	2.05584493813681	0	1.4830438104958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28557401-1	1.56764251076078	0	1.58833600853236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118041644-1	1.0979935883598	0	1.61558014786703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102492608-2	3.64122739850302	0	1.4094613806773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64223400-2	2.59021832212448	0	1.48860115525918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132007264-1	2.96587751361895	0	1.41607200449737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64242114-1	2.36390171113295	0	1.40952883585671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43469277-1	4.64364269805263	1.11352892456379	1.00286077434774	1.1103524567386	0.266847176832413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.03321995648104
Merged-chr8-67989412-2	2.15529609944166	0	1.72980347110132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67078456-1	2.66927144528399	0.161944111068306	1.22072630581617	0.132662096570477	0.89446062039593	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.18909650862134
Merged-chr10-60375700-1	1.96940818911759	0	1.4514558040876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73459385-3	5.43404115720201	0	1.35714639576507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105857893-1	6.26882514538205	-1.80859956882435	0.817639289720499	-2.21197732491867	0.0269682317231094	0.395032634933038	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43526289253616	1.86501351763573
Merged-chr12-35890277-1	4.73065423069657	2.10797842632257	0.862950493175156	2.44275707933886	0.0145755444714875	0.261921329562178	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	3.77079633800918
Merged-chr1-171961017-1	3.53368338606484	1.1650995757589	1.35467803687075	0.860056444445084	0.389757929020767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	1.88304801148673
Merged-chr10-117818283-2	2.89361043965806	0	1.43815932785357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53447689-1	1.67537763453543	0	1.51588060865495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156030047-3	7.50419994240342	-0.905016220323718	0.852047709534766	-1.06216613247851	0.288160271870346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6670833183559	1.63234578815522
Merged-chrX-169263591-1	1.59513838236251	0	1.53175682849444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65038445-1	4.08210278332126	-0.379478633325408	1.17889732131415	-0.321892862477956	0.747533860572744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0.904676873936758
Merged-chr6-38810635-1	2.34084435748589	0	1.59230032985704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108768710-1	1.19809470211462	0	1.70730879314141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48153567-2	4.25722300915749	0	1.37860516269713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54715893-5	15.1816011163297	-0.476685526663223	0.546148248588483	-0.872813430959844	0.382764777683275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.93981361060229	4.22645988565851
Merged-chr14-27045242-3	4.3167485868361	0	1.38128294342046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40805462-4	7.62874042597595	-0.264581117942386	0.707132786795405	-0.374160444661912	0.708284950738323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.162043158134	2.13274325121821
Merged-chr8-40576953-2	5.55164286080512	-0.699644716003331	1.03836422033052	-0.673795092612711	0.50044159522086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.723581231604105
Merged-chr4-10919229-4	6.25078565587183	-0.27505116164202	0.804557447934482	-0.341866404130807	0.732451433583056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87757319456894	1.85699717634292
Merged-chr10-99166161-3	5.54839066978343	0	1.37607230560171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153953951-2	3.57071080319789	0	1.39654979123622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95662926-2	4.4353448652634	0	1.39216145243781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-59078640-3	4.16541111909144	0	1.39031321477549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58534967-3	3.3183580219517	0	1.39049962055786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39655662-4	4.35659205939179	0	1.37838630224534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177463029-2	3.73319629698505	0	1.55346296038359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-64976176-4	8.75274891904876	1.01887938703396	0.584133878216722	1.74425662511555	0.0811143513930345	0.801081218582669	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1690188381782	4.13889013649225
Merged-chr3-10022628-3	6.94583589524691	2.92248335650359	1.20977779976613	2.4157191155835	0.0157041705193294	0.274666346608825	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.48914397899119
Merged-chr4-129130317-3	4.62284619240394	0	1.36514941256145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73358823-3	4.80330275278199	0	1.38266885006808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88275685-4	11.6793597810641	0.336594782704969	0.555941594197618	0.60544990016581	0.544880103675891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47225664660216	3.85483895145999
Merged-chr17-73416543-2	3.42130435797032	0	1.37984219985111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49500989-3	3.59497978467393	0	1.47893278888426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102867094-3	3.67598105906439	0	1.39405614119858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33007823-3	3.40737046546252	0	1.45321135129172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172095712-2	8.02483821744444	0.386323704865827	0.782813022329861	0.49350699828169	0.621654396203768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2758534078984	2.7673232737206
Merged-chr7-127761193-2	4.67188232359332	0	1.3639234646408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92693370-2	3.6251034583645	0	1.397267786717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80014518-2	3.60301749217322	0	1.41206719724601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-39616641-4	10.4982846185313	-1.16948566698982	0.731273024546994	-1.59924628385449	0.10976588989223	0.964275773779112	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69687992955905	1.46573328458049
Merged-chr10-94572115-1	2.45018939161878	0	1.39917311351917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55044859-2	5.16863739368117	-0.416872601667404	0.986099138589847	-0.422749179421803	0.67247827000506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31996877971892	0.94927122251658
Merged-chr6-40423968-2	2.74683740389897	0	1.42966956083666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78797332-2	3.61110537134993	-0.263829965881877	1.05740265961901	-0.249507567889925	0.802968187653762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	1.03838943879457
Merged-chr11-45960170-1	6.83128659962267	0.66454389863539	0.62775751626274	1.05859966853388	0.289782137935958	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65030055987329	3.33904889601156
Merged-chr2-5577866-1	3.27745932311143	-0.839644547170091	1.08951059069468	-0.770662125124203	0.440907227142106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75733238011489	0.990919527803163
Merged-chr17-87143317-1	2.56767154302905	-0.543135727425939	1.37532803428212	-0.394913587077021	0.692906662282849	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.55634759613363
Merged-chr5-74813749-1	4.02651196299112	1.06197348837961	0.992451461411965	1.07005080819644	0.284596439554725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.58767400493002
Merged-chr9-40556616-1	4.03095159567058	-0.694063680577935	1.38571292110753	-0.500871190566085	0.616461779131542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr14-49154019-1	6.2412087009029	0.0876765540066519	0.624148293998254	0.140473914372178	0.888285561428178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05205408291954	2.9691837716218
Merged-chr1-131613520-3	9.86977154135691	0.0828506210456275	0.523883260644888	0.158147105031835	0.874340883171549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84964215546198	3.61761588917123
Merged-chr5-111103581-2	5.37872791429853	-2.47973489569051	0.841582862588695	-2.94651306000088	0.00321378847412467	0.089911645735946	C57BL6J_F1_Control-BALBCJ_F1_Control	4.55691192241413	1.97731223551783
Merged-chr8-109002110-1	1.78736027820821	0	1.44085932512967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118970805-2	6.56218477956351	1.18930384366696	0.804073713815342	1.47909802700015	0.139114117452645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.82454569995389
Merged-chr3-95296253-3	4.5865581979054	0	1.36961056726166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70495108-3	9.0881393045097	-0.365283831824151	0.504723123625491	-0.723731120540446	0.469230823481788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96388315126942	3.53225472413653
Merged-chr15-74933709-4	8.30673392253322	0.271968477547778	0.737952600008276	0.368544643036325	0.712467163610125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24448401666942	3.17033931441393
Merged-chr12-40486647-2	4.07173738655827	0	1.38956553292611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68927163-3	7.05975713448562	0.496460240463434	0.780707254669487	0.635910884001725	0.52483450821536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63476526644182	2.54444516623674
Merged-chr6-72517735-4	4.70152015931392	0	1.37761108155452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13056343-4	4.85649387765997	0	1.38517599192417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20882842-5	10.5325974631628	0.0952476085086091	0.545679146982773	0.174548741756511	0.86143422825957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37002884585273	3.40070913386105
Merged-chr19-58087308-4	8.23762574443388	-0.436065136037091	0.845477565212578	-0.515761924359815	0.606020698761493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92251444403217	2.63532600506344
Merged-chr17-78829636-3	6.33861176838584	2.15463577692315	0.76099898826345	2.83132541587196	0.00463555322430305	0.116821528845568	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	3.58909912000649
Merged-chr6-141075439-2	3.69191253618977	0	1.42249168640809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30975367-6	10.7865562086701	-0.052278203288684	0.586755538445029	-0.0890970768290102	0.929004760509668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4707788411593	2.45914805170659
Merged-chr15-68363880-5	18.6660013749252	-0.0586198638843134	0.418873197787354	-0.139946561856823	0.888702212209083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06952140586314	4.07359041207904
Merged-chr11-75472840-2	4.11138060145894	0	1.37156687041262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109437528-2	6.85213377287683	1.20606807701735	0.707985626407463	1.7035205688247	0.0884706920918006	0.842385418009842	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58722329158898	3.70343384501075
Merged-chr5-135134741-3	5.73902130086789	0	1.36925750899835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81134683-2	5.15178112319469	-2.12811439389353	1.30893334366926	-1.625838629741	0.103983988234218	0.933674531949764	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr8-127861115-3	8.75811481684951	-0.543969453532495	0.741728794903917	-0.733380525698697	0.463326373474578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39543092688359	2.11005512232597
Merged-chr1-155982830-3	6.73249836772605	1.80000001336526	0.861014335705281	2.09055754210043	0.0365677451219404	0.480353563243548	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	3.7221912849089
Merged-chr3-123356535-3	8.89559452845235	-0.437438371440995	0.695315912875424	-0.629121760829553	0.529269345136464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01442870895611	1.96616486270068
Merged-chr19-47169196-5	18.8729554596627	-0.626455767003915	0.499171959387755	-1.25498989921685	0.209482426751541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80831985532449	4.11810850118878
Merged-chr16-21778685-1	3.65692977718498	0	1.45501380070911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-175655422-1	3.39408232830807	0.908687438467926	1.12835796710564	0.805318405114653	0.42063596352889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	2.33008424732248
Merged-chr6-43857234-1	2.20063348888115	0	1.42897542208442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91387053-1	2.84921467941752	0	1.44079104089453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85160374-3	4.78631130387024	0	1.3665653869065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122895244-2	3.68974245930441	0	1.37375599297932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-57252811-2	2.81369784931147	-3.05994406346532	1.25595019741399	-2.43635780285378	0.0148360012826632	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0
Merged-chr7-81847048-1	3.70032570549727	-0.839593110349279	1.07295050412982	-0.782508705776884	0.433915671066233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36155420913382	1.25243428981845
Merged-chr19-55806976-1	2.22106320919534	0	1.41711189193446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30511214-1	1.68045731426321	0	1.54933757431051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102089710-2	1.88833256845674	0	1.60741108516502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31413109-2	3.78518743998966	0	1.37689996860752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-49899090-1	6.50252539627038	-0.129814600088641	0.770838723194173	-0.168406952300891	0.866263139073202	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78585253285087	3.32463446129248
Merged-chr3-53027551-1	2.31967833678025	0	1.42989546097749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20926102-1	1.98169948007551	-1.90749135860401	1.33424170469354	-1.42964453284132	0.152819067315289	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr2-165391742-1	2.46767124946118	0	1.40995474801337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84991454-1	3.11041067190799	0	1.38126579632133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53454749-1	2.982291334858	0	1.39566280911039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54227770-3	13.092650114358	1.01581936337887	0.582844799029278	1.7428642497466	0.0813573300914843	0.802086235453064	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44857545836358	3.22597972559135
Merged-chr14-76909713-1	1.38661217977839	0	1.56872191665785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136808766-2	6.28333438547138	-0.349471738721478	0.707154518227495	-0.494194309324983	0.621168958316483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57131936519212	3.5558328929698
Merged-chr4-19580798-3	9.65810919302449	0.187039123413861	0.565675307770557	0.330647494851809	0.74091076643264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67838616097772	2.81064271494382
Merged-chr7-142089034-1	1.7562126574781	0	1.59335101861482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172513587-2	5.83490189809251	0.57307899011643	0.729287860963867	0.78580629240012	0.43198097961737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00259395741298	2.91672342845487
Merged-chr19-38352905-1	1.70528487656254	0	1.46644433826969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166009194-1	1.56619602853919	0	1.55463369389907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54762804-1	5.15034706100089	1.29532653718331	0.931604632867379	1.39042517768126	0.164399805368219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	3.07680710213495
Merged-chr13-64309245-1	1.34547236084622	0	1.47700601873926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156984118-2	3.62643678804877	0.347905717084188	1.02669424515372	0.338860102436921	0.734715121698162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.39949824061849
Merged-chr6-142989744-2	2.9087609040993	0	1.42975971495676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47214291-1	1.14713956133735	0	1.60829880945001	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75744224-3	4.52239324879129	0	1.38467255209367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47655069-1	3.06253865478454	-0.25663861152623	1.07148295955187	-0.239517212325585	0.810704551322396	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.18984215491549
Merged-chr19-5432263-1	1.30208068218009	0	1.85248543314676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85630052-1	3.43524996331997	-2.84820977912473	1.26580418587794	-2.25011878685585	0.0244414058108	0.368853519841554	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0
Merged-chr4-10984550-2	6.15790433831361	0.0175771194984221	1.01590231295148	0.0173019780291233	0.98619570760123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23966551990137	2.93959853314363
Merged-chr17-81663143-1	2.07847620269606	0	1.46266072478571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63898004-4	10.8512329079448	-0.100032569512918	0.596902839960474	-0.167586017046831	0.866908972394994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41041824439107	2.38010611739581
Merged-chr19-44578243-1	3.24924417862916	-0.311393151523531	0.83087497195543	-0.374777387734619	0.707826032573456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08223402230804	2.38136366697246
Merged-chr16-93027682-2	3.51972722000324	0	1.4433514365481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12214581-2	3.84578331863622	0	1.40471082184497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48576937-3	9.11514092659933	-0.0248232428038005	0.666121853795208	-0.0372653181431758	0.970273458386897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05487363448977	3.25582400776629
Merged-chr8-72273958-2	7.94076796130887	-2.50021056074181	0.80056977087554	-3.1230389301453	0.0017899407049747	0.0570872474402579	C57BL6J_F1_Control-BALBCJ_F1_Control	4.388170160719	1.79264310302021
Merged-chrX-166329059-2	3.43691132393703	0	1.39047634506613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7320002-3	5.37396808063264	1.76272680146298	1.2966181873808	1.35948023760467	0.173994460625603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.904676873936758
Merged-chr13-110431608-3	7.47432301056157	-0.481073909074772	0.913035009030936	-0.526895359232027	0.598266256753625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	1.14143228603163
Merged-chr17-84340716-3	5.35566673242236	0	1.38220477459444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118737275-4	5.10858535870289	0	1.37810586114227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134784638-2	2.95987694760409	0	1.42333383883365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31119585-7	20.6028564655871	-0.16964840457843	0.349759540942769	-0.485042964435357	0.627645868936957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.44544917231052	5.26099138829892
Merged-chr17-29049305-4	11.0500553943687	0.165972979573631	0.627298922817787	0.264583555839839	0.791330289342379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76834798724332	3.16738789621377
Merged-chr18-11860596-4	8.51161921673202	-1.19436273063681	1.10694679458363	-1.0789703140936	0.280600961484908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0.55634759613363
Merged-chr5-147071237-1	2.79032843135464	0	1.41606228483772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63855488-3	3.97455523847829	0	1.36643275057129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52618738-3	6.22789241036547	1.09965491636954	0.90867932602834	1.21016830125971	0.226214318852102	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68089718199588	3.088083232785
Merged-chr3-9029160-1	6.78542310901241	-0.251229224462768	0.915569353584355	-0.274396716621448	0.783779765973648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09010984099742	3.77290695266325
Merged-chr4-105252779-3	7.40213832130814	0.647327564733259	0.677056747777478	0.956090559407598	0.339026483955401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16596752412581	3.04937921300849
Merged-chr12-24734074-2	5.24186098168621	-0.590661266393563	0.866365818185666	-0.681768894842273	0.495385095716292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65768825040625	1.72158795009891
Merged-chr16-43432235-2	3.69577656925094	0	1.37268777125972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34303598-2	3.42460783449692	0	1.41639666521449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36499999-2	4.03391877156396	0	1.38734067752808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12755978-4	8.0606441529447	0	1.35238658074334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40692042-4	13.6871304995441	-1.40618155474932	0.509910007428469	-2.75770534851991	0.00582086400959985	0.13746942293508	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30402059083239	2.98752927425295
Merged-chr6-134537567-2	5.77498658886203	1.81755750248419	1.18162765264013	1.53818125229482	0.124004303594078	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.49792997957569
Merged-chr1-157407724-1	3.56062606433683	-1.99104232151417	1.07051616239522	-1.85989001516738	0.062901088293894	0.687284474083977	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	0.71701424649985
Merged-chr6-89258913-2	3.6103522320754	0	1.37047218680513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11705249-2	3.76398451936517	0	1.39381709419833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109821872-1	1.27647345486088	0	1.8395929518799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22701138-1	2.24289541406089	0	1.42761997743501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52199531-2	4.02468939574547	0	1.45765224145586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59349919-1	1.68519606452562	0	1.5112783219403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72410120-1	2.25578860421309	0	1.42162552675303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69157183-2	5.80448399709372	-0.29855617891127	0.826985454573225	-0.361017448686982	0.718086403315534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12297233384676	3.88428663607383
Merged-chr8-107576939-3	3.70740057565512	0	1.38295570946785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75704614-4	5.99908561139458	0	1.36453257598335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101653919-2	6.85919138093855	-0.790267237764206	0.560588979254224	-1.40970883661597	0.158625674408766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13154031238104	3.45807775892362
Merged-chr11-119447153-2	4.72321650685361	0.2318141440651	1.07312110651739	0.216018623300971	0.828973230974312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45327344926554	1.61881475415901
Merged-chr14-34644046-2	3.02599638488978	0	1.3981763352284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70235368-2	5.13599488696319	-0.270900318369233	0.85556373667417	-0.316633707995038	0.751521555529387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6995072319729	1.2636608194585
Merged-chr15-25566868-2	2.64255847877454	0	1.43459350153182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85492474-2	3.85811843516028	0	1.4191547950821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23115615-1	3.45338969047145	-3.52434146932633	1.10716946817545	-3.18319965518398	0.00145657139318515	0.048249704059812	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36947549187724	0.827114643704772
Merged-chr3-90016876-2	2.67581324127801	0	1.47450718727399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138705420-4	8.1283350546445	-1.18800336427046	0.937424265261624	-1.26730596624667	0.205045908027273	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	0.953310774576147
Merged-chr12-84004708-4	5.88174156831235	0	1.36441835247953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120766497-1	2.24018145679826	0	1.51299236325238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36205911-2	7.30785102212904	2.8234240457837	0.82328484541426	3.42946194322696	0.000604779239740367	0.0247367905891999	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	3.50149823387071
Merged-chr6-117921492-4	4.27977524910372	0	1.37598679721411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126464617-2	3.96188378058788	-1.08453969894668	1.2747464361753	-0.850788571098653	0.394886811497684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0.723581231604105
Merged-chr11-75415242-2	3.0182151538845	0	1.42411824943585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60744302-2	4.63148203995776	0	1.36163902632221	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86924005-2	3.86258315234295	0	1.3784642071308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35174262-3	5.10391728627338	0	1.36325275398733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118896385-3	6.99946406868813	-0.75639681862394	0.763676379176265	-0.990467741636612	0.32194554887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63357992545343	2.07776144459665
Merged-chr6-8274615-2	4.04385272995749	0	1.38341445103057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131281649-3	11.5905064401627	0.949857063858197	0.532900848441714	1.78242738144578	0.0746795636171859	0.761936733017825	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64264230873039	4.63521923941229
Merged-chr11-70280642-2	4.33224834899884	0	1.38387579069228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12030958-4	9.13723881572824	-1.20688652783886	0.5886327211316	-2.05032184673444	0.0403330340669604	0.50987520903393	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78683844338055	1.75847184294284
Merged-chr16-65174748-2	3.08892506094951	0	1.42521877596651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47939991-2	4.0245475828681	0	1.39463427580096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106151940-3	4.78561550084467	0	1.35743139111214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117569027-3	5.32745183793633	1.07151134205886	0.812020851198127	1.31956136406825	0.186981509557117	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03415454436003	2.65209657670461
Merged-chr5-16506876-3	6.32771238391707	0	1.41464048558568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75392591-2	3.52434734466734	0	1.37873991380645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121445375-4	6.16840319247038	-0.338514210986727	0.83099083683892	-0.407362146464131	0.683742024674569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.38572824442771
Merged-chr4-53135666-2	4.99257390690325	-0.251693073690824	0.989923975611913	-0.254254952795989	0.79929859888545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69757189012738	1.49518144856574
Merged-chr16-49967257-2	4.09032515843187	0	1.39287448276177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85134392-2	4.02878756339593	0	1.37144856779601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88726824-2	4.79366034706478	0	1.37692079040087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152597606-1	2.69005127324612	0	1.52241406206113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155476458-1	2.69146803064412	0	1.42377670427629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50540346-1	2.90457581360662	0	1.43476464626297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39504393-1	2.48886761096902	0	1.4497380131554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56270049-1	1.3507172870944	0	1.53716375380097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161809710-1	4.70242020529806	0.625739302783429	0.846680699452095	0.739049919513174	0.459876685419994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25143168552214	3.09755092295921
Merged-chr16-91852407-1	4.1065845027009	0	1.37376294930368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99390650-1	2.94169270014342	0	1.44881537906365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39202133-1	2.15299852225443	0.843298619030917	1.43244041465401	0.588714623242884	0.556052726626568	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.788686275880602
Merged-chr7-115132589-1	3.20854566556644	-0.568406464833857	1.27522703968307	-0.44572962080158	0.65579256536047	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	0.788686275880602
Merged-chr3-88194832-1	1.39968561622455	0	1.63944649202953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-69238400-2	2.90600279417758	0	1.39257565018047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36510198-1	3.94925666926842	2.68766582777469	1.16477066028322	2.30746353717493	0.021028992704965	0.331400894478479	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.25298535761957
Merged-chr19-11803617-1	2.4975361573624	0	1.45683914574374	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16995154-1	1.90499819619306	0	1.48445389021868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36676757-2	3.81673754647012	2.4593055455432	1.31939420527438	1.86396570161664	0.0623265210460148	0.683661405573015	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18909650862134
Merged-chr16-24785873-2	3.23737806078677	0	1.3707746502707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170565083-1	2.2212932807609	0	1.45645743527965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94477376-1	5.79206390425746	-0.316728531962089	0.729906005569414	-0.433930573999049	0.664338856980935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12818529348344	2.89913892395021
Merged-chr19-55265456-1	1.67550089097628	0	1.53045770974065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87507871-1	1.40189499969048	0	1.54659314644464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-5223619-2	4.02079952784945	0	1.41929808691644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50110924-1	3.33163694791548	-1.77827347162195	1.02366302452052	-1.73716684985754	0.0823577244131685	0.808393561100655	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9187417491456	1.82011828833849
Merged-chr2-118968274-1	2.79686480737888	-3.96545595167754	1.53284364572204	-2.58699311097032	0.00968175278315204	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52879699405213	0
Merged-chr1-138300512-1	1.98653225498489	0	1.52118502948989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119147920-2	2.94536931318019	0	1.45083930250078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81120292-1	3.79948980374003	-2.62188029437435	1.22855324584571	-2.13412019645067	0.0328329430401978	0.449336845599726	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	0.303163067301871
Merged-chrX-139986843-1	2.57015227704248	0	1.42242387893416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56836055-1	1.49848194697632	0	1.47892184279084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81679835-1	1.52644632848489	0	1.56776785430902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16293407-1	2.20320275250031	0	1.42259747146479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79294965-3	3.00032394775597	0	1.40092112041379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9709085-1	3.15514772470564	0	1.42162321947328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6405441-3	4.25776522199547	0	1.36437719822288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19849250-1	2.7818560760949	0	1.43627186717165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167743170-1	1.87282315966301	0	1.57772662679871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-11350376-1	1.87021713573599	0	1.53569433473836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59146262-2	3.82057733939956	0	1.45295141201311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101567162-2	2.37015393728911	0	1.58079547309175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47442157-1	1.74221260812128	0	1.51458603807702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34530260-4	12.8700232030177	-2.0987019910817	0.791951316937237	-2.650039145333	0.00804824451640217	0.17340250640789	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48770167500569	1.27992882773773
Merged-chr4-116789149-3	4.05797262978402	0	1.37871163274144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102823590-5	16.097365624951	0.274438854732018	0.438121099480485	0.626399538980071	0.531052911877984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82617577709259	4.14339270345143
Merged-chr3-10307052-4	6.03814777029487	0	1.37047857852954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34960322-3	3.97385615730401	0	1.3738231909713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65693192-3	14.9168083327046	0.885910865038839	0.498064072410683	1.77870863230695	0.0752875432131535	0.765106666951545	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4094574864379	4.99584810940128
Merged-chr4-101159616-2	4.5740403806904	0	1.38600711856588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116184082-2	3.26901685454443	0	1.41494577651918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142045513-3	4.49950194274971	0	1.41079772296479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140540302-3	3.42212079528209	0	1.37857588638686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-60805067-3	7.63659187576117	-1.8691065772286	0.637013936260532	-2.93416905162362	0.00334441998930063	0.0927547582644862	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08990144398959	1.55926189265627
Merged-chr14-72601838-3	5.45744532944627	0	1.36629991551203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102967110-3	4.5644047773408	0	1.37900308029392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46735713-3	4.00333807595552	0	1.37592118787933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134480955-8	17.2825129586783	-0.0771909637733657	0.428560368928853	-0.180116896871023	0.857060797759592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.38011747577852	4.48463133066014
Merged-chr19-43992838-1	7.42513470179498	0.158811380316527	0.667833178093317	0.237800974144379	0.812035463083327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.902369115803	2.8902528295117
Merged-chr10-88327631-2	3.58168535367749	0	1.38130401911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88862788-4	6.20232912781523	0	1.37001639925548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126330744-2	3.06682808639287	1.13510140965234	1.31907694112476	0.860527065755882	0.389498570474578	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.67591700901439
Merged-chr2-129599534-4	5.70762400510706	0	1.3803876417339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6524608-2	4.77861678908685	0	1.37338795076696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91168160-1	3.88577048218595	-1.52019374287292	1.030919907986	-1.47459926915444	0.140320311519396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24517688100283	1.06702908365212
Merged-chr13-88765863-1	1.76639544646562	0	1.4890687362825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116425592-3	5.17126755889181	-1.32336773648627	0.837991253434093	-1.57921425917407	0.114286920392332	0.987378993431135	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52234002410264	1.49518144856574
Merged-chr18-75047418-3	6.61932856616119	-1.85869482477447	0.775177155033761	-2.39776780404928	0.0164953180088671	0.283845834645143	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27175173626761	1.98022358911587
Merged-chr1-82795488-3	3.76351549737769	0	1.41356708487275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10905443-4	5.11664677532363	0	1.39810783964287	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165724861-2	4.19743073045519	0	1.40314517831447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54715239-4	9.63944288705791	-0.776028919582789	0.72085206247608	-1.07654394012161	0.281684060537131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59440027121943	1.43996574690471
Merged-chr4-94985183-2	4.82109408459776	0.170564925765141	0.917153418980522	0.185972076465392	0.852466659061463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47126464988938	2.01528233917173
Merged-chr9-40761432-2	10.7700942100875	-0.216849102062311	0.727622719132744	-0.298024094575791	0.76568477394036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69285658853055	3.5875435074952
Merged-chr10-122804083-5	10.1239480488831	0.339746250490235	0.515992815934155	0.658432133158982	0.510260493121222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6644193454103	3.69964467315084
Merged-chr8-23109412-2	3.60630201790366	0	1.44983469855931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128359218-2	6.06567596220623	-0.286511488780138	0.946725942049233	-0.302634031724081	0.762168776359461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.13341594473881
Merged-chr11-87436507-2	2.91890814865563	0	1.39702623024882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161409286-1	3.78271248020958	2.18625307661341	1.28205865471975	1.70526759330782	0.0881445286463168	0.840871026385365	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.08976818821237
Merged-chr10-87854583-2	3.99698757492156	0	1.39195947938575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171942869-1	2.60922015430826	2.31421861356119	1.33719129724765	1.73065635285285	0.0835130743438838	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.31037834433945
Merged-chr10-43001309-1	1.81778112816757	0	1.55813100021708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87959085-2	2.36629399823726	0	1.5159182141723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137718166-2	3.473595838971	0	1.38938635297362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132113828-3	3.47788901694071	0	1.39619351650518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62841807-2	5.20692427233099	-1.77938096024173	1.27398715657676	-1.39670243224663	0.162503072489588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr7-144907218-3	5.68963545650086	0.479535013570861	1.10200283391465	0.435148621049736	0.663454553468748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.88866493597531
Merged-chr9-108847732-4	9.28222528718448	0	1.3681730245568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114970319-2	10.5197384316203	-1.00260577383499	0.514483994809629	-1.94875989136645	0.051324105683796	0.600371650713463	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90536029586915	3.85045900815279
Merged-chr4-88412580-3	5.85363750629275	2.15608496874092	1.22319659114504	1.7626643046173	0.0779571244966784	0.781713951395488	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02748994520012
Merged-chr7-81234343-3	3.13345873238496	0	1.47455733736415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40023589-3	8.99679615578964	0.0493102926502155	0.596691771722595	0.0826394714776461	0.934138214899027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16859788907049	4.15409346594398
Merged-chr4-3650560-1	2.75444899018492	0	1.38854336927399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-175639973-4	10.1973032746183	-0.187354167373669	0.507618191685738	-0.369084816979251	0.712064505560954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47620850822374	3.13756953767276
Merged-chr13-111467495-3	5.24326497560441	0	1.38688770612689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81594413-2	3.92780897724107	0	1.38789421432298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125090002-1	2.06299706973177	0	1.57382356075867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161894309-2	4.59274085598308	0	1.39030182744263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98294694-1	3.42924206365211	0	1.39181317726716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75499501-2	3.3969157139027	0	1.4342330904153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146746721-5	7.39105049755908	-1.69475131064235	0.95853118893327	-1.76807111777802	0.0770490151644818	0.776331309606315	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	0.903978167044898
Merged-chr10-68256289-3	9.17637265887352	1.31148733078531	0.747120156683803	1.75539010566457	0.0791926033218913	0.79016716666202	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	3.21428383782336
Merged-chr11-107011848-2	3.91615456040583	0	1.3905914951449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21035764-5	11.0612255974079	0.145405269144543	0.852160629174305	0.170631291996478	0.864513691288946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	1.3626301568499
Merged-chr8-53627119-3	4.45495311547508	0	1.38275425890446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86479284-3	4.64651190700562	0	1.37620006510824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30719332-2	6.63381725506894	-2.02058366690517	0.796093376218779	-2.53812395287394	0.0111448503586642	0.215979650854413	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55174571588551	1.67198523919243
Merged-chr9-9682532-2	3.11192622568988	0	1.39129310790456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27190377-2	4.4691011342799	0	1.38675818901915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81241080-2	3.57413654206244	0	1.4241285187502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72244782-2	11.364318452475	-0.832895134920743	0.563840803266388	-1.4771813783176	0.139627024072227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.11737834255412	4.09282719141992
Merged-chr5-142899382-2	4.8664323836901	0	1.41157729264246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12204622-4	4.40208077878405	0	1.39390468946211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77874467-4	4.41705815156053	0	1.37366156684367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42515566-3	5.29615246455678	0	1.40060641481448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25048017-3	4.20105641784304	0	1.38292475738989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99268918-3	9.5624268051879	-0.688627472999393	0.676946182329367	-1.01725586313203	0.309031727258563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23354700132146	2.73449652731951
Merged-chr10-80566518-3	4.57994517560004	0	1.36020215275581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100216348-3	6.44870271258183	0	1.36029104598137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33895202-3	5.51034638582155	0	1.38779851610984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25107779-2	3.41526093619398	0	1.42660239041995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146251970-1	1.37405313061621	0	2.43773790319832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21139684-1	1.93813462625768	0	1.45894251831463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36130745-2	8.7674993198823	1.29362833010679	0.874407703169343	1.47943382179498	0.139024406303136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22804756028978	4.01171736842913
Merged-chr16-24115610-1	2.29758795884976	0	1.56012429717116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62865579-1	1.74414985636245	0	1.47035313772995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21330982-2	2.39208972731759	0	1.48604652956341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32427836-1	1.55467299259657	0	1.5582388438672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114660116-1	1.91698910346322	0	1.53586949254659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39854045-1	5.69717873611331	-0.855594519643197	0.757562280306275	-1.12940485803661	0.258727084434578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84793875274919	1.79305269258721
Merged-chr15-26016520-2	3.43565109902148	0	1.41893258346607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-61135737-1	3.42765809296794	0	1.46265310546629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70355086-1	3.923185966796	0.803596549113688	1.24541677359809	0.6452430753699	0.518769675653193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.7259685848666
Merged-chr5-117182648-1	2.26164661141746	0	1.56158970849059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133701227-2	4.65150488736061	0	1.38094210140756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16363934-1	1.61312617661774	0	1.431493694021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57552882-1	3.2065105238818	0	1.39240298142643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3157884-1	2.42220346874155	-0.699298050599864	1.22758897175824	-0.569651623375438	0.568914007516708	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	0.724326877898254
Merged-chr5-43693136-1	2.90352127088897	1.14476743504012	1.371049829026	0.834956841687781	0.403742008694539	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.67591700901439
Merged-chr2-132509438-1	2.07848559930616	0	1.4566145263146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125777986-1	2.10151459848586	0	1.45472839833379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75502350-1	8.4494633909857	0.5535414070674	0.76566603800188	0.722954107396417	0.46970807976758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86403106287076	4.48844746984293
Merged-chr5-96804978-1	4.53111935860715	-0.287079035399953	1.08797826504722	-0.263864678755776	0.79188419358488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24620897574346	2.68995332176693
Merged-chr5-113826737-1	0.837493692721392	0	1.82341452048507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79273987-2	2.79132146913922	0	1.49475513173524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10376822-4	11.3595736836103	-0.0351996288268327	0.511554992457899	-0.0688090808335326	0.945141589762483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10829358559163	3.07462213079607
Merged-chr5-22856014-1	4.38461315778201	2.0793699095884	1.16576318534421	1.78369838379691	0.0744726889177257	0.760522430373596	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43750690265746	3.48789542167289
Merged-chrX-51461640-1	1.60330039773197	0	1.62662572137315	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45911052-1	1.59314179120503	0	1.48091740112629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58731011-1	2.44871446260529	0	1.41996008374622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120362739-2	4.49699881858037	0	1.39073080251731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55280451-1	1.64160014802453	0	1.5463509473236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30990418-1	1.70559121978899	0	1.45930547146624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141267958-1	2.70382669688108	0	1.42422168868567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84637675-1	3.14424323751491	-0.0352339121555583	1.47040560751427	-0.0239620360365202	0.980882890859543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.41385117919798
Merged-chr13-41302856-1	1.94983179172493	0	1.55238293617465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-98919606-1	4.63823227964218	-0.0350991301695667	1.1729748131017	-0.0299231746304542	0.976128323440766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr19-58918782-4	11.0469472631532	0.294839414527859	0.58889527055416	0.500665278310709	0.616606712537402	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48853090112376	3.1872214034049
Merged-chr1-152555186-3	4.30663551893639	0	1.38925204726526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102416449-3	9.57700201097332	0.173251225819343	0.786100420595081	0.220393249107017	0.825564902598465	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10134524129244	2.75989544352611
Merged-chr17-50528069-4	11.4496173353331	-0.38675617916556	0.830310417690051	-0.465797093382892	0.641360745816265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.60310561942228
Merged-chr3-139099483-5	9.7900312557883	1.17110383566428	0.742368298712968	1.57752403718559	0.114674995692862	0.988992240340834	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	2.48703731656238
Merged-chr13-58117833-3	6.69101843788888	0.693589914107157	0.880188338719287	0.788001707812172	0.430695706934253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53857528724196	2.53556056636986
Merged-chr15-34775919-3	7.32361017844141	0.44970933294323	0.674261287943901	0.666965968511373	0.504793871418525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20314576601682	3.60842643863386
Merged-chr11-43213328-2	6.78478530001321	0.321812730972412	0.676079995126176	0.475998008064641	0.6340757970101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43884655774859	3.05579688924361
Merged-chr4-19950765-2	7.10698962178025	0.576328026701762	0.625946435933292	0.920730582709448	0.357191105031032	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91601014191884	3.33684163028743
Merged-chr4-66816822-5	12.7147204165775	-0.0451276536031126	0.631164117634914	-0.0714990797832647	0.943000556911979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6644193454103	2.71081058275469
Merged-chr10-69306389-4	5.55477108675547	0	1.36343135963842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115100690-4	5.05267204447742	0	1.38454336467519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9394146-2	6.92136813573746	-1.27157238652254	0.868260222785089	-1.46450609293578	0.143055719518605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14016883463966	0.730937814817307
Merged-chr11-116406317-2	2.91958111121598	0	1.38154215699556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8928964-2	3.01270112929852	0	1.42943429584803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85671162-2	3.96587825044547	0	1.37598424610905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150013389-2	7.48786965005165	0.701203213054027	0.702676822411627	0.997902863292769	0.318326463422043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51338020061524	2.32107180410683
Merged-chr4-154837359-2	7.3420470195411	-0.168742177994481	0.646625499560458	-0.260958125080411	0.794124799938926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62868982641478	2.05280564119327
Merged-chr7-145050908-4	8.2828097274321	0.789934514503423	0.718598690468214	1.09927074037489	0.271649990936436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	3.02305153286915
Merged-chr7-98338437-2	4.18407086219731	0	1.36860227162353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88830278-2	3.48182766952218	0	1.4156203757468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-109231463-2	2.68180778234154	0	1.50214225228079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-63872-1	2.22771606018019	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96630613-2	6.15830953868742	-2.29185145066001	0.765509116941697	-2.9938917773001	0.00275443626196701	0.0795040774063575	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13777493890679	2.00101204725338
Merged-chr9-66895007-2	2.64067132114538	0	1.41236652701655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16064300-3	9.31690090812397	0.0905173281152838	0.732192396060078	0.123625058935816	0.901612150522748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.01086664255504
Merged-chr4-45285541-1	5.00936458086839	-2.35894747157155	0.767666698998127	-3.07287977275839	0.0021200388231477	0.0652859560539963	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60320420478393	1.14143228603163
Merged-chr11-46215515-4	4.18116222678533	0	1.44741255523678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117384000-1	4.1958945600029	1.80817563558406	1.33586803400725	1.35355857730948	0.175877249814165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	2.13446293034417
Merged-chr13-50949684-3	3.84812776877863	0	1.37940504362045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39274444-1	2.02757425873315	0	1.46373366062178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112448675-1	3.07442414620177	0	1.40982234254448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27724517-4	4.55144102163029	0	1.37602685525481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40777278-2	6.17197468272281	0	1.37123362138001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105957650-2	4.05455341916311	-1.91869107685937	1.3813924592873	-1.38895435830689	0.164846629389047	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr6-128872438-2	3.34774389265136	0	1.39355670444757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96279301-2	4.43666934219023	0	1.4078345833222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78903390-2	6.25419256811168	-0.329648549478707	0.842652374652276	-0.391203489594078	0.695646829117623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78612360069773	2.1881845164991
Merged-chr3-52401303-2	2.2862316573611	0	1.44676541917674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76275160-2	3.54255856053493	0	1.40881710879056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129092370-2	3.32975241869511	0	1.430708085534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36761085-4	3.31993875733108	0	1.39896279293916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17261304-2	3.54094930628473	3.33208215705663	1.35686354427501	2.45572384276638	0.0140601157867708	0.255104751019051	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.45881469756713
Merged-chr4-140173434-1	7.49826844969979	-2.48333077903255	0.950157471928738	-2.61359916897944	0.00895940784535711	0.186670927966948	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42013469493175	2.1600769923993
Merged-chr19-41773953-2	9.04830864723782	0.760812683497663	0.581999829585393	1.3072386705674	0.191131665849278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4557777556214	4.34123909173429
Merged-chr17-79347444-2	5.77404055277758	-0.506958862067711	0.743458274712059	-0.681892823459468	0.495306723638067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51588681378309	2.2947317631734
Merged-chr6-17481258-2	7.30785328923531	-0.0932230291933106	0.589448452411367	-0.158152979810102	0.874336254030896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56626979385927	2.68483804261906
Merged-chr4-98465639-2	3.32719638980462	0	1.42713277522541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19266892-1	9.71209626658664	0.516754353181935	0.765382857568746	0.675157991940681	0.499575392586142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	2.4685601120346
Merged-chr11-5945303-3	4.50861116976714	0	1.40427082753187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86659142-3	4.25064074660924	0	1.40408592977354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17633969-5	8.93499837333365	-2.673242986683	1.13836281975987	-2.34832246826798	0.0188581867497543	0.308397164118501	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67453645373796	0.376242425970964
Merged-chr5-64134115-3	4.03431681474144	0	1.38230556959416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44922686-4	4.42685842937401	0	1.37939372852672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97229592-2	6.42779212554702	1.14307234068912	0.64732818555895	1.76583125250773	0.0774241636246757	0.778619036152448	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27312352959067	3.63256270758955
Merged-chr2-129562565-2	4.29067078985891	3.09866728008302	1.1780205862676	2.63040163831155	0.0085284045074664	0.180880039259214	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.85699717634292
Merged-chr13-40977807-4	4.80901806490017	0	1.36056247066725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-15986676-2	3.50865827604515	0	1.39473317681378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152187289-2	4.11396574613758	0	1.40824971762302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85151046-3	10.0700545334415	-1.16955654945275	0.571534673123286	-2.04634400055106	0.040722537493702	0.513604736802819	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70062961496664	1.75847184294284
Merged-chr5-122732212-1	3.54885356344272	0	1.38560198057428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21354877-1	2.74068020528457	0	1.41949341211336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87350513-2	6.22510954274802	0.957370842644134	0.735400364317333	1.30183623655511	0.192972373539618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2547128493771	2.90496748123998
Merged-chr19-9930453-4	5.99731174898525	-1.0469167961142	1.35147594978864	-0.774647004467919	0.438548274141861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.41385117919798
Merged-chr4-65590006-2	3.30945041038008	0	1.39351518640329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35214816-2	4.91651367920516	-0.268136627177315	0.97921342715721	-0.27382858500598	0.784216355245376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.27673210875742
Merged-chr9-61703995-2	3.70705865559821	0	1.37972304610011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99463326-3	8.76062580664495	-0.199544500846571	0.520717810279014	-0.383210439334983	0.701563738295873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56318844920718	3.32913541346328
Merged-chr19-37814667-2	4.31584922379254	0	1.40015113320881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77790979-4	9.64713334914094	-1.14462584439463	0.602459250428667	-1.89992243223122	0.0574432997268375	0.648372161513945	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96465011113603	2.81493131411159
Merged-chrX-163746262-4	7.40936514666616	0	1.37220632753322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86444225-2	4.03253836810172	0	1.38744191669789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89034748-3	14.3767972789375	0.120705674277702	0.424698183733589	0.28421518834048	0.776245476602501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.87171184067526	5.12340567140305
Merged-chr8-124212774-1	3.03352495018511	-0.845125006139271	1.3433167034022	-0.629133103160879	0.529261920157541	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.465515277017237
Merged-chr14-21985573-1	1.65337026732959	0	1.47915189972492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102579239-2	3.46671468445475	0	1.4655461869565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54889221-1	3.66832735546978	0.566649272942822	0.910089964141965	0.622629954476051	0.533527722151736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03052458879259	3.05592019777363
Merged-chr12-35044127-1	3.8907314871139	-0.0187655914302911	0.951847274472725	-0.0197149184890888	0.984270789859688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9378031202644	2.85483502086072
Merged-chr4-9683953-2	5.09566749712931	-1.45142919363378	1.09011958953982	-1.33144033696935	0.1830441643159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	0.577068348605183
Merged-chr4-149158847-1	2.86611437125131	0	1.40457257552738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24684715-1	1.16673476623655	0	1.67474205093794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73450349-1	2.31077714717957	0	1.44072331372402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117899243-2	9.06414431687932	-0.555200322574203	0.539838034442977	-1.02845721707452	0.303734805789226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14791902149218	3.52352436305476
Merged-chr14-103532052-1	2.56608845924451	0	1.39802925952629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59889447-2	3.40978476230687	0	1.41133644862916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15813933-2	4.58693909467124	0	1.43168850448213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120105219-1	3.90633397573419	0	1.39377957789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115493574-1	1.9690933795144	0	1.48971196741866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23527230-1	4.38413036740319	3.70379062998936	1.11087349187581	3.33412459391319	0.000855683193375929	0.0318683781135647	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.68457659367707
Merged-chr7-127163669-1	2.41408438881537	0	1.54318747108268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68952221-1	2.16059942487887	0	1.44328341114891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88203049-1	2.29972755677408	0	1.43864580059446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99677465-1	2.13289957783351	0	1.49334156173389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89449670-2	3.59044314359955	0	1.42186816293194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90710683-1	1.90940810333733	0	1.56453522707323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7226446-1	2.83906128063633	0	1.43294955307574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80730164-1	6.12747449591929	0.180235420615055	0.703897829889125	0.256053382979522	0.797909617224265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0874689569034	3.07223389623765
Merged-chrX-142504830-1	1.3739517625168	0	1.6026768422718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101559660-3	6.21646353547476	0	1.37005353865372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150488924-1	3.59741122335795	-2.7451844223413	1.2097253036218	-2.26926262856741	0.023252359717814	0.357256931006403	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0
Merged-chr12-3778424-3	4.12449284254622	0	1.38980033643653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41101944-1	2.72893407102677	0.369904055573267	1.28320484487748	0.28826578784355	0.773143293448574	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.54726712393679
Merged-chr1-135594236-1	1.7777263123728	0	1.82792347138129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121931535-1	3.5015934919375	-1.12408525956136	1.00154889978732	-1.12234685675363	0.26171499067085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54911532759686	1.46460328489499
Merged-chr13-97249177-1	2.35122559632071	0	1.43631076061442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-19968127-1	3.12079915580092	0.443376599390583	1.32235691031783	0.335292685303861	0.737404310994832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr14-25470840-1	3.3090518736085	0	1.379826459368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52920886-2	3.48182359830932	0	1.4068024133269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101863644-1	0.62197811156195	-1.10413295148258	1.95759263906162	-0.56402590071643	0.572736505280601	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr9-61350663-1	1.86981726638055	0	1.58857032614578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78245668-4	6.80638612545111	0	1.38575280210585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26213877-2	3.37431862463777	0	1.38246821986671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105660174-4	9.4869205438359	0.576165583129682	0.532076860125323	1.08286156814633	0.278869872637703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62648477973364	4.32011758540549
Merged-chr2-163716625-4	4.44356388045039	0	1.39755932970207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113745564-2	3.56375600876076	0	1.38463613376183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95548638-2	7.49032223602684	0.284020479029167	0.669362514972059	0.424314885695418	0.671336184607408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42512484922428	2.71463501117953
Merged-chr11-12050695-3	4.89739980696891	0.00433787076741524	0.956333714494438	0.00453593834627951	0.996380857235239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	0.838451940269823
Merged-chr10-58378010-3	3.83496664788498	0	1.38163379525506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82567876-3	4.49782940952971	0	1.38384735520886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45481578-3	4.32734791222537	0	1.38720056255032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67190398-2	3.48800183765674	0	1.39531885240631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25035299-2	2.77147962672651	0	1.42145597842464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157130027-3	5.30577744392535	0	1.36670108338146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122381091-3	4.79941175267371	0	1.37815857527253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24675590-3	13.2423437538461	0.181714789618995	0.485215467015843	0.374503291777922	0.708029908010492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44157095909254	4.5983492575722
Merged-chr7-98771328-3	7.86468947157906	1.34761083771002	0.654435725416014	2.0591950979653	0.0394755525894971	0.502541349698471	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48853090112376	3.749251873401
Merged-chr6-127268234-5	7.94286052247231	0.20427896964753	0.879520460088878	0.232261759580769	0.816334711768284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.25298535761957
Merged-chr9-41182753-6	10.9604616338568	-1.30975428411719	0.648747783744753	-2.01889596686855	0.0434980335171381	0.536169978221794	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04524074139401	2.86637694411419
Merged-chr10-78159412-1	2.8097672506794	0	1.42270405142323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-32252477-1	2.45254893504676	0	1.43014457344068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46770077-3	6.03687626311301	0	1.37707290172584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74906956-1	2.75351165515253	-1.70241521911996	1.42424746278943	-1.19530858477763	0.231966486894988	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr1-178329226-2	2.61284490568247	0	1.43500227810041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142904060-2	3.01867683358965	0	1.44352239823558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137577037-2	4.99992643182516	0	1.38817305886809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15808655-4	8.82494540010945	-0.20244493003161	0.698309387874975	-0.289907215264097	0.771887221583979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41235965366896	2.29430509453081
Merged-chr14-45085383-2	4.27320658448517	0	1.38761256495714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34929757-2	4.95521613760195	-2.51732610250642	0.925283185026818	-2.72060072337039	0.00651634165081987	0.148209964768585	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14168198528352	0.577068348605183
Merged-chr17-62604546-3	3.34038140862287	0	1.38144166797532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99092877-3	5.54499672003777	0	1.38058412627421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21601137-3	3.94498951084911	0	1.40902647210698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34643153-1	5.93343074426364	-1.00788044514545	1.10578547538163	-0.911461099448435	0.362052473185847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	1.13341594473881
Merged-chr17-8264810-2	4.30522575965926	-1.14560196973302	0.955429902992366	-1.19904345273791	0.230511049959027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89200393807192	1.02186287315087
Merged-chr9-37248628-2	4.96057090639931	0	1.38338746338212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5253390-2	4.11122002931603	-0.19304240882217	1.22957402315472	-0.156999420276366	0.875245304988472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.577068348605183
Merged-chr4-119732955-1	4.79656753172122	2.33281999300006	0.923973570826674	2.52476917809771	0.011577430341445	0.222113301553765	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	3.82539307654899
Merged-chr17-29246764-2	7.1847493071777	-1.04149406013319	0.673647543249257	-1.54605189400627	0.122092035464564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48762807179304	2.58934039553399
Merged-chrX-7288966-2	2.61996767984403	0	1.41838533856298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104678266-2	3.74938265407158	-2.16140233299188	1.11708606273132	-1.93485748779926	0.0530077862488057	0.614082240859786	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2618610394913	1.08918047352118
Merged-chr1-181616285-2	2.8492929165678	0	1.39477069473119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100590687-2	3.94025949718439	0	1.40938439231825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50065599-1	5.83399947738034	0.348098955193616	0.813479586324323	0.427913571582647	0.668714045900048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30437869478391	2.23160211992161
Merged-chr2-155284793-2	10.4346000099951	1.24617534182959	0.705578193324029	1.76617610014104	0.0773663093789833	0.778374090603767	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02556788175686	4.64018118598584
Merged-chr16-91739223-2	4.82305211341528	0	1.41711245738116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116654347-2	4.78785273915039	0	1.36694054396245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94275159-4	12.827337243282	0.963291989673205	0.602981977369441	1.59754690160997	0.110143851672099	0.966006717173866	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94214883085777	4.85261266924645
Merged-chr14-25773882-2	3.57005855416313	0	1.42087488221928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163699621-2	3.91451547361399	0	1.38281905971846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24546449-3	4.25990298959855	0	1.36400283928739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45305470-4	4.60719990107677	0	1.36159999492372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44873890-1	3.41690055417261	0	1.42065272026949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46092825-1	2.66084058125351	0	1.45330984876342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79175547-3	8.35231560622953	4.25331847640726	1.0025291742426	4.24258823153011	2.20956627061956e-05	0.00171340674614277	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	4.37376166779127
Merged-chr6-125600352-2	3.12003116108818	0	1.40811764934915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-29275456-1	2.91380952299117	-0.416907201793702	1.30555683417503	-0.319332863097562	0.749474115004612	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.67591700901439
Merged-chr3-41348907-1	3.16686244427467	0	1.42203806885066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6098025-4	6.12410138003513	0	1.39141630609818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114967712-5	21.2244283200399	0.799721219084611	0.465216977723404	1.71902844775387	0.0856091920921712	0.825689923646582	C57BL6J_F1_Control-BALBCJ_F1_Control	4.76424111064241	5.94124637247143
Merged-chr13-49162875-1	3.12065270559964	0	1.37639416191935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104140543-2	6.3108788891266	0.167846709003918	0.838931364149023	0.200072039473903	0.841424240507824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69736543272236	2.68078947292863
Merged-chr10-62582882-1	2.8210638936399	0	1.39523591154076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3149656-3	4.00509584773513	0	1.40435856661108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-114917250-3	4.72523213420573	0	1.36889840109639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146770367-7	13.4555698921172	0.716951604351197	0.6037389248842	1.18751926503449	0.235022862188567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41179153058375	3.4575773969794
Merged-chr9-114978482-5	8.94876184330324	0.0303326747122173	0.789828166545534	0.0384041440872932	0.969365456917319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89255009218154	2.20615822549104
Merged-chr13-107904580-3	9.20011596828341	1.2529273292216	0.907096861169402	1.38124976819605	0.167202177222012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.0616452534421
Merged-chr1-65536445-4	4.54050764465849	0	1.3971375463978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110268182-1	4.68728521725285	0	1.40467056705898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24007977-1	9.4192309667006	0.83199655086313	0.548251418118438	1.51754564305276	0.129128978818187	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44252268086676	3.85648209757432
Merged-chr12-100732019-3	7.14213333938683	1.78876934908432	0.806891680835208	2.21686428497166	0.0266323669881822	0.392652247656793	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42539729206526	3.16929931589704
Merged-chr2-29592805-2	3.45592777224473	0	1.42347876565429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21231895-2	8.29974526562195	0.24835457626183	0.67241420132411	0.369347607133778	0.711868644769067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40082069256353	3.23487412892014
Merged-chr9-123951350-2	3.51193083972555	0	1.39589635511947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64806421-2	3.14391845560874	0	1.38733708304982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106528570-2	8.7171996262374	-1.49738214523157	0.66304347576923	-2.2583468504752	0.0239240435415704	0.363509646957121	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58531442897122	2.34695791138986
Merged-chr1-128549660-6	16.3490452308577	-1.27232773023577	0.437763683497611	-2.90642595125804	0.00365583415768973	0.0987694657368698	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39088949272004	4.09964362406522
Merged-chr19-6271462-2	3.92805911024488	0	1.37581150122367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64505436-2	4.61763271210551	0	1.36316634949071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66768930-3	4.01555488804689	0	1.38698902007356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126623779-3	13.7013113508723	0.315691043017739	0.418797812331894	0.753802989705103	0.450967528503161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17875148268984	4.46987248092407
Merged-chr9-62876296-2	4.48202047803713	0	1.36355693076079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118592828-3	3.47355488637832	0	1.38500661481922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41073621-3	5.67546779118116	0	1.39753841709482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102633135-3	3.84296766690302	0	1.39207038742323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47915300-5	18.376463751237	0.164464477095724	0.415870646423868	0.395470270647802	0.69249585784165	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27272140846023	4.43865014031088
Merged-chr15-7264021-1	1.93557970163192	0	1.45747105980401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41481730-1	2.37012214463386	0	1.42914598124986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-46148750-2	4.48658312145957	0	1.39133084502306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128181526-1	4.0925173783499	0.640238408181204	1.27393636773704	0.50256702327958	0.615268719145941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75238521850622	2.47633894090533
Merged-chr3-136440430-1	2.68745256467623	-0.435340054219558	1.28156747864325	-0.339693431266248	0.734087408998702	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.02186287315087
Merged-chr10-68795637-1	1.89830877148968	0	1.5025728227035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105900459-1	3.39447736129511	0	1.41327288091888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32856464-2	2.12060782889687	0	1.44075036057998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118556514-3	6.17864924835055	0	1.39849489872889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12268250-1	2.30382561425697	0	1.42017633965419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29379166-1	6.09460195867275	-0.162955944859293	0.706738743116564	-0.230574517735781	0.817645366108634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01773661629365	3.50343259952913
Merged-chr4-155540695-1	1.5221284090183	-0.728914420862823	1.81016752567161	-0.402677879547298	0.687185208956303	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.716426531808663
Merged-chr18-80437243-1	4.52162602786475	-1.51448531106673	0.976215681328454	-1.55138392061658	0.120809706255564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17521452392493	1.63234578815522
Merged-chr8-47940727-1	2.18999581966823	0	1.40993212310979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77828284-1	2.47255052371292	0	1.42352556029042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33389012-1	8.61454282544627	0.0633886011128435	0.524492784355211	0.120856955526606	0.903804336692228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62955887783128	3.68201077046727
Merged-chr17-88458545-1	2.82659870881807	3.16172208887044	1.33640806298747	2.36583583744817	0.0179894191775125	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.00105898665567
Merged-chr8-77425028-1	2.77628023582848	0	1.44104980385279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69031152-1	2.3210248461421	0	1.51871895773553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113811350-1	2.1587541560629	0	1.41656404015503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135659231-2	2.83821570005903	0	1.46655958749201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37876512-1	1.02643450192485	0	1.86021887752609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92241372-3	3.60253335398906	0	1.39335356022463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181545576-1	2.16936246055133	0	1.40393827050118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58050204-1	2.29646292217926	0	1.43290491123823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53421703-2	2.24015936120921	0	1.62602709105015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53688873-1	2.78978838783594	0	1.39711593515414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-43364646-1	1.83282385810751	0	1.52563595447136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49678670-1	0.953952205872188	0	1.85986869741259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122658528-3	5.92444360004569	0	1.36761783140183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48175787-1	1.95718945086295	0	1.49783475878196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95932412-3	4.97135803546729	0	1.38860494273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99283821-3	5.81941286516944	-1.82360886127921	1.32755342852122	-1.37366136993112	0.169546834907573	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr6-139905696-1	2.59383521343095	0.462425220412709	2.14998185015999	0.215083313553693	0.829702363318437	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44675642717671	2.08815580974227
Merged-chr7-67707139-2	4.51175019643779	2.38028795045502	1.28321832305596	1.8549360679221	0.0636053566775192	0.691228225436478	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14143228603163
Merged-chrX-106047078-3	6.20485941440828	0	1.37778849562085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69421461-1	1.61765670107403	0	1.47287127364149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-89354904-1	2.64011589842882	0	1.49495236550271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113382278-1	1.78176210218052	0	1.55693194123939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97647416-1	1.49308704015687	0	1.61445289400677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23980375-1	10.6138541800011	0.397577949480729	0.467628481331741	0.850200459023545	0.395213646582844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01586871627451	4.28499204586278
Merged-chr4-89363503-1	2.05992552165415	0	1.49179948193147	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14131003-1	1.66834899639394	0	1.56352898956758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70199320-1	1.82781436677106	0	1.69625988997365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114994568-2	7.64686238779619	-0.591454652338733	0.833912099031076	-0.709252993242268	0.478167493258632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41227753265017	2.81891129236253
Merged-chr7-4556948-3	8.76941895316555	-0.808752529514727	0.6558091527414	-1.23321323914739	0.217496217256759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47926873502901	2.36348447703356
Merged-chr11-110979814-2	6.22787116144413	-0.367384920361754	0.869270211796492	-0.422636040411981	0.672560827203189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	1.34503387201423
Merged-chr3-65297204-3	8.26097680598486	1.07522852769612	1.16446075631358	0.923370342767104	0.355814241509801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	0.730937814817307
Merged-chr4-95867280-2	4.54027173001909	0	1.3855019040158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26130197-3	3.84004459417863	0	1.42555318945954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137455796-1	3.74817756414584	0	1.39365429124047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37419762-4	4.63911581066213	0	1.36587011744483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-65696628-4	8.99696937475312	0.346575505057217	0.538916035033139	0.643097407624744	0.520160896532607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15988799187641	4.09983169303939
Merged-chr5-64634979-2	3.56788250627353	0	1.43530391166894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79594017-1	3.82711424439258	0.911633260221661	1.0788864752821	0.844976075896484	0.398124196739593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	1.00114351279961
Merged-chr13-54828764-2	3.72034325414037	-0.0379163104082117	1.04836813363904	-0.0361669810361354	0.971149214071734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.27743081564928
Merged-chr9-106470091-2	6.43909539703518	0.555233968369524	0.726267882395393	0.76450299101516	0.444567554945726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32569297704008	3.24234979589415
Merged-chr4-133730360-3	9.55675471817501	1.20494694800706	0.888980120067712	1.35542620223643	0.17528180616191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	2.00766992357472
Merged-chr1-193580605-3	10.1987856243237	1.65866861188982	0.739205511138792	2.24385314624418	0.0248418516074165	0.372415392037384	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57074540165941	3.12625017704735
Merged-chr8-68937832-2	6.15776634184983	1.71300117362576	0.677645670936875	2.52787149257142	0.0114756346984347	0.220737447477781	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73327766789757	4.05904698670251
Merged-chr6-31213748-1	3.48487930783619	0	1.41663584302767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137907137-1	3.21992262478912	1.82709725133264	1.37238593631731	1.33132904016454	0.183080766818066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.40373237117109
Merged-chr2-172378532-3	3.24911405374553	0	1.39415043950451	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98960982-2	6.79889825436473	0.0590636397790975	0.743169318915538	0.0794753473747886	0.936654539521294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69733277475078	2.73194986207069
Merged-chr4-144896499-2	3.83143569842418	0	1.38228069578892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56257984-2	5.50031220352564	0	1.385397726364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13579197-5	8.45776001125682	0	1.41317489152446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58572879-2	4.3121600187842	0	1.39303117156491	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12044030-4	12.7356929332567	1.2005630228932	0.65611407387	1.8298083682489	0.0672785990437292	0.715284424755587	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9263773140144	4.01358901956906
Merged-chr10-117335784-5	11.0498665110917	-0.0359666951961637	0.772780091427857	-0.0465419536490756	0.962878296121852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78862493009953	1.76831516661334
Merged-chr7-12961097-2	4.58330079522587	-0.338312034900048	0.907330465408523	-0.372865287563913	0.709248708457733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59230448304335	1.73694414934445
Merged-chr11-106659400-1	3.26449052801754	0	1.42790318290293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115534887-2	4.10006023294297	0	1.38264243212105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76410833-1	3.20895093873285	2.02987575252227	1.34487195172716	1.50934499742923	0.131210641166776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.28051966905443
Merged-chr16-95842939-2	2.85391718434391	0	1.46154092437004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113609436-1	8.92172672677911	0	1.43998964066023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99384338-2	2.97117361967997	-1.51187027114106	1.19900006212559	-1.26094261284758	0.207329523793044	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.465515277017237
Merged-chr9-106260880-2	5.71392386338847	-0.0308942167641474	0.917159389669456	-0.0336846758721858	0.973128598920967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.28311275482176	1.44790810950236
Merged-chr11-73096094-2	4.82876995000615	2.96595561874296	1.16425039324383	2.5475238281683	0.0108490443678564	0.212242076193552	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.49092140105159
Merged-chr11-29570929-2	3.4754325215718	0	1.40115116944061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21654487-1	2.07857506854486	0	1.43880006494318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65931484-2	4.57985264417468	0	1.38852108784022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-7282346-1	4.59991896442582	-0.30346818846549	0.841680037065604	-0.360550535953648	0.718435471916962	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88610343912551	2.88528451347754
Merged-chr14-104547446-4	5.98787259259719	0	1.37571605351762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87275087-2	3.23208218735	0	1.38522688649845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127582987-2	10.7801912956147	1.56938696391763	0.624214663126605	2.51417830535539	0.0119310095465197	0.227324832786282	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46681435340383	3.06788479332743
Merged-chr7-88242762-2	4.02875470798602	0	1.36541041666147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25196533-3	7.33571204566821	-1.12720513097554	0.978479654724573	-1.15199649326672	0.249322514337649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0.723581231604105
Merged-chr5-9071551-3	3.55258359308529	0	1.37487683235833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13028349-4	8.55099195505401	-0.869622315869657	0.821928676674786	-1.05802649371941	0.290043363983934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25086280164729	1.1442012793241
Merged-chr3-136434992-2	5.58237694732475	1.65264062916162	1.07383801083067	1.53900366022917	0.123803402673293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.04582763185197
Merged-chr18-42589645-4	4.50480534960341	0	1.36605168652988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126752023-2	3.09135963491181	0	1.40108202184525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134775077-2	6.22610246908616	-2.00721786365551	0.850486364448777	-2.36008235705983	0.0182708783375607	0.302064074072829	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98990566985392	2.54363658659852
Merged-chr16-77443508-3	4.19772075197866	0	1.41633424249327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3810404-1	5.33142425975421	-1.10299932771641	0.773609528242291	-1.4257830177228	0.153930984372985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47744888713631	1.67689200618025
Merged-chr5-62750596-1	2.62560089694964	0	1.45370313103304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-15201176-1	2.21980905959358	-1.19025164210902	1.59300557185897	-0.747173558671263	0.454958802615336	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.303163067301871
Merged-chr8-111090309-3	3.92757817309279	0	1.37587069616412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91495416-2	3.40034490787992	0.622631148633585	1.38569149630987	0.449328837112493	0.653194458262434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr5-110979611-4	5.67896972384853	0	1.3821650258587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170330755-2	3.01090646070316	0	1.39335202602907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89779565-3	6.21375638077167	0	1.34913535208519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23524837-3	3.45916167595133	0	1.3765061310139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57556465-7	17.5160182220979	-0.316578112628606	0.450630665717653	-0.702522346375249	0.482353470784401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97037473328226	3.65926780271031
Merged-chr10-27366252-4	8.74833428625625	-1.35508089019234	0.613810291421502	-2.20765423638329	0.0272683852630827	0.398035358418752	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29674310506215	2.83119567346002
Merged-chr16-87717448-2	3.56825304268232	0	1.3998882737701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127316496-2	6.70773107964651	0.633118680534419	0.841401649197388	0.752457142362806	0.451776193919322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51124524563069	2.54548746396575
Merged-chr6-88065302-3	6.04608411892269	0	1.38120973313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80729854-4	9.92250092082167	0.493672285024193	0.591411787382426	0.834735281840042	0.403866771879392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6366167772367	3.08177848673379
Merged-chr10-14179451-3	5.63436356139861	0	1.38681748939629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11717922-3	4.21267903513028	0	1.39832677714914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55489431-5	8.60690589923044	-0.124704235565488	0.615772882843682	-0.202516608054573	0.839512876048175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91852281030793	3.05563142072694
Merged-chr10-127558507-4	15.9909391976622	0.720865158308892	0.484798943403866	1.48693632301993	0.137031629701516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84361762147548	4.96203517248734
Merged-chr5-88698822-4	4.01784074337816	0	1.39132129129947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93727128-1	2.88043300493619	0.0208899223493486	1.17481098332405	0.0177815177470012	0.985813149131328	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.815004392037195
Merged-chr3-103605851-1	2.1582213108705	0	1.42125409218632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34706349-1	2.76902949918569	-2.72002666745539	1.20186118348399	-2.26317873048407	0.023624673814211	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98088044523647	0.303163067301871
Merged-chr2-153152471-1	1.57042146281449	0	1.73236225515307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86692099-2	2.82528808436203	0	1.42778976640594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115687051-1	2.20924078405217	0	1.4356416024307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165448661-2	2.75695261378028	0	1.3996827672039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22892064-1	1.20222214485186	0	1.73888225174765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106785467-1	2.62520601697482	0	1.41469673552341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33900878-3	8.4026975370873	-0.959690724610849	0.690767979749912	-1.38930980118433	0.164738564784473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11255450472466	1.95445428737576
Merged-chr11-34229122-2	7.09956803821811	0.538138164051912	0.703961670433667	0.764442421588662	0.444603636783879	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93326513208709	3.09200984718463
Merged-chr4-45518044-1	4.97562954415018	-0.929567714379258	1.0422309262118	-0.891901872225148	0.372445531066492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16680051662379	0.94927122251658
Merged-chr6-119499483-1	2.51565912546624	0	1.45158789538245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86265795-2	3.43409189465003	-1.93135738897604	1.23164880442016	-1.56810722508296	0.116856110664991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	0.303163067301871
Merged-chr10-39442241-2	3.00235357464131	0	1.49244761576479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-9647881-1	1.45687952768933	0	1.61349042881946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81787944-1	2.98313947347909	2.12072135636084	1.16662517086204	1.8178258187193	0.0690907591358481	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.31110203264429
Merged-chr3-127856892-1	2.63936975559701	2.19605791067859	1.4263654220247	1.53961802268126	0.123653489721778	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.66624882212637
Merged-chr7-29489009-3	3.91220751897899	0	1.38381608726035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124347300-1	4.19063609060797	-0.2217141063669	1.00548324608441	-0.220505023062599	0.82547786081142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	1.14143228603163
Merged-chr3-90295792-2	3.84909373025976	0	1.39820099858662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191199282-2	3.47562558029841	0	1.37955127096984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23038060-1	1.28984134876083	-0.0278711805969566	1.84573626676537	-0.015100305010423	0.987952157627095	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr15-41029840-2	3.08401226104678	0	1.43343714764773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-21830066-1	1.84516091888927	0	1.49729725163423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9791952-1	3.06251801308862	1.27608482236469	1.42247406429317	0.897088287510377	0.369671808065587	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.790093605168944
Merged-chr8-77436379-2	4.20317792824772	0	1.39065973826889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64697448-1	2.20999918575421	0	1.4173515607093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10819943-1	1.654394119016	0	1.51194385658652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-49976148-1	5.97110029978409	0.776523989217433	0.605847575667627	1.28171510525849	0.199942604121127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18146323059808	3.67778946877142
Merged-chr3-87364824-2	3.50524989045314	-1.29229143656302	1.36992245987264	-0.943331812140053	0.345511208951233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr10-21465562-2	3.63545278748	0	1.41294922407795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68897302-2	5.42329752432912	1.53884902608971	0.80796523992224	1.90459805701272	0.0568323393609984	0.64415119585582	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	3.01995546491878
Merged-chr10-14134124-1	2.21077747428522	-1.87312238323727	1.40303407928375	-1.33505123709718	0.181859577554031	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0.41385117919798
Merged-chr7-15930097-3	3.90028022772364	0	1.4111497037542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74702448-1	2.65696653000327	0	1.44718860685229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33005587-1	3.00229842655637	0	1.42139092206148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92865990-1	3.72824389970494	0	1.38790122649856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-53029326-1	1.95317530534651	0	1.41318842241104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5295949-1	1.76407107498818	0	1.4883257209691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49016844-1	1.84366379641141	0	1.53219392138701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34909054-1	3.21674053796655	-1.66178464347678	1.01324751810825	-1.64005794613676	0.100993119232984	0.916333335048802	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17343914874612	1.13743241080208
Merged-chr2-155033331-1	4.27094022578218	-2.39652877159847	1.14791626010977	-2.08772090341268	0.0368230181061559	0.481979879901885	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27433130487384	0.948471875794396
Merged-chr6-46142295-1	2.9982777725417	0	1.39736917269488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-14489120-1	4.82677769243627	0.0675232407777324	1.04551950076091	0.0645834350565345	0.948505674081847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57167923429536	2.80236776524667
Merged-chr5-59853124-1	2.51852411668151	0	1.45862930918033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129565174-3	5.67441645539984	0.864199620928933	0.922286934113102	0.93701817619261	0.348749208368292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.78577981580797
Merged-chr10-68141009-4	4.88034763934045	0	1.38575180613653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18188709-2	3.66597148606769	0	1.39089289872018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132794655-2	3.68947888850877	0	1.40801294403869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8018824-2	3.91351284672204	0	1.4079941262219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75532905-2	6.40308957545619	0.47746132952431	1.06874532063635	0.446749398855865	0.655056010256832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24815323407704	1.90315543434615
Merged-chr8-33618036-2	5.05651815325893	0.038669404880265	0.903108492689035	0.0428181167526458	0.965846522152994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.97656658922368
Merged-chr1-86500065-2	3.50478905457514	0	1.37627679321108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29707601-3	4.21652322731326	-0.695732628016069	1.3698363915068	-0.507894688978712	0.611527199524882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr11-74634683-7	15.0869376416731	-0.217944892322808	0.424983396112602	-0.512831546635442	0.60806916051842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6427340041085	4.44894428235849
Merged-chr4-141810065-2	7.21743722660093	2.00906605282656	0.83494611019188	2.40622242358235	0.0161184478014908	0.279127971978732	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	2.52093504802274
Merged-chr7-144923184-2	7.5806464379912	0.592675335000618	0.767705552457716	0.772008660225578	0.440109298275988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76550025052025	2.13795322910058
Merged-chr11-44546767-4	7.08261451319689	1.72481609747313	1.32890024945365	1.29792743901001	0.194312270189188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.09325667247081
Merged-chr2-114137770-2	2.4695789046481	0	1.52266798142655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172306378-2	7.01165027732145	1.54300546422859	0.877196406397709	1.75901936325194	0.0785742197454921	0.786451116027473	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	3.0449933125683
Merged-chr12-17710275-5	12.5883947553876	1.32606481302976	0.569007044870818	2.33048927070985	0.0197803064429974	0.317835553631361	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69461614433468	3.95611473211825
Merged-chr3-96663785-5	12.7938646365845	0.817955804075992	0.588972865640776	1.38878351074135	0.164898590829781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45131410606474	3.97637904730415
Merged-chr1-165187569-4	7.31450056260279	0	1.36042045311784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93262348-3	6.82042501165761	-0.5906148356811	0.9826683026991	-0.601031735794118	0.547818848903907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	0.97908007631626
Merged-chr10-81082372-3	5.31729838465435	0	1.37775261598031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106697188-1	5.16663821828286	0.712935270900697	1.1151834183524	0.639298665285037	0.522628656592937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.18909650862134
Merged-chr9-22368440-1	3.01083624952549	0	1.40643230249256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184025394-1	2.48011832389313	0	1.4703204718048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86016666-1	3.21649363742747	-2.38361516048247	1.26916461279024	-1.8780977159788	0.0603677987419642	0.669290877384139	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chr2-103801256-2	3.02213416500059	0	1.47241985085696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11279012-2	3.40255234513488	0	1.4145990179197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36746183-5	15.473494458585	-1.3771306273853	0.497351842699561	-2.76892635987919	0.00562413454283368	0.134798205297132	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40944637909998	2.54555707886033
Merged-chr5-123155632-3	3.7814571552304	0	1.37907853340296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32650992-1	2.2494572502261	0	1.4199672362261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97002498-2	3.81494901938729	0	1.39486850217564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60802266-2	2.21919548303239	0	1.47872873878538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53356966-1	3.40281507852114	0	1.41641201664445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97472828-3	6.28269088826504	-0.796476839245089	0.829635794612352	-0.96003191330148	0.337039153576268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26276386882201	1.38572824442771
Merged-chr1-44034548-2	3.0950830396494	0	1.45320838524277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-150981835-2	3.24797261525462	0	1.51781248867008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26444230-4	10.7441419643412	0.341569610170745	0.630615128624824	0.54164512499978	0.588062999307624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80435620208164	2.57367809505497
Merged-chr14-54939535-2	7.52291778024167	0.283583937150013	0.636596040427188	0.445469213034554	0.655980703779263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93480637458641	3.86510387413595
Merged-chr14-17433127-2	3.46966872937068	0	1.41140607311658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44439346-3	10.4771089700949	1.95464380637451	0.529412655483736	3.69209875534333	0.000222411064338922	0.0112991056508406	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41260968248185	4.79733458501871
Merged-chr8-24431492-4	4.55218987543336	0	1.38170300472111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107611819-3	9.05968692556531	-0.283160521548296	0.601833244110448	-0.470496643911433	0.638000231423301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69230427811441	3.21746202140243
Merged-chr14-64858519-3	4.56071561286878	0	1.38662384843613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34181339-4	8.35863652620822	2.22132911907267	0.733291012131678	3.02925998317538	0.00245153614737476	0.0727815693255841	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	3.5887238011517
Merged-chr6-51612641-2	6.98644202352858	0	1.36880742037788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128614333-5	27.1112740677724	-0.303557113600331	0.382546760033999	-0.793516362740472	0.427477039840864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.23976736027991	5.15472081870981
Merged-chr3-84440081-2	3.10840197536666	0	1.48987995287017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37475519-4	4.94130685962567	0	1.37486770331671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92965295-2	2.98786810571016	0	1.44233731147754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102810770-1	3.89920570684192	-3.0413292264421	1.16896012221636	-2.60173907444825	0.00927523912907507	0.190621067605819	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11131479907191	0.600815099743027
Merged-chr14-103065800-3	4.46328923040954	0	1.37031765992463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14123407-1	1.98903311046299	0	1.45726061777761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56488677-1	3.15717570587726	-1.44139900287763	1.31266966924106	-1.09806681502056	0.272175314689064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.303163067301871
Merged-chr11-120369830-3	3.70464673755887	0	1.36910925065772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36207110-3	3.44922023231712	0	1.40851584182209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47362654-1	6.62377149454192	2.49409245946501	1.01516133034984	2.45684344438683	0.0140163753742511	0.25481202927182	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.66575758505921
Merged-chr15-83038263-3	3.86086696710604	0	1.37543371467076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78553133-1	2.27169863658119	0	1.40532284954966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67264299-4	8.3178902659395	-2.06057052394612	1.0895550965482	-1.89120360271286	0.0585971706194562	0.65599292844157	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8133278414847	0.465515277017237
Merged-chr2-172397669-2	3.15292202756302	0	1.46529938651286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31272423-2	3.53523099705284	0	1.38286714657295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124085009-4	4.6853528707224	0	1.36570319859969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67386253-3	8.34726191249601	-0.300176381923031	0.608345540894004	-0.493430726034256	0.621708276348125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22182750332539	2.46284082507861
Merged-chr5-99326631-4	24.2243435641724	-0.972984579497372	0.368729559193458	-2.63874852242829	0.00832126830599543	0.177758418570414	C57BL6J_F1_Control-BALBCJ_F1_Control	5.39307399004344	3.55712167921201
Merged-chr18-69365271-6	7.60834870517559	-0.0063327600427781	1.03648902617647	-0.00610981870800808	0.995125100313502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	1.31782934624288
Merged-chr9-32590113-3	4.46331058562024	0	1.38186857572517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35162186-3	5.05134481157475	0	1.36601533362327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55925108-2	4.33886309530022	0	1.42511780256463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52983070-2	4.06127763046125	0	1.38885935901881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52258607-2	3.12693092403766	0	1.38229204572015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162624531-3	8.70958570129668	1.84158539861482	0.512409907045912	3.59396915104886	0.000325678414111226	0.0155430666485269	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	4.73844389129667
Merged-chr4-63307560-7	12.118353544201	-0.364265211752631	0.47506168492676	-0.766774554358746	0.443215567779238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02460324971192	3.75197234957755
Merged-chr7-125582893-4	13.3137310954624	0.739381252742933	0.479018546619381	1.54353366474228	0.122701345914951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69147060056476	4.37188155193386
Merged-chr17-67223966-4	11.4335203254988	3.10580434255165	0.585938114395913	5.30056718661091	1.15443471633585e-07	1.92496677132823e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82306449654395	5.01540417240886
Merged-chr4-138884420-3	10.1833908442254	1.09583547934762	0.591739755998761	1.85188753711169	0.0640419739425025	0.694307471388211	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39665735086605	3.87956394696317
Merged-chr1-43561312-3	4.82645038285467	0	1.38176155040654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42962902-1	2.35775615570034	0	1.41122248336933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113250868-1	4.57304072012804	0	1.38775657275934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134261585-1	2.54928556137068	0	1.45596153247389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79552108-1	2.25568139012311	0	1.46787686099307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18548709-1	2.90004969734531	-0.0314414446709261	1.25529002368934	-0.0250471556991416	0.980017350583324	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr8-88619378-1	5.68579405228786	-0.442618545995778	0.725960887034398	-0.609700266089962	0.542060378257899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22540532247685	2.24384360991524
Merged-chr4-28949299-1	3.50825596478291	0	1.41263550257132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128138522-3	3.86912486008912	0	1.38590259311549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45141923-1	3.02088669867894	-0.32928736190252	1.09440893211176	-0.300881464177317	0.763504885206431	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	1.30139522650344
Merged-chr3-86959317-1	5.09143409573258	0.680342598330895	1.06323093891119	0.639882243294768	0.52224915879286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65117231954624	1.38910170141189
Merged-chr12-28699847-3	5.68940825963928	1.47354944033142	0.888885629054795	1.65774919985863	0.0973680987331258	0.895723892204093	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	2.24992080272587
Merged-chr15-81178048-2	2.7986796861559	0	1.46666706217678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26641382-1	2.40137880480557	0	1.47893749969153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119266187-2	6.69755734378284	-2.1560463176036	0.858210724514257	-2.51225748643949	0.0119961525079452	0.228086342839942	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58209634937421	0.97908007631626
Merged-chr9-58554583-1	1.75786720896854	0	1.46467593041304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34235041-2	6.37701427038513	-0.0655309992124276	0.700749398243015	-0.0935155982677019	0.925493958370591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37098016293828	2.44171553178716
Merged-chr16-39464277-1	3.48263957159817	1.42799372773461	1.11439492638415	1.28140724075978	0.200050662202896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	2.48776119448533
Merged-chr10-14208370-1	3.5210845363469	-0.427531220008688	1.20811927152808	-0.353881632454987	0.723427592663208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	1.06633037676026
Merged-chr6-146405570-1	4.13689664569274	-1.92916843259519	1.22194543952934	-1.57876806131235	0.114389266942721	0.987669235399691	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68893048966582	0.55634759613363
Merged-chr7-6150881-2	3.64641508893486	0	1.36945681426658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40537216-1	6.42486014393974	-0.927591715557934	0.889744067770356	-1.04253767927043	0.297162465758052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80720849528393	1.38647389072186
Merged-chr6-54716986-1	7.33534318170253	0.345233056304973	0.908956745944802	0.379812414446768	0.704084666325473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21338313925882	3.67964028309906
Merged-chr6-129468363-1	1.81464465928706	0	1.53396013716767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82174202-1	1.64611728991235	0	1.48666065090045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16145809-1	1.21164908130734	0	1.80100870852219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22111571-1	1.90811325211624	0	1.48357183983594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73587150-1	2.62792677028514	-0.308345650701505	1.25405129993494	-0.245879614906903	0.805775424435005	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80659218898308	0.897114879832661
Merged-chr7-132805046-1	3.49034345740706	0	1.42736840280078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139838649-1	2.19647367197069	0	1.44313599633444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112307559-1	1.82331309759858	0	1.54503751751016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20840037-1	2.16590692448988	0	1.4823415438122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104777088-1	1.53124007622635	0	1.83237035076399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22300972-1	7.08491741075266	0.0389262408773168	0.575713150577902	0.067613951215536	0.946092949351758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67525971766151	3.77423318125388
Merged-chr17-8905114-1	1.04558054021819	0	1.71136035228461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79089774-1	2.04531416075233	0	1.44138755277909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140809256-1	1.3338992127551	0	1.72380930964816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110584435-1	3.02278559171917	-4.24574864541927	1.14568899038642	-3.70584746911746	0.000210685070828007	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53614350375723	0
Merged-chr10-23081343-1	3.64412835180929	0	1.42309177648717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83663341-1	5.9325863661132	-0.17049992753714	0.689284021054062	-0.247358015461333	0.804631163520871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88847356644337	3.92554938008635
Merged-chr10-120587397-1	2.34444485760664	0	1.44250752540465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33072256-1	2.56751251443889	2.18189771034782	1.24834842035958	1.74782750934177	0.0804939002819036	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.08918047352118
Merged-chr14-25628676-1	1.68308725206178	0	1.50329285405711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21234183-2	3.18895012934147	1.11610097821774	1.38400642736656	0.806427597551995	0.419996339545434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.67591700901439
Merged-chr16-91614620-1	1.7804151809047	0	1.44203663512526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104421972-1	1.51462524632378	-0.783335110587807	2.16626096726458	-0.361606991228279	0.717645739502043	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	0.55634759613363
Merged-chr3-132791333-1	1.90306094100741	0	1.50039698055367	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165689996-1	2.26978316109415	0	1.46306622970323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181950178-1	1.60371853667024	0	1.53573416211179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55817795-1	1.44924261438405	0	1.6120524871998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34571142-3	6.15229818883592	0	1.42105067391303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166349975-2	3.50368548140339	0	1.39277105016779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21288287-4	11.1509941725184	-0.292626494764843	0.558450222947647	-0.523997453560469	0.600280310992646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27842370825794	3.24638997243283
Merged-chr5-32761858-3	6.79302605057802	1.90350526097913	1.08425367079686	1.75559033116317	0.0791583843603395	0.79016716666202	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.80335255482161
Merged-chrX-103565525-3	4.87264592421784	0	1.38683853031267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122315685-2	4.24118583840583	0	1.39257383792847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124374770-3	3.79245248527547	0	1.37937122136543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156539408-3	6.3250490680403	2.21788315248244	0.939513883045967	2.36067097304823	0.0182419073844328	0.30167686142695	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.49425566442921
Merged-chr6-38900914-3	3.65372291473574	0	1.38392183132999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86447287-4	6.42174023931208	0	1.36002652372523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63614258-4	10.800377995961	-1.11217463189982	0.626359318890458	-1.77561760216155	0.0757959667472094	0.768707059184368	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27362719736795	3.13450511067652
Merged-chr16-22349975-2	3.42707700320066	0	1.38224652051049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80446418-2	4.35553974551394	0	1.39187491069614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75473430-6	13.3150671827624	-0.308142484184206	0.513092534897467	-0.600559281662095	0.548133565231856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61599737297237	4.12099765296022
Merged-chrX-106055994-3	4.9177266282826	0	1.36181966787763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98274072-4	4.29478448931479	0	1.41003375874883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55918860-3	2.94446095961833	0	1.40777050089591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14215710-2	4.47074077479202	0.607440438183188	1.5332666186269	0.396174044881492	0.691976637338963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr9-44479462-7	17.957510379949	-0.27658465157204	0.816328407071067	-0.3388154193536	0.734748784657855	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34389275758327	1.60294768781932
Merged-chr11-69067093-2	4.42978436930909	0	1.38440923038987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87588908-2	4.13297962757892	-1.42872038948812	1.30572526593969	-1.09419678607499	0.273868680745677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2481338739303	0.465515277017237
Merged-chr2-129383558-1	7.99443629309076	-0.195646936039677	0.76363295772756	-0.256205463711111	0.797792189971737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13186090420748	2.84383408136949
Merged-chr4-133156608-8	18.9982145496202	0.105326300615312	0.401256182390549	0.262491408824691	0.792942607985544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.62770296858885	4.83649884512468
Merged-chr18-23197411-3	6.09190428696895	0	1.3742386247739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161976086-3	15.1218827629069	-0.144753202370048	0.431232195774906	-0.335673458030963	0.737117123045641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6741729311536	4.49008875759836
Merged-chr5-103854340-2	2.37995199311292	0	1.50410640735168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97961214-1	2.4016494625035	0	1.42481920298284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48916027-2	3.3726203756257	0	1.41339293288982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101520215-1	2.21299002222028	0	1.47934328779554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108113833-4	7.8411487874274	0	1.34955260710254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39499291-1	2.13069689171503	0	1.42507995626646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83742939-3	9.00635713724126	2.44868830727127	0.803785262050553	3.04644588907287	0.00231564154812856	0.0696987590889924	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	3.73453902628633
Merged-chr19-37546475-1	4.53131151201981	-0.0379423006581762	0.625001723782425	-0.0607075136186099	0.95159214771786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35932241451806	3.32424684225046
Merged-chr15-6426057-1	2.07179357114543	0	1.46887387095523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59879608-1	2.78722184278469	0	1.42633317038997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155082632-5	11.7854527738885	0.653650592213825	0.473245931052225	1.38120699899201	0.167215323399555	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3175825790915	4.0130710614836
Merged-chr16-37685394-1	2.82227808189771	0	1.38302173537313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171160828-1	2.28009168211782	0	1.45363541789462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32388035-2	5.79466366490889	-0.88288788111425	0.750684751029743	-1.17611005139396	0.239550901844138	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23192622730314	1.73423104448184
Merged-chr19-29487608-1	2.7052574088103	0	1.40693929401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99585100-1	3.28248369777848	-0.858117346807681	1.14554486842867	-0.749090996308814	0.453802361415106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.723581231604105
Merged-chr12-16533036-1	5.82872305009939	-0.327430785151207	0.965609395179316	-0.339092377089395	0.734540140816879	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64913022529739	2.41894820090875
Merged-chr8-41141894-2	6.75050926964104	1.01055439549033	0.902807171435307	1.11934688543039	0.26299218101154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	2.30265208878694
Merged-chr6-134081904-2	6.68808769285707	-0.0335336008322468	0.896992700795787	-0.037384474592153	0.970178451498372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	1.45526469271556
Merged-chr10-22335610-5	10.223085946461	-0.842211521894945	0.524737893474062	-1.60501372660363	0.108490783874069	0.958879845025369	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33442556868536	3.30471248900437
Merged-chr17-47328962-3	7.77297620023332	0.389196670763324	0.738483109556231	0.527021763567754	0.598178475166314	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9378031202644	3.14687808145901
Merged-chr2-90554416-3	9.10289056896567	-0.292317105485813	0.723234657994086	-0.404180167881561	0.686080236308173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86471534654469	3.97512747882885
Merged-chr10-26564686-4	9.00708500215226	3.12826845126682	1.07437394991607	2.91171286451165	0.00359452895098857	0.0974538649609914	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	2.19218351944319
Merged-chr19-5232839-3	4.59019977136681	0	1.39030778446282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122550659-3	8.85662777355482	-1.22366591085909	0.593540157139556	-2.06163963152264	0.0392420579297111	0.501099718599771	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58212787671401	2.15306841387519
Merged-chr7-98953808-4	6.58949947442366	0	1.38376175100667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-36724368-1	4.90594270461364	2.13391215158232	1.06982146288923	1.9946432424522	0.0460818037630627	0.558787652710094	C57BL6J_F1_Control-BALBCJ_F1_Control	0.992113827166316	2.38010611739581
Merged-chr5-23453712-1	2.96868760843922	0	1.40543378747945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30353575-7	14.2876305449082	-0.431173392562007	0.460871494991373	-0.935560990965775	0.349499267069178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39987897949172	3.20637706807449
Merged-chr16-5473647-3	5.57743819905907	0	1.37453785659086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60844855-2	3.18163722254138	0	1.43496211292433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57527058-3	6.69563277476028	0.583293586903942	0.917635575456931	0.635648401723631	0.525005614401651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	1.67279875369265
Merged-chr18-4924240-1	2.04484705746409	0	1.5451667573159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124666555-3	3.82170288639137	0	1.42275814541028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94264622-3	5.34557410958187	0	1.37889123102517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9940633-1	3.45639162364716	-2.45247027886738	1.3442103203007	-1.82446916366388	0.0680811740823053	0.720770871637153	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30889993389418	0.601513806634888
Merged-chr8-11393736-1	2.23399155074504	0	1.43616443524075	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16628306-4	5.07313224762597	0	1.36004321707538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4438218-2	3.38645731224689	0	1.42359443185768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112510587-1	2.96128570178359	0	1.38706404172307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33895905-3	5.59691270109469	0	1.36395524566209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118659297-3	7.54789243006751	0.0883781044477541	0.823960583961225	0.107260111913209	0.914582628014594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93885859565466	2.21505521827621
Merged-chr8-88631271-3	5.87811614470388	1.3555893491821	1.02772518103871	1.31901930028806	0.187162660176459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.956353103033036
Merged-chr6-38065707-2	6.37738245000439	0	1.37802905852078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26443820-3	6.89411398184365	-1.09877846069846	1.15774091049459	-0.949071118363658	0.342584442441653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	0.67591700901439
Merged-chr3-81119409-1	3.85797944877065	-2.88125234019686	1.60749206196538	-1.7923897780709	0.0730705510542028	0.751853508376947	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23618138081504	0.730937814817307
Merged-chr3-65971776-2	3.67473678230758	0	1.39445574816271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151948234-1	2.7075767110907	0	1.40606111817522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-151000971-3	4.49349150991522	0	1.37319257124142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39320970-2	2.74581016454864	0	1.42572506339559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145142302-1	4.70902298843776	-0.595374016745355	0.726803654847812	-0.81916761531699	0.412690788894502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0206958896493	3.5462335275178
Merged-chr16-64801839-1	2.02265263367961	0	1.52858810490806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49818136-1	1.47724946773756	0	1.50511272362452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-125102876-2	4.80476322942045	0	1.35850332059323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54492560-1	3.22914524184483	0	1.39988518557674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136329238-1	3.5546256585993	0	1.37758421784543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35502326-2	1.63772848777419	0	1.961361308622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45589904-1	5.32062133289139	-0.0378062949836506	0.725173086072898	-0.0521341672901663	0.958421788413112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15813062208874	2.82134938459051
Merged-chr11-21282170-1	2.70454672625389	0	1.44861693368242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72438757-1	2.18846485428428	0	1.52184577711098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40812928-1	1.62986438083251	0	1.46389948022853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28735979-3	4.93530186869288	0	1.36676438430555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66397960-2	2.14090578646018	0	1.51623008359636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55704309-1	2.55308333504541	0	1.51815414453112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118004275-1	1.32082619684184	0	1.74572158463036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10959728-3	3.29319527988767	0	1.42567109731348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39522733-1	2.11760475296052	0	1.43588550546911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119807491-3	5.63191727328582	1.47174519428301	1.08736659420029	1.3534949502154	0.17589756219685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.73208132761692
Merged-chrX-155543984-1	1.66381097402702	0	1.55654734445739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65703396-1	5.2955202878477	0.33796451571817	0.713838355059405	0.473446843144265	0.635894416757773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42580743154785	3.00700461244195
Merged-chr9-110999468-1	2.82517929735234	0	1.40563852342846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142563686-1	2.07757339051426	0	1.45020126184485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147072574-1	4.37597490092423	-1.13973628882423	0.901228072971636	-1.2646480097609	0.205997534717513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56253623382279	1.36253468702337
Merged-chrX-86985906-1	1.26837150422341	0	1.66621624935978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116818919-1	2.46968527818501	0	1.41134613569759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8936172-1	1.83238657242501	0	1.56669632025067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-28416815-1	1.87452978881201	0	1.50210875826206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35378966-1	2.57909676219731	0	1.40162285264038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43046094-1	2.27925068668092	0	1.63465589663044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121859890-1	3.16124579586545	0.413598590054177	1.20211592617002	0.344058822489703	0.73080204939052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18907334447161	2.67565856827231
Merged-chr7-74684822-1	4.61683421915216	0.761699294443382	0.751914787982613	1.01301278631189	0.311054053579527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1098084132927	3.09025893037845
Merged-chr18-62254022-3	10.3718130525366	0.382415667871549	0.569712927377114	0.671242742607478	0.502065903672332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82253684862402	3.81861885765723
Merged-chr2-179875414-4	11.3087665639372	0.213240041342044	0.440490073948469	0.484097267914805	0.628316840150272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.39500786392504	4.58011371935229
Merged-chr9-53603573-3	4.43107515943822	0	1.37626955339384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11529362-2	6.94208805759594	0.378498350751487	0.72122266192614	0.524800967485751	0.599721558907536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04983561184268	2.69959866617964
Merged-chr9-47652720-2	7.22508439643006	0.992867739953047	0.747168188316866	1.32884102331721	0.183900424650105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07949698712919	2.97780375355363
Merged-chr3-85971101-5	11.6289828732985	1.92258524594976	0.782821879444698	2.45596769384316	0.0140505788042399	0.255102008423406	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13132003301738	2.81891129236253
Merged-chr12-77052937-3	3.75942229605943	0	1.37696429569649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102436178-3	9.23034699920127	-0.410921834747345	0.599514243683642	-0.685424640159484	0.493075999799244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70686828879192	2.92164132278659
Merged-chr17-27869307-3	9.03683542497502	-0.0388113533522805	0.905950644156024	-0.0428404721632897	0.965828701468162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90601478140672	1.87824591539231
Merged-chr16-23337481-3	4.95697152355998	0	1.38815769230722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33821204-2	5.47825196259968	0	1.3600117525022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50331947-2	6.4013888199701	2.15022086569296	1.07949147200504	1.99188314262377	0.0463838809714159	0.561055048002936	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.92755195211066
Merged-chr2-130529612-2	6.40305770395753	0.712456169875396	0.71308422385643	0.999119242916865	0.317736930426639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0509200531463	3.05845912991429
Merged-chr7-105779134-2	3.41247137924107	0	1.41703947740377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-29698208-3	8.09086584637096	1.35060318347847	0.569776010923986	2.37041075367186	0.0177683330461683	0.296940553866965	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56850392438658	4.32015963606943
Merged-chr19-34080595-3	3.5724257103129	0	1.41704869498555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51156868-3	7.94930564592415	0.670189073702873	0.6370840671224	1.05196332523273	0.292816376297045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23349578644154	3.35150576105392
Merged-chr1-157447027-1	4.14338737284534	2.45014054714383	0.995707982905449	2.46070192185703	0.0138665518389108	0.253198485526151	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	3.35230668070216
Merged-chr2-128363424-3	4.57676941554901	-0.978868493525908	1.0476686161026	-0.934330262910202	0.350133558275595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.67591700901439
Merged-chr10-61399568-4	5.04486304399068	0	1.36386384605558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77928191-4	10.4315087875831	-0.28108219739401	0.53817490637919	-0.522287817700596	0.601469949934273	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77341703873268	3.56212857032661
Merged-chr1-95468302-3	5.05952449933086	0	1.40177764582282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35693818-3	4.67267800990395	0	1.39190097494273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79467116-3	4.17168611192242	0	1.36779940851388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91112233-3	9.29370498968683	-0.532128165496861	0.67353225178077	-0.790055953653227	0.429495091693064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33629907314455	3.71765728623636
Merged-chr7-45023898-1	1.39784897983128	1.24411293928991	1.70005823598997	0.731806071669922	0.464286942622906	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr12-35303339-4	4.84399837114399	0	1.36549539595745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8606032-3	6.1005065254732	-0.139627782053347	0.685911550904909	-0.203565287490988	0.838693221669333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31711242604998	2.22377753961315
Merged-chr19-55286249-3	4.12268987787022	0	1.37289790289295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83568279-3	5.37108935261573	-0.835018677333762	0.998404472488211	-0.836353101717121	0.402956287873044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6995072319729	0.990331813111976
Merged-chr2-131767659-2	3.74706611453191	0	1.42671105244485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81351166-2	4.69985193900516	0	1.3957078505151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36832113-3	14.0681837555014	1.3265597557426	0.464274083333089	2.85727720621199	0.00427292486742245	0.109977236206542	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41497550021239	5.42993261126669
Merged-chr11-98767513-3	3.69734518055187	0	1.39354531159005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28589558-4	9.45965834070599	-0.55570426376084	0.683202426358874	-0.813381572314467	0.41599932131744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91409217719217	2.2395634581841
Merged-chr4-133821003-6	17.8334846834862	0.16791957300334	0.399948917271537	0.419852550542933	0.674593172597054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.60152461118505	4.53130167196222
Merged-chr8-124704654-2	6.49737491414067	1.93347740621102	0.76257473876733	2.53545955290416	0.011229989614128	0.217160461932435	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	3.74083069976015
Merged-chr11-115291148-2	2.86958199506897	0	1.41831998809948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93207834-2	1.97800607606154	0	1.50148536293611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82007887-2	4.00634048299974	0	1.36461995543888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60863038-2	3.48131775240516	-1.88545842873969	1.23681414803716	-1.52444765588422	0.127396923178241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48219169541115	0.41385117919798
Merged-chrX-10903071-1	2.02256405764117	0	1.48698801598217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34124091-2	6.19049859369726	-1.01060112138098	0.913656879647217	-1.10610574264071	0.268680753423055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31260716574699	0.838451940269823
Merged-chr9-55544257-1	3.61399963556069	0	1.39539936177971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43278121-3	4.93170872153351	0	1.41075246589101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64381774-5	8.86728092931852	-0.0504743167117645	0.616088566050419	-0.0819270466831449	0.934704726588034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19663145017504	2.70834219303791
Merged-chrX-163261463-3	5.45833679320788	0	1.3889257218512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164075458-3	4.41269170024038	0	1.37495478502529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127652586-3	5.25906702142743	0.0853265093497305	1.20008720063335	0.0711002578018491	0.943317962995563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.723581231604105
Merged-chr6-134333234-3	9.57382308689976	-1.36253538927421	0.679281981055213	-2.00584650745131	0.0448726269416994	0.548544911006033	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48762807179304	1.55081194879892
Merged-chr14-14602122-2	4.54489066550419	0	1.38903307180478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43285624-2	3.25108385145293	-4.12027557600068	1.18407467551368	-3.47974301047626	0.000501894964971971	0.0214500450626394	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41684433297733	0
Merged-chr1-181921700-2	4.00793504292076	0	1.37524886792413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36657873-3	4.54769548078773	0	1.39840663255549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114752512-3	4.08768693049129	0	1.38184453058566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105265244-3	4.61539130599083	0	1.38088080627477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74697824-1	2.99041326185585	0.607582409859832	1.53198929281159	0.396597034137728	0.691664639995616	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr6-51510230-4	11.6102955707278	-0.827876043618914	0.538858089383172	-1.53635263148147	0.12445191762357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66921217619248	2.51671763062528
Merged-chr19-33380545-1	2.6947964958974	0	1.40643301721958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129476928-2	2.67068702688737	2.41657313207495	1.24196196449196	1.94577064448466	0.0516822963495846	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.13341594473881
Merged-chr5-113956701-2	6.97092037132666	-2.00442358538117	0.809336443322993	-2.47662588521451	0.0132630843798521	0.245143829923284	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52648357102452	1.25298535761957
Merged-chr11-51681771-2	5.18454180167942	0	1.38273320202101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169008888-3	5.50859243449307	0	1.37439612691599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122925289-3	4.2038120416844	0	1.38283973832088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121122523-3	8.29348477164607	1.25643809528384	0.807239009114128	1.55646355180811	0.119597903249522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.74787864749127
Merged-chr9-62998792-2	3.46242037880831	0	1.40833969187498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104369219-2	3.23619143769604	0	1.38995773781132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101763164-2	4.74814397771654	0	1.36273730471841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166083661-3	4.80341168329357	0	1.36897492463161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116620826-2	5.54422709786149	1.48072999460185	1.01119548458575	1.46433604300404	0.143102153717211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.12382511851675
Merged-chr1-86416489-3	4.22548157219494	0	1.37523714585338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121340523-2	3.57955329365817	0	1.40811370853698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54748434-3	10.9407804766547	0.5005341971741	0.434720085865517	1.15139422687946	0.249570087811567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16663346935147	4.69399360949485
Merged-chr2-160304189-4	7.46893619076925	-0.0415177539296297	0.777197439928708	-0.0534198284716919	0.957397406932305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21093072451714	2.18695165983864
Merged-chr12-51705759-2	2.63730176495742	0	1.43694171357828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114984847-1	1.85100343683429	0	1.50337720048413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9094175-1	2.84099679375309	0	1.42320057402483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80651566-1	1.89217417281125	0	1.44322519233197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65889698-1	1.57719970633022	0	1.68008043764904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38427230-2	3.53537365464203	0	1.40943122055189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46168155-1	1.21297593801778	0	1.69178056398592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76473868-1	1.9566166043919	0	1.44024000642716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87277654-2	2.98504052781701	0	1.49434418181186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80737162-1	1.70522017802425	0	1.55399653956495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95892249-1	2.28748489938241	0	1.66537370413234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134171439-1	2.4759878308648	0	1.43542443882645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8736334-1	2.53896052727286	0	1.42621373854762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108704974-1	2.26723925698806	0	1.46746551333635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90343103-1	2.94634057165869	0.615150949265534	1.46124725628654	0.420976632543909	0.673772145288033	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr4-132539639-2	3.0297193233721	0	1.38220466392902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35183374-1	4.89207743270375	1.5762401324748	0.972210119742339	1.62129574715037	0.104954226685981	0.939747456501938	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73228483412235	4.08665467589174
Merged-chrX-99531376-1	2.01298951794257	0	1.51415449495035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107340918-1	2.35202050462915	0	1.40075928285761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56927022-2	2.85186854906953	0	1.40968199274814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56620874-1	2.63685005540929	1.3566445738049	1.32524142308791	1.0236961735197	0.305978803311175	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.887876939341704
Merged-chr2-6694196-1	1.46877393258868	0	1.59979447205913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34654114-1	2.37299282996222	0.995192147233689	1.36914763308939	0.726869859160554	0.467305682777142	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.948404007588321
Merged-chr4-40820995-1	1.63169735371158	0	1.50147611928083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44839244-1	1.21206715352211	0	1.71443996249554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116808343-1	3.1390144297003	0	1.3946771468925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51848609-2	2.20263485710906	0	1.43442085788393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77369973-1	2.60966053627774	0	1.4927938425436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70703509-1	4.08924300556944	-1.42713632654278	1.08444648408861	-1.31600438332572	0.188172571458752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	0.904676873936758
Merged-chr11-119905106-1	2.0846871708098	0	1.41585785859933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89395568-1	2.19069046857803	0	1.43353725157162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14237526-4	4.60501712610687	0	1.38595406650282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14352265-3	4.22445964525855	0	1.3885909290611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62844331-1	3.94073723888373	0.541370197624838	1.19206034873987	0.454146636281564	0.649723288633349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59225717122037	2.46493914150125
Merged-chr3-116450922-3	5.06658698424433	0	1.38504888602586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6325841-1	1.93456135279112	0	1.57820058279354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17703899-1	2.77451902643099	0	1.43242072626537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-77100621-1	2.24124278507714	0	1.40459447872637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-119720307-2	5.29932876008496	0	1.37777985975307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32909905-1	1.71230578350405	0	1.46672309106493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145112040-2	12.0402014386734	0.691786505554514	0.573405087638091	1.20645337906583	0.227642724802955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79404781306318	3.84514286897405
Merged-chr4-102955759-2	3.56330803624189	0	1.41980989414043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146946126-3	6.08146008775684	-2.81840453770169	1.16408616843037	-2.42113050918041	0.0154723213073351	0.272982769862198	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0
Merged-chr13-81107631-3	4.45705400166602	0	1.39685137150814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117495039-2	3.19765545026866	0	1.41452470978259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-86847442-2	7.929641670531	-1.33235259716598	0.702766594777208	-1.89586785579693	0.0579775203719798	0.652640304390236	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76886419358486	2.29394900075919
Merged-chr1-131967502-2	4.3646670832027	0	1.4090184754304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80220472-3	4.1319570331827	0	1.37180713310701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30764514-2	3.48187172699251	0	1.43517361976176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87690380-2	2.52628516382203	0	1.46783991717635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65547924-2	5.06028747400611	0	1.37976933046331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55506063-3	4.53829592117655	0	1.39288877327864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80011387-3	6.90965785100451	-0.777794889221469	0.860246572098606	-0.90415343047983	0.365914049922987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53609721040214	1.30064958020929
Merged-chrX-150956786-3	3.8758782722437	0	1.43488198920827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62252483-5	9.59437644557772	-0.910128457868349	0.651537005719684	-1.39689449697953	0.162445299685977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70122227302391	2.36932228742834
Merged-chr12-12323756-7	16.2449217987976	-0.21786226036194	0.482557927550014	-0.451473798115895	0.65164810535863	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44214509310783	4.25257796288919
Merged-chr6-98499944-2	5.17573172053855	1.19983935010361	0.860099947317386	1.3949999111683	0.163015866350522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.29394900075919
Merged-chr5-24047938-2	6.43504652730092	0.945017506737199	0.943451043931385	1.00166035409669	0.316507660754161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	1.51301315377886
Merged-chr19-21714649-2	2.4422273155045	0	1.42358320654928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21123693-4	4.82882690166443	-1.84166501616409	1.28555404129263	-1.43258467322952	0.15197656439231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr15-78826747-4	4.45135584996951	2.17387580984004	1.21546420903023	1.78851486838471	0.0736929790181959	0.756586153842261	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02748994520012
Merged-chr14-31196152-2	4.62396961088356	0	1.3754249210149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17683511-3	9.84597114652301	-0.000328095827442309	0.582201350643803	-0.000563543569728063	0.999550357310174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60322580960118	3.79865366534245
Merged-chr2-129047052-1	2.79014461362861	2.33691377501001	1.42411123036228	1.64096295653501	0.100805104962268	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.41437199749648
Merged-chr2-26644069-3	4.67669637828401	0	1.37855202643308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55970059-1	6.40943465355875	0.335018026660573	0.714435232470419	0.468927078948958	0.639121759868256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13874660884003	2.81133211874361
Merged-chr9-40811494-3	10.7592203456274	-0.901611960823857	0.580874208973641	-1.55216387110203	0.120623018398504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.73718980273697	3.74005073055908
Merged-chr7-45081288-2	3.92209089650515	0	1.40036384786447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12006848-2	3.87312336793613	0	1.43038537704989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127146081-3	5.0004835500408	0	1.39839366959032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133592828-3	13.8909780971181	0.429665759457087	0.381551230039435	1.12610240940038	0.260122174318328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75088124529944	5.22295684383209
Merged-chr8-120599728-2	4.17805156397304	0	1.38839828971862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80450665-2	3.47231071145193	0	1.42380689328001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88176112-2	8.7971297671657	1.64517693376784	0.584028621941733	2.81694573169734	0.00484827169233162	0.120506264711228	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28901212020039	4.97994589440953
Merged-chr4-126741639-3	4.40401784078284	0	1.37056970213173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45101067-2	4.24872662398108	0.342165036308156	1.11807348818694	0.306030900404416	0.759581118624655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70275322934241	2.02698741988363
Merged-chr11-69134078-2	7.94197024060683	-1.77939242242801	0.79671048702467	-2.23342412508361	0.0255209887274867	0.380185098996287	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56493919553409	1.14143228603163
Merged-chr6-143175471-1	2.38768392423303	0	1.4164069315985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132387753-2	3.01589105729406	0	1.39130921054868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-85027452-2	3.58119936259094	0	1.41943696213975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8563989-3	8.43329064215289	-0.630996177769961	0.825057392232116	-0.76479064815462	0.444396217402211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52170971140921	1.40225980929281
Merged-chr19-32495241-4	4.77735735904559	0	1.37955728672959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-57362768-1	1.80562226974321	0	1.43212492032633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111368389-1	1.35047721017927	0	1.55414267352765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63859063-2	4.58792037774908	0	1.3766542188053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36153461-2	2.85829032050454	0	1.44495347470065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30291281-1	2.59974971450223	0.336230665097127	1.28636036252796	0.261381394274591	0.79379840367125	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.28067447403188
Merged-chr12-30634788-1	3.62646930186277	-0.902436450665505	0.947622475759008	-0.952316427428222	0.34093652906207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	1.56608458088645
Merged-chr3-38115063-1	6.11010371269748	0	1.35711807298537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73007719-2	4.35382245922463	0	1.36933679913152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33923155-4	4.6532108149396	0	1.37575961317198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62243404-4	4.59386290671654	0	1.37254538907762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141783004-5	9.87087726563155	-0.428673858427231	0.80644269659753	-0.53156146150973	0.5950297624718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38519792123149	2.25382184756338
Merged-chr8-43367866-5	11.9136102636556	-0.142111461869911	0.523451956628175	-0.271489026013629	0.786014938853798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8390220256214	3.72480648831785
Merged-chr2-27770392-2	6.48649992409191	0	1.41788964747681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57721207-4	5.39211223556585	0	1.35853939606348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99450908-3	3.76638743477984	0	1.37391365468772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70645830-1	4.59770330936648	0.432207928702441	0.915336050714762	0.472184973338416	0.636794764462356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82866868473699	2.33014490457711
Merged-chr11-52043414-4	4.9420443229074	0	1.38546698580934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101524391-3	3.71226648016521	1.26940585791777	1.38103216107026	0.919171829375802	0.358005703370464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr11-118228903-1	1.65689915684652	0	1.48911832938913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120529417-1	2.97042376394685	0	1.40543763898294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55806537-3	10.2694652087896	0.606706606648652	0.596402638421497	1.01727686559943	0.309021738771405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21282271434453	3.72133294400471
Merged-chr13-105327098-2	4.05436014658222	0	1.46093022603066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47179671-2	5.42790144480289	-0.311114488289395	0.867744454652874	-0.358532384299535	0.719944937302192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19238104328308	1.6706727938367
Merged-chr6-146430164-1	5.05815886101772	-1.34046982974212	0.929000403486537	-1.44291630521508	0.149044049398392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60755374384053	1.11816745933907
Merged-chr17-34295878-2	22.7002051220351	-0.4363830875426	0.486210683302775	-0.897518509009916	0.369442301383975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.56273658385892	4.91600570771776
Merged-chr10-77626926-2	4.01008749480222	0	1.38793889551135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40134934-4	5.01437673701844	0	1.37267736217518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5541368-2	3.09018894400825	0	1.40745254718458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21909627-2	3.48788923174131	0	1.45540705324348	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4279271-5	8.91211514212216	0	1.38064269674413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53777490-3	6.87089764371927	-0.341880863277958	0.703051286400618	-0.486281541462318	0.626767564627685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92663920588679	2.71081058275469
Merged-chr11-86840689-3	3.93976072845283	0	1.38739747024625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25813751-2	3.42875674123166	0	1.37660916761206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38452348-2	3.7932190241828	0	1.3916178147128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-49422260-4	5.6443551716765	0	1.40657833129888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129842547-3	6.5030786879082	0.80804728266191	1.03633955362105	0.779712865188376	0.435559904535357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.5682414637086
Merged-chr16-16912087-4	4.92903333118563	0	1.36978081511251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108880661-3	5.07513477780486	0	1.38523216078137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33668418-3	9.23064630661053	2.89474478098021	0.754614318691336	3.8360586451637	0.000125024565432335	0.00710157821560743	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	4.19303879735101
Merged-chr19-53259533-1	1.93592247940469	0	1.51752244649329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42909039-1	3.93494844239053	1.47026252832233	0.992920632245882	1.48074526862913	0.138674466040391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.02497645810754
Merged-chr16-64935670-1	2.28579354500302	1.17180120527493	1.3913403371479	0.84221033056297	0.399670232325381	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	2.07342295582828
Merged-chr9-84499814-1	1.92073949094843	0	1.4882619838621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85112355-1	3.53382704267695	0	1.38848336346823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60261705-1	1.8049400222744	0	1.54472166823357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73693612-1	4.42184949443849	-3.18438647130371	1.05517294167222	-3.01788109374482	0.00254548760918256	0.0747946815932729	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26946532212348	0.465515277017237
Merged-chr3-101617662-2	4.68497309441834	-1.21957049316117	0.942432105457966	-1.29406721831546	0.19564220361867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0292145465841	1.02748994520012
Merged-chr13-5844461-2	2.41705353569146	0	1.51546579010538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77044049-1	1.67769271128488	0	1.6482850711934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-6191669-1	2.41627809599713	0	1.59604875528331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106926447-1	2.82816025874133	1.68458851780208	1.37493948936043	1.22520920435974	0.220496407378081	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.45065575750978
Merged-chr19-41360764-2	7.14398386701823	0.0119791694488944	0.777310781007203	0.0154110424576543	0.987704253866175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95040317292908	2.07873806785954
Merged-chr1-138517147-2	3.32558945273629	0	1.39040822314088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-112991326-1	3.19069816515746	0	1.41223795766034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169883614-1	2.00242884680437	0	1.45205554724188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93822188-1	1.6756665564811	1.26936776242657	1.5405268359075	0.823982895227402	0.409949276985356	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr10-8879964-1	4.6241381417373	-1.89449171532273	0.931912495785559	-2.0329072996556	0.0420618894186659	0.525136023635568	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12896980320063	1.44422453547533
Merged-chr15-6436003-1	1.71441765086941	0	1.58269677652818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-100511348-1	2.24347392596044	0	1.40585644208895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11798404-1	1.95876985220898	0	1.51410489778509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163764264-1	2.59250356924974	-1.371274851165	1.03779736612322	-1.32133198245387	0.186390694420435	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24152926278481	1.25298535761957
Merged-chr1-43910890-1	2.97366001447539	0	1.43376202707053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120574757-1	1.3681696115774	0	1.49488451304497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122853026-1	3.12402793251878	0	1.41488045990743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14067673-1	1.77135219551104	0	1.4595660714054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87474408-1	5.96483769386598	-0.400971647788803	0.7087741937194	-0.565725517861539	0.571580385595326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22258626807024	2.58934039553399
Merged-chr6-100341965-1	1.65002992370735	0	1.45759700642018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12090537-1	3.10865846698135	-2.10830277618523	1.49209577588638	-1.41298086239323	0.157661351193902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56763655772049	0.465515277017237
Merged-chr4-13281573-2	5.766284578196	0	1.37304268002104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13055352-1	3.07848499854381	0	1.42657241174798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-42962902-2	2.86275683593327	0	1.45401559651986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78429874-1	1.96759454266669	0	1.45098386884357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-31628989-1	3.72656806505207	0.235298491351532	1.08738463499008	0.216389384013761	0.828684240585222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50243936158991	1.28051966905443
Merged-chr12-34712694-4	10.6030000023957	0.455296311102753	0.550780672430846	0.826638140901574	0.408442192453119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2764785336446	3.69589882276848
Merged-chr1-173452564-1	2.18507297498748	0	1.45648806684991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111130952-1	1.75762720661969	0	1.57904014035156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64240932-1	1.96900393310157	0	1.46461656537007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-99974971-1	1.71227179132104	0	1.73706060329135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144935806-1	5.29567121354152	0.674327560390976	0.861159606469317	0.783045971182581	0.433600116798688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.98209264290658
Merged-chr5-57478065-1	2.85313259695221	1.16648974558381	1.09423465341869	1.06603253876066	0.286408933115768	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.23396946753647
Merged-chr4-126030916-2	3.73710798093021	0	1.47469233046966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163851424-1	2.17546982543746	0	1.44200455820703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35722953-1	1.57174161841166	0	1.55229266777258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47792668-5	10.7620072338524	-1.04701032090681	0.703118223432788	-1.48909569687308	0.136462170787582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99059730437749	1.45451904642141
Merged-chr16-35817494-6	15.1168227912503	0.582932791375088	0.541094577262109	1.07732144410812	0.281336685355444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07573628624387	4.27070817859652
Merged-chr3-127295036-6	17.489032852782	0.43539902769013	0.44320152683545	0.982395143805052	0.325905217811991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24696817792736	4.60256232116104
Merged-chr4-150515682-3	5.96054012345279	-4.72237826888777	1.15275770387667	-4.09659224397863	4.19276463665059e-05	0.00285965486679661	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09283891567874	0.376242425970964
Merged-chr10-9893692-3	5.66426642461186	-0.25186535759473	0.910265605838615	-0.276694358195254	0.782014804315614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9450324219075	1.33501937324953
Merged-chr17-87140987-4	12.4049915752429	0.195267363193151	0.465667051241995	0.419328279018984	0.674976232087793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05962622664223	3.93998662852805
Merged-chr13-89904780-4	8.00848404767382	0.3226728789986	0.776414465108112	0.415593595301795	0.677707414093568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3356278069727	2.16696648475163
Merged-chr4-97885734-2	3.10727023997253	0	1.40120384411868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81796731-3	3.33365428324381	0	1.40085433750941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29241886-3	4.29696863223753	0	1.38956725820527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139434252-2	2.95005561180453	0	1.39147100659673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78485484-3	4.50446003904984	0	1.37868079799419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40082656-1	2.76561390575547	0	1.37589566379682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107826660-2	8.04400782369424	-0.60582246868849	0.777959550535771	-0.778732606690499	0.436137244280185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03053138243821	2.07322924255145
Merged-chr12-51355473-2	3.31554932729703	0	1.42940194456616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43806144-4	4.50321085476246	0	1.37829564557379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45757075-6	12.7441862266302	0.338189755068041	0.460470622841257	0.734443715391218	0.462678351933719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31769483219531	3.82350968677417
Merged-chr15-85710399-3	5.07712377242052	1.58360141418566	1.12299955288409	1.41015320096846	0.158494451068869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.338064021838
Merged-chr10-8754315-3	4.28605228114094	1.27625833416907	1.36154457177862	0.937360671565726	0.348573063849586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr1-153443871-1	2.74955057630676	0	1.39708861926782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127785655-3	5.99905845606327	0.335358500893107	1.0204200943544	0.328647488175233	0.742422149670863	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.18909650862134
Merged-chr3-86758776-1	2.44366445898578	0	1.44097352549856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24703729-1	2.00230973590801	0	1.53914660977028	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-43383210-1	1.92226450805814	0	1.47111077454852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67657879-1	3.01603850953297	0	1.43405709429111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128573354-2	4.42843423174635	-0.0319844179930721	1.22802073835254	-0.0260455031370081	0.97922104449242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr15-93251951-6	8.5851224772266	0	1.38296548378183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-92150844-3	6.37870294394101	-0.444971914642637	0.704303973328273	-0.631789584460058	0.527524380462243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15961505864417	1.99365940364111
Merged-chr3-154269954-3	5.14442487909406	0	1.36594251867252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156614408-3	8.20078740617807	-0.250831010599406	0.595588623492473	-0.421148088975504	0.673646947964403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6659531256002	3.44000342024841
Merged-chr12-25492963-3	3.71446598848012	0	1.40482260573065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50419077-1	3.65059939166551	0.909547293162912	0.93204722304809	0.975859667483804	0.329134011407853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	2.13118170172995
Merged-chr7-103712202-2	6.13755052196574	0.372991040728794	0.688793061055402	0.541513934761885	0.588153395569961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74866674342004	3.3392856375198
Merged-chr8-25256128-2	4.37528600301468	0	1.38129461955596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70848622-2	3.40666686431768	0	1.37865820991767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148742852-3	5.67052858768619	-0.163111456915101	0.760575503053881	-0.214457941729877	0.83018996156986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.90216338684418
Merged-chr12-5226912-1	2.47066370019746	0	1.4525816730024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31432964-1	4.09445871590191	0	1.39157127795195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56375709-2	3.60205373875223	0	1.39468878290572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55811836-4	4.84631723559082	0	1.3912056610755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67189196-1	3.16776504031892	0	1.40992566418948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69515290-1	2.3030428307963	0	1.55824539714144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67778225-4	8.50865422768742	1.35513971946891	0.808137634535602	1.67686748093058	0.0935683983982353	0.873032023434548	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	2.43587102360001
Merged-chr4-102609163-3	9.10839319021946	-1.83754184281775	0.889067804213957	-2.06681856446524	0.038751253506209	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24969713319017	0.97908007631626
Merged-chr1-161999599-5	12.4875999172238	-0.370014957483309	0.470261337920165	-0.786828360417172	0.431382349155125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06769299193684	3.9801884700129
Merged-chr9-120601648-2	2.81887716531368	0	1.40466620044439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34080045-2	3.53663445552798	0	1.4035398589633	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90553990-2	6.80506577913944	-0.366157189245437	0.880447736705463	-0.415876120728706	0.677500653936122	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40684701627341	1.20194974038739
Merged-chr9-123999949-2	3.7485721638196	0	1.38226807693036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66615271-1	2.71113063464659	0	1.39247836023419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78915115-3	3.47731998992994	0	1.3837939494951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5798016-3	8.40392627457952	-0.487063239310269	0.739865614960038	-0.658313117222749	0.510336950908809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	1.86575916392988
Merged-chr1-53773272-2	7.71618161857881	1.44428678033312	0.654707148530023	2.20600429302765	0.0273836991222458	0.39882332187484	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30219722357347	3.33310512687289
Merged-chr3-81110129-2	4.64103942420566	-0.619998601009227	1.04662892369217	-0.592376712485711	0.553598356878681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.28067447403188
Merged-chr11-120853738-2	3.60894226624946	0	1.37336961836214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-56375931-2	3.48046994560016	0	1.39239758497762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157357014-2	6.83939194512855	-0.153358580578813	1.02925728568195	-0.148999266473206	0.881554211773556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00129118555875	1.67285245412069
Merged-chr8-34188876-3	8.09209908275638	-0.783866796122255	0.942891286020231	-0.831343769684001	0.405779454864448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	1.02186287315087
Merged-chr18-77949709-3	3.63470319718417	0	1.3797219973594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-81916286-2	4.30666499917076	0	1.36693173358008	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81122680-5	11.7057646588899	-1.21911421358574	0.725085997796761	-1.68133741003153	0.0926973953494292	0.86683944844308	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86993606912592	1.61055102041193
Merged-chr8-70598540-4	6.1683104117028	0.11007921496841	0.685428027953442	0.160599232128113	0.872409059720447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57074540165941	2.11518404902724
Merged-chr7-36690691-4	9.10972839946918	0.20899400578864	0.66202961387678	0.315686793170462	0.752240251996268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51189205336242	2.29110297178667
Merged-chr13-107449898-1	3.0631743647028	0	1.44331374415389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72177561-2	8.58357216423487	-1.03835598663222	0.573576376189319	-1.81031860749001	0.0702463931062595	0.733344283246238	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93345351219509	3.08017822154978
Merged-chr18-50229351-2	3.69921834563858	0	1.40600116086158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24991516-2	8.7151440752365	0.0672058360748335	0.574078153219188	0.117067398746968	0.906806644088818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23813714995767	3.14638743942246
Merged-chr17-70987039-4	4.43762675416045	0	1.36926828811924	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92774978-2	3.85540720261123	0	1.36788276668794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31104222-2	3.68405445381099	0	1.42724416719212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127267030-2	4.26936084666563	0	1.39346850554891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85239234-1	2.69943332945549	0	1.44326585293006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89703249-4	6.11977265340948	-1.51055204579521	0.663618269154498	-2.27623637866355	0.0228318656685053	0.352790615654997	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4780911357035	2.16685274122719
Merged-chrX-68741490-1	3.69919638460722	-3.83800261185615	1.17570926379855	-3.2644147069626	0.00109690483608374	0.0385530167181762	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76252157376252	0.41385117919798
Merged-chr7-31195493-1	2.80902909648215	-1.3093612651378	1.33449428921168	-0.981166630477886	0.326510576908641	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.465515277017237
Merged-chr10-114354385-1	3.81132309184514	-2.90272668543506	1.17181642175696	-2.47711726132226	0.0132448379006327	0.244973168914765	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1733994807395	1.17858215524007
Merged-chr8-125533935-1	5.47815515435393	0.250515593730902	0.764330749455526	0.327758099369099	0.743094570630991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77530737790309	2.77962687425905
Merged-chr11-99314091-1	1.07644594841469	-0.886517258380042	1.82989551326354	-0.484463321514448	0.628057088830487	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr10-111992761-1	2.0329537728322	0	1.4575328415077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89282272-1	1.7504085869532	0	1.46267988791499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104683143-1	2.82371661307218	0	1.39122967861064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105927183-1	1.6359807162073	0	1.50725510712438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171366610-1	3.5631854777748	0.033623339761314	1.03848068381244	0.0323774339623505	0.974171058140855	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7204458171722	1.67692428396529
Merged-chr17-53468657-2	4.77427043181505	0	1.37879605504685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71079275-1	4.32826288679413	-1.06784532341749	1.04978570555841	-1.01720314704559	0.309056799250618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68206090494699	2.89410684522111
Merged-chr12-34663918-4	8.11056182180939	3.64189440811662	0.858548497862763	4.24192042404432	2.21615274490428e-05	0.0017136251359922	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	4.11012329192197
Merged-chrX-144231624-1	1.32434478049153	0	1.54773500596474	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119843591-2	3.73675590760253	0	1.38792463998073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31755320-1	1.41172356065897	0	1.5206503914959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11602226-1	2.75140444446813	0	1.39444478490302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46006704-1	2.53038868916733	0	1.43890467947356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29944731-1	3.24752463360645	0	1.37056047081488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76456411-1	2.44905854786574	0	1.43071288140954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-73999173-1	1.74316456067638	0	1.5067621994204	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27120856-1	5.23895204930661	-1.14891429420348	0.929123666165443	-1.23655691491007	0.216251623664432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28797303502884	2.34706616758795
Merged-chr16-43363916-2	4.04121375722269	0	1.36803290822988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86272598-1	2.51057298527289	0	1.41852766600469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93241369-1	6.91145428751033	0.888525550517208	0.725075979603008	1.22542405970157	0.220415486392096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14276642658715	2.72413898490059
Merged-chr10-87812835-1	2.63475860547329	0	1.39628610102263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99093521-4	5.1079526136826	0	1.36377886758613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98539822-1	1.13444703762904	0	1.984564393874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165606279-1	2.41280356853747	0	1.44148315152407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172203764-1	2.85107806970393	-0.105467741226625	1.25155683123549	-0.0842692385950313	0.932842369429159	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.97908007631626
Merged-chr8-86825740-1	1.70399923641281	0	1.5236961957122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121070734-1	2.28953734353479	0	1.44817260571227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43266559-1	1.40028496629233	0	1.74721377349846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103762456-2	2.37252612086416	0	1.43795665835026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155380162-1	2.35409633184165	0	1.45534733472169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99187611-1	2.10379776129655	0	1.41108392269719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122573205-1	3.07070174926388	0	1.48104074104437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17723840-1	1.76685191364635	0	1.43855398632297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8823343-1	2.04511172627018	0	1.54211678521347	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38406916-3	5.28552128212737	0	1.41547656233211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86362898-2	2.30831213767613	0	1.45595863029634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-166708286-1	4.55668012863915	0	1.41159382861459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165919971-2	2.33886492405883	0	1.44733352990731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155715184-1	1.37365861534949	-0.858068798068205	1.83013829970317	-0.468854620553743	0.639173554777677	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	0.723581231604105
Merged-chr2-27732999-1	3.1135718678276	0	1.40322381865806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135534235-1	1.54389493096422	0	1.56883290153503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87149969-6	10.9843442778661	0.152710791563968	0.682884781177307	0.223625999250842	0.823048331475613	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36652910734487	3.40539315200495
Merged-chr1-46022440-1	2.05747178672064	0	1.42949046896487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74597204-1	2.06596989440393	0	1.47182901689908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34398883-2	5.55590080787166	-5.41789170144507	1.14269747967547	-4.74131762588974	2.12332742270074e-06	0.000239464637698319	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09331135573657	0
Merged-chr3-9605942-4	6.32647852062435	0.357539234737495	1.11626324703737	0.320300104555468	0.748740843904994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.08976818821237
Merged-chr4-139296894-5	10.1347126737212	-0.0231771221698748	0.538167549154933	-0.0430667404719386	0.965648331947241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96542035547584	3.92080334370151
Merged-chr9-104039182-4	4.83022722011006	0	1.36722226240858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66081182-3	4.83289568158278	0	1.38919527070797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91507799-2	4.83982378700044	-1.67949604047363	1.12588068372493	-1.49171760804803	0.135773191100218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	0.601513806634888
Merged-chr14-52083312-2	7.71100437938468	0.506854210439996	0.646499973609348	0.783997263929149	0.433041715757725	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00966469948822	3.48954203033264
Merged-chr11-86625602-3	4.43947850680255	0	1.38747984600281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-69823691-3	5.75570882107991	0	1.35722068798966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30512596-3	6.01548839755873	-2.1799660920772	0.938069006685115	-2.32388670400764	0.0201315670614557	0.321767672418015	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83635135426376	0.859510663435501
Merged-chr17-88345599-3	7.8045687666131	1.45535456797986	0.596604927566558	2.43939414633396	0.0147119121424057	0.263460932552523	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	3.80666361619219
Merged-chr13-105224218-2	8.71584916743728	2.65783025123883	0.924902547748434	2.8736327494275	0.00405780507322231	0.106354014452889	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.27479450122421
Merged-chr17-87314836-6	11.3948667288867	0	1.34255913630858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125531840-5	12.4064962609228	0.0825588067042366	0.496028759444186	0.166439556441739	0.867811046523746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84361775829564	4.18211050756857
Merged-chr6-99671000-2	3.32663338852952	0	1.42788435282732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84686985-2	4.43003687305575	0	1.38168557824181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101188208-2	3.68672907413304	0	1.39563857985612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57393428-2	3.29507806556048	0	1.4152584185278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134544318-4	9.1271441836417	0.311770951350259	0.710628119120782	0.438725886242715	0.660860167857162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08252407688104	2.96227705878657
Merged-chr17-86301339-2	7.46637409748658	0.844257711764184	0.769898960555681	1.09658248032292	0.27282394953073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20577486303198	2.47248588654001
Merged-chr9-86451875-5	7.30990130469416	-0.180242123173553	0.795034560470799	-0.226709796196555	0.820649409181351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18004862901573	2.06621232759638
Merged-chr7-105626863-6	11.2277533220869	1.3497943451481	0.708388416237491	1.90544384155426	0.0567224008778496	0.643441775734355	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	2.55114780540518
Merged-chr17-69223299-4	5.16105435637454	0	1.35653547349021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10438215-3	4.00284583411217	0	1.4402632500564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84141943-1	3.25646232600148	0	1.42524655510711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4329211-3	4.26252470546996	0	1.39583607573431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31713843-4	13.226673260265	1.62609533134603	0.606676564719048	2.68033318890285	0.00735489117481752	0.161929740531351	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83332077614228	4.53637806223712
Merged-chr7-83827163-1	4.48854538833576	-1.39647139141449	1.07042778415679	-1.30459187633525	0.192031855951315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	0.723581231604105
Merged-chr14-52100492-8	21.1122402963591	-0.246319443599509	0.413514885579672	-0.595672494967659	0.55139403625364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15296787088445	3.87012652764112
Merged-chr1-120098486-2	7.5563742670981	-0.311764879824328	0.659248570906512	-0.472909451128017	0.636277781819264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00318142357692	2.69672793688556
Merged-chr17-87561119-4	4.24987515324487	0	1.37992993212445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-93917375-3	5.09311522792245	0	1.38244225626398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57429097-2	3.14126129323109	0	1.40008325044764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72903616-2	9.31775463277526	0.635683867843082	0.657134120203798	0.967357877636815	0.333365159559482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42844712608471	2.87055365283358
Merged-chr1-134066314-1	2.2797933786546	0	1.44426538609808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12123791-3	5.18759134088253	0	1.38059145778088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34651756-2	6.59115362880384	-0.441173542207052	0.719369744938689	-0.613277866230881	0.539692625981892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63231688881126	3.23312044955494
Merged-chr18-36711192-1	3.24407476963103	2.23238088566242	1.218984772648	1.8313443578241	0.067049160755962	0.713812246285417	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.67689200618025
Merged-chr15-85670612-2	7.61145238683793	-0.185741291168347	0.791026269241199	-0.23481052196474	0.814355800698519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02790914983068	2.84658174566459
Merged-chr14-47382791-2	7.64305143576668	-0.310044765211758	0.744842832614802	-0.416255284518659	0.677223209250245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66787678648267	2.71159914715543
Merged-chr4-133250833-2	5.69668326209386	-0.0383296297429993	0.737116534391213	-0.0519994165843206	0.958529158284881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69834553060969	2.86921200909576
Merged-chr4-16044874-2	2.95295502505827	0	1.45125657790225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167961244-2	3.81015892937325	0	1.39934578374668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34002412-2	3.4088260366398	0	1.39304036153857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-93705243-1	4.39524793610062	1.60079023308199	1.09294520138499	1.46465735981406	0.143014423978167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.1304360554358
Merged-chr15-3340078-2	2.56862063239586	0	1.45222660720417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107138788-4	10.7108046577615	-0.77502264283087	0.643151260142707	-1.20503945317452	0.228188071595871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8419430189097	3.1429116554375
Merged-chr17-17590644-4	5.63940369153049	-2.10245330835551	1.23015297801051	-1.70909906811407	0.0874326001847604	0.837193713835369	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.41385117919798
Merged-chr15-94948277-1	2.89470919261076	0	1.39228511690782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-25862971-3	4.99149735084785	0	1.3724034666574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124090658-2	4.1347757459727	0	1.36753569057538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96982579-3	3.63445065694796	0	1.39375202232865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93174565-2	3.21015313095824	0	1.37366570863923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45023026-3	7.60856332546545	-1.81196751698846	0.733573923396413	-2.470054426961	0.0135092496486261	0.248314577329982	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98151865472676	0.988408630094828
Merged-chr6-17589863-6	11.0978874451814	0.0853617512649886	0.613009823237246	0.139250217580856	0.889252427125901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74586965235421	2.85038456186507
Merged-chr7-102636864-2	5.50774353563619	-0.539249164134295	0.919027221235294	-0.586760818041356	0.55736435524549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8131505516485	1.21849460895724
Merged-chr5-38309091-2	3.72404502564283	0	1.38932959617855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13950877-2	4.4583666043829	0	1.37321908275533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77896181-1	3.03769967824161	0	1.40994205272396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96586502-1	2.02412419342274	0	1.43186159659511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133086084-3	4.17919643087244	0	1.39503251118929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20470633-4	3.98679019176258	0	1.38358125528411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145124441-2	7.70436943075226	-1.88008937680057	0.871642140355174	-2.15695098912321	0.0310094834081909	0.431884321953843	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84940824855803	0.815775955292901
Merged-chr19-34199136-2	3.09791432804665	0	1.38710023644512	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102616153-3	4.29881160998766	0	1.39290386536224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71337770-4	4.27095419170299	0	1.36905698926293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128203313-4	4.5927548855683	0	1.38289235681763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98019512-2	3.78242878194477	0	1.40498100729069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21550343-3	7.17096009066879	-0.199797950701472	0.900508279838634	-0.221872419359958	0.824413201591392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	0.94927122251658
Merged-chr14-121598922-5	12.5896134323904	0.232718241653166	0.53080144723234	0.438428046620042	0.661076018981163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17913866312903	4.21105717039466
Merged-chr19-21942540-6	13.54761313768	-0.0944723009302332	0.511288667599298	-0.184772921672248	0.853407147500549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08809569403435	4.04504407386192
Merged-chr14-76193384-2	3.12466758741017	0	1.41409774314506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-24468603-3	4.32173509360968	0	1.37889696732206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75943714-5	12.8548213569486	0.925569639173484	0.514716016656152	1.79821417873576	0.0721430735167241	0.745556147014374	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36408801148444	4.35679582889695
Merged-chr2-166516481-2	4.2520158385365	0	1.40516908493872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48876722-4	4.62171599728987	0	1.37059527333843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19920026-2	23.0332366571626	-0.951163203881667	0.480774480502758	-1.97839786106578	0.0478838408492039	0.572951288734729	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75834644835191	3.09745033373152
Merged-chr11-120355769-1	3.24031101872695	0	1.41534939819771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-58383111-1	2.73388773854072	0	1.46275909444869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-139065123-1	2.56528828624218	0	1.40736977845201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100419356-2	1.90384889582473	0	1.60208385209021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30010618-1	1.84246894404283	0	1.42449395329542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25115455-1	1.57446396897516	0	1.5392484416608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26909472-1	2.36795652028857	0	1.44602591424972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20280595-2	4.47205320122205	0.618409290200845	1.42907586936757	0.432733701167678	0.665208243392361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chrX-168913700-1	1.82654409646392	0	1.42373845418802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88523641-2	3.41436072691689	0	1.44912212043201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116647936-1	2.31288527125997	0	1.44967679107743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34342829-2	3.34849502585277	0	1.44260119391405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45479075-1	1.51245914605245	0	1.65000593091813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104595226-3	8.16005919430275	0.0213773949110661	0.628371654294932	0.0340203043293745	0.972860959558172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09606202795606	4.15265898669791
Merged-chr6-112721694-1	1.45458504942205	0	1.59317192697913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145780165-1	3.42509514561373	0.657083002977822	1.09201020543736	0.60171873825543	0.547361374734934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38601560292234	1.61055102041193
Merged-chr10-120064662-1	1.84397417434602	0.616325041051483	1.44978076737985	0.425116027829056	0.670752094425257	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr13-43445032-1	1.82685013998047	0	1.58872210609048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45362891-1	2.05705946829084	0	1.4669042371092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68191566-1	3.83115623274518	2.33559297565262	1.04884918138733	2.22681489112029	0.0259596477532762	0.385684130185744	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.93127101791177
Merged-chr8-122428432-1	2.05992323574724	0	1.49649995492967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20272846-1	4.14099198489069	-1.94132221235788	1.02613209818385	-1.89188333138962	0.0585065271342659	0.655908101470409	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63528578347693	1.39020008251549
Merged-chr8-117332422-1	2.09423811765056	0	1.47081389883008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31950539-2	9.58295185267962	-0.542829726536688	0.577820514575357	-0.939443499917299	0.347503087930211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19957091424391	3.72445432578217
Merged-chr11-79460942-1	2.1555405541945	0	1.40838856283169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145823987-2	3.4968737637032	0	1.40511855273725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7569845-2	3.10200858106084	0	1.41246089213642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106769965-1	1.50773591100747	0	1.52757246105511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69908237-1	4.04032003131544	-0.0350341236093443	1.14462120824865	-0.0306076135553603	0.975582470256821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr15-74926056-2	6.19383962457271	0.39116943439657	0.78274979953666	0.499737508240971	0.617259918073202	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72065437544902	3.02046200754364
Merged-chr12-59195371-1	1.08199911778987	0	1.74605163089394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79197600-1	3.18549135159766	-0.0354506123964192	1.43337331952368	-0.024732295427544	0.980268494927991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.303163067301871
Merged-chr4-141156469-3	3.53708463924511	0	1.38797472294747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-64873499-1	3.5972902182826	0	1.38010771620183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8728386-1	1.52411844779415	0	1.45771982091774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68945059-1	1.40989860162468	0	1.52627801561351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71821398-2	3.31235827291552	0	1.39877519106881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21430219-1	3.67995350097487	-0.166055016235648	0.988660038633884	-0.167959672432093	0.866615005040851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52863192190685	1.88552350992749
Merged-chr15-42463498-2	3.79925680698513	0	1.40223069920002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76392844-3	5.96582074416593	0	1.36282182632474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103312194-1	4.24673063207948	0.887182461346449	1.01155765181665	0.87704587054743	0.380461723640285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22237730641564	1.46460328489499
Merged-chr18-84439042-1	2.31319379343717	0	1.45235574075437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3483043-3	4.41011341609612	0	1.37666695266652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-58559322-1	1.83596175459725	0	1.45916055787131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21524232-1	4.74559834863098	-0.0376476848312953	1.0022817323396	-0.037561978450326	0.970036923315491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.27743081564928
Merged-chr7-137414962-1	2.47929428891163	0	1.56059812830089	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45452973-1	2.07193064370061	0	1.51362865392758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35840280-1	1.74182750465154	-0.413968496499439	1.62141344537996	-0.255313348781581	0.798481090678458	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4944959016211	1.30064958020929
Merged-chr4-123305997-2	4.52687010762531	0	1.38190534310678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21566160-1	1.76594122580132	0	1.57227557707406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133513185-5	11.8507043879526	0.139256540385271	0.503968986870197	0.276319662545303	0.782302555071614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1251363054998	3.45801109374523
Merged-chr18-23812370-4	10.6777246331231	0	1.36621196412601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32499894-5	12.1710141311279	0.281456398715094	0.531217027746469	0.529833164251321	0.59622760904111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42322776620546	3.08112384205941
Merged-chr19-38030910-5	17.2194505296701	-0.240178987259437	0.400240293635113	-0.600086975446806	0.548448272295199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.7515726072894	4.49965975958643
Merged-chr9-94716892-4	4.78200855160953	1.80864922586505	1.27843474734476	1.41473722426703	0.157145555930705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr15-25831541-3	4.68116209396387	0	1.3788308818945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134919844-3	4.3330246464897	0	1.37705292000122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46080475-1	4.19617818252808	0.156858582210745	1.15383171769228	0.135945805445937	0.89186412407118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	0.948404007588321
Merged-chr13-107873323-1	2.90665152346061	0	1.39289914241405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100191372-4	3.97617110201112	0	1.39187429240248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85512441-2	6.43459445140322	0.295542867415778	0.845108779557765	0.349709853411335	0.726556458115624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	1.62805269464997
Merged-chr7-100988253-2	4.40674737293309	0	1.40626806684038	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58506140-2	4.0407519895307	0	1.39118682899132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88754487-1	3.5743297251265	0	1.40921723897011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91880094-2	4.43000163775905	0	1.37416414997477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46153848-4	5.5333816887544	0	1.38206026427606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148727023-5	12.1736489584426	-0.1256010666716	0.590520582472691	-0.212695493433386	0.831564482061076	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99265985842963	3.83410949261365
Merged-chr12-108338744-1	2.15125524105263	0	1.54046953998612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65272321-1	3.08716530302083	0	1.39359422065494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3428983-1	2.64753419124147	0	1.3927258161831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75370691-1	2.28486272895622	0	1.40289481044429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100434015-4	6.24744069162256	0.6272144363464	1.05989199983521	0.591772026247879	0.554003257766766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.730937814817307
Merged-chr7-74665100-3	4.19021511160536	0	1.37385860587905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122126354-2	2.99894272957568	0	1.3916552123887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69390607-2	3.35302948529743	0	1.43252405580678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53937357-2	4.24140890359195	0	1.42491159572464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30474787-2	3.00648019763393	0	1.45921687919031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-39953733-1	2.5424076022159	0.844076112328164	1.39171614004508	0.606500196441513	0.544182651944236	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.990919527803163
Merged-chr9-22230751-2	3.42334776311828	0	1.37422586263444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76312849-1	4.78466232417347	2.34650918523375	1.18211659114131	1.98500655757504	0.0471437419206559	0.566966076784278	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.4277097602107
Merged-chr1-165845549-2	2.72571118608766	0	1.39586382137732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145830073-4	7.4166038190432	0	1.39191347245228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-101555869-2	2.43671067636205	0	1.50305474959123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51234637-2	3.5588573020701	0	1.43202681283573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71228414-1	3.00771986357211	0	1.37538495259448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-8683234-3	4.64890688805199	0	1.37056073498215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-152140659-4	4.63261249079879	0	1.36633005827113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32146658-2	7.0558580895519	0	1.37372078039497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43404655-2	3.42168811038483	0	1.38372034308196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14815236-7	11.935197895004	0.15303662382523	0.577390106090652	0.265048919631475	0.790971776577273	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93255404292541	4.09783487819715
Merged-chr6-145750711-2	3.04575891278722	0	1.4164345560468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35580039-3	11.2249413676056	-1.06119674900694	0.662615022944726	-1.60152835698001	0.10925994448488	0.962135318686799	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19912636813704	2.97896998079456
Merged-chr8-25972782-2	8.61570591971813	-0.350717566433583	0.661705733058913	-0.530020444000532	0.596097756316388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49244636588382	2.44212596260939
Merged-chr10-14209583-2	3.32041344651965	0	1.3901609431866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101982213-2	3.06581602863362	0	1.41627508262416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48923822-1	2.25807734492373	0	1.49490685302999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13640457-1	5.81713064391029	0.341606226646066	0.665887163208179	0.513009178612545	0.607944900180661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37528155229931	2.98831297976427
Merged-chr3-93362092-1	2.13847515432307	0	1.4043346107295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127123633-1	5.06899227764045	2.88476192046852	1.08647961069192	2.6551459337846	0.00792741052657657	0.171752135836658	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.24718772929244
Merged-chr7-16228297-1	4.82017203530851	0.413917986508121	0.758400557913803	0.545777534297601	0.585218867823043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26085595654656	2.6570891764247
Merged-chr4-137076194-2	6.15369879245685	2.4676108957443	0.943834510314721	2.61445292450843	0.00893704753283626	0.18641940400516	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	2.72335930727865
Merged-chr12-73633873-2	5.45844618868167	-2.62395209047895	1.11560805451794	-2.35203759945312	0.0186708875341131	0.305886309664513	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38099347700105	0.716426531808663
Merged-chr9-69441126-2	3.28037799683396	0	1.40826772355384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33191869-1	3.2980976899177	0	1.38197907644585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70682365-2	7.11022390711348	0.478178658288824	0.823356414976491	0.580767514032763	0.561397152356561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14836790296005	3.05788296014251
Merged-chr11-53788502-2	2.67438952913828	0	1.40700462197917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72580403-2	3.11651442216883	0	1.40301993043817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33497151-3	4.05543926471664	0	1.38526147473047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6570634-3	4.71301890516514	0	1.37901806168578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79399611-1	3.33864091323465	-1.65795087712737	1.22219883906677	-1.35653121581535	0.174930210276646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.465515277017237
Merged-chr3-34033979-3	4.1733715308201	0	1.38047454722478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133475572-1	7.16275309258769	0.622614191454176	0.684521393565672	0.90956133337335	0.363053898244536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17343914874612	2.97418128074369
Merged-chr1-183657267-2	11.8298340307401	0.470264032233118	0.495655716679478	0.948771529124158	0.34273682514511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0390451837193	4.10683776222928
Merged-chr11-72466471-3	4.47263091748517	0	1.38305428415667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19875014-5	13.392531303672	-0.812647053995099	0.511213035539467	-1.58964462464761	0.111914932267194	0.974933301780835	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85603478869005	2.94805663181161
Merged-chr16-12089849-2	3.33622326357632	0	1.39118225713904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35903520-1	5.30398362940851	0	1.35902692893826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89015095-1	4.32227853636228	-0.536793364304765	0.928728103743065	-0.577987639376174	0.563272464429335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6585960826409	1.97473605969338
Merged-chr6-3475144-1	1.7564833324493	0	1.43208831660043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117471412-4	4.906249606386	0	1.36800188563025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107321738-2	4.01366971091111	0	1.40309671856848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129472114-1	2.16685164762192	0	1.47037242152947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29902494-1	2.40879655567467	0	1.52195474498996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103702772-1	1.99054054477534	0	1.4737186447372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112387496-3	4.06562797773736	1.47921995857368	1.26288234636046	1.17130464515296	0.241476344948398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.97908007631626
Merged-chr19-21510323-3	6.52118107092293	0.0814299648914498	0.75329302016024	0.108098658439883	0.913917432329207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	2.06239089973625
Merged-chr17-79584663-1	2.24054246287707	0	1.41785458996075	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40963062-1	0.992187869528834	0	1.61561848032858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157808060-1	1.27437090334519	0	1.85985763217279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97463010-1	4.46469882488359	0.275069604633544	1.04874978002968	0.262283349061355	0.793102998320787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53350380922037	3.23909369368793
Merged-chr18-75501793-1	4.44476632429273	0.889711896535796	1.01666652768384	0.875126575242654	0.381505038664033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	2.11639961854063
Merged-chr4-75259536-1	2.19085268617982	0	1.5055317878472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10920420-1	2.11720785204069	0	1.44157531529142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12814025-1	1.88053835461997	-0.142935128140326	1.30036022528509	-0.109919640235834	0.912473106270406	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0.897114879832661
Merged-chr11-46833520-3	7.39130861530379	0.717077435269511	0.763249872968704	0.939505476077444	0.347471282014922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45063110846411	2.50080554775046
Merged-chr16-31355106-1	2.64818293329122	0	1.41566601870239	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79123582-1	2.90062051296431	0.0930900584125166	1.32181197220991	0.0704260971830064	0.943854520265814	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.28311275482176	1.45451904642141
Merged-chr1-82879434-1	1.70156460744195	0	1.54677042277875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-77983617-2	4.16568692060745	0.239515973026531	1.03555817371241	0.231291663864601	0.817088222402675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73293320956166	3.71601938373985
Merged-chr8-8013555-1	1.89623346021552	-0.589046243741814	1.21664078916809	-0.484157895235937	0.628273815873827	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.06702908365212
Merged-chr6-49973706-1	1.93001543841323	0	1.43320202565989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84313720-1	2.33466590925482	0	1.45391854037363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129669298-1	3.42669105291036	3.09535715913381	1.40150669855103	2.20859248288573	0.0272029986781479	0.397721303159075	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.993299420549897
Merged-chr3-146154946-2	5.06480028796989	-0.0409090812921057	0.949798303829948	-0.0430713353847282	0.965644669135995	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86737052669785	1.84252025419888
Merged-chr10-96298758-1	1.83149444962306	0	1.5162626522133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120821082-1	1.37943566324012	0	1.57056682564874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37026613-1	3.20184651221318	-2.50614270301836	1.33983277482474	-1.87048917604377	0.0614159186967737	0.676907527258297	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44636763492635	0.600815099743027
Merged-chr3-101552803-1	2.53581711675323	0	1.47144622333593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15988361-1	2.85401014301926	3.02653450367537	1.51640229617256	1.99586515485662	0.0459486024482266	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	3.07686343353213
Merged-chr10-68147054-1	3.8817306110562	-1.50370294319171	1.04792062774378	-1.43493973053022	0.15130427277333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	0.903978167044898
Merged-chr10-127617501-1	1.93691341314748	0	1.48920292606902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124640179-1	2.29474473217051	0	1.41837900086293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32195458-1	6.36400815437063	0.0196138637601415	0.798519167998723	0.0245627964188993	0.980403694496689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10134524129244	2.38322012996407
Merged-chr4-140539477-1	4.37096011576552	0.92365665799701	1.04046590090549	0.88773371351543	0.37468400650478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96073424694151	3.01781077543382
Merged-chr10-84146328-1	1.59050179325335	0	1.48364252831205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61029381-1	2.49005152499892	0.206158082613909	1.35919081919044	0.151677071168492	0.879441642465791	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	1.21849460895724
Merged-chr14-59397147-2	2.84847075055406	0	1.44781463504828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42436971-1	1.27652657198926	0	1.69511962592969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83645352-2	3.34025200194921	0	1.4026651695902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120749611-4	4.71216906195678	0	1.36319584278245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75588762-3	4.41246294894719	0	1.37210097985531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157285550-4	4.66223183512333	0	1.38283300376617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34193544-2	5.68111286416247	-1.05804256674651	0.961383680421558	-1.10054142616875	0.271096290399068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86728154592049	0.97908007631626
Merged-chr1-16505120-3	5.24694455578704	0	1.37917242901805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38335584-3	4.36518668879376	0	1.3652670235035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16079244-2	3.66276265950335	0	1.37950188502897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50436632-1	3.06561083763383	-1.81327983877458	1.32414925823724	-1.36939233058099	0.170876670329028	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.41385117919798
Merged-chr14-25607462-1	2.91638563819865	0	1.43051965425605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70005294-4	4.30511816841545	0	1.37667007435833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113308920-1	2.45208155316438	0	1.41146509206771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50865554-2	6.50421213227556	-0.430649093966556	0.725356097981639	-0.59370713938281	0.552708007112208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6224243831678	2.24631017169283
Merged-chr13-49321644-3	3.83084459892012	0	1.38590435918449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4521119-3	3.97222221485438	0	1.38347157028093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59064134-2	3.35280185627085	0	1.40804444306065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145301287-2	12.2107168664738	0.213408569637332	0.537798228815949	0.396819026546789	0.691500919086771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.64948622626823	4.93843377280072
Merged-chr8-56896148-1	3.02612722613036	-0.113347721226685	1.20289131719916	-0.0942293951298989	0.924926934717749	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.577068348605183
Merged-chr1-172468667-1	4.28992791781546	-1.60864763825284	0.975889902659036	-1.64839049350722	0.0992725655476323	0.906931141644847	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39508237167053	1.82000841559213
Merged-chr16-3239511-1	2.65951976506586	0	1.38164331935648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18927527-5	10.1969661870408	0.486814714869827	0.481910317778207	1.01017699125894	0.312410500720964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0225639444915	4.50704023724659
Merged-chr16-21392913-3	5.06172178574355	0	1.36018131409059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126928871-1	3.8342604023484	0	1.39790646010508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152592632-1	2.37102196567969	0	1.42897871977413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150213422-3	5.15394785116364	-3.54486058012306	1.15705364418312	-3.06369596426598	0.00218620968822152	0.0667266549365713	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1552264446993	0
Merged-chr3-31089199-2	3.13000816371106	0	1.46629199561949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43352753-2	4.50278267501752	0	1.36030970154336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167980565-2	3.83260862334184	0	1.42220507155733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37120429-2	3.03650243635039	0	1.41314136924284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100697622-2	4.09706033181792	0	1.40534589644799	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69545227-5	12.0395302626754	-1.17508967676789	0.537709703664016	-2.18536074160592	0.0288624069620414	0.413747779548947	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0224084544899	2.97055275650852
Merged-chr16-65453978-5	10.1064253379912	1.1537750731313	0.712199722537783	1.62001617891686	0.105228801526131	0.941120832865901	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	2.91149846128121
Merged-chr5-5243794-2	3.98340500459449	0	1.38305561784085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95425086-2	2.79259495503126	0	1.3946184768554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119836117-1	2.72141760205113	0	1.5823759863322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54129840-2	4.71617176096546	-1.42807789598343	1.12388331951644	-1.27066384132996	0.203848264439623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.601513806634888
Merged-chr3-108878559-4	9.6860048011489	0.905903191929839	0.806513978643238	1.12323309442671	0.261338510582404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47190689055611	2.01960854862221
Merged-chr10-42637396-2	3.2007870535236	0	1.39495486805991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143471755-2	2.6910318350814	0	1.41572416303729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73408455-1	2.82878741839568	0	1.43721826703046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55475163-1	4.4094777621572	-1.0603286201373	0.963461114602216	-1.10054116774093	0.271096402930154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52193773039031	2.23396946753647
Merged-chr7-97076748-1	4.07433487603168	0	1.39319855089998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60707245-1	1.8398675189836	0	1.45157557855518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87190547-1	5.0126199150907	1.14232816784996	1.040278323886	1.09809859690506	0.272161437973581	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.04759465321635
Merged-chr12-12267236-2	2.28271623659532	0	1.54903875206436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107963870-2	3.6153236646913	0	1.41773370344998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113663088-2	4.38813728373485	0	1.39785721180755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22649779-1	2.1828642680043	0	1.40566345547432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43903027-1	2.22061905257637	0	1.42208837841288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129301476-3	7.59385437270337	0	1.40683116514174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184023291-3	6.91350919355835	-2.77727132087654	1.14840563145688	-2.4183713879505	0.0155901557220599	0.274025237602637	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	0
Merged-chr9-55244265-3	5.1670874118386	0	1.36380672684872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75639625-2	3.9809220521684	0	1.38558241454511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10005422-4	5.72916259605688	0	1.36881654440728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129630727-2	4.29558398131928	-0.861341161663739	1.0057957001636	-0.856377852404457	0.391788811146162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	0.97908007631626
Merged-chr16-50000977-2	3.76628161077244	0	1.39740228429718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23975313-2	3.37752584127844	0	1.42582029304131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63827631-3	8.6095894938727	-1.1799043465161	0.832492051973273	-1.41731604970804	0.156390544773888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00266078024517	1.57989517605929
Merged-chr2-70838697-3	4.23707014804896	0	1.37677373958192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92411607-1	3.49128236492623	-3.30528889119959	1.20226346494901	-2.74922177007164	0.00597369538994145	0.140436128477419	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	0
Merged-chr17-22410952-4	4.41164819578689	0	1.38581705329425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114079995-1	3.19237562674865	0	1.48489677300419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59212491-2	3.78610121744531	-0.557232658177434	0.781869424912646	-0.712692734134847	0.476035913567793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26028312783496	1.51301315377886
Merged-chr11-102456235-5	14.4801836780831	-0.828853191320008	0.556998468369903	-1.48807086264655	0.136732206645816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54134420641385	2.35163392625407
Merged-chr14-57372574-3	3.97178936922907	0	1.3829860274335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97939040-2	3.26879730225003	0	1.41332658372947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135467426-3	4.99383372081326	0	1.36496338145127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38494885-2	3.12460751624118	0	1.3735277098599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32646179-2	3.31861555697212	0	1.39489748146944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-6142724-2	8.74555078213219	2.52871329215917	0.655730142455279	3.8563322446804	0.000115101023047375	0.00661392865944215	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	4.89630398574975
Merged-chr13-30834538-2	6.12090790840882	0.53484531427417	0.905342383774332	0.590765796299543	0.554677355468596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20997209872237	1.3626301568499
Merged-chr10-80596268-2	3.88185376986975	0	1.36357950077105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123525353-3	3.41118753088887	0	1.38232561499947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42391429-3	4.56970061182552	0	1.38984968057811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12416458-3	8.73953049748993	-0.760132668352619	0.605074702495328	-1.25626251637663	0.209020807272091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33873882906569	3.05372613618122
Merged-chr13-23772753-5	12.944848661838	-0.0826227278957604	0.465185314518634	-0.177612502624373	0.85902730499372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33340331129168	4.19019698150135
Merged-chrX-99066762-3	7.32309175748902	-2.21670516170797	0.91579817954606	-2.42051710870046	0.0154984499674538	0.273177769708438	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86347454477436	0.67591700901439
Merged-chr10-75289622-1	2.89188471245016	0	1.42777018589395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138089724-1	4.66746242345856	1.18437267222058	1.02170063840916	1.15921692489564	0.246367774290531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	1.68673094143864
Merged-chr1-36088004-1	2.15072299119324	0	1.48813428984493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23794148-1	2.32802086424853	0	1.40059792659546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30679093-1	1.85891255172893	0	1.54920667012585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46550164-1	1.55236167694756	0	1.51782457273047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-39182933-2	3.21932115587508	0	1.44521163656916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68136214-1	5.02249573750492	0.845428988840937	0.82945216841839	1.01926189481548	0.308078649166242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	2.43227527902726
Merged-chr5-115174742-1	2.07701513900953	1.85160144049009	1.50972808568575	1.2264469728329	0.220030518639613	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr4-48075687-1	2.42432539451999	0	1.48661807603512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135066948-1	2.07668381508162	0	1.45297975146756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113062449-1	2.84305321761048	0	1.40673399897673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123489258-1	2.30004862321844	0	1.56431389237868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123016175-1	3.31223087297986	0	1.43406104487614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53948765-1	2.02345298005165	0	1.44425963262536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37342454-1	1.59606633034472	0	1.49605517173771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20215467-1	4.91673552474746	0.320918867583137	0.692256884848082	0.463583497119807	0.642946180175318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31480678761111	2.51010240258394
Merged-chrX-140492472-1	2.22268754426104	0	1.53396696751631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181529269-1	2.08124998049304	0	1.42910412986162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99994188-1	2.89940603486894	0	1.38604872352344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22090100-1	2.48280846252832	0	1.41579269285248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-13271991-1	1.16923914258516	0	1.56076791726291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128804327-1	1.97728158082527	0	1.54847701321766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33246597-1	3.19862070365617	0	1.44661217396337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55850073-1	1.6625735093675	0	1.51888775479597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72383490-2	3.27702441623159	0	1.40622977704157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133083955-1	2.38846039457243	0	1.44014571171889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-87137185-1	3.49811222176991	-0.278295639065418	1.36781390062035	-0.203460162920702	0.838775379812313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04181016172925	1.25163494309627
Merged-chr4-138930683-1	1.5597955606579	0.203426075065106	1.55364283089783	0.130934904097327	0.895826802883994	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.788686275880602
Merged-chr4-82619755-1	2.9752503993885	0	1.39265981833337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22297164-1	2.56027375793475	0	1.50865101964086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99338052-1	8.49514679725658	0.420151181443658	0.721104544134553	0.582649471371604	0.560129294768576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	2.35031680267015
Merged-chr13-49267845-1	2.63369560543483	0	1.43563927644856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97335641-1	3.4046434559402	1.8730413807829	1.07504561068883	1.74229015230597	0.0814576857201154	0.802401508058335	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.05692240690225
Merged-chr6-115803706-2	3.45421347199284	0	1.38828542059745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65547055-1	4.240606882883	0.265673139300666	1.09497969606402	0.242628370421521	0.808293301390221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6206607351343	2.71503556056728
Merged-chr5-143626424-1	2.12002997009617	0	1.42477095685608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43689299-1	3.79931437257827	0	1.37656400495894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7077373-4	3.74898344056102	0	1.38624009284511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56075442-4	5.30113389741063	0	1.36381840152161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103592972-1	2.05521891965995	0	1.43247765359487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48149434-2	2.30778230145228	0	1.46315220601411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80195532-4	8.20712711913175	0.209489207412555	1.00504454759425	0.208437733346253	0.834887196320747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29835464915396	1.13341594473881
Merged-chr10-13048850-1	1.54007591300334	-0.680825708491512	1.50299398505947	-0.452979662765965	0.650563385980494	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr16-78306568-1	1.66947816412695	0	1.54410043238675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19930361-1	2.25028232904163	-0.0384886998997494	1.00475688129612	-0.0383064805190482	0.969443323873267	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21225560339436	2.18140898269418
Merged-chr15-9955163-1	1.45175611267913	0	1.56414258402062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25226655-3	4.48915078408741	0	1.4014941897233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-159334428-4	9.06886177248405	0.540333886371043	0.598532365328321	0.90276469188871	0.366650794028316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03824771725394	3.52387910329692
Merged-chr6-134082590-3	7.60961590771979	-0.453036409494218	0.883070376599845	-0.513024127520367	0.607934443366424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	1.57989517605929
Merged-chr18-26740450-3	4.93248777873367	0	1.3605642876307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-55098499-2	4.29313282880346	0	1.36778787209631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21818685-1	8.1010513917989	0.834837621200609	0.624817540159344	1.33613025810336	0.181506701527329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47759419528723	3.63187423947039
Merged-chr16-45630536-3	6.03692522492188	0.516431477472988	0.808986438620392	0.638368522411434	0.523233816448731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78807244155879	2.28636004977218
Merged-chr13-59856519-5	14.8312767699248	-0.828898433099954	0.579585818060054	-1.43015651396437	0.152672103168056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06561517578777	2.37222857865343
Merged-chr5-101840596-2	3.1971888061435	0	1.41361458261309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-190944469-2	3.23587254586172	0	1.39804980288644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37867065-2	3.09282377882331	0	1.41572833327493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43847993-3	5.00628444895496	0	1.37623618048593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135773321-3	3.78780064077618	0	1.38971940161685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53461548-1	3.70584434790899	0	1.37580867841081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112999059-3	4.60053315850919	0	1.37131544658074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160062697-2	4.67998180677184	0.369771712919446	1.12280653045105	0.32932807468701	0.741907726048666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11145969726662	1.02748994520012
Merged-chr1-134075778-2	4.25404050295371	0	1.48013730608013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141568533-2	2.92697656426853	0	1.43548561343633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11823241-4	8.34495531543822	1.81225605118093	0.771694072252817	2.34841255925471	0.0188536254218768	0.308397164118501	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15961505864417	4.0963244130729
Merged-chr9-124013462-4	4.51205185976849	0	1.38066762111321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154076198-1	2.47208306356359	0	1.44647791492495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157381471-2	4.70451747681919	2.72368122288811	1.28626796566451	2.11750684584686	0.0342168549115006	0.461766141046242	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.58309189503961
Merged-chr19-24992356-3	10.2842120146634	-1.80236646948311	0.560584816585431	-3.21515391811979	0.00130374596081869	0.0444606817340922	C57BL6J_F1_Control-BALBCJ_F1_Control	5.08947189191756	2.90684704622512
Merged-chr15-74970542-7	11.8584386568481	-0.4353546454948	0.457008810456098	-0.952617620348092	0.340783846208061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.196382758693	3.71726695211876
Merged-chr14-121919934-4	12.9842229052856	-0.442012891810156	0.48103975152231	-0.918869782406446	0.358163687022395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73263375540945	3.48285622718735
Merged-chr6-52401635-3	5.45975224230603	0	1.38356152297563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5860088-1	1.75520316843967	0	1.43936546077273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122922966-2	3.22599666208033	0	1.40751142990677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8992857-1	3.30150147780828	0	1.39820657392848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120198117-2	3.44744746929888	0	1.40373025606846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56369320-2	4.957608281554	0	1.36867186162197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52129949-2	2.89712936183724	0	1.46520691310505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94435143-1	1.28143103355402	0	1.56137616381306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80776049-2	3.17236594137097	0	1.3843282290468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137072795-2	3.83290103646475	-1.27585150084635	0.961310385943724	-1.32720037097471	0.184442409722048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3022060396979	0.662147012823607
Merged-chr7-139949983-3	4.60310906236725	-0.0360480850627493	1.1586042278866	-0.0311133726212135	0.975179125023681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr11-94129835-2	3.92633312522595	0	1.37225615497991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3833847-1	4.13186044700114	0	1.35988868086854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78792633-2	3.42843730129024	0	1.38643620955683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-31972203-3	4.40075012528721	0	1.3731978250837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108736355-5	8.68564418534429	-1.46263512102755	0.807812149154211	-1.81061292846233	0.0702007895171732	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32131143445014	1.27673210875742
Merged-chr9-104270140-3	5.08655970586657	0	1.41270919043293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26705675-4	8.97737726556214	-2.22393525432617	0.843672995663281	-2.63601569062637	0.00838858524866604	0.178681467685046	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71401670368601	0.97908007631626
Merged-chr18-76034712-2	5.2791141754579	-0.675278353262407	1.01341838879283	-0.666337181888707	0.505195604721631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.10056930386922
Merged-chr2-36276736-3	4.610578276323	0	1.37112276023945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9989565-10	30.7421793930841	0.00296934743797167	0.390244424139172	0.007608942637737	0.993929000726475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.12199365541361	5.08079662058261
Merged-chr16-4960606-3	4.57047408487696	0	1.36887153048375	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134367959-2	4.88203544612083	-1.88108628385389	1.04117733834774	-1.80669153521821	0.0708103882610261	0.736544564768679	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24553328998514	0.67591700901439
Merged-chr18-50099206-2	5.30002424715283	3.03541946955658	0.846739872117337	3.58483115005118	0.000337296351204532	0.0160271786321042	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	3.90263195873537
Merged-chr3-19629266-1	4.47315697492351	0	1.3696042988968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24608144-1	1.88246765399846	0	1.52883826294696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97469041-3	10.5562900756515	-0.869446817287254	0.537196917803613	-1.61848809714337	0.10555744994604	0.943468953980045	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28961364609949	3.36661571677862
Merged-chr2-38944173-3	4.50411693555488	0	1.42244160964104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22744500-4	7.42566577776518	0	1.35381608459472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122070233-4	9.88192647198444	-0.631054837463554	0.612365133381158	-1.03052052290959	0.302765723295541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54022323804313	2.65186312948484
Merged-chr18-83938369-3	4.75433719236069	0	1.3860260722398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-177191804-2	2.95379817476414	0	1.40603983371191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64052205-4	6.50413068744789	0	1.38087426073235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136670642-2	4.15485646267135	0	1.38164548800443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47121251-3	6.63112711356527	0.528032004374675	0.89935788258846	0.587121116740463	0.557122366262237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	1.3626301568499
Merged-chr12-34672895-2	3.40599561827288	0	1.40754185580404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147825802-2	3.14478455100333	0	1.41572391900935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106908468-4	13.7874192574637	0.0365691392836164	0.512983387890693	0.0712871803392755	0.943169197878622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19090291045955	3.27965947032208
Merged-chr8-86870927-2	3.28807804362349	0	1.38710761420914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94373023-1	2.22107422131236	0	1.43221451046378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8061969-2	5.34563543883204	-0.418033776877677	0.748233554470897	-0.558694239759514	0.576370411218556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	2.22590269144367
Merged-chr13-73508968-1	1.33864947260397	0	1.54218155814863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152266558-1	1.82810462781415	0	1.46684404902707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125459329-2	2.858313327826	0	1.42452775797672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76244774-1	1.68177527492507	0	1.6781562577963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35209557-4	3.88755453785956	0	1.39028436960377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44980545-2	6.89621459295966	0	1.3882708323476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72367403-1	1.46454751081218	0	1.54131832868321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29240075-1	2.71738115072401	0	1.4365525910862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96474854-2	3.65185824728547	0	1.38355156198514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146752960-1	1.64736218729976	0	1.6434327421332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24606250-1	1.74461853192502	0	1.5767258450251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74077527-1	1.8351261826434	0	1.47792335094594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67610464-2	4.95643078878503	0.15820923193718	0.927958372157375	0.170491733987339	0.864623434520948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57403368136583	1.66624882212637
Merged-chr11-74532551-1	2.16069707454283	0	1.49178560150753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6002039-1	1.34081263809869	0	1.6596224200726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25578369-1	1.78881420744524	0	1.59695040803329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50866662-1	6.88077630253447	-0.516693381277331	0.598651248528847	-0.863095805023503	0.388084794214937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84579281518448	3.34210457474329
Merged-chr8-126687303-2	3.7723424363143	0.172588869575937	1.16098375489428	0.14865743715049	0.881823948193445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	0.730937814817307
Merged-chr6-38939945-3	3.87316891783804	0	1.39461612702289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-10589871-2	3.2435278494354	0	1.38064633153544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8437324-4	10.3007007574543	0.0506127363204552	0.592367177303798	0.0854414934852107	0.931910406718823	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85168047873376	4.0580451264459
Merged-chr14-100026205-1	2.18917428430125	0	1.45278358333353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105947411-1	5.21627403212779	-0.724703504443962	0.774839774792677	-0.935294660935378	0.349636466050941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50097278683654	2.65209657670461
Merged-chr10-8011240-1	2.62481665163022	0	1.45605114013646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8883262-1	1.79906196981622	0	1.49422624613152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105965820-1	4.88452201577982	-0.0604440020216998	0.826812222636157	-0.073104872384426	0.941722664433475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.388633508238	2.20070712705612
Merged-chr11-32560892-1	8.13378220422843	-0.402863577818099	0.57564140167498	-0.699851637922258	0.48401996254183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30103022501261	3.88224550892564
Merged-chr1-149948575-1	2.57566985592584	0	1.41822277441584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99192798-1	1.29777376040836	0	1.55681764207224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74841049-1	2.20804739258723	0	1.48593145352943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81406057-1	3.4691207578886	0	1.3807067485765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11434451-1	1.33216861941175	0	1.50651045810809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122466254-1	2.09937882831073	0	1.44123528881314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73505863-1	2.74162095027903	0	1.4326356044761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99374538-1	2.18115883539999	0	1.44894697793556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156261765-1	1.58033823630788	-2.64473146122843	1.62707980356423	-1.62544667780583	0.104067416807578	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0
Merged-chr1-106822138-1	2.52228325716603	0	1.46650525745762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62491027-1	2.88932947235844	0	1.38808075790387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-72240224-1	1.55881014264193	0	1.51675332949657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14439301-1	2.12898782324702	1.84536794933599	1.37243604166877	1.34459303990018	0.178756692246566	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr9-114887830-1	2.21154615503131	0	1.43110356113643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113470359-2	3.54286167990808	0	1.40646653806081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64957135-1	5.43956500575361	-0.272175851351873	0.841275449205954	-0.323527628921977	0.746295686784407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95419319797526	2.48200572061293
Merged-chr13-52651565-1	2.11552894859071	0	1.52473781479378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91455563-1	2.3788479040159	0	1.51469154768265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23446828-4	4.9769630563636	0	1.36145309281029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88285064-4	6.05007516636308	0	1.36825612562503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174477351-5	7.7692919596031	0.168949484722728	0.751731110783641	0.224747229826111	0.822175920279807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85111348754977	1.92385917873864
Merged-chr11-77404187-3	4.36037002725024	0	1.37132832277001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99238895-4	4.51421783487128	0	1.38840413640733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21962827-2	5.29839162785506	-1.57810540468683	0.749778801995824	-2.10476129824702	0.0353120916214415	0.471050303914096	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35772346007919	1.74817559941081
Merged-chr18-39138048-4	5.76097844266902	0	1.37147945719888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107607534-2	2.79290358297962	-0.686564301987736	1.45393243186128	-0.472211972814183	0.63677549463741	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr18-82843762-2	3.45341186593405	0	1.4108069235121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57688149-3	4.00179364957334	0	1.39587827879615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92067357-3	5.15456001820138	0	1.35736235324247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131431618-5	7.35216682508115	-2.45441773678683	1.15802581154269	-2.11948448153943	0.0340495438718867	0.45984495349399	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26309897836414	0.303163067301871
Merged-chr19-5151499-3	8.20656575189137	1.0129259132423	0.645160511888444	1.57003705988975	0.11640648972781	0.998201806407979	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16975473850456	3.75160442637115
Merged-chr10-19171227-3	4.53415336942933	0	1.37815668385426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89335499-2	4.77755129815158	0	1.36652884917724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122454624-2	3.31962002584436	0	1.37229941679187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109028460-2	2.63034518344414	0	1.45542674080732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46628877-4	5.01665861077129	0	1.37664504229557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125617910-3	8.16861924815966	-0.256167560253758	0.558435818321312	-0.458723369542826	0.64643282991749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66971831928825	2.82468957702485
Merged-chr2-90486600-4	7.41790458321656	-0.81115091724974	0.679735860257552	-1.19333253499734	0.232739165346503	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95066592442779	1.68580115571326
Merged-chr17-48192751-4	8.856439880528	0	1.36296731316255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116456009-3	7.28273574866594	0	1.36352908566742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49236502-1	2.6374173030223	0	1.41960406495604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78770794-2	5.63350957967498	1.6226864075927	1.00822467777685	1.60944920647127	0.107518153097901	0.953853405187687	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.92835129883284
Merged-chr13-6471828-4	4.28835538804969	0	1.3863255480395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39524742-3	8.07890858938598	1.10547517310646	0.681349457193167	1.62247898113911	0.104700830030661	0.938406004886516	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68623598131437	3.17959227217268
Merged-chr1-74437572-2	3.29662508315501	0	1.43408546248837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101214292-3	5.06502105335618	0	1.36662707904976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13467216-2	10.5573649252641	-1.02365526401453	0.589478834858965	-1.73654286376447	0.0824678921808474	0.809328786975751	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85290465971105	2.83668350350332
Merged-chr11-88234171-2	3.58838918160014	0	1.37214315509114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5494478-2	3.52825892608305	0	1.39991280370101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57868828-1	2.68809542865744	-0.783506579076599	1.09937862891805	-0.712681289655125	0.476042996972991	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.02674429890598
Merged-chr17-67317108-2	3.44858953320876	-1.12774188086076	1.32842984065577	-0.848928446461323	0.395921108901839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0.303163067301871
Merged-chr3-61306714-2	2.77278359883741	0	1.40816363426952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98002821-2	3.28906999190388	0	1.42884257685358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118637602-1	2.69548267004599	0	1.45413188715936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90708892-2	2.13035229584593	0	1.58956428695025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106458200-1	2.79378505897853	-2.46545337037117	1.24648432926322	-1.97792568465619	0.0479370909309377	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84016081186083	0.413263464506793
Merged-chr10-21383114-1	1.93865115913247	0	1.5559894319989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11084899-2	3.92489142151494	0	1.39504166716248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82902832-2	3.62168169583847	0	1.36959453834711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45458242-1	2.1606563129222	0	1.43587675955197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33909196-1	2.10943139876347	0	1.47934285879954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36598524-2	2.04476460154311	0	1.49726788784935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8431190-2	4.77501493604588	-0.596276783645571	0.963524160559567	-0.618849851465357	0.53601527771945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96491903277391	1.30064958020929
Merged-chr12-42187319-1	1.98133855193823	0	1.56821344190814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97523720-2	4.30670214158009	-2.53416412970366	1.17260156696264	-2.16114680476493	0.0306840010388381	0.429398697589165	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30806904914164	0.303163067301871
Merged-chr2-93943227-1	2.54271426169021	0	1.51968051991786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6513146-4	5.38264676925209	0	1.37647680604078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123361474-3	4.49851765594848	0	1.3789449424029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87543471-3	4.01670046176916	0	1.38483400810935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117378830-4	12.4825588143092	-0.243244984317079	0.584384443027163	-0.41624137538133	0.677233386179261	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41371418376334	4.18170872491757
Merged-chr14-64809929-2	3.20514585070262	0	1.42803737118912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91380662-2	4.01152661748795	0	1.36301434082506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102816470-5	14.684264852711	0.232596463091501	0.473779232270596	0.490938494658742	0.623469949566786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44236899879702	4.34557803516826
Merged-chr14-25749379-2	3.41674533534448	0	1.41144613044969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8767682-3	5.84287377207324	0	1.36009744826763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90857088-4	10.5769530847072	1.23615674946084	0.600668484535358	2.05796838237161	0.0395931685903341	0.503566928264383	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16523349939429	3.76869503609561
Merged-chr8-68203663-5	7.86525385493264	0	1.38260804554049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70897868-2	4.65453795924319	0	1.35908763696639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132631022-2	3.36835711714324	0	1.42585254703215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58306626-3	3.41992702689947	0	1.37904668444346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145243255-3	5.00865378047861	1.28196990780429	0.970250101023008	1.32127778853371	0.186408757211412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.23659438538296
Merged-chr12-4159391-1	3.50875049953314	0	1.46328324698272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11110398-2	3.20576466587693	0	1.42300688631974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90527176-2	3.73938861064847	0	1.39660080694723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-52223105-2	3.87980436725199	0	1.39951189812918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59692648-3	4.76329378599646	0	1.36326398881821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112930300-3	3.89172018521774	0	1.37742308537344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80867236-3	4.28460756262486	0	1.37185470410586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5600444-2	6.27348445282152	-0.0877578139399129	0.947063881227561	-0.0926630353869723	0.92617126410564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	1.18909650862134
Merged-chr8-26681338-5	8.29276936315228	0.789643786457805	0.739635715888085	1.06761175737664	0.285695677851499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	2.73906126224684
Merged-chr6-26297566-2	3.46144219092235	0	1.39854416013726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87212510-2	3.14521398024131	0	1.39993992949595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125430985-2	4.25699073560182	0	1.37804839402339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113899312-4	6.24663366846724	0	1.36018534024981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113819600-1	5.12082655593004	-0.221487359301796	0.933518737025537	-0.237260753873585	0.812454506756106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34988471442079	2.31150495424159
Merged-chr14-122876373-4	4.30249989216658	0	1.38457978456796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166655891-2	2.99333065150145	0	1.4539322113152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51235066-1	3.25883986514198	1.77803362474405	1.31033241112908	1.35693325574688	0.174802418922392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr17-86788505-1	1.90806326698553	0	1.48949901573898	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32135219-3	8.58049885984472	0.850549992009653	0.579403950516705	1.46797409864248	0.142111258704324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2618610394913	4.105065751047
Merged-chr9-90239315-1	2.12690263925631	0	1.4929396073972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67384477-2	2.05882453568919	0	1.48247355215555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-158948174-1	3.45789466913665	-0.251078080793918	1.24513386544315	-0.201647459572195	0.840192339890119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	1.17858215524007
Merged-chr2-18687947-2	2.75101769445097	0	1.46280140176399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156633359-1	2.6102066117676	0.452290959971811	1.3089979139421	0.34552458422926	0.729700031466924	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0.879366456215217
Merged-chr4-135203906-1	2.73970128381362	0	1.40218678620123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101278779-1	2.51168036559158	0	1.54422651593281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11092295-2	3.53331018976554	0	1.45690604706931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32172256-2	3.14175884359647	0	1.39934572188664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25301824-1	1.88117416666749	0	1.4946026498459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87007939-1	1.93876261712969	0	1.46230872797784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110558517-4	7.7953029188005	1.9104435925648	0.778871623342128	2.45283501839124	0.0141735328149329	0.256819690095646	C57BL6J_F1_Control-BALBCJ_F1_Control	1.578845274708	3.79996773538594
Merged-chr5-92262758-1	2.63686634296239	1.15287869245425	1.49852997933651	0.769339758531028	0.441691640541406	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr7-80780319-1	5.57848560237706	-0.461743774682376	0.73371202838491	-0.629325616616636	0.529135904028872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06813872837081	3.38903069368736
Merged-chr4-55638558-3	7.62983407555187	-0.613471321364895	0.619964745218781	-0.989526140149156	0.322405786899364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77350744446272	2.67796938213669
Merged-chr6-97972029-1	2.20775411680242	0	1.4625907918545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142399059-2	4.09461563946271	0	1.39577233718637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90511497-1	3.26323128304684	0.314879370128871	1.21354955093107	0.259469726544982	0.795272837081126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	1.35418021299255
Merged-chr2-150919512-1	1.56328204885965	0	2.42947428104876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35480280-1	1.98587035708483	0	1.49566045646713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-69835473-2	3.2725901688924	0	1.38707834828265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136666481-1	3.01053978709267	-0.258279722991351	0.954698498522903	-0.270535381998566	0.786748400462887	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	1.30064958020929
Merged-chr10-78295236-1	3.47044050041513	0	1.38932703652823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135242556-2	3.18899410064519	0	1.40590327735189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26446938-1	2.80015728694514	3.8776771172749	1.41308886114969	2.74411413456335	0.00606744384621328	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	3.56033375778338
Merged-chr4-9648233-1	4.69902813125719	-0.923803042118776	0.745557199830057	-1.23907735359453	0.215316852826818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3192152751395	2.01605390242743
Merged-chr10-20763438-1	1.9905598309916	0	1.44243530606156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67958645-1	1.09655281640384	0	1.9616528498591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42962359-1	2.79792510557658	0	1.48783888554092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20182411-2	3.83145871806112	1.55454279662191	0.967579346812273	1.60663081714529	0.108135378126908	0.956882796614132	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.12788580237946
Merged-chr4-77221592-1	3.95575315763664	1.80238733442463	0.976228048544986	1.84627694022005	0.0648520042375536	0.699462321101027	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33904733505278	3.90495409991542
Merged-chr8-119123075-1	1.80620224588649	-2.08883779551352	1.3511860774664	-1.54592903993674	0.122121706241228	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr2-88860506-1	1.95136909804303	3.32529190539198	1.52565846260795	2.17957818665899	0.0292887431914095	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.2059517235281
Merged-chr3-96489711-1	0.800601695168379	0	2.08042431874424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56324375-1	4.41724880275487	-0.288917973089132	0.808312299540294	-0.357433597451685	0.720767228573716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31776252764976	2.03349900099443
Merged-chr3-146146286-1	1.43625776572227	0	1.75869228059947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103341571-1	2.20691751058371	0	1.54368115186208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43058360-1	1.50232962098012	0	1.59067658971032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34617011-4	3.90414910926767	0	1.37328574240801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-101075151-4	7.54394028117181	-3.20054655970326	1.12354725254055	-2.84860877232018	0.00439108403197634	0.112115987268296	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	0
Merged-chr14-87452299-4	9.82153011259606	0.0417002896119466	0.660999396489323	0.0630867287223313	0.949697442193142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50205079112018	4.30608021032518
Merged-chr1-92249056-2	6.22955146286709	0.0990144284362137	0.920809026218656	0.107529819557505	0.914368669876721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69641995825753	2.45069810784924
Merged-chrX-106165272-3	3.97443491973277	0	1.41663901618664	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83067097-6	10.3178165006004	0.878024290625176	0.618770630597525	1.4189818443343	0.155904309267357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35950768455674	3.67972879474148
Merged-chr5-117314009-2	4.44510278007278	-2.74107118478229	1.24802751666578	-2.1963227157886	0.0280688529525565	0.406012447484838	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64538595732494	0
Merged-chr6-129113466-3	7.17188705138618	1.30771743914235	0.745399828605839	1.75438387420647	0.0793647525942859	0.790578813683853	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7751319800955	3.82222059347331
Merged-chr15-80258898-4	15.7261141427113	-0.549329465989049	0.582056447454192	-0.9437735264195	0.345285391694631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.38879992462358	4.87272869314393
Merged-chr15-31627410-3	6.12558660985939	0	1.37303223607027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134263099-3	6.59748295987186	0	1.39092606720301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99090722-2	3.79995852638167	-0.164255152257167	0.996389755203526	-0.164850302202892	0.869061810189945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36759862365701	1.33175291456033
Merged-chr8-122923662-4	8.41807198586564	0.426603214636779	0.682171873982498	0.625360310073007	0.531734605322293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30039026721351	2.55533259242382
Merged-chr11-97793348-2	4.8494131115129	0.288307402008764	1.01548876179249	0.283909987836654	0.776479362134698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.28067447403188
Merged-chr2-103672793-4	6.1198276061225	0	1.35316472060829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117385026-2	3.36038080172873	0	1.43697086818078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118740137-2	3.02434708144377	0	1.44170337877893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91095567-4	5.59181459438748	0	1.36662315090836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33109244-4	5.86076448178373	0	1.36131573319266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66805632-3	4.11529022106003	0	1.37993987694889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15033839-3	6.26636832045415	0	1.36258360168332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32485519-3	4.62844249140557	0	1.39784511337223	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111944991-3	4.49700545544589	0	1.3637211412823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17656060-1	4.5482178251651	0	1.37275880612212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69119036-5	12.6706440698155	-0.0345661869410505	0.488417104043843	-0.0707718600656288	0.943579328065358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59608053572817	4.4747283547165
Merged-chr3-55787618-1	2.09338608484055	0	1.408460958223	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120578880-1	3.14640564763674	0	1.39843683440415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122019405-2	5.00591234936183	0.452004146416219	0.841395017634882	0.537208014003671	0.591123936196361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	1.87043941656813
Merged-chr5-147437666-4	10.4406274957677	-2.23388872372791	0.691549257847185	-3.23026696707343	0.00123674677356327	0.0425765154300987	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07148516135709	1.75191520103598
Merged-chr8-94397516-5	9.58634937044956	-0.704978542955088	0.878465196810444	-0.802511636789646	0.422257059766106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0295486026821	1.11816745933907
Merged-chr2-29664268-3	4.63252508250634	0	1.36430509302214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164586322-3	5.93106325736976	0	1.37888748871197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68623637-2	3.92905543450744	0	1.38835972239623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57103235-1	1.65268124756274	0	1.47358075203002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34586578-3	3.61989895932934	0	1.38578745769855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74134083-2	3.17988575338444	0	1.45629549611846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81372390-2	2.9357723071395	0	1.4631193906936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67051053-1	1.79076631939009	0	1.5130031951118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4674253-1	1.58226200248345	0	1.54416630042096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96776872-2	2.92815387856161	0	1.42886932971321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-63936876-4	6.61238436382989	-0.0331750725553603	1.15380069488816	-0.0287528623464523	0.977061695718019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr7-16931018-3	4.14556441094152	0	1.38972478888644	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35104866-4	10.057613201592	0.859637167666897	0.543349365490541	1.58210761301029	0.113625005968917	0.984152597110316	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74700001162876	4.02726834429777
Merged-chr10-96132346-2	3.44735646444766	0	1.39052136052288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63985856-2	4.13010040954298	0	1.39553723565871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35215667-2	5.22625575267137	-0.736525270016182	1.12098883261035	-0.657031763912492	0.511160492588357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.662147012823607
Merged-chr10-88228803-2	4.1986123773597	0	1.37894755306018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61907344-3	3.55026780868318	0	1.39199972396681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27227619-1	2.44997261802123	0	1.46152328756761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103874528-3	3.96228134270143	0	1.40273229186015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70817361-3	8.23290679014021	0.11602542458111	0.805852059948179	0.143978566721752	0.885517394554275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72597142609953	2.03286621529941
Merged-chr6-125448646-1	7.30118392223202	1.20720235361985	0.739543066585657	1.63236247916338	0.102603148418629	0.926917048018961	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14003775127292	2.94630086462153
Merged-chr15-76472688-5	13.0664977934839	-1.32638854849556	0.509932846062268	-2.60110435861901	0.00929241814537133	0.190901949344006	C57BL6J_F1_Control-BALBCJ_F1_Control	4.99110768757042	3.37415625820271
Merged-chr5-3195616-4	3.48847011703252	0	1.40587338156955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75639766-1	2.81118337165874	0	1.44641230677994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6055032-2	8.4277166314912	-1.42243687465316	0.544129831785747	-2.61414977007409	0.00894498159583503	0.186513331249711	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17438177026974	2.96227705878657
Merged-chr4-141471942-2	6.86407001637363	1.67009029806322	0.911293827234436	1.83265841175678	0.0668533856615664	0.712286003758739	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	2.55209467550612
Merged-chr3-104012156-2	5.64838009996256	-0.693349921787357	1.39242213711576	-0.497945201606425	0.618522666467868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr16-88372231-8	12.8489499530554	-0.178783508630981	0.559307706043116	-0.319651431044648	0.749232581834397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8032867911207	3.51087379605623
Merged-chr7-105726574-3	4.64016634761413	0	1.37382241055703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32698420-4	4.35825684757205	0	1.38038762434998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109480766-4	8.61155909358178	4.01782879599054	1.04978821697517	3.82727556951192	0.000129569430958245	0.00728362429933739	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.51125069396247
Merged-chr18-21700120-1	3.28362297859318	-2.88034797820859	1.34116526506001	-2.14764582206781	0.0317419023395629	0.43848136549009	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12164305972745	0.376242425970964
Merged-chr2-30246709-2	2.72448314718799	0	1.42266396350377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-42762079-2	3.95477928661	0	1.36534786276537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39539851-2	3.56647891937761	0	1.39087728578201	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90965007-2	2.80900457296985	0	1.43006103509503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55792627-4	3.20923075564719	0	1.41114950356524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-85374238-3	6.86014751490357	2.81970530303598	0.784122129918508	3.59600270856917	0.000323144435108967	0.0154628594613454	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	4.04653546296065
Merged-chr12-8320246-3	3.85616949075939	0	1.38243834267858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122548820-3	3.65776625640023	0	1.39244628844066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61868246-3	4.82184953545752	0	1.3750945452264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61817887-2	3.28086789876693	0	1.40557059965485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88091818-1	2.9685608990027	0.954253644708716	1.45459801226227	0.656025676279185	0.511807603756526	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr18-67209934-1	2.08401098697333	-1.02581507881819	1.25260331372618	-0.818946483357645	0.412816947645957	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0.724326877898254
Merged-chr6-34035504-1	1.5181946296	0	1.63413442181621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24828630-1	1.60005629610745	0	1.86989045855035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12729193-2	3.16692935658458	0	1.4196519324123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72373068-1	1.06627126504801	0	1.53961557100492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159697101-1	1.0458848668024	0	1.78919672876911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83414721-4	9.15535413223517	0.339130410365183	0.667174998121793	0.508308032105355	0.611237338028873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83209945520084	3.70874005954337
Merged-chr9-66916681-3	4.84978471142192	0	1.40492591874939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93518513-1	1.92346517270733	0	1.44384347513683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127532609-1	3.99952935804126	2.24437827709605	1.13307343252203	1.98078801662523	0.0476150512348543	0.571117954562101	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.31110203264429
Merged-chr12-8520729-3	23.6930005055894	0.279472272157755	0.420824370118281	0.664106672527553	0.506622039826434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4219347674513	4.77621447388436
Merged-chr2-6791785-3	3.32001111487673	0	1.37827519261432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-111122705-1	1.70212477166976	1.21404685394779	1.52409625730014	0.796568358548701	0.425701760000708	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.41398715281163
Merged-chr7-56013674-1	2.08189136884753	0	1.54581483557624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128703691-1	1.14321052691149	0	1.77391224790972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83282340-1	4.91833482154186	-3.01476242667801	1.13111945845062	-2.66529092409704	0.00769217459869031	0.167542425835445	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51204335593952	0.838451940269823
Merged-chr16-57535816-2	3.21359966911954	0	1.4368083194309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45592448-1	2.50664789005186	0	1.49072184558008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127542586-1	4.1925906959667	0.854172836157459	1.11039678984489	0.769250095073474	0.441744856834251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.897114879832661
Merged-chr2-45274207-1	1.30715025745314	0	1.86124864802796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91112638-4	10.7625711726971	0.100321030607805	0.628211179427393	0.159693163530211	0.873122786501835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63197117363898	3.73052009044781
Merged-chr2-4381106-1	1.48700077143656	0	1.66283898857395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59043190-1	3.11732690439745	0.163452676463024	0.873026892575096	0.187225247988525	0.851484029809428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16022678139939	2.08893859198756
Merged-chr8-106970978-2	2.3201652101013	0	1.61195249537929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123024662-2	3.34504706933914	0	1.39129828968034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-86329484-1	3.49556741796733	-2.54628362034692	1.24485846632659	-2.04544025624107	0.0408114735757702	0.514368396036469	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46769659198498	1.40024388691264
Merged-chr1-154103147-1	2.13758527414455	0	1.46242084882031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95046614-1	1.18952248208395	0	1.72357242302881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29734482-1	2.01630647295407	0	1.43761142821023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73034199-1	3.44703461610585	0	1.41907209019115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70850871-1	1.77736829585762	0	1.52701034297561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66711395-2	7.86909234000806	0.858685912198402	0.86669251905835	0.990761883039389	0.321801865737302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	2.01543309124045
Merged-chr1-173936865-1	3.54466122905041	-0.888529990521028	1.06440765746372	-0.834764748534618	0.403850177476198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18907334447161	0.897114879832661
Merged-chr12-59052629-1	2.64588935543946	1.27467302079825	1.1733287102976	1.08637333222242	0.277313855050721	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.34503387201423
Merged-chr16-25008246-1	1.60064684068239	0	1.61959629979675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104133952-1	3.32542152759879	0.203673652775538	1.34940028564068	0.150936423345157	0.880025867942929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.788686275880602
Merged-chr17-35434916-1	2.23783467018123	0	1.52151033384434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108956693-1	2.62924309942244	-0.426817212147563	1.12429060760638	-0.379632462692415	0.704218259993452	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57272540080272	1.27992882773773
Merged-chr13-63038045-1	1.18748963045147	0	1.75223397902163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105408617-1	2.81564115511475	1.82944196817406	1.42884893279923	1.28036066387371	0.200418321555007	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	1.42614485211135
Merged-chr11-100695119-1	3.22504118124741	-0.704888031581866	0.901603708235041	-0.781815807924902	0.434322829478953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	1.18984215491549
Merged-chr5-17982972-1	1.05192022471894	0	1.72176427316856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19938522-1	1.70441727120805	0	1.46167663050452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119596477-3	4.4494867010485	0	1.39711335381484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44825084-6	10.81879096573	-0.131460914648015	0.578611261496138	-0.227200753590747	0.820267641736574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76139440711178	3.06173655638566
Merged-chr3-123103411-3	5.45491705652122	-1.79676935537125	0.933872797760676	-1.92399795740887	0.0543548394986683	0.62476051129814	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57270279668386	0.724326877898254
Merged-chr2-16359545-2	2.93876200967142	0	1.42288981028628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103957083-2	3.58869171009119	0	1.41119785056399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145861755-2	7.33257300521652	0.547914029727045	0.714973691179571	0.766341526249855	0.443473115666319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86542081238282	2.94955427311632
Merged-chr5-24043170-2	5.80183377361733	-0.845464827415513	0.883889047130174	-0.95652823186415	0.338805428050891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61823775429303	1.55227291912954
Merged-chr17-84112246-4	4.6266386600089	0	1.36550219544961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59245033-3	4.59373329268139	0	1.42043377903341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170632566-4	4.63226672235819	0	1.36304556688068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66121210-4	4.21289502876582	0	1.35846261121642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91208725-3	3.63155234666514	0	1.4412613553461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129614876-2	6.33689378159956	0.0289700817157881	0.937842221898903	0.0308901444606862	0.975357149754985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.25298535761957
Merged-chr3-75297651-2	3.84971522837977	0	1.39536058082681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113469696-4	8.72745756031666	-0.25436521413972	0.592151197767605	-0.429561259182909	0.667514823292376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45912896501731	3.46398433787822
Merged-chr9-89204424-2	5.05251554943287	2.566035096539	1.14092526400151	2.24908254510841	0.0245072448519808	0.369334439398067	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.54671377011021
Merged-chr8-46151688-3	8.8295714502574	0	1.3647413697984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43653938-1	2.94074902296819	0	1.39686737347657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105216631-2	3.40259187455909	-0.0773486862967227	1.20915477295346	-0.0639692188517703	0.948994736389459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.67591700901439
Merged-chr2-24316954-4	4.57106004422278	0	1.36494342489796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59680157-2	4.99583272138505	0	1.40212503880006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86191992-3	8.67337517858533	0.140717911041466	0.718358508199615	0.195888138631698	0.844697721413679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	1.6794096906117
Merged-chr15-97449158-3	4.34213302751367	0	1.36885943118561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122811894-3	7.46666199010859	-0.762915639339204	0.737023549781908	-1.03513061362145	0.300607917406712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43926325819881	2.32700461269991
Merged-chr17-17589129-2	4.0371210138653	0	1.38592163565874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114439941-2	3.21182131789897	0	1.40796922913984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104431857-1	3.0280598281085	-0.589655015414371	1.41409737060366	-0.416983319304707	0.67669060873658	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.716426531808663
Merged-chr17-10444748-1	1.45831937179342	0	1.46265325573085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36162551-2	3.2391203438309	0	1.42044262787585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170286190-2	2.56310707580187	0	1.44654971321698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10771438-2	2.3061584661168	0	1.59273985289713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4826807-2	2.19927411340616	0	1.68820994381777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-43218949-3	4.26176865409059	0	1.39691065202951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-110470085-2	4.82827889638618	-0.260481992371649	1.17025068688162	-0.222586489622799	0.823857352395654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18637731361239	2.32808951121551
Merged-chr14-120326614-3	5.34828651112608	0	1.35667481648841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32170289-2	6.5828007937919	-0.183469742488169	0.869325535863619	-0.211048375918124	0.83284952287646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91160626283417	2.00425570563599
Merged-chr15-82882087-1	3.05487422486212	0	1.41365958407214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35479684-2	5.40010156438929	-3.41872850477682	1.02605853163428	-3.331903979524	0.000862540109493467	0.0320689706942348	C57BL6J_F1_Control-BALBCJ_F1_Control	3.479270142157	0.716426531808663
Merged-chr12-77000277-1	2.85566628448397	0	1.41265204320915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86906304-2	3.3831853592528	0	1.38408295483775	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58225838-3	5.25940488682478	2.45332075159804	1.18308198507829	2.07366926598557	0.0381100374403043	0.492774387539844	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18909650862134
Merged-chr4-11481253-3	4.06675727216608	0	1.37577950921788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148958924-4	7.15045698031402	-0.810965512778104	0.874107460273072	-0.927764090383987	0.353529954990838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80363332130919	1.338064021838
Merged-chr16-38789181-2	2.96964373189035	0	1.42843641590113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75684246-2	3.40379669398727	0	1.44716472422224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27631719-3	3.63710702678084	0	1.40949413057951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101856727-1	3.23091273922547	2.6723914088172	1.30248859431469	2.05175801191818	0.0401931857618058	0.508796342408265	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr6-145245431-2	5.7961615775251	-0.202381362066259	0.763797736677175	-0.264967218869617	0.791034715031735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54521574930737	2.06611709152988
Merged-chr17-24360037-3	8.8202227646284	-0.438168340454217	0.78314843972682	-0.559495899151711	0.575823329163588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64660126549176	1.79394765676419
Merged-chr3-79861146-3	3.53762348257742	0	1.42264159762639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79757798-2	7.71654226323851	0.940525725301417	0.655733934158513	1.43430997895262	0.151483823873542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42002161374056	3.39376694884864
Merged-chr18-62183866-3	7.82106687277161	1.19995504589884	0.638449924580555	1.87948185080792	0.060178729392615	0.667875776041887	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21307952544685	3.39018740758156
Merged-chr19-11497455-4	4.36974999300458	0	1.41938402914965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129213742-2	3.3726146835624	0	1.43190915651036	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118587836-2	3.04749750924242	0	1.38804007489803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85577953-2	4.12028863409094	0	1.3824152666392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36127797-4	3.9559086242494	0	1.42634344934453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73574677-4	4.79890817303212	0	1.39579367658021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34621100-2	7.28565121768104	0.194654408193963	0.597344268093407	0.32586636984943	0.744525461014373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45468391198349	2.95795914374106
Merged-chr16-38130712-5	12.2293286510907	-0.521796485417239	0.499198672207149	-1.04526817571484	0.295899041809861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33579404716024	3.82115212690936
Merged-chr2-118487159-5	15.5416781910289	0.489981271481944	0.482047866096403	1.01645771290263	0.30941147478269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10198491879375	4.63979141735374
Merged-chr2-118295664-4	8.62964318969884	1.48110803280059	0.618367373837771	2.39519110396849	0.0166117046653319	0.285306683697559	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35204052049844	4.21970988168284
Merged-chr15-50751245-3	6.01590296528983	1.25842176222071	1.13145542358979	1.11221506034068	0.266045694074689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.39020008251549
Merged-chr9-94512087-2	4.70761046870439	-0.326538005873759	1.02687514669246	-0.317991926209851	0.750491061249125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77128661274154	0.897114879832661
Merged-chr6-37448084-2	4.30052606711173	0	1.39192383098518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55711138-3	8.88504755529053	-0.731261065199078	0.72184888107455	-1.01303899524027	0.311041535198451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84822737271812	2.7526842446486
Merged-chr11-84290866-4	8.85825793921917	0	1.36156194194805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36117166-4	6.18799510696177	0.506777756801274	0.915774819984051	0.553386865135798	0.579998531119274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	1.79065725465852
Merged-chr12-71808234-3	4.13450311979329	0	1.37069048042214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82067189-1	1.51574597036953	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87327120-1	6.18230731726566	0.42323576498112	0.70217478900414	0.602749873121157	0.54667509808535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32972687237742	2.77463793101218
Merged-chr16-22043985-1	1.44995622151645	0	1.61399287798856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166001596-1	2.50420723614493	0	1.46621520770765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99175344-1	2.73097916293432	0.258791780643327	1.18117854275189	0.219096242673354	0.826575077584872	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41564793337539	2.46921564202169
Merged-chr2-75650592-1	1.75255881994923	-0.0354209240220766	1.5073103781885	-0.0234994229022996	0.981251898816085	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.600815099743027
Merged-chr10-44527331-3	6.36866776808824	0	1.36095581654189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122105607-1	2.79334397543485	0	1.41427767772397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118702267-1	8.45552410341271	-0.0641401100859007	0.811890330143854	-0.0790009533363159	0.937031864782366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7590793604206	3.44638721926532
Merged-chr5-4912097-2	3.69011595987188	0	1.37665647083692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41193751-2	6.50537777543855	-0.501704279882969	0.863641949908491	-0.580916987573528	0.561296402661019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50075654150023	3.46397602840705
Merged-chr5-18013842-1	3.65338591739482	0	1.39979206237611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12240564-1	2.51571669674144	0	1.42028179496557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55937952-1	3.09647283282453	0	1.43333522248805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76053321-1	1.82477793257986	0	1.45710657230454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112813164-1	2.50577446818508	1.83034245966549	1.49667284915694	1.22294091236873	0.221352014482266	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.67656321522231
Merged-chr15-53687353-1	2.30735463363366	0	1.40166455555141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37082413-1	1.33203773152113	0	1.52733668770296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-35897882-2	3.51320983247102	0	1.39915743232539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8438813-2	3.91961525326888	-0.569426943934907	1.08927705567964	-0.522756759601092	0.601143533898575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43282905033915	1.20027794713453
Merged-chr10-21224445-1	2.02741460280435	0	1.48161804513736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104823369-1	1.95064793733758	0	1.53869840009442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103111288-1	1.56850296347661	2.48855600392686	2.38454285185153	1.04361974539253	0.296661353762495	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	2.13446293034417
Merged-chr2-136914545-2	2.9964428394797	0	1.41244481418113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134614936-2	4.9021565898653	-1.19809977786907	0.916865245392218	-1.3067348597738	0.191302775099168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	0.990331813111976
Merged-chr9-109894947-3	3.8206084958975	0	1.38373123822041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-31347329-3	6.29288650410035	0	1.37098717696629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79628195-2	1.99130704575568	0	1.47469498708522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79302598-1	2.82215167972352	0	1.43735844185748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171567016-1	2.5907344859214	0	1.4021902386588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45610470-4	4.64869501728716	0	1.38225158123681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32762661-3	3.4299222949889	0	1.41906467229839	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136121537-1	3.75378811095667	0.555543039557169	0.687961015648769	0.807521105005165	0.419366320226339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10721250591398	3.69048524734344
Merged-chr5-122044751-1	1.02604317332715	0.348251761397982	1.6834388181485	0.20686927118682	0.8361119554357	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.724326877898254
Merged-chr12-25150881-2	6.19118590896188	1.61629295762467	0.769403501044541	2.10070912782486	0.0356665075714654	0.473776344603333	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85297260998396	2.54866830619068
Merged-chr10-78455573-1	2.16555170192641	0	1.43624184023628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91087187-3	6.21373579705882	-0.729567582277969	0.598834407999428	-1.21831272974993	0.22310515442745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82463011700247	2.88387377657952
Merged-chr1-33892979-2	2.91999233426699	0	1.43369585919121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36958121-3	6.6500439233077	1.8835718425916	0.836644897327871	2.25133966466235	0.0243640323940663	0.368094618373832	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	2.65769056724299
Merged-chr6-140763753-2	5.46571167120657	0	1.38715640147163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116619536-4	13.3653441120842	-0.600056394976955	0.519514167152558	-1.15503374675198	0.248076607240588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53962748431946	3.01091647595868
Merged-chr1-161748301-4	10.3291956680347	-0.330639690337506	0.553457426515171	-0.597407631548771	0.550235259791522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89762895552055	3.3550175826973
Merged-chr1-13531688-3	3.95135663824021	0	1.38254393709803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101753822-3	5.94658792344439	-0.0358471226655017	1.36160701003936	-0.0263270697060126	0.978996463888001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr15-74962288-2	5.75994952446513	-2.72666029976307	1.16881091353909	-2.33284979476013	0.0196560301568604	0.316306140703604	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56586581096048	0
Merged-chr2-164360441-3	3.07355113426744	0	1.4514506240571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41973971-3	7.11020298876303	1.20610514388177	0.796231067365369	1.5147677518696	0.129831229790761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	2.54186430548831
Merged-chr12-105972492-1	4.21269195690843	3.34688591633822	1.11156749459285	3.0109605872958	0.00260422652775203	0.0761092203344478	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.91596886038698
Merged-chr6-34754664-3	3.96107101611814	0	1.36398508517905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39345672-4	8.32114645089144	-0.207814253286111	0.767951511313779	-0.270608560858994	0.786692110815311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37870777569119	2.15929528395295
Merged-chr15-67434487-2	3.652895832895	0	1.42119888272125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105025495-2	3.26822103166698	0	1.38253340144384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11060557-2	3.74317309358042	0	1.46979236110222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116615350-1	3.60658024044035	0	1.37820103149402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87331300-2	3.85480587633409	0	1.39769496876297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119782913-4	5.38183638770773	0	1.35507692535291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6300595-3	5.11762810702648	0	1.37773284542772	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78331712-3	3.8302244327144	0	1.36904889540074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64195461-3	3.97990644120591	0	1.39186959825822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103316628-2	3.90847410297066	0	1.44449976150322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86140489-5	12.5287256263508	0.29790625155004	0.511202613554128	0.582755728651016	0.560057751615684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36262901807605	4.60201344592971
Merged-chr7-19590058-2	3.78353537269395	0	1.37688570592616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96373683-3	5.01382565462333	0	1.36932791460659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125177194-2	6.79170442838555	-4.58796475650916	1.12154062061859	-4.09077002844415	4.29943299988701e-05	0.00291412566634486	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76270646759858	0.303163067301871
Merged-chr18-12218697-2	3.29517549858651	0	1.41763155955423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-59178192-3	5.22908256300231	0	1.38063596317228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96504281-2	2.7453146144499	0	1.45637521066991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5236724-2	3.62295307842681	0	1.38129580903166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53265797-2	2.87622432802917	0	1.38998821737753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76337293-3	3.28408659845934	0	1.39703714164931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56378076-3	3.88213919243308	0	1.37126349426923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114883473-2	2.74528780851961	0	1.4199661086393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54815127-1	5.02029722468029	-0.91580847573789	1.02529088220104	-0.893218199475139	0.371740333728948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45063110846411	1.07599819202159
Merged-chr4-58952126-1	2.65809426099463	-3.18694997327301	1.19146207292902	-2.67482284638604	0.00747687476089541	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	0
Merged-chr13-54758567-3	3.85681189092597	0	1.38679701157878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53318692-1	2.61210189466067	0	1.52492868615227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23466416-3	4.85247938654368	0	1.38185154120294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38519591-1	2.41328740747554	0	1.45351237023687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91502184-3	10.8109874383242	1.25514255946383	0.640712699199034	1.95897874512695	0.0501152760190278	0.590491629533913	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59719856194818	3.7517742258943
Merged-chr15-78623618-3	4.2214078003573	0	1.36876819674918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157142184-3	4.56659404704973	0	1.3626801122605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108170660-2	2.9251224522347	0	1.40498156336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99460216-2	3.80312986437578	0	1.38317986444061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101494030-4	6.41526437420365	-0.038501400486237	0.800038926645149	-0.0481244089555582	0.961617093206178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	1.62438888480879
Merged-chr10-19103221-2	5.69287679723183	-0.973896146908785	1.03072343358225	-0.944866600659342	0.344726984821696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64500873683875	1.25298535761957
Merged-chr11-79083728-1	2.54519071150989	0	1.47473352717425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41228863-5	11.9905177857929	0.330517592460319	0.509152737645477	0.649152146345637	0.516240039075483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13476220989799	4.11466486410009
Merged-chr8-61575323-3	6.33959834520939	0.617047193942765	0.938516443859059	0.657470839195471	0.510878215296607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	1.20253745507858
Merged-chr14-105505218-1	2.69302547811164	0	1.42248713359561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8468973-1	2.89771963784789	-1.30404876944783	1.38762363412266	-0.939771230022557	0.34733491915886	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0
Merged-chr2-59670505-3	3.18324003485636	0	1.40145360394914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30614687-1	6.46281148348603	0.888776326160567	0.712109596975263	1.24808924066704	0.211998378026428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98459585107782	3.71035729283893
Merged-chr3-9398458-4	7.89117180353303	1.87253263583167	1.08747808325173	1.72190379251828	0.0850869478625128	0.82328967583808	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	1.62795783074758
Merged-chr7-145090260-4	6.21864099196561	-2.34294256018303	1.03998484555648	-2.25286221255403	0.0242678380870918	0.367098410192741	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28417914267792	0.600815099743027
Merged-chr14-45652863-4	16.0169599536196	2.16477318096456	0.635721698163572	3.40522147854635	0.000661104127283185	0.0265110339564892	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31996877971892	4.20637634555424
Merged-chr2-90488489-2	8.58401832345898	2.40924908713267	1.08890975512281	2.21253329378149	0.0269298383752717	0.394682956117928	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.00101204725338
Merged-chr14-104299306-4	3.5664704982425	0	1.42121082400973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92038221-2	4.58011765490545	0	1.39664391478765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43332678-2	8.56339082972527	0.458219159173171	0.563406362019246	0.813301357710828	0.416045298813766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91649491165338	3.22721527604546
Merged-chr9-64793093-2	3.51215056287852	0	1.44191562153162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94159696-4	4.79518481334568	0	1.41439629214858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71149708-2	3.63213458304556	0	1.37557123770753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126681249-2	4.96056413992342	-2.37617896262827	1.21188823425368	-1.96072450863555	0.0499111684634514	0.589025150580293	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	0.376242425970964
Merged-chr2-44345597-2	3.1127752006627	0	1.40354109235209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54822086-1	3.48187615689138	-1.34694868226294	1.35885258906148	-0.991239736455329	0.321568531628695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr1-95604017-2	3.16643113267835	0	1.41880159363057	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24823480-3	8.81393853562054	-0.917885022470936	1.16962361108707	-0.784769573536428	0.432588682527215	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.465515277017237
Merged-chr17-23982312-4	7.55895237391415	0.663241677160519	0.649383626272494	1.02134031461121	0.307093232411477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62234012822677	3.95165170109459
Merged-chr8-84277136-4	11.963279793744	-0.225656789670354	0.479835063994277	-0.470279907833174	0.638155050388043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66926647231772	4.36038099486961
Merged-chr4-94999369-2	5.05536956484591	-0.262234190672929	0.943137304202057	-0.278044553539097	0.780978157849945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	1.39949824061849
Merged-chr5-64299818-2	9.20453613519858	0.855481265888166	0.553301641274518	1.54613903533267	0.122070993172993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56779666681302	4.41445612065288
Merged-chr3-69404001-2	5.3672104090425	0.900376036667906	1.04552520364845	0.861171049273578	0.389143842500654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.39949824061849
Merged-chr13-81135703-2	3.11510732104779	0	1.41969652061125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140684575-5	15.0910269080573	-0.0453647001854168	0.460564163146428	-0.0984981112631507	0.921536771661739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59798975858165	3.517329286472
Merged-chr9-70651120-2	4.796523563221	0	1.40901098622237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149549421-4	11.3395573398832	-0.114766757637159	0.571212133810073	-0.200917926710776	0.840762750048544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67177396938878	2.91688136005783
Merged-chr12-26206981-2	4.66475306529295	-2.13684547808333	1.34151818114814	-1.592856144711	0.111192466486559	0.970661841294825	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.413263464506793
Merged-chr7-97425018-5	11.439425799781	-0.0932769497946476	0.601024813303606	-0.15519650392126	0.876666404362898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58643281934517	2.64184831682362
Merged-chr11-104448683-1	3.0145153489696	1.55978229894547	1.02937015842916	1.51527833420558	0.129701932651523	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.06239089973625
Merged-chr8-60865793-1	2.64088166257701	0	1.43937145232612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165015083-2	3.26178172229905	0	1.39684406802572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108132958-1	3.88523247719071	0.684237381257451	1.05496591230905	0.648587194405011	0.516605234778221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75385952640166	3.75041375024341
Merged-chr15-67321708-3	12.2577898479607	0.146460413334469	0.527243786595499	0.277784996349011	0.781177409260648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45171100068592	4.27006366701917
Merged-chr2-70842403-1	2.2265045248108	0	1.42701512881581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144586863-2	4.48858687116108	0	1.42252372876012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9711261-1	1.31105589773183	0	1.54703218121834	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21011014-1	2.27025890144997	0	1.43728636867966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76366818-1	1.99900563476653	0.604879333372448	1.55601381343853	0.388736480453067	0.697471093231742	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr3-68744515-1	1.87199567231334	0	1.46895510437784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92245646-2	3.06765592743279	0	1.43555790529352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124710292-1	12.630475515955	-0.370078742213832	0.481040334463464	-0.769329961959645	0.441697454740522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83288744651021	3.25050805193094
Merged-chr6-94574813-1	2.50463658086247	-0.842528574841789	1.29121223741866	-0.652509750469944	0.51407238485973	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.67591700901439
Merged-chr14-61588594-2	2.66447832378054	0	1.55559080495917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37960075-1	1.31920910194055	0	1.57888243544067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34874427-1	1.88519170349764	0	1.46321054947532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58734829-1	2.16741537746722	0	1.4258583213123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-103367262-1	1.14557770653751	0	1.69799657319848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-11338413-2	4.013344136764	0	1.40790553225344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-159189895-1	4.25390044276539	-1.4867675621775	0.942231451615379	-1.57792181488801	0.114583572686813	0.988674353600392	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37705875126183	1.14143228603163
Merged-chr13-107995541-1	2.76298472239837	-1.53636433829305	1.37931711626855	-1.11385867700196	0.265339819537206	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.716426531808663
Merged-chr6-124262899-2	3.54399321714237	0	1.4245436527139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31938708-1	2.15933727276761	0	1.4596228490157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108384705-2	2.82408533253865	0	1.44142730842453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21431192-1	2.92024576023649	0	1.39077586854173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-42608486-1	1.51921215402959	0	1.56752234739158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124627293-1	2.38231085424415	0	1.4247262997138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95841480-1	5.57817108532266	0.348432285113304	1.07108188560471	0.325308727368297	0.744947426301259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07188952960158	2.87196065833407
Merged-chr9-46119209-2	3.43401469327749	0	1.41225479510437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96465690-1	1.62177857110401	0	1.45131558948126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17898496-1	3.13230779474106	0	1.51416249914735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94425934-1	1.15288906320505	0	1.87673755120806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46547774-2	2.8260178288022	0	1.41028012950306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57132454-1	5.04393474273015	-1.70868107771029	1.18440304657211	-1.44265170767294	0.149118609517552	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81534621159246	0.716426531808663
Merged-chr6-54667945-1	4.76896533038248	0	1.367821155563	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49495871-1	1.41976288989741	0	2.4460356372054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-93962506-1	1.71073116197245	0	1.51391539452178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62654093-1	2.77746897947646	0	1.39913862305005	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148580737-2	4.20116920518965	0	1.36239192882744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24785941-1	5.08571824315464	0	1.38256150869784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45024271-1	2.02649275250346	0	1.51781650816663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71251917-1	2.45641068073547	0	1.54551327204509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14464338-1	2.75113536999638	-0.0373275447162159	1.30319462594137	-0.028643108230478	0.977149230779357	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr13-118421057-1	4.40757152215378	1.74337464240479	0.799481278651527	2.18063222861868	0.0292106293708357	0.416870727741995	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	3.32053763889986
Merged-chr15-97878915-1	1.96351472404134	0	1.62365644930473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77468892-2	3.38381402605657	0	1.3877952522849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44392989-2	5.44638342269129	-0.140344170364179	0.797773097516231	-0.175919908556861	0.860356864500264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43716890480691	2.46141716136718
Merged-chr1-4967195-1	1.59919151009556	0	1.60497662226887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5443748-1	1.66311569833644	0	1.61928068959279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95974143-1	6.48586633471723	1.74105124465077	0.597888897881396	2.91199794948551	0.00359124992964582	0.0974135503620844	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45349577151173	4.33291740028927
Merged-chr4-119707989-1	3.12804514841275	0	1.41699394699555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131246837-1	1.43529825086514	0	1.52571016941176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24979250-6	15.5838241473668	-0.012638861984779	0.464981742351314	-0.0271814155989587	0.97831503843339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16029942234968	4.20089758877407
Merged-chr19-16033467-4	8.79073810396804	-0.245196684673349	0.561127244242259	-0.436971626648534	0.662131925177977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54686005535586	3.70670901340958
Merged-chr9-44477835-5	10.6991257354726	2.48640188332064	0.883820509648963	2.81324302409343	0.00490445692962333	0.121458484846193	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.37826647008852
Merged-chr12-3409186-2	2.91568156886386	0	1.41940767848371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65598478-4	4.26266385080465	0	1.38280344517151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71439645-2	3.41560231945852	0	1.41549537617861	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126114188-2	3.47357898150931	0	1.39495854111919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72946141-3	4.33417894163922	0	1.38332017687818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119359800-4	18.3130972734012	-0.648464475790408	0.372974501335196	-1.73862951346271	0.0820999517045807	0.806622292190823	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95700226492672	4.51403079295775
Merged-chr11-100295515-3	4.24188189418807	0	1.45964213219612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8455861-1	3.84111747252558	0.953936007303094	1.27566747288796	0.747793627710438	0.454584646322805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.02674429890598
Merged-chr6-108773137-3	5.01940634526593	0.243206980755007	0.908770429659171	0.267622022919717	0.788990277287862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.62830504494315
Merged-chr6-97334746-3	11.8070269508434	0.662160379476848	0.51476170860772	1.28634350303133	0.19832320631702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94361456547693	4.66761439206903
Merged-chr3-105928374-2	3.31840359913183	0	1.37323247536238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-33263849-2	3.00573796875805	0	1.41559017314084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56069105-2	3.22846362331073	0	1.40042296243088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143844634-2	2.6132811980918	0	1.41187136093794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48655848-4	4.29982084346228	0	1.40153760205473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98387787-3	4.57001473862904	0	1.42086008410863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34533217-2	3.39104397252922	0	1.36859811182073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125574421-5	8.99267781828341	-0.407867069034218	0.586404430712828	-0.695538859654281	0.486717667040447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3575037581034	2.9816199240307
Merged-chr13-44679421-1	1.46138255748149	0	1.7081429993213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84411468-1	2.05173597184462	0	1.42880161840872	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70703328-1	4.10454109258587	0.447876579241131	1.30962058299163	0.341989569389652	0.732358741942217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr3-105865296-1	2.22241914800904	0	1.54182823151468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34238121-1	2.79509742553191	0	1.46069412269619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16149426-2	4.04438508843235	0	1.4196551711025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-75034347-2	4.0353249752442	0	1.38989244489652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122782319-4	8.15322390746412	3.19260755936167	0.992136391460803	3.21791195932339	0.00129127446713664	0.0440630186811555	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	3.41211204759519
Merged-chr1-156046181-1	6.77450945395675	-0.018727353232484	0.782634805024211	-0.0239285974917825	0.980909563310327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19361279780801	2.2887073824997
Merged-chr12-112670862-4	4.75332233626608	0	1.37235778213637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-7405280-3	4.52132745759481	0	1.37867700087673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4796187-2	4.20169475382219	1.74051665535717	1.26747987579611	1.37321048530569	0.169686920977451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr16-85071102-2	9.10589042982624	0.730218405174145	0.75457512752904	0.967721275899121	0.333183589495824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67680357671556	4.33204541641316
Merged-chr1-193060359-2	6.91820313450306	0.173196612257105	0.710192202878755	0.243872872097236	0.807329279865826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19702738253442	3.50837774542869
Merged-chr11-80178455-1	1.87097811041262	0	1.45698835040849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88226342-2	3.8367087739205	0	1.37976680768697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-38478757-1	1.29290552770072	0	1.54948913629495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68579917-1	3.14603690873748	0	1.42479548358396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47901881-2	8.87174556514415	-0.429636672744539	0.704881321128384	-0.609516325467059	0.542182255035328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73279563801136	2.74814865268467
Merged-chr7-111014384-1	3.21565458959261	0	1.4194966549116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65001639-1	2.66881935974331	0	1.45695310040629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156241909-1	5.32563061427325	0.788581787128638	0.654897100352371	1.20413082712435	0.228539016627628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70275322934241	3.41480682830547
Merged-chr1-64573378-1	1.81488783992698	0	1.47177094381611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64836780-3	8.21154743743371	0.921730967736353	0.57598422650207	1.60027119724092	0.109538433602113	0.96349509905781	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79420875551841	4.23991470713473
Merged-chr2-22806478-1	4.02485366892692	0	1.37647667365214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122419004-2	6.00016080456059	1.71529561268062	1.05772914113381	1.6216775599488	0.104872406040178	0.939479090299608	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.60650301571838
Merged-chr1-86600011-2	4.12898348420317	0	1.39487687284832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-93235575-2	8.75100266415799	-1.24638748069599	0.781421297501405	-1.59502624855671	0.110706366186631	0.968307815001739	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18726813820844	2.95113190241318
Merged-chr8-90861730-2	6.70011550304177	-1.55163890929916	0.845123671848511	-1.83599035382042	0.0663590833059529	0.709202482401048	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	1.02748994520012
Merged-chr5-148473193-3	6.16602934420347	0	1.37787667844367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128731146-3	4.86232162830192	0	1.36119031334024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169807934-2	3.49209492589869	0	1.4523500783081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89039082-2	6.03847251551627	0.625713003890674	1.02518350130321	0.610342444152944	0.541634986200532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.79957942362569
Merged-chr18-75610731-4	12.3404631973346	1.17554179247804	0.632547294981482	1.85842513564533	0.0631086655735603	0.688229886433895	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11032358187291	5.19559697446913
Merged-chr6-31340143-2	3.2551659639104	0	1.38816424282988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108726292-2	3.87378400432804	0	1.382405640713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-86679064-3	8.08807502269288	-0.622856855443492	0.659347378402177	-0.944656604160443	0.344834218703804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91460186843461	3.62093208837299
Merged-chr3-58376940-3	4.39541048774833	0	1.4147625462494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99168614-1	2.19460742385102	3.13941163922692	1.48106932725047	2.11969256365269	0.0340319805335895	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.41478649953382
Merged-chr17-45708395-3	4.08406050656458	-0.0357036999274787	1.38819985799828	-0.0257194234113825	0.979481131339007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr9-114748568-3	4.28258416332714	0	1.39973521473494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71959708-1	2.42386384230907	0	1.38801391002004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34097540-2	8.1163399636074	-1.1355512481763	0.617577731738325	-1.83871792944997	0.065956684879329	0.706781051006719	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78846936301897	2.52158721809468
Merged-chr13-17028792-3	5.69112216835931	1.95407862866297	1.07683505972684	1.81464989555472	0.0695777294994242	0.729305013085075	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	1.52633957112176
Merged-chr11-31719588-3	8.51449549250864	1.57115887804035	0.930164301325236	1.68911973487035	0.0911964866325586	0.858158689834558	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	2.24626323229054
Merged-chr6-146907259-1	3.47605313611596	2.63292550189072	1.20580635319185	2.18353925149025	0.0289961216672987	0.415226601083427	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.97656658922368
Merged-chr3-60511509-4	7.85245353669987	1.44270531581149	0.822104022670698	1.75489387720631	0.0792774616710305	0.790288563905291	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	2.44624272831838
Merged-chr15-19856083-3	6.06543052248723	2.78051183936627	0.822248747795803	3.38159449536405	0.000720664413886998	0.0280620321450454	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53908684775483	4.06581636581987
Merged-chr15-59391974-3	7.545315731958	0	1.36287628263837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21908173-3	4.96025679461386	0	1.3686835661055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115323466-2	3.75904252667816	0	1.38492379933665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45236006-2	4.27269107843767	0	1.37205832666735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44762092-4	5.53455906349386	0	1.36285617981725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20309669-4	7.30536149737099	0	1.36012334658624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28242191-1	2.22136626109541	0	1.42801746299996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67986700-1	2.97556015541815	0	1.44780996891368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-90593038-1	2.6320737394675	0	1.42721345777549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88242269-1	1.77446084225052	0	1.55896717150427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102516926-2	2.88273737072378	0	1.41546653247143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54737902-1	3.19782480973727	0	1.37754300231485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52906682-2	3.66634482612763	0	1.40779733029855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111556203-1	1.21793168272662	0	1.84074618402265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133153827-3	9.09017328646252	-0.163380585316338	0.681647554038851	-0.239684840572355	0.810574587901782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10822011249922	3.45005047674051
Merged-chr17-51041069-1	1.50905096372562	0	1.55815586877413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137661094-1	3.14096810706223	-1.33268533167453	1.18432292929782	-1.12527191588249	0.260473826647021	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79408472100818	1.737158151675
Merged-chr10-80666640-1	1.61217124759208	0	1.8234579960408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90084485-2	3.12717830182253	0	1.40755784419329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21200546-1	2.16386302299678	0	1.42204929358038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-44598738-1	2.00677423412419	0	1.60101038072736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34204161-1	5.85953379803806	0.961983194729554	0.795000160351925	1.21004151031078	0.226262964938676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40120643282281	2.58431107167152
Merged-chr2-73004013-1	2.41353719200293	0	1.48847348024215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77823040-2	2.73113997698985	0	1.41523883342956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4621206-1	1.60743366282642	0	1.59814100673361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123815981-1	3.35265692186976	0	1.42258855351471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114076123-1	2.07654539508085	0	1.51893024047253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9500026-1	2.4269050533413	0	1.43781018778584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125476434-3	3.89813236560329	0	1.41130695736291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42939587-2	5.27570581311678	0	1.38190500446626	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53634984-1	2.74007479930202	0	1.39538984531007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80176109-1	2.32907279487882	0	1.42647552533578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-84065326-2	2.44268802812172	-0.0349182392323809	1.52187263439019	-0.0229442585688996	0.981694736443674	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.413263464506793
Merged-chr13-14036401-1	1.48840973024038	0	1.59034501511392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101720745-2	3.76936406606735	0	1.40310888778405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-68219284-1	3.01850312635787	1.02238951141404	0.915889693498393	1.11628017944918	0.264302223032464	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.786034639139	3.79435913304064
Merged-chr4-150459540-1	1.93889281810729	0	1.77314172538811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20810477-1	3.39394383597921	0	1.38066051460763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20220539-1	4.30566586894019	1.80303000246691	1.29089873980588	1.39672458177319	0.162496409152262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr2-167623169-1	2.45792970063259	0	1.41196647479873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101722854-1	2.78037263163359	0	1.49129668500199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113188038-1	3.98344629936791	-0.342990554228143	0.792626979601996	-0.432726317744534	0.665213607973974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51075943690061	2.71933712458061
Merged-chr7-58396933-1	8.65990348765021	0.26192094335296	0.653349603689092	0.400889419499212	0.688501540094903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20222364918441	4.57538238636078
Merged-chr17-81016020-3	5.06417698377625	0	1.36266592363898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143231055-3	5.44906246741582	0	1.41512524123252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55970492-4	8.59848104169812	-3.00656452731268	0.884329004188328	-3.39982575836945	0.000674288066326132	0.0268610179648542	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21875905320638	0.879366456215217
Merged-chr1-51805294-2	5.74521928859436	-1.73109173630359	0.766384209973731	-2.25877792597387	0.0238972022912817	0.363495185980616	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46712716631625	1.45451904642141
Merged-chr5-17839357-2	3.02388724550849	0	1.39343555775702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16751721-2	4.007402102871	0	1.38734520470292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21959085-3	4.3747200110319	0	1.36792461154723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47168361-3	6.65539219105315	0.822531517327012	0.70202199650239	1.17166060525884	0.241333345390134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	3.07965357752435
Merged-chr13-41520964-4	6.17740112880803	0	1.36634571931018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148707550-3	4.35779855567445	0	1.38887983353158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135400480-4	5.0842071903329	0	1.37133757955813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33698305-3	8.76170690690339	0.804478000286185	0.76483852841105	1.05182724248671	0.292878817785325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90259970934752	2.50736436935109
Merged-chr8-116264634-2	2.86370983435136	0	1.40459363308282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52242690-2	3.42332089056753	-1.88423879450166	1.27403861448753	-1.4789495177582	0.13915380748891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr5-114747679-2	1.93694254834291	0	1.48208660175789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64341830-3	11.9344820440373	1.7083781597571	0.553121445535528	3.08861313106936	0.00201093113690433	0.0626072197428308	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56075331917792	4.77189366558389
Merged-chr17-28515949-1	3.75678704715179	0	1.41757941805784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-55229444-1	2.61566585718025	1.26650575845869	1.31510827524567	0.963042954179652	0.335525967630016	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.18909650862134
Merged-chr5-107944976-3	4.57157450858221	2.07554747269314	1.23884868859454	1.67538416257099	0.0938588819400048	0.874841386038532	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr15-101237075-3	3.87687067439824	0	1.38534503967103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34267889-1	6.42505379120725	-0.35196767212191	1.35665074245505	-0.259438675782518	0.795296792002069	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2050568966159	3.15352940375989
Merged-chr8-95166086-4	9.33929433965114	-0.810096335497079	0.605625038122007	-1.33762028401124	0.181020248783642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52433053254582	2.36364322001306
Merged-chr13-100795681-4	9.34312681146869	0	1.34477882300289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119806719-4	11.8524004643884	0.799889865509788	0.578674454033775	1.38227955275023	0.166885881758543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02889460529794	3.79151498003052
Merged-chr9-123856972-2	3.75826876691025	0	1.36929856665322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13415652-2	3.39556946117156	0	1.40940087136016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5824393-3	4.24421720224434	0	1.41358594101724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53448730-4	5.10485813823547	0	1.37885792108011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66279832-4	4.81109733204969	0	1.37154555934025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102809333-1	8.38879290971874	-0.231757506915499	0.881578520544375	-0.26288923960215	0.792635950246051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35127792357304	2.97716223681224
Merged-chr4-56059538-2	2.82423937840277	0	1.46810776193247	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157399860-1	7.84409158997862	-0.23514130556086	0.621190680525694	-0.378533215214799	0.7050345239822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04598781603299	2.42555541244912
Merged-chr15-76534141-2	3.49207602418418	0	1.39715709580285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33736938-2	3.67251970735601	0	1.39546260381493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93176266-2	3.95737860806107	-1.26254280945272	1.05835436453323	-1.19293012979593	0.232896738057161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57928534738074	0.990919527803163
Merged-chr2-27760448-1	3.39931726620408	0	1.49611903964668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122102287-3	7.54242678908584	0.289500426711843	0.588043051034181	0.49231161936648	0.622499067291997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62606662475342	3.36666453443082
Merged-chr8-123021961-1	1.6689199641273	0	1.57917459842006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68092623-2	1.91698450032503	0	1.57336812942555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-93743354-2	4.27123576546253	-0.00932050136850516	0.968192952041886	-0.00962669822048233	0.992319124753918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	1.79305269258721
Merged-chr17-84698909-1	2.17231394091898	0	1.40661212814235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107277058-2	3.7725076654608	0	1.38310280674333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133424269-4	15.7247820275613	-0.0849024718505892	0.409993353861994	-0.207082556463019	0.835945384755411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90530131729962	4.69005658837618
Merged-chr5-74312064-4	10.6734629714362	-2.03642564842247	0.639387644716076	-3.1849624640882	0.00144772785081003	0.0480152765358037	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36269442308226	2.13118170172995
Merged-chr10-52376635-3	3.8039880967975	0	1.37243643137891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106901771-2	6.38127090545225	-3.15349186346701	0.905554300435681	-3.48238847957521	0.000496962167772412	0.0213552304173443	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5115652409689	1.27743081564928
Merged-chr3-127640035-5	9.77281243062815	-0.789519130983276	0.592914298934625	-1.33159064033692	0.182994742220375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33322067991586	2.06749136006952
Merged-chr7-67479391-4	7.13972180277668	-1.17985322277826	0.846271761862643	-1.39417770502162	0.163263948726563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00523365194985	1.18909650862134
Merged-chr17-34336505-3	14.6848420008715	0.546155341875365	0.654714229815529	0.834188898000962	0.404174546229378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20023722099316	4.10355932838199
Merged-chr7-81162566-2	3.85281339283234	-2.27579158872373	1.26641153408569	-1.79703953057154	0.0723293443240847	0.747339066358661	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	0
Merged-chr8-120766788-2	3.33435625736403	0	1.43787680076156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3873644-2	6.96178670568749	0	1.35277724589575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34269423-2	4.89405990647799	0	1.42019974677421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61469049-3	3.98926681301876	0	1.3839454909332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70543263-1	5.60932708177922	0.247407970516717	0.579387773358836	0.427016208993226	0.669367521705042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10171321013009	3.39227854040407
Merged-chr1-34164801-1	3.17216774959382	0	1.42867041645296	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23517707-3	4.87072387061101	0	1.36218676946492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49772666-3	3.65750741597977	0	1.44827650217818	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54934494-1	3.00835537230136	0	1.41732860711513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61325989-2	6.38969614597586	-0.407292590161742	0.981245067473197	-0.415077337622253	0.678085288878182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.14143228603163
Merged-chr15-12380733-4	5.79591789279951	0	1.35994580794704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-94681007-2	2.99163989379122	0	1.50262794449941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5929161-2	4.40086000757636	0	1.37665498796236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149072811-1	2.39703122285099	0	1.46660725945956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99175358-3	9.53869085957973	0.176804151219899	0.677260119248122	0.261057969006329	0.794047803877318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46922541264697	2.51130439439051
Merged-chr3-21951822-3	3.68651867414783	0	1.38685886765175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125368644-5	7.92021204203708	0	1.36569703164525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70702832-4	18.4413734071511	-0.181247126524505	0.547911241478666	-0.330796510097818	0.74079819716461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17424826605042	3.37676734000013
Merged-chr14-69088678-1	3.11159306559991	0	1.3957062722676	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34025266-3	5.60255290130751	0	1.37232196845402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79511690-2	4.01367975737681	0	1.36445182449771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-23840699-2	4.51547454368714	0	1.43658238891596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42074621-2	4.74659762111185	0	1.367775778593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89317010-3	4.30660701970467	0	1.37789500632272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54078423-5	10.6095811565745	-0.241368461235778	0.614284048083217	-0.392926467794391	0.694373792130533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39633142321475	2.98301079728161
Merged-chr11-53748196-2	3.2368340778213	0	1.43046589262228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30727695-4	8.65470806660884	0.585448571215259	0.777138431331778	0.753338848796833	0.451246319466608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	2.09070350854821
Merged-chr19-17350577-3	8.63583120857727	-1.73372239680273	0.611330146472974	-2.83598380810323	0.00456847621001339	0.115559701396053	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77940983111544	3.02298317660234
Merged-chr2-51089922-4	4.45167604846228	0	1.38876653000784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94340386-4	4.279509518461	0	1.36727885429225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127480626-1	4.84500295724636	1.06816040816389	0.828310403587861	1.28956536527503	0.197201607537634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25293502696286	3.64240553926174
Merged-chr1-55552679-2	8.34635637121615	0.516900147873172	0.642584033676282	0.804408638845162	0.421161013641439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38097024974186	3.41046389021778
Merged-chr5-21355164-2	2.53073577745354	0	1.42291514594669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44072320-1	1.33741322469227	0	1.7632758212575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28419069-1	1.96299184345338	0	1.43383475250768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-10438222-1	2.48630551151961	0	1.41311313754851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108596195-1	1.69179158014971	0	1.47634456287835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72297539-1	6.51915026390088	0.748798790416699	0.734890346127317	1.01892587698651	0.308238157583619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73330667186518	3.86630464853942
Merged-chr4-136879224-1	6.24852214648098	-1.05618519846905	0.785870155437951	-1.34396909102683	0.178958382132632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36411933557284	3.18398545985514
Merged-chr7-125511610-1	3.4794478687065	3.39090376468338	1.20261976121498	2.81959757692459	0.0048083909279591	0.119898771767399	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	2.79660994316778
Merged-chr1-166342770-1	2.19168718117254	0	1.47322637493041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-71917871-1	2.31785802082253	0	1.43279221022446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101253059-1	1.88604702646763	0	1.49963767008363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3343814-1	6.25879395406121	-0.792467520450801	0.797817052110221	-0.99329478901802	0.320566316268535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31447273151311	1.53935718689701
Merged-chr10-117805330-1	1.87478690985084	0	1.46784205729552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116141435-1	1.81392849002998	0	1.51162250184183	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67808997-1	1.71774127773415	0	1.55677428449398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80855489-1	1.82808394699012	0	1.45886818783482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145391790-1	2.04725667245104	0	1.56192919453034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144343487-2	2.19028926219702	0	1.46357859144628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60901067-1	1.2705215940805	0	1.82432340694042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-9684232-3	3.66072589935016	0	1.40345803092326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139725201-1	6.80885544421747	-0.688690064213986	0.73333869693193	-0.93911594614502	0.34767121796213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81517765864336	2.2876212675572
Merged-chr3-136756298-4	6.06565104494908	0	1.38142614942519	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99417190-1	1.54950961508333	0	1.53663165853027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129153982-1	1.72837660275052	0	1.65768500780211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25340199-1	2.88424963183991	-1.90723569381903	1.35984638354525	-1.40253760784853	0.160754768328274	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr12-77791473-1	2.8218705025083	0	1.48110763901825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112308854-3	4.53919252664876	0	1.37790943645853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129366349-2	7.64160502104929	-0.502043090562859	0.835505403898589	-0.600885509800719	0.547916245020444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75374246883657	3.10983454192821
Merged-chr10-20818715-1	1.56529974434897	0	1.67077466766917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61707218-1	4.57607476600803	-0.239031040231335	0.712964741519789	-0.335263479820622	0.73742633998729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43491183200938	2.60219362730004
Merged-chr10-21603618-2	8.59381287777111	-0.622240567263924	0.683353333106791	-0.910569301586597	0.362522351515703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50264640475577	3.89035975916143
Merged-chr7-101027088-1	1.65117259901263	0	1.71874962172998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41322419-1	1.90411981555136	0	1.50247819487306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36915215-2	5.41717609011235	-0.404449369674049	0.87927267302832	-0.4599817349959	0.645529330821045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17022068149009	1.99631334303834
Merged-chr18-35081650-1	0.555730735897554	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-39200124-1	3.24081223613206	-0.0344683001128588	1.06965161158326	-0.0322238565712438	0.974293531263275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66398411766936	1.64434148891112
Merged-chr4-156034942-1	4.54043603714174	0.353320897409011	0.938420286267996	0.376506031017438	0.706540732688328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41083941945204	1.52044370529506
Merged-chr15-51448516-3	5.9455970391545	-0.968871962387076	0.869645206125833	-1.11410027395343	0.265236171141589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45258850348856	0.837303648891292
Merged-chr2-68825179-3	6.58696282240721	0	1.36256256122136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166483856-1	2.45699265637865	0	1.55541694427858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111653703-3	4.05443607776484	0	1.40758880754845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37492548-1	2.44503603310211	0	1.45422134879112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20791960-1	2.57162771711326	0	1.44119749578311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-7277258-1	1.4010536157919	0	2.44719533093828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35210502-1	3.04853984589996	-1.86729112564987	1.16320372734386	-1.60530015658888	0.108427764741248	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56112970471021	0.465515277017237
Merged-chr7-125564051-1	2.97174507926439	1.06549194996549	1.28468637849247	0.829379035851382	0.406889960400823	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88772579123251	2.15537868439382
Merged-chr13-5867301-1	3.26673635343315	0	1.40764804133666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-23815300-1	1.44174892038355	0	1.57071619953003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72116905-1	2.83137830243397	0	1.45548002082079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95763109-4	4.60042549622137	0	1.35983180921332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56033070-4	4.83433115571144	0	1.3595861944921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73096698-2	3.99699425199842	0	1.46030380428537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137611376-2	2.44470636864239	0	1.40906322816055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153115900-5	10.616469529937	-0.728429313591871	0.564368885351255	-1.29069715304824	0.196808712258297	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48762807179304	2.70059870886137
Merged-chr12-54448401-2	2.57307553773308	0	1.46987622212897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81027827-3	3.43452526451566	0	1.39767794899865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189873527-3	5.34706829327008	-3.20861996796761	1.2102901943117	-2.6511162224134	0.0080226229571942	0.173056254496079	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	0
Merged-chr15-51803444-4	5.53060982664849	0	1.35617005241094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39735881-5	6.41852257157535	0	1.3676497351119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9377585-4	10.2925357760721	-0.558884956560423	0.648773584771523	-0.861448384581261	0.388991137386455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50217563705456	1.737158151675
Merged-chrX-155249435-2	2.80302337196859	-2.19574979545654	1.31646324910043	-1.66791575606607	0.095332451429394	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0
Merged-chr15-59249043-2	2.97443701178053	0	1.38532054491857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51153041-1	3.18543276758431	1.29110609286354	1.23167190618107	1.04825488539944	0.294521189246666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.5608848804954
Merged-chr5-118614752-1	2.36906642779654	0	1.47967750808977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148597139-2	3.19825012142797	0	1.39514011747857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123125797-1	3.10729812477088	0	1.38886243752021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21326685-1	3.57166292791192	0	1.37575895807978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-93697846-4	10.7221046923489	-1.20080898580412	0.60646826441989	-1.98000300469596	0.0477031910575026	0.57167058260467	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75720780768535	2.83708527275132
Merged-chr8-4213610-3	9.59422798481945	3.90768183400406	1.09644735809171	3.56394842412234	0.0003653177657393	0.0169874323591297	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	3.08045670249042
Merged-chr11-72520079-3	3.20437375990784	0	1.41785452541419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126869109-1	2.93172800329919	2.03801675511488	1.22485541955041	1.66388352664753	0.0961357076562288	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.25298535761957
Merged-chr10-82767337-3	7.85334952403601	-0.777081827881315	0.708561207079665	-1.09670388403573	0.272770858023598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23781019361977	2.9984573431795
Merged-chr3-30515157-1	2.88424116136512	0	1.41151558848595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114966778-1	8.91714329133284	-0.46895157358651	0.690409612590952	-0.679236738646555	0.496987872561427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61315567616502	3.71732861844942
Merged-chr11-48859243-2	3.17482814501711	0	1.39880320382154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-24142497-2	3.5085477389445	0	1.4609529068928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-109932334-2	7.06898944676936	-0.738298864039947	0.786226792877261	-0.939040580565923	0.347709909670192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10015108892538	1.2960273170181
Merged-chr9-115486283-2	11.2287133637856	0.685335110498599	0.613640601282083	1.1168346896648	0.26406501355357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07684717794855	4.98654241880492
Merged-chr5-123897991-2	5.94310854045515	-0.567126472516496	0.801078859704916	-0.707953362700648	0.478974219745255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06445407952407	2.69989883664724
Merged-chr2-84488105-2	7.50339767920834	3.38043378559976	0.807133158193035	4.18819838001413	2.81177685436774e-05	0.00205161581243726	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	4.3468561096494
Merged-chr17-45630137-3	6.44803890866402	0.46253450792342	0.949285422759053	0.487244928484296	0.626084769662287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17595087342351	1.2636608194585
Merged-chr14-117716544-3	9.45108430870761	0.7537473515248	0.706253126323008	1.0672481627785	0.285859789141276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54596323017769	3.64711721563496
Merged-chr15-99415946-2	3.48558464377187	0	1.41282692982211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125660176-1	2.1745279763181	0	1.43681356363154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84183015-1	1.73696462787294	0	1.47063528621549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28573570-2	3.08028786778551	0	1.43506666435372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44395839-2	2.74280992822611	0	1.42202071482902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83686466-2	3.05236798351508	0	1.39810177628148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49001705-1	2.09217979388782	0	1.41801106264414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80435827-2	4.37266385320519	0.742087121373385	1.14413346757182	0.648601882915207	0.516595738150314	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03338881410105	1.2636608194585
Merged-chr3-61401175-2	2.06218289419379	0	1.49248997693443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85142967-2	2.98758812615502	0	1.41278746459939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31949608-3	6.88694835346315	2.82663397633814	1.02439301081263	2.75932571435237	0.00579207733400654	0.136951514484237	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	2.57446180056629
Merged-chr19-9053213-2	3.007797217283	0	1.41079162114542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94158605-2	2.2976071902694	0	1.57449685939097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78600235-2	3.29526345807746	0	1.4047809339078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122898179-1	2.90172689478528	0	1.43160449652557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54604110-2	1.58066633853154	0	1.74392039493399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94332032-2	3.22005379526465	0	1.40509578646851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20227719-3	4.12044181745583	0	1.38239332408739	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84354223-3	4.53996290380727	0	1.37055584392921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83808203-2	3.3317725760452	0	1.37001303406797	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85841073-4	5.60039408461483	0	1.3619657820346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76705930-2	3.12620243409392	0	1.41272895225255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102500201-2	4.07293690827669	0	1.37988899696112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20860773-2	4.77598763834773	0	1.39823975065382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46815708-3	8.41806789594847	0.663556467350705	0.899365153250388	0.73780540079027	0.460632710900198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53823966306787	1.98169183227544
Merged-chr19-32792817-1	2.53837331585344	0	1.42192992274658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75920060-1	4.21762107213517	0.559232145193127	1.11272759013553	0.502577764900223	0.615261165388474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74879361603124	3.08356688118183
Merged-chr17-47598176-1	2.1225661369692	0	1.5165626838439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117089406-1	2.79736575682197	0	1.3930721670783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104822620-3	4.40206049771677	0	1.39494697524392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-65744645-1	3.11927309499995	0	1.38737272124016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122061075-1	2.95385684989054	0	1.38866314442145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25796552-2	2.98528380416508	0	1.4571228098052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37502746-4	4.42518180651048	0	1.40150388391774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4570492-4	4.45587442834525	0	1.38586358094989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108485428-3	3.73219219352993	0	1.37151226608963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70806129-3	4.83467777252311	0	1.37877635980364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59326814-2	3.04808572770546	0	1.51180072587133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103233284-4	10.8691061961701	0.286684114121184	0.609980699044368	0.469988828450343	0.638362999106985	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.058873647238	4.01430210524448
Merged-chr15-93287805-1	2.21553293823072	0	1.41734469953516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93777291-1	3.96446913132144	0.159766437594818	0.796846807624049	0.200498309168348	0.84109088023815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81960882153758	2.46153873000129
Merged-chr1-120251387-1	1.68536232691518	0	1.45662568624755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106901996-1	2.63139805898273	0	1.47393490259275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-107336813-1	1.72285135606704	0	1.49233667201178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-10177912-1	2.69411236358449	0	1.43357129173459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32370411-1	2.08617598479323	0	1.42473626587647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9507954-1	1.7548721520398	0	1.65239092008693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-129998394-1	3.74947255031613	0.67926039866701	1.21911361979348	0.557175629603807	0.577407438701058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	3.10335454287586
Merged-chr15-77830885-2	3.44611742277428	0	1.41131426786082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111179164-1	4.81869981762234	0.0297856441718123	0.869864049464751	0.0342417233936041	0.972684395577668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8405601103675	1.70869404742316
Merged-chr18-11835175-3	9.06668988734715	-0.333271745001672	0.642926376328065	-0.518366888142125	0.604202312547626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85256114530448	3.17230311583558
Merged-chr6-120145292-1	4.09198747354329	0.836752971486557	1.02460462908269	0.816659370586375	0.414123116070939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.74618975104912
Merged-chr19-40693964-1	5.2912747351186	0.959013917159063	0.920122347085545	1.04226782470473	0.297287525313477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36645504233657	3.79941029751603
Merged-chr10-17038088-1	2.40553726191818	0	1.45577900295784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104296093-2	2.98899866249386	0.615596067211467	1.4569165027863	0.422533526138363	0.672635634972034	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr18-40459120-1	1.54973876358947	0	1.53008749936804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135793890-1	2.85957560053399	0	1.40879271257628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34817238-1	3.67648009691278	-0.554109822125652	1.12489624969453	-0.492587491758573	0.62230408791892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34751231442233	2.08973793870974
Merged-chr18-39368134-1	2.78571651936323	3.14420773590974	1.16537173796342	2.6980298504617	0.00697511858475709	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	2.95523309947926
Merged-chr10-99485814-1	1.95497453293266	0	1.42746675622076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128464902-1	1.1742684242659	0	1.6708972572973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-55415584-1	1.11775281685628	0	1.79385844421051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-57697300-1	2.98055598000597	0	1.44071216084109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63990082-1	3.42432674449965	0	1.39579802504523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71297894-1	3.9061374500896	2.90941654940073	1.13757040545106	2.55757053406036	0.0105406179264319	0.208279698241698	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	3.79404271611876
Merged-chr15-84312686-1	5.76981596948596	-0.462036801474941	0.833640704361761	-0.554239733085824	0.579414789314367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27569420235585	2.71942640836769
Merged-chr12-17707359-1	5.65987259472273	0.923501336595029	0.870452918722482	1.06094346601813	0.288715594208903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65199033198162	2.19148386188384
Merged-chr14-90235166-1	4.30185305515301	0.310822862732033	1.50908449638876	0.205967832467851	0.836816038521829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82574572435485	3.03727375913195
Merged-chr11-19823707-1	3.90824356312364	-0.611773852305949	0.876721577303704	-0.697797189145746	0.485304037206449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30999519426894	1.28051966905443
Merged-chr8-66914315-1	2.25656725671953	0	1.42389690550188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-32902717-3	3.71432776472004	0	1.40280022397249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119372256-1	3.21189878442252	0	1.42348562389738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30673178-1	1.39788895357171	0	1.51857768146943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121985292-1	2.61703891071961	0	1.40749078738159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-81745676-1	1.03366074095977	0	1.54942583751675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51334196-1	1.99948188079907	0	1.45400028666552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28777043-3	4.53627105444611	0	1.38696481730472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142779536-2	3.14095628096801	0	1.43910211685253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115160150-1	7.08688839154564	0.562170678066187	0.546805902874589	1.02809913922075	0.303903195512328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39381651296295	3.88758720678861
Merged-chr6-117881477-2	3.62150612302655	0	1.38100678475628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138848269-2	3.21243132229972	0	1.39931376854219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32194981-3	6.17386108879361	2.28811395948837	1.05104042497464	2.17699900509876	0.0294806416719025	0.418946781962249	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.08990416182602
Merged-chr10-26753337-2	3.19443466802002	0	1.43835844225734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52793726-4	13.1541031916387	0.168401734913856	0.524854127443518	0.320854359541982	0.748320762463693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17571759051381	4.32698808341703
Merged-chr9-41059189-4	18.3303999991531	1.33022288549751	0.571585869583518	2.3272494235499	0.019951993914674	0.319649406780951	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74448586799323	3.89869059145498
Merged-chr4-83567874-2	8.4679996701447	-0.709905222246169	0.754116117080442	-0.941373889467533	0.346513289344249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05891966522476	2.91657207826007
Merged-chr13-3779307-1	3.77403861180259	-3.36675422949306	1.22580204922116	-2.74657252501104	0.0060221569637818	0.141098191050649	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88508609669565	0
Merged-chr1-156465319-3	7.5397883556231	-1.52859333512289	0.714289423415437	-2.14001955651785	0.032353186315305	0.444674299598904	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54890790413456	2.47318570338575
Merged-chr11-117721960-2	3.86237602254654	0	1.37028510842264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37014461-2	3.24486869077812	0	1.45220379360866	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-28182118-3	5.59829196569723	0	1.39075222243591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68044225-1	3.32680169643973	0.61843978612387	1.42876952802187	0.43284782744499	0.665125324721758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr1-59341007-1	2.79318715552248	2.18342428580879	1.40343555402767	1.55577096471773	0.119762564808136	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.08918047352118
Merged-chr8-125311404-1	7.83400701514986	0.209614695051981	0.729528120710393	0.287329150311388	0.773860304526559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87231699783625	2.93150302751082
Merged-chr10-44453995-1	2.07438350465963	0	1.43927240310596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116678312-1	2.29800656173365	0	1.51498602190684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148754580-1	2.07400824876091	-1.28574846511293	1.44757248367227	-0.888210075568159	0.374427760027619	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.413263464506793
Merged-chr4-11031910-2	2.87711248400378	0	1.43689766437007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73395696-3	3.90372943872495	0	1.38799566694934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70587195-6	13.2109153742753	2.11362997124692	0.723903291592765	2.91976842182388	0.0035029158154392	0.0957340376125991	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	3.97801329801484
Merged-chr13-44832314-2	1.89840417928787	0	1.48276738856075	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86444706-2	7.37574326530635	-0.730604025975297	0.844622396852661	-0.865006692573826	0.38703511548204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33322067991586	2.09965233491124
Merged-chr12-56241952-2	3.36935992439415	0	1.39924753471517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125349890-2	4.84434098108664	2.67067985059429	1.17351328722296	2.27579856118568	0.022858068907408	0.353095131496957	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr6-37722042-1	2.52575380602521	0	1.47606390346791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-75622088-1	2.19398934511897	0	1.4504649423712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91108276-2	5.46047236877569	0.805411228018959	0.913058929719817	0.882102131421144	0.377721579713606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	2.35237957254822
Merged-chr6-122577068-1	1.31950807695292	0	1.58269003222623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80639926-2	2.81453064324116	0	1.53688067441743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34666242-1	1.46225893177166	0	1.66726860371097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41647186-2	7.46452398036094	0.257753432690113	0.60797953940913	0.423950833839924	0.671601670211968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19355958357094	3.44408838055681
Merged-chr13-75871410-2	7.23921242883705	0.385733181420609	0.850773989526785	0.453390896018295	0.650267290855636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	1.86501351763573
Merged-chr3-38130297-1	2.79480941879793	0	1.40817798492563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95861518-1	2.70511892847363	0	1.41069398444909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131270438-1	2.19607245420018	0	1.51717785576096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-30872159-1	3.52779921277274	0	1.37716157010638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-19954555-2	2.89085821496973	0	1.40982817344332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90731655-2	6.61449713930935	-0.299088241142415	0.797536065123003	-0.375015318080051	0.707649074475083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25040649316846	2.42242889244926
Merged-chr2-153562502-3	4.42875193440469	0	1.388253078232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51738282-1	4.69584061511838	-1.34772286978803	1.00910946739097	-1.33555665994546	0.181694224031867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63415770276585	1.20027794713453
Merged-chr15-96722472-3	4.23576272053573	0	1.3874579952529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60289430-3	3.10099457542135	0	1.45359813944943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86599510-1	2.07106581253328	0	1.47933264618301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27708118-4	5.54904542973822	1.29214983573385	1.13063977510184	1.14284838034949	0.25310154767652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.788686275880602
Merged-chr6-108536660-3	11.5609281675802	0.287800389850555	0.484147608978612	0.594447611664791	0.552212771878136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57505325997083	3.92275662584856
Merged-chr1-74245111-2	4.20869508348057	0	1.38875603539097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92630359-2	5.97998413779201	-0.982356690639151	0.804150139592547	-1.22160855575664	0.221855691620061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10209846903774	1.69378000693571
Merged-chr11-110972826-2	8.55318310783225	1.16325927687934	0.588436662100117	1.97686403958532	0.0480570005760017	0.574643751498213	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98799385843465	4.02020791426993
Merged-chr1-149833144-3	4.4626688024562	0	1.36052147283995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31252541-2	4.19683504794197	0	1.38440091372781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54786130-5	10.4560430493583	-0.152970289499901	0.516059107525234	-0.296420094654411	0.766909281196622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87111517104428	3.95776018289958
Merged-chr5-129999692-1	6.44898094977918	1.41837464910689	0.810129116812065	1.75080072999762	0.0799802408296121	0.793923018033854	C57BL6J_F1_Control-BALBCJ_F1_Control	1.3480509837169	3.05563112439572
Merged-chr11-75032013-2	3.81196965876372	0	1.37947860267032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81402601-2	3.90556291400043	0	1.40097578843479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80951924-2	7.73871827019731	0.681648495874682	0.595212451461221	1.14521881086537	0.252118527981453	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2037485121767	3.78181276729801
Merged-chr3-105948522-2	9.25988741309983	-0.609988801343343	0.608258109086021	-1.00284532541609	0.315935495920583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77501073527537	2.73829335500344
Merged-chr14-25608313-2	3.94342694012687	0	1.42599152355941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129200119-2	4.55505662157195	0	1.4270043081482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67215317-3	3.57046602713411	0	1.39050830190207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70166916-6	16.4622278370511	-0.413321759708074	0.423479261216594	-0.976014170140613	0.329057442315218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50750187608427	4.10547264786227
Merged-chr13-102958721-1	1.9212223148273	0	1.58009249639241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86343629-1	1.83650442128748	0	1.46564026791897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54610142-2	3.01292482592278	1.84113637563924	1.3845727152505	1.32975058323761	0.183600462624276	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr5-148649706-1	1.82348331132527	0	1.55187162697465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89638218-1	2.06168989312446	0	1.43859680102451	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-42987150-2	5.65231668189463	2.8921164911233	0.892036391626888	3.24215078921689	0.00118631236214653	0.0411005441006521	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	3.78324729663424
Merged-chr8-110384927-1	0.934782012874088	0	1.64281444418755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82812290-1	3.28516629408615	-0.258875978277689	1.18421446869362	-0.218605653892467	0.826957248156847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80193137221517	1.96553638363633
Merged-chr18-53529003-1	2.09810548581513	0	1.41082359801222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146078399-1	3.21475542514786	-2.06484305945831	1.70588289033905	-1.21042486043571	0.226115907212524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26084277246375	1.27992882773773
Merged-chr5-101932161-1	1.65877722826594	0	1.51381107058596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105720794-1	3.25749837804822	-0.418997501888482	1.12858457603936	-0.371259284225651	0.710444420759957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	1.02674429890598
Merged-chr4-52892702-1	3.69580969086085	-1.06542934147634	1.11323213235595	-0.957059458229577	0.338537245034066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04828035860944	1.14143228603163
Merged-chr1-177478755-1	2.5982530967097	0	1.4461705673613	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110622047-1	2.53981867388383	0	1.437080166827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125364131-1	4.48929551321635	0.994007297838858	1.01972839519945	0.974776521393659	0.329671125795474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50745359125981	3.39118144042353
Merged-chr11-102209921-1	2.50680697820924	0	1.44137866093535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134143555-1	1.85675291924237	0	1.52800177294574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-151491111-1	1.13170417957006	0	1.78974892513873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-23194387-1	0.983570843784536	0	1.62421991737607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74964753-1	2.30515102055673	0	1.43551180477867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134259090-1	3.92669432630907	-0.641169322450996	1.03535949103951	-0.619272173578338	0.535737072595392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43918820551122	1.60650301571838
Merged-chr11-59549572-1	3.50649105610895	0	1.40527190942557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104524658-1	2.83458310544646	-0.895919360659471	1.04350928226066	-0.85856386319684	0.390581182324522	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03933265466087	1.27992882773773
Merged-chr14-63164947-2	3.63044904868497	0	1.42961981486731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129431512-1	2.95499341700108	0.96638034251335	1.31292843549081	0.736049518306065	0.461700562862523	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.02748994520012
Merged-chr5-45580575-1	2.4965200128419	0	1.48456879403732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117841096-1	1.55221674015144	0	1.52402784340277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117885126-1	1.84708153839193	-0.781810797518979	1.28565960779234	-0.608100925610829	0.543120538380957	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	1.13743241080208
Merged-chr6-24109331-2	2.11943323207663	0	1.60359080453398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30740910-3	3.79199585643634	0	1.44523980271297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70605321-1	2.87969889384597	0	1.39297066135379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81800983-1	2.41134120904735	-0.0355385804387993	1.41791571443896	-0.0250639583699524	0.980003948199245	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr8-61967218-1	2.27321045946858	0	1.50855043788666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134127827-1	1.98927036879547	0	1.7503149290007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16190131-1	3.45414875126719	1.37199723900926	1.18508280682771	1.15772267651229	0.246977226871128	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.788686275880602
Merged-chr5-49439476-1	2.9199913979652	3.10812137729071	2.18660628488417	1.42143622232173	0.155189982370739	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	3.00493079604589
Merged-chr4-58739376-3	7.5480068647064	2.25702624591127	0.702115405408207	3.21460863630964	0.00130622477599263	0.0444841101933385	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09973317021014	4.17852543430821
Merged-chr2-3050234-3	4.28068008902923	0	1.4077784319021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134607486-3	4.11462089461217	0	1.36206015821718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47600130-2	3.39110145928308	0	1.42438336939346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115077540-2	3.35814280888058	0	1.4214127499934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3746288-2	3.33299534285385	0	1.38082637051066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71448769-3	3.50063917654664	0	1.39121835916848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128535365-2	3.41971640294612	0	1.38622775508967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145304255-3	9.16855914362626	-0.0991295743978364	0.598057765363799	-0.16575250776576	0.868351722316374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7437452164478	3.66992891384432
Merged-chr18-9731624-4	7.80778037002504	-3.13051502231944	0.883820162143546	-3.54202716390509	0.000397064582675546	0.0181074107799161	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79065801562785	0.724326877898254
Merged-chr11-116095758-2	5.49600423907314	0	1.38712332092965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143219569-2	3.70521598907294	0	1.36823800786066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36286268-2	5.35131007562286	0	1.35837343486303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148878921-2	3.02293933236608	0	1.38731999196807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14619596-1	4.10632874390472	-1.50416098721979	0.996191879834592	-1.50991090940186	0.131066158589721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61960051891651	0.838451940269823
Merged-chr7-47054795-2	3.19291805578754	0	1.44895059195208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80150797-4	4.90655843180898	0	1.37619402917852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152043671-1	2.34756691464718	0	1.54394779693379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83639232-2	4.60711526859204	0	1.37816223008943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86804822-2	7.03819360481148	0.841996472405675	0.788932292374947	1.06726075297411	0.285854105392599	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	2.80297104004886
Merged-chr6-67168506-2	4.52349329712496	0	1.38580045953858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83838394-2	4.39592472026084	0.224006816300589	0.967211212388821	0.231600723225009	0.816848145731234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.69069428015607
Merged-chr11-61843678-1	2.69981113966498	0	1.41176820156318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59264928-2	2.70930511422869	0	1.39434196428975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86836125-1	3.19911733534504	0	1.4048748621547	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79826073-2	2.06491091091169	0	1.47027790022918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9509120-2	2.60774565201581	0	1.51122629108064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19000607-2	3.0798046182476	-0.0328875855296585	1.6624779161278	-0.0197822691120369	0.984217062315567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr5-100635833-4	3.99237045784308	0	1.38264672259122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135691653-2	2.71329086419555	0	1.44042104805608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36658000-4	13.6980736264659	0.925744182956356	0.646477449273966	1.43198217354066	0.152148923116336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18395292683035	3.57482160785458
Merged-chr9-95783830-4	4.60989926155892	0	1.38735321246671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80174347-4	9.45913740145573	0.0783068450070536	0.732772214251177	0.106863829555922	0.914897008657006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7465031213341	2.10751609739453
Merged-chr1-91523929-2	7.86676318998324	0.452867067601427	0.671912825664727	0.673996760150252	0.500313373459642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47498222380918	2.29457836240096
Merged-chr4-150862892-2	3.70434483153706	0	1.36962612330342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112998566-3	6.69264406954295	0.458622053912077	0.839849761875003	0.546076304038215	0.58501348745318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.610618888618
Merged-chr2-46662057-3	3.64858128583567	0	1.42962387131692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111746203-1	2.9699251897239	0	1.42695166002328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27285909-3	3.11218489676487	0	1.41600773490494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-62832651-3	4.44871174669112	0	1.37977581842292	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97547245-2	8.71661142796512	1.27254562898684	0.546575707237032	2.32821475989048	0.0199007028246386	0.319203984905438	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82628705061779	3.91064230470003
Merged-chr11-50018961-4	4.2289569938545	0	1.3742997498635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45612345-4	9.13282517899728	0.789693633569911	0.576929564763135	1.36878690537229	0.171065895276415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96697885690605	3.90390512078756
Merged-chr11-21179252-2	3.338420954392	0	1.42734041026657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45579054-2	3.22116393804666	0	1.41833838377237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105813479-3	3.23975336438424	0	1.38351779819981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124605549-3	3.96438776477796	0	1.36825991793962	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136464397-3	8.8295181752388	-0.110411446386547	0.556497030113138	-0.198404376684813	0.842728693412814	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79622340258653	3.63962386798072
Merged-chr6-145417155-2	7.91010444817894	-1.39294828379364	0.733747280923729	-1.89840333314766	0.0576429708842576	0.650220845465316	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85298836086041	1.737158151675
Merged-chr11-119395464-1	4.30161999434251	-2.10471795821845	1.14093408582264	-1.8447322981861	0.0650764900942402	0.701048934806342	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97634481356229	0.465515277017237
Merged-chr14-31391880-3	5.38289323611719	0	1.35663709611952	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24809032-3	7.82920349880194	1.83815864121184	0.695233239458003	2.64394527891798	0.00819459028419497	0.175719815881086	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25838937565246	4.37557374064886
Merged-chr1-106174885-3	4.36579714444508	0	1.39437988910464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124257612-2	4.81798652049564	0	1.41590372695652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40189831-2	3.17342285215415	0	1.41882669465455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19222677-2	5.86152153215039	1.0557072820451	0.926038664879439	1.1400250573582	0.254275861988873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.94842033677601
Merged-chr8-14523247-2	3.80692283004926	0.632938573645528	1.42114146532327	0.445373377027987	0.656049948509728	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.601513806634888
Merged-chr2-180925375-4	10.7156249440925	-0.343789912435649	0.50452839754112	-0.681408448188745	0.495613078713504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16489774762151	3.85009206613594
Merged-chr5-43921778-5	16.0580072663449	0.44585944438961	0.37654957178915	1.18406573209243	0.236387043767019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5347767149077	5.05215135335969
Merged-chr7-110669595-2	4.20022344647887	0	1.38577209352301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-81954569-3	5.15084696457246	0	1.37150095500574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132011653-3	3.6898030903723	0	1.40528391969316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26501046-1	5.34761117413021	0	1.46533220164372	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36203558-3	4.51066162322837	0	1.37366589752957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35708629-1	6.03807691586019	3.07882938731607	0.925967113034676	3.32498783593492	0.000884223927368896	0.0326089066946037	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	3.72747431313562
Merged-chr3-105796893-1	1.97533781353529	0	1.42959385160541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81049695-1	1.69021382121164	0	1.57400263321152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87954831-1	1.81281394554309	0	1.58725562006231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22873550-2	3.60605579097625	0	1.45798260061878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32421234-2	3.60881798791265	0	1.40569708539873	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4805842-1	1.2433067756067	0	1.96807338039898	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-132430200-1	0.998653271668561	0	1.885129081584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40485463-1	1.9166327402752	0	1.46671723588033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145802857-1	2.04437018331533	0	1.47867276403953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52292148-3	4.76831301348268	0	1.4585860318408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85473537-1	2.05287435893459	0	1.46615429406761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61703274-2	2.97731224735064	0	1.40131285223402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-33207188-1	3.02286257949023	0	1.40932993111374	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17906167-2	2.87881518769523	0	1.41146123142543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82767245-2	3.46272996241669	0	1.38478217110829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153802658-1	1.85075721961034	0	1.45376672639904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55818013-1	2.82320611407367	0	1.40839028762521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60710117-1	1.99798283172419	0	1.44214243591869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64396374-1	2.29024451347214	0	1.44249290303963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109294601-1	2.88432781533899	0	1.43234915241184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130485197-1	3.68166802858058	-1.83130941314245	0.957451794545302	-1.91269098201664	0.0557876243488829	0.636651972235956	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73286936392936	2.30417511455525
Merged-chr4-104193686-1	1.41886780754252	-1.89181937405835	1.66822226053342	-1.13403316741106	0.256780635619978	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr8-103919516-1	2.40095410841424	0	1.42944110193903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72162747-1	3.82864994059822	0	1.37338745087726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47064384-2	11.3622560684986	-0.219376743681273	0.65847609763635	-0.3331582489763	0.739014832018648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02980949136655	3.27180768826556
Merged-chr8-47917230-1	1.63397156515394	0	1.58878276026332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45378893-1	1.52701895811993	0	1.4938299115007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24655338-1	1.85794862566467	0	1.53374170427488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84744967-1	2.54252738165358	1.71758969868192	1.08823096265943	1.57833195122886	0.114489369305934	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	2.75442883996021
Merged-chr11-46775399-1	3.37368562956788	-0.0309459720303257	1.02496299870397	-0.0301922821306289	0.975913703694662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.94927122251658
Merged-chr12-24786032-2	4.88007970818321	-1.02985016683398	1.05151797584579	-0.979393781647542	0.327385448428743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84022605426951	1.28091929990772
Merged-chr8-40998871-2	5.2460220871969	-0.495826223407572	0.938891217329516	-0.528097626493778	0.597431578131717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	1.51367483677305
Merged-chr8-94953843-1	2.62965995404765	-1.22810386751924	1.35949885473466	-0.903350424490748	0.366339942454721	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.984484304269093	0.303163067301871
Merged-chr8-38096406-1	3.66474279554886	2.50774230818481	1.31449012563651	1.90776808381918	0.0564211975786569	0.640827388043922	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	3.39757739426498
Merged-chr8-126589299-1	2.8651583502327	0	1.39841664760587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101362623-1	10.7950785516028	-0.319498403651894	0.480229650217155	-0.665303367893715	0.505856476905568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07802754406892	3.83288285085575
Merged-chr15-44625002-2	3.65508609622423	0	1.39034586035196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16525102-1	1.83231370030479	0	1.46194600305951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146583678-1	3.9758291694234	0	1.4002502599174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48333256-1	1.67678595922274	0	1.52724433136637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101776071-1	2.68547041048781	1.27710214481	1.46446374121914	0.872061293744857	0.38317494039554	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.790093605168944
Merged-chr3-136080187-2	3.35444554284209	0	1.41618984372532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25043629-3	5.50397951267437	0	1.37459004712131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39695522-5	10.4919985309068	-1.95294202374748	0.714503395678203	-2.73328585358752	0.006270588473605	0.144189051961377	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71571771627948	1.7349297513737
Merged-chr6-120471462-1	4.16421687599835	3.60355661289563	1.16410413059414	3.09556208778027	0.00196440241517232	0.0614401328460022	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.01799703720554
Merged-chr1-136175354-3	4.26889458457834	0	1.37021565794153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60037207-3	4.92141731330209	0	1.35754546934899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72161144-1	2.0063074272637	0	1.42212422875172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54078752-1	3.07616196088564	1.07498067189022	1.45140906049912	0.740646245876784	0.458907959956689	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.18984215491549
Merged-chr11-40857674-2	3.14482966372988	0	1.41403169649156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72934324-2	8.32371684619637	-0.971867406725643	0.672924552334275	-1.44424423712046	0.148670285324462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20213796229157	2.12382511851675
Merged-chr8-34744374-3	9.00021959656206	0.435408166356691	0.643180726031067	0.676960842784428	0.498430799008449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52234002410264	3.39023775585919
Merged-chr3-136790368-2	3.5332960375674	0	1.41526262530662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106571000-2	4.44439726679395	-4.63075528732853	1.17492755090822	-3.9413113461753	8.10373575903527e-05	0.00492191030307708	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81458991729633	0.303163067301871
Merged-chr4-42960147-2	10.8773107100861	1.50681012724185	0.649079878810261	2.32145561190986	0.0202622671024048	0.323096678621186	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51791840140237	4.81390761503718
Merged-chr9-56506568-2	3.93639997843676	0	1.3712179558327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121628054-1	6.99168031458421	1.12448370317721	0.819352355671332	1.37240552906675	0.169937229856969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86449426151314	2.46682207995877
Merged-chr6-38531411-3	5.81458662886614	0	1.35310448015248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74679309-2	3.24583801466144	0	1.3853431005848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16675201-2	2.81001690533506	0	1.43123078396738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40384009-2	2.47578030065362	0	1.44408418959733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28713384-1	2.5459973692388	0.753525495041068	1.28949547671676	0.584356834627796	0.558980261643996	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.45526469271556
Merged-chr7-122308096-1	2.38043224280991	0	1.44941280909427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35105537-3	6.42852218667703	0	1.36854157100968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151422376-3	3.93196996093828	0	1.3648465652838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30287208-6	16.0918080735187	-0.38895033838845	0.417869729718424	-0.930793284908525	0.351960503944462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44947080783995	3.98757854553444
Merged-chr14-54448122-3	8.59029688891749	-0.0407982892197503	0.729894557658122	-0.0558961411503768	0.955424544941652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38143979781795	2.79231662755502
Merged-chr3-141862982-3	3.8676216319117	0	1.39438997548301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25130117-3	12.0983635215516	0.991309102048201	0.564435559919771	1.7562839275915	0.079039940231366	0.789513434589641	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18069912612627	4.79330374561566
Merged-chr9-56209006-4	4.0439255759617	0	1.40720331392629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111994025-3	4.53019565630817	0	1.37261402383501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-23565745-2	2.53890938321271	0	1.40481700350384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22747314-2	6.83464731322532	0	1.35638676228968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43223729-2	8.05478125389358	-0.62814672958594	0.721869710782253	-0.870166347477372	0.38420950374207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83260079823897	2.30741877293786
Merged-chr11-48913803-3	4.11571437256716	0	1.40695772274492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52116044-1	3.12598197854352	0	1.38288030063388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-18892411-4	3.97494640034418	0	1.37213020903045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-81462864-1	1.98460667717795	0	1.49456118609795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123591421-3	3.31476036152854	0	1.40247606703358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102819699-7	26.1405667692106	0.288958614845847	0.465496195491493	0.620753977464307	0.53476150841464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.01515703735024	5.33484410725996
Merged-chr4-138464082-3	3.65673479858976	0	1.40273654999355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59333630-3	3.93193845612182	0	1.38054101646882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118663154-2	7.49689760403112	1.74540211215349	0.641486967433083	2.72086916923306	0.00651105249524	0.148209964768585	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68041597300842	4.04105917656379
Merged-chr14-118986857-4	7.57515675632945	-1.17760712948689	0.900811387669078	-1.30727380404687	0.191119737668665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62268962798352	0.730937814817307
Merged-chr15-78447847-2	3.30048592359574	0	1.4102858409834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-151536069-2	4.38779667089208	0	1.37170551380559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36050469-2	3.08647445616636	0	1.41321325905021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100525395-2	3.10955086747987	-0.601053964298517	1.31292534435766	-0.457797518253088	0.647097918959487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.55634759613363
Merged-chr8-85007911-3	5.02790501235599	-0.277413544675365	1.17311571398924	-0.236475857724219	0.813063438840254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	0.723581231604105
Merged-chr5-30840002-3	5.10110749350781	0	1.37465132551275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26408446-1	4.54271379053702	-1.15884634210248	0.95982766012332	-1.20734835038364	0.227298017560367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79958479173889	1.44790810950236
Merged-chr9-40506646-3	8.91003782770326	-1.00077229192467	0.808532707078241	-1.23776352293913	0.215803757523071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02779196282874	1.84249433723732
Merged-chr10-5600317-3	6.00003992356649	-0.324152668757234	0.723793454474686	-0.447852445684933	0.654259690329614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31480678761111	2.12382511851675
Merged-chr11-18877670-2	3.28996480888557	0	1.39393057046213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79863637-2	3.66959125176904	0	1.41151272482984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11611660-3	7.32794641645095	-0.369775736011034	0.841753383101182	-0.439292248103249	0.660449790401594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	1.38647389072186
Merged-chr11-121176434-4	12.9991028502516	-0.203322648510155	0.534501613409398	-0.380396697426657	0.703650965775673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18460610118915	3.75968142283943
Merged-chr5-77229181-3	4.36702615377494	0	1.3879246401452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5747218-2	4.66855033822413	0	1.37259538190994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44356549-4	5.11174508974479	0	1.36160938991418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117390467-4	5.31747079605495	0	1.36306378474259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-75245035-4	5.06486511635083	0	1.38945278513597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146833670-4	10.2737450309836	0.265137823083453	0.553690513309413	0.478855636335038	0.632041333395528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24988086403977	4.42247001796418
Merged-chr3-144401450-1	2.4895464945391	0	1.41364441800229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126602093-2	2.43790685619607	0	1.47901307758814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62006759-2	4.17638508262624	-0.397880485054141	1.15263351418569	-0.3451925353179	0.729949630224131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.67591700901439
Merged-chr16-76130181-2	3.40405290750149	0	1.38746765357481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44121068-1	2.27913371667178	0	1.49165182714907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120887367-1	1.43230883049757	0	1.628298487935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34057084-2	6.01784116275513	3.33902127482031	0.84307743976535	3.96051550821909	7.47881355117273e-05	0.00460408636272025	C57BL6J_F1_Control-BALBCJ_F1_Control	1.33962963608869	4.19605583236879
Merged-chr2-135488499-1	2.30427771806055	0	1.45526089638599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76220579-1	2.24423891508024	0	1.43668895532124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118821460-2	4.27996292957288	-0.0323793163018092	1.20902211639871	-0.0267814094238879	0.978634081030474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr12-84752830-1	3.75126016702259	0	1.40203501221694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84120154-1	1.87893149951433	0	1.45454325566918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51575781-1	3.94132597542881	4.13409140441263	1.17568587832817	3.51632309328349	0.000437568150680017	0.0195606637358677	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.58187719117027
Merged-chr16-73650569-2	3.54813202792019	0	1.41143164454571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31196570-1	2.85383309861817	0	1.44290570459996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77355526-1	1.25438984967351	0	1.64181497514124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-127776746-1	1.89515164800149	0	1.56355453631496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120967631-1	2.22833232970714	-1.31275405827299	1.28084022067114	-1.02491632998933	0.305402668670234	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.601513806634888
Merged-chr7-67546477-1	4.99556492391379	0.397685377102222	0.876311637980795	0.453817294973477	0.649960334453124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46812004905329	2.39675716585026
Merged-chr3-144669172-2	4.5189058660103	-0.309282773079371	1.1717688278895	-0.263945213183754	0.79182213551817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.18909650862134
Merged-chr15-35664200-1	1.15205384325193	0	1.63086128011225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166105672-1	1.99744657984806	0	1.47276571923541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16121296-2	2.68346195049368	0	1.45080030129884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118172579-1	2.01624800563342	0	1.46359601444779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25543752-1	1.63970531478373	0	1.68590634165657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95206889-1	1.98921466454895	0	1.53096104894918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12225036-1	7.91817883234011	0.159785987437569	0.685415209208013	0.23312290899147	0.815665966128743	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68288590984957	3.22912525082811
Merged-chr13-94476409-1	1.99683248376377	0	1.43149188752412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130851671-1	4.40773935187935	-4.7975121066134	1.12414518366818	-4.26769795958091	1.97500486471474e-05	0.00155818997737342	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55373189562152	0
Merged-chr5-104963440-2	4.95994731679678	0.349691130520057	1.32876594633448	0.263169846792591	0.79241967061328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	0.948471875794396
Merged-chr1-84251420-2	3.38970360476873	0	1.41808802631002	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49193223-1	1.65108854334	0	1.56791973284193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129314526-1	4.69716989355221	0.725203189006082	0.827696276968412	0.876170654847295	0.380937266962821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03992838736715	3.49521036346291
Merged-chr2-101835096-1	6.43411290544156	2.06984167165221	0.837060516247666	2.47275033462431	0.0134077773793355	0.246838945568954	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75485430327507	3.68575166050974
Merged-chr2-28681830-1	1.70391368824986	0	1.49943184783254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164670464-1	2.82774781180931	0.406586639524566	1.29222227060597	0.314641411754887	0.753033932894752	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.879366456215217
Merged-chr13-75542763-1	7.59196800937606	1.10951954286331	0.760451610493634	1.45902714591279	0.144557636346804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37073167707971	3.20906869787244
Merged-chr6-72022075-1	2.56955614392139	0	1.48567586921384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58980088-1	2.41094475911565	0	1.49447158178759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46938278-1	4.03789166693728	-0.871594303814858	1.00868904293571	-0.864086221535775	0.38754052745621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56343534314907	1.13341594473881
Merged-chr6-87513575-3	3.98051996663077	0	1.37864199474999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33372787-1	2.70828463758615	0	1.42620514975418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105656375-1	1.34453054408493	0	1.55488495655581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67089265-1	3.17398883290287	-0.297576706947597	1.18528891263081	-0.25105837385006	0.801768978212501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.904676873936758
Merged-chr13-9430155-1	1.94871207167416	0	1.51720719937254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21145415-1	1.73976218111295	0	1.46044136411267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54563648-1	4.40643991723955	0.646563189985665	0.803458709695188	0.804724850429408	0.420978476004325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30923017122179	2.78389072722304
Merged-chr7-33876100-1	1.02519289481237	0	1.66584518058298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148999064-1	3.97695219016279	-0.383126198409953	1.18716780257349	-0.322722868308446	0.746905131669703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0.67591700901439
Merged-chr6-53375602-2	3.50261167996413	0	1.42148776991649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156446730-1	4.02599350124782	-3.16478135945333	0.984544370359847	-3.21446290764591	0.00130688798503949	0.0444841101933385	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9498920872449	1.02186287315087
Merged-chr6-121109870-1	6.21029513533153	0.282514450992594	0.627384274640712	0.450305279255499	0.65249033289295	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31651078275156	3.2347640573605
Merged-chr13-90051882-1	1.85839805888818	0	1.47927416598637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10766939-1	2.48574818213855	0	1.45436483383581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-161514576-1	1.47467582178443	0	1.52688790132764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4993141-2	1.82633839353423	0	1.60727899945768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27315583-1	2.2744994303313	-1.73256175484503	1.38188949598984	-1.25376288036983	0.209928204909471	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr6-125366326-4	10.8612216693188	-0.723847258670002	0.696162174986231	-1.03976815270712	0.298447628511598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88511004002347	1.64773888520721
Merged-chr16-87623875-3	7.94693708411706	-0.293541150435231	0.667804035176995	-0.439561810011272	0.660254505667903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70810593662281	3.19916764696762
Merged-chr11-86894404-4	5.44355169752285	0	1.36158427411611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43248034-4	5.708330786697	0	1.41433299465494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59412912-4	4.42698051449863	0	1.37316567922423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79034672-3	11.1448875399077	-2.08914488824925	0.74282171898008	-2.81244454068699	0.00491665012384538	0.121649605863501	C57BL6J_F1_Control-BALBCJ_F1_Control	4.52418764160629	2.69466162684352
Merged-chr11-118490919-2	4.86376852147041	0	1.37453001063691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47396139-6	10.8663653253292	-0.342591414110364	0.518202248594283	-0.661115259610904	0.508538399944955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81564172833144	3.20195043319359
Merged-chr6-115268084-2	3.21868007513069	0	1.40335447160597	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155163396-2	3.80602773105748	0	1.37604334753505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101503992-2	5.77939583451296	-0.760204689723558	0.799474518042114	-0.950880450305375	0.34166506697237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55529857184098	1.69455469681693
Merged-chr1-151614730-2	2.93696524196369	0	1.405062398122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84555701-2	4.47026494614928	0.954766971431156	0.967033136254438	0.987315672686469	0.323487909748894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08764913775046	1.62518823153097
Merged-chr13-99126227-4	9.34921475717605	-0.990582696006263	0.652996111494639	-1.51698100274889	0.129271480466568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68653857923763	2.3843775015461
Merged-chr14-74989506-2	3.95458824986919	0	1.38289002530518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68898059-3	8.34765469415163	-2.08446410772128	0.727498568206194	-2.86524839885386	0.00416682246761603	0.108531050559243	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75036176337397	2.29350574780863
Merged-chr3-138198346-4	10.3697706788565	-0.327329477115754	0.633353213860316	-0.516819793367221	0.605281961532752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54334878169928	3.21712033583997
Merged-chr8-88692131-5	12.5171874893847	1.13059710293243	0.535723697776618	2.11041084727945	0.0348229829477585	0.466932049841441	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19381362772217	4.58186031908004
Merged-chr11-6586832-3	7.28400636514555	-1.72037586643199	0.813475470017298	-2.11484664238911	0.0344430200770792	0.463782048147126	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63079492276566	1.22903941979969
Merged-chr2-102685833-5	12.7393668010299	-1.26942579806278	0.547931570868285	-2.31675972978008	0.0205168238369551	0.326008192620007	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24432708825173	2.86381324246961
Merged-chr4-125059242-3	3.5427838234106	0	1.37862433888722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96413409-1	4.09251075669804	0.422870990777087	0.913601343405474	0.46286161226605	0.643463564879547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46681435340383	2.68568948218307
Merged-chr7-46838297-3	4.58348536818218	0	1.39133512175472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25074525-1	2.82023795349033	0	1.41500361267438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116490733-3	4.39719091504133	0	1.39434032744524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22143319-2	6.89394987702682	0	1.35315045461233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135292935-3	6.77825792257383	0	1.36993873791051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5956872-2	3.21677636629503	0	1.39357310712929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127924681-2	6.18885606195931	3.76050541445601	1.08843085885824	3.45497868224792	0.000550336334070088	0.0231033364636821	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.10751609739453
Merged-chr17-50571224-4	4.99821690267884	0	1.36630395869571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80097718-4	7.10641670442434	0	1.36048295188241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-143058996-2	4.02680072310563	0	1.37471810107614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120280331-3	6.66776686938063	0.320651507178993	0.751431897288642	0.426720649384177	0.669582808454007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11829389722409	3.01726097217335
Merged-chr1-161975244-1	4.54425152429125	0.624813860516774	1.36245461825506	0.458594254916904	0.646525562999129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr12-111309404-2	2.74800649240701	0	1.48718857018037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90186388-4	4.28447140365254	0	1.37183569825943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67870195-2	7.13309566633523	-0.144322048282818	0.844710985331912	-0.170853760385405	0.864338755819568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08885994231555	2.79882946923558
Merged-chr19-40682794-1	2.25256376890607	0	1.47140913890646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137838931-1	4.89083856853504	-3.39060108388905	1.38386998187675	-2.4500864447474	0.014282192163527	0.258272017237911	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34682751451015	0.601513806634888
Merged-chr5-32053707-2	3.92618083981457	1.39965512890572	1.1784985561258	1.18765960435874	0.234967544786171	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.54667940924561
Merged-chr11-118015567-2	3.0920590421339	0	1.44357296657262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-104206362-2	3.60977202596229	0	1.38557674371113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184536996-2	4.32162062901646	0	1.37143208731165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-72299887-2	2.74727620850393	0	1.53872402826219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70716039-1	3.41228929424356	-0.338892254691101	1.47076428737753	-0.23041914846557	0.817766083103817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.577068348605183
Merged-chr15-30616535-2	5.412772257353	0	1.41679589312316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25006900-7	15.810274906225	-0.128418055371852	0.555747422014745	-0.231072696489169	0.817258326194916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53806776684042	3.74829092969343
Merged-chr5-114620438-4	4.90557959382736	-1.30059913770081	1.3461162737479	-0.966186326593943	0.333950953635923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr4-9610275-3	8.7399836784308	0.263742505174274	0.640164824325193	0.411991560848863	0.680345608805819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68333779073552	2.48773900290245
Merged-chr5-143039014-4	5.32919714741743	0	1.37929935175108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73593053-3	5.06813235747933	0	1.3618073510126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141431228-2	3.51607883664347	0	1.46099166181162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128839324-2	3.09253051783657	0	1.38303333000315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-11215743-2	2.50812981771486	0	1.42389213568716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17531062-3	6.39978935383758	1.8477774850739	0.964243950708878	1.91629668375465	0.0553273427559517	0.632633366611439	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.57774662569158
Merged-chr7-24385111-3	7.44243442933883	-1.35614343965755	0.623114259679243	-2.17639609203558	0.0295256557644065	0.418946781962249	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00664719854652	2.1304360554358
Merged-chr7-80052369-1	4.99651038979168	1.6697592764322	0.766609954332208	2.17810800263705	0.0293979969488274	0.418227091374329	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03872093190566	3.68038748642034
Merged-chr5-90596350-2	4.36845316977068	-2.75212290125266	1.19814040804868	-2.29699531270698	0.0216190371273455	0.338476163365603	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42512484922428	0.465515277017237
Merged-chr8-106656278-2	2.33956864701351	0	1.56178067230322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43637426-2	5.64172551042142	0	1.35892476124677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84391002-2	3.51997251854183	-3.73781127928229	1.29307443185478	-2.89063892008195	0.0038445956809521	0.102144856608443	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31957511265084	0
Merged-chr16-3893011-2	3.62484270995968	0	1.38541998987212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67383819-4	8.68830731937395	2.96402326499947	0.85790605736926	3.45495085334699	0.000550393140426946	0.0231033364636821	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	3.38065723853827
Merged-chr19-5433201-6	18.1168088439279	-0.351714064334522	0.432573138754325	-0.81307421294662	0.416175510177044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.86447639012583	4.4502022728282
Merged-chr13-54080238-1	4.41620533613988	0.299646238042197	0.983758488313682	0.304593293579442	0.760675928408657	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4944959016211	1.92705437476988
Merged-chr18-61459534-3	3.48023005671703	0	1.38039865792699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38468355-3	4.05516772332903	0	1.3763554721702	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77835950-2	4.31064729261757	0	1.38385913664981	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33253318-4	4.44018275327915	0	1.37790012704273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4997770-2	2.6919467634318	0	1.40955957973903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126797852-3	4.69169464835657	0	1.44435523513172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-7535307-3	7.83548274960196	-0.842723998173349	0.623652814390606	-1.35127105775479	0.176608619643559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90803660717736	3.06278876624171
Merged-chr7-102231478-1	3.11254303061169	0.680964534435521	1.26485272477462	0.538374564166637	0.590318483105192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.27743081564928
Merged-chr9-3004788-3	6.66703581145364	0	1.39872781553453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118532681-1	3.84370075922786	-1.52148962754886	1.09176917503853	-1.39360009637126	0.16343839941092	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38047913892896	1.30281892590853
Merged-chr12-41378131-1	1.38621953697822	0	1.64933754214984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8953922-1	1.74484539302958	0	1.48003244696201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-7974986-1	4.61928082291189	-0.126755532767795	0.739464997280545	-0.171415189676254	0.86389731190968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18923496216865	2.17884592431967
Merged-chr9-111289259-1	6.46715927985241	-0.233815352866176	0.638875084518234	-0.365979764326689	0.714380175370229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63600110697839	2.9778550038892
Merged-chr14-54482699-3	8.81750561754169	-0.39187401661811	0.490181035090391	-0.799447527678926	0.424030961027064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14120598635862	3.09617187345855
Merged-chr11-77680274-1	2.1998989661839	0	1.40284850602516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62173400-2	3.32711092937989	0	1.43038404913464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69196562-1	1.78236795735388	0	1.45087369339911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46070340-1	1.66951641443211	0	1.57232125306745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171101384-1	4.31338993836586	-0.895490865545266	0.665793006291093	-1.34499890669285	0.178625587636205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19386702538097	2.70089346712193
Merged-chr7-100700024-3	3.73771600054202	0	1.4318904302483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39688825-2	2.00219665333027	0	1.53708065110118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65569934-1	2.76166050881793	0	1.41300147434622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11781802-1	3.80359151380562	3.46477370162472	1.15645218517142	2.99603714364648	0.00273513115397587	0.0790845714888162	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.16244562653257
Merged-chr17-43333595-1	3.90494431638135	-0.835252072755079	1.09978179179622	-0.759470723179462	0.447571020972782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19316068746724	1.38950137562363
Merged-chr15-52510353-1	2.07264613501734	0	1.47383207871318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-25499450-1	2.84090244299627	2.05299762481464	1.43110827140575	1.43455087629256	0.151415121469536	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.91692944157367
Merged-chr12-57185685-1	4.68115944270602	-1.62153952903105	1.06841843661579	-1.51770081220918	0.129089839232687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58707500045288	0.953310774576147
Merged-chr6-134266287-2	5.85295516357784	-1.29714695654537	0.938922231737522	-1.38152757778984	0.167116804444801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11180945331266	1.55424902326769
Merged-chr3-127201315-1	2.66803197625016	2.69233159798009	1.30044007252917	2.07032346576639	0.0384220635551389	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14046671619316
Merged-chr7-47150850-1	1.90601427615908	0	1.43884857462156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52064567-2	2.51658070956183	0	1.46302550279285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34118619-2	2.58159864646494	0	1.40407655675417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-23587991-1	2.14907930897369	0	1.46269558703936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58932050-2	3.7163666825409	0	1.40234806766148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27200895-1	1.77024926317152	0	1.51367252623986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125459914-1	3.36747277590865	2.81541114412198	1.08914353782122	2.58497713694751	0.00973854548468726	0.197381653244636	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.46354796742954
Merged-chr19-55644361-2	2.8092020922517	0	1.55441854653533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82908224-1	0.956322477904108	0	2.34467123656404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74192791-1	2.02415304802793	0	1.49069679071386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75366636-1	1.66479199345454	0	1.51974030081691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58723275-2	3.14723585147353	0	1.42409533887988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32167157-1	2.38654606096297	0	1.41096345176997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36642929-1	1.85346746116853	0	1.49272179064026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105647065-1	2.37189940551784	2.41148756752522	1.44657338816594	1.66703437741424	0.095507569333925	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	3.28433306174406
Merged-chr13-112751979-3	5.18497527480163	0	1.36340120246695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184015508-1	1.99475094848334	-3.90505577586036	1.44950333876222	-2.69406469887473	0.00705864614706796	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93837187257181	0.413263464506793
Merged-chr2-6295337-2	4.82931356181505	0	1.3675114120667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117883062-1	2.13877487894833	0	1.55641855494471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-118403694-1	2.30154647609738	0.946475839151251	1.2467109604895	0.759178245115962	0.447745937955519	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.44790810950236
Merged-chrX-169216395-3	3.30680786480758	0	1.41407946838113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62137953-1	2.04213501966922	0	1.53833112398961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-73540385-2	5.59275179042606	-0.375450954024086	0.925798010883074	-0.405543055407908	0.685078376831008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81579024618537	1.30172811853968
Merged-chr15-64079120-2	3.3032532446097	0	1.40413245105881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74521537-2	1.96190606677173	0	1.59240494144375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57363022-2	4.54325435337828	0	1.37356395094109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61413425-3	6.61601446146432	0	1.36242469573254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6568754-3	4.69202132131628	0	1.37317303177567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137757399-3	4.07462626794858	0	1.37337574223661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131237944-2	3.42462008324468	0	1.38505815877779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27817400-2	7.24856064727156	-0.0366646339308488	0.710095919785082	-0.0516333539023091	0.958820842205971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03635178011663	3.00215713277005
Merged-chr18-35745415-4	4.89510581817758	0	1.38035859126501	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20401018-4	4.22439679807246	0	1.37401122548649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46078086-1	2.37812092473026	0	1.46057279356618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55874351-3	8.13768999647343	-0.796053283821078	0.731386447764002	-1.08841678192804	0.276411155869889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25821626200969	2.09599654830876
Merged-chr13-44412381-2	11.2611802239741	-0.134640098329838	0.552448497480184	-0.243715204121208	0.807451397193431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00294160613826	3.43235080494302
Merged-chr6-124981951-4	9.46534994445749	0.438156659152326	0.643743626297338	0.680638442468938	0.496100295957918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17813337661218	2.66152500142419
Merged-chr19-23520807-2	5.82533664121828	3.68602341699099	1.13079164013853	3.25968400026323	0.00111536406620357	0.0390909576239585	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.24986710229783
Merged-chr15-13391132-1	4.0064963789601	0	1.3916832059894	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63611184-2	3.56941199843172	0	1.42679801136886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90924851-4	6.25068009814906	0	1.36492624934728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59004744-4	3.49136602475101	0	1.38813075162155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20446058-2	6.36808141562829	1.28285384705839	0.82508781310219	1.55480886602249	0.119991596956794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	2.61177357084289
Merged-chr1-173737528-1	6.0854396692592	1.45303953386406	1.09717401798981	1.32434737793578	0.185387702438629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.90973981249257
Merged-chr8-73677742-2	2.18250814182327	0	1.48432929537011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101132409-2	3.73398198455478	0	1.46624448171245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70603995-3	9.72420787502489	-1.24732967354822	0.626668772155903	-1.99041300439639	0.0465454585348969	0.562508799577248	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33497262370379	2.76251323127342
Merged-chr4-9779779-1	2.8584199055443	-1.92153220950343	1.35541561641281	-1.41767011257321	0.156287099800042	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr3-109438764-1	4.62093830740434	-1.0975125197123	0.866957249497636	-1.26593614661883	0.20553594389896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46588773797744	1.67735121185591
Merged-chr13-54301881-3	6.24747110069041	0	1.38946763363625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132333780-2	3.32083445232591	0	1.38844055155099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112665633-2	3.40509226065795	0	1.39131874430015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20539817-2	3.50742966646432	0	1.39441692662837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70568778-3	7.58172987272633	-1.77881562342091	1.30643329065756	-1.36158167136539	0.173329942803016	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr10-34111440-1	1.73790507082579	0	1.46717691524555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7968939-2	2.46013512477273	0	1.55845025361093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161963188-2	3.13466819570181	0	1.42017237112243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66788398-1	3.17027375114743	0	1.4334916090687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139007704-2	4.32913392176425	0	1.39065477143804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93292023-1	1.68264567226637	0	1.54783699329605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106351236-2	4.16137439837048	0	1.40090075517587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69103194-2	4.93064241873526	-0.708603932225915	0.876666096321562	-0.808293984675778	0.418921364534088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12463916324663	1.55805245852208
Merged-chr10-18139101-1	1.18155906206129	0	1.95636944014641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-25715180-1	0.868499479301294	0	1.74433073241295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89383658-2	2.51668452322575	0	1.42169927677775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-3890085-3	4.28167806723918	0	1.37816082303823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34184687-1	3.8898215259647	-1.9010165388026	1.22840691592511	-1.54754626838855	0.121731576542546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.413263464506793
Merged-chr18-39612172-3	3.63826616263709	0	1.40941833738059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127154974-5	6.99575623007397	0	1.35127380985795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90412822-3	7.8862910790415	1.71685289074607	0.845673980728875	2.03015929290663	0.0423403501290637	0.526797686579486	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	2.37426628469346
Merged-chr3-103871954-4	8.324047258101	1.35632949098305	0.658075164366805	2.06105558213568	0.0392977377206555	0.501551564034269	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96144955975915	3.47301738761874
Merged-chr1-88252961-4	9.33889165835893	0	1.3768570001696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74646339-2	2.93020979874386	0	1.41838125767981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27213110-1	2.95263169762343	0	1.41735281173733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128039624-5	11.9993077393765	-0.628093040609581	0.503137538164776	-1.24835257353404	0.211901969001346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18809046204171	3.74218776955638
Merged-chr3-65991189-1	4.66115961784726	0.110271649003825	0.928535892129782	0.118758628436963	0.905466586376397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60308582214967	1.38647389072186
Merged-chr1-160915558-1	3.84545869516394	0	1.44413948183617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89774000-4	4.42267754478606	0	1.3833083258993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125795317-3	5.86937392507217	0.471509497324561	0.826538037146903	0.570463156120616	0.568363604563269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.84097322471749
Merged-chr6-17615975-3	5.76790927476364	-0.0393776556807929	0.817235313089967	-0.0481839869742118	0.961569611907318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58458601743443	1.5645819449897
Merged-chr3-37762451-1	2.36997074848048	0	1.47611594904625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115060255-3	3.92309215559819	0	1.38018787528716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36711002-2	3.89018407755474	0	1.38974912311135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92445587-4	4.45799975048363	0	1.36381766027288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70241644-2	3.10915636481288	0	1.47908731795331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22102587-2	3.24583297335692	0	1.43091048805922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-106802612-4	4.12770094802922	0	1.3798706631454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124712977-2	3.38677206353193	0	1.38649666657929	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83583110-3	4.03001996876863	0	1.38092851734902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127104736-3	4.66643866041101	0	1.35776304461773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119373434-3	5.50951371476528	0	1.36765347072784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-134689672-3	5.39074616661976	0.476207019816398	0.817651744772143	0.582408125294349	0.56029180982525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65326585997348	1.91330184091288
Merged-chr13-100854405-4	4.88001339083683	0	1.36126050421661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99560803-2	3.10543475725675	0	1.40337487043109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84654259-4	6.44104595986301	0	1.36453884114215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87215363-4	10.6154347074727	-0.128036320610922	0.514412696525414	-0.248898056902056	0.80343963837815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3556112735648	4.06523936306185
Merged-chr13-59835327-3	8.59204150559839	-0.641157733000834	0.551256543214265	-1.16308412279766	0.244795373238981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68768008848678	2.82207556472234
Merged-chr16-84814704-5	10.4061693774923	0.714413113381596	0.536030883782951	1.33278349251025	0.182602864440156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78603968057466	3.77367701506594
Merged-chr1-136582775-2	3.61233002759884	0	1.36921205631016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95720002-4	10.8181395794998	0.724912911821402	0.521089602272294	1.39114829514982	0.164180462420256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31433370529175	3.95332576706102
Merged-chr13-91681693-2	4.23655743053939	0	1.39793863317845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116697589-1	2.68734008721982	0	1.39256521633212	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-130952691-1	1.71153527311824	0	1.50889747718213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14203973-1	1.64289823482818	0	1.4667853828692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-35726795-1	3.74458943756993	-1.4041936816187	1.67082045504021	-0.840421648767102	0.400672015145558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05120729760743	1.87547555837002
Merged-chr2-140795115-1	1.49162880835117	0	1.54102039423786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135306711-1	3.78655137857278	0	1.42351152230044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84190262-1	2.60917297568541	0	1.50650014377965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43786443-1	8.11221966640225	0.35253440359772	0.666721844951428	0.528757841470461	0.596973446657983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90012233499004	2.40488797121464
Merged-chr11-23681221-1	1.41863253558526	0	1.59989411615893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-21999132-2	2.67178129433464	0	1.52463422175508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96622476-1	1.96772986519229	0	1.52296420968703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173965574-1	2.91248627076839	-1.51052252765262	1.09062466136436	-1.38500675912002	0.166050400600773	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30944904015933	0.724326877898254
Merged-chr6-146777176-1	1.92156075903657	1.41757983134281	1.63405252479101	0.867524029880319	0.38565495130368	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.39949824061849
Merged-chr7-80215582-1	2.9199471801129	0	1.40471054454692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44113899-1	2.53215388604817	0	1.4318474229082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70129293-1	3.22384874178683	-1.02789999569985	1.09261527669522	-0.940770294562313	0.346822586842314	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.577068348605183
Merged-chr10-67210112-2	2.53870840444976	0	1.43866105095797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17777565-2	4.70078093790279	-0.0333055280454011	1.01788598794602	-0.0327202932743066	0.973897640862055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.25298535761957
Merged-chr5-106574415-1	4.9435337878328	2.33543482688364	1.11762905288603	2.08963324714304	0.0366507575744359	0.480648157415959	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.70089346712193
Merged-chr1-177521307-1	3.09612649413313	0	1.40863789152593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26534592-1	6.74790832303015	-0.244132443570106	0.526998523673312	-0.46325071627989	0.643184667239652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00685254775269	3.83497715068542
Merged-chr7-72669291-1	1.45061034589877	0	1.56332798225164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147073146-2	5.87078324395547	-0.941507356247588	0.663744223679789	-1.41847917112993	0.156050915572412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73151481978811	2.85061433383478
Merged-chr12-25382732-1	3.27800981131828	2.64859089983358	1.28290755671689	2.06452201950672	0.0389682483448606	0.499004714199829	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr6-128411255-2	3.52543506599708	0	1.38216322896358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77381782-1	3.14641624670003	0	1.44558514103527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34424125-1	3.13656205107365	0	1.57417846301244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80351985-1	3.55465389638253	0.852144336721587	1.06188190219212	0.802485036200769	0.422272440877305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	2.02497645810754
Merged-chr16-10656671-1	0.943533753692168	0	1.89645735248507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149950902-1	2.08357835786059	0	1.48200365164488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20472152-1	1.15446958812732	0	1.84366404142416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16865574-1	5.87164176495856	0.502969560491491	0.742121932125649	0.677745177333383	0.497933276532531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0818020120308	4.14554141161635
Merged-chr18-75901180-1	3.22423578499259	4.66220258879012	1.24391083733284	3.74801991337795	0.000178236106465514	0.009443212974034	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	3.86336954023592
Merged-chr2-16172223-1	1.70042222994478	0	1.63128334570736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156660528-1	6.09549907370719	1.29436516949766	0.659638294727262	1.96223472749234	0.0497351625436891	0.58772906537226	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6847444908354	3.97307414132343
Merged-chr14-44086775-1	2.34866836151863	0	1.43351523208125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114822007-2	2.87635730058308	0	1.42890494086593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74921314-1	1.94715174219967	0	1.51423619216807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-138153216-1	1.92014608470404	0	1.56032094841581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5733671-1	2.16668382831673	0	1.40878928223483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102220215-1	4.23435297805203	-1.24855693884333	0.982329153443272	-1.2710168831566	0.203722642417208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48834673140933	1.19182800327718
Merged-chr4-129702253-5	12.5786568505683	-0.223313326977134	0.58445351633966	-0.382089115274232	0.702395265187943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36917825153706	4.05681629641496
Merged-chr8-25063258-2	4.96172303971917	1.37889334612463	1.19402966365074	1.15482335833154	0.248162769659805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.25298535761957
Merged-chr12-54879759-2	6.23809565354945	0.600881727654836	0.820030037541916	0.732755753016087	0.463707412602235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41037501137447	2.82232446221479
Merged-chr5-107868467-4	5.94796154260733	0	1.37481556292472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-38028037-2	7.58168664334159	0.373361927215827	0.713887735837716	0.522998096861411	0.600975577633473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	2.08960676835909
Merged-chr11-61749415-3	4.03067571852706	0	1.41196936491903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98278460-3	4.55741222504576	0	1.39423182278973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122801588-2	3.96481781708445	0	1.36700424141324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32638664-2	4.02823081658365	0	1.36993174480643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129058211-4	4.67024351587345	0	1.3692727056334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94607585-2	2.91592634463191	0	1.45221100759565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38505220-1	5.92567179130924	2.84063073485419	1.13931645363284	2.49327632002199	0.0126570304088418	0.237905780080993	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.49873523349828
Merged-chr6-133985649-3	6.08345509362165	-0.0349594483721704	1.32158280743258	-0.0264527112304719	0.978896251356904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.601513806634888
Merged-chr1-89466494-1	2.87331480609265	0	1.38899330595405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135144414-2	3.86645921887007	0	1.38928704477457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121260212-1	3.09872930609118	-2.5697164370693	1.12442396738118	-2.28536256039994	0.0222915774177036	0.346537341201967	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22737944647028	0.71701424649985
Merged-chr13-37432955-1	2.78541540033081	0	1.42046759595604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70055364-2	4.41204467831521	0	1.39787400713714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81305031-4	5.50530598492119	0	1.36651680334629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99009012-2	4.2435845370717	0	1.37112064027388	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155879219-2	3.99804809088634	-1.55541816174124	1.27388648731618	-1.22100216716969	0.222085199250045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.601513806634888
Merged-chr9-82980534-2	2.85801582465095	0	1.40852762995942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97270510-2	3.13599596227201	0	1.39052197802234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37855200-1	1.73568014162909	0	1.53074724867521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23493417-2	4.18790571672013	1.62381270880811	1.20977769954574	1.34224056983183	0.179518006046668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	1.81350735141944
Merged-chr9-99385221-1	3.8873527295521	0	1.37190475056166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43514039-1	7.60437716254993	0.572334784785625	0.512495942515286	1.11675964101619	0.26409710941982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83987752656571	4.4319198547547
Merged-chr2-73492133-2	4.10754896382089	0	1.38390558697026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83145651-2	5.5469165432111	-1.04157933745716	0.578821752634856	-1.79948202139222	0.0719424653486564	0.744336981522981	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72071179817798	2.94618609376715
Merged-chr17-40824774-1	2.79963491602457	0	1.39391006947251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27650354-2	4.16618634383402	0	1.37203922507418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46563162-3	3.80769330641422	-1.78165972729253	1.36470820404439	-1.30552430329977	0.191714377105058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0
Merged-chr5-147051055-3	12.2880599143171	-0.268604239534395	0.472557181401627	-0.568405793215759	0.56975945761801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43814987583919	4.03790734587426
Merged-chr7-90023667-7	14.2925634444428	0.0503208901207542	0.447731067464025	0.112390883227681	0.910513483658889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00300165362213	4.01828099104034
Merged-chr16-44989257-2	5.65181697608382	0	1.39920225276788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136929205-6	15.0030787011016	1.0985570695203	0.434068383932986	2.53083871155634	0.0113790159857331	0.21957824990006	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08830518476356	5.13791548362357
Merged-chr2-170401621-2	3.25966311993324	0	1.41341102276169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120795672-4	5.79377442870518	0	1.37024866381082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161809125-1	3.36557445694095	-0.745849004262137	0.913440096445022	-0.816527550262873	0.414198473010389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27471430455995	1.78042541828092
Merged-chr9-70290916-1	3.65229585618891	-0.536057320507516	1.30426572306341	-0.411003149916755	0.681070224988345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.601513806634888
Merged-chr11-70589672-1	5.33569022292307	1.51997578995642	0.959757140179177	1.58370875956459	0.113260010516962	0.982086602598748	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31345086927531	2.27435083006356
Merged-chr14-64185577-2	3.72404926815246	0	1.3861944502357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26345233-4	10.8435058557909	-0.35856314407018	0.554700221835197	-0.646408870874241	0.518014596947412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3318823645705	3.79230492023675
Merged-chr4-56685379-5	9.92783918100972	-0.587614077213863	0.476384215247964	-1.23348771517965	0.217393857268949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81863386094158	3.58824854842185
Merged-chr9-99195222-3	5.5855228521556	0	1.35940277018574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-39510138-4	4.74277162814472	0	1.37995795516813	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69384638-3	7.78296690305267	1.25624007194683	0.692462770349411	1.81416261745443	0.0696526935479891	0.729809323164059	C57BL6J_F1_Control-BALBCJ_F1_Control	2.311378010734	3.84224848677301
Merged-chr12-103493007-2	3.29528829234657	0	1.38330525525584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43873342-2	6.66931333605946	1.1285929421949	0.870099011208569	1.29708565077816	0.194601718150449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.78512879763309
Merged-chr6-97291556-6	10.5216305209009	-0.196362779998517	0.529156787836675	-0.371086196968761	0.710573331456147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89125881698478	3.75964297815181
Merged-chr5-3461059-2	3.75205745562801	0	1.39012084661893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103383018-3	4.81613055945952	0	1.38051569053978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124277598-1	5.21963138326062	-1.67612594457828	0.947845754365728	-1.76835306468182	0.0770018978557084	0.77600040147172	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43884655774859	0.730937814817307
Merged-chr17-28015171-1	2.19747117931558	0	1.40992211196587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97343058-1	2.4381580605287	0	1.40384393133594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123342491-3	3.66989766851346	0	1.39723223711959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32507592-2	5.78390010098903	-1.07207416892333	0.73757939079309	-1.45350342255439	0.146084030112589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56805956097596	2.30422205395754
Merged-chr10-8766740-1	4.39202671781342	0.272136947610316	1.03466931676173	0.263018283428023	0.792536486980209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.44327150962309
Merged-chr14-70977393-1	4.95861873352229	-0.670529692990097	0.830653954557967	-0.807231084991247	0.419533359757987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66658412415176	2.1784061121428
Merged-chr16-35921865-1	2.27009478018633	0	1.41014510270158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14535898-1	2.24078052480538	0	1.55216875398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-29876463-1	3.49404695050081	0.979222466439311	1.18084048554057	0.829258886725112	0.406957929784759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22258626807024	3.18017744409759
Merged-chr2-165453133-2	2.18134311939349	0	1.48229510586081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140815224-1	1.23564912804435	0	1.83072302832808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37648656-1	1.87098414687023	0	1.46238965620232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73160812-1	1.94667596181348	0	1.43103846894706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103914486-1	2.56580325452491	0	1.42802008380501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30932062-2	2.76627803314469	0	1.41999177460045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106708478-1	2.71384438376347	0	1.42754806204661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115260763-1	2.0465466558371	-1.78431714641759	1.58448255060124	-1.12611978323177	0.260114821301531	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68418793172922	1.30139522650344
Merged-chrX-120440355-1	2.58088379942708	-4.19731653924127	1.48761505417937	-2.82150716843658	0.00477985692419096	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49420006741644	0.465515277017237
Merged-chr17-87275890-1	4.63887823406589	-0.235924362133088	0.941476524432484	-0.250589744949085	0.802131311141927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	1.70133746420996
Merged-chr17-63857285-1	1.23117157068411	0	1.63751360419189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-103762403-1	2.28611035916139	0	1.52745566257328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101998731-2	2.79479687032479	0	1.37762675053521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137740574-1	3.46888914865445	0.457370842289487	1.26857368519642	0.360539437028184	0.718443770299345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.67591700901439
Merged-chr1-55383379-1	2.4773648234294	0	1.42157571794412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76021805-1	4.89800346448397	0.119273356260496	0.918789426932718	0.12981576927662	0.896712186411997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29061620323927	2.92111485907742
Merged-chr10-121756860-1	3.31925120968253	2.06840481109991	1.12608962394118	1.83680301027971	0.0662389813774225	0.708651205663162	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.55698491486525
Merged-chr5-34233079-2	2.87899042822369	0	1.40719802951267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161311535-1	3.84601042862216	0.838651163268696	0.857632244593119	0.977868041408088	0.328139593224926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96739710961373	2.50656502262891
Merged-chr10-40529875-1	2.1704266022287	0	1.41498827361157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55812742-1	5.73240538980052	0.469029329888756	0.793352549056321	0.591199121306988	0.554387011432862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60666171676197	2.97139815977867
Merged-chr1-181861277-1	2.05220538646209	0	1.52350004914769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62197613-3	6.03819718711065	0	1.38659719237067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44824572-1	4.27634778986642	-0.196982122092813	0.981153291233129	-0.200765898512396	0.840881629019979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58458601743443	1.41437199749648
Merged-chr6-97214139-1	2.41945419222908	0	1.48624232206171	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40239200-1	1.79263669494264	0	1.56902076816423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38066409-2	4.11205744054545	0	1.38379848997025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140847404-1	1.48392671084489	0	1.53107017912584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167696614-1	2.42277141482734	0	1.47857227066527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69505297-1	2.53776325006241	0	1.40940062224881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95710298-1	2.1700881103334	0	1.59380096030062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8370147-4	6.00669337958692	0	1.37855400687536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7185955-1	1.48829091142923	0	1.51607306070051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95820735-1	1.8530114429132	0	1.46101252900419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104129970-1	2.02487776834412	0	1.4990295219854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111748113-1	1.97339831668322	0	1.5012053762597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37389781-1	1.44850197244036	0	1.52974321060621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-118569657-1	1.95348114999499	0	1.52661174187239	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87690575-1	2.35436966616068	0	1.41242429588369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157798509-2	1.96336042589296	0	1.51343507336888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123565861-2	3.50799999190307	0	1.40705274123796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83205364-1	3.03399263371291	0	1.39313499831781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21143655-1	2.82020481540963	0	1.4385257987263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6501493-4	10.1663511750004	0.894005549416797	1.01959002191251	0.876828460658973	0.380579817969995	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.55412587431917
Merged-chr19-5613176-2	5.29059791732655	-0.342387004677512	0.778272533398331	-0.439932016079865	0.659986346755442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09093093088911	1.90216338684418
Merged-chr2-26498801-2	4.22386160896556	0	1.38448761271476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136116356-2	3.27980503413348	0	1.38622460494634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34290306-2	2.82675609861617	0	1.42004197397601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70971241-4	5.20695716815239	0	1.36551060612061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116151499-4	7.33840233211119	-1.08094434160041	0.758501189564582	-1.42510566426524	0.154126659567352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5105281013973	1.76574380159459
Merged-chr2-154712396-3	3.32197192980169	0	1.38423535527455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131492615-3	3.73635298953754	0	1.39098760311743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13132152-2	2.82569817914429	0	1.45731130819006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77921469-2	2.18364791407517	0	1.57459581844116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11548042-2	2.84523662449764	0	1.45230147492488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52594597-2	3.31751940771844	0	1.40894075124421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4106150-2	5.70935179823596	-0.448885581703226	0.842262998230622	-0.532951800858187	0.594066945666066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40172972476452	2.23558145226682
Merged-chr1-33739436-2	4.96778881823266	-0.429614724110055	1.157800508314	-0.371061094743914	0.710592027600225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	0.723581231604105
Merged-chr9-35057099-1	5.99831935011713	0.410879777029008	0.886200180075554	0.463642172803416	0.64290413411846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.90221032624646
Merged-chr17-73393583-2	4.04405970008641	0	1.53651789015735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127764786-2	6.52014465647665	1.56095810766405	0.80927691549638	1.92883063605814	0.0537518912060104	0.619702874669675	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	2.96926963653869
Merged-chr8-88691561-3	8.37896935882758	-0.457527396369174	0.725423700030386	-0.63070367889829	0.528234293158753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89961628724531	2.54358964719623
Merged-chr14-47515769-4	11.3017749244935	1.75850963532109	0.585191454533921	3.00501591692186	0.00265566951737683	0.077321660040218	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95139221855044	4.70068085980501
Merged-chr1-151353153-1	2.6377683436306	0	1.38146523668085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12513201-1	2.6336938475235	-1.84352079537382	1.41640240121676	-1.30155158858114	0.193069718247292	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr17-48119853-1	3.61293259621458	0	1.37739680262778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53870864-2	7.21990260883335	-1.36599402756643	0.815223721216361	-1.6756063299143	0.0938153281211863	0.874585392100766	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10287621859297	1.71450075940727
Merged-chr4-43498864-2	4.19547570925307	0	1.36413614070635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133005434-3	5.21178164327993	0	1.36701217778479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83570380-2	3.47231937347309	0	1.37961838668365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107572720-3	4.46846148527048	0	1.36232718454534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20157797-3	4.54216906831862	0	1.3768816348149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61331447-6	11.2271831586124	0.326619952047707	0.609557258495184	0.535831453888409	0.5920750415847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66722862650681	2.9308871479563
Merged-chr19-57482976-4	11.4965702051008	-0.66630196492507	0.541716870379173	-1.2299819358749	0.218703869414566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34159730236544	3.61737249842149
Merged-chr10-66853717-1	4.53643126100197	0	1.36604329655845	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55433217-1	2.96616877872074	0	1.38955733814401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78740525-3	7.56023133189182	-1.83530305712016	0.789493530213265	-2.32465876778546	0.0200902136863239	0.32122047660586	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50380979740782	2.4896710052811
Merged-chr2-140718407-2	3.00492231494659	0	1.41556807726788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84169693-2	5.13430016376057	-2.10722033640766	1.08025371294713	-1.95067169050388	0.0510961130602151	0.598090785925977	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33904733505278	0.465515277017237
Merged-chr14-121372672-1	5.19431509680496	-2.93287701153131	1.19827063027567	-2.44759150181005	0.0143814603281751	0.259635271331541	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17727924666045	0.303163067301871
Merged-chr1-171492060-1	3.2918918856985	-3.55252612094883	1.16666199964856	-3.04503457044027	0.00232653565846872	0.0698719071042546	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14242223062423	0
Merged-chr16-23235517-2	2.43575917118696	0	1.42286601356088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68364646-1	3.35402641038669	0	1.40356728276613	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155177873-1	5.26025490265122	-2.38999547415098	0.85532790659746	-2.7942447051196	0.00520210975015348	0.127092801756671	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9172860580229	1.30139522650344
Merged-chr7-30283972-1	6.15756879239012	0.328330303860801	0.802142315565282	0.409316772709368	0.682307208192699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.947269414042	4.05475445161691
Merged-chr16-11317552-2	3.70820004968989	0	1.40099280361327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50889668-1	2.30530612098419	0	1.42021396258748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74699472-2	1.93585007607348	0	1.88958007061348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20125203-2	8.09725321478551	0.556019661019012	0.621085344984091	0.895238738942157	0.370659480372127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80018199085412	3.18555860574244
Merged-chr1-162229006-1	4.67294056935829	-0.968415139140958	0.825284860903226	-1.17343136293701	0.240622866344517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13406065291507	1.90482497882743
Merged-chr17-47428937-2	3.99202148597708	0	1.38738270417484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138980980-3	5.63960102395625	3.73199425921744	1.10744182766006	3.36992351743012	0.00075189049670385	0.0288237062837268	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.55491375810168
Merged-chr18-76202798-1	3.50626869998149	1.19912259204283	1.4200067608323	0.844448509062023	0.398418825101864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr4-117139441-3	5.03378422718883	0	1.37059987289581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91239315-4	3.4962099010001	0	1.3795356989683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74057463-2	2.82096283314615	0	1.38742490831932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58953926-3	3.9081926143009	0	1.38543915593418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6162841-1	1.78786280991437	0	1.45220436906989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4161496-1	3.89343271524805	0	1.4053234350389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126778048-1	3.59459957225778	0.171172013086767	1.1029514751868	0.155194509402851	0.876667976708387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0.730937814817307
Merged-chr16-87579113-3	7.77864993474625	0.274056438373879	0.838828960021962	0.326713133946524	0.743884865484195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61584026570355	3.57147381102513
Merged-chr11-79703662-3	8.44837423280665	0.914575703885737	0.631573549117222	1.44809057498383	0.147591721107136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66613800347615	2.95842953886316
Merged-chr4-59464447-2	4.41281978283077	0	1.40641139328482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55976470-2	3.70042841438063	0	1.39966698232127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97432184-2	2.65390874678273	0	1.41582777631745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56259985-4	4.83003536981658	0	1.36609910362192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62697639-3	3.8037909068806	0	1.39070900780667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85111909-1	5.17251663935121	3.67736597995786	1.17975686435254	3.1170541075648	0.00182668042710963	0.058102118980253	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.37057512210999
Merged-chr12-84337483-2	2.66257583637717	0	1.40754549793765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108315344-2	3.88401493016337	0	1.37667700080004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121928542-5	10.9170641111025	0.352383741839769	0.527420804995061	0.668126358502428	0.504052937751704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33629207244909	4.49683024476824
Merged-chr4-3875149-3	5.96471040269042	0	1.37144965103479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116176589-3	5.09731516478647	0	1.37827530240517	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45333845-3	6.04505297852927	0.892465929949594	1.09588752080172	0.814377308810571	0.415428833724164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.897114879832661
Merged-chr9-94361321-1	1.45154019110977	0	1.66323545397844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66881907-2	3.74004621578712	0	1.45321141509277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173460369-1	2.55739307922248	-2.49730068197335	1.20241957154097	-2.07689623578974	0.0378111372611006	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1819016518161	0.977756232605852
Merged-chr11-95520114-1	4.07516722900584	1.37027462156997	0.971451315925866	1.41054379062114	0.158379175588977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03464639206371	4.05762011416876
Merged-chr10-67265036-1	1.28239794538455	0	1.55832588763782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131002756-1	1.7707347257941	0	1.75788840622308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-19733113-2	3.22752435708989	0	1.3986800077905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130946306-1	2.29499600685448	0	1.44484754125342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73351236-1	2.61310777538931	0	1.40711959757899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59875394-1	5.40340531095501	-0.843146103976612	0.931566257944792	-0.90508441754508	0.365420666638284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03996640867281	0.838451940269823
Merged-chr17-84347637-1	1.56096884624475	0	1.52680737408674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121992185-2	5.92479994781353	1.24026743399104	1.01248790711309	1.22497012090487	0.220586478444206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36466117824571	4.06108099967416
Merged-chr5-139558562-1	2.3649463812326	0	1.45670132067179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31413107-1	2.49179740460178	0	1.42899737985657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81774189-1	5.75598534654443	1.18071863954906	0.868983221840184	1.35873583042114	0.174230313811471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43393032742955	3.15787203037583
Merged-chr4-12483182-2	2.96353443191373	0	1.47337978361666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121437748-1	3.102221778207	0	1.59031746294229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65608902-1	2.91331856328159	0	1.4560806277705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83675062-1	2.25220631187799	-1.91695441854503	1.48246563143672	-1.29308523441938	0.195981581390059	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr6-54282527-1	1.28284351681823	0	1.56862757417933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62844975-2	3.27328090198549	0	1.38783276375621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117398456-1	3.58793718683065	0.116190178553215	1.34812279946545	0.0861866430856937	0.931318048470251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43227213747251	2.27972262566774
Merged-chr8-108981648-2	4.61182333845268	1.13274039012863	1.05371351673193	1.07499844325979	0.28237542530299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.38572824442771
Merged-chr8-84289099-2	3.15374704564311	-0.677750867361502	1.52826501662024	-0.44347731577364	0.65742052341862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr6-52060768-1	2.04072271929814	0	1.48346567521159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52431314-2	2.39130731808913	0	1.45791126461937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117661105-1	1.56142870111028	0	1.5493227978363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54944836-1	2.23441138173355	0	1.48983321480797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55647138-2	2.47480612546407	0	1.43540428000594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-72380310-1	2.67803078915033	0	1.4027533972393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43544215-1	1.50427188716812	0	1.49540699608172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105821594-1	1.71840427947021	-1.28323225249012	1.50272168508613	-0.85393873344988	0.393138936736056	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0
Merged-chr4-7392649-1	1.96830186520668	0	1.57093813778766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88468737-1	1.73134444497206	0	1.69716365147321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92483444-1	5.0831337150991	0	1.39471584091666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120819556-1	1.62414524977864	0	1.49697498898295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148601103-2	6.20666914880769	-0.245230825909349	0.750879936319629	-0.326591261861818	0.743977053470923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15293271650622	2.44598318426397
Merged-chr3-149323455-2	2.6572424535694	0	1.50982459213965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102649190-1	4.42770806914144	-3.1342012877945	1.01792026611725	-3.07902435202472	0.00207679705145025	0.0642896417538633	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27620127671797	0.601513806634888
Merged-chr4-123083045-1	3.07442560305403	0	1.42129859991931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142744212-1	1.97835337304743	0	1.51875618150991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95803380-1	1.84747606732337	0	1.60218070940631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88450714-1	2.19803234113819	0	1.60455207419361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-178058445-1	2.41230715024186	0	1.50415331119033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56615263-2	4.02999077368843	0	1.38041516414543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55364101-3	9.97397318789472	0.299398393366052	0.574885525437844	0.520796541429747	0.602508512665689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62200326657944	3.74617058744558
Merged-chr4-6514969-4	4.58012299492221	0	1.3694339277043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60660014-3	4.72329048442753	0	1.37144439922509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88989664-2	7.06374153701903	0.0539703241020622	0.897034514981268	0.0601652703443516	0.952024005835385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67453645373796	1.93902124413904
Merged-chr4-34429703-2	4.17709612107489	0	1.37638891687726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35220242-2	4.90591150081215	0	1.36779932394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111226682-2	3.31730447419575	0	1.39025602898536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63309175-4	4.45542746039206	0	1.37610582355932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4843664-4	8.85793336166733	-0.177865024264168	0.612133348513962	-0.290565813308424	0.771383409467306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81289813690589	3.27432355762681
Merged-chr3-50390543-1	3.87979591758465	-0.0352838457883398	1.46200033031872	-0.0241339519948316	0.98074576142794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.41385117919798
Merged-chr6-136653428-3	7.5495292642472	0.370792271032002	0.680481327411588	0.544897054622234	0.585824322123997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22855085816634	2.93722970784884
Merged-chr14-106194275-3	2.8954793164065	0	1.40802253853804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37602704-3	10.9883821285965	0.200123346657982	0.609601245000995	0.32828565935369	0.742695686078025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59719856194818	2.80307167987918
Merged-chr7-24564862-2	3.50068161327287	0	1.38153180968915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124672374-2	2.8309003442362	0	1.43102293684393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94949961-1	3.01439716109147	0	1.382217816238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33969131-1	7.78820320069423	-1.11628366140227	0.646023146144457	-1.72793137221845	0.084000528980067	0.817667284292425	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80425001585269	2.65063560637399
Merged-chr15-8722647-2	2.8996881048203	0	1.43046949208424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45306943-2	2.93613776070769	0	1.37948308521743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75324590-3	9.83273101096615	0.969621896757998	0.463748420867023	2.09083600747404	0.0365427671109834	0.480277629928903	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48910686631238	4.49077900477481
Merged-chr4-141274802-3	5.6364301432249	0	1.36129643846105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100855436-3	4.2425977972171	0	1.41604153633254	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59633257-2	3.86543625760539	0	1.37346539590393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99216917-2	4.22160286010664	0	1.38344906912896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-31211463-3	9.26202826584923	1.02485406563708	0.641657030521987	1.59719915295459	0.110221321483115	0.966530216889924	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82422868307434	3.86142736642932
Merged-chr15-64163372-6	10.4243381726226	0.441587128294941	0.656036366314799	0.67311379516276	0.500874898192832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51142487429322	3.69259408624652
Merged-chr3-51797027-2	3.38981722431559	0	1.39393820464095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-53796854-1	4.43559514636459	3.26755616125639	1.56745617613819	2.0846236156387	0.037103479122163	0.484322985663925	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.54895215795934
Merged-chr2-18892976-2	3.64547249117695	0	1.39424954146562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119978357-4	4.59846480630281	0	1.37324505478172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-33921136-1	4.33171530728288	1.2156975161576	1.04983731271381	1.1579865770012	0.246869514216497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.85774282263707
Merged-chr18-56716429-1	2.38778612550912	0	1.45418365692151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103247746-2	3.80602170610271	0	1.46976142331019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87724463-1	2.46880654303835	-2.77210083913758	1.38307941490462	-2.00429621702434	0.0450383388735479	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0
Merged-chr11-118244057-2	3.67094189717431	0	1.39900403629387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69471892-2	3.59437049566108	-3.06976068426649	1.22500442233196	-2.50591804266535	0.0122133925920842	0.231407392092403	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	0
Merged-chr1-105932636-2	3.94999128191952	0	1.40685829040457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146909826-1	3.50105255397559	2.8354117039579	1.19025789750973	2.38218264284587	0.0172103591536571	0.291491092300668	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.92385917873864
Merged-chr11-98075550-2	3.44291922418252	0	1.42309947506533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40806574-2	3.40457665749826	0	1.38706664362426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97298002-2	4.6606648388502	0	1.38594670674068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55519787-1	2.04218175653838	0	1.39494770820806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26570328-2	9.59617690223773	0.685802057897965	0.657082034921545	1.043708428248	0.296620309220451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2886417368088	4.62808459274905
Merged-chr10-118476625-1	3.35131853244961	-0.497626590977132	1.30257639152386	-0.382032558102	0.70243721506198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57597341069752	0.765562747387088
Merged-chr15-30611501-8	21.1264096618693	0.510587024943677	0.401396039692514	1.27202805821106	0.203363150270908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74736480881053	5.22172487909282
Merged-chr11-8621848-3	3.83898160934003	0	1.37227216794354	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118609321-3	7.44107687496875	-0.620351825181047	0.601121831229343	-1.03199017728632	0.302076719080393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5057140949869	3.07684945247441
Merged-chr8-3337143-5	11.0556859201222	-0.516267800555844	0.501187510519191	-1.03008911778554	0.30296817315495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21660792566273	3.54504092673625
Merged-chr10-78028285-3	3.51964663438251	0	1.38585135176448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21380862-3	4.12486112090852	0	1.38866021635235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89146510-1	2.57405021770006	0	1.38878833386175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119602066-1	3.6589563504207	0	1.44905463385993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104714426-3	3.7517026269709	0	1.38332119919088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63790403-4	9.94323514729348	0.125340064166709	0.586319126239892	0.213774476317231	0.830722929793731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58981628343739	3.9952178824801
Merged-chr8-83858149-3	7.4261015697069	1.2255756550579	0.757246043520365	1.61846425682241	0.105562583788442	0.943468953980045	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7913447488181	2.72151558165605
Merged-chr17-81501164-2	3.45604362325504	0	1.40173843278538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62360821-4	8.87228342209769	-0.0595185596981282	0.606439528266446	-0.0981442615857621	0.921817741491773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42497807257935	3.22306252865443
Merged-chr3-137823510-2	3.09626515475823	0	1.3889396645113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46467248-4	5.10351622173243	0	1.3666603310368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25084793-2	3.45791533377872	0	1.3913783212073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152838216-3	4.11913997357883	0	1.42103653853309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-23384499-3	5.16710116167059	0	1.3996637112707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59426960-3	4.032025474381	0	1.37072125870267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40473883-3	2.9778677484557	0	1.4735703058783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65656954-1	3.13203046006464	0	1.4152946891882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28429554-1	3.21623026188354	-1.8771713931092	1.39022191558309	-1.35026744440428	0.17693021111383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.388633508238	1.02186287315087
Merged-chr6-22343375-2	3.01638657826051	0	1.39231891624788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31649842-1	2.05270854301575	0	1.49775435808753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73537473-1	5.47304084962046	0	1.37238708293587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97519360-1	1.24388963972414	0	1.65073375115796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113875021-2	3.08503834990702	-1.27475758535857	1.18682749312763	-1.07408835128955	0.282783084921144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	0.465515277017237
Merged-chr2-72132341-1	1.32112301864931	-0.45031066861967	1.47272218125958	-0.305767560473987	0.759781629238832	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38450684154311	0.662147012823607
Merged-chr7-114090421-1	2.25460884791491	0	1.4271023096364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64279419-1	2.22079788796905	0	1.4144880639736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-37320266-1	2.18235251510156	0.611589441073436	1.4952002417011	0.409035140589347	0.682513872927834	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr15-76782890-1	1.39593968095067	0	1.68542510358278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112392917-1	2.07551494985867	0	1.44225784798957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52815860-1	1.45847679628599	0	1.81589500558197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23048309-1	2.91523847945211	0	1.38470523837829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82081060-1	3.4231708996815	0	1.42351759149131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60861948-1	1.44120514674592	0	1.61029058220326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3350209-1	2.67679571380687	-0.884797922022612	1.17188723922612	-0.755019674595061	0.45023717729349	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	0.815004392037195
Merged-chr9-104257860-1	1.20167134767311	0	1.98004401230944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24687536-2	3.31237719073946	0	1.39327911975071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33142589-1	4.95338083261469	0.7527568991247	1.03393216984113	0.728052498105715	0.466581450365545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5040884607806	4.07910862770255
Merged-chr1-105735450-1	4.72637277656102	0.781460778920921	0.950985749807254	0.821737632850237	0.411226235970775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	2.27840581281514
Merged-chr11-77028780-1	3.05250749582513	0	1.42251878069248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73572613-3	4.06300013042811	0	1.38106593798994	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96684400-1	3.87585521843541	0	1.4034000977018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68063440-1	2.03668099790986	0	1.49257795670056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108295346-3	4.35017427137304	0	1.39100753291459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90266184-4	6.38550675735488	0	1.36347966740217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60431693-1	2.12132173062666	0	1.6115071640982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106171341-1	3.49083204898445	0	1.38783864468047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105046047-2	3.13039469180576	0	1.3952681741574	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56269919-1	2.6714434702543	0	1.4328498418185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19447825-2	6.13416438285742	0.860314177310818	0.827696380447011	1.0394079249763	0.298615059862117	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	2.33487789831018
Merged-chr5-88727931-2	2.79857692017734	0	1.41823090595383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113605477-1	4.25573659300272	0	1.44748087060456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86216673-1	1.41638641640585	0	1.55245359475816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29147312-1	2.91050609057259	1.52922977193912	1.19961812575033	1.27476380951033	0.20239285384919	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.40024388691264
Merged-chr10-23835311-1	2.55471316518638	-2.45128548210482	1.50413040247571	-1.62970276916825	0.103164331835074	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0
Merged-chr15-58273144-2	3.67321328238029	0	1.38145635792276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6067590-1	3.0138380651463	0	1.4088016217724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21556575-1	2.93851440559154	0	1.41503618139529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98955800-2	3.08820254771383	-0.0352415137487599	1.46913086485182	-0.0239880017443609	0.980862179175556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr14-47163380-1	2.9864917340875	-0.333904462279337	1.08747129455734	-0.307046690749898	0.758807833491852	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6924856131816	1.54998568242928
Merged-chr8-31097183-5	11.5214844644353	-0.558742283148156	0.469137085702001	-1.19100003000631	0.233653573100921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01914329131449	2.91610464627582
Merged-chr13-37893770-3	3.22661157073928	0	1.39962677047471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48681138-2	3.80036187740367	0	1.38897877404021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71286934-2	6.73681063761174	1.78218981247677	0.921014951616096	1.93502810062917	0.0529868474533716	0.614008109298194	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.34713452385476
Merged-chr4-101682735-2	5.53948183757292	-0.453234301268791	1.03125990375282	-0.439495707744909	0.660302391463397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.990919527803163
Merged-chr11-120064130-2	3.89670323965684	0	1.3882087558533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115469565-2	9.46771429365594	0.735868282905653	0.664938060780735	1.10667192376029	0.268435798415388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65443278894413	4.24118176562962
Merged-chr7-101548345-2	8.75466492588121	0.561233422795952	0.782509055982683	0.717222910719096	0.473236564805507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60033597541029	2.79416330971259
Merged-chr10-18049721-4	10.082169336303	-2.56570952105659	0.816451015178997	-3.14251494989456	0.00167503159104798	0.0539413757451288	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41755044293178	0.97908007631626
Merged-chr4-82622652-2	4.59055285337265	3.55954280186074	1.0980012954161	3.24183843563846	0.0011876132928875	0.0411194082726571	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.54358964719623
Merged-chr3-60631524-2	6.3131833643994	2.30754878722521	0.848266968617133	2.7203096107668	0.00652208177393185	0.148278478941515	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.46548241656077
Merged-chrX-159963441-3	4.59250361617092	0	1.37947607856569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30442691-2	4.65678723105144	0	1.36417816940278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41738131-4	4.2286819927363	0	1.36685008315152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43465176-3	4.97525656322554	0	1.36805696707396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70967853-1	2.51973701865377	0	1.47073816972224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4414647-1	5.13303867012334	1.26960327032458	0.828433008573943	1.53253583233008	0.125390262309953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.33293138561026
Merged-chr1-152556209-2	3.69713445726824	0	1.38865124506788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33996329-4	4.91779692542298	0	1.36367080524495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16584828-4	3.9230256108505	0	1.38535460701693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66250251-3	5.09864947054542	0	1.37032495774947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110611551-2	3.78226275476984	0	1.40359238935165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106032099-2	2.5772006539935	0	2.12940387618391	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103887832-2	9.41531058490818	0.527312886329711	0.489800472161098	1.07658713353848	0.281664754843365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03585270657918	4.58721105091938
Merged-chrX-42033306-1	3.18197945075957	0	1.37132024219319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167953136-2	2.45189348982174	0	1.58306395359197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50984008-3	3.76043725140989	0	1.39946041152928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3661044-3	3.79948832940497	0	1.37392556858374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-56270622-2	2.43576353954658	0	1.46156849477734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62405018-1	2.00255226679834	0	1.48890285235899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30619902-2	2.1794482215386	0	1.53710586621584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49258032-3	7.55036772026786	1.75886618147144	0.691785618555365	2.54250180156163	0.0110062033828033	0.214421864730501	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96353301543917	3.38102361138838
Merged-chr19-43606624-2	8.89641960270396	-0.303055796217788	0.55674005259223	-0.544339849103246	0.586207629860423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05471975307275	3.75468964333801
Merged-chr6-47176187-3	6.74270273259343	-0.798138980037407	0.858159611471235	-0.930058895068566	0.352340591750521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97957216467336	1.55469575053842
Merged-chr8-106106395-4	5.18543512129381	0	1.3707721843374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51914074-2	3.85931061842459	0	1.37832747254698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155093564-2	6.39171894420512	-0.386503600127272	0.969943590170815	-0.398480493137963	0.690276034547678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	1.25502116749499
Merged-chr3-89354981-3	4.42556846230748	0	1.3910606992663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132617347-3	9.04725192571291	-1.09960757079876	0.702021534354659	-1.56634450225176	0.117267987902507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54227520340946	2.04164291770275
Merged-chr17-24583835-1	3.84656657818593	-1.41284368375903	0.976996985429083	-1.44610853956579	0.148146760920348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7414873742332	1.13759034240505
Merged-chr18-9731098-1	3.2234189357568	-3.46080106542713	1.13332819457086	-3.0536618448265	0.00226066744097808	0.068537435261644	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03169262342392	0
Merged-chr13-57022925-3	4.83704163624384	0	1.42970552779174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90150502-4	3.95966966556723	0	1.40234533177367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143058503-2	3.97621043485358	0	1.38339680639257	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94828084-2	3.75230864869726	0	1.36803467608905	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92698516-2	6.61122800855685	-1.53180598896312	0.855331196686397	-1.79089222385133	0.0733105917924811	0.753895281734295	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63840556523641	1.58383754133375
Merged-chr18-12808909-2	3.54781253766726	0	1.41808591808259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37555756-4	4.55247788240414	0	1.39094022901592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105186897-3	5.37606921399786	-0.331053882660858	0.945077167554679	-0.350292964454359	0.726118844756713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.18984215491549
Merged-chr9-37177302-3	3.6000261731899	1.71340646058039	1.30334176961282	1.31462560360464	0.18863576087002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr1-131366080-4	7.84197247886684	-0.456019443523452	0.724619730832044	-0.629322421292377	0.529137995510775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75520908275751	1.88879921758583
Merged-chr10-60081253-2	2.74756971677917	0	1.39101106059417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43994774-2	2.91795146143408	0	1.39607570798839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96244717-3	4.4698460596043	0	1.36194729080398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7775211-4	4.16457294391011	0	1.37209065594752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39242864-2	2.6671438430507	0	1.44711269541891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21077614-1	2.84187670592078	0	1.44515893415286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131668895-1	1.59858982584352	0.60473522922417	1.42615972342472	0.424030506044571	0.671543565580375	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79135360541375	1.79365675192433
Merged-chr11-104331619-1	1.46276839296403	0	1.51611425146721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53097224-1	1.9235635742528	0	1.6478430713335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64315191-1	6.71314142699035	0.339495386121346	0.88627688319141	0.383057927561928	0.701676813660353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54053031365018	2.6702664704762
Merged-chr4-59832984-2	4.71836522240098	2.84932672436994	1.14467911521067	2.48919254881796	0.0128033603461471	0.239531071777744	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.13869887539473
Merged-chr2-7653722-1	1.02191681336567	0	1.72202458970698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125483977-3	12.124951637802	0.228783370994599	0.704386950889679	0.324797855362927	0.745334067797203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84542199182619	3.35429298099497
Merged-chr1-54477388-1	4.29386686552938	1.70418716299854	1.28034983877528	1.33103243456388	0.183178338849072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr2-83759867-1	2.31579094170752	0	1.55479943799094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48860689-2	3.82229200032685	-0.957535107472577	1.0117808307933	-0.946385895374007	0.343951796776132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08954570417147	0.788686275880602
Merged-chr13-107646406-1	3.61320809680136	-0.650524846171389	1.10118402878995	-0.590750346139898	0.554687709028724	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81534621159246	1.07599819202159
Merged-chr14-17812637-1	3.08152486755311	0	1.42124831127347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7089022-1	2.23229289374392	0	1.41002709059501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95605499-1	2.80672439940617	0	1.44743891687177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105921258-2	4.61112975461661	-1.89758360705497	1.17081387511581	-1.62073891280736	0.105073644437514	0.940506872711811	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58458601743443	0.601513806634888
Merged-chr9-110710821-1	1.87484157297905	0	1.44083562523901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148790550-3	5.13828072536517	-0.034194846699668	1.02281336860616	-0.0334321468111697	0.973329974536157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.14143228603163
Merged-chr1-43895945-2	2.67384253072461	0	1.44757234974513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108032786-1	1.69323101906669	0	1.44266531685329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136437263-1	2.74505817971211	-2.02594052585499	1.26354458206601	-1.6033787446917	0.108851060831407	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	0.465515277017237
Merged-chr10-80774417-2	2.73260476164656	0	1.50595169590174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86613175-1	1.96172744112146	0	1.47768366377647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152674024-3	4.43382945582143	0	1.42675609518227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-123250040-1	2.68930095925226	1.21559258929125	1.28435517911696	0.946461390942506	0.343913305802976	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	2.09073241470696
Merged-chr10-120846991-1	2.10715875213609	0	1.47429995903963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63948217-1	2.64650657936286	0	1.43259549814723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22802861-1	1.64327895865294	0	1.6538607445946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132903708-1	1.35404182704193	0	1.48373206311709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27527431-1	2.16415124703825	0	1.45918317475874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57338257-1	1.79939815607052	0	1.44115994099386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54684568-1	3.84064567644572	-0.334605196086405	0.951324460558647	-0.35172563090611	0.725044036619776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29451429493117	1.36657423908294
Merged-chr13-24487230-2	2.16864125509888	0	1.5760150913656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142924698-1	2.31248962477406	0	1.46784933921331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167201553-1	2.63822589687307	0	1.4680432199666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14021623-1	1.7643535094539	0	1.62017957032637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59125767-1	1.23906450513687	0	1.51080800001332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63446106-1	2.22732040747877	0	1.42845077955066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54019513-1	3.44610233269519	-0.0331832737812985	1.37167548420979	-0.0241917816300516	0.980699633522567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr6-129922844-2	7.25221818662149	-0.30083632164727	0.678082770276908	-0.443657227161837	0.657290424232981	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66393867450529	2.51125069396247
Merged-chr7-67234930-2	1.95920747038355	0	1.50928933421342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5537414-1	1.63323345574599	0	1.58226780744655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61518157-1	2.83635094918114	0	1.41273535610811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3429939-2	2.88977869944185	0	1.39991897246874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36940926-2	2.44373990348314	0	1.46189188476479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77423380-1	3.50193671233578	1.11508525576306	1.26854233807461	0.879028805184013	0.37938565773127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.36465105606579
Merged-chr11-102438455-2	3.19589826132108	0	1.4452732928526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50083591-1	5.84302318760914	0	1.37342102756466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90505435-2	6.3420943047006	-1.32882854024839	1.02517762932349	-1.29619346173723	0.194908841556197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	0.724326877898254
Merged-chr6-108468105-3	7.22631088486558	-0.480535605317333	0.744604666766894	-0.645356692973521	0.518696061218318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09247499969	2.32937334132141
Merged-chr15-84133712-3	4.44189436944267	0	1.41051023294112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20533410-3	5.24772134711852	0.0218268543910847	1.14899917553856	0.018996405616091	0.984843972796305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.67591700901439
Merged-chr7-142284086-3	7.71012872416781	0.0548463120717867	0.660593168970678	0.0830258541081299	0.933830981976466	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48246463423721	2.83184297529279
Merged-chr5-104032629-2	3.58051875254149	0	1.39862174484185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112180343-4	4.124683370402	0	1.38628139186963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132048377-3	4.17898207076592	0	1.39417637892963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115711115-2	7.50879504675334	-0.371343736745652	0.646395627165139	-0.574483677085245	0.56564054312642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20213796229157	2.42642262737738
Merged-chr7-123240273-4	4.56056995899977	0	1.38425916007408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-138840923-4	4.11610645213538	0	1.37013868128713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62009001-2	4.26674561580846	0	1.42114748345211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-7455751-2	5.98422014450402	-0.801297713692049	0.844575533400266	-0.948757905010603	0.342743755927331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3959115977886	0.988408630094828
Merged-chr12-34712129-2	7.16582604934256	-0.0132991590372592	0.698382639456796	-0.0190427972946225	0.98480696428669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44823763137854	2.44305708668716
Merged-chr15-93252632-2	4.60125469498071	0	1.40776888714107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67451099-3	5.05862109450428	0	1.37803590043188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-103443963-2	3.59289227194213	-1.85489854793152	1.27724616535542	-1.45226393959488	0.146428230092909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr7-31019379-4	9.27747392803515	0.476666497674529	0.580019130986412	0.821811682080011	0.411184083976686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15436071963416	3.09689777758551
Merged-chr14-25614098-2	2.85107958851485	0	1.40336533457489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32859251-2	3.40934952863959	0	1.40537089341875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88234237-2	1.62198993046943	0	1.67974075198945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95797714-1	6.28451469379969	2.23029604104824	0.728261916287722	3.06249165467427	0.00219502595964831	0.0669205923390478	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27416815045033	4.43554387024877
Merged-chr2-68826488-2	4.30365137483028	0	1.37948031741216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130690957-2	2.9678665877075	0	1.37845860038813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-16956302-1	3.23020075168582	0	1.38240374579771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58145457-3	9.05672325057259	-0.00425210876708289	0.773681115074307	-0.00549594488508938	0.995614892504837	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62100587342732	3.44642423008115
Merged-chr11-61104487-4	4.54925589341135	0	1.37683491190578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58100122-1	4.42938313839048	-0.592112027476772	1.0314207634378	-0.574074178517815	0.565917605845758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88737785686289	2.11378131411959
Merged-chr19-34826422-1	2.38325730803702	0	1.40704914587074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77861567-2	2.00935553326819	0	1.51578792192159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89939664-1	2.47595112778731	0	1.46202918120219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46375141-4	6.75182998296863	0	1.35435356795248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116085660-2	2.6870047022365	0	1.45355939532657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29650268-2	3.30770875199405	0	1.45710704897505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55023857-2	4.35637576952676	-1.54688483565837	1.18394099315777	-1.30655568529017	0.191363655287932	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26648457881507	0.465515277017237
Merged-chr2-152763613-2	3.29797072071768	0	1.42937754806202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-71307663-2	2.80666434373796	0	1.40772877114986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58983712-2	3.41456076428131	0	1.40224020533477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101231208-1	3.07053713957984	1.22209555838883	1.37412483693829	0.889362833373863	0.373808112757277	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr1-191734014-4	4.65896547250037	0	1.40497049593593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101673370-3	4.35791890214496	0	1.3780609801964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16950362-3	5.51247303601275	0	1.36255207740581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-14387607-2	3.17991076817188	0.518720021798143	1.14528725314649	0.45291696067781	0.650608537426753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.13341594473881
Merged-chr7-109480987-3	6.45787444363389	0	1.38733935059304	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70021588-4	4.09112426620612	0	1.38049544530755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32384937-5	12.4120730011305	-0.413517463534104	0.44720428250999	-0.924672414166487	0.355136332860988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.42998654975951	4.04739205866376
Merged-chr3-9647207-3	5.00435280331974	0	1.36300561917803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29870387-3	4.75225826355927	0	1.37778103442107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173802063-2	6.16003452900599	-3.11427348717762	1.12650915832609	-2.7645345483078	0.00570040703661238	0.135816817910921	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77338015316878	0
Merged-chr11-83562479-2	2.96267800919952	0	1.39478771749473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148900854-4	10.8773796436001	-0.167185260792259	0.617997518007557	-0.270527398445335	0.786754541530529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34574658350842	2.62616322869683
Merged-chr8-88209914-2	3.95135291656266	0	1.42726624290556	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108070479-3	3.62904808999504	0	1.37360556322893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73968312-3	3.81613276829259	0	1.36787849578869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5474567-3	11.0225705666185	-0.204746672904593	0.53209001721503	-0.384797057415664	0.700387779423686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74213223057347	3.53939524660275
Merged-chr15-38452841-1	1.76477648692862	0	1.47127565015617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74824803-1	1.95829346409228	0	1.43812740921917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114673059-1	2.19226674113523	0	1.41507265856116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44020201-2	3.22178944236688	0	1.4472070532825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84420353-2	6.56685329845293	-2.15227428733428	0.806551673632466	-2.66848902270711	0.00761932682915933	0.166738722667581	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48904553775198	2.34876946313508
Merged-chr4-101660746-1	5.20010669027049	0.175017546959804	0.783404999617527	0.223406216510299	0.823219366513531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01292578228943	3.23580712014897
Merged-chr2-18928400-1	1.67832309129013	0	1.47711570950304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63130213-1	2.12709473129787	0	1.52526744801895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79686935-1	3.14205698627419	0	1.38656492857168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-70718320-1	4.60476497436218	-1.85218791990924	0.862988534231455	-2.14624858435544	0.0318531512690291	0.439245421063713	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44912687009306	2.14874982292893
Merged-chr11-68408340-3	4.21214599099707	0	1.37339639956264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32480980-2	2.78252871749777	0	1.50303158957098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173083820-2	2.69417255271879	0	1.40586002918476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162186809-1	2.36149808929618	0	1.5491288844378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137676300-1	3.76953738182925	0.183174240690372	1.07535079746546	0.170339056912501	0.86474349708954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.30064958020929
Merged-chr3-89887800-1	2.10210340135518	-0.420720269724166	1.24813302126019	-0.337079672244695	0.73605684082759	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	0.724326877898254
Merged-chr1-166731038-1	3.10220457962483	0	1.43114073819851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3000980-1	2.68304405749437	0	1.47490941519568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-84548683-1	1.59134377187292	0	1.65790727071789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131050701-1	1.96662658626349	0	1.48376799375781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89226283-1	2.12031424126194	0	1.47207929264167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53196012-1	2.11431935769045	0	1.46040323092632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128762727-1	2.25247332533163	0	1.41797189448184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-35065721-1	1.67803070490478	0	1.48928267734716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152692782-1	1.78418852867881	0	1.59419118672646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25061487-1	3.14897648337013	-2.44650179530893	1.52551711531169	-1.60371966381319	0.108775859502794	0.960572215286905	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97978184934906	0.577068348605183
Merged-chr1-134556396-2	2.82856192555914	0	1.40968570690621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50074092-1	2.28778855517758	0	1.46395416894579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79946153-1	1.92571352154001	0	1.46984481058136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106552073-3	5.9950905959358	-0.0522549844309984	1.14150852739359	-0.0457771301545266	0.963487887190139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.859510663435501
Merged-chr2-58035785-1	1.61342956543697	0	1.44122567921597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53579003-2	2.91888464635363	0	1.41004842711538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70783072-2	2.69114233223498	0	1.40683083022237	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159946321-1	1.98368047052285	0	1.44322208101775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40968213-1	1.39245756856319	0	1.54404778379484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7238786-2	3.32421117919848	0	1.91148696014353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148533106-1	2.86798688536584	0	1.39380542846201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66772329-1	4.95954235544629	-0.362145149210993	1.05401190020138	-0.343587343882742	0.731156644007034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	1.39949824061849
Merged-chr2-13279326-2	3.18158976464505	0	1.42888936625277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121658475-3	5.30314936059609	0	1.35958532990594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-81137294-3	4.79006601864151	0	1.40471825508133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22519752-3	4.24084363872245	0	1.40879316051321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11807449-3	4.39563217819037	1.10657520079301	1.26891481403459	0.87206421467694	0.383173347004148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.859510663435501
Merged-chr12-17033295-3	7.32958034496287	0.0238316399352148	0.689338236149029	0.0345717656231427	0.972421215804888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44080092439194	3.75289300084581
Merged-chr11-8546008-5	12.5514320582971	-0.371271391259571	0.615738929346905	-0.602968845340617	0.546529414971094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28069623471308	4.0905630176071
Merged-chr5-105405181-5	11.7013241842398	0.17734047058903	0.60054836074981	0.295297568321747	0.767766573942149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18657025155022	4.74502607624553
Merged-chr4-135067329-2	3.63552863631172	0	1.3772317119259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45241566-3	3.75352701785346	0	1.40551481887198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100731991-3	4.704553114569	-2.21145616297232	1.24033591269095	-1.78294939326112	0.074594541625285	0.761623720550126	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0
Merged-chr2-84783501-2	3.96235792558601	0	1.38329123896272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91971048-2	5.31365989195961	0.462644374190928	1.0636559378439	0.434956791694069	0.66359379073393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	1.45526469271556
Merged-chr2-128765839-5	12.8388975184785	-0.146447530024236	0.469700383951974	-0.311789249121009	0.755200695020874	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47431195582478	4.40845785716673
Merged-chr3-88292150-3	4.45870108054559	0	1.37209963187804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-123209681-1	4.38477398456805	-1.62539742043871	0.787210242598982	-2.06475644304684	0.0389460510471451	0.498837980412761	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17091477531552	1.56533893459231
Merged-chr11-88599531-3	7.42252603386476	0.871376135178886	0.866481274827459	1.00564912421495	0.314584384379517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04904474316647	2.96063207456072
Merged-chr10-94008800-1	6.89410106796194	0.0772980657888842	0.767736343978435	0.100683087879262	0.91980203706221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2786782253812	3.58489187517155
Merged-chr15-8411377-2	3.14636356029564	0	1.43626376240385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132019147-2	2.76502229890366	0	1.434785020257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97540328-2	5.37370549625468	-0.0362440154944194	0.717489287289841	-0.050515061529801	0.959711947362617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57151361581017	2.54635642558252
Merged-chr2-91085786-2	6.6786962277133	-0.158239919684014	0.672591853526157	-0.235268861575441	0.814000061729738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34578659902288	3.32932806790585
Merged-chr11-50099082-3	5.89024390874883	0	1.38964108691701	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145219855-1	3.57536825467264	0	1.38539116073394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45571901-1	3.47484414066959	0	1.39771463941157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56447126-2	3.36946246253751	0	1.38677842532632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99891885-1	2.38380917912043	0	1.41519830892365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126483491-2	2.69459520161196	0	1.42258748894157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16637712-1	2.69250158998162	0	1.42202768947691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85865074-3	7.13766413941672	-2.46150141878645	0.932986062994841	-2.63830459683947	0.00833217039528716	0.177758418570414	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8057511416468	0.577068348605183
Merged-chr14-93701284-2	5.51086818783652	3.19488249703667	1.14777781722352	2.78353741385688	0.00537696606321763	0.130252450191821	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.80341302213202
Merged-chr6-70874587-2	3.76744058511563	0	1.37627150650309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10860343-2	5.28375825496216	0	1.38882322239137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85488112-1	2.20186243355427	0	1.51771419285659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97453292-2	3.68677076966735	0	1.3920935296383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25401136-2	3.20465548718056	0	1.45736579830333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83137936-2	3.81994651965701	0	1.38811416623485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3025151-1	1.82589910464596	0	1.72230835660682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97425789-2	2.31425463578115	0	1.52048685574733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15035045-1	1.88719597196641	0	1.41594787033889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38695560-4	4.97307844359677	0	1.37581754031235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14449966-2	3.86602170885254	0	1.39529333723136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40408141-1	1.81278905114676	0	1.52791737387372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161650143-1	4.1975039062903	-0.30299334578098	0.972502743300143	-0.311560402136025	0.755374631755553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33289557416955	2.28733524435458
Merged-chr17-44252880-4	9.98841209910822	-0.401898594196945	0.651244829780112	-0.617123661976163	0.537153162549403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26988956036782	3.59050140087896
Merged-chr11-70792616-4	6.00916282536725	0	1.36959062158741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37222837-2	7.01610937959443	0	1.41237571908362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138889396-2	3.78305439609988	0	1.37638467387011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-56485252-2	3.51123323641377	0	1.39994516026565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-66141059-3	3.45997303717414	0	1.4818944887689	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78830140-4	8.02446159946236	0.0209363577424527	0.60115532079339	0.0348268692271099	0.972217795078912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30469973617289	2.74220407548581
Merged-chr3-149101255-4	12.8249936911392	0.252246810071413	0.42733918123636	0.59027306913825	0.555007591496883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07466180698264	4.30682381587162
Merged-chr5-92096944-2	5.07875284666652	-0.315986582940219	1.0426208414639	-0.303069505589929	0.761836892917698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	0.765562747387088
Merged-chr18-84784873-2	3.91600142573137	0	1.38327258292527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139298651-3	4.50250908663507	0	1.39048407417247	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47627027-3	6.63930380328199	-1.4490436236565	0.776702908603056	-1.86563434693799	0.0620925407841236	0.681876449390742	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87069511350217	1.26296211256663
Merged-chr4-109649452-1	3.59130859687568	-1.19316974006631	1.08925292495902	-1.09540191513482	0.273340595461298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0.723581231604105
Merged-chr13-6002669-3	3.17016574802314	0	1.4262563514833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24053535-3	10.6551700675477	1.6253477465832	0.573967479356719	2.83177672087768	0.0046290160083534	0.116765049279853	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73562029706227	4.39900411837219
Merged-chr1-7908030-1	2.04177645879625	-2.00802067680875	1.957847454081	-1.02562672726272	0.305067564262461	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95710352170887	1.27743081564928
Merged-chr5-5336635-4	13.4101147903786	0.0465795186985844	0.506857439349725	0.0918986584439675	0.926778557359395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69301842408876	3.62672502735992
Merged-chr5-92091848-1	3.38037144787267	0	1.38321421496879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92376136-2	9.06136926228593	0.547753424090499	0.842406737863699	0.65022440997988	0.515547275743106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88300575199072	2.59487095737424
Merged-chr15-6339960-1	1.13308603338453	0	1.5625659029196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55473553-1	7.78402353752029	0	1.34999653491504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67451199-1	1.6376633372156	0	1.48264504594909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88274532-3	4.34209525907837	0	1.38282112602345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84494277-1	2.34843498369822	0	1.51938975709824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83396372-2	3.60418653994509	0	1.37944186057922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11579645-1	3.28615047067857	3.44985189536743	1.19520653156238	2.88640649483212	0.00389668515348491	0.103276405781709	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.92385917873864
Merged-chr14-20378470-1	2.36473532822197	0	1.44056348978766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66932040-1	1.47685419413733	0	1.82656164333231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97396331-1	2.3645116423054	0	1.41790038406565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89458956-1	3.95123782551177	-1.29048939405705	1.35312872773501	-0.953707779316157	0.340231581274356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr3-48308627-1	1.62186952766739	-0.160412976064418	1.45343604013291	-0.110368101268323	0.91211745004811	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.577068348605183
Merged-chr8-105780498-1	1.16126236915537	0	1.59680141629167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83721109-1	2.16429606423821	0	1.59800530258099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13429926-2	2.56442410836074	0	1.43415409580691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42847733-1	2.01898996776889	0	1.62513796514212	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53087555-1	2.34898900305812	0	1.46781255809722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86630219-1	1.91833715385915	0	1.56572918667651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106749748-1	4.46264566505579	-0.39115058593207	1.1349305140184	-0.344647166589203	0.730359642014777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91568416616513	2.5526087757358
Merged-chr7-125607569-1	4.78343486769021	-0.0302866374610544	1.1143161174928	-0.0271795740774161	0.978316507212345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.730937814817307
Merged-chr1-57430918-1	1.62404449734946	0	1.46187073211523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-70333287-1	2.26480970399086	1.85589234180664	1.48901966946634	1.24638537681089	0.212622947187646	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr10-127541247-1	5.73429978195952	-0.376554235153981	0.820732522088482	-0.458802624508872	0.646375909905876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34292797565683	2.91733455646927
Merged-chr2-5529036-1	2.66254147449093	0	1.4096083336276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-52077939-1	2.73170301011565	-1.90274083179184	1.34056126720011	-1.41936133643925	0.155793698388687	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr16-43506436-1	3.27436032685089	0	1.41330932280942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-61649937-2	2.34314503082511	0	1.44043743330098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9790699-3	3.65984647416087	0	1.39851739981041	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-31364183-1	1.22017674457531	0	1.6104643303965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86627966-1	2.03523886919579	0	1.50543305320869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59931924-1	3.29412928296983	-4.48284196828572	1.15583755049615	-3.87843600198093	0.000105130174878967	0.00612733848428437	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68850931460485	0
Merged-chr9-102981005-1	2.18927783940491	0	1.44215817997453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144587289-1	1.51181314509871	0	1.52878071034939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19992045-1	4.76565066551554	0.0800727207293943	0.766433166111992	0.104474498586213	0.91679280469621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21565186750098	2.02004371945587
Merged-chr10-83101615-1	1.98259497447746	0	1.48439592127819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105744478-1	4.30274127893534	1.50794920491885	1.16409805171324	1.29537988891877	0.19518921222569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	1.8079825392299
Merged-chr6-82125348-2	2.69626189303315	0	1.57155090263094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141672973-1	4.94277417931765	-0.197385933168296	0.698111623977667	-0.282742653737292	0.77737411680876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32989721775821	3.32932806790585
Merged-chr6-3427288-2	4.14808197347651	0	1.40443925770577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120157653-2	4.77032234095904	0	1.37828830904107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46493321-3	5.04678629727478	0	1.36851447220026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133153243-2	6.50351565244715	0.533706056689083	0.981387540913515	0.543828033716719	0.586559815689162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.62830504494315
Merged-chr2-58732459-3	4.13791917203263	0	1.36586905560162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162510106-1	3.04890340895784	-0.951809070264208	1.29737954206528	-0.73363964776956	0.463168390165432	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.55634759613363
Merged-chr15-95885300-2	4.01495950753991	0	1.40804496696052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43224365-2	3.53842948314105	0	1.42258438611769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-100420077-1	3.05358735890321	0	1.41246994347587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28015962-3	3.23366809301416	0	1.44754120267504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129884236-1	5.44373298822625	1.02977685666093	0.975670509964017	1.05545555199666	0.291217027592227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	1.46460328489499
Merged-chr17-86300864-2	5.85911343045915	-0.292901374945472	0.704284337032775	-0.415885118472884	0.677494069529626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2484890300238	2.11005512232597
Merged-chr5-34210453-3	4.1260960428157	0	1.37049389671303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4756995-2	11.858781454792	0.603894286531424	0.560084185255832	1.07822056474525	0.280935336625695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16123167027831	3.45750152838629
Merged-chr1-55822812-2	7.65710427787956	0.77925443953568	0.692681204356491	1.12498279819736	0.26059632366464	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34310688897156	3.22558822054436
Merged-chr19-43723312-2	11.0351534628278	0.933582875059043	0.572607038373355	1.63040761376447	0.103015376564159	0.92895616092004	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83350369146227	4.50249739420234
Merged-chr2-48930486-2	1.94372338151727	0	1.46779278728579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34913588-2	4.75302192434893	0.238745167623276	1.0108182855279	0.23618999679907	0.813285241359876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58148496924487	1.92385917873864
Merged-chr11-69052966-1	2.73246567458978	0	1.39203661206278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-9132970-2	3.1427702650927	0	1.41961761016916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21272894-2	4.9198126284297	1.80936847627518	1.28955509088151	1.40309513650816	0.160588471272408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr8-105715268-3	4.50562443857772	0	1.39685347698801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165924805-2	9.45620573321677	0.50185830728975	0.65778023057355	0.762957419459317	0.44548879049065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95017138255053	3.86908138300433
Merged-chr15-61989329-2	3.5257896785719	0	1.38200155733726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-5739808-1	2.96548812301822	0	1.46179050232108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128454909-1	2.00346413035211	0	1.48828642519825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143059055-2	6.18743465604202	0	1.37952002889035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119360734-2	4.52016207992895	-1.61434110290969	0.944129696314794	-1.70987218092061	0.087289511713889	0.836265521194095	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21897058092141	1.45526469271556
Merged-chr12-102182083-1	2.02542659915921	0	1.44580391402112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37073124-3	7.80197022280389	-2.39770265164611	0.868353897527673	-2.76120445646955	0.00575886120088709	0.136545594734334	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65849629823118	1.21849460895724
Merged-chr18-84294256-3	4.62419609541027	0	1.36094588295569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99009772-3	3.95223151002458	0	1.37624311580329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10846254-4	5.54167064430633	0	1.35964363356879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71804265-4	4.39870880585037	0	1.38027186239495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55118006-2	4.71800617898742	-0.894151333572476	0.979450789407878	-0.91291093257787	0.361289387203795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	1.18909650862134
Merged-chr1-88695278-2	3.49845032269612	0	1.37587472346987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38028816-2	6.33802421229605	0.854775803113727	0.724665406673469	1.17954547746045	0.238181038931206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	2.92877592659062
Merged-chr16-33832833-3	4.72931966697985	0	1.36537665211747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94086955-2	3.27404049725057	0	1.38301160861444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100568282-4	5.2381181455125	0	1.38183078308958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133056700-2	9.50923295155308	-0.110743758768004	0.535498636589432	-0.206804931331527	0.836162204761336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14689525443886	3.44115149942662
Merged-chr11-119363768-6	13.7176713061864	-0.282717204169145	0.546779065933279	-0.51705930563853	0.605114759969631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46390418225941	2.9283063085305
Merged-chr2-31596694-2	2.71248287739669	0	1.41983086659936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61098374-2	3.15165307759898	0	1.39659183315378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44239084-1	3.90532915935665	0.640127136801568	1.44675729454477	0.442456477817856	0.65815891765006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.601513806634888
Merged-chr2-156439830-4	8.60207091477286	0.240929884773285	0.845494470057693	0.284957375010206	0.775676798392353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.00114351279961
Merged-chr8-109681664-3	3.7192541750409	2.15127602090796	1.25260136211699	1.71744665619088	0.0858975931555752	0.827200126776981	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.97908007631626
Merged-chr4-141856500-3	10.5123303810576	-0.58979602823542	0.74592729719456	-0.790688355894266	0.429125872599028	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77578270445089	3.82630328816192
Merged-chr5-137760276-3	4.52973439718828	0	1.35822940038245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-175936595-2	3.40442821859447	0	1.38786077855402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68013339-3	3.93242275422197	0	1.39243013244856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129307143-3	4.05327419895347	0	1.3712675182508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101465481-2	7.35512106619331	-0.83418965235034	0.764892678332527	-1.0905969895919	0.275450254791806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98372818195955	2.03009722200694
Merged-chr10-39770705-1	2.48108383151003	0	1.45644071523732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30985443-4	4.16414864526291	0	1.376873410628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94992335-4	3.68503606567764	0	1.39944329640649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136124802-4	8.33854575506402	1.3646875411049	0.684519484002128	1.99364309270802	0.046191072497001	0.559345179297054	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19193974227778	3.71529451994414
Merged-chr3-96938914-3	3.51601202567871	0	1.37773483930433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111144731-2	6.26657081288596	0.799147001820473	0.898312542286066	0.889609088376711	0.37367582446076	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26637849737819	2.28167437843862
Merged-chr4-134119908-4	11.2415718008737	0.653602369285593	0.577324790443809	1.13212247266075	0.257582948146521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34478687181899	3.63304215346489
Merged-chr4-143389416-2	3.40683287173707	0	1.40061479404251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21363501-4	4.82971869987238	0	1.38429246570819	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84458758-2	4.74583936242855	0	1.40109731904405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150589562-1	1.54035002921772	0	1.57970137100953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127410726-1	2.14457778797267	0	1.4057944070352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103059459-1	1.93916857210027	0	1.46563891075329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-91697816-1	2.75127555398156	1.08748866190821	1.35632663037315	0.801789655644396	0.422674643395409	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	2.74595546447412
Merged-chr14-7851924-2	3.57072687745265	0	1.40560869749019	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127507302-1	2.80796156525055	0	1.43237765887117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146828182-1	4.82019520514001	-0.794675968140123	0.653789491256048	-1.21549210987379	0.224178456270962	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58185980315915	3.0446437496859
Merged-chr6-129747873-1	2.09579667623008	-2.63220635139321	1.34393715498686	-1.95857845110246	0.0501621752466355	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	0
Merged-chr6-28949462-1	2.14346509527817	0	1.44175338308778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24027585-2	5.16861493580733	0	1.38180079478326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108784297-1	3.86451422983499	-1.23406193559831	1.0682416854176	-1.15522727903647	0.247997366565571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4150019944704	1.20253745507858
Merged-chr2-122753979-4	9.95654545971127	0.734272752334191	0.524145692847163	1.40089437413025	0.161245661364414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84403867716045	4.01243464387759
Merged-chr17-24674352-1	5.23222703195486	0.0533255677709431	0.781189796984345	0.0682619870059718	0.945577083490391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30811930973386	2.35163392625407
Merged-chr13-9826415-1	1.57343779345469	0	1.52027414096521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43264646-3	4.28674923452577	0	1.38202554426954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5095596-1	7.39864921597237	0.536398200842364	0.775608791905916	0.69158344572689	0.489198960617377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91056167177361	4.20513125852782
Merged-chr12-17235576-1	2.06591911167367	0	1.52394269268118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45539662-3	7.78079172275824	0.107164134113867	0.592477433141409	0.180874625967889	0.856465985875699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28226228333929	3.36043045548548
Merged-chr17-87142451-1	3.47271540681438	-0.0530125172910011	0.998694571293688	-0.0530818118119235	0.957666723091164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59691199589682	1.11816745933907
Merged-chr16-31285367-1	2.32803840834356	0	1.49533326587712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-44064826-1	2.911599752559	0	1.41888154803287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139331878-1	2.81187735924011	0	1.43606916540038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83724786-2	2.84572595535583	0	1.39752598680132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39402764-2	3.24436139325762	0	1.39323282488968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27735353-1	1.92512060813586	0	1.54737788212087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124301714-1	3.16796522095452	-0.702458783358019	1.23716291471195	-0.567798125052573	0.5701720531071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84022605426951	0.788686275880602
Merged-chr17-80252922-1	1.69636791424548	0	1.45836289679746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31321718-3	3.31538790025793	0	1.41970855225197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30646999-1	2.28028063825069	0	1.54789649117237	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111412207-1	1.72070417767556	0	1.4858493954862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85393697-1	2.25521230336832	0	1.46201555642568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65625984-2	6.40064101170675	3.06598544071523	1.1904165585456	2.57555678195632	0.0100078839511196	0.201190297225929	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.90221032624646
Merged-chr12-16592788-1	5.93983078621205	0.916924743140442	0.840925906957797	1.09037518710487	0.275547907362356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67442379569422	3.84679061068866
Merged-chr1-64308174-1	4.38264972989913	0	1.39046543372534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64667178-1	0.904329986836248	0	1.74645286750089	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102181649-1	3.21588420322934	2.65445530893936	1.26593353205311	2.09683624118427	0.0360080742099407	0.475492124377258	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr9-40821523-1	3.70453222511729	-0.00730121493085333	0.93105723606765	-0.00784185402144581	0.99374316987524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46812004905329	2.50936104741208
Merged-chr10-127558025-1	2.35996014651218	0	1.42761631929862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80439238-1	3.56713544059358	1.19892225880459	1.01005406671845	1.18698820024531	0.235232274892877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	1.72240195265986
Merged-chr5-77173794-1	1.38938744427206	0	1.59226381628585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87656289-2	2.50896827467629	0	1.42938693934038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-81312874-1	1.66477711474869	1.61917191293506	2.08874719214008	0.775188073993819	0.438228534249003	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45391938817053	2.05031105311393
Merged-chr15-78859202-1	3.78451354906144	0.663932671598801	1.15595502108362	0.574358568879619	0.565725183200344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96929568164761	2.95728836867424
Merged-chr5-110479352-1	3.28106596357108	0	1.39193407080277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123364559-1	3.73557658864785	0	1.40127667708976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31074567-1	6.95929769569971	1.04348558497539	0.676081250916809	1.54343221848019	0.122725941527446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32198339548792	3.91218346754085
Merged-chr2-27690485-1	2.8515257390396	0	1.40151583146647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130896600-4	4.68912612531506	0	1.3613985313032	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145339075-1	4.99728010489569	0.211047937219989	0.878529335869983	0.240228673765338	0.810152985968679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73990696123344	3.46953669607823
Merged-chr1-181316800-1	2.89284069183574	0	1.4069705261615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19462693-1	2.74126325109747	0	1.41562135824472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95402924-2	2.48888689201799	0	1.46457400561513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51977968-3	5.38085184849064	1.74230357768912	1.22269895885497	1.42496529098278	0.154167234512826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.14143228603163
Merged-chr16-30262270-2	3.652782047384	0	1.3852291717783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150388746-3	9.57732702999889	0.070411152533629	0.682171691973208	0.103216174699308	0.917791402921646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58209634937421	2.5903881592571
Merged-chr7-112240970-3	5.50763680520007	-1.65559396091984	1.164773885582	-1.42138657246131	0.155204407893424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	0.465515277017237
Merged-chr2-166750804-3	4.68075032682983	0	1.39030208338707	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58198710-2	3.25811936893215	0	1.37763776094352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150178398-2	3.92608718149296	-0.516024813480977	1.28117069223853	-0.402776005263865	0.687113014473276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0.716426531808663
Merged-chr16-76321696-2	3.34164614390889	0	1.39136078342507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80833176-3	8.77413844650348	-1.07101544440751	0.779035096238277	-1.37479742514698	0.169194256623448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03916278098946	2.18927216584514
Merged-chr17-45629341-2	4.29727964776666	0	1.38241335717163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12796138-2	3.14357246247217	0	1.38869781743156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34690981-2	2.78313765186579	0	1.48003991876242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101260678-2	4.26693699664729	0	1.39982115839526	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64298819-1	7.25955006562026	1.67552748179886	0.691572991359507	2.42277749815689	0.015402357180533	0.272179585264982	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	3.39717653301786
Merged-chr8-91343308-1	5.09855817153432	0.459247414430298	0.940246604456035	0.488432941160143	0.625243213830681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.85178719846055
Merged-chr2-31024834-3	3.56057653111197	0	1.40099487889815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151039406-3	3.26890535941987	0	1.38183581377303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78277517-3	6.41263570582673	0	1.37179767218742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25834647-1	2.41795167833605	0	1.53864688965035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46588039-3	6.80574325561531	-1.6578278632132	0.969935813895123	-1.70921399072336	0.0874113182289942	0.837137393870665	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59510946442266	1.20335706967574
Merged-chr11-116095241-2	3.91017326741328	-0.034163015528319	0.936801038463723	-0.0364677387466858	0.970909402340923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.25298535761957
Merged-chr4-119004423-2	4.21330775440644	0	1.42622301113413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41121206-2	4.84620899901402	-1.83085049820898	0.967836347827048	-1.89169429554857	0.0585317238290379	0.655908101470409	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68884729081939	0.724326877898254
Merged-chr15-82138736-2	4.28746006106753	0	1.39995714134872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63343411-2	4.851749995307	-0.0961657543031857	1.3386953614244	-0.0718354280400759	0.94273287814074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.465515277017237
Merged-chr16-91534675-3	6.23741164745107	1.13473474716893	1.17546356715666	0.965350844444933	0.334369113223105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.13341594473881
Merged-chr13-12589192-2	4.004284697067	0	1.40400586810222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33101521-4	6.26990973197747	0	1.36102336895382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84895692-3	4.20111229564588	0	1.36797182249191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58990609-1	1.67065611532202	0	1.53729516707317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166149569-1	1.40328394187124	0	1.58734077828114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171628093-2	3.94102235887963	0.336557037430916	1.34215976636429	0.250757805341311	0.802001365871146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.577068348605183
Merged-chr12-55506140-2	3.35611983843113	0	1.41586409242499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91180819-1	2.55850954319273	0	1.42468862189298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-161177902-1	2.16446168215964	0	1.41612824112973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97125544-2	6.47950463294691	-0.225444531651705	0.686948546250088	-0.328182558770028	0.742773634307677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39324960017626	3.19681387439214
Merged-chrX-77638235-2	2.67142961812145	0	1.39275202199839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6331858-2	3.34953712396455	0	1.37889985126178	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169719553-2	4.14732397135598	-1.11394909646027	1.05299513762339	-1.0578862680928	0.290107296336901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01259914296816	1.02748994520012
Merged-chr5-122763637-2	3.13331467443244	0	1.42459244778752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9032832-2	2.37441122902881	0	1.46253952141162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48913066-1	2.35632598785127	0	1.42859834480582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100129381-2	2.26684195219856	0	1.4752299066706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34054918-1	4.30894612041257	-0.134897703958089	1.06463784111566	-0.126707598347928	0.899171831703335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9046899025295	1.76267465112669
Merged-chr12-104069856-2	3.33737772857771	-0.834811978140553	1.20304686998914	-0.693914758406788	0.487735667638101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34557707159302	0.662147012823607
Merged-chr14-76073331-2	3.28485645686429	0	1.43686194369215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61068595-1	3.22266784669586	0	1.40698188886245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26750997-3	6.50926151993919	-0.225287212179398	0.889703438766233	-0.25321607443915	0.800101245597411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.36759862365701	1.39949824061849
Merged-chr4-150626555-3	4.96002524905768	0	1.38058711334478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86363902-2	3.03770220074537	0	1.41616478165172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36064776-1	2.88971141109096	-0.833701794849745	1.20761688068866	-0.690369444301171	0.489961886996173	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	0.879366456215217
Merged-chr19-17318928-4	10.9555434423042	-0.285898298909267	0.459837237018866	-0.621738032271487	0.53411413911643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.6470815216468	4.3322729417335
Merged-chr8-94186827-2	2.99819682506393	0	1.40663717059109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96464779-2	3.29920509434231	0	1.39197029158878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8925466-4	5.76934190402323	0	1.37385808954215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4934838-4	11.1602000414998	-0.780596829769603	0.59807934786127	-1.30517268747201	0.191834052194774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13566975801695	2.79548786681334
Merged-chr8-108574295-2	3.10264375096038	0	1.38633844944096	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58542982-2	3.10553386265971	0	1.43499536465128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24851067-2	4.44372053312067	0	1.3902169159692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117139290-2	3.3000569540906	0	1.38370821381587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98878849-1	3.45578663445214	0	1.39331437787969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25782896-3	3.16094625492419	0	1.44134533998371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43530676-1	5.15239804050577	0	1.39467224006054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24130006-1	2.79781032494448	-1.3652205985715	1.34277931298149	-1.01671256428592	0.309290186945543	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52525172700064	0.724326877898254
Merged-chr4-133092774-5	9.59765184534709	-0.478224505657094	0.769485418581415	-0.62148611800692	0.534279825487332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57132087663558	1.83763882844377
Merged-chr8-94801919-3	8.2119954021413	1.68995997306102	0.942959762177	1.79218673038543	0.0731030595320864	0.752045649717011	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.85178719846055
Merged-chr7-67384366-2	4.42716454723083	1.08689529448065	0.983769189940872	1.10482754043758	0.269234324554244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.91052780912618
Merged-chr4-6445289-4	4.15701472631171	0	1.37244763478181	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94199670-2	2.91635888913093	0	1.40719521076586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20585521-2	6.71530552539553	0.194389666961756	0.682193430139857	0.284948019686886	0.77568396587966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95613461951435	2.64546612406046
Merged-chr10-44149054-1	3.30618603568578	0	1.41861014762426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-136489188-3	3.35971678682724	0	1.384560948218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158348119-3	4.03314968413236	0	1.39193114727544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98042480-3	4.29635660338903	0	1.37118983705515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34190705-3	2.99239535390008	0	1.4000468107605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165624781-2	3.01907295142	0	1.45116483939624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80260863-3	4.48083454974733	-0.534952301660077	1.22811468348832	-0.435588230360219	0.663135511642955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.55634759613363
Merged-chr8-7964910-3	9.25567422671785	1.45214779290583	0.778854753146342	1.86446546938255	0.0622563663798813	0.683261421369668	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54723293661753	3.65489224884443
Merged-chr10-117144267-1	2.3100140037088	0	1.47987545020902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27119370-1	2.29204438277215	0	1.54763022320867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110718731-1	2.98157846452456	0	1.40936756978504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30596091-5	11.0688463191354	0.173454827220478	0.793810660685394	0.218509067478022	0.82703249418206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	1.8538004573626
Merged-chrX-42540871-2	2.94103907804885	0	1.43242633705207	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55792999-1	1.97293589047999	0	1.4403339718075	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77497727-1	2.07155281332734	0	1.4921447166549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101780310-1	4.21534762648042	-0.35296486074665	0.923158248567228	-0.382344913555681	0.702205544506515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2731134202425	2.92921889783875
Merged-chr11-5895338-1	2.41403059427383	1.84535717816779	1.39242374630571	1.32528419101137	0.185076910396564	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr6-73711724-1	0.966213702032484	0	1.72949400892833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111426642-1	2.10465952875788	0	1.43803532225811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-3259742-1	1.60260393533747	0	1.45478123827784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-3213930-2	3.5439305753447	0	1.39181401528391	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64312184-1	1.45228044793514	0	1.4692591731022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11475188-1	2.09001155902622	0	1.40885334463911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60848939-1	1.09835281348204	0	2.31840877697899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17838659-2	3.26380205181446	0	1.41697495498954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24927203-1	2.78485535190343	0	1.4016097488187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78184340-1	3.60347357907505	-0.274339781145051	1.02093700137634	-0.268713721586356	0.788149991742239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12367293725842	2.01473438434858
Merged-chr14-33371385-1	2.60123180335537	0	1.42003439334161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49529169-2	2.68700646607802	0	1.46873500995256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34363313-1	2.07086983864981	0	1.44901581676506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113664493-1	2.75400950935915	0	1.48310986296813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56076020-1	1.92816605827116	0	1.47464015697943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61385595-1	1.68394142432574	-1.34840009143944	1.63031741079927	-0.827078262495142	0.408192704048484	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr1-156469451-3	10.0846075189632	1.66314053411572	0.630790040333518	2.63659922917675	0.00837417037254596	0.17844434624901	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37475311282297	4.18685991920373
Merged-chr7-31100985-1	3.30648476578987	-2.25390675964844	1.301721202699	-1.73148194480905	0.0833658424053125	0.81450685852422	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	0
Merged-chr4-11454546-1	1.98011563811523	0	1.43027887930363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12210504-2	4.2443093885347	0	1.36437933585075	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103358386-2	2.12409315090566	0	1.47718917197746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8790615-1	2.89373568503104	-0.830639249007753	1.21344616875597	-0.684529129017175	0.493641102014865	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59510946442266	1.30139522650344
Merged-chr2-104132915-1	3.22008184059206	-0.140392841348189	0.980253038292129	-0.143221021373004	0.8861156283112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7767501314117	1.83517121952608
Merged-chr7-102142189-1	2.16668566934815	-1.45798679172535	1.19624449767262	-1.21880334209434	0.222918842722874	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92049674076937	0.662147012823607
Merged-chr1-161736978-1	8.47716593807035	-0.399776529426708	0.594122171587135	-0.672886063751412	0.50101977895986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32545758459001	3.55513592655982
Merged-chr10-84055913-1	1.95271468064916	0	1.45763504215339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51821018-2	2.80915458831512	0	1.38734817697524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34842399-2	4.98116695187293	-0.177467002505144	0.875475769458358	-0.202709211032694	0.839362323284449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	2.34376119240954
Merged-chr11-95704251-1	1.50516711076042	0	1.61668680839295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120837595-1	0.842796649956115	0	2.25698964048232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125578606-1	2.87379048078634	0.480859681707896	1.22289323861135	0.393214768489467	0.69416086278393	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	0.94927122251658
Merged-chr1-52366844-1	2.50969491967354	-0.686088479967904	1.45809896235567	-0.470536292584334	0.637971911282204	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr2-28418253-3	3.28881135619183	0	1.41425698017766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112635370-2	4.37117351116753	0	1.38156209262914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20003257-2	3.54590954535308	0	1.39129648570108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30380697-2	3.09920870281278	0	1.45202176287364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9782498-1	5.89917660857356	0.569206178005185	0.69906678461262	0.814237195263974	0.415509081065984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06205865679497	2.59402064817223
Merged-chr3-51636855-3	7.97989118127746	0	1.36984549463715	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12247291-6	12.6325519340563	-0.311880378861967	0.491830462912344	-0.634121719535602	0.526001389298139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.69831556690915	4.20577929452446
Merged-chr6-127251805-3	6.71727157270246	0	1.35152827727357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19319781-2	12.7083399793216	0	1.35836593703877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16153711-2	7.46271953818334	-0.0377686029807419	0.561978563477604	-0.0672064833701562	0.946417323813417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26702399068743	3.23206064634892
Merged-chr10-95867748-1	2.52898648818182	0	1.40798407499667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129284562-2	5.26903061034413	-0.0736215125592424	0.995898420090806	-0.0739247207084932	0.941070285382618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	1.4068548238317
Merged-chr17-81424556-2	3.46595318418258	0	1.41163982079382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169159699-2	2.19713513744971	0	1.43291045763326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111626092-5	9.80863353799209	2.87126340266099	0.983483342420841	2.91948351213899	0.00350611940850892	0.0957734396618776	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	3.0675982900961
Merged-chr11-30800277-3	4.56965641359727	-0.0373503330826165	1.04868290343939	-0.03561642223795	0.971588213577287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	1.13743241080208
Merged-chr7-19327996-3	3.69679040438693	0	1.39656031924974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47353014-4	9.1919549224314	-0.154148570894581	0.706585897333745	-0.218159704964747	0.82730467967508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30483543417642	2.43904428037542
Merged-chr8-47867274-2	3.43325220476671	0	1.38363386623871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191314093-4	8.75225732144376	-0.770112320415998	0.735851959533788	-1.04655876829344	0.295303126884883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77917504929676	1.41437199749648
Merged-chr6-116074027-2	4.03697697227335	0	1.38237039469877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55398485-2	3.17854192158931	0	1.43560512628331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106033569-2	2.64466426865642	0	2.01076794815719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3595364-3	4.77511354953352	0	1.36513655933044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8756778-4	11.1240695882821	1.41470317071733	0.601157195657805	2.35329990381187	0.0186076196394753	0.305112141313926	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	3.33142030490313
Merged-chr13-58687077-1	1.65262171267819	0	1.48377592159931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120941094-2	2.76614138789316	0	1.40395762837192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90324331-2	4.35698146283411	0	1.37761892874704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87201640-1	2.54480340324876	0	1.43329096502887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-160751012-1	2.64854988822702	0	1.38105438717581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63609018-1	3.28087651452437	0	1.4528963902878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47736946-1	4.13053363208541	-1.52880323530116	0.987787050033722	-1.54770528247862	0.121693269693997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43918820551122	1.27673210875742
Merged-chrX-106030314-2	4.30043922015248	0	1.38142567481095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68144463-1	2.97013276448548	0	1.40517548360929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49817050-2	2.34401126203586	0	1.4284959389643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133829970-2	7.11839812950347	-0.109727473087558	0.715700559432353	-0.153314778983247	0.878150046514995	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27013095979932	3.41100316668631
Merged-chr4-88738660-2	3.0705145464257	0	1.37699536801581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63424932-1	2.27671459421028	0	1.45612185515155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34624899-1	2.82033063707516	0	1.4012845639339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139263336-1	2.17991386126224	0	1.45126344081243	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87539738-1	1.55681752644891	0	1.50650193940165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135956498-3	9.78143473650067	-0.210159780308696	0.665674409164155	-0.315709568244602	0.752222963476652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05750724623645	2.46284082507861
Merged-chr9-24510673-4	7.42934123913588	0	1.37565801000144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102619926-2	3.66985721640009	0	1.42632852713074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100198837-1	4.28955793208924	0.128287383741196	1.04277227175732	0.123025311677114	0.90208705439669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	1.5608848804954
Merged-chr2-126495997-1	3.79968377378734	0.802447693470079	0.903474021240908	0.888180151951608	0.374443853462012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.52554022439958
Merged-chr9-123498072-3	4.5371928509277	0	1.39508788084067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141713809-4	11.5080049160567	0.0395776701104618	0.538729769865614	0.0734647913003479	0.941436260811597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24824619493465	4.42789693266799
Merged-chr7-92848475-4	4.68045634120497	0	1.37164293876585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64110175-1	2.48488461530086	-0.66263626886669	1.20924292211938	-0.54797614006731	0.583708286155294	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.723581231604105
Merged-chr8-70863443-4	10.4700971020511	0.583298954242373	0.566814025688148	1.02908348736468	0.303440444914157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98445054292691	3.52579579296094
Merged-chr10-127508427-1	3.13757319029301	0	1.40942604234753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63250249-2	2.7879821167835	0	1.40719609141056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103036875-1	5.87375818110468	-0.0191869369551834	0.612099060610282	-0.0313461303731678	0.974993501748429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09928038700072	3.02298317660234
Merged-chr5-135870707-3	4.44533832849578	0	1.40085731487056	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60874111-2	3.7082685554726	0	1.36884740549446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103387616-2	3.45073738095794	0	1.37624493529143	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75099971-2	3.22063953711455	0	1.45971200745017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33435971-2	3.17759176989939	0	1.40879291148915	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34101169-5	11.1295828641431	-0.0497820030145465	0.48100985202039	-0.103494767945909	0.917570301771893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8203591044281	3.08022312332306
Merged-chr2-27565547-1	2.98366854655671	0	1.43778814887369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133613049-2	6.7382361913826	2.53129205956455	0.965530468151388	2.62165943288251	0.0087502823585219	0.184220216393064	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	3.09941507324605
Merged-chr6-47841053-4	7.13152411871801	-0.0357451603941902	0.716613878351656	-0.0498806421059143	0.960217503459843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08206008520384	3.0541365665053
Merged-chr5-136395807-2	4.97896130248856	-0.556525737137047	0.97130904231044	-0.57296464142169	0.566668635046084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91160626283417	1.26411936531267
Merged-chr16-91386142-1	3.03221823181258	0	1.39274787976136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72318641-1	1.80310790732243	0	1.46400824969992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80847671-1	1.61112292506	0	1.50515945397772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9992462-1	5.22668532304563	-1.07298017031478	1.0323275176435	-1.0393796077083	0.298628224190044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82024390243511	2.33281980666031
Merged-chr11-4976584-1	2.49752875646966	0	1.48021734272919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120620452-1	2.56710871353689	-1.56846438322971	1.2800161631135	-1.22534732640765	0.220444384013664	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59982791176663	0.465515277017237
Merged-chr10-94338091-1	2.57247870392427	2.47082926757314	1.24114430794378	1.99076711044713	0.046506496772215	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	2.07655399013001
Merged-chr6-72869872-2	3.38860041920533	0.618846786720244	1.42467153572018	0.434378571624521	0.664013555795977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr6-31813977-1	2.32882372651722	0	1.58564837705735	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32343880-1	1.91855283069403	0	1.4482900091501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141635581-1	1.92862495302262	0.608920434183852	1.51986457429054	0.400641244281973	0.688684275135376	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr12-54710715-2	4.90658690275438	-0.940909395696479	0.98600821690808	-0.954261211581967	0.339951436979903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59767077172848	1.338064021838
Merged-chr1-153543214-1	1.61283619335381	0	1.46940987312399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-85695690-1	1.14473853627735	0	1.8770105011432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38187989-1	4.21801011448952	2.52357871640857	1.33311619223699	1.89299232212757	0.0583588905191683	0.655169543521575	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.887876939341704
Merged-chr1-162631275-1	1.0467463201866	-1.50840451687862	1.75623841723632	-0.858883681210149	0.390404693507738	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr3-58449691-1	2.80943236919878	0	1.47255176651363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75109125-1	2.04161198045066	0	1.4724537175538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73667167-2	2.56457842589928	0	1.41825566542915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91064809-1	1.32877860803959	0	1.54517237433866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10888083-1	1.98724704641152	0	1.45942867265252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106574507-1	2.55874198342338	0	1.42811659102541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145275657-2	5.28743192005352	1.60931930978852	0.986794203388415	1.63085606326274	0.102920694495002	0.928623919345333	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.07776144459665
Merged-chr4-139197675-2	8.51147118980684	0.878057837626419	0.682681723582556	1.28618916735983	0.198377050696306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69347364329618	3.98423742281568
Merged-chr4-55765531-1	2.74442535192634	0	1.41674025972174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49055904-1	2.87803159130335	0	1.42071115748558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16253568-1	1.57519479451306	0	1.53387963182157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79552972-2	3.39849811551916	0	1.4025782348462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-42188228-1	1.94499912117341	0	1.41397375902579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31851257-1	3.41940162199972	-2.20938477008444	1.24429687851213	-1.77560902726552	0.0757973810634524	0.768707059184368	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.303163067301871
Merged-chr10-24059108-1	2.2229300187143	0	1.43007670042364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60928566-1	2.17666158624691	0	1.51073650592299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99705773-3	4.37352846341965	0	1.39415358603212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55204838-1	1.788299499712	0	1.56550577242547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89267804-1	1.27406971710344	0	1.62251008195031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45588726-2	4.1395205889833	2.32643861012515	0.994803585955217	2.33859089670579	0.0193566163915822	0.313232826839466	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	2.71313337449854
Merged-chr3-149441439-1	1.59403404993083	0	1.46905840827049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-28316075-1	1.65713904415035	0	1.46330891595219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82276370-1	1.46395119809158	0	1.48368398682923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-117769577-3	5.72025203389163	-5.15686756691572	1.07743160582594	-4.78625978580105	1.69918090183416e-06	0.000196522924771921	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85374986918418	0
Merged-chr14-75064775-3	4.58638759621508	0	1.39284807076752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65401770-3	5.12229808603554	0	1.40644935312932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128837728-3	5.38131027266897	0	1.3591661074694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32786217-4	6.21918191826734	0	1.3621701217941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106561285-3	3.92983002151069	0	1.39525549098913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5175491-2	3.69688145163097	-0.674569762798396	1.55371019943739	-0.434167042890407	0.664167143698536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr10-45051305-4	4.02677686357776	0	1.37076766516584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130933048-1	5.71063963128766	-1.53580308029973	0.693897065355743	-2.21330101679039	0.0268768995727196	0.39441441130426	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60233872278206	2.27840581281514
Merged-chr8-122913382-3	6.8096020368895	-0.43148740274288	0.73996500350398	-0.58311866196326	0.559813421593476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2472067585338	2.1304360554358
Merged-chr1-89943412-2	3.79674590886109	0	1.37269170430001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58074991-3	4.08982393988801	0	1.41857355649341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4528166-3	4.20919450059808	0	1.36055381078957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78239685-3	4.17762027423751	0	1.38318813173293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39356914-1	5.78918891415989	1.29199133372774	0.912355984810386	1.41610441016206	0.156744937073042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	2.34131617969248
Merged-chr2-93646086-3	6.82814784492748	0.372605499533145	0.708973691208851	0.525556172469285	0.599196614913574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09032553771468	1.83058014540844
Merged-chr4-141652013-4	13.8806825387036	-0.196891524506287	0.578524201657926	-0.340334119025684	0.733604925764667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46373146916575	3.63547428789341
Merged-chr2-153704426-3	2.77659291834502	0	1.44908919957832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21908674-2	4.50971182801059	0	1.38120627667095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127971072-2	6.41308810983309	-0.472872039647528	0.886781491789229	-0.533245274090498	0.593863805126446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3040854270693	2.21264925554843
Merged-chr7-89243990-2	5.45096789635037	0	1.39405191745219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162313835-2	6.93638051655268	-1.03829809976429	0.766510305792974	-1.35457813406715	0.175552003954357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39582461268914	1.6567620950254
Merged-chr7-125565808-3	9.32237534674426	0.0688763591429855	0.751261855210781	0.0916808948374743	0.926951577163821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59202657767585	2.55876018088062
Merged-chr8-126567085-3	8.25209795629626	0.175720148809214	0.867278585273777	0.202610962374615	0.839439120983853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	1.80806300091025
Merged-chr3-9067267-2	3.36862334612355	0	1.37918653592049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64969557-1	2.87353577665535	-2.52680013828725	1.34541422600053	-1.87808341063748	0.0603697553835994	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr4-3784771-1	4.37023972615736	-0.872466953029676	1.12076827254792	-0.778454364207008	0.436301200217132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	0.577068348605183
Merged-chr9-72030716-3	6.6759404150053	0.500675115671119	0.732470897476156	0.683542673703862	0.494263994604	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38409874358372	2.69622693919624
Merged-chr1-36914042-1	2.09275107401866	0	1.40198436947545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54257185-2	3.2774729957199	0	1.37998607202757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79339239-2	3.33373328358297	0	1.40075622152786	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53415545-2	2.46855128610796	0	1.4197984536332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47455046-2	7.37587337662416	-0.649055786756213	1.35121794775932	-0.480348701578838	0.630979464278767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	0.413263464506793
Merged-chr10-57721710-2	3.26337901464363	0	1.43584854471628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136652796-2	7.50565289597935	-0.41516777356869	0.773551136766522	-0.536703721106415	0.591472285277104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.40372984641911	4.02194295807506
Merged-chr18-21593964-2	1.81746613021274	0	1.54763988161161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157408480-1	4.64754377645887	-0.626585957995649	1.11542887562353	-0.561744430047489	0.574290158245583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65199033198162	1.02674429890598
Merged-chr3-37693114-1	1.52478857177688	0	1.46672518328859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57820243-1	3.5805569709986	0.570487794837407	0.720449160909061	0.79185017596185	0.428448041473873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18395292683035	3.1113224876464
Merged-chr2-126594018-2	10.1192726188006	-0.33857469760678	0.589011154742434	-0.574818821139021	0.565413836436784	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70246904678033	3.37453613617352
Merged-chr6-119500105-2	2.38358244015646	0	1.44320852445601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86769196-4	4.27864244048603	0	1.38610011849917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103402401-2	3.67596184836043	-2.79525614452274	1.19773028579344	-2.33379432554886	0.0196064940825205	0.315883050335427	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	0
Merged-chr12-35329928-6	13.0903399858685	0.220911199390152	0.519969347886177	0.424854273214794	0.670942910486527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34032013840784	4.27368442776151
Merged-chr4-99484367-3	3.87841790276937	0	1.39003228171122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11324258-3	5.11956785982814	-1.44876244118947	0.978050245819353	-1.48127608717667	0.138533017979085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	0.788686275880602
Merged-chr17-63198877-4	5.62812352494554	0	1.37486644280308	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45278344-2	3.83363950087339	0	1.38545285003565	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160010542-1	3.12737019041671	0	1.42868233276155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23074912-1	4.46180505854764	-0.043175368913747	0.997555226046898	-0.0432811816192291	0.965477392056409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	2.00101204725338
Merged-chr6-29912885-3	3.81340552942207	0	1.39610476999969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45115149-2	4.1104638739896	0	1.3918334154031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-78805241-3	4.24136718349745	0	1.38198122729245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97965580-2	3.06813653508893	0	1.38467141989503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130473125-2	8.87796067724065	-0.705268217628206	0.536296004194228	-1.31507266903444	0.188485480980272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91287286455926	3.02207335452703
Merged-chr4-108339546-1	3.65713294034706	0	1.37616096817331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25264423-2	2.98536362225162	0	1.39392218331424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10466651-3	6.48926672064469	1.30376812809726	0.774094259780726	1.68424983343317	0.0921333961084314	0.863738236436364	C57BL6J_F1_Control-BALBCJ_F1_Control	2.311378010734	3.26480239864868
Merged-chr10-20040335-3	4.72831701642262	0	1.36722688500209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103348745-3	4.13969430714842	0	1.36079602825093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28601255-3	9.02834327759948	0.347959766281564	0.540561615286456	0.643700470846736	0.519769684546134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16823365037562	3.37500354564583
Merged-chr5-44255994-3	8.15118962819977	-0.0551507397879816	0.720181776636775	-0.0765789160141398	0.938958532273812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63486423736552	3.20933137064535
Merged-chr15-81989921-6	14.1304196665355	0.128501106924324	0.404829780530851	0.317420093837516	0.750924862279567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.75469103636898	4.92578294943558
Merged-chr15-38323402-1	1.66357187324744	0	1.50946523880554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54527861-1	3.93266691995213	3.22695274593259	1.13983160083613	2.83107850630342	0.0046391332806628	0.11683487122028	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.94207584056134
Merged-chr8-95099182-1	3.53725822584939	-1.09671394424587	0.984198588016914	-1.11432180212295	0.265141157043002	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	0.730937814817307
Merged-chr6-4797026-1	4.265757803261	1.34853973326092	1.05021357761237	1.28406236789167	0.199120134019281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03300427768847	1.61220381723996
Merged-chr13-70043045-2	4.2889896143835	3.3991133587377	1.14177240379804	2.9770498458631	0.00291036688089089	0.0830034802089969	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.97784540949649
Merged-chr18-82815873-2	2.77367194415997	0	1.40335594376439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140611804-1	2.19684166729518	0	1.41447395157413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7845035-1	3.39059552903171	0.92977715083876	1.22374487622548	0.759780219637419	0.447385968417948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.44790810950236
Merged-chr1-39906226-1	2.42102024370114	0	1.41388125522619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24457499-1	4.63176000642112	-1.05052826223726	1.09473055257619	-0.959622675885949	0.337245152283826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.67591700901439
Merged-chr1-128618093-1	2.55086784537344	-0.303338883819528	1.32838784103539	-0.228351144484351	0.819373267117248	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.27743081564928
Merged-chr12-100492805-1	1.01985240681293	0	1.73574502347487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48779629-1	2.22626409249956	0	1.52179350104351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62336802-2	2.73361741874842	0	1.41828880438691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-104936915-1	0.984355592377556	0	1.57369820487455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191488631-1	3.13246894638034	2.84631803024104	1.37280123904957	2.0733649921613	0.038138324375707	0.492905652577046	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.94927122251658
Merged-chr8-121851893-1	3.71561118841033	3.11094130837379	1.18066101487732	2.63491490713534	0.00841583781643068	0.17919174612744	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.12633668835853
Merged-chr2-52606193-2	2.96895315059377	0	1.43625111089491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86568629-1	2.7034920073805	0	1.40646309711441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7145935-1	2.12931498326594	0	1.62408214297088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19498479-1	2.70265354127185	0	1.41144527270619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110919431-2	2.14359294553654	0	1.45799930959718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98580513-1	2.17384099108577	0	1.46988630942678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45770193-1	3.13523411518295	-1.66200835968622	1.47725008907745	-1.12506905362528	0.26055977370921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	0.413263464506793
Merged-chr1-133135043-1	4.15161355932818	1.11605079542019	0.963870653345543	1.15788440237955	0.246911213530375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	2.34407075892003
Merged-chr1-174239954-3	5.57035354257556	-3.93581450474796	0.929625639251361	-4.23376285955014	2.29813279290765e-05	0.00175455337766386	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50695243859919	0.67591700901439
Merged-chr2-43794126-1	2.70272526978686	0	1.45083920962909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16326853-1	1.66724081950736	0	1.51871539096952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85462966-1	2.88259988060315	0	1.44297442400476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33992538-1	4.35835734666208	-2.37216819608491	0.88947729030895	-2.66692384609501	0.00765490151842889	0.167315155464526	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02459586351641	1.20194974038739
Merged-chr4-141680179-1	6.62701621819779	-0.691610520613432	0.73649492088693	-0.939056741600545	0.347701612574574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00242619524776	2.68143774559157
Merged-chr1-194999675-1	1.96428324027965	0	1.45941845080973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89200923-1	2.30093216349145	0	1.42132843525409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44046697-1	1.68488064133413	0	1.54709264783218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17568626-1	3.51739969503467	-1.2752665711389	1.22564542564596	-1.04048572650347	0.298114292035596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12575163045538	2.37165617353846
Merged-chr18-47998129-1	1.55879102333868	0	1.52306615795162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-14408320-1	2.80185379758624	1.08639869035477	1.26310074269609	0.860104545608806	0.389731415739456	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99186294665078	2.52798402943088
Merged-chr15-84975872-1	1.48116632548628	0	1.68379761052335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41199089-1	1.4155955713839	-0.683618410171665	1.47943713050344	-0.46208006820745	0.644023903070325	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr17-42898214-1	4.17641671978289	2.29383649996239	1.15046739732574	1.99383007749234	0.0461706273997073	0.559345179297054	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.62575521944423
Merged-chr16-16473567-1	2.37963472356002	0	1.44262275455765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99113871-2	2.50976358938679	0	1.40888855833075	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128941399-1	2.34080912470409	0	1.42576268487619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99229719-1	1.04619791261149	0	1.71855417247721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73419463-2	3.66136690518749	0	1.3708263473521	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105507509-1	1.26526318017065	0	1.75620196159261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56479562-2	3.30961024837162	0	1.37544744788387	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104410435-2	8.36648718739225	-0.765927728257446	0.729813404593742	-1.04948432494715	0.293955265909914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35651348678689	1.97656658922368
Merged-chr19-29370701-1	1.86811360474294	0	1.43421119483444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10701329-1	2.53130252000959	0	1.50016554440663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80417840-1	1.57492029701407	0	1.61813336286342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45652238-1	4.87382435077074	-0.255575611725515	0.828742930098921	-0.308389492619876	0.757785976301977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68622000886725	2.46052538094855
Merged-chr19-42100479-2	6.15906296860935	-4.24259596139707	1.02744581372897	-4.1292649254165	3.63924875677262e-05	0.00253948553490889	C57BL6J_F1_Control-BALBCJ_F1_Control	4.31049639136878	0.465515277017237
Merged-chr7-82816440-3	8.45306520243491	0.975987800194423	0.715068546501368	1.36488705169548	0.172288552531711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80505986605703	3.24784007295384
Merged-chr11-120612856-3	4.64166479750819	0	1.38304524279746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9575771-2	3.8559328753045	-1.8853984382532	1.29037831621067	-1.46112067644617	0.143982326873075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr11-11667708-4	5.21756074211943	0	1.4025909194129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90632208-3	9.53319712193935	-0.202483530746856	0.632325826409051	-0.320220244516581	0.748801377648049	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22636190170969	3.72694529949001
Merged-chr19-9916135-5	9.617365567824	0.181251519706463	0.480255110437185	0.37740674855384	0.705871352450046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45339834539575	3.69091299573638
Merged-chr15-5457653-2	3.21784418223836	0	1.45345906578157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84387432-1	2.10503349660622	0	1.41960394894716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66175875-4	4.62594670284314	1.80902088630846	1.27852275792987	1.41493053220073	0.157088864921732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr5-101239619-4	8.52471569670297	-1.38810884448433	0.754169466131371	-1.84057948090215	0.0656832069707721	0.705166378887722	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32275364653448	1.90216338684418
Merged-chr14-41033560-2	2.78581835781111	0	1.42380078141894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80953110-3	5.26547330978795	0	1.39532057850684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5705171-3	3.53321080191372	0	1.40452803885984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105296335-1	2.97988787561321	0	1.38267048536029	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17411224-1	4.93276722621003	2.04790977522531	1.18505636432933	1.72811170579579	0.0839681992328234	0.817667284292425	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.4479225375093
Merged-chr14-17873803-3	3.94774902256447	0	1.40812540727007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114965094-3	11.9237001732691	-0.346722863498266	0.511742773530413	-0.67753348250781	0.498067533663787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.70437415491731	4.44895968306184
Merged-chr3-81061447-4	8.03605934957466	-0.383686470402947	1.13009112731934	-0.339518169046315	0.734219412156965	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.723581231604105
Merged-chr17-17392025-4	8.63269255539342	0.738178837501902	0.606814900053462	1.21648106768121	0.223801718776532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42084011709702	3.45658327330931
Merged-chr11-44410677-4	3.89776773099903	0	1.42102371536382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32707558-1	2.25067307753633	0	1.43288099981225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79293594-1	5.39721411860106	1.36190509441686	0.80983677787144	1.68170319208824	0.0926264087528479	0.866465987312787	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6950503635711	3.03161581924467
Merged-chr5-64615030-1	4.15183407137398	0.883169699752662	0.771746345153138	1.14437820833141	0.252466821573617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58115091314687	3.16738396458542
Merged-chr18-36707725-2	2.73043897104306	0	1.40426019696896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83330475-2	2.84009173371701	0	1.41038939716773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116146385-2	9.57710742446045	-0.878269230599769	0.592886137119491	-1.48134553266298	0.138514520954887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97010300994756	3.00539428269665
Merged-chr7-66661773-2	3.91306433091518	0	1.42337358922289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98542780-2	3.52200806701146	0	1.4116927574255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137938703-1	2.42826732923209	0	1.42528427984871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189927840-1	4.25303261767544	-0.575895719351274	0.832693766045565	-0.691605657246821	0.489185007984801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63394510410042	2.03872529540083
Merged-chr1-193839030-2	2.97249514495523	-1.26826324428431	1.41003347121945	-0.899456126518379	0.368409754950169	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr12-85758999-1	1.93207114246736	0	1.46912224669783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58232835-2	2.48633201467047	0	1.46022036904181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155168086-1	3.05428303640138	-3.83710701663647	1.16706486092929	-3.28782670534792	0.00100963966755697	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31711242604998	0
Merged-chrX-48425481-3	5.17648240237263	0	1.36357712138595	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90262731-3	4.89882495872669	0	1.37487878395353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157764009-2	3.66204975305608	0	1.38697678758436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-51090775-2	3.2263765686858	0	1.421909315584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135811511-2	4.07033303433084	0	1.36994381853042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61650487-4	5.88954466547103	0	1.36049867813622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97386310-1	3.54914477474419	-0.563890592874844	1.24048774997274	-0.454571673833327	0.649417417144518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.577068348605183
Merged-chr9-69518447-1	1.73611658704511	0	1.46597615167675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120577095-2	5.16037035538696	0.912061205494829	1.23148636612836	0.740618191626622	0.458924974708936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.765562747387088
Merged-chr17-27037787-2	5.95455126964011	1.75310321081816	0.725880862547815	2.41513904177723	0.015729204027286	0.274750578958624	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	3.50455011451237
Merged-chr5-113667565-2	2.34454531359288	0	1.46331976834049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104173144-2	8.03605252018246	-0.161454534212481	0.607558078429268	-0.265743374904821	0.79043685570692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85971213640217	2.73829335500344
Merged-chr10-77509818-3	3.82542666249811	0	1.38399885606982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-114982768-5	9.54743963188918	0.1278588464458	0.713233418778565	0.179266482864422	0.85772846330257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	1.93960303562856
Merged-chr8-68092862-2	4.75296907964793	-0.104290530912338	1.01065154336962	-0.103191383416506	0.917811078441751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.730937814817307
Merged-chr10-39771862-2	3.41516630829054	0	1.41390829689261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99469260-4	7.44940887441316	-0.213684240422137	0.869730464394215	-0.245690186983358	0.80592206905939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.30139522650344
Merged-chr14-61804005-2	9.90663572572928	0.502500375982974	0.638094970761194	0.78750091915555	0.43098869056698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31390960203194	3.96794627920892
Merged-chr15-78754338-3	9.56804014561942	-0.39609258557033	0.507047213063083	-0.781174958397911	0.434699599812064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91189992775539	3.62718690422524
Merged-chr3-96066274-4	9.49072709386416	0.158272738734827	0.740899609917384	0.213622380976116	0.830841544764256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43067782037622	1.57012720747844
Merged-chr6-47779544-1	1.67965797282366	0	1.65066306114136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112501316-1	2.34466315198566	0	1.41215633609861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4981469-1	1.91293548288538	0	1.48567203012272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76035036-1	6.55118874889896	0.0262369935740292	0.867148567321024	0.0302566302508992	0.975862384768719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69807084469279	3.03053917852925
Merged-chr14-16373979-1	2.09355876840833	0	1.46009918473709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23350661-1	2.95437944398208	0	1.49563845697704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43398386-2	2.04840218236075	0	1.52102556464557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53883394-1	1.73137163165942	0	1.43953909733472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-87213278-1	3.31543828398842	-3.24580515454281	1.26528124757601	-2.56528353736453	0.010309152358887	0.205348190940542	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73752739441368	0.413263464506793
Merged-chr2-71660850-3	3.1640371286126	0	1.38415357638663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40446014-1	1.15632417709732	0	1.64431235141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60871091-1	1.80840661487852	0	1.52159319477724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124278394-1	2.31808094146769	0	1.4426734185363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73442236-1	1.78191566964794	0	1.49368188246474	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-59984132-1	3.36247271904895	0	1.42202122346042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128553557-1	1.86357873126462	-1.86061218028413	1.40305105441766	-1.32611865721193	0.184800397136667	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr3-116082672-1	2.25008772092139	-0.035512896222155	1.42245511127446	-0.024965916984429	0.980082149436116	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.376242425970964
Merged-chr3-109360959-1	2.01728839126109	0	1.47317414168959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90115279-1	2.3556907947975	0	1.41821092882388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50684862-1	1.9700971438833	0	1.60196040653956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20767385-1	2.32731373720448	0	1.49984053028547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107448144-1	2.00437133948019	0	1.50259038482907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153048311-1	2.74715108446684	0	1.47421975732663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-48624653-1	4.00097160292017	0.199708026293725	1.17799491385571	0.169532163462454	0.865378075712416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01972438135018	2.85979501555184
Merged-chr6-72936029-2	6.04727427193714	-0.264371056261879	1.0005474973208	-0.264226393019617	0.791605474839161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22584882463049	2.91828392457666
Merged-chr12-12244052-1	5.17837612289356	0.0813466313709305	0.918833107401526	0.0885325427606543	0.929453420495996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47008794786848	2.42693421555852
Merged-chr9-50907146-1	1.76680307130623	0	1.58192436514133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-87885487-1	2.33117844737833	-0.732735775999319	1.90534808367529	-0.384567933952478	0.700557555323847	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49176722630688	1.15716269587666
Merged-chr12-117403847-2	3.56340985806873	0	1.40031546207672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116311630-1	2.61362123336213	0	1.42966251719334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-13498898-1	1.2996775216911	0	1.49891168400394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150497887-1	2.2083765009465	0	1.48724309523916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80356844-1	4.07117319376191	0.326012213436593	0.856614691356555	0.3805820945241	0.703513369679637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24434414282593	2.10206186112574
Merged-chr18-84199397-1	1.73767567293682	0	1.49980877092448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81303955-1	2.70729976957539	0	1.40609884027461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47011005-1	1.65532572032316	2.348831528893	1.6931519671403	1.3872538168326	0.165364380307231	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.83058014540844
Merged-chr9-117927208-2	2.53365038071374	0	1.42316294046076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-151742499-2	8.44798336841271	1.45837160300438	0.745499047463885	1.95623536738996	0.0504374339947425	0.592770030980967	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64054795287913	3.81419121817806
Merged-chr15-30605961-3	6.08849517077824	-0.962906040838568	0.924988226181853	-1.04099275383562	0.297878911271206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	1.02186287315087
Merged-chr5-44457919-1	1.89753186157938	2.33662560134756	1.31215405122121	1.78075554404065	0.0749523948403047	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.74119652523597
Merged-chr9-109908278-3	3.65379529104552	0	1.38366846523239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69132146-1	3.28172454897269	0.45769349997955	1.30416760653602	0.350946839720411	0.725628230553337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.67591700901439
Merged-chr16-33261764-1	1.94582378153908	0	1.42907427046215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133679681-1	1.90964833936973	0	1.41786896488944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40866600-1	1.78953058569794	0	1.43363614981136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160213273-1	2.28250627359691	0	1.40358533903793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139288579-3	4.1891178808996	0	1.38216701159149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78942924-7	16.3710998879345	-0.169177734971249	0.552026926079901	-0.306466454766306	0.759249517064289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32746081551923	4.29738018414047
Merged-chr7-25205998-3	4.34971954273187	0	1.35839621535902	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85064979-2	4.15728654169686	0	1.40826459024691	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43460732-4	11.5039881177158	0.507466819701257	0.504766231774349	1.00535017550087	0.314728262406861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93621765520635	3.82894757913271
Merged-chr17-29514594-3	4.24637222574647	0	1.37329192108533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83159610-2	4.17761211983328	-3.40978049424562	1.16486951020726	-2.92717807820287	0.00342052966594738	0.0939548115771772	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33578942466974	0
Merged-chr14-103343463-3	3.96270626372519	0	1.39103121835283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88244472-6	13.0479476833757	0.315455304028388	0.417601160936441	0.7553985322287	0.450009893654713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82997882121795	4.11644649497191
Merged-chr3-105824406-2	7.0769790379348	-0.571591939195777	0.59428086044454	-0.961821214918832	0.336139419389983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13387427998699	3.0101931355486
Merged-chr2-168117361-2	3.94798259477111	0	1.37270915319921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8983313-2	8.48574427161109	-1.97488256875389	0.701973409949058	-2.81332959448878	0.00490313660633432	0.121458484846193	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63175124708093	1.33175291456033
Merged-chr19-37610243-2	4.24120235913829	-2.3523582037993	1.05437608899885	-2.23104282081444	0.0256782927022384	0.382109584725151	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87110181758271	1.25171540477662
Merged-chr13-111824358-4	8.77501518430346	-0.474156842278427	0.643389740898963	-0.736966743697095	0.461142573582037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40594141276558	2.36722986642015
Merged-chr5-77289867-3	4.85515316090565	0	1.40075290179582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34216759-3	3.99156997148154	0	1.37115682309258	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-151062119-1	2.39218033341487	0	1.41063239566208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139287647-1	3.57367891074827	0	1.40197613174142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45029653-3	4.2834815142632	0	1.43198374480925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-48812200-1	3.8043038677742	0	1.39492855846215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86339625-1	2.9302123238918	0	1.38170312940288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113007162-2	2.96857153732631	0	1.38760015685546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125587277-1	2.40005843901111	0	1.44303203882543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-161537486-1	2.56067903526881	0	1.40445738386226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47737389-2	4.60793407078867	-0.873921156208637	0.995986001205264	-0.877443212204876	0.38024595080585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56706844884727	1.18984215491549
Merged-chr3-146914996-1	2.89449591643926	0	1.42691204180359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119430525-3	2.88056463408676	0	1.44363923297012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99947601-1	3.26915798637166	2.71175568568396	1.23773564684823	2.19090053081138	0.0284589913282101	0.409785694448083	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.57989517605929
Merged-chr13-110953468-2	2.9164616012327	0	1.39413175775277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94190346-1	4.37890137422778	-1.43579100423019	1.04565603043816	-1.37310067788597	0.169721050358368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26008002381647	1.21469436624079
Merged-chr2-148575660-2	3.80018229461222	0	1.39180893418064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142901584-3	6.19948700344626	0	1.39605763120058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69421772-3	3.54960069303897	0	1.38918655991735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22952877-2	3.2527487281474	0	1.41958581108647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-13739020-2	6.58435475819192	0.140640023066116	0.660051440632022	0.213074336950841	0.831268981160284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06764662187442	3.33581122990991
Merged-chr11-3998150-2	3.76109344955038	0	1.3811959394675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44465605-2	3.4320806341969	0	1.4177836785144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68090361-2	5.32969801162712	-0.719308605776435	1.01393934656608	-0.709419757910103	0.478064030343161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63456068607048	2.43647206672967
Merged-chr2-145744333-3	2.84622115931992	0	1.44269549757477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125282522-3	5.45106059493642	-1.73213418073502	1.11735980432357	-1.5502026957052	0.121092873028084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	0.67591700901439
Merged-chr8-115626596-3	4.43339064719874	0	1.37957111099346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134083115-2	3.92267183663838	0	1.39727157659641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20256337-2	4.31009380442098	0	1.37116176636824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42860576-4	7.97205786287462	-0.158128745739204	0.684553626261972	-0.230995410253937	0.817318367704566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80825258413206	2.42804561681696
Merged-chrX-94142580-2	3.82345646094848	0	1.38376230485872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20220575-4	9.8488214615333	1.48627568296923	0.729204517793556	2.03821513265776	0.0415284227785708	0.520910791618959	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33215491628936	3.33279152283671
Merged-chr18-35745890-4	6.01543827223508	1.50024188130047	1.20054701726567	1.24963192588439	0.211434035067852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.10056930386922
Merged-chr2-16228293-2	3.98906576087828	0	1.38974279573065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23283196-2	3.23006313391795	0	1.39315332435136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44657662-4	6.08229893560571	0	1.35522788724925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73762526-2	3.51214176718304	0	1.3851885739927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108709717-4	5.05894073843234	0	1.35389846451156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-98348825-1	1.5984216035859	0	1.48957379048319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88230289-1	1.70106125466211	0	1.49668617132032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164952904-1	3.20025935226954	0	1.40416244515844	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103557458-2	2.48475707975008	0	1.45760682643662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125566292-1	3.32390460836345	0.403200402430071	1.17026377375989	0.344538053275499	0.730441683376473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	2.28358877055452
Merged-chr1-177742284-1	1.27600641782743	0	1.57863210395717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58188079-2	3.34431428683758	0	1.42488348327467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70432527-1	2.3865038304919	0	1.45063447568105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132589752-1	1.73658135611215	0	1.4487264985404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124331264-1	3.56034222429174	1.19209316368635	1.24286501669246	0.95914934258812	0.337483515988039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03415454436003	2.05106621012459
Merged-chr6-97284557-1	3.90289412325773	0.554086540040195	0.798919620886225	0.693544789181118	0.487967728105532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58701083057496	3.30591528801904
Merged-chr4-99019700-1	1.82870716510752	0	1.45610101563072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127709765-1	2.46823625188795	-1.73195085014249	1.92163793857137	-0.901288851233912	0.367434759927931	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8343012990665	0.88866493597531
Merged-chr13-52825102-1	2.07981776689632	0	1.48104819046777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8807756-1	1.72410394193553	0	1.47976295891531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62243072-1	2.72830847819557	0	1.40018340760162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122280322-1	1.79427182862082	0	1.48524192251157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144701951-1	2.26306282645798	0	1.41340764863079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99217521-1	2.37379008590571	0	1.43298524751957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13278277-1	1.85042890910496	0	1.43635297337436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-163294073-1	3.12838337210466	0	1.37458575446069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145131472-2	3.18556543165455	0	1.41873606308967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40015465-2	6.85786608815395	-2.59209363740338	0.966761502858143	-2.68121313244279	0.00733557787006713	0.161635459034852	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44005968409874	0.815004392037195
Merged-chr5-123372339-1	2.41278995409989	0	1.43365040816621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130544718-1	3.36333992846225	-0.171907032424664	1.06471402961942	-0.161458408213248	0.871732366945408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60416142635113	2.38240112196178
Merged-chr2-73372184-1	2.56275671752818	0	1.41563128070671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-102716057-1	1.47220180285814	0	1.5071658707776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50452158-1	3.13190800575573	0	1.42450127620677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40767294-1	2.64482246193312	-0.187196362272814	1.03174168017991	-0.181437239445606	0.856024391062016	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51621292071001	1.21849460895724
Merged-chr3-28103773-1	2.14755453231327	0	1.46222239347874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67463214-2	6.32186915121294	-0.723855824815593	0.819061021685073	-0.883762998911104	0.376824164188158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47008794786848	2.30950914716619
Merged-chr1-136255350-1	1.56060859739279	0	1.50769338199281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106146499-2	2.56037386111687	0	1.44031069960092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57653109-1	3.0206339556926	0.304284993955864	1.15718129058904	0.262953606691114	0.792586337525113	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61477032079243	1.45526469271556
Merged-chr9-111677312-1	2.92550938114324	-1.21293732887644	1.52090206640739	-0.797511789658872	0.425153858492678	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr2-122666491-1	7.41828964763048	-0.0205399491678967	0.799680949188311	-0.0256851800568028	0.979508444559774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62425180415541	2.34706616758795
Merged-chr2-45238583-2	3.61487288833409	0	1.37793446489481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181077555-1	1.04929579567381	0	1.5233617695458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62971370-3	4.22292108806758	0	1.42035261266162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99224916-1	3.69605917285434	0	1.45730835337152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65432463-2	2.50844605346298	0	1.43563099268924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22701728-3	4.78491111694097	0	1.3691782930043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9924734-2	5.86748944865716	1.57382499974589	0.891242639050071	1.76587713691902	0.0774164636767571	0.778619036152448	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.69536696930465
Merged-chr2-69707200-2	5.29241711969784	3.36055461327156	1.02540272046545	3.27730222106896	0.00104804125089402	0.0371869937058407	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	3.40931416109757
Merged-chr2-164470423-4	6.85115894794755	-1.18170011513733	0.77784331051844	-1.51920071710807	0.128711980882005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.315908400302	1.87428793457718
Merged-chr13-107825867-4	8.28959343646271	2.0454052278142	0.839294216638959	2.43705388082529	0.0148074728065789	0.264689054354759	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	4.02562085778543
Merged-chr9-100520748-2	3.27362475654353	0	1.41197610400867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17628411-3	5.03085567419238	0	1.39523721117734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67457756-3	5.69550085265264	-0.0377611814784422	0.894221409598006	-0.0422279997695622	0.966316941874788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65215194967867	1.62830504494315
Merged-chr16-39193467-4	8.81200889599294	-0.25446161713132	0.562218731613534	-0.452602524289845	0.650834980763227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94646460166749	3.68781980158767
Merged-chr3-79060222-2	8.3213635139227	0.33708309146969	0.68067190651191	0.495221101744989	0.620444056787138	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85419949900662	2.60690088222384
Merged-chr12-85395887-3	3.62315193618275	0	1.37583256935434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-121469553-3	5.48462174840013	-5.51544259784437	1.0603253204746	-5.20165131525451	1.9752555525991e-07	3.07658786772878e-05	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25238463739553	0
Merged-chrX-47992847-1	3.12644018744659	0	1.4142830056928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24913191-2	3.69265609546013	0	1.39063440710931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119264011-2	4.595915300635	1.73959893861292	1.37188762419148	1.26803311578683	0.204786124738341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.859510663435501
Merged-chr17-24006398-1	9.63318299177773	-0.804619850007581	0.566041360710542	-1.42148596526154	0.155175530825193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03215378445536	3.16107115018846
Merged-chr8-127443763-1	3.57270771266309	-1.26560634159285	1.12644612299826	-1.12353916956471	0.261208574706247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73830414206781	0.577068348605183
Merged-chr15-98417383-3	6.13543138877404	0	1.35807664966541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-46022760-3	3.6554268208785	0	1.36965056998682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79443638-4	4.67560451190476	0	1.36665511061954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95834728-1	2.04149007028535	-1.73023637928877	1.38836809466977	-1.24623749705248	0.212677216669981	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40590822918039	0.71701424649985
Merged-chr1-105978405-3	8.56374552021428	-0.237393009115515	0.836746674840796	-0.283709533904849	0.776632987832392	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	1.59173462754619
Merged-chr18-24050064-2	2.85955871149517	0	1.4237450944524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173186520-2	3.85669768036931	0	1.39822966000832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45039632-2	6.76581489093163	0	1.36809855222738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30806136-4	7.84065508373657	0.312925084617156	0.638749160379269	0.489902929079939	0.624202590252972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55996558715718	2.88924402349358
Merged-chr13-93778291-5	13.7557161976968	-0.437527363323664	0.451071932305727	-0.969972485512836	0.332060207052166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.67077172720535	4.31244694453612
Merged-chr7-102242249-2	7.74386197802988	0.707551219304327	0.674021818826211	1.04974527462109	0.293835242044405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31873226455329	2.84072901959422
Merged-chr11-117109341-2	2.54676911436117	0	1.40793354771143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68377930-2	5.61400486018478	-0.279337735553262	0.669965214046115	-0.416943640799289	0.676719631747382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52133424668802	3.10369515882236
Merged-chr3-132070951-2	6.55576670158765	1.57300348578392	0.837350836071578	1.87854769831442	0.0603062783374559	0.668881653569835	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78734291970211	3.36628360146013
Merged-chr5-150116385-1	3.4441508382893	-0.181822590562389	1.02445079657709	-0.177482990076143	0.85912902508313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	1.50549197367979
Merged-chr2-166675608-2	3.10259640877124	0	1.40466142909157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52190862-2	2.05691237568928	1.84939064621677	1.38143516008867	1.33874589242253	0.180653410657053	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr2-172399449-1	2.63851549664748	0	1.4248531090693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32502657-1	2.15578740158114	0	1.43337492188168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127889613-2	3.97909925763326	-2.2934394537921	1.30028468845273	-1.76379793914298	0.0777660046099624	0.780586176252539	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0
Merged-chr13-41597681-1	2.96718363969949	0	1.45017773494382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41356953-2	3.4202132416204	0	1.38808730537692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58907339-2	4.13460776237632	0	1.36536216927135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77287027-1	2.62054911028063	0	1.45260649073247	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150438822-3	8.04979312990839	0.180145429852348	0.734397709355047	0.245296829711728	0.806226606305015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36809407398891	3.00215713277005
Merged-chr12-82189989-3	4.75246189190825	0	1.37662612854678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26451354-3	7.76506455425382	0.260089660731886	0.679186736771922	0.382942785320066	0.701762186862569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	2.52537298537352
Merged-chr14-61697267-3	12.3798113459718	-0.144523438122216	0.560425005150687	-0.257881851798095	0.796498091427741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57248311365864	3.20333707491955
Merged-chr1-33982168-2	3.61471830565839	0	1.40627156974741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91357714-6	11.7074398739218	0.611032173491562	0.518593160515706	1.17824957985164	0.238697122058204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2519504323942	3.93088038484748
Merged-chr17-49936005-3	6.27029897909864	0.438411826958078	0.869953334634087	0.503948671157723	0.614297447160239	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.3626301568499
Merged-chr8-30718210-2	8.88617432002251	0.24769551112731	0.546548948651972	0.453199135664308	0.650405354793616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51526178553468	3.92608533512115
Merged-chr15-59568007-2	3.09764196448861	0	1.39204933756467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46552665-2	6.07450274963379	0.482029446244512	0.75820970925609	0.635746865754925	0.524941424607829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46457184829104	2.99681667832701
Merged-chr3-115861006-2	5.62125676087585	-3.18171590263281	1.11633068415202	-2.85015537761525	0.00436978763445074	0.111752980329227	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85545068682378	0
Merged-chr10-61536576-2	2.67761606298439	0	1.4036145744167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114305629-2	2.38118096676065	0	1.52429460979937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47335037-1	5.28906009827997	-0.50619004521058	0.7451028196196	-0.679355965219681	0.496912343874842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21565186750098	1.90216338684418
Merged-chr13-37946963-3	4.24451475983525	0	1.37759730533686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119067808-1	2.50457296469237	0	1.42027444689045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134133048-1	4.3406665033359	1.2901301690691	0.917127905429305	1.40670691779376	0.159514313582539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03415454436003	2.56962857856503
Merged-chr18-84092704-1	2.52482358418155	0	1.39791848502678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-158209313-2	3.80871416190789	0	1.37629495228069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37502705-4	7.24147269421322	-0.171447810191243	0.796302913456171	-0.215304763167464	0.829529716241243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91157833022862	1.85449916425446
Merged-chr6-39778093-1	2.62572686603801	0	1.38905781667539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172412485-3	8.5758019955817	-0.282075936277582	0.676619048306827	-0.416890326962343	0.676758629135166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25530669400333	1.57419384977718
Merged-chr4-3774182-4	13.7211535656818	-0.634321119049035	0.501769663391771	-1.26416793466801	0.206169757248984	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5379075462172	2.64862660097364
Merged-chr4-122859285-3	4.56594870983176	0	1.37730592299995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76329178-2	4.22914095441239	0	1.38431769497462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56064320-2	3.75147155367711	0	1.3959321732886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20651237-2	2.47320308521823	0	1.44442537359186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47311666-3	4.35938501565866	0	1.38207890674918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116052878-1	4.1996179924246	-0.180762070955679	0.990069068619536	-0.182575212866429	0.855131334676663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15554725514874	2.21347085688945
Merged-chr18-25505261-1	2.3017868038268	0	1.49527618726121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131029891-2	2.69880039924075	0	1.46702698216585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111157776-1	2.30568282779541	0	1.46991652240004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31890832-1	4.21372078387889	0.69677962738643	0.840807183892456	0.828703227963324	0.407272358759344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	2.11005512232597
Merged-chr5-122343112-1	1.86337255347409	0	1.48605876320884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169874124-1	1.40880040108455	0	1.6067584347283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120472874-1	2.07616631759657	0	1.44423814599134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47287883-1	6.19983902628813	-0.076337491558108	0.833239280376283	-0.0916153299009556	0.927003671175735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93167434475395	2.91672342845487
Merged-chr16-58453935-1	0.971152053498586	0	2.34686640644638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160617416-2	2.87271725864267	0	1.38832134025417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-77045505-1	2.67990892544348	1.8350362661387	1.32909649941356	1.38066443403348	0.167382161644417	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr12-17377262-1	2.32950485297572	-1.2632850936556	1.44189683418708	-0.876127239968469	0.380960865680402	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.577068348605183
Merged-chr18-11695619-1	2.40182350575472	0	1.43808044140051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8363458-1	1.71700577182892	0	1.66139637036601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101800478-1	2.54349026530566	0	1.43056190903935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-87938526-1	1.56185289699757	0	1.64902076720098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8206420-1	2.55710027759759	0	1.49920629768588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-66890903-1	3.20727738501801	0	1.36928445856922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136547314-2	5.23045162920576	-0.548094583681352	0.640807889362449	-0.855318095766051	0.392375072292077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59267025540811	3.12366369866347
Merged-chr10-95678406-2	2.93563463809372	0	1.43394400477649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88047535-1	1.44931591206481	0	1.46732298948817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-63471732-1	3.27336409159165	-1.85448876458962	1.19526169067037	-1.55153367590115	0.120773843511998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79141544974979	1.39949824061849
Merged-chr2-45581173-1	1.80645711913174	0	1.46818640164027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9758530-2	3.9923234935007	-4.48233675342074	1.23365807030815	-3.63337043002613	0.000279742954339379	0.0137740464265709	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36985748385833	0
Merged-chr2-117303558-2	3.34180703241661	0	1.38732718430969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-82947148-3	6.4592154594029	-1.5047801034853	0.9957336780383	-1.51122748650007	0.130730501648779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.09266895777963
Merged-chr6-143073549-1	2.40465652496308	0	1.45350176231823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117554379-1	2.51944869314529	0.230880236838058	1.38558954872274	0.166629603298385	0.867661499270453	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.724326877898254
Merged-chr17-29495194-1	2.03517839578473	0	1.53878470524628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88845566-1	4.39048815544099	-0.670814953254077	0.8272872693044	-0.8108609646781	0.417445519366656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58347586254265	2.19776446004195
Merged-chr15-59517022-2	2.81195652823497	0	1.43885262558563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124623036-1	1.35448546714664	0	1.62501367698168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54649214-1	1.82491840737728	0	1.64683373672877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107628520-1	4.14224838116762	-1.22418762548186	1.16482579111912	-1.05096198488677	0.293276049827794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33594757742411	1.70781795390812
Merged-chr5-21130536-1	1.44831174849294	0	1.50249649086111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83764733-1	1.48920939826306	0	1.70351995471154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14183346-1	1.9696858428312	-1.70940299993443	1.38474534129111	-1.23445297049392	0.217034161026296	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	0.465515277017237
Merged-chr1-24688366-1	1.52372169185814	0	1.56445462142953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55641648-1	2.08710191122637	2.25904863962062	1.50351691944693	1.50250962287249	0.132965544636235	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.815004392037195
Merged-chr6-37355590-1	2.61268335391609	0	1.44483230699753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19724148-2	3.53125774955261	0	1.38530143993729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122312255-1	3.04408179631377	0	1.447057505705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5054304-1	1.52348388070605	0	1.50623060511822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99317604-2	3.92094672210225	-2.23352123466034	1.25526426256516	-1.77932352674177	0.0751867359731775	0.764940254682005	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	0
Merged-chr17-67583607-1	2.71746677734827	0	1.45192892429694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118295688-3	4.64389500378233	0.44516126547679	1.26392363181544	0.352205824997022	0.724683908779479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.859510663435501
Merged-chr5-143817202-2	2.85723182084802	0	1.40908241452414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54526291-1	3.91111946066514	-2.74880341586585	1.08595846325726	-2.53122334681291	0.0113665444969091	0.219415480222828	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0560776536823	0.990919527803163
Merged-chr12-102065122-1	1.59823246404092	0	1.51860525012612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150031538-2	6.54020604627457	0.0669844024435779	0.891831946409283	0.0751087721327682	0.940128168389217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13882690918841	2.1496486731129
Merged-chr1-171871934-2	4.37431141481698	-0.0350311901584646	1.15079795725256	-0.0304407823612224	0.975715520293156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr1-138239779-3	4.20652331079162	0	1.40934185173003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146095947-2	6.10585758173251	0.564731934511498	0.97242158272034	0.580748046471435	0.561410274726547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.46460328489499
Merged-chr1-171619823-5	12.8960917822441	0.0508840929338316	0.527961212300871	0.0963784682440538	0.923219992357651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75604463995231	3.85181650781505
Merged-chr9-62373935-4	4.66099207358296	0	1.3727655754395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61314184-4	9.36750526435531	-0.0371304381946164	0.579646702771676	-0.0640570161394365	0.948924827667759	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14282195505218	3.11644726602024
Merged-chr14-65336987-2	4.96905720700104	-0.0616395563603335	0.719383240892902	-0.0856838926131031	0.931717706865532	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00982473409987	3.02657581473643
Merged-chr15-68066827-3	4.88518968763006	0	1.41038629780338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70979797-2	3.96493641940757	0	1.3774098847753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32770090-1	2.32286666701479	-0.0349696448349432	1.23006359597493	-0.028429135655565	0.977319886695411	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr2-11254127-2	3.01052077724939	0	1.3929552465785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5200102-2	3.27081562197167	0	1.38947119718265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66240549-3	3.21756388642483	0	1.3957009343131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38633727-3	3.37604188752681	0	1.37634808159497	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113619305-4	4.38067166847203	0	1.40948310340175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86063682-4	4.71499964060508	-0.0340023034221044	1.30441769690321	-0.0260670362743686	0.979203869365911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr19-16009849-3	3.97008392621667	0	1.36598513929706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106631184-4	11.8982786098226	0.0294225698568345	0.763764229595345	0.0385231053206342	0.969270609772738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78354948518999	4.53750153010954
Merged-chr15-53585319-4	4.19950950824757	0	1.36837439413062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171634651-3	7.79075537008689	1.51661315401631	1.02710089528283	1.47659607832265	0.139783943587756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	1.98421894835306
Merged-chr15-87083123-2	2.52916517714937	-1.35752140030047	1.4787995896022	-0.917988759156771	0.358624750853309	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr2-52605558-1	2.44623735793201	0	1.41883269711702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-115368513-1	3.53770440347029	0	1.42203765143525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-18968549-2	3.84050033710731	1.3182105040664	0.914923097665028	1.44078831043899	0.14964449689671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	2.32784268624641
Merged-chr9-113782375-2	2.76578889656857	0	1.40572328596103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95479104-2	1.81100114318388	0	1.55438611692408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6769676-1	4.98775007799363	-1.59204950870005	0.865857069148699	-1.83869782372435	0.0659596436975862	0.706781051006719	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27331056990106	1.56533893459231
Merged-chr1-170844662-1	3.54191055520782	0	1.3931814704971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107788773-1	3.34699316568018	-1.44783037214032	1.11306170034259	-1.30076380464325	0.193339314869839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69442907999601	0.990331813111976
Merged-chr17-33562127-1	4.21563270326175	2.52103828434208	1.31242853387136	1.92089566729062	0.0547448621121751	0.627293094987922	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.88866493597531
Merged-chr1-182376362-1	2.12315953512239	0	1.46146842078935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-127027487-2	3.90881996674518	0	1.39826598217642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54733675-1	2.30635597930285	0	1.41696677994778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43849458-1	1.82681037914274	0	1.58207819360678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51838696-1	2.51695879971721	-1.13199206357646	1.24683664538413	-0.907891236407885	0.363935688183817	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2972429702454	0.577068348605183
Merged-chr13-91132971-1	1.72803279048236	0	1.51751960677513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-105849467-2	3.57047450156788	-0.0336747873406663	0.978430215471577	-0.0344171580233098	0.972544501453015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	1.41437199749648
Merged-chr14-65069490-2	5.69680063777721	0.746886881235509	0.87188767664092	0.856631996581261	0.39164829673768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.87992225432364
Merged-chr8-126643753-1	5.30791002145696	-0.0341580516674904	0.830059663194714	-0.0411513210219416	0.967175260967633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7333888787925	2.70999658019373
Merged-chr3-84868228-2	4.66747652343672	-0.351163686532243	0.793971810313345	-0.442287348204031	0.658281284996663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05271282077275	1.95643667806882
Merged-chr17-64771547-1	2.81769481488836	0	1.4583945365393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-21272314-1	2.00516824548781	0	1.48065123993442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128705871-2	2.82497492573795	0	1.46592820859801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10284769-2	4.0343352175996	-0.0379914184582024	1.18403724026081	-0.032086337461678	0.974403198927414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr1-92775545-1	2.38359308912415	0	1.48483519943754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26127660-1	3.34233790531115	0.0626782458944898	1.03428405397656	0.0606006112668058	0.951677286700159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	1.4068548238317
Merged-chr13-42061055-2	2.43815413029046	0	1.48114919436112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119445344-4	8.8783047503033	0.0195145140210058	0.741410648738895	0.0263207900428718	0.979001472598576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34406092952584	2.51723798352843
Merged-chr6-47781268-4	11.5206174103992	0.00809792690075697	0.494341364866302	0.0163812447759599	0.98693024224356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96334521664347	3.98720305404809
Merged-chr4-141644383-4	16.4859074425692	0.56824325008591	0.549437614482318	1.0342270625598	0.301030025372569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.90606374911554	5.12171516876928
Merged-chrX-167195557-3	4.54536554431185	0	1.39941792746875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55235687-3	5.32320142395769	0	1.37795517995212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24643176-2	3.42074171949089	0	1.40283252673473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3728992-5	12.6556867826333	2.299974411119	0.84441957240583	2.72373413203362	0.0064548445373501	0.147428106809166	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	2.52324159010177
Merged-chr12-102398693-2	2.58496560711135	0	1.47214359680312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51247605-2	4.01010702093694	-2.59979023414568	1.24509785363036	-2.08802081423996	0.0367959571627278	0.4818327400012	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37868783856218	0.71701424649985
Merged-chrX-166923240-2	3.86794332841752	0	1.44029055482964	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127318241-1	2.83142927705455	0	1.39789946869881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25826644-3	3.64325832768544	0	1.40241659533225	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-112034845-5	8.85766695284909	-0.23558263504159	0.684151427127242	-0.344342824849176	0.730588481645971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38501482800057	2.06657146692739
Merged-chr7-6241068-1	3.16423991021071	0	1.39745659778205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43290078-1	2.18264197779023	0	1.46266550668745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82835827-2	4.09292078523083	0	1.37983930993498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99497260-2	3.44342479918558	1.28421585833568	1.43729730384832	0.893493541591729	0.371592929204281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr5-112973815-4	4.71147720523831	-0.697003624024324	1.35756367789089	-0.513422416477132	0.60765586836086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr14-21973282-3	3.99994489610183	0	1.42744754224543	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74252885-2	2.90395421827561	0.619388520144773	1.41918922095918	0.436438292369604	0.662518761405778	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr3-107160232-2	5.66794352776419	2.2443124095884	1.11838500631017	2.00674400758728	0.0447769275740719	0.548168309562519	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.70340695421451
Merged-chr6-134277129-2	6.01742928960932	-0.196674300053365	0.74740798753895	-0.263141822582027	0.792441269719825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14118653495162	2.11005512232597
Merged-chr1-173441272-2	6.60743046561745	-4.79836585664141	1.02733918301565	-4.67067346010916	3.00213849563346e-06	0.00032452326904688	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62542156834978	0
Merged-chr12-104178509-2	6.88690947068385	0.571082306250053	0.751651618169342	0.759769941879366	0.447392112944591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83258608720076	3.12079489793522
Merged-chr5-99602937-2	3.90197515394729	0	1.42251301482461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94277922-2	5.34607406933696	-0.234037696749279	0.731191373323956	-0.320077212734823	0.748909799309507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34738686477001	2.11421450580155
Merged-chr12-111878406-4	5.52669985417442	0	1.37733501095527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-37100407-2	3.91169050086312	0	1.37530403290084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55920891-4	6.17060857799312	3.91364426056595	1.15644498635323	3.3842027132716	0.000713852776041302	0.0278936678371371	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.26452078935009
Merged-chr12-17259550-3	9.37638964184049	-0.0943132056588412	0.581538484542777	-0.162178786384177	0.871165064651087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25076571746007	4.1047289339372
Merged-chr18-78161540-3	3.63194610025708	0	1.39027940466548	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135631966-2	3.26982981473448	0	1.43412046222021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3279237-1	1.5321979162204	0	1.7410428777317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58660719-1	0.905592857764265	0	2.016206107193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46639445-1	2.93669600499469	0	1.41104890526184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94811358-1	3.75324358640238	-0.138070783743453	1.10785392393565	-0.124629051502528	0.90081722793212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.4277097602107
Merged-chr9-5303135-1	2.55441550083069	0	1.5147007754446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11564456-1	3.30574213571454	0.997831351723349	1.19007885521791	0.838458180605723	0.401773425274683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.948471875794396
Merged-chr8-109039984-1	2.19723948454879	0	1.45169110593534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36318469-1	1.61842448709648	0	1.57062050893927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117821042-1	5.29989451085613	2.48617205394793	0.978710135524195	2.54025371119339	0.0110772080603717	0.215176026377593	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.43489205108266
Merged-chr16-15986766-1	2.77513212104656	0	1.42767055632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123084615-1	2.51838509628195	0	1.46366383712377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101812135-1	3.12119098296685	0	1.44272670560069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130087641-1	6.36825022988388	0.00368519657955048	0.634293028986572	0.00580992760623339	0.995364374543075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65104858140409	3.66981378487606
Merged-chr4-53352893-1	2.2799084263682	0	1.47250051030406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105978110-2	5.176969638361	-0.159457560557988	0.865108919690725	-0.184320791207416	0.853761804330309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87273782600692	2.41031217304274
Merged-chr10-120812206-1	2.79541458971764	0	1.4495175554226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8362788-1	2.53585133411759	0	1.58643263116376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16491930-1	2.95083601614627	0	1.40671142040852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103421213-1	1.7208419716228	0	1.61419301486594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118478369-1	6.8375862741197	0.155830694250972	0.638459279109866	0.244073035430277	0.807174255710875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59073590770748	3.68111968489558
Merged-chr2-29670851-1	3.64150146348807	0	1.39585835576665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78477436-1	2.35662999736078	0	1.40236218886506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97790247-2	2.49867325549778	0	1.46224670146432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122553279-3	3.64787958795803	0	1.37009719806713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136628951-2	1.99521022702636	0	1.60766436238428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133836795-1	1.89905387470985	-1.72991028634608	1.39880447748105	-1.23670628325502	0.216196145186474	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr8-127939382-1	4.96927842496914	-0.0349634309862077	0.956712215996619	-0.0365454003843631	0.970847478596825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.30064958020929
Merged-chr11-50108250-2	3.63469937824465	0	1.39190613150402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50171895-1	1.26269908412386	0	2.44622439638134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170173981-1	2.54738962228366	0	1.42711252633016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153526833-1	1.70230040109348	0	1.50374163349468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83847228-2	4.16573168651889	0	1.40537510971107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61133923-1	2.30878865962034	0	1.46136855245262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9793852-1	2.22624679500308	1.84766911724135	1.43368689785356	1.28875357653584	0.19748376991958	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr1-4768518-2	2.5722451485398	0	1.4458449506896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-60566384-1	3.8549546076185	-0.773513270242647	0.833717526169997	-0.927788184801726	0.353517454041967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97271790757793	2.75823713761518
Merged-chr17-29796341-1	6.76889565731733	0.26074850824665	0.698033396128087	0.373547325519084	0.708741129405826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22840787878693	3.46497134643469
Merged-chr17-52560231-1	5.76995796127192	0.573993723835743	0.793286433202887	0.723564276169767	0.469333279858707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95001597236927	2.7909242617872
Merged-chr8-70544030-1	9.12352767241066	1.39224992087108	0.588579650943716	2.36544012121176	0.0180086551969211	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4627422823031	4.3101893785749
Merged-chr5-74809196-1	1.36373628177729	0	1.56206077567834	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147913598-1	5.66440930423563	0.603702959138923	0.784623510702745	0.769417371394108	0.441645579378858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53834308931409	3.44862876948166
Merged-chr4-149838971-1	1.94988084998362	0	1.4779034439012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97534069-1	1.78180749158641	0	1.47695931335861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61208872-1	2.0876648445536	-3.95110349192205	2.01942744058839	-1.95654640147449	0.0504008219046919	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53986243698381	0
Merged-chr10-87777276-1	2.07467756682296	0	1.46645065188391	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152653172-2	9.76601859129991	0.768705857608993	0.498518391048363	1.54198094074812	0.123078225156318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3172217657422	4.1559566128091
Merged-chr15-79756533-1	3.86571873739055	-0.620242644810972	0.956321648799992	-0.648571163885355	0.516615599164729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84647978065702	2.09065778562608
Merged-chr11-34102021-1	3.86221102426842	-2.96412611417842	1.22036467072169	-2.42888554978039	0.0151453124631555	0.268959176799958	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64500873683875	0.303163067301871
Merged-chr1-13153556-1	3.9489035976619	0.360891904199682	0.795096203217897	0.453897154506697	0.649902851714003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0228459360188	3.10781822813179
Merged-chr7-127185847-1	3.13052491577881	0	1.42783605747906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35698627-3	9.89227900075716	0.282088763446872	0.578648527827435	0.487495862999926	0.625906973861493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31103015307393	3.61872158094781
Merged-chr2-18872999-2	4.23689741331323	0	1.36717684526003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33119207-3	8.53422149895403	0.363942745683659	0.590075741706068	0.616772932626247	0.537384507730716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82174406728113	3.76047627240546
Merged-chr18-52473559-1	5.35579663838323	-0.204544391515339	1.08182249331877	-0.189073894080207	0.850034901936853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77190077035616	2.60030758339423
Merged-chr3-109353220-2	4.3787231473693	0.955951830831748	1.11952217113692	0.853892719124033	0.393164434108183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.55528346522961
Merged-chr12-102494339-2	4.84334003949392	-1.29713814483117	1.09419101461781	-1.18547687515442	0.235828952507176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	0.723581231604105
Merged-chr9-64703717-2	3.32512191323861	0	1.39542392938675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80761360-2	3.10921066667001	0	1.41284167058752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73417976-2	3.69474615899056	0	1.39242938809379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17954232-3	4.79477106943425	0	1.40563633393352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-77781555-3	5.07541793835184	0	1.36429259163238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75394447-1	2.3186757792115	0	1.39519874733656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24539157-1	4.05240784560552	0.429859004907616	0.909669042251555	0.472544392456906	0.636538263192614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	2.29551975980701
Merged-chr6-47562640-2	2.97416061489574	0	1.41453868568294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47348793-4	10.5730660586364	-0.0417633988468194	0.606458141693032	-0.0688644375854692	0.945097525986641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18687214103025	3.85479286114598
Merged-chr3-108883749-2	2.60931870338954	0	1.47716662612555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55702543-1	6.84750550415613	0.255039696476281	0.856846241393164	0.297649314609359	0.765970831883389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65333376094957	1.96151817478906
Merged-chr14-103547876-2	3.81617617291033	0	1.3954039245496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45824620-2	5.04144074193189	0	1.40382993077322	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67250023-2	3.42546545270756	-0.484548813787756	1.28067425564862	-0.378354457935399	0.705167295226824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0.601513806634888
Merged-chr4-133490771-2	5.22192377972473	-0.0970705006085236	0.924497343826778	-0.104998138995964	0.916377285424316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97343951655824	3.33885738093693
Merged-chr2-84541639-3	4.74892550808924	0	1.37241789810115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90182227-1	2.7049123061883	-1.26898417100157	1.41490342117109	-0.896869815998647	0.369788388162307	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr3-79248922-1	8.05970715102399	0.421927361668376	0.827026461430301	0.51017395614969	0.609929596348606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40362431306977	2.80112922685374
Merged-chr4-106970941-2	2.65956323786315	0	1.42888900905789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5425552-2	3.40124867464617	0	1.45620935184436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3129869-1	3.01872699822607	0	1.49515744123267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77807513-2	5.07707031456107	0.880371111097991	0.984762185784021	0.893993619786569	0.371325304851876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	2.1881845164991
Merged-chr16-95732437-2	4.53494259508222	0	1.39132620859647	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82010797-1	3.3522622125922	0	1.39179056488386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135150647-2	2.97373723358439	0	1.42756647581093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20307501-2	4.2071615556726	0	1.37609786130282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18388855-1	5.37045331145692	2.04110861586116	1.01644397152625	2.00808767924151	0.044633975292764	0.54690117008617	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.70038707683037
Merged-chr3-142474619-2	3.64774040119994	0.229040983310567	1.00277665589264	0.228406776289264	0.819330021960649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13132003301738	1.19104000664357
Merged-chr14-121865346-4	4.99382444006363	0	1.35689865512305	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51266301-3	4.93730558573292	1.60612930022417	1.06602177278553	1.50665712579898	0.131898566547547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.62144175773092
Merged-chr7-64349859-2	5.08502523095936	0	1.400874550677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148375800-2	4.32477372393019	0	1.36731985625642	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149120089-1	3.04118775587699	0	1.41079389878722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80230181-2	3.65598110609195	0	1.46309897118827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19940008-4	4.46598595941267	0	1.36572658665132	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84592180-4	9.0114674015582	-0.0609020145082762	0.655642614716917	-0.0928890422026206	0.92599171116379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73686805410276	3.1742863600202
Merged-chr9-41052235-4	11.2758914606258	0.835354099458327	0.600133243788954	1.39194771845049	0.16393823032491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34911577852713	4.24911797109701
Merged-chr7-132690899-2	2.41013283520859	0	1.51450887128071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6836938-2	2.94872603904559	0	1.42444354958626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20691168-3	9.04488185394987	-0.0925584270929398	0.639444837226394	-0.144748102892525	0.884909758447191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1936022353569	3.78728554407699
Merged-chrX-57309449-3	3.95440391252903	0	1.42579462805704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193905927-2	5.35764865473734	0	1.41250216347094	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189701201-3	8.14620064695954	0.486853642164743	0.664526215060807	0.732632710539785	0.463782474859043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57151361581017	3.49879979246885
Merged-chr4-133609916-3	3.82125401203946	0	1.41237355418551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68145825-2	4.59158588859819	0	1.36372528200584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92697044-2	3.97631305850271	0	1.36114470575182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117081862-2	3.60040226953721	0	1.37360753466389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28310450-2	8.9211152552909	1.37154227913772	0.640256985523695	2.1421746426021	0.0321794312052969	0.442696283245026	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78836296612388	4.57157781369538
Merged-chr7-113759389-3	3.68212630135202	0	1.39364658412617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6098079-3	4.00194516979853	-0.694844007379099	1.37832299204103	-0.504122771941987	0.614175105577182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr9-50834112-3	8.51661241796839	0.12465122198844	0.536520177848284	0.232332775420216	0.816279557696179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93301441110323	4.07369049552582
Merged-chr6-6548240-3	8.96026133535671	0.950517171088007	0.577971925918724	1.64457325427545	0.100057846167704	0.911451133413967	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65406131798662	3.75460279580714
Merged-chr13-110972755-2	2.07194710019249	0	1.52343369480292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114081739-1	2.40898825730094	0	1.40816690979157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166746695-1	2.28655019448584	0	1.4196293024604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167982702-1	2.44751202626666	0	1.45702711368382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3368319-1	2.15439521099139	0	1.47821626831197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21015760-1	1.70005796405191	0	1.65161888397221	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58199605-2	3.44668768175403	0	1.38364525866622	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154318009-1	2.09509828915266	0	1.42045833471274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10399361-1	2.01098871254701	0	1.49635433369956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46452646-1	2.61158704195007	0	1.4377729307722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140742069-2	3.97540415374919	0	1.36399885044706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20475029-1	1.60850242742674	0	1.52161506103905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79475002-1	1.53905261575559	0	1.54801898796964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22853557-1	1.59262989989192	0	1.57288767670355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51911407-1	1.36596120101726	0	1.52535160672007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-104613205-1	2.99873324121939	1.30403675783878	1.54073224975494	0.846374675448114	0.397343761394815	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.13180270670924
Merged-chr17-87154621-1	1.41533520303306	-0.56244822830339	1.43704256560411	-0.391392879908846	0.695506854436876	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.878778741524029
Merged-chr11-75570448-1	4.61139465436473	-0.00104147664407136	0.723578745270709	-0.00143934112337934	0.99885157233646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73147877784577	3.67273445277784
Merged-chr6-113477355-1	3.1918306828322	0	1.38133166657045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6982578-1	2.11795442912686	0	1.43656299753268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-28202310-1	2.53905363214306	0	1.4440871821296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31027635-1	3.38230463485973	0.498619419999359	1.0366244337948	0.481002958973338	0.630514395711904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	1.92755195211066
Merged-chr8-39952230-1	1.93092216848345	1.39868164813511	2.06952968268974	0.675845173825803	0.499138950166714	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	2.14942183978066
Merged-chr10-40067349-1	1.88792977801979	0	1.6257627359169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-7703651-1	1.34339227166463	0	1.55262061642669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24910991-2	3.12492799431327	0	1.44334696544483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3788518-1	1.58353707317189	0	1.69970824256463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32486031-1	1.75969466437834	-2.78550984901313	1.26347599968498	-2.20464009582109	0.027479359803885	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0
Merged-chr9-123270191-1	3.00195361756308	0	1.40182010868377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64759228-2	3.08751136130738	0	1.41186817431899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120854901-1	1.16093061622455	0	1.68662439054207	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39608679-1	1.99605053255551	0	1.4882236911286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77327948-2	3.77859929499921	0	1.40652690435584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75833094-1	1.49212254139779	0	1.46437660538995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72821248-1	1.77939268465428	0	1.54327825091112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37761147-1	2.96706829531655	0	1.49101135207287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37880734-1	2.46356934554899	0	1.43440427678982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3512723-1	2.7509592825177	0	1.40187213643776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143834273-1	2.04797511687376	0	1.4441688976549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52066461-1	2.13536877210963	0	1.50049849107948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44437766-1	2.72215462839167	0	1.47213764940086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91258016-1	1.42174636882589	0	1.61385843381194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38773022-1	2.61073094823162	0	1.42732039283015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138178110-1	1.66333456572594	-1.35197183651095	1.5488902942852	-0.87286481263341	0.382736767555682	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr4-141675733-3	11.8862122483334	-0.181964323987766	0.590665351985242	-0.308066696948076	0.75803158163056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10935919273017	3.56795401559477
Merged-chr17-27053888-2	2.90587533509377	0	1.44178531849737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76805230-1	2.1845943646339	0	1.424607434692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12369162-2	4.24568395296808	0	1.39045746214016	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53372855-1	3.96991398288512	-1.1484414265811	1.04145563304627	-1.10272717352528	0.270145662499457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03247245696714	0.815775955292901
Merged-chr16-32880787-1	4.60581120704333	-2.53060011298614	1.06340364115747	-2.37971736699311	0.0173259211735649	0.292490605302428	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10412509212469	1.28129123231014
Merged-chr5-100579023-1	3.05491764457448	0	1.39395759375066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58766001-2	5.10201345152158	-0.633197269355153	1.34619863051987	-0.470359466277743	0.638098218348309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.41385117919798
Merged-chr8-67515977-2	3.34820929242922	0	1.38551603695811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79303441-4	8.16425535334513	3.30986463219006	0.872733659705456	3.79252546911864	0.000149122950512211	0.00815510509747813	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.96382778148085
Merged-chr6-99096239-4	5.1607019231052	0	1.37837347001147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-31766923-3	4.31287912357023	0	1.40222759337963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107947849-5	11.5463572450665	-0.676205099539807	0.479451429874689	-1.41037247446846	0.158429728638591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01859142748117	3.48861090625487
Merged-chr1-64318163-2	3.86518329034807	0	1.42546085514163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55800800-2	3.40156807604228	0	1.39096447076911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3328092-4	9.90550194957218	-0.295274100757832	0.698450744195316	-0.422755796613857	0.672473441581964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	1.90258199709273
Merged-chr16-50841873-3	3.60387687456374	0	1.43307610102762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83064621-2	9.48951922171898	1.21638881347518	0.643562778170954	1.89008571460928	0.05874649735053	0.657078364090012	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41751376042665	4.49804665179686
Merged-chrX-20798356-2	3.38166601811993	0	1.45009140230086	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98691048-3	8.36718823109938	2.86352069415995	0.877904283885247	3.26176867652037	0.00110719453837041	0.0388547371925611	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	3.01891767911879
Merged-chr8-11473920-1	1.56953842396076	0	1.50189369886836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15201366-2	3.18139500645493	0	1.40817787843825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104370276-2	3.33866083170962	0	1.44645628995226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38392323-1	2.42891857399328	0	1.40772656784141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25488280-1	5.65524042750337	2.74712666839365	1.07533711139907	2.55466554559761	0.0106289873103723	0.209416861618168	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.1825610668663
Merged-chr4-155549024-1	1.85309347438843	0	1.56992640643549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147389181-2	3.70513041423354	0	1.42701061168611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151011180-2	2.89981757701802	0	1.3909301841828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77823850-2	1.92476991660779	0	1.46246751402464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90627568-1	2.19177661073484	0.536505162453473	1.36887457308372	0.391931571381932	0.6951087748356	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.724326877898254
Merged-chr1-173414001-1	6.18085206344555	0.384154228572364	0.700801523927235	0.548164088484846	0.583579237981926	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1143152953673	3.24173410458277
Merged-chr14-45691012-4	14.0766874474285	0.723825920145269	0.405442603325408	1.78527346215841	0.0742169711997715	0.7593375376338	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28686997468324	4.92848989800877
Merged-chr15-5738323-3	3.69298738309292	0	1.382304920668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127376189-3	11.6764674482047	0.472392047938831	0.536347941246082	0.880756709611556	0.378449515307822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14053924827089	3.85927509912038
Merged-chr17-47795607-3	5.50005144784712	0.011578388884205	1.0502515360375	0.0110243960488638	0.991203982774839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.40024388691264
Merged-chr13-23598126-1	3.03105238025369	0	1.37904217817003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-8051388-2	2.48774965854905	0	1.42099801306953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85867873-2	9.11468407022805	0.206560879806709	0.617237673783703	0.334653713763903	0.737886321074029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5063626915779	2.71081058275469
Merged-chr7-29144140-2	4.82957487918418	-0.0303971111879513	1.19456068533121	-0.0254462678717098	0.979699006616742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.662147012823607
Merged-chr16-43805837-1	3.48673808753292	0	1.40621462205025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3472668-1	2.97130393531617	0	1.3978082588429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131110553-4	17.2323710920179	0.203006654358485	0.445894244773492	0.455279826411776	0.648907937709653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98390604826975	4.04361235055961
Merged-chr15-36540951-1	2.08696923749721	0	1.51119342417006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70604681-2	7.99578900497407	0.318113044381921	0.7103554403371	0.44782235247042	0.654281410236199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34310688897156	2.59315343324397
Merged-chr2-121309279-3	4.90238900644916	0	1.36179074617269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-16894629-2	2.58787488688628	0	1.54795255682945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36510398-2	9.72227926512715	0.342060825945149	0.789459733612098	0.433284702666318	0.664807950031037	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77743761853437	2.54548746396575
Merged-chr3-89319714-2	2.84046523521198	0	1.43503257206811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32187435-2	3.32495224721219	0	1.3912605875127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75791224-2	2.60855755002686	0	1.47378457341846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97368286-2	2.85120341953764	0	1.44168512458685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9493480-3	6.93626655101041	0	1.36894304356694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128769211-3	7.40051822049088	-0.734769720921674	0.638885353158307	-1.15008071055216	0.250110630357107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43358550291271	2.35237957254822
Merged-chr19-42477889-3	6.93669138813858	1.12243662148627	0.850704376676798	1.31942029717888	0.187028639795199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	2.09070350854821
Merged-chr1-155425966-3	3.4631400352062	0	1.44212898793288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72199075-2	2.96175598928106	0	1.40443748862887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142071758-2	2.60012435775138	0	1.42831629463076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94020810-5	10.6720508278239	1.1411137185007	0.643191919156504	1.77414187665352	0.0760396854774569	0.769728354351784	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95069994624477	3.77073916304939
Merged-chr5-43883155-3	4.89907967099499	0	1.38219499035105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44982989-3	3.78595273110229	0	1.38167893237611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127506241-3	3.37902171242679	0	1.3979520992446	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106362169-4	8.77751027015139	2.41486967875265	0.609924703934705	3.95929147183908	7.51724480804429e-05	0.00461728712452519	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93112180545279	4.56480844396555
Merged-chr5-136428079-1	4.62018893907219	0.444087297838264	0.827086095321872	0.536929952456088	0.591316000375411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	2.37740742799158
Merged-chr16-30365697-3	5.83545226585559	0.137642695263035	0.861112977066188	0.159842783617062	0.873004920892595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32267539517565	2.66777307363355
Merged-chr1-131293836-1	6.57458771114004	-1.02631180013812	0.783711230088785	-1.30955352014268	0.190346921008569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85587295448269	1.75191520103598
Merged-chr1-85758178-1	1.94225256523063	0	1.58811719555095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75699303-1	1.10596273198585	0	1.88141852270903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7222113-1	4.0619048360621	0	1.39333399431925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43361515-2	2.55988989639146	0	1.41621296649667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184048104-1	2.28960202258211	0	1.4556349176904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11145240-1	1.32239343566525	0	1.7333795881845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-124630844-1	4.6095137114784	-0.255673913428762	1.58303554410033	-0.161508637239138	0.871692809131393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05919858138889	2.86181451191696
Merged-chr5-75039471-1	1.06926789571372	0	1.84708711797403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100406285-3	4.91277824716193	-0.040016429521946	0.949327466463776	-0.0421523983404865	0.966377209425423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43750690265746	0.948471875794396
Merged-chr10-111564343-1	1.15439923276124	0	1.62415496738348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97007847-1	1.57401076835711	0	1.58829602323045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25080461-1	2.32589054904318	0	1.42841846579785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122575598-1	1.72479781118496	0	1.51694538505061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-6410164-1	2.28206422825928	0	1.56082707622102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24155086-1	1.41215695160947	0	1.68894395934477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125350548-1	1.83416004308013	0	1.44080440498361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34223258-1	0.927346970489696	0	1.83633117842109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67875938-1	4.47456693043509	-2.134656478405	0.95144640558828	-2.24359088001929	0.0248587365885453	0.372565773977594	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42139820021751	0.953310774576147
Merged-chr13-94106086-1	1.5627950548706	0	1.4975589877502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138885867-1	1.33036247176201	0	1.79284079764459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27273388-1	1.36400786596774	0	1.86652322324886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75127209-1	4.51510011344249	-0.0210687071590295	0.991100488483418	-0.0212578920138248	0.983039933546516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63828889185066	3.09088390158328
Merged-chr8-108692443-2	3.56714189562161	0	1.3868855921256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-110794714-1	6.728815560951	-0.231517110959973	0.634483369283659	-0.364890747603612	0.715192961181904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91972914370967	3.02661816507589
Merged-chr8-11163644-1	1.16604188610395	0	1.59548189557322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8648146-1	2.09909727918913	0	1.56977950982593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105622858-1	2.61057388633957	-2.04758689755045	1.25028370025114	-1.63769782581279	0.101484744393636	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.303163067301871
Merged-chrX-159995951-1	4.28802960701471	-2.17484543594206	0.866785510862753	-2.5090929747745	0.0121041620778993	0.229618605908138	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40942895253235	1.13341594473881
Merged-chr7-97822062-1	1.52673375431848	0	1.53391847121704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116985125-1	4.90451441071803	1.01141542535124	0.796071173901378	1.27050879181381	0.203903453148276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50670197153503	2.80690261264213
Merged-chr13-94941380-1	2.79049926749477	0	1.40890330103858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-119027880-1	2.62234714444375	-2.7216125726708	1.20016435010171	-2.26769989663511	0.0233475041672455	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30944904015933	0.41385117919798
Merged-chr4-123995730-1	5.40210257841949	-0.0284843126920412	0.899548491137033	-0.0316651219725097	0.974739109564113	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96353301543917	1.29741062002251
Merged-chr10-20948548-1	3.23314675846063	2.14343415185373	1.26934390852689	1.68861577816311	0.0912930850041186	0.858175039844829	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.06633037676026
Merged-chr9-41181718-1	3.1098552320877	2.05042196147609	1.23182039981299	1.66454619665933	0.0960033271665948	0.887222859817906	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.30064958020929
Merged-chr4-120851161-2	8.26707780945976	-0.0182078876364018	0.564971483632873	-0.0322279763915193	0.974290245828705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81338123068191	3.44960352851714
Merged-chr16-57532385-1	1.47247447271001	0	1.64056382238327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67859694-1	1.85999500158122	0.0832218980182336	1.59888452900011	0.0520499739091715	0.958488873929048	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.724326877898254
Merged-chr16-33190947-3	6.55644062087449	0	1.35822122927427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-109525774-2	3.37504487099525	0	1.4179524386949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74976897-2	3.28156189072444	0	1.41536359885263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81564102-1	2.76194013941092	0	1.39232365631862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92526125-3	3.75225597980262	0	1.37542289874732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23534440-1	2.82934002293114	-0.795968005338217	1.29500923333117	-0.614642725975579	0.538790691457915	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	0.904676873936758
Merged-chr13-89885347-2	2.76271877141615	0	1.46438798212841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103102583-2	5.32281710958728	0	1.36766824220298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31664943-3	3.76345569814005	0	1.38789105335837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104426070-2	6.73403734775311	-3.27767822318764	0.821962227953707	-3.98762633089296	6.67376686820421e-05	0.00417480041950646	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53193558978663	1.17882621189388
Merged-chr3-62496068-2	3.21023297341215	0	1.44390345785163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171051619-1	6.78059969390084	1.2036551520602	0.711841857379011	1.69090246602249	0.0908554322460365	0.856391614611115	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43884655774859	3.73982715628797
Merged-chr14-70963185-2	6.81499652411954	-0.0340484762503521	0.888020258804242	-0.0383420039270274	0.969415001101634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	1.45451904642141
Merged-chr6-82985220-2	3.00023180893634	0	1.37723317276299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72768406-2	3.93513562733614	0	1.42169623227785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58296491-2	5.1268649104488	2.71109810679059	1.18128744788988	2.29503675132873	0.0217310182167571	0.339935660214301	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.53201863853705
Merged-chrX-133927001-2	3.7942174618907	0	1.42466161052386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8913040-2	3.56030409354309	0	1.41068648144028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180863812-1	2.10551139122312	0	1.45629693984157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73517600-2	3.00007197131568	0	1.46599798779608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33778780-3	3.78049269139624	0	1.41658320266513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-18876186-3	13.0533501416622	-0.822084802331176	0.501193667045044	-1.64025377091864	0.100952413321822	0.9162919077911	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53677871952196	3.60993936794067
Merged-chr16-64865568-2	3.69026448104243	0	1.39132971017326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59723287-2	3.20076142923031	0	1.42685175475326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146399835-2	5.34469969501143	-0.927297483842735	0.93279014770785	-0.994111576029601	0.320168550223993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	1.11816745933907
Merged-chr6-41191117-2	4.68103100841625	0	1.41189389374035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66646428-2	3.50563847904147	0	1.40738453075743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46202347-2	4.00722379461006	0	1.40349587420582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46835792-2	2.9906677858476	0	1.40309992207593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22137955-3	3.52394882948702	0	1.38874759891085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61690355-1	2.94856956010151	0	1.47480416937394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46850743-1	2.44273906857308	0	1.46160171609419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105811305-3	3.61866039770291	0	1.36742251834102	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127457960-1	2.1184681293463	2.17296390605824	1.43684743353213	1.51231359387723	0.130454104438982	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.765562747387088
Merged-chr10-67696492-2	4.23502741144623	0	1.37274997956017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67088290-2	2.91615767194736	0	1.41029066541698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93240953-2	10.1402777285228	0.172916444463094	0.557379133122506	0.310231284573563	0.756385081681923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98597488410793	3.63768659069995
Merged-chr11-60305765-1	2.56718544640538	0	1.42127890145582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70383523-2	5.64644076813079	-0.350900946782003	0.939261828259583	-0.373592257477565	0.708707695157806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.14143228603163
Merged-chr5-107961569-3	7.85472522629997	-0.274108658648139	0.975383575399257	-0.281026526959855	0.778690053797971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.815004392037195
Merged-chr13-62620932-2	3.50274294482298	0	1.3932842707499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46231339-4	7.34083735512187	-2.47507429566644	1.24349595288475	-1.99041604431811	0.0465451239399448	0.562508799577248	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr10-88678257-3	8.60361493957732	0.788299950329887	0.802086494649795	0.982811648853497	0.325700147580621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47281662318271	2.99736760602459
Merged-chr4-148102267-3	4.87296064116445	0	1.36522560128166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95503849-2	4.61231552710891	0	1.36372852476367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77413292-2	3.01308218518003	0	1.40252580954883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128753608-3	6.71420791748452	-0.665673961502484	0.832741342830091	-0.799376621845357	0.424072061988902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	0.788686275880602
Merged-chr1-155210645-2	3.59919007566771	0	1.40618847283667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84156897-1	2.39174713875788	0	1.43830877625077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67856043-1	4.9732969502413	1.44112498460551	0.958517304516136	1.50349396700042	0.132711711512024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41715323525411	4.45696331599942
Merged-chr19-34228618-1	3.46572029923434	-1.13478164487332	0.799580517258078	-1.41922122960764	0.155834528506454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61023077888958	2.08990416182602
Merged-chr4-99296933-1	2.811907644392	-1.49707076063941	1.05448445685542	-1.41971818636742	0.155689741382692	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81622161625481	1.46460328489499
Merged-chr2-35231223-1	2.23111500638179	0	1.44942113964638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110841086-1	2.56130094332382	0	1.41978087258294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40744773-1	4.70546285438054	-0.897174038562941	0.922643262141461	-0.972395372487298	0.330853893189644	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94794910654401	1.36707655402198
Merged-chr12-34651197-1	3.17059018720455	-0.691689742967855	1.29880957521218	-0.532556701281521	0.594340481579186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	0.897114879832661
Merged-chr15-67187500-2	2.73252299452645	0	1.40883901647491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33243410-1	3.96365189856887	0	1.37698746564714	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70290504-1	2.97953301061096	-0.235054037574538	1.07915886072424	-0.217812266691476	0.827575386583239	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68820016584178	1.45451904642141
Merged-chr19-55928992-1	1.04563360070995	0	1.67215739858963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43884866-2	3.80263398074812	0	1.41076242250612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73427089-1	1.49739385428226	0	1.53850476231805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59118474-1	1.77125527057128	0	1.561050394894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76479975-1	2.586410610878	0.431248846191915	1.22097943017016	0.353199108466402	0.723939176209621	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	1.28728541095094
Merged-chr17-31072107-2	5.97761545303367	0.199153236592852	0.826340312788235	0.241006318475338	0.809550219413466	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90336541133098	1.61866135338657
Merged-chr9-35043199-1	3.74934141129634	1.09308315403533	1.29183118569853	0.846150151921182	0.397468986017866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.859510663435501
Merged-chr13-35395787-1	4.65794443525731	0	1.47210146434564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-152207898-1	2.50160439544855	0	1.4769293547028	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-139591454-1	2.66858366928658	0	1.41700535772066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-152322968-1	2.15654103167226	0	1.42020776451676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93605329-1	3.71781700643964	1.6254757221913	1.15882467292524	1.40269340148591	0.16070828583209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.27902262843667
Merged-chr10-103453423-1	3.16820240064025	0.75446276832563	1.92289074871245	0.392358624030415	0.694793253262771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94283950978213	2.95760266060984
Merged-chr6-54954462-2	2.45219612845381	0	1.45962524266549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-88895382-1	3.54481274765337	-0.958617086250238	0.887118007320012	-1.08059703257093	0.279876403106854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03473044346842	2.75367845361104
Merged-chr11-52346454-1	2.75797285681509	0	1.40427084105504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43630621-1	5.7410554195577	0.301035319771093	0.859556467040213	0.350221691435439	0.726172328962363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11913782298333	3.51218364737616
Merged-chr15-53730234-1	1.66132667968351	0	1.58420597430208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123548314-1	1.98156016971762	0	1.43496127694176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54933525-1	2.59973053450551	0	1.44349332002582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-33340797-1	2.34909687014101	0	1.43744732934258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45230359-1	2.08276582601967	0	1.55838247343211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27867823-1	1.34311932302906	0	1.68012146746323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49270124-1	2.23862270489132	0	1.48048520394339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116570071-1	2.19963779096244	0	1.47855239356983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123566441-1	1.67446154060206	0	1.42379939557366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6922456-1	1.89723450474201	0	1.47990299407889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-53168831-1	0.947020264918729	0	2.07909187384899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121354928-1	2.19729006856907	0	1.40193426327779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22325824-3	4.18812467346612	0	1.38668572606403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-134711768-1	5.12154955415997	0.221742478682006	0.934350879321253	0.237322491570926	0.812406614696884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	1.98728899046489
Merged-chr14-98870073-1	1.52617745039118	0	1.58989046038197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62865341-1	1.51186128298702	0	1.48148241081968	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40781987-1	2.22495257164886	0	1.45698604801765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35499157-2	4.66164376411765	0	1.37263806371392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97064243-2	2.9654230690606	0	1.39220422495911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76088707-1	2.3912396149598	0	1.55060872092593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70751371-5	13.2009020077835	-0.0217433714437604	0.500170865758817	-0.0434718871735425	0.965325374119163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53291164498462	3.36383955938717
Merged-chr11-111327097-2	3.27746262759876	0	1.40003439675196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169299779-2	2.60444277902163	0	1.47478612182648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59828247-2	9.64709225829962	0.205091021284776	0.613793363598769	0.334136915528533	0.738276244767483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44862538268337	2.62422746495551
Merged-chr19-45177130-2	8.48561145239195	0.471880282635365	0.654897194427841	0.720541004985719	0.471191962307566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92547448468369	3.8344733927973
Merged-chr7-120871541-2	3.950741023875	0	1.41135341372996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50160066-2	3.52876141731664	-3.44245656769153	1.18703829592063	-2.90003833871398	0.00373117020126467	0.100004090493001	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51945196365219	0.303163067301871
Merged-chr17-33897999-2	6.73089743431269	1.00903487260978	0.97300844524047	1.03702581159037	0.29972382798953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16430127775811	3.22713359074338
Merged-chr16-93691514-5	12.6225466378143	1.59027895092357	0.653700222032684	2.43273429826686	0.0149852928260328	0.266814783075767	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29482089062162	4.7557960297122
Merged-chr14-57378309-1	2.07854388759157	0	1.41060811368876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32333183-3	3.29300452152759	0	1.40003161670494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137719533-1	5.9559646032953	0.808016632243297	0.788244556206073	1.02508368231858	0.305323704241088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82413829516899	2.47248588654001
Merged-chr7-102313336-3	6.26294040452354	1.55378073411878	0.934458026069628	1.66276139834129	0.0963602064574532	0.889160492755169	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.22956650128486
Merged-chr11-78349873-2	4.00208369976264	0	1.38455514510286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119152723-2	6.83310716087106	1.11073164968806	0.846537353492151	1.31208817319879	0.189490385959026	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50078985575557	2.06501871042627
Merged-chr8-36267469-3	9.92960708823489	-0.149888103829726	0.562040906362733	-0.266685399822108	0.789711396176825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75592392544034	3.54735579547719
Merged-chr14-76699003-2	3.46214532543931	2.14894444312381	1.40424481488502	1.53032036888794	0.125937448866539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.765562747387088
Merged-chr8-14605679-2	5.70468096139821	-2.70096518099745	0.921992167250928	-2.92948820709705	0.00339520696067387	0.0935584369519526	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1018582262475	0.724326877898254
Merged-chr4-62667408-2	4.17171135305402	0	1.36204696959359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35212938-4	10.9381983706195	-0.970253786721069	0.644795987494559	-1.50474538542201	0.132389549792572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17431496269062	2.349303869554
Merged-chr3-109169337-3	3.6143409528315	0	1.37850422859398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99200542-1	4.12817199785078	-0.203995447363771	0.953586667626462	-0.213924391237063	0.830606019047803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26192334845542	2.2918226953127
Merged-chr9-94689816-1	6.84663869047068	-0.257660447683524	0.986333201777991	-0.261230634048472	0.793914655514262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07299891955197	3.17644868079552
Merged-chr17-88102771-2	3.0919701076365	0	1.37488326213624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89942223-1	2.69443570413144	0	1.44769840308818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40830189-2	1.85374135014585	0	1.52689023319342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43735654-1	3.79829289577287	-3.27866183871992	1.2176624292781	-2.69258684499587	0.00709000678671294	0.157888438721396	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47964850900044	0.376242425970964
Merged-chrX-96158068-1	1.81711219248554	0	1.46084639638198	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29372273-1	2.71903112816965	0	1.42512090349167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102272479-1	2.09876642152458	0	1.44306223323972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145026924-1	2.63126712159992	0	1.38324250082087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46868865-4	4.42434591479359	0	1.36872167121856	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46901581-2	5.98528135127303	-0.176196940171487	0.886350925381751	-0.198789142230093	0.842427689735855	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	0.897114879832661
Merged-chr10-91142924-1	2.6301571960036	0	1.4213469190477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43939495-2	3.93308425464249	0	1.40578679405494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134053428-3	5.04630137133292	0	1.36778102472637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106611317-5	8.40388795404285	0	1.35597560703762	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-31801375-3	3.88644181443531	0	1.37951763350784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136468585-4	9.58263979158126	-2.21596324556592	0.718347884739282	-3.08480513779224	0.00203685554156622	0.0632332555019977	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41669633008393	2.07776144459665
Merged-chr10-23979520-2	3.42674045952758	0	1.3858952527394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122562672-2	8.18273517910979	0.165125284872653	0.618931757245544	0.266790777722436	0.789630255290369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83098930992088	2.88881555709857
Merged-chr9-47772832-3	6.35647410129498	1.35080721913799	1.1132056779778	1.21343903095411	0.224962011286767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.25298535761957
Merged-chr11-106627926-3	3.56444176351492	0	1.38473074775579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25633132-1	2.87950289260798	0	1.39609058128596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50905479-1	2.87205272137328	0	1.3907000468377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16156139-3	2.93620109697692	0	1.40174646537076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45201639-1	4.84607462826567	3.56135001276033	1.11444758785298	3.19561911352097	0.00139531175306799	0.0467042805326497	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.08695703474815
Merged-chr2-170154350-3	3.43558530374495	0	1.38090380362822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69475520-3	4.63993638944268	0	1.3899519055014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97645054-3	3.47679556681055	0	1.44935360842072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55640680-3	3.32937122539899	-1.55669970661424	1.18821168381682	-1.31011984465071	0.190155296103979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29451429493117	0.465515277017237
Merged-chr18-67187344-2	5.37521893094684	-0.547680469779033	1.13717787489425	-0.481613722769593	0.630080375946775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	0.723581231604105
Merged-chr12-25146370-2	5.47854808748855	0.41528367226533	0.87818593251741	0.472888094523306	0.636293019221345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87757319456894	1.76415777129835
Merged-chr6-91677570-3	4.19304509662211	0	1.37425925561663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40548026-3	8.89948532229755	0.250153361759435	0.593617650527637	0.421404858054822	0.673459472333499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4044790941682	3.10969903909053
Merged-chr2-125777203-3	3.30267254286782	0	1.47436600030191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71988250-1	1.91871079877413	0	1.43147163289996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73444486-1	3.4626845322776	-0.228809874529247	0.979676889654457	-0.233556468408631	0.815329326238045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17813337661218	1.91189215097434
Merged-chr8-122983355-1	1.10865901263017	0	1.66283550099372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-22919164-1	1.61753432615792	-2.10266416579811	1.47438223249557	-1.42613232814065	0.1538301487207	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr17-28259328-1	2.17898997997838	0	1.53803144456236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105925035-2	1.92571531360971	0	1.4881151890663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59027922-1	2.7148517773249	0	1.38976499439279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67253432-1	4.21371612094928	1.39583345940962	1.06309905778545	1.31298532266344	0.189187893971473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21444166002597	2.66502565259121
Merged-chr18-69585408-1	2.25827308186742	0	1.43435162765283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11690940-1	1.41583667566455	0	2.43079714512506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88385884-1	1.16345143528055	0	1.7367222398691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47196605-2	6.69025633283088	-0.809840960181074	0.832294188352714	-0.973022485936037	0.330542126605764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98443010783851	3.0669411337352
Merged-chr5-82484768-1	4.19985377929483	0.0268446717491052	1.20261712175331	0.0223218772321884	0.982191197721296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66034808549024	2.74103791038916
Merged-chr15-25805466-1	3.51036625702875	0	1.3761142857426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53802243-1	1.87213665445807	0	1.58340982763214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101678217-1	5.81116326476686	-0.387477515000821	0.824755295411127	-0.469809065982014	0.638491436618589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74199059449359	2.43631673959719
Merged-chr1-184573560-1	1.93120890159134	0	1.48379968218586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66821954-2	2.6011120819908	0	1.48316740053013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150113074-1	3.49202194869385	0.660263282000875	0.889108298249298	0.742612889004601	0.457716082855316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38860239282551	2.27789912699525
Merged-chr13-41263496-3	3.87468519335094	0	1.38116402354339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90451071-1	4.49609360042687	-1.45537369867306	1.03385509309904	-1.40771536396894	0.159215370535778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63412505265868	0.903978167044898
Merged-chr10-7825452-1	5.78490277234385	0.150856181072811	0.734971084794517	0.20525457966144	0.837373228673899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16596752412581	2.44365332436013
Merged-chr10-83857980-2	2.4770183323067	0	1.56312746837559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82774544-1	1.93637225767516	0	1.48918001501465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64470891-1	1.55535742785124	-0.958098921108117	1.60746936395435	-0.59602935060063	0.551155619360446	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr3-146682564-1	1.9898344019647	0	1.44343915841027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108764640-1	2.29026545527689	0	1.39457932802645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180116210-1	4.18067807150634	0	1.38929651192726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85056399-1	1.98896839444982	0	1.46193465699964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88483918-1	3.2071602252337	0	1.38980030720876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-147272919-1	3.62623984905432	-0.213016988608964	1.03591024095825	-0.205632669884523	0.837077855972733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81951441047668	2.64076719591357
Merged-chr6-54056754-2	3.36725709339921	0	1.37871970672286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95598837-1	2.75768565178988	0	1.44391721496567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29474206-2	3.31723327936769	0	1.37965525232993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191151280-1	3.88173379672773	0	1.38126294381332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137042656-1	3.0092730119404	-0.949916080407591	1.34640683424769	-0.705519354362429	0.48048709170404	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	1.14143228603163
Merged-chr9-42138640-2	10.4003491045526	1.13899663627786	0.682590422720746	1.66863846659014	0.0951890506753595	0.882097102908603	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44857545836358	3.95334452918584
Merged-chr17-48274303-1	2.00957817535388	0	1.41572639800624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48510304-2	5.34951169329522	-0.691510976558672	1.40949143945342	-0.49061027062841	0.623702120827288	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr4-139586611-1	5.36566931662418	2.18454131973863	1.07448945013006	2.03309703922565	0.04204272007748	0.52510159594843	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.18023039862294
Merged-chr19-10580925-1	2.59242179392504	0	1.44889761472281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145113002-1	5.0406217608845	0.890682206826353	0.704275588092545	1.26467851773575	0.205986593794305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30945684676081	2.87195271590101
Merged-chr11-119253480-1	5.64330238394898	1.11099806572422	1.0071830978374	1.10307457314339	0.26999478183319	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.71968126597395
Merged-chr8-81765512-1	1.65261857098438	0	1.99531123586218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104422413-3	3.71059537132494	0	1.38175222291493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46423064-1	2.75338326115351	1.53352311285479	1.27902218295669	1.19898085685252	0.230535389278334	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02674429890598
Merged-chr13-80898663-1	1.5238435411832	0	1.52784869954143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54382408-1	2.92769489048083	0	1.43071803639075	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17368197-1	1.83621415025123	0	1.43823167769391	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77848533-1	1.48162601875801	0	1.49387964292783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29819415-1	5.25033438139634	0.0165634043917007	0.858290345729088	0.01929813666683	0.984603270377282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12570519757736	2.64344109485219
Merged-chr10-75551311-1	1.50225037847341	0	1.48962765740906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22050301-1	3.55848985195697	-2.31223838484504	1.18503320816412	-1.95120134095416	0.0510330995408076	0.597481856114314	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	0.303163067301871
Merged-chr15-7858159-1	1.61986049017452	0	1.90333853567105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46446671-2	3.42224704478624	0	1.40448153322471	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105748395-1	7.80348013405468	-0.863606561333343	0.616709375343863	-1.40034608822319	0.161409705747949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.036690813534	2.13100010773246
Merged-chr4-156077059-1	2.02397074499211	0	1.54047065936154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48582208-3	7.76937628850525	0.580922079804297	0.77887405696847	0.745848542016356	0.455758912879927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47126464988938	2.14563077749166
Merged-chr4-41388705-2	3.30616655513445	0	1.39862501929777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181305129-3	3.73873576954508	0	1.40795434622135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180736761-4	4.4600118090188	0	1.37490629450984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179561270-2	2.93604639618177	0	1.43730322910709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-13787093-3	5.07830704279818	0.582537756396807	1.35232253982285	0.430768355360784	0.666636810978456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.679405493272835
Merged-chr5-64202480-3	4.34387564975601	0	1.35982014916709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144825358-4	3.76611669032347	0	1.39159418772014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117093192-3	5.33520924467675	0	1.35996797670832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100892313-1	3.30733043796788	0	1.40562713587553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156681989-3	8.54177537587689	-0.202017287294302	0.519423870328779	-0.388925690239133	0.69733111733827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45982731625878	3.33593944005993
Merged-chr7-142345893-3	11.7400408033058	1.63036247234687	0.630529862611706	2.58570223080915	0.00971808451318994	0.197113938825557	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65841191292647	4.28577604993524
Merged-chr14-13901786-4	8.80451430852582	-0.151209637153669	0.629988805073859	-0.240019562150697	0.810315091410733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58321587565435	2.50022049925494
Merged-chr8-42226361-2	7.13869661314699	-1.49772692685889	0.726412760458316	-2.06181252365932	0.0392255882787017	0.501099718599771	C57BL6J_F1_Control-BALBCJ_F1_Control	4.58367290605364	3.18887349416461
Merged-chr18-61466196-1	3.83152807105094	-0.972281892572334	1.08794967872721	-0.893682779252994	0.371491641761897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.723581231604105
Merged-chr18-56439940-2	3.78241989154051	0	1.40334886178942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154881782-2	7.02718118159654	1.68172236696044	0.778741550086125	2.1595385102727	0.0308084130114499	0.430269569642489	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75520908275751	4.06767594944592
Merged-chr6-134121560-1	4.68869949065964	-0.49222401472804	0.897436626806238	-0.548477742077173	0.583363908377254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08401249662001	1.5254723561935
Merged-chr5-107926709-2	6.32617389900533	0.75858543632462	0.637818555980477	1.18934362948801	0.23430447332666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27612071477265	3.8896559587079
Merged-chr5-107967048-6	9.58752660571843	-0.101510586447762	0.662157774440209	-0.153302717820657	0.878159557500014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86122364749948	2.68092963192892
Merged-chr8-125061096-2	6.11164784225393	3.21807308239593	0.842302680155049	3.82056611977484	0.000133145703633073	0.00746151268431984	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	4.27195399555872
Merged-chr18-65687260-3	7.27030124335811	-1.35000475929505	0.846314061790741	-1.59515813365848	0.110676878280967	0.968307815001739	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31193049927473	1.27673210875742
Merged-chr2-122462179-1	3.10084775565841	2.75660442466318	1.24861268637883	2.2077337950632	0.0272628355453008	0.398035358418752	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.40024388691264
Merged-chr6-3394366-1	5.44286650141217	-0.907055303476148	0.945182261916243	-0.959661792252853	0.33722545869763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	1.18909650862134
Merged-chr6-135156722-3	9.6368188027135	0.504423584709296	0.755803921506985	0.667400062841079	0.504516625774476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45574789017098	3.86188729096237
Merged-chr1-165660939-1	3.06989431013938	0	1.40871101502498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105286096-1	1.97343783647589	1.86221907186169	1.53829601047249	1.21057264608631	0.226059233076656	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.01477727114168
Merged-chr6-91669481-1	2.50343728629883	0	1.45056197445052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114857940-3	5.91779013688174	-0.954881698702836	0.974299121383574	-0.980070368273387	0.327051384737655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08153858449613	1.18984215491549
Merged-chr10-66909380-2	3.39077616334105	0	1.39031299131073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10973857-5	11.3866688842597	-0.201514853759449	0.521057384514433	-0.386742151149509	0.698947107544561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82459919457377	3.43930364003341
Merged-chr14-73059879-2	2.77679603404914	0	1.40229183815146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-65108832-2	5.87864081970147	-0.268370946779892	0.8723831076847	-0.30762969206516	0.758364124157828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30492589888769	2.13118170172995
Merged-chr8-14546881-1	3.37230000391337	-0.148384205755629	1.41735669280173	-0.104690799788946	0.916621162548383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	0.465515277017237
Merged-chr1-23792955-3	3.70704527726022	0	1.39750744066399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102577668-3	9.17699881760854	1.56443296397555	0.686881206902816	2.27758882941297	0.0227510866662539	0.352042789664359	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	3.71481500220595
Merged-chr10-67100376-2	3.24896790176823	0	1.42761327577618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66042950-1	5.06625281258417	-0.147142294614682	0.967775613230295	-0.152041746664335	0.879154009308858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	1.25298535761957
Merged-chr10-120840153-1	1.28821518598255	0	1.56672480545405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73489458-2	3.53569528891113	0	1.40402065862754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31996438-2	2.5210655568164	0	1.42110473341256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13213468-2	5.77752490939022	0	1.39763432578537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115635500-1	2.1037385081282	0	1.46781125878222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53735330-1	2.87278385568599	0	1.48566575103817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116963478-1	4.34975575993458	-0.494691704399761	0.901331551093525	-0.548845431849783	0.583111528993032	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62367387427232	2.09243520768647
Merged-chr4-134160241-1	2.33763072774098	0	1.55605351858059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186123894-2	2.84661020610754	0	1.40540925398957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-32401333-4	4.65354441477391	0	1.36048793878891	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50421553-3	6.59603083520567	0	1.41642195889804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100398036-3	3.39885765063991	0	1.43643334183176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86873657-1	5.58791631975483	1.63535736102139	0.88998871753057	1.8375034748294	0.0661356039706591	0.708055947520591	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27256041875316	2.79231662755502
Merged-chr3-101779100-3	2.85468457544986	0	1.42025434970566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48962109-1	3.15842084753785	0	1.41888543896554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88467292-3	4.83734155277485	0	1.36760702021122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118049519-2	7.88935103907919	1.61673828261166	0.709675351421907	2.27813785468575	0.0227183654896101	0.351737715144641	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25821626200969	4.37722452972739
Merged-chr19-22915977-2	4.01620896386152	0	1.38375457663567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34165272-2	5.92094231311165	-1.01344092057838	0.649311325082712	-1.56079353836818	0.11857247253742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51187542435926	2.20184266808343
Merged-chr11-82078216-3	4.70243203037744	0	1.37251503626402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74386089-3	8.27890972621484	2.51997186257422	0.727606418350352	3.46337222847424	0.000533449879346827	0.0225138214219054	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	4.22667489902663
Merged-chr1-176819475-2	3.53698717475302	1.23101782423542	1.35268613139509	0.910054295423141	0.362793876383338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr10-54058546-2	2.6641341475118	0	1.45019571508149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8306689-2	3.5287735762271	0	1.37052274455464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94525992-3	3.8940572874991	0	1.41701691257165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35984074-3	3.60846813519342	0	1.40375342605176	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46976198-5	12.3567803899663	0.579350508718057	0.585576961549647	0.989366977800642	0.32248362500819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40315496738222	4.08346736851285
Merged-chr8-70543769-1	3.67971384160814	-0.172336897391546	0.886611160253271	-0.19437709011278	0.845880627245296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	1.56533893459231
Merged-chr9-47621903-1	2.54760679214244	0	1.40943842006808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-42520909-1	2.5720520164473	0	1.44516103171346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32832358-1	3.44608420749039	-0.0390000034790097	0.986069929627198	-0.0395509510098887	0.968451132237012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.40024388691264
Merged-chr18-77708018-2	1.91477230577553	0	1.59151801321389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38484515-1	2.04407937273611	0	1.44219933121643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116246132-1	2.82341721660831	0	1.46976683883376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59310347-1	2.12985285736913	0	1.43416733316438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34693527-1	5.48938224781323	-0.676684900580912	1.3437910635269	-0.503564072531404	0.614567744784264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	0.303163067301871
Merged-chr15-91169182-2	4.17249086980292	0	1.3748501180617	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-10480921-1	3.91904835624369	-0.144840744049067	1.0195279150893	-0.142066481854378	0.887027493200403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30810693946836	1.82190623236164
Merged-chr7-122980880-1	1.71416628411465	0	1.58012314465565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70544912-1	5.2847400118975	0.297296915616637	0.679470756489341	0.437541885029309	0.661718407006571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45990924072161	2.3843775015461
Merged-chr19-14668059-1	1.89839024987885	0	1.45493993000042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171171847-1	3.64601778378234	-0.618827780687032	1.41399162831442	-0.437646000368983	0.661642919758853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.413263464506793
Merged-chr9-50499077-4	3.82387280428338	0	1.38660021601459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23054875-2	9.3988246682483	-0.491631668057773	0.601788338528009	-0.816951138103336	0.413956351919937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95494884104543	2.80878300914609
Merged-chr12-99975282-1	2.01472725240778	0	1.46940182830667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25151067-1	3.11063312396854	0	1.38100510462951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77453837-1	2.60791425761547	0	1.55950942346452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31214617-1	2.07301012429887	0	1.51107379998296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3692654-1	1.96480795532967	0	1.48672573099433	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14053785-1	2.37099321431647	0	1.49550085986423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95645073-2	7.51294821039602	0.314897981485539	0.705022592374548	0.446649490231154	0.655128156445991	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24040030834546	3.14707088549522
Merged-chr5-8356568-1	1.7401655631315	0	1.56933237867172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3872755-1	4.71853541129925	0	1.36783880977291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80323382-1	0.996598492228366	0	1.7248039361159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120032310-1	2.0035735177447	0	1.54152467837802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136459169-2	4.309356480391	0	1.39777388909455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167257364-3	3.87778240160643	0	1.37169952219791	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97412696-2	2.7797217661547	0	1.39077615615437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95345195-1	3.68610351132111	-0.958861408398617	0.910342852654458	-1.05329701397961	0.292204887035306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44650928871844	2.34502298933502
Merged-chr5-17882081-2	2.36422273952558	0	1.44047683852565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72290112-1	2.618002600181	0	1.44740098061928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35993143-1	2.19413300768532	0	1.43363261836707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90039086-1	4.09396897612435	0	1.39274387683253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179832959-2	4.10875957096681	0	1.37678345033098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59491829-1	2.76096033167167	0.602864309194266	0.925928263035511	0.651091810523063	0.514987222700221	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	2.01161228884919
Merged-chr12-12222747-2	5.90699440415506	0.947595837200031	0.760441862813983	1.24611214024106	0.212723228427899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82951538062168	2.50773376845066
Merged-chr16-36770354-1	2.04659259366535	0	2.40893422514803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31459623-1	2.56267145087966	0	1.43411868593631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32363996-1	1.95110299658399	0	1.50408427933671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150248236-4	4.10130109131555	0.622219495078863	1.39001048692494	0.447636547300712	0.654415522396377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr1-156491386-1	1.63959747584249	0	1.50204994996918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15467850-1	3.03935274466228	0	1.38053379636474	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172366634-1	3.83883979321709	-0.0832209390452128	1.06309302914441	-0.0782818970341567	0.937603817341821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	1.92460482503279
Merged-chr7-35093828-1	1.53638575224709	0	1.560084312672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68127792-1	2.3235741930857	-1.88485066955775	1.27032991813158	-1.48374894006276	0.137875537513314	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98700836604974	1.02748994520012
Merged-chr17-84035104-1	1.80646140795494	0	1.55543912039268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53063082-1	1.1273258470588	0	1.66740036966511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-9714806-4	4.45245517378543	0	1.39510653577966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69559985-2	2.91376104082176	-3.35953586311314	1.21059594156915	-2.77510914067545	0.00551831856725289	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29802325937094	0
Merged-chr7-101564301-2	3.97859705377022	-0.0974920099051549	1.25022409778162	-0.0779796278748291	0.937844258239596	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.879366456215217
Merged-chr12-112633791-2	4.0199304707875	0	1.42413647790204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109747786-2	2.93956032423592	0	1.4205658653121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78278486-1	5.50358154905421	0.576648649325604	0.869096213273397	0.663503810646801	0.507007939744613	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.993458951033742	2.86523152519899
Merged-chr12-40471608-2	2.86494307633771	0	1.39292123939958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26960188-4	5.66359488980278	0	1.36615112032334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79248288-5	11.4598698300086	-0.0507727325620651	0.473477316571191	-0.107233716980887	0.914603567355534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20001260783489	4.2781510733697
Merged-chr4-59360905-3	4.35476273597263	0.48681098894593	1.22534661617606	0.397284313286898	0.691157813756144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.724326877898254
Merged-chr9-98334422-1	6.1948289907541	-0.464647400173001	0.915227125136621	-0.507685346523838	0.611674026484219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76417489900294	3.05082886371412
Merged-chr19-47394959-5	8.95025483193615	-0.490220259404447	0.736896843107727	-0.665249504037815	0.505890922184784	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0968009030329	1.75648227519025
Merged-chr8-105218152-1	2.80498153291217	0	1.41070655465328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148221662-2	3.07816865903442	0	1.38752190347539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-52374515-1	2.61383615678373	0	1.42375183156199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141742089-3	5.91073960110561	-0.49831840095409	0.858517336413211	-0.580440696790129	0.561617467546906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89999310574352	1.55809314683451
Merged-chr7-98963083-4	4.15693404757675	0	1.42905920665442	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157443808-1	2.84824848384798	0	1.43393975882297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120947883-2	2.7043413263694	0	1.44804951036647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36015881-2	1.77454408963496	0	1.6910320207962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-101481345-2	1.9755814192039	0	1.44292511217995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108931919-2	3.00579096939614	0	1.46456197027573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134279736-1	5.21586546129505	1.6734996136637	0.949135080112069	1.7631838172772	0.077869492233755	0.78124906587396	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.43753821700353
Merged-chr11-97771609-3	4.20045744604361	0	1.37304959430358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103013840-2	3.24592694048953	0	1.50498334881596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79565573-1	5.67404743861654	0.532349408439871	1.01159968225906	0.526245132116939	0.59871789983842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2758756212311	3.25692710809513
Merged-chr4-56070220-3	4.06401409315305	0	1.3880623698271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31091330-2	3.69189473616827	0	1.402682412675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36242273-2	3.49135876094859	0	1.378949342365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62006537-4	4.26936984763082	0	1.35686357903384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4369314-4	3.5754239212288	0	1.39211760785071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133202422-2	8.98929372561203	0.669831422546625	0.531335020184828	1.26065739524118	0.207432310161783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47133639125901	4.89539772875184
Merged-chr4-124646758-3	3.37312159944915	0	1.41148028823753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134491922-1	2.86270794839651	0	1.38152642535073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118539963-3	8.06195820095716	0.549512902821858	0.656209851307414	0.837404226295938	0.402365390955448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43404351967021	4.17908254067629
Merged-chr15-90275970-3	5.70602123328248	1.80263106145058	1.20254845672218	1.49900908472666	0.133871275280167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.11893902259477
Merged-chr7-16880892-1	2.81802397657928	0	1.41063445992572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150603723-3	10.2779881636112	0.309223505332688	0.616693326050506	0.501421844976093	0.616074268947801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3020211711022	3.1268779879372
Merged-chr16-91365951-2	3.50129737551398	0	1.3933727064658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124049043-7	11.944459920902	-0.264678603069083	0.49486270400111	-0.534852598365322	0.592751788338704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15953922972142	4.03486271499072
Merged-chr8-120499131-2	2.55615179851346	0	1.43393968476535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89256158-2	3.38577531495039	0	1.38375518575592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91290707-1	3.00825416824136	0	1.43800729320152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-40204300-1	1.88943292768145	-0.0980667459417372	2.26798152326833	-0.0432396582316137	0.965510491939183	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	1.16492870185157
Merged-chr1-144294158-1	2.69427558301629	0	1.45022337768942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64702419-1	2.51802871674904	-0.040125300065861	1.31910250923581	-0.0304186367510639	0.975733181754731	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr4-59467307-1	2.36029446033971	0	1.41108727796193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-10636975-1	1.07840076119064	0	1.73515159370674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17795335-1	2.28309740565537	0	1.45617361042671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-89149316-2	2.98630460961632	0	1.44284449506294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80873052-1	1.95313114736106	0	1.46518061433088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100449969-1	4.10390026995972	0.551216851281122	0.946741750959848	0.582225142941329	0.560415039764116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	2.42722608562101
Merged-chr4-133445943-1	5.26382987418086	-0.668565504939871	0.777502135636843	-0.859888962738678	0.389850253216681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28614646367484	2.14874982292893
Merged-chr10-12548619-2	2.71480895468867	0	1.4230214500132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61656588-1	1.13827946463089	0	1.63475467823831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67955782-1	4.66690589758392	-0.404575683601754	0.894997411205133	-0.45204117747892	0.651239318303286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37882470607712	2.18314157546539
Merged-chr14-78678136-2	2.60505268847092	0	1.49284543976658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43338068-1	2.09594843339508	0	1.65638234301895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151684271-1	1.6681083747566	0	1.46847039049413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83131446-1	2.24309469055368	0	1.4341225498634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8519136-1	2.72920883668371	0.572789828578496	1.17016642648276	0.489494327999278	0.624491769172667	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.18909650862134
Merged-chr11-4336459-1	1.52757104387311	0	2.42728024603454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25836987-1	1.20599201924595	0	2.2247284813282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78807582-1	2.82501094731418	0	1.41428264415181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101779591-1	2.59022470647903	0	1.41322115940435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-92841209-1	2.70556484779043	-1.50228745770139	1.3424114606843	-1.11909612045148	0.263099134753537	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	0.577068348605183
Merged-chr5-99246136-1	2.13376384954154	0	1.46167409525484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77905438-2	3.14481520652928	0	1.39891273429596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26981309-1	1.81231604784086	0	1.46316732413558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143135102-1	2.3463149342568	0	1.58562215844423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154934142-1	1.64310678963657	0	1.45522228147007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83665275-2	2.79624986177528	0	1.39805358629486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40524580-1	1.73011539050107	0	1.44699360973971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129533405-1	2.81342491644619	0.105521117758113	1.08207970259947	0.0975169550862295	0.922315870189757	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	1.65345633230702
Merged-chr3-69453712-1	1.62355634292982	0	1.84811333298655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-114467655-1	3.39374300305582	-2.44779107726007	1.26302627758043	-1.93803654026049	0.0526187646953449	0.611306567658528	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90746750172548	1.40024388691264
Merged-chr10-40489552-1	2.81488228125676	0	1.40762949383468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15060872-2	2.59901592826969	0	1.46228738957647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161477252-1	1.42673826170893	-1.62772160308519	1.54382645467766	-1.05434234408494	0.291726208766442	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr2-70945091-1	2.37797141868661	0	1.46909930158162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52577329-1	2.68063884364596	0	1.4345844651206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31087108-1	2.50168660462995	0	1.44680264003704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125541096-1	3.58740407816227	-1.12615243522571	1.11280815398418	-1.01199153797872	0.311542099425595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47184148756515	1.68020903733389
Merged-chr5-90652933-1	2.53553200493693	0	1.41370779623673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99245596-5	12.7104693918099	1.51809913661843	0.793097648489707	1.91413899601057	0.055602397986609	0.635110475342315	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47971361857133	2.9057079005854
Merged-chr16-58481967-2	3.95208639015341	0	1.36592918271011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86250487-2	3.21675223725788	0	1.37569998765003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36967300-2	4.5109462434893	0	1.3930954677363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30789705-2	3.3685448180651	0	1.37592806893484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59352636-3	6.44640482151631	0.21940974322229	0.925505806355735	0.237070088286357	0.812602417050162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89082683942207	2.1881845164991
Merged-chr14-45687363-3	5.48997582220954	-2.94603272752912	1.16428933233922	-2.53032699493186	0.011395626816223	0.219764667053258	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73775798795819	0
Merged-chr14-25858186-3	3.55553923625041	0	1.42412676555454	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44537871-5	12.9011538928575	0.0282903183603247	0.488999208547775	0.057853505416381	0.953865318353545	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36793544212227	3.39279925280115
Merged-chr5-101969315-3	7.65394293340666	0.1626667326117	0.664440672833174	0.24481754242721	0.806597710288649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22722780130609	4.39327523016277
Merged-chr5-23416005-2	6.73182360233892	0.325100947661592	0.756747601585409	0.429602878133338	0.667484543097233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74427237692098	2.10206186112574
Merged-chr4-139293818-4	10.0456003064712	0.264727356124495	0.618048974846622	0.428327473870806	0.668412719224349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11365905378018	4.38343091626744
Merged-chr6-71476944-3	5.05592271765951	0	1.3617656700172	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19936201-3	5.15329107093756	0	1.39249997953571	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120934843-3	3.52643571834518	0	1.39406378692282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103065159-3	4.24340551007102	0	1.38841133576345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43678716-3	4.19463946786472	0	1.37247607416407	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24024863-1	5.72988710113531	0.094185171448791	0.965491132002705	0.0975515655471885	0.922288386075962	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18911587802649	2.32937334132141
Merged-chr6-30326266-2	3.05793459842894	0	1.43661937388118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126848250-2	5.49679765877677	-2.21021125322637	1.13944296299672	-1.93972960911843	0.052412559195892	0.609171328913726	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61177918077585	0.55634759613363
Merged-chr6-136989984-3	6.86892512847037	-0.647866508669621	0.845736162721487	-0.766038555788909	0.443653361266878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16680051662379	2.15620955717331
Merged-chr7-99818542-2	8.00241416720207	0.535594258101711	0.686489497789593	0.780192937876333	0.435277318542159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81733431498626	2.79403895970775
Merged-chr15-101983748-1	2.16826788025892	0	1.44771115572984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78996799-2	2.67965150474221	0	1.5008649956583	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79182072-1	2.26186138263936	0	1.44339717641383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-3009973-1	2.0224225127466	0	1.45155429826216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-59020521-2	3.51746797075686	0	1.38598247976961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57546019-4	4.44494224517228	0	1.40281581398489	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59515067-1	2.90440820203052	0	1.4150300678374	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124873320-1	1.93306725751747	0	1.45223832427545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57905985-2	3.15134753657098	0	1.39939415152218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126629767-2	6.81385896489727	-0.0674601417103083	0.694717673886649	-0.0971043982988048	0.92264348803371	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91884181450402	3.79809091226847
Merged-chr12-38860327-1	1.68840461113925	0	1.49618442208011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4345500-1	2.50809208490887	0	1.46633814775416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78612267-2	6.49886833539886	-0.642401827030439	0.78386367598616	-0.819532588013151	0.412482617053616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5459572792821	1.97135661134131
Merged-chr19-43993574-2	7.65107660785461	-0.218646214266902	0.748462882356929	-0.292126997104225	0.77018952581397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61681377988095	2.55491375810168
Merged-chr14-21279201-1	1.84941123783932	0.61203102499108	1.49105638407242	0.410468062461517	0.681462627045281	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr1-52703292-4	9.33115249579392	-2.43504927467364	0.711672381849569	-3.42158742811569	0.000622567053156906	0.0252364820600718	C57BL6J_F1_Control-BALBCJ_F1_Control	4.22601980067284	1.86501351763573
Merged-chr17-24015818-6	20.0281758001557	1.15366104159251	0.464314219637062	2.48465584899443	0.0129676731946885	0.241821525622666	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97511283129314	5.25594214065602
Merged-chr6-5102507-3	4.5555128271346	0	1.46432207992219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69938486-3	6.16533495494307	0.784087025730607	0.690239014994564	1.13596451185359	0.255971416971257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96027510505613	2.93415672330046
Merged-chr6-135995440-2	2.66367523667413	0	1.57446757348043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5522215-1	3.11723734309661	0	1.41207766937249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47438160-3	3.72207411974198	0	1.37678394227934	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27761013-1	3.4099534201367	0	1.42572050208848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95746655-1	4.52834716204047	-1.89655631515885	0.926491095880202	-2.0470313461103	0.0406550069052662	0.513348552929934	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23921600458732	0.990919527803163
Merged-chr18-10776507-1	2.73331319720335	0	1.39677300541472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60857772-2	6.18991929674122	0.981794913989893	0.831242615126614	1.18111715656006	0.237556185260216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61691174577224	3.04522609322883
Merged-chr2-164009178-2	4.80604319139682	1.1076984321486	1.13921257963486	0.972336903533527	0.330882970454802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.13341594473881
Merged-chr19-21943623-3	7.16488596247829	0.14810911779267	0.589049469515425	0.25143748608162	0.801475888670237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55771059403982	2.67609144576738
Merged-chr15-97789207-3	4.2675303163108	0	1.3874153088758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84356809-4	3.93607430922	0	1.42021049228542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117385900-4	4.25476794247117	0	1.37038643058734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43269184-4	4.05569451825432	0	1.3912999582987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16211124-2	5.55038474661675	2.3797166888215	1.10104486978515	2.16132580435697	0.0306701809810901	0.429358837999247	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.22914634982628
Merged-chr11-100816319-2	3.57595508250186	0	1.39011348099149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51424879-2	3.19710230753045	0	1.392722316918	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164336082-4	4.52936128217093	0	1.36189818362776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-118107788-1	6.69316252119478	-0.169389375531478	0.728536576539353	-0.232506343519635	0.816144760790058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22299259577626	2.2259409611797
Merged-chr5-67739442-3	7.72052207522643	-0.324968251731587	0.88582638926504	-0.366853206982476	0.713728516918264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	0.838451940269823
Merged-chr7-125579635-2	7.41672488635573	-0.953538200858541	0.738853926166983	-1.29056389509263	0.196854942392395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24742463732395	2.91261583927918
Merged-chr9-22151140-3	3.70662366767128	0	1.37115172831162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33997075-3	16.1708801433328	0.3621300548012	0.408484739188669	0.886520401032512	0.375337165715495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.02778832913393	5.35692583261884
Merged-chr16-18108404-4	4.72769759967414	0	1.36328181277473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105970965-1	3.49468085533998	0.0106639474809851	1.14565656967805	0.0093081537375392	0.992573275087437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27510078813581	1.96625026123187
Merged-chr3-105039073-1	2.45211325082353	0	1.42071794798004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76857402-1	1.70061195789026	0	1.50528157110801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83881188-1	4.48186000109627	-0.673222659328754	1.04942533415501	-0.641515539426948	0.521187788091665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21312207999876	1.00033585660626
Merged-chr5-76244594-1	2.00538076380131	0	1.47248999318819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181483966-1	6.95780894939534	0.164928149893427	0.701409358717561	0.235138222556622	0.814101452922566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75703864874546	3.24593839662396
Merged-chr17-79569836-2	3.26510986621633	0	1.41478088623353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167842550-2	3.61330256704414	0	1.40671475278967	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84783019-1	2.99480333160849	-2.59773253292124	1.02765936596413	-2.52781477886314	0.0114774884827743	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70317705787455	0.878778741524029
Merged-chr8-39625432-1	5.10199188005844	1.7160198044086	0.959140796442772	1.78912190032258	0.0735951858733846	0.755821029452355	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.53324106310013
Merged-chr16-10987647-1	2.28202115526436	0	1.40183209901061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6415594-1	2.160572589335	0	1.42361972062252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26547953-1	2.73800669580483	0	1.42656666365428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13593326-1	4.63094434943768	-0.214667463988484	0.975062463185787	-0.220157653579555	0.825748375040379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.27992882773773
Merged-chr1-151575354-2	2.82425721175917	0	1.39897108423698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39257768-1	2.08494352103055	0	1.4395946440746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33993476-2	6.81485063982149	0.195308513124237	0.60902703345959	0.320689398654085	0.748445781966787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76766942137763	3.67199541578761
Merged-chr8-105609360-1	2.15562805503013	0	1.47744717589248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91968178-1	1.97958133456516	0	1.50186629607618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13417321-1	3.82258970028012	0	1.43951250762607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121592272-1	2.85424000809181	-0.658141345647748	1.18842639749374	-0.553792264321707	0.579721023007211	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	0.859510663435501
Merged-chr4-119104983-1	2.65859482259543	0	1.50858744355965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100714706-1	1.91412475666838	0	1.44992543164385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44164381-1	2.93641297880414	0	1.39500047336139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22872509-2	3.65153961113395	0	1.38259908547382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79030767-2	3.68551719130586	0	1.40011112899474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69060884-2	2.72111651548783	0	1.43172243249448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150375529-1	0.791358258818338	0	2.44077821194861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44058896-2	3.5227121943203	0	1.38507887395013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89488035-1	1.71440925731721	0	1.4582751698914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32947313-1	2.40930331321881	0	1.43838018235777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73041714-1	1.54397644052427	0	1.50617165515652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115899847-2	2.03956437384087	0	1.46389641851315	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99336056-1	3.25426409911869	0	1.40389364523074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49198012-1	1.77581309539337	0	1.61828087383796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76894281-1	2.74135790917728	0	1.40059445804124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145157053-1	1.91302231708056	0	1.43877977395801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33697094-1	4.17304411637339	1.96608113002087	0.985966892987668	1.99406404414175	0.0461450559931781	0.559345179297054	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38195934385413	3.11669881926333
Merged-chr9-77689385-1	2.86697038866879	-0.0708474787540949	1.18295630375368	-0.0598901908120244	0.952243092470191	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.67591700901439
Merged-chr8-110075633-1	1.61182120436967	0	1.4526040621104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93485492-1	7.35900301714374	-0.600806580445136	0.673302215486	-0.892328239275828	0.3722170222929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18868224432605	3.48936287282207
Merged-chr12-35292528-1	3.17978018616793	3.56208798398175	1.22175283906302	2.91555531535622	0.00355056160893042	0.0965990883382625	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.43534434522092
Merged-chr10-108190218-3	3.64977041753043	0	1.41130200904903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124146138-1	2.18748731124266	0	1.68169672200002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59822315-1	2.447649114358	2.61973753994514	1.31348880557489	1.99448790794874	0.0460987601336982	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.25298535761957
Merged-chr6-115712393-1	1.73601261528252	0	1.47028954070753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-30779771-1	1.42931295664875	0	1.49082055744153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116211035-2	3.07471485028929	0	1.38827320964063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81065443-3	7.18790054986485	-0.0364101992270878	1.25593816910171	-0.0289904392770623	0.976872215742609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.724326877898254
Merged-chr2-49734124-2	3.43844523905269	0	1.41179080236885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37097571-3	3.45336037730038	0	1.4006588578782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161053263-2	7.5054614812802	-0.402458716051725	0.920226302828013	-0.437347546809845	0.661859318184307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42467233926184	3.07808150963609
Merged-chr15-81057899-2	2.26729696791194	0	1.44300006072858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135460979-2	4.07094093821892	0	1.46502268664879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4450203-2	2.61689741063119	0	1.43148691275333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74341221-4	8.04752457221617	-0.918547795269828	0.809637221556846	-1.13451774549539	0.256577434378012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44230805569002	1.86575916392988
Merged-chr6-117802244-2	3.10397047609809	0	1.51043979687896	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16256188-1	6.27678131276656	0.480478278500141	0.658126244860849	0.730070077362939	0.465347350571584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54204578080207	2.86423235599279
Merged-chr17-87247858-3	15.23427539078	-0.0458545992147173	0.483775891091824	-0.0947847961402726	0.92448576341876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.66921776648676	4.99534624518594
Merged-chr9-22814981-1	5.54118557989182	0	1.3943656310421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59244562-2	3.17039455185319	0	1.39653285985097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9541430-2	3.67736447480924	0	1.44265384210393	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115710022-5	11.0911948000097	-0.0562930690234464	0.502897537525933	-0.111937452110796	0.910873000709406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02074820190239	3.36755776274617
Merged-chr8-123202432-4	11.5563400660238	-0.494098358293651	0.508124954762886	-0.972395379644796	0.330853889630241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84968850430915	3.3913858350374
Merged-chr2-126712743-2	3.32375480920759	0	1.40852637299748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84714016-1	1.58670212839514	0	1.57714101208747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-7073465-2	2.68363106396761	0	1.46907958534721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117094303-2	3.51185978938114	0	1.40000338024506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55673414-1	2.13014282454117	0	1.42130159227615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57759533-2	2.81157894809648	0	1.39938331683224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128302375-3	3.63187985076314	0	1.39000572822539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109907785-1	1.9567048658336	0	1.52236122035962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107605537-2	7.75319729481056	0.21627141236216	0.533045533543515	0.405727838904226	0.684942584948533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49120428477706	3.67475492960413
Merged-chr6-59219953-1	2.40915146214032	0	1.43659980451805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-117786069-1	2.19047548745813	0	1.42894971178723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24984388-2	6.36450058263735	0.161590288573209	0.772960431380897	0.209053765254876	0.83440626715235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	2.06621232759638
Merged-chr10-93078547-5	13.0014076124048	0.602932067510372	0.633950440107231	0.95107129732158	0.341568184052701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05997137679559	3.32613381415979
Merged-chr11-32682530-3	4.12815233882523	0	1.39799941280963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31024455-4	10.508511337025	0.158842695113275	0.554051533363395	0.286692997940125	0.774347399472844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26720816040186	3.40338940142553
Merged-chr1-4769997-2	2.68723910143594	0	1.39364974836714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81787555-3	3.51434977878012	0	1.40514175900158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34294502-1	6.21500889344391	-0.665285882396509	0.577373846873358	-1.15226189409032	0.249213470603338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49998132607461	3.83567539701181
Merged-chr4-145295797-3	3.82721039902602	0	1.37060089025386	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76473647-3	12.3588569360245	-0.0933041701778095	0.526676991989096	-0.177156343635648	0.859385585934851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94217339429598	3.8369348447355
Merged-chr18-82479819-3	4.16107374114051	0	1.42470601906541	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-14658051-1	3.67999629122508	1.96211940409297	1.2140043163078	1.61623758477272	0.106042955582988	0.946378102534169	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.61028830508622
Merged-chr2-4551257-3	4.0471356830181	0	1.39052934565788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133297963-3	8.90825669620976	1.50951735421814	0.607799856049568	2.48357636020078	0.0130070444250892	0.241995150827261	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31474998843974	3.46667461521491
Merged-chr12-55863238-2	3.2791991996893	0	1.39154049332465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130621477-3	4.2349739848999	0	1.39736720406763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14010414-1	1.44819995912694	0	1.58932225950527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-92406849-1	3.78905361394259	0.432579092870836	0.903750560890601	0.478648768355453	0.632188518001285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67122493558876	3.01781028357557
Merged-chr1-171699209-2	6.50712315499986	0.453274889401896	0.661274690104066	0.685456280400756	0.493056039922345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37528155229931	3.17685264281447
Merged-chr13-48842013-1	2.66689572576593	0	1.4187301286285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83827733-1	1.95367381461551	0	1.63076836284949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18652764-1	0.934913340729409	0	1.89713344049665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-84343863-2	3.18605529813009	0	1.41630315262973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42603590-3	8.79288564984056	0.556611975874003	0.614456040523773	0.905861345914245	0.365009245963691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69153606396365	3.66747996867402
Merged-chr1-170854422-1	1.80535439316438	0	1.47779977182053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-79706987-1	2.84505094019527	1.83360391270979	1.09100206504051	1.68066035020905	0.092828906244157	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81518459389541	3.03065185886086
Merged-chr17-88341204-1	7.46391708701614	0.886008426205563	0.67469975511914	1.3131891919082	0.189119205016993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14431762525547	4.63965117973956
Merged-chr9-106303188-1	5.21495075798121	-0.0353024836729196	0.728611091429814	-0.048451751679545	0.961356215828089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5473977117727	2.69183936567274
Merged-chr16-97778828-1	2.34099109593179	0	1.42519796516181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82083593-1	2.94090629443146	0	1.4026006521397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30244625-1	4.62454625235375	-0.0197790668490802	0.71368581100908	-0.0277139695703275	0.977890281877658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37868653224879	2.96817048781349
Merged-chrY-90800413-1	1.70281649070634	0	1.51109280425322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126645862-1	2.53918828351548	0	1.42885628077044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105584172-1	1.1638354457189	0	1.55898505644663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86801833-1	2.58148159211489	0	1.43710937414731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135662064-1	1.50954294436354	0	1.6899371888595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121942911-1	4.59503215819689	-0.68185105881009	0.90678676505646	-0.751942005646318	0.452085935666708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93471588347247	2.83479473244407
Merged-chr1-165700595-1	2.67398372841455	0	1.42414574908728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35726262-1	4.27878874397008	0.600556310603921	0.904332127075491	0.664088217838785	0.506633850626952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16318252143804	2.66136271091996
Merged-chr1-120083427-2	5.42044846714518	-0.287009786393817	0.849416643427709	-0.337890467080592	0.735445731679065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15768836563541	1.6776376524744
Merged-chr14-9401045-1	2.48197053696525	0	1.4354912516001	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153910031-1	3.46100214421981	0	1.39535443789083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9217997-1	1.05342160366024	0	1.85689177290495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118887311-1	3.07196953615191	0	1.3994500205472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19707282-1	2.82449348489459	0	1.44683645846633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88192442-1	1.65495194757384	0	1.55381456332006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29603438-1	2.3077829354094	0	1.45383642715624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103214417-3	3.75572077614607	0	1.38605267577841	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121736661-1	2.42856135191048	0	1.4305634711337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156705656-1	2.14118403968318	0	1.41908115541407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42583669-1	1.37313660327404	0	1.52993594180317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169213947-1	3.01944866906917	0	1.42019183245183	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115616148-2	3.53210242893441	0	1.39926854907569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155510459-1	1.29422006845473	0	1.58948235398484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18687726-1	2.36254405523796	0	1.41057189302759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27381449-1	1.88907328139372	0	1.43799766298495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55203470-1	2.6061872877594	0	1.41513949262988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-74999671-1	0.923677277407109	0	2.01391121573917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74121414-1	2.41114250521368	-2.63774847941189	1.39460399289376	-1.89139604708763	0.05857149586256	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0
Merged-chr11-76777830-1	2.11346549762314	0	1.46710034464507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143058459-1	2.4167464293479	0	1.43719696381641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34080728-2	2.96456297142423	0	1.45477970395586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32934868-2	6.09710507347829	0.275593384818179	0.821343967345022	0.335539549537363	0.737218115869871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93987555334551	2.51778132121293
Merged-chr17-84291474-2	2.67632834395767	0	1.457250666329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136981454-1	4.69503558499196	0.917200787686815	0.902592484523609	1.01618482694426	0.309541380399029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	3.16738396458542
Merged-chr7-89670155-1	1.92793959331259	-2.83506941040704	1.49393729480715	-1.89771647060529	0.0577334416882908	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24389189810066	0.67591700901439
Merged-chr16-57499596-3	4.51938473594578	0	1.38752349440601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65769627-5	8.25451400177154	0.913371571420026	0.893761274392611	1.02194131429642	0.306808676977422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.61354141164132
Merged-chr1-92753943-3	5.54767751874241	0	1.40383045575284	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129880144-2	7.35970495285597	0.415512283917819	0.619520779967896	0.670699510578726	0.502411974705386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54285623109253	3.37623235772255
Merged-chr4-124843695-2	6.46196003908322	-0.996675165382376	0.776600339833739	-1.28338234515292	0.199358156077859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22687404814607	1.39284430389808
Merged-chr9-50670876-2	3.52199661583812	0	1.37708321007589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88344336-2	4.25688271218705	-2.87108017601166	1.33608658548135	-2.14887284043594	0.0316444812988046	0.438229835012345	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	0
Merged-chr7-123084954-2	4.29382822281212	0	1.38416713379323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128355555-4	4.25591817093275	0	1.49097124530908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61389615-2	3.35867031152064	0	1.42764163683435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83896090-3	4.43063159226967	-0.0364003234419184	1.28808075746094	-0.0282593488265989	0.977455302577488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.724326877898254
Merged-chr15-77799628-4	5.47949010337387	0	1.38830975624996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41393614-3	3.95221753365487	0	1.37816360655044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174106782-1	2.97263452937336	0	1.4141380508238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21859738-1	3.24189502904722	0	1.39102750184015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41788247-2	5.95487621853246	0	1.39774493406859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45297459-2	2.85987390694691	0	1.43457183474894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149791732-2	4.10261732869872	0	1.42628542611734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100503656-7	18.7160381979646	-0.366417239381579	0.510712337838009	-0.717463065280013	0.473088418418718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37294042980751	3.80803925578311
Merged-chr2-181072319-3	3.46645004627497	0	1.3874475769224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4337258-3	3.29174172340606	0	1.45295663753757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122199480-3	3.66287784875256	0	1.38548573320115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9188794-3	3.83316430005229	0	1.40925842347589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-163910514-3	4.24534663925663	0	1.36450927649481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80684390-4	4.83270696848832	0	1.3821822436046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122715947-1	2.56223455580465	1.69411584737563	1.32936551735684	1.27437926232961	0.202529038111574	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr11-99194759-4	9.93586561258801	-2.6724797114202	0.707675432837952	-3.77642007537679	0.000159098579840319	0.00860541263834819	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35269597941206	1.99694307423758
Merged-chr1-39782084-2	3.19167774679961	0	1.43722985646333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31082152-2	3.16752569026692	0	1.42819152426233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24573370-2	2.35013529193573	0	1.463531849128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84528926-2	2.78662740275964	0	1.40353503557886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84837970-2	3.0232220768471	0	1.37923661749086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84620629-2	2.99379382083982	0	1.40875765206839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131862262-2	4.93309381788336	-0.126675153214271	0.741640850365957	-0.170803904816954	0.864377958596977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55100800168893	2.13118170172995
Merged-chr9-90277977-2	6.9371987071318	1.07822547105961	1.0516061881855	1.02531297663819	0.305215534761034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98095685408011	4.0976129889856
Merged-chr17-30550180-1	4.17261431184957	-0.483607714425176	0.851585772864169	-0.567890786618758	0.570109128407539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22017310661124	1.86852815722235
Merged-chr1-156982109-1	4.70366053022197	-1.54502359570617	1.05551529447798	-1.46376239528607	0.143258880504509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2225961074789	1.46460328489499
Merged-chr2-150875630-2	5.18091682951339	0	1.38068479295578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91041072-1	2.91530393441552	1.69085912842422	1.34157344353775	1.26035524672089	0.207541238393689	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.52633957112176
Merged-chr1-135685145-3	4.3561219507354	0	1.36127287420725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35182894-7	13.7796847565345	0.523085122562754	0.511001260394638	1.02364742145408	0.306001838067993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08908924330361	4.18394624228599
Merged-chr8-119836899-3	5.89422009542026	0	1.35661696848366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127732913-1	4.77620432910223	0.868872110450689	0.943474052423263	0.920928464560353	0.357087776319439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92049674076937	2.79336490493664
Merged-chr3-67564922-5	9.12776022896542	4.69266169870677	1.05334702254536	4.45500067714359	8.38929299699766e-06	0.000767733296336357	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.97298273882007
Merged-chr13-34279176-2	4.20090552531393	0	1.38015894117827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134551133-1	2.95136148929906	-2.73053905751925	1.21088956791901	-2.25498602833937	0.0241342057745294	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	0
Merged-chr7-104231398-1	1.78107199359355	0	1.47740497286209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118279165-3	3.56894797383623	0	1.40503602925899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104146453-1	4.02180704773135	0	1.39390487028948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83643593-3	4.05294200511022	0	1.40060063237293	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54888238-1	1.97934254337324	0	1.48842125059851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80056086-5	12.8481866822877	-1.18461042300141	0.545325618251992	-2.17229923435214	0.0298330997513295	0.421767872401176	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07611070287923	3.02612310184552
Merged-chr11-115579192-3	9.75708681773349	1.72944203173828	0.658142704844562	2.62776145508857	0.00859487639212901	0.181871604065052	C57BL6J_F1_Control-BALBCJ_F1_Control	0.993458951033742	3.85249262470754
Merged-chr6-72428204-3	3.62261113436504	0	1.39055419604903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53951101-2	3.28348893929593	0	1.40782217396156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101988364-2	3.48657202534363	0	1.44363470746531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11954425-3	8.83553047684067	-1.37244018537204	0.539819587512485	-2.54240530932994	0.0110092427098149	0.214421864730501	C57BL6J_F1_Control-BALBCJ_F1_Control	4.95786256041652	3.6407379140302
Merged-chr5-105650923-3	9.76989732605773	0.639586433451941	0.610046638817021	1.04842219062497	0.29444413407778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56170723725796	3.46530041716785
Merged-chr12-54830759-3	4.47181323837334	0	1.37453211220749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121488298-5	10.8153706023902	-0.623214749113972	0.575485945161121	-1.08293652408746	0.278836598715781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.43114946799354	3.7989056045494
Merged-chr15-94688288-2	3.93184940890401	0	1.37657945227706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121641410-2	3.96112607948945	0	1.39215073208824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12077375-3	7.14703020322493	0	1.35234992588402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61907148-3	4.2238280561922	0	1.38873584336458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165873950-4	9.95259317521397	0.520814792866278	0.632027956084334	0.82403758861069	0.409918200390889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42844712608471	3.12805120375092
Merged-chr5-134187537-3	4.13667290506404	0	1.37850738399573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120745005-1	2.49274504368086	0	1.4627055026448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35462400-1	4.66882908549294	-0.318412790839873	0.918306304395977	-0.346739197276133	0.728787259784359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55996558715718	1.67279875369265
Merged-chr14-47504494-1	4.85447433438619	2.32097804673899	1.16570941724758	1.99104340446969	0.0464761156212366	0.561920633686566	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.53933126993545
Merged-chr13-87039344-1	3.61083044107308	-2.90745690782822	1.13336735626291	-2.56532614228017	0.0103078864582633	0.205348190940542	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99778999098554	1.44059547810395
Merged-chr1-34184443-1	1.47724925720601	0	1.71456769295274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103719350-3	3.98187095607673	0	1.38110062845643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101974027-1	4.40937124519169	-1.14817601379869	0.964587146951727	-1.19032895827727	0.233917123262495	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33585072537423	2.56363252850282
Merged-chr3-55307701-1	1.84324729720527	0	1.77590195442525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34178559-1	1.64186685310585	0	1.59355792147424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75262544-1	2.43644054110307	0	1.43363955132137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103026399-1	2.38927171116295	0	1.44731831258051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45229606-1	2.8324416025492	0	1.39169056565436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129657894-1	4.51587941448243	1.11775311019253	1.11147449980483	1.00564890187656	0.314584491370458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03338881410105	1.44501253210894
Merged-chr1-154058057-2	3.71388783574491	0	1.42748916958616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115846422-2	5.12559191016772	1.62678491245055	1.38674135740309	1.17309900924639	0.240756103782655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr9-44194110-1	2.31738232176469	-1.01483777435304	1.32244748997855	-0.767393625866766	0.442847517179507	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	0.577068348605183
Merged-chr2-52286675-1	1.31347527716168	0	1.56890320791296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67743086-1	2.81892597011687	0	1.42191706060134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38118952-1	2.55364059450759	0	1.43304207158035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6389792-2	4.29608687346082	3.30325019270802	1.12064480627298	2.94763351796893	0.00320216436464317	0.089632570905066	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.02497645810754
Merged-chr11-119058866-2	4.50132071570569	0	1.38310210724709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139289071-1	3.00400675727811	0	1.42727801145967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90819961-2	2.86396544396673	-0.706220715845551	1.43984965641529	-0.490482261602082	0.62379267892486	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.41385117919798
Merged-chr12-98239108-1	1.72049300244374	0	1.47995885201202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8916745-1	3.85804429999236	0.333578942987181	1.04409162744936	0.319492019873858	0.74935344178554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	2.1304360554358
Merged-chr10-12592135-1	2.91122068140332	0	1.48080521726505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95711514-2	2.79819792681868	0	1.54278066851661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92551112-1	2.07204139865282	0	1.44060423045544	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56513393-1	2.24499951794562	-2.79151665408516	1.65942983291964	-1.68221433573585	0.0925272852390142	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	0
Merged-chr11-8609379-1	2.27001557843023	0	1.41708543312558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44348772-2	3.44748011474602	0	1.40750569915683	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144724831-1	1.60127662071438	0	1.61685107899534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72270345-2	5.44190989474874	0.422077438238916	0.858210110402934	0.491811309518071	0.622852740731593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.51436894928421
Merged-chr14-8176424-1	2.29306423906562	0	1.4444357259615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73812184-1	2.96727666128693	-0.167175842598788	1.09442472755192	-0.152752252749934	0.878593652512732	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	1.25298535761957
Merged-chr11-98362519-1	1.75138162394504	0	1.50210546989706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72216737-1	2.04215782645516	0	1.47892543495688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12795034-1	1.92300617549883	0	1.54571838226024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79323822-1	1.63011482774176	0	1.47306882606089	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53870086-1	6.30942672427495	-0.990143204545167	0.620697774893163	-1.59520985026182	0.110665316770233	0.968307815001739	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69900421551142	2.22289631259123
Merged-chr12-3377395-1	1.97906015766631	0	1.44246141172383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93586267-1	2.08692477551239	0	1.45966133680359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83574847-2	6.43767984982986	-0.146104421548983	0.778932095656787	-0.187570164798241	0.851213616125512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62606662475342	2.47883038275468
Merged-chr10-75486671-1	2.56401466174046	0	1.40718556373116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138517564-1	2.60442994840277	0	1.43516946232859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34282498-1	5.11817058715959	-1.34489220625737	1.44966363614928	-0.927727075937273	0.353549159805323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59691053465216	1.90955659479368
Merged-chr15-57977041-1	3.18292444862054	0	1.38974868879222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67972762-1	2.36503724597244	0	1.42245817954466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37236848-1	1.4075852460205	0	1.47843685347987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65524251-1	2.71631705779005	0	1.43122897697846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100070394-1	5.05951694163228	0.19017620896656	0.953721364194202	0.199404371241321	0.841946441390481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	1.40024388691264
Merged-chr5-45677870-2	4.61793893866895	0	1.38004855808911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24830484-2	4.51639402431951	-1.84289997185546	1.19142622690867	-1.54680158135945	0.121911098789302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.303163067301871
Merged-chr2-167920142-4	7.15041330923699	0	1.36498360920213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16698828-2	5.52630149451311	1.59614044141869	1.0528477888485	1.51602202932334	0.1295137821649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	2.96435767992576
Merged-chr9-107306331-3	5.80118440618858	-0.312079591434722	0.984734950017663	-0.316917350632395	0.751306316235721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	1.39479953640345
Merged-chr1-53909296-2	3.40726893012106	0	1.39039362798137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121136969-2	3.05712772449965	0.644979891305446	1.3843290770903	0.465915151230602	0.641276235600581	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.724326877898254
Merged-chr11-113787393-5	8.27446713624722	0	1.35429858828832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29486060-3	3.93354960281774	-1.88577162777555	1.28490418369097	-1.46763599318242	0.142203125594667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr17-69218592-2	3.49765781443274	0	1.37960616588465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23491003-1	2.94770604015637	-0.0345640758936978	1.33764614225084	-0.0258394763771659	0.979385374755431	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.679405493272835
Merged-chr5-104948138-2	5.44670969735411	-0.596601881454844	0.844744683214352	-0.706251123339071	0.480031982904873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31653289104558	1.62144175773092
Merged-chr13-113914433-2	2.80976116039632	0	1.40574994391891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79650765-3	7.23281482076629	-0.141471228300413	0.563206461250542	-0.251188929875361	0.801668042929437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92326567439373	3.37579860124573
Merged-chr17-15724098-1	3.87592011323313	0.764044165949447	0.864332710777467	0.883969976402014	0.376712420392652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01927470790114	2.98831297976427
Merged-chr3-38235554-1	2.60418876442233	0	1.45129330405204	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72155332-2	2.92603189941437	0	1.46437379353518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120197074-1	2.41679600540433	0	1.42535683746846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24227845-2	3.47584015376488	0	1.40362098231007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113645310-3	7.70114912993284	0.0628193394630217	0.767848500453535	0.0818121536031093	0.934796091297056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88169983067447	2.15763548802947
Merged-chr10-99128096-4	7.68203899538516	0	1.37866718672398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79812425-3	3.5008454611552	0	1.39408589596986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79368427-2	3.7821348672168	0.836507211162452	1.17705437927377	0.710678474921921	0.477283501278829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.897114879832661
Merged-chr5-140835733-1	1.26236927573844	0	1.67961894377373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182412999-2	3.08018672027855	0	1.42135354526936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-77049646-1	2.27893287981634	0	1.45514731782792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3795286-1	6.1084132945332	0.345328623235995	0.83666940409119	0.41274202396716	0.679795632086311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	2.34700485079215
Merged-chr16-44777625-2	3.00008824363769	0	1.42840268851478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21935978-1	2.78238695008764	0.183659378517441	0.971858475016109	0.188977493368462	0.850110456635201	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	2.1881845164991
Merged-chr2-181890172-1	2.85911954006737	0	1.44319597172516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74693220-3	8.67960126824316	1.96406449914368	0.802964616841787	2.44601624772548	0.0144444490961228	0.260426470453114	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45547307112966	3.61006157870386
Merged-chr3-51727935-1	1.95123557059944	0	1.45910671959884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130163902-1	2.28091336420658	0	1.44030651725095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77871665-2	6.27715694189464	1.85181910235476	1.23418023268838	1.50044462980985	0.133499266172706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.19124681800816
Merged-chr1-6499041-2	3.77467907614409	0	1.41352942367337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50149652-4	10.127029517907	0	1.35524635314204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61152413-2	9.77988660671353	-0.0848985664741778	0.577516678185493	-0.147006259180119	0.883127079887871	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63474810522905	3.0808438377813
Merged-chr9-120434040-2	3.23854644463939	0	1.38080046639009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-33169212-3	8.18201294934424	-0.587720924561858	0.748606052108288	-0.785087060018642	0.432402526038675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13634941273677	2.26452078935009
Merged-chr10-29206915-3	3.86507109668712	0	1.39438728165717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192745232-3	6.70615572231954	0	1.35370773723575	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-24049457-2	3.54039782983821	0	1.41893112410939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38025096-2	3.94912518157343	0	1.39143228112927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-7187718-5	11.8048190520845	-0.875489776532278	0.467340516226022	-1.87334448038496	0.0610208313356356	0.674467541800288	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28016880277167	2.8600720682784
Merged-chr15-80006379-2	6.25979928675462	0.733864952022337	0.734596635985875	0.999003964995625	0.317792770541887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01585784396829	2.90348211998839
Merged-chr6-134469386-4	8.44601440801125	0.316383487049289	0.654264033067672	0.483571572115694	0.628689953955998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25496984757238	2.8394639875232
Merged-chr15-19855547-1	7.12664208584957	0.545712340960699	0.87978176854828	0.62028148396525	0.535072483097353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96957983505352	4.17201057631939
Merged-chr4-45819249-1	3.36342607337569	0	1.39162181587154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139116506-3	10.8990667427439	-1.37987973955383	0.526798743653048	-2.61936793923454	0.00880928741088727	0.184651871818612	C57BL6J_F1_Control-BALBCJ_F1_Control	4.92412230323714	3.32556824844872
Merged-chr6-124260755-2	2.91034743710834	0	1.47124861335382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130886486-1	1.71535666301095	0	1.64541546547842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101628606-1	1.00730573736355	0	1.64261215436247	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-61138606-1	0.881872646850327	0	1.64083285689428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129427972-1	3.36262727093	-2.95918520748361	1.13843479054362	-2.59934537495166	0.00934017469252301	0.191448927643612	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20584205260395	0.465515277017237
Merged-chr6-91510424-3	3.73121626530536	0	1.40039868405735	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133139125-1	5.83459469853324	0.443569290785978	0.928020020605626	0.477973837780466	0.632668826025453	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0532959332	1.23889576308175
Merged-chr7-88315910-1	3.07736100024063	1.57078814440354	0.973792390849214	1.61306266013611	0.10673089514483	0.949400217505782	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	2.88876299338375
Merged-chr7-24850402-1	1.4615839309277	0	1.48465907827197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56753861-1	1.96742931769562	0	1.44819671146255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100497283-1	1.7983859503467	0	1.48125358783609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50112599-1	1.09794380335818	0	1.67413743045917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8098469-1	2.42172941213479	0	1.40626252921107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34593677-1	2.7590039338357	0	1.48536165821173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80775038-1	4.23701862551177	0	1.37458170749995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117348470-1	2.5113935493755	0	1.40733296066832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-12440615-3	7.79382381417918	1.07518295023549	0.893487177363427	1.20335576992635	0.228838676036132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.86404794779727
Merged-chr2-68451249-1	2.30912006322741	0	1.42923046294415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120367112-1	1.13653039797886	0	1.73314255642608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135748550-1	4.06461747853026	0.992186585079525	1.15107609977066	0.86196436992933	0.388707124936787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84977299032034	2.32024541896579
Merged-chr18-66041355-2	3.39251755239639	0	1.40431474967966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78306232-1	2.39770182327237	0	1.4730489874054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29243293-1	3.01694092050141	0	1.42843223197431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45967675-2	2.8830232091737	0	1.37714337696191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134589191-1	3.40754374838813	0	1.40050450580152	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83875401-1	4.39472619469346	-0.0356942491300396	1.16133351784663	-0.0307355712906872	0.975480422767142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.724326877898254
Merged-chr3-136152497-1	2.74959109389954	-2.82710149234424	1.26943827376062	-2.22704920024914	0.0259439857626883	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60308582214967	0
Merged-chr5-90977450-3	3.76153617019619	0	1.41029498432012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98782795-2	3.97508372772634	0	1.39585205702006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12226648-1	4.59974902106636	0.0521049039269686	0.757136531028069	0.0688183726338214	0.94513419351108	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84007006085556	3.55304996627438
Merged-chr12-55480769-1	1.62090310348244	0	1.69258092598728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90803111-1	1.6325716215734	0	1.71738765115886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117268710-1	2.0195840620218	0	1.45112157769895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150197862-1	1.27789989708306	0	2.22433968831006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-14056326-1	1.79733642961265	0	1.41533165045577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152816449-1	1.17089978225432	0	1.61035808273297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-33308466-1	1.48846080465627	0	1.67461050227128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94603623-1	1.84110490520918	0	1.6127561731585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116333433-1	2.18444322261011	0	1.42520200223932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99007708-1	1.38819632786602	0	1.50807882495816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137033803-1	1.40504558467978	0	1.65756138888065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104672219-1	2.06968247924434	0	1.50990124446821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46908722-1	1.66197012076099	0	1.56869872303922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32931385-2	2.03979406510607	0	1.51849732143706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8609720-1	4.2609970628309	0	1.37582354529231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38091234-3	7.96053581148536	0.246370541453619	0.790449734886495	0.311684007951495	0.755280682759288	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63267172601457	1.88744669294464
Merged-chr8-122702364-2	3.21067271301095	0	1.44114032068263	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36029788-3	10.3560058978707	-0.819179506577447	0.550579298750506	-1.48785017605367	0.136790409765697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06995268231939	3.27586133317915
Merged-chr11-107326384-2	3.53645034873594	0	1.41251778298606	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71189283-3	4.72681315977118	0	1.37982969889623	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34602547-2	2.93801822705641	0	1.4038093376349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-49688777-2	2.93538072097516	0	1.39304152241797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127261280-2	3.52594618078706	0	1.37522359457653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149426559-7	13.6723820354515	0.226296531589802	0.400514340864243	0.565014803468689	0.572063695259577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51587914695551	4.71991476401105
Merged-chr10-128612822-3	3.44390413947028	0	1.37131975722166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15774977-2	5.05299881423191	0.518654862022648	0.791610213800932	0.655189704453555	0.512345622188654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02938698498506	2.23869582718247
Merged-chr4-136454939-2	4.55623207629319	-0.328978491368819	0.988752468114096	-0.332720778939039	0.739345063047677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86449426151314	2.00450053151183
Merged-chr1-181950895-3	3.8029631711495	0	1.40226873280982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153586703-5	13.8433444515241	0.176120806333672	0.434633837171888	0.405216509325804	0.685318370690629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37442501174292	4.21111360249856
Merged-chr19-37546979-4	10.4041453900444	-0.578116763499423	0.605730895638706	-0.954411881021578	0.339875194573607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13344196072648	2.78310459450287
Merged-chr4-133094083-2	4.30845487603126	-0.127037134711791	0.955040782254669	-0.133017497338575	0.894179542592007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01966053530494	1.79957942362569
Merged-chr13-23427071-1	1.91690777892367	0	1.44986597150411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10970794-2	2.77194071607243	0	1.50637286774072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41473705-2	2.45241131762281	0	1.47088866318644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92690788-1	2.30902307820053	0	1.41221723730425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65906602-1	1.86899988453795	0	1.53388952519396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60684278-1	3.24899160393711	1.81501480038905	1.16671751184546	1.55565917367448	0.119789159600033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.45526469271556
Merged-chr13-46838807-2	4.51259437318508	-0.286707008133423	0.862035709107474	-0.332592960018177	0.73944155821542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99468681090207	1.83150711868652
Merged-chr16-73435107-2	1.74061103444296	0	1.58040069325364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43299652-2	3.19482837018764	0	1.38015995664049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48320438-1	2.62651752599029	0	1.39191088011054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102057217-2	3.17110468380002	0	1.39860231102741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99328515-3	3.10003476367159	0	1.42667320812331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81658215-2	3.32269531584017	0	1.38562695609523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25326104-1	4.3415082773646	0.0443423482219269	0.939012112614144	0.0472223389094321	0.962336023505399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	1.55926189265627
Merged-chr16-94599497-2	2.43375469366594	0	1.44477622404679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191272884-1	1.39755716065542	0	1.51829935915866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75365690-1	1.88827711710356	0	1.52642493973558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28311069-1	2.03323358233821	0	1.49913842326905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60813670-1	2.22183849367664	0	1.42996329638462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77371939-1	2.04791000205337	0	1.47016731664186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113061370-3	4.85603110605771	0	1.37206618927881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152520999-3	3.95928295392944	0	1.36962996087055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87637422-3	6.09107053928715	0.120502278259039	0.842224859919271	0.143076135594702	0.886230052052342	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39472255525023	2.99071828288391
Merged-chr18-5141547-3	3.58187545982806	0	1.38551123707108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133085491-3	7.37704572923982	0.0352983366907306	0.62371830753374	0.0565933952304601	0.95486909595683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77917504929676	2.79294198151659
Merged-chr14-12993841-3	4.39789783385333	0	1.42258953050034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62213698-4	3.73657587740735	0	1.37807513113316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98814123-2	3.34907507411728	0	1.41504916619776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38248055-2	4.18992400270515	0	1.38398631529926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69457367-3	8.50877454608385	0.0678209189575933	0.723059748343673	0.0937971158164342	0.925270322830591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93355916516178	3.19052618081987
Merged-chr18-16252150-1	5.20286865543737	0	1.39290371233415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31124470-1	2.43248290030098	0	1.40116521162364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107116220-3	3.72669474412597	0	1.39854608745602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83289421-1	4.19951613897116	-0.0362332438527891	0.798011036129995	-0.0454044395532479	0.96378494238713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08153858449613	2.05607979245859
Merged-chr15-80038027-3	9.36700853719067	-1.37932336383816	0.732925311145082	-1.88194259751131	0.0598438099030637	0.665245329758822	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1819016518161	1.70266130792036
Merged-chr8-106198959-2	2.79142972621027	0	1.44112615569428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74508819-3	4.16253535803521	0	1.38401169619252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98153848-2	2.73331334258189	0	1.44190742987181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38451184-2	2.78529180639962	0	1.40598165143762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122849542-5	10.2068559035407	-0.615271983472073	0.618696415838899	-0.994465084524237	0.319996495683822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9338379668399	2.65973367501489
Merged-chr19-55545731-4	4.28938307862345	0	1.3782015755078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66212985-3	4.68103024112406	0	1.42766743446123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105504809-1	3.94217541344436	0	1.39633897102439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6238398-2	3.37770209148181	0	1.38491188241643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97223029-2	3.93935580541561	0.615414322035325	1.45868718609597	0.421896022602638	0.673100913308168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr3-126793598-2	6.23074153977546	2.28594730190498	1.17995330569877	1.93732013874163	0.0527062220083439	0.611930269575303	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.31037834433945
Merged-chr8-86903295-7	20.2580333906337	0.153173592929239	0.385295730503449	0.397548119023	0.690963309935815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.00099867613939	5.10992764069572
Merged-chr4-53395073-1	1.60731753386865	0	1.50197873305797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95229627-1	2.25221271663946	0	1.53631453802107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76611048-3	4.05644249966891	0	1.38762141840422	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-93651201-1	3.72501838403017	1.66908150509276	1.06237394010508	1.57108664104437	0.116162525180991	0.996446063802034	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	1.85238217463322
Merged-chr4-154906318-1	1.85348804294163	0	1.53699999477907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43092193-1	2.95843757112312	0.920575999858074	1.04683950509045	0.879385995065725	0.379192023041428	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34557707159302	2.29551975980701
Merged-chr4-155835797-1	3.29319502405049	1.54421754318115	1.29354749369665	1.193784960124	0.232562096310127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65013357957091	3.02030420879797
Merged-chrX-159237457-1	2.034476540523	0	1.45944192069719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62557939-1	2.23687307976937	0	1.47197390558805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21452034-1	1.63644789788728	0	1.45929800702849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69332136-1	3.87289525295547	0	1.38203330945417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60037373-1	3.2229114183214	1.54191654965521	1.31189808212959	1.17533257396964	0.239861687343581	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.94927122251658
Merged-chr12-3698989-1	1.52993040353728	0	1.53687151331701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119026493-3	3.60218918242478	0	1.42999695800614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4620314-1	2.42380472090066	0	1.47171023987921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49323160-1	2.51520452409887	-0.0377716711440971	1.4227902760792	-0.0265476028190079	0.978820565403701	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr8-33593954-1	5.61456850802311	3.46475524988277	0.972432189353749	3.56297877406274	0.000366670337702315	0.0170212065646116	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	4.12376582848444
Merged-chr5-135101244-1	1.37828848638314	0	1.63367294275286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159510341-1	3.14293532531233	0	1.49726241510017	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114015538-1	2.84489308875353	-0.819921285631831	0.975626356614299	-0.840405017836122	0.400681336664906	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	0.788686275880602
Merged-chr1-88745435-2	3.95624676662483	0	1.36135244142238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104793533-1	1.68460060196764	0	1.57913613029019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57216618-1	3.30311620470695	0	1.42290846809234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60668154-1	2.36728360677098	-1.21854146923119	1.16310042918512	-1.04766659753097	0.294792242197211	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0.723581231604105
Merged-chr1-156522347-1	5.51310707687661	0.901881112445279	0.80645878466847	1.11832263420137	0.263429223389365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97817938885471	3.11110901692563
Merged-chr16-64748435-1	2.49443121906437	0	1.45143197986632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55335176-1	1.80025929337892	-0.035310888927408	1.45741671789317	-0.024228409413646	0.980670417343018	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr5-66138225-1	2.43994252088601	0	1.45130952158708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63278293-1	3.19604874706444	0	1.45875218500969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-114119481-1	1.97017173855451	-2.39210543010473	1.71483785894022	-1.39494554405457	0.163032261632942	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86719832675847	0.600815099743027
Merged-chr16-50415478-1	1.85079368467587	0	1.56019640088443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152464419-1	2.23359236201488	-0.687328680372877	1.44720040538894	-0.474936766057742	0.63483204488461	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr3-159528641-1	1.70598050571408	0	1.4869740784657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-121102213-1	4.68520033445638	-1.66581119624303	0.995969094323778	-1.67255310002771	0.0944153062424297	0.877920224432472	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63489024549046	1.25298535761957
Merged-chr8-25362872-1	2.432694822956	0	1.42443157829921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17386343-3	5.09836968185145	-0.0378472036730532	0.841901449814335	-0.0449544346091809	0.964143628123044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69757189012738	1.6752866187284
Merged-chrX-137019479-1	2.3560061673566	0	1.4183612434342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160181383-1	3.91335512232903	2.20210972115345	1.28104958116627	1.71898867423121	0.0856164342185518	0.825689923646582	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.09982365757507
Merged-chr18-27022087-2	3.72606116759895	0	1.41064335891554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99208156-1	4.48880393968853	2.2157369612439	1.14402531651152	1.93679014726734	0.0527710008016643	0.612290038970687	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	1.38992070941417
Merged-chr2-122573856-3	5.95061715075021	-5.14015932975766	1.05820839339126	-4.85741689619837	1.18927025133619e-06	0.000147934877785776	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35476561952894	0.413263464506793
Merged-chr11-72940322-1	2.17797607079409	0	1.4965212261229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97746423-1	1.71789040848694	0	1.81693983968697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82861910-1	3.64923789588303	0	1.413711699069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79588415-1	1.24921487177127	0	1.57401065113238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146453863-1	2.1452363704868	2.50836898913432	1.52525111169515	1.64456132495229	0.10006030800358	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.25298535761957
Merged-chrX-42450507-3	3.82393623748443	0	1.3893586056608	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117114612-2	2.6859445837596	0	1.42162063835657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3661408-2	3.00634904980736	0	1.40204433563092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138258844-2	3.26896841465334	0	1.44096275277406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170908026-4	5.09739719755045	0	1.37688913047359	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-84466943-2	5.88695874598005	1.91723463302921	0.967963725648112	1.9806885136584	0.0476262156787042	0.571125845594238	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	2.60001621642925
Merged-chr3-8957846-2	3.53878242051794	0	1.36943827902616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112383427-1	5.38299611395435	-1.81744340994866	0.966766888786048	-1.87991896601961	0.060119122652463	0.667722908886589	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87613034754277	1.27277412794229
Merged-chr11-118469987-2	3.95486192533991	0	1.3808614852763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49753393-2	4.90470286878209	0	1.37858043822217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130932315-3	8.07528105556653	3.24782713576909	0.866717069972119	3.74727491622332	0.000178766126101169	0.009462071907238	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	4.07766517290984
Merged-chr3-97231478-3	4.19450304369581	0	1.41129433860473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4044707-3	2.93153045691	0	1.41042035908882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64882838-3	3.49973518020138	0	1.41380826226881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65905694-3	11.9939354970642	0.560104609250107	0.468981162214871	1.19430086830116	0.232360298105723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39223617595758	4.27072502423156
Merged-chr12-72104717-2	3.18191715238133	0	1.41888025320619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149990516-2	3.0213389743235	0	1.42277179280582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15990321-3	3.71429206379506	0	1.36025888725527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120342122-1	2.98168959868046	0	1.42397643677099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109124831-2	2.8001305857931	0	1.43314845126791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8846447-1	2.50348129441197	1.73370238780532	1.18288891277155	1.46565105910343	0.142743373545794	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.70340695421451
Merged-chr2-72202394-2	5.97849230124951	1.13248705447924	0.752258704691768	1.5054489199208	0.132208699989753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93177134892138	3.24029886222938
Merged-chr11-94611604-2	2.9067565060102	0	1.48989210164906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-74980887-1	2.08991354191264	0	1.44479983461312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-25420797-2	3.09430496532036	0	1.43701519936661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-9972117-2	2.23043610638777	0	1.43630364722327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77831061-2	2.33910862451805	0	1.50799359336411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26233083-1	2.09804379595144	0	1.4283731532276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52799046-2	3.78471277616059	-2.24278799066861	1.28796850537419	-1.74133760360624	0.0816244184591742	0.803226242400842	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	0
Merged-chr8-106964860-1	2.6758083506553	0	1.45027331964979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37452275-1	4.2980379635454	0.0791358921625084	0.721922758088252	0.109618226154929	0.912712155386551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13939166524368	2.18893016279325
Merged-chr11-80094695-3	3.57089617874903	0	1.38695253732188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52390465-3	4.13770410544312	0	1.386602370303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155163764-3	6.92892094436008	-5.03853395751551	1.0887231365007	-4.62792953377479	3.69339634166382e-06	0.000391363219759266	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76322113178887	0
Merged-chr1-184174615-2	2.84730323570238	0	1.42192640480123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75229967-2	3.51566230141328	0	1.39499115079145	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-119772966-2	2.59746623673008	0	1.41296669989715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6360338-2	3.39336400892533	0	1.37722110913944	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82236742-1	2.37543096299723	0	1.41249700797818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39313845-2	2.37532468595026	0	1.40995547736695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57563066-2	2.81437884719586	0	1.41254349838446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-112752729-2	4.48921061067894	0	1.39705582470472	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32572696-3	3.33358949251342	0	1.3737563860703	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181277010-2	3.06782200573189	0	1.4302576856161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-55980272-1	3.26772290510272	0	1.39168206041761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142314252-1	2.07574409691926	0	1.50681488647792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26350797-1	1.89597905969436	-0.0344752608950993	1.38827901463939	-0.0248330922902082	0.980188095361299	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr9-104724531-2	4.8088588170231	0.242885283766498	1.11538447791885	0.217759246766359	0.827616698917999	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11539020246932	1.62141279820923
Merged-chr19-14641933-1	1.86834131896114	0	1.51572434102386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127055573-1	2.26620063213459	0	1.45623438750761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61301498-1	2.40266088971918	0	1.40977083995207	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41366679-1	2.38791166813257	-0.850955710578179	1.11267893514706	-0.764781001687347	0.444401962527567	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	1.08918047352118
Merged-chr11-45627297-1	1.50777961923265	0	1.46718812737406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119087848-1	2.31933624433865	-3.04826751688996	1.26366557538695	-2.41224227063124	0.0158547423460158	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02326711107977	0
Merged-chr2-179937261-1	2.51983882008439	0	1.47668162074848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49355647-1	1.4533281704841	0	1.49193798225636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137865265-1	5.13064252839236	-0.505255986862356	0.595892114140544	-0.847898428041941	0.396494540075705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80085851684469	3.31108889070603
Merged-chr18-32894426-2	2.15833603022863	0	1.53609551251495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95656836-1	3.59538115552403	0	1.4388726916757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6231162-1	3.12235401629283	0	1.43390164792532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-27677338-1	1.33883996590766	0	1.56477643757884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-111328206-1	2.75435892662748	0	1.41473149506841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35706197-1	5.8555255483191	-2.81264019049969	0.832474981702405	-3.37864831054485	0.000728431292798165	0.0282632381479054	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4837335648192	1.34263109599227
Merged-chr8-117338387-2	4.25293655305003	0	1.38025628429641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-61846533-1	3.0372380133946	-1.96180724044065	1.318211835095	-1.48823367247288	0.136689279994622	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.303163067301871
Merged-chr2-156416544-1	3.72234322981841	-0.716949118170862	1.03472831145086	-0.692886345368843	0.488380879425205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62104760959876	1.3626301568499
Merged-chr5-36574328-1	3.41919112123176	0	1.37744194262528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119598236-1	2.16524300107354	0	1.48782688645854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52860080-1	1.49511650749863	0	1.66101879652277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110558020-2	4.35255903058693	0.478601724691412	1.16347134375179	0.411356693279688	0.680811004158243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.0754104773304
Merged-chr13-107953940-1	1.37830184775831	0.603806658767044	1.56537843495995	0.385725678393221	0.699699843209422	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chrX-19080240-1	1.06107980708198	0	2.09440568124709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122258134-1	1.42770364961375	0	1.55709294672471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23899811-1	2.92432200101892	3.20876261327177	1.22334607570289	2.62293939303164	0.00871747784327638	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.56163052678955
Merged-chr16-32598284-1	1.68668381268888	0.949175136428862	1.48184395034082	0.640536499278856	0.521823867935486	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr13-97959329-1	1.02970740135418	0	1.55187225553373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25825903-1	1.8522181437048	0	1.45524480824278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67917282-1	2.46580613023392	0	1.39075734737788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83661764-1	1.68290024885925	-0.510535030340064	1.54908491933715	-0.329572009879563	0.741723374861262	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.730937814817307
Merged-chr7-110552492-1	1.8676050434367	0	1.44866578290403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66894235-1	2.20737889588151	0	1.45002935895131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73948752-1	3.22217661152015	0	1.41635392209334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99150682-1	1.81551163439603	0	1.57890529010717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73793285-2	2.25111235236684	0	1.45388148213773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116477661-1	2.01741979500895	0	1.47638274487372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56339108-1	2.46689320315687	0	1.52857033756831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54064642-2	2.76600490809144	0	1.39727373874157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33965823-2	3.22755751970546	0	1.38999388320868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95966596-1	3.15480347506053	0.706460910650949	0.844887863276687	0.836159378489728	0.403065247440737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30945684676081	2.42345445095442
Merged-chr6-87400123-1	2.33060496034964	0	1.43255832658589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5714223-2	5.69686279280861	-0.403208752701721	0.685710313467068	-0.58801617065234	0.556521438865483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89839702698199	2.82159560044339
Merged-chr16-22615989-2	2.44949293425233	0	1.4411812196035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46924152-1	4.05832997242422	1.462905020998	1.12347781882622	1.30212185455198	0.192874733351234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.62438888480879
Merged-chr10-80163093-1	1.70843132016598	0	1.66571916415694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152885620-1	5.3842510026498	-1.02446187207672	0.809669269597511	-1.26528437047633	0.205769407261219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57210272055944	3.01548355011296
Merged-chr2-52869771-1	2.09691864181552	0	1.50973705852908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7227497-2	3.27046531324512	0	1.39433657188219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-81330747-3	3.34904142157127	0	1.38693019663708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-25798411-3	5.40824180571837	0	1.36113963385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106793726-2	4.45612556973976	0	1.38261530165524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15264619-2	3.05953653888471	0	1.3837201707131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129393758-4	9.88050133833067	1.26891677123146	0.601419803687243	2.10986861997537	0.0348696738407922	0.467226452649582	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65841191292647	3.33275459758735
Merged-chr2-170308114-2	3.54399192720392	0	1.40926973367631	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79107884-4	5.24165723185909	0	1.40782529166996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106329345-2	2.41333243138715	0	1.48449956606453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108244437-3	3.67380759916422	0	1.39564278743455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63737597-2	2.89294765851012	0	1.38376089254795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72858376-3	3.6305275245189	0	1.39865647140312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142393940-1	3.56883856097699	1.82207576844327	1.34477249860578	1.35493235497628	0.175439110045161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr2-126713156-3	3.91847499511538	0	1.36759328850265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84325181-3	4.08965296062486	0	1.3717935253277	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-70038485-4	8.87499924332112	2.14561949105571	0.562366857772297	3.81533773088114	0.000135996801446674	0.00758882182000659	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65423785335698	4.53318266021132
Merged-chr19-21033128-2	6.3092358981632	-0.994222964309542	0.864063669226165	-1.15063623170263	0.2498819207681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99522001049864	2.42443262743125
Merged-chr6-114250488-2	3.31904659359403	0	1.38950310358248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117470519-2	2.36158685268695	0	1.42388639381485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58292922-1	2.82130443321207	-1.39338335601403	1.11445232168266	-1.25028530059521	0.211195346131093	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	0.859510663435501
Merged-chr2-144280178-1	3.17093566177315	0	1.40377119835418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73186295-3	5.38464341359969	0	1.36495922189438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173411168-1	3.95867246241686	-0.228750436103284	0.829126674589259	-0.275893229724643	0.782630074080887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	1.97731223551783
Merged-chr13-107784141-1	1.79679417303649	0	1.48552905919664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126628137-1	1.5683820170103	0	1.4768152195019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103234398-2	2.6022336612591	0	1.46933552281949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-118772976-2	2.49613688493919	0	1.42682883901979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31066712-2	6.947269613106	0.0430704785835952	1.03051297095799	0.0417951833673241	0.966661974775693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67156849457626	3.02875155009864
Merged-chr5-96806103-1	7.4342989671841	0.319484659480413	0.680693233285356	0.469351895770177	0.63881812655125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9490277927014	2.89205704343376
Merged-chr17-47282312-1	3.31087872198363	0.529010268336677	1.08960737461462	0.485505403745804	0.627317880468259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2972429702454	1.80179175376942
Merged-chr13-20038573-2	5.04272871224776	0.0519788475329841	1.0046291937644	0.0517393361208394	0.958736393506927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	1.04567094108452
Merged-chr9-118922112-2	2.41786998701499	0	1.4195302065651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52141648-3	3.91211741744068	0	1.379987092854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76806017-3	3.47834427740718	0	1.37544953089713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63467776-1	2.61032274422544	0	1.42555956857604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40934380-1	2.73218292479609	0	1.4102199373049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104403735-1	2.46679023665663	0	1.45653402276826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88260501-2	4.05209855766704	0	1.43374601963255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33118537-1	1.68020187074436	0	1.43910483935279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89086536-2	3.0962876269885	0	1.41405266707352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134245079-4	18.3429658430424	0.213088067407552	0.418181097822109	0.509559299828032	0.610360243866491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49630143769503	4.5799165159189
Merged-chr4-108870201-6	12.9094916599429	0.215898048640643	0.412638762022828	0.523213203680315	0.600825894050065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08553393766015	4.3350676365403
Merged-chr10-85968276-2	3.83975977320332	0	1.36912199313191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16149269-3	4.67676641491666	0	1.36418544232742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31847896-4	11.2313823071199	-0.132537753201682	0.474121421900784	-0.279543903901936	0.779827449887083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1925728244613	4.05789577062923
Merged-chr8-15043038-2	3.48681519870136	-1.29476481959585	1.3616252338483	-0.95089661046932	0.341656862631842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr8-56530539-2	7.88878302223959	0.0842885677643277	0.682923800964581	0.123423092950159	0.901772071346691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60340856582165	2.45279641610098
Merged-chr16-43930284-2	4.1323519602989	0	1.39617527556171	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45274763-2	4.43415434102371	4.20971944007151	1.20654178954504	3.48907885043823	0.000484688152620596	0.021010497040114	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.59429540968998
Merged-chr8-123357884-1	2.79598203534524	0	1.431787275671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-19967205-3	3.50793879547375	0	1.39581934704884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140153755-1	3.64405440110392	-1.03098296789307	1.13257113697648	-0.910303056676325	0.362662706979129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	0.97908007631626
Merged-chr13-98820737-3	4.46597205903853	0	1.41170518930116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133938660-1	5.11090469385513	0.207835586590443	0.85792138589	0.242254814961671	0.80858272348536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11497644931582	3.55206537867403
Merged-chr1-182494747-1	2.18226899363698	0	1.4340845019842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134060706-2	7.00209230058021	0.249899318735748	0.758710123376553	0.329373908474556	0.741873086566036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	1.43852373395375
Merged-chr16-21198723-1	3.37911522274034	0	1.45660863795872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127111683-4	4.49838790109352	0	1.3904549452039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79388996-2	5.05833997825918	-0.520959274918254	1.24439728369625	-0.418643854132213	0.675476434516314	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.55634759613363
Merged-chr1-63668999-3	3.90754586941377	0	1.37460939111282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58205187-3	4.17959980727973	0	1.3789906711433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97999988-3	3.47848889087423	0	1.38661925203126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64375528-3	3.70124344886943	0	1.37708187673197	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-23812331-2	3.47063233006199	0	1.46144361576189	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135801684-2	3.73723536938474	0	1.37189787749153	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42783125-2	7.17754808372912	-1.1414358616926	0.841896775584384	-1.35579075106956	0.175165754901172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16430127775811	1.28067447403188
Merged-chr11-110611039-2	7.11165100507568	0.502895514410131	0.636497301596322	0.790098423275134	0.429470290625302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88513399620689	3.3371780932299
Merged-chr13-64448168-3	8.3801772085334	-1.02978858816862	0.674153236566766	-1.52752895382211	0.126629533125613	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60081222212817	2.18658129968737
Merged-chr5-118473717-1	2.0046359331292	0	1.4605979714067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51941889-1	2.01411569844278	0	1.40622519818666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110462968-2	3.97911556197497	0	1.45117232873621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51494721-1	1.63282696661072	0	1.54880058686486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132039970-1	2.34476587922559	0	1.43028159451688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45414986-1	1.64722819261896	0	1.67185554690325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109585844-1	2.21525830177692	0	1.4417515942323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7547624-1	2.60697104121346	0	1.54782493220385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61336377-1	2.99036958115002	0	1.39765788878296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88482576-1	2.14486012447704	0	1.42819761704651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104940078-1	1.2832127576327	0	1.60687526172565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83652549-1	2.53701470891989	0	1.45527593552099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117025880-1	2.08143459839438	0	1.47410246482443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148695665-1	3.81268475277762	-0.691756866705347	1.40722684761344	-0.49157452323946	0.623020157385674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr4-145354062-1	3.01115182693791	0	1.4768075514648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30738822-2	2.37013919123677	0	1.42529858047856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45239965-1	3.1361080294619	0	1.38835356672355	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-10418343-1	1.22794754276814	0	1.64273761960345	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-31297843-1	4.91646030201494	-0.280648555262249	0.935216491149978	-0.300089399532672	0.764108964751687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07921614574025	2.43631673959719
Merged-chr4-154825936-2	6.52354833269513	1.31114781252532	0.633043013622979	2.07118281745418	0.0383417147103105	0.494593561921635	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12216108640681	3.3015660085656
Merged-chr16-5474170-1	2.63033027804268	0	1.4803057676498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-44127672-2	7.36682514895103	-0.22622977766689	0.734435503915073	-0.308032191337322	0.758057837337133	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45521893024669	2.78873232942013
Merged-chr4-134120358-2	4.96518229800123	0.415839127617159	0.92523187155775	0.449443150847191	0.65311200913316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	2.06861510361834
Merged-chr8-58555894-1	2.50831831323942	2.08385904643863	1.41690767251748	1.47070912724761	0.141369796792009	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	2.21290282995059
Merged-chrX-72023733-1	2.45736227320868	0	1.441485356189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-91961793-1	3.79304113074986	1.82256675305208	1.12014331944263	1.62708353602373	0.103719357219691	0.932684952705572	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8763281121661	3.27993790168052
Merged-chr17-88345111-1	4.71895491007109	0.204361028403199	0.786972427320529	0.259680036185009	0.795110593303034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24621868818842	2.877421208735
Merged-chr15-103317305-1	1.40057134150942	0	1.6631905601049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11492606-1	2.04593191265063	0	1.44681217292443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68820083-2	1.64167170259839	0	1.64061811242041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63400912-1	2.42033688432806	0	1.44171033431943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3796093-1	5.44097044039285	0.973707214665876	0.872809811661801	1.11560067457533	0.264593103244522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.20225658013615
Merged-chr3-75910435-3	3.98454098601757	0	1.43163748827515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145068555-1	1.37452830498529	0	1.78398862717217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87028929-1	2.25247384077554	0	1.495616592324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148050583-1	2.83429229790945	0	1.40720999434135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118621772-2	4.19027219452163	-0.0404246765912271	1.01067279853695	-0.0399977882552553	0.968094889600192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	0.88866493597531
Merged-chr11-54485192-2	2.93768954582707	0	1.43786729390574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115276142-1	3.69551509588677	-1.81443401825964	1.10917593365741	-1.63583969251542	0.101873142384133	0.922185203473621	C57BL6J_F1_Control-BALBCJ_F1_Control	2.786034639139	1.02674429890598
Merged-chr3-126632206-1	1.441565449358	-4.80950246417273	2.44380286195697	-1.96804027814311	0.0490634034992347	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19067769298368	0
Merged-chr12-52474615-2	3.58565551427093	0	1.39731887214334	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-118529092-1	3.51072530719662	-0.87904252328602	1.01986238719187	-0.861922681261348	0.388730066830695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78660616627993	3.06445527154382
Merged-chr13-101680349-2	3.7749174545122	0	1.41330938961903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40744363-1	2.40525939510701	0	1.44668875342722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-47917740-1	1.79418323737936	0	1.50724827560287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46740793-1	3.31304216648114	-2.7882726950598	1.15178032773454	-2.42083722730715	0.0154848092225138	0.273097211679739	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01628926503709	0.303163067301871
Merged-chr7-80696581-1	3.26329967786449	-1.88565604732176	1.31340730490657	-1.43569785265957	0.151088336539754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr8-40965315-1	1.70202261067105	-0.696057708822811	1.55533064940345	-0.447530375029762	0.654492161400715	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.02748994520012
Merged-chr8-31271213-1	2.71125461112232	0.86032047333987	1.38244919447125	0.622316159451285	0.533733997573962	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95160684218358	2.49309379477652
Merged-chr6-119430735-2	2.98978503335619	0	1.41523183553706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59584868-3	4.02663321018595	0	1.37278547961415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124481727-3	3.704176117184	0	1.36562808473738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34469884-3	3.99390869312018	0	1.38369381302101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72310291-3	3.47067685841482	0	1.41436636828373	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93181989-2	6.38783708433089	-0.183180419900202	0.659639139739375	-0.27769792431143	0.781244254111948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53319909339695	2.64042400306386
Merged-chr13-8744725-3	4.00786146150941	0	1.37076126296194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110287043-4	4.77459110839724	0	1.35990342202677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55858672-3	3.93974718823947	0	1.38543743234249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80326175-2	2.68081387473214	0	1.42905753294131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84708590-2	3.99494195268246	-2.2809851417959	1.16504459655408	-1.95785221316206	0.0502473566184169	0.591083327942117	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66127991928328	0.303163067301871
Merged-chr15-66034093-1	3.19683420306289	0	1.40689759183639	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65404550-3	9.26114485421975	1.50123899250466	0.808518433811713	1.85677769327677	0.0633427885930684	0.689622633561795	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	2.89070142710993
Merged-chr3-84942391-2	3.08907852133869	0	1.42957246963978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75625495-1	1.70799403998718	0	1.51647912272072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56200836-3	3.19315479566975	0	1.38550249555782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130832756-4	8.47624745202815	4.95233258944612	1.0511555104902	4.71132248275676	2.46114424588637e-06	0.000273589652478808	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	4.42513851883008
Merged-chr2-93497407-4	8.37827876327612	0.135596984832195	0.658836506357785	0.20581279805184	0.836937143815944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83342967427503	3.04870320002674
Merged-chr7-35144584-3	8.95907403854966	0.00705725052724236	0.531180177821197	0.0132859824630315	0.989399631576689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04349672251429	4.0106451205361
Merged-chr15-25144410-2	2.74461213711579	0	1.39768652342817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40991138-4	6.33291454724945	0.0412195152368987	0.711981649488628	0.0578940696947794	0.953833006899022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62311798988456	2.68544380860533
Merged-chr10-12699140-2	5.13012716714139	2.72086972796348	1.07755916165156	2.52503048073318	0.0115688254712319	0.222058539474114	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	2.92578411131222
Merged-chr11-117166601-2	3.38925963679633	0	1.43837029535149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-68048956-2	3.01053672651858	0	1.42610441954968	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-109853618-2	3.20785563193312	0	1.373905137782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85293686-1	1.25798648758792	0	1.57358596852293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127570498-2	6.46991535612152	0.755451023961349	0.92173683344413	0.819595134479499	0.412446948268919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45391938817053	1.47418322843784
Merged-chr16-15984995-2	4.29089214038208	0	1.38133193496443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62749681-1	2.20701355437368	0	1.40760961774966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24407478-1	1.598779872673	0	1.60088207974341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100894772-1	4.37819276570287	0.552529924940034	0.947324959836317	0.583252789027645	0.559723139111461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.85314874973115
Merged-chr11-80932546-1	2.33263393612915	0	1.40987741160838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19589473-2	3.50170804259139	0	1.37990112888777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60290544-4	4.257965338528	-1.34409053326107	1.34178921909309	-1.00171510855448	0.316481207523895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr15-88537364-3	3.04937525880131	0	1.39374149529817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115643532-2	4.63815928851719	0	1.36400896815045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102946254-2	3.42849595813963	0	1.38383594651031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124615085-1	2.26966480246935	0	1.40928796081279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110380226-2	6.47678288229836	0	1.36373298314528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6314210-1	1.84030712376066	0	1.447219492998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54317360-2	6.38692532326116	0.17777569389584	0.786684355483062	0.225980970203325	0.821216221091869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34258099779799	1.93681263768315
Merged-chr8-122682644-2	3.24961190886795	0	1.39432043523465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34455897-3	3.8625012425052	0.624506618070162	1.36576031069057	0.457259310569943	0.647484672261258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr3-134339292-1	1.39954390761023	0	1.58879459469757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75782112-1	1.13326631769167	0	1.77403801030855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-37046867-1	1.82830538766493	-0.0271920101777002	1.41961067163607	-0.0191545546402254	0.984717811087341	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.601513806634888
Merged-chr15-5456799-1	1.60509428392565	0	1.51582459514099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40466820-1	2.66917064612788	-2.81291335218901	1.21372185658545	-2.31759306049127	0.0204714477101111	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7666106890699	0.577068348605183
Merged-chr2-147177799-1	6.01921695811251	-0.847749125706655	0.801710581726958	-1.05742539144304	0.29031748828619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35422199170889	1.4277097602107
Merged-chr4-150869943-1	1.92874189553849	0	1.42956848601772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123159671-1	3.11361316927368	3.73419693872458	1.37994909561752	2.70603962898612	0.00680909198526173	0.153138366250245	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.79234254451658
Merged-chr4-119005170-3	4.26641587278191	0	1.37653236467046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155442563-1	3.36440522787786	0	1.47333147723621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77834625-1	1.64580457764896	0	1.46720249634454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84436112-1	3.88732603291685	-4.25073745334431	1.21041462074661	-3.51180279921136	0.000445078120484961	0.0197825033127081	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5421157536329	0
Merged-chr10-128284222-1	2.50112772670904	0.525600788135422	1.31435290028139	0.399893200694346	0.68923518044999	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.723581231604105
Merged-chr3-67062858-1	2.16580870567189	0	1.49740183505468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102066293-1	2.38050672556633	0	1.44044011275895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62854865-1	2.2759599086946	0	1.41314830374645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105186774-1	1.68852733371157	0	1.66509449639364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90260317-1	1.94002934721771	0	1.43330502095127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97879454-2	3.31761616728258	0	1.39144185969101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35617806-1	3.579274658821	0.805100936282805	1.25473665361277	0.641649332523021	0.52110089407443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.78685594785814
Merged-chr7-142538108-1	1.6740548156819	0	1.4702159870856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121391792-1	4.91108725180653	0.105189665830242	0.932628833179302	0.112788348470478	0.910198355969186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37797818469986	3.01274371935604
Merged-chr2-79194017-2	4.13742929718247	0	1.41760834462852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167909987-1	1.8397368175602	0	1.52252063715373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-21856555-1	1.19510823382468	0	1.57496197347434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5291737-2	3.14198781242817	-0.0303976307757129	1.2054539466706	-0.0252167499718008	0.979882076659001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.662147012823607
Merged-chr4-102393922-1	1.24838645606865	2.10860297947979	1.63139612905872	1.29251439421792	0.196179064347598	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.730937814817307
Merged-chr19-12465665-2	9.58887600350317	-1.1192424915711	0.765727565809186	-1.46167193339623	0.143831131915136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15018890295148	2.77997899448092
Merged-chr10-52421735-1	2.04566466299273	0	1.48500429202373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102161424-1	1.89654271255279	0	1.51291843312572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33246098-1	1.4121564736446	0	1.52946221293248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121472619-1	1.38216987231952	0	1.5899404709786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5044584-1	1.50263081140376	0	1.4665713295616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99239623-1	1.75096069393741	0	1.47377421840164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69378137-1	3.97478946094997	-2.2594766125504	1.27985531693376	-1.7654156549223	0.0774939342459014	0.779081333766036	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0
Merged-chr11-19972133-1	2.44468550518414	0	1.40932254379258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27186323-1	1.47984289310012	0	1.53143953838402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95623046-1	1.69341509528932	0	1.51526003981801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117190302-1	2.16300852578973	0	1.50214731332141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37659665-1	5.58275080392792	-0.047192724646053	0.745432875709424	-0.0633091538941584	0.949520326634353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71651275211031	3.40742407678235
Merged-chr11-40688696-2	2.63710076729449	0	1.51556001258384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-63504102-1	2.72160047077077	0	1.50385526027399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38944650-1	1.94196340929127	0	1.43471720464327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83635365-1	1.92313403589862	0	1.58589370703455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129432677-1	1.38142738747982	0	1.54675127582314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26657475-1	1.77095576762617	0	1.51197247992986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130827527-1	2.15144870370715	0	1.67839559594499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87675868-1	1.47098076987171	0	1.54080222423213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77741588-1	2.78755542373488	0	1.43679916894932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108868087-4	11.9000424526984	0.401256287165023	0.543387874972486	0.738434377442339	0.460250530674876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49559273336076	4.15120858889458
Merged-chr18-53845607-3	3.03040049820908	1.83285685296456	1.34314814840302	1.36459768428658	0.172379533011584	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr8-106528202-2	3.06983623105288	0	1.51150938169279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46392284-2	3.53911726555667	0	1.39419982359234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114523477-2	3.3697940152503	0	1.39314216539559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96902934-3	3.50272257264559	0	1.40231518137789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53064308-3	4.40417731225511	0	1.40053889609955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84515763-2	3.94299711593616	0	1.40651673005687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24305460-3	3.99921752420474	0	1.38141233445554	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121059702-2	5.13818474583196	0	1.37926706281411	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25516944-1	2.24814138731787	0	1.4156971068264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8459375-1	3.12913222364378	0	1.39127918123778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100048607-1	3.51783097994064	-3.96789024617145	1.20344197426276	-3.29711804227389	0.000976824376133759	0.0352350340160949	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39401765632919	0
Merged-chr19-44487460-2	3.06884286243245	1.96575764670144	1.25302741909902	1.56880656938449	0.116693017216228	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.80109304687756
Merged-chr1-173398772-4	10.1149665122682	0.11764339211704	0.520163680850896	0.226166102032723	0.821072234211514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63248838935967	3.81162989319786
Merged-chr2-120037981-2	2.38534970288598	0	1.45507580028807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31079412-2	8.04570294388211	2.08868668206372	0.928381801092706	2.24981433242803	0.0244607338203704	0.369042750413964	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	2.37618163600509
Merged-chr12-105807692-2	6.65575162695703	-1.55210325132689	0.764586150304234	-2.02999132368445	0.0423574212215247	0.526856694307373	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74427526168983	1.88373020672615
Merged-chr7-43922611-1	4.87870769945049	-0.548327979671672	0.887260679520428	-0.618000991510238	0.536574685029197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1506673546956	1.43926704001285
Merged-chr3-90628256-2	10.151977784145	0.867524573156886	0.663237088775008	1.30801577269931	0.190867959551489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4525440695086	4.31440314411262
Merged-chr2-38072223-2	2.61555439184753	0	1.42004006754788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-66838607-1	2.04940067061642	0	1.55309521423323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17623146-1	2.04219804086358	0	1.46178610639667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144665846-1	6.13470966234698	-1.50774095195437	0.851975242023192	-1.76970042976122	0.0767770582772212	0.775027690044841	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22449065982335	1.4965005622044
Merged-chr7-97387968-2	5.82999624387486	1.05210372837676	0.771326777048847	1.36401815635415	0.172561851386442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	2.55533259242382
Merged-chr19-4301919-3	3.23598129420716	0	1.42508377620572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10277998-2	2.54105506464246	0	1.4394571887733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47598015-2	7.50304234173351	0.501194541736135	0.656451293124436	0.76349082861983	0.445170729901655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72315056385711	3.45214347177347
Merged-chr1-170987155-2	2.73207045989107	0	1.56299421495972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90062065-2	7.04042034750725	-0.432363672554709	0.763209528440348	-0.566507173250657	0.571049058018659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7767501314117	1.66329052562322
Merged-chr6-127420008-3	6.10487383870342	-0.035535474286775	0.685561193285238	-0.0518341391473569	0.958660852998493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	2.1304360554358
Merged-chr2-126599169-2	8.52165648610867	0.029916387309729	0.636939262661092	0.0469689797183176	0.962537950830051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60524550487833	2.63768218765454
Merged-chr6-113226924-2	3.54886767623823	0	1.37599490973062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73117128-2	3.02159002965223	0	1.40623244946495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151307259-2	3.01688592399725	0	1.43861588954691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120678623-3	3.38804882516809	0	1.40171353713913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110182027-1	3.99146600139659	-2.1119443176051	0.925181353238203	-2.28273549851944	0.0224459534231632	0.348676332075074	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13595722895852	0.730937814817307
Merged-chr2-59688897-1	3.71402046485622	0	1.39623079677855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84782742-1	2.65220362288199	-3.82264628001558	1.17959911509533	-3.24063169520659	0.00119265167486896	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56035012356975	0
Merged-chr7-39523578-3	6.90562843515992	0.868969320401217	0.830759861548342	1.04599338584036	0.29556408612948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12318498838608	3.85679921103781
Merged-chr9-106411350-3	9.91886506409982	-0.100958421892575	0.673170543698012	-0.149974509190445	0.880784726492956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14715751818681	3.40620216478822
Merged-chr13-44483610-2	3.19484627517111	0	1.38736057368142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55734124-3	3.47870881529823	0	1.38400746076897	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120869041-2	4.24199707066749	0	1.37901960861572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-145185349-2	3.31888579027287	0	1.42411329791358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46371937-4	4.32210147171457	0	1.39494680810637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138856624-4	10.6096338256524	0.0811129532259598	0.656331541463214	0.123585334700094	0.901643604674889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00143883346923	3.4057474984673
Merged-chr6-5163849-1	2.50486573254272	0.616051336193038	1.45246632362881	0.424141562644916	0.671462575705198	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr10-117676535-1	2.03423324775079	0	1.46379541194141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105556963-3	3.73646841331749	-0.973407185934122	1.23355763262775	-0.789105559551804	0.430050312835797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0.601513806634888
Merged-chr17-26518557-1	1.83234638218108	0	1.41520619895102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41910904-1	1.81902448069618	0	1.55112723785095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111061819-3	3.13758345668137	0	1.40287296891467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132983841-1	3.85836826898009	1.40947927706234	1.20174761337476	1.17285797897633	0.240852763032143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	1.25115482808927
Merged-chr6-38954873-1	2.06927971352267	0	1.46700534128148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4487637-1	2.38821595695571	0	1.40777033079977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61526908-1	1.21721382274309	0	1.67623137218592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43286994-1	2.65045762266188	2.10311135839679	1.30379210955163	1.61307262330345	0.106728730816517	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.19182800327718
Merged-chr18-53135584-1	4.17402856993106	0.377701379586564	0.883066561560351	0.427715640052294	0.668858161699914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01927470790114	2.35163392625407
Merged-chr3-94566241-1	2.37171185288054	0.617805131866358	1.43512443939419	0.430488893441988	0.666840044195966	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr9-47730507-1	4.1955000548694	0.171016039269159	0.792243953367751	0.21586285201949	0.829094654206877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09296523225154	2.20225658013615
Merged-chr5-100643464-3	7.46816308038586	0.643730400351842	0.713941288190896	0.901657336533981	0.367238922944424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12695852494485	2.52066817208332
Merged-chr3-9036869-1	4.10519204832572	1.70176313069953	1.02881311894449	1.65410325681446	0.0981065344916563	0.900379045568068	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	3.14310665760822
Merged-chr17-81545417-2	2.04941019443261	0	1.50049978996069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5755245-1	1.80065685815969	0	1.51921001541787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123323613-1	2.17062030632674	0	1.48427815048035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115250430-1	3.27309009707968	-0.357031653560977	0.914775084111911	-0.390294466653071	0.696318814486459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	1.80610776840488
Merged-chr13-70847165-1	0.796774980082187	0	2.00713656290459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32509209-1	7.11773259800261	0	1.37226873910656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120598932-1	3.50310689818472	0	1.38678237864705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78424785-1	2.16628189568738	0	1.41649051663663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62686918-2	7.4919290237798	-0.228384371951188	0.679725067264956	-0.335995217699047	0.736874472776082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63486423736552	2.96060880866902
Merged-chr8-125850016-1	1.26013611044021	0	1.56082783047055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70637834-1	2.34450977202986	1.69778876154167	1.55821501957838	1.08957283828586	0.275901353260714	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.24668184253909
Merged-chr1-180987948-3	3.01193646535696	0	1.38600876275719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157634572-1	2.08242902531256	0	1.47698426204366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9903171-3	3.80325550660737	-1.74594394447395	1.32536018825044	-1.31733543828468	0.187726211377424	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr14-66153916-1	1.24822476928531	1.15861836812443	1.53915380370636	0.752763216602802	0.451592214243978	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr13-107856816-1	1.87218804190655	0	1.48165127355423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96409818-2	5.99331865113387	-0.839164090108639	0.778398507318217	-1.07806487579193	0.281004805090979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57078032519388	2.12715467086479
Merged-chr6-32780874-1	2.69359957570321	1.3347081759464	1.33396505351231	1.00055707788757	0.317040989874946	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.52554022439958
Merged-chr3-144232601-1	1.90856586378436	0	1.48956650656018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62554971-1	1.20593710170459	0	1.56548133674503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129502477-1	6.91925448647565	0.535941094175056	0.715116378863387	0.749445978327173	0.453588447397436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95715003738506	3.8689587062433
Merged-chr3-58978470-1	1.71120511474378	0	1.49116376556744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119249388-1	3.73800569429943	1.75292880972679	0.985131891943987	1.77938489664332	0.075176680898455	0.764940254682005	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	2.6969687485624
Merged-chr4-155216834-2	6.43352713035303	3.12558674074705	1.11631887553258	2.79990494584791	0.00511176565420019	0.125420113288812	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.84899591177394
Merged-chr1-39615597-1	2.04769673776451	0	1.44835499783773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-118477143-1	2.74424006383432	0	1.41995288819188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155532942-1	2.40140391202131	0	1.41452305810581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80353990-1	2.60690123147635	-0.709528006150971	1.1276713977966	-0.629197483892333	0.529219775895164	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81960882153758	1.46573328458049
Merged-chr9-57935895-1	1.89367261275296	0	1.50736323996971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13311264-1	2.83029831027999	-1.19719481893835	1.31367636250136	-0.911331628635516	0.362120666222237	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0.790093605168944
Merged-chr2-27704159-1	1.44203034221225	0	1.49104158108958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71142932-1	4.47374435750315	-0.748939977644939	0.964420375055748	-0.776570048721386	0.437412478090687	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	1.02674429890598
Merged-chr15-81948769-2	4.30313931978761	1.68309904531357	1.04372175199744	1.61259362669457	0.106832824035695	0.94984060872691	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	2.18239592917124
Merged-chr3-115704402-5	10.7968331007074	0.512953450983682	0.528675387529937	0.970261644636588	0.331916090519781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07370578505094	3.46188695403172
Merged-chr9-47711119-2	8.53008203322652	-0.432861100508493	0.561886599999417	-0.770370926284667	0.44107989452799	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56779666681302	2.57026951868847
Merged-chrX-96019753-4	4.61210314203675	0	1.36485281844243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85050580-3	3.68365428099274	0	1.4068855949264	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67021130-2	3.58523162323592	0	1.39244185139487	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21174213-3	4.29726389928723	0	1.36550382162297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37515263-2	8.04829905692299	4.70376548528863	1.0553192303082	4.45719678955808	8.3038368155485e-06	0.00076119437682361	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	4.19081336221739
Merged-chrX-103521440-2	3.35373471830719	0	1.3902135987963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136690722-1	9.26324408045686	0.333720493812938	0.791646195742539	0.421552576905796	0.67335162708627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14280852917652	2.25285891757623
Merged-chr5-149242625-2	3.43297830901294	0	1.38606671432618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-141012150-1	3.03970618528385	0	1.44306778702831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67102314-2	4.6257998433815	0	1.37741611866824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47015328-1	7.54304974468213	1.10941794854651	0.612605887860288	1.81098153075461	0.0701437106685581	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	3.7868254557504
Merged-chr7-102193949-1	3.10722516910223	-1.19228335367037	1.31992998347778	-0.903292878103215	0.366370475361315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.376242425970964
Merged-chr5-32726357-1	1.68371632923341	0	1.62508972425046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125490102-1	5.61480440713321	2.60654381092086	1.21108274067551	2.15224255401988	0.0313782556673897	0.436349603434034	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.25298535761957
Merged-chr14-13917844-3	3.56054994950236	0	1.3824125120344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103865823-1	7.0710993625337	-0.0410333586502148	0.976026169819065	-0.0420412483999497	0.966465815700597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5105912313833	1.48939074597659
Merged-chr19-36909841-1	2.74882112877923	0	1.40325623098047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34766517-2	5.36498882420385	0.441571111888422	0.966857109463206	0.456707726060555	0.647881136851708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.97656658922368
Merged-chr10-44371985-2	3.41357961367462	0	1.39154417480591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5730046-1	6.00543547849164	0	1.41935625489842	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129687266-1	4.84754145220443	0.265743539573428	1.12672078988921	0.235855716836075	0.813544631718427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.662147012823607
Merged-chr2-22758691-2	5.00321078967145	0	1.37910898712331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104758613-3	4.30620135334583	0	1.37382082597533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128672481-2	1.76048344522443	0	1.67615626219215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9780367-2	2.7690575411758	0	1.48025934924986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73574157-2	3.47125291578879	0	1.37486592602245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85410855-2	3.03963019712664	0	1.41684068938985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62464687-2	4.60008624777616	3.36326776306972	1.20549659758206	2.78994380391919	0.00527171907828812	0.128217171085756	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.67285245412069
Merged-chr6-38943205-2	2.79197028734392	0	1.41811822034958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30867244-2	3.60834364514878	0	1.37381184457514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77531234-2	3.38474806568529	0	1.3833917375829	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5097250-2	2.36371663139781	0	1.43506649927201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49192748-2	3.89210089790628	0	1.37699869503158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36931847-2	3.41955947868991	0.461701760900848	1.07303716376423	0.430275647938595	0.666995139267933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.30064958020929
Merged-chr16-49902953-2	3.12768569649603	0	1.56425045054164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135296872-1	5.25484477203698	-0.383319871905705	0.932070184641151	-0.411256446372957	0.680884502166696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41152608579808	1.6630069827152
Merged-chr5-151344980-2	3.22715838803776	0	1.50810992898709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25764887-1	1.91063477778482	0	1.58281690513681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94891649-1	2.28714891164867	0	1.41984772389681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103146297-1	1.67969786366366	-0.688576183518516	1.43610923238979	-0.479473404939173	0.631601883689277	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr5-24652249-3	4.77360673031551	0	1.37153190623641	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67564867-3	5.5595800214894	0.889157164271111	1.17329436025954	0.757829573198002	0.448553015818266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	0.815004392037195
Merged-chr18-53144945-3	6.41438022732833	1.77886091844275	0.880864035965375	2.01945004655937	0.0434404643349061	0.5355818101114	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.31355060773611
Merged-chr12-25213586-4	16.0185334584194	-0.319347812409819	0.368066893805183	-0.867635252680046	0.385594041336589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.77907326541154	4.43333930066714
Merged-chr11-119485094-2	7.36859455917442	-0.403437206043483	0.786162698572695	-0.513172663592329	0.607830546212789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48372707563089	2.65013310996875
Merged-chr9-120591652-2	2.71470931662828	0	1.38359372508405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3122988-1	3.53896507136584	0	1.3957035036774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33625700-1	3.30210456470517	0	1.37907818912401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78249765-1	2.69108779410844	0	1.43515180602192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16294524-3	8.20483461250146	-1.70575052413561	0.707726665172794	-2.41018264264374	0.0159445362779219	0.277175902632413	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7635850447605	1.34263109599227
Merged-chr9-23597491-2	2.61125603320423	0	1.39237920819791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55476997-2	2.5993932600838	0	1.43410573325678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130411959-2	3.37011818221875	0	1.40349736637163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-144265854-4	3.90526604299875	0	1.41662901631182	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43335767-2	3.91192998081062	0	1.39134815475199	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84026368-2	2.80214633998259	0	1.40416864242549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15999480-2	4.99315339909742	0.165201816087547	0.787425248251457	0.209799998735615	0.833823774050054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55091902091157	2.61879195879859
Merged-chr6-147116755-4	9.14932376690349	0.264574586885508	0.500495904498796	0.528624878859813	0.597065698231089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30457403055127	3.6196589487311
Merged-chr12-84589899-3	4.37028395477105	0	1.37157103855006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90535332-3	12.9391432412925	-0.0665919190510176	0.491275439659783	-0.135549049830648	0.892177785913837	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03195119006635	3.8786320907386
Merged-chr2-128419182-3	7.30570758467994	-0.127364964983775	0.969522775797376	-0.131368718882364	0.895483632894276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	1.71450075940727
Merged-chr8-128060026-3	9.58582928729366	1.37974953389601	0.588971002458186	2.34264425266669	0.0191476304787399	0.311257788634517	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97400306278741	4.32145118407508
Merged-chr19-57031520-1	2.49673613662716	-4.40398876735823	1.49985688158012	-2.93627266804188	0.00332182196346507	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21050514855816	0.376242425970964
Merged-chr15-67092469-2	3.43315416624185	2.91361418291297	1.23149504330078	2.36591628911766	0.0179855105726399	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.71465869101023
Merged-chr8-122020262-1	4.81340674158539	4.44164188696676	1.08059626147899	4.11036207074008	3.95039194758175e-05	0.00273205287377349	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.287679410432
Merged-chr8-14072678-1	3.08615157070196	0.747357070800902	1.05946711883786	0.705408461964053	0.480556079480172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.95720824132453
Merged-chr3-9696771-3	4.29251491635478	0	1.38602536054482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25964077-1	2.03460115849791	0	1.47132509691959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127630099-1	2.23568854322561	0	1.45344553757396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43481001-1	1.3532806768631	0	1.66107413923605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40155043-1	2.08074963583458	0	1.50736368731118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12381603-1	2.24761560652457	0	1.50343584110682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80755673-1	1.12258242763482	-0.661910399857892	1.64855830333591	-0.401508638498556	0.688045679381853	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr4-72231038-1	1.91885347204288	0	1.49985148493062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120085846-1	4.31164710076135	-0.332405941619334	1.00643846817667	-0.330279447904592	0.741188820642273	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	1.79061031525623
Merged-chr6-129067169-1	1.83445861832202	0	1.48130714536995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136698645-1	2.95719112943063	-2.37189051604774	1.25733561833832	-1.88644183895976	0.0592354389991801	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22587140279999	0.88866493597531
Merged-chr12-85666738-1	1.99028118373981	0	1.46135143335576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27704417-1	1.97335371822402	0	1.47827796427063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121635761-1	1.87325714494979	0	1.53912679471581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75399332-1	1.58859593211212	0	1.51128669844072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126683690-1	3.61614686728289	-3.00312426667254	1.11984966632572	-2.68172091038428	0.00732445369972429	0.161455790212211	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47188117561962	0.376242425970964
Merged-chr1-37457782-1	1.25752255755568	0	1.59207426907896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44275506-1	2.0232897670571	0	1.48167747826396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-69522286-1	2.03510872813583	0	1.52241492008545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35810905-1	4.56619497742206	-1.3281729266796	1.04252411435967	-1.27399731899283	0.202664366321927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94287088021325	0.953310774576147
Merged-chr18-57597761-1	2.05277414847729	0	1.45524869351926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34827939-1	2.28904896956195	1.85149069783114	1.48919461781913	1.24328323220949	0.213763480902871	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr3-107113400-1	1.55144459353725	0	1.48286232182894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74247225-1	1.63269113715217	0	1.43069629715561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79843291-1	2.86971488599393	0	1.3852792160999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83528445-1	1.28324182378254	0	1.66631224415375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16210661-1	2.06396678069141	0	1.45861411254535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135705712-1	1.24983629150771	0	1.74842750549652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111551971-1	1.75238140960126	0	1.51489762804907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156003803-1	4.68919586955196	0.588340957443868	0.895583106037686	0.656936194393903	0.511221944110045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61691174577224	1.91446761460145
Merged-chr12-72361052-1	2.92897909132867	0	1.42961257642023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67012716-1	1.89334421267122	0	1.43338053919743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93919687-1	2.13718459260751	1.16334753190043	1.17927370462755	0.986494931020155	0.323890301456727	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	1.49169296430729
Merged-chr16-70414881-2	5.5095692332406	0.90362627970109	1.03040195049964	0.876964838103153	0.380505736817562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.70133746420996
Merged-chr8-23014504-1	2.3458901185674	1.62504631270931	1.36621303040327	1.18945309153554	0.234261419448626	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	2.95341443664682
Merged-chr4-129832598-1	1.58871234951298	0	1.49979975331797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29820374-1	2.7709824696086	0	1.4178984836088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-33225297-1	2.03256631469381	-0.870342201211238	1.44440345646419	-0.602561699306495	0.546800306257571	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	0.730937814817307
Merged-chr5-44063924-1	2.66622789536732	1.32585050694039	1.438846492614	0.921467657423046	0.356806319501937	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62128842389662	2.86926521898396
Merged-chr8-128436317-1	2.45654901818005	0.617100628501325	1.44212903674214	0.427909439987004	0.668717054028793	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr1-173487047-1	4.17917826724311	0.460658020269146	1.42575325056497	0.323097997557856	0.746621026723174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.815004392037195
Merged-chr11-118423451-3	4.52087350907971	0	1.37928591120167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144679759-1	5.07744579300112	0	1.36567253321123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105676609-1	2.37073660310236	0	1.47568631433883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3776506-2	3.81548844322332	0	1.3646068887129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150894746-2	3.16436323102745	0	1.45561114644853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128769579-3	10.2254292505449	0.0161525734617776	0.519035700648294	0.0311203515318936	0.975173559353756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.09876068799569	4.31310487708309
Merged-chr11-23974253-2	2.72739680150987	0	1.46707608878231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65726034-2	5.31433946965373	0.73698222002389	0.999156032469123	0.737604734470404	0.46075467755567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.39284430389808
Merged-chr10-93178000-2	4.68083303887627	1.27428686210279	1.35818104159349	0.938230488483133	0.348125973312313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr11-107676804-2	3.71236528388153	0	1.39673457210046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71812877-4	11.6739336870756	0.353065504764489	0.542169989836956	0.651208129152749	0.51491214348654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32386601991198	3.75479251786805
Merged-chr5-73401716-1	5.47061547306552	-1.09110041327485	1.07663824081769	-1.01343271296604	0.310853520635944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71989966306259	0.577068348605183
Merged-chr5-66169287-3	6.92085074923462	-0.944407078048265	0.850225699457256	-1.1107722086631	0.266666411771434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98733255708278	0.88866493597531
Merged-chr8-64417150-2	2.56252405831937	0	1.47970164486301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72535352-2	3.38521502858946	0	1.3820925501103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102760527-4	6.21398657980347	0	1.40399371731736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134526371-6	10.7110268383746	0.648612026519855	0.575982584209883	1.12609659441284	0.260124635390869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32661066584029	3.56744614541471
Merged-chr11-106289629-1	1.92990017390881	0	1.49742909150927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25279345-1	3.32430908244073	0	1.38424021591404	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80063684-1	2.23849477519992	0	1.50059150322826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40637616-2	3.07813931945028	0	1.40142231515101	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99387065-1	2.31081446758809	0	1.42287509945588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64388897-2	3.30232588414861	0	1.38915435787939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65965440-1	3.19835756276485	0	1.38688058996147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-41837841-1	1.72491137160184	0	1.48287385901744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80815656-4	3.76559664666315	0	1.4061430274253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36904923-1	1.95290477900477	0.62263303903148	1.41356170979596	0.440471070146173	0.659595960825906	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.55634759613363
Merged-chr10-120365755-2	4.09745616233236	1.33493890919745	1.2086157478378	1.10451887755529	0.269368119300922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.23107802440432
Merged-chr7-81727970-1	4.56609676863991	2.48069360305612	1.20117179683166	2.0652279795442	0.038901434323104	0.498620452159046	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.41478649953382
Merged-chr5-120130372-2	2.9331161700061	0	1.40292043358192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136688158-3	4.21023814485413	0	1.37388563516958	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139609186-4	7.72668018220715	3.07829231098489	1.06752140685042	2.88358836762532	0.00393172317545429	0.10383144877838	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.61177357084289
Merged-chr6-53216849-2	2.53725668266738	0	1.42794309699264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111429171-2	4.37342800553584	-0.847762217274338	0.996857584506677	-0.850434636251353	0.395083486266505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	1.32514197764128
Merged-chr12-87330477-2	3.00206034306245	0	1.43437766294769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-3284249-1	2.63150939773189	1.26711298976706	1.39609222785244	0.907614099189002	0.36408214255968	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr5-90500961-1	7.85301464256403	0.0441565182354092	0.54871610165172	0.0804724302831488	0.935861522552933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31048433186102	2.80362177832923
Merged-chr10-59252143-3	3.68446873516917	0	1.38577105516503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27754287-3	7.27209929734877	-2.97572541798775	0.945775164550745	-3.14633491079379	0.00165330568348373	0.0534316549634318	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60437795295367	0.97019877533161
Merged-chr15-19332480-1	6.07224849903255	-0.0430089308762335	1.31313098695515	-0.032752963187596	0.973871588006632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12566187312478	3.37801220854048
Merged-chr13-112100827-1	2.56616026226775	0	1.51259007407885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-71867293-2	6.21961601331957	0.46354334132217	0.687102604032714	0.674634819605633	0.499907805191391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26276386882201	3.0037596952608
Merged-chr3-9853270-2	8.79942089994276	2.14872133364661	0.666726857168714	3.22279102835492	0.00126948131543182	0.0434284045472364	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	4.40094786870185
Merged-chr11-95047177-4	4.78359713311569	0	1.37240939110652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20719378-3	3.93149626344679	0	1.40468066729939	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11240677-2	9.18364555779418	-0.06759981469696	0.686252921463634	-0.0985056858523585	0.921530757262572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56757889007095	1.96811477193014
Merged-chr10-91180137-3	7.55358060445512	0	1.35378866501961	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64377922-3	4.16633623701057	0	1.37151933102568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-5459646-1	3.75153223908577	0.448633027771616	1.26580512258235	0.354425037288809	0.723020373739564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr2-72881713-1	1.51244587653976	0	1.67219300434988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48894335-1	2.32910374564378	0	1.46289671622648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91680927-2	8.79463369623654	0.497521242331928	0.67173911998497	0.740646521142105	0.458907793011499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30670691456252	2.2358870118525
Merged-chr9-65831428-2	2.233090570233	0	1.4653094529033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32801563-1	2.16823948592708	0	1.45171342272888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141976292-1	2.55913057916123	0	1.39516311525554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83123125-1	1.98848838794981	0	1.46283228336073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59852868-1	1.60080827766975	-1.87139553528937	1.55610511244558	-1.20261511919865	0.229125294182443	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50954942419772	0.465515277017237
Merged-chr11-119477308-1	3.44417275593584	-2.10911743260708	1.28222186303286	-1.64489273924745	0.0999919325161283	0.911235165427654	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr5-142795159-1	2.05561470424067	0	1.50466440400586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75617094-1	2.98855497954244	-0.940380277979151	1.39415428320932	-0.674516650922172	0.499982903314026	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96334085054552	1.44075340970692
Merged-chr4-11235702-4	9.95471697461668	0.339317219648857	0.566761145879313	0.598695274218943	0.549376109153498	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83707195948824	4.1547007077583
Merged-chr5-114929039-1	4.96299137098128	-1.00362716322325	1.06847052441751	-0.939311979401955	0.347570589862776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97058611410777	1.25243428981845
Merged-chr9-66280633-1	1.9636113120977	1.90640968555713	1.50557829336794	1.26623085226112	0.205430444846528	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr13-102025673-1	2.9380263385799	0	1.39614177115339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21357521-1	3.07244048364332	0	1.41034162512989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41187478-1	2.29697534770426	0	1.51225027342396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149794603-1	3.64227260652726	0.285449106582072	1.05209690145456	0.271314463703322	0.786149183110204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84007006085556	3.66194353920041
Merged-chr14-51252330-1	1.82444992942415	0	1.60103310997133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178146693-1	1.33469829595401	0	1.69553548384943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100028313-1	1.46457967072675	0	1.45203388836525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-141132587-1	0.956995858964266	0	2.02632615770014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25044982-1	5.69066802216367	-0.635898594154803	0.755868436970114	-0.841282110817846	0.400189910011982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57485958356969	2.44108009025084
Merged-chr3-49496260-1	4.18152909023318	-0.945512854091986	1.60382295909827	-0.589536924090168	0.555501150225276	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12758358736382	1.66248286942987
Merged-chr6-31211292-1	2.11109241979497	0	1.47088138452043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38632253-2	2.8672960308471	0	1.38977359067961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107763342-1	1.32450588725313	0	1.54298417367625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64263199-1	3.08962283475258	0	1.41544211753552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105483534-1	2.44255373269463	0	1.39814585800083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24448950-1	2.12394822238137	-0.621267448113131	1.21966479803487	-0.509375567052622	0.610488999012517	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.02186287315087
Merged-chr12-24674509-1	5.25743155009911	-1.20152837669304	1.10780176535156	-1.08460594148966	0.278096222387468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07451950572158	2.74652560765538
Merged-chr11-11724628-1	1.53485493008818	0	1.6261260798529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44481593-1	1.70597885328976	0	1.54182287657919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24712655-1	1.19780642466993	0	1.74243355231256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-32934757-1	2.55619512235736	0	1.44097451374209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111678289-2	3.08491069600897	0	1.38191435486327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29045172-1	4.82241341388558	0	1.37985332407988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48827575-1	2.47576343561322	0	1.44190081650662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24653870-1	2.29539947517811	0	1.44278513732828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129231709-1	2.81058924141493	0	1.38865840311724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75830383-1	2.18110051418243	0	1.43834419222378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41778868-1	1.96417168167672	0	1.46711835787293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93988688-1	1.10050783960835	0	1.70262112894546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130900061-1	2.36391847360326	0	1.43918498450573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34876845-1	3.69105749940155	0.883256803714548	0.970668494777024	0.909946916446942	0.362850505456104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38450684154311	1.56203317187393
Merged-chr15-81528326-1	3.09437569369966	1.12681433576664	1.45835984373595	0.772658641559977	0.439724429416224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	2.18536087050143
Merged-chr12-70139986-2	7.41824828901045	-0.0429412407777333	0.806059792166361	-0.0532730216729018	0.957514375255278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09872908654163	2.07322924255145
Merged-chr12-24534361-3	7.81514589135442	0.0143059010362203	1.16746684693405	0.0122537963915547	0.990223129723752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.859510663435501
Merged-chr3-148220750-3	10.4068276237313	-0.655048578780755	0.590932658327396	-1.10849953806045	0.267646138522469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21296297314976	3.56759354046543
Merged-chr2-153118372-3	3.73622579160982	0	1.37340970791757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124013988-2	3.60101455103334	0	1.4177610653524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11970174-2	5.13118622757331	1.02855524491317	0.893982353133424	1.15053193310591	0.249924849643674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	2.04904117966361
Merged-chr3-68717498-1	2.90824721383121	0	1.41214635092795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150404000-3	2.77602248591213	0	1.46159811045881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82321304-1	3.80630490914065	0.408274751992205	0.872233536988231	0.468079630831386	0.639727645078692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	1.68020903733389
Merged-chr1-133120152-2	5.97482718913763	2.46993448275826	1.247158166629	1.98045007349338	0.0476529781261292	0.571320740617172	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.28067447403188
Merged-chr4-109987827-1	2.37168926350417	0	1.40519948364018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139297824-1	8.04955349387351	0.303350223831828	0.781043819852236	0.388390786946139	0.697726861123088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.708310591257	4.06311636532959
Merged-chr14-26565071-2	2.80291534510316	0	1.49281871933368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4447485-2	3.97126920394475	0	1.37200903706665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170116894-1	3.03741757722929	-2.5886907866739	1.2858154235877	-2.01326779815014	0.0440864641271417	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0
Merged-chr14-51904901-1	3.80502119238421	-0.409428160483633	0.958900644656558	-0.426976624497187	0.66939635362787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60978507060531	1.61412912633251
Merged-chr12-103368016-1	3.83722277583692	0	1.37012562945957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24621788-2	5.38918440689449	-0.863385185581735	0.725464154152	-1.19011419191476	0.234001512991544	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65197290288771	2.02714580380678
Merged-chr1-148993793-2	2.96742841364111	0	1.40292758589491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41973468-3	3.90557501927582	0	1.36958955999878	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82984680-2	9.1613830277051	0.391274771499026	0.623810590060401	0.627233294422175	0.530506321678094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09282950292299	3.44582176441069
Merged-chr11-114679343-1	3.05092037243761	0	1.39538402821315	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122406750-1	2.78649933009965	0	1.39883742724961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97746071-3	5.90239799123136	0	1.37366112967369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57549065-2	12.0599411458802	0.575967532210527	0.600824129285437	0.958629163072274	0.337745595600414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69360857578346	3.85018681150053
Merged-chr4-132573929-3	5.38820201368045	0	1.36984128733128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89696481-1	2.8568915716777	-2.54204895028918	1.36323891741138	-1.86471272043511	0.0622216827909101	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19454903376793	0
Merged-chr12-5410577-6	15.1709891696219	0.200197617758636	0.430486263241044	0.465049955953038	0.641895682421185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49462198597256	4.66820439010932
Merged-chr19-10318003-2	2.6383718453892	0	1.43909709173566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46802599-1	3.59456182186628	0	1.38088780950163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84270291-2	2.594203494966	0	1.40942094772139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83790156-4	6.55903499050663	0	1.35702243827985	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20794802-2	3.1597708595812	0	1.39944506252365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75964239-2	3.48652455522744	0	1.40960404421027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20640128-2	2.81564363630885	0	1.4656635028065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49751363-2	3.24117382071565	0	1.38584881125464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50593750-1	3.20396345950717	0	1.38875405523027	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88823264-3	8.90452339976747	-0.716854552793911	0.739384263060951	-0.969529091444589	0.332281272603565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60498618384376	2.04229173714305
Merged-chr10-37280055-3	3.93946461409612	0	1.36764273608584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56168045-3	3.7377356460287	0	1.36823008814542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141015465-2	2.9804709150446	0	1.47467392729643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107511049-2	3.93490537329917	0	1.36447614255963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130467644-3	8.69226640991355	1.20259443596915	0.747233487779072	1.60939579881986	0.10752982334094	0.953853405187687	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86688937275899	3.26380912406539
Merged-chr7-112514697-1	5.74603972188253	0.855540473511995	0.797491913383239	1.07278890124728	0.283365841650493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60340856582165	2.68141069278794
Merged-chr1-161500242-1	3.61397767605959	-2.45395575471882	1.34232690073174	-1.82813571968281	0.0675291852927516	0.717035844228735	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	0
Merged-chrX-48277485-1	2.05809200594983	0	1.42208552261576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10771517-1	1.46770119341493	0	1.74026950953256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79610346-1	1.95925447812002	0	1.46716750751967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107105132-1	1.70842367183497	0	1.50592923522728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98831252-3	7.23417107702292	2.06859560290445	1.01697393858944	2.03406943325768	0.0419445953413884	0.524153162795984	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.6518013600863
Merged-chr11-22763255-1	1.96528803563618	0	1.68442566978093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60373086-1	1.5847867697916	0	1.50752476101484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64039016-1	2.22090827182526	0	1.41992501336316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37797767-1	3.30567844167768	1.18209727718284	1.06985996107476	1.10490841810299	0.269199274409927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.45526469271556
Merged-chr6-89257589-2	4.21079947048547	0	1.38869354554059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14620730-1	1.4038358085222	0	1.6243592275399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112416605-2	2.80674283151144	0	1.39707272042907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104931970-1	2.10984148965718	0	1.43270523263636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92733523-1	2.5726874100969	0	1.45401106931149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75029672-1	1.43045902058519	0	1.80440182909498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149053045-1	2.65011445262665	-0.912002815856459	1.20933517974675	-0.754135686392125	0.450767750854953	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.01372795773128	1.02674429890598
Merged-chr1-54910967-1	3.72636185826891	0	1.37555144977768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-72911823-1	2.08613455877957	0	1.4800773812701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55465750-1	3.65050845004916	-1.010178440616	1.07771058827992	-0.937337399856389	0.348585030641478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90807235199705	2.34131617969248
Merged-chr5-99235745-1	1.66945364504587	0	1.63669007858233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100599898-1	4.20234871261907	1.09340674333205	1.07562978000121	1.01652702785043	0.30937848358274	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.716880652154
Merged-chr12-79638106-1	1.72508493784412	0	1.47106164710131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-88948113-1	3.60561503397319	-2.56333996390593	1.06989248802423	-2.3958855610246	0.0165802660439519	0.284856726258907	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04256828795291	0.577068348605183
Merged-chr15-57859488-1	1.72442446810027	0	1.50992630455188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4509408-1	3.09880031735565	0	1.50143519547256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51373156-1	1.54007883932842	0	1.43320534645645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120783225-1	2.93415966414953	-0.418200818331351	1.3325810400134	-0.313827681599871	0.75365191886385	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.600815099743027
Merged-chr3-79169972-1	2.05471373788396	0	1.55537040948915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68473772-1	1.50182532505216	0	1.51091691582516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4297605-1	2.23124245111795	0	1.43893148241847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-15976101-3	4.03924435243165	0	1.37777871295984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54157670-1	2.0164920640145	0	1.50592262860532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22848752-1	2.25052897359733	0	1.43700140027712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64120945-3	7.82027716883421	0.898919640112759	0.631770837677071	1.42285712873034	0.1547775763246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56868975155888	3.79280982733465
Merged-chr7-106811008-1	1.96880661130774	0	1.55478954575206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45063639-1	2.66473482105109	0	1.41659520160731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47087462-1	3.98319617638751	-0.672454091440785	0.785861298893876	-0.855690555556412	0.392168965610423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63777742201255	2.37729643579091
Merged-chr2-150678573-2	3.10634694917102	0	1.40020097603381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34199792-1	2.44087597712315	0	1.41917761501568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-97758114-2	6.4720011714855	0	1.37390389763805	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80777664-1	1.322730196829	0	1.51106671570357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103346273-1	2.4210332449606	0	1.45264713832189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88723578-1	1.6299040999496	0	1.46437479969935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-76835924-1	1.84386720983492	0	1.44874105132392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45820234-1	1.93241940372059	0	1.53973392538227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107241924-1	1.67329543898162	0	1.47772176923786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127550901-1	2.59506367332579	-1.96446003537381	0.862671594315243	-2.27718177846475	0.0227753727893804	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60222811815308	1.338064021838
Merged-chr17-86438122-2	3.50721011845681	-1.42625427294109	1.10916080343924	-1.28588593152464	0.198482874258247	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63412505265868	0.723581231604105
Merged-chr8-95014313-1	1.76203456378146	0	1.48979901374885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9444912-2	3.22409651745858	-3.0638678526453	1.40030425121396	-2.188001536087	0.0286694904268224	0.411524908928344	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22221276223304	0.413263464506793
Merged-chr4-21712403-1	5.14810073915673	-1.82735140088977	1.05316394791237	-1.73510629993748	0.0827219786504783	0.810488592934498	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25495835162666	0.662147012823607
Merged-chr10-120954516-1	2.22597631224445	-0.0354781495627453	1.42856167746466	-0.0248348742111788	0.980186674032422	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr6-140712996-1	3.07410840176743	0	1.40060449751458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106463216-3	3.09084021857783	0	1.3953845111787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46449049-1	1.03575187747276	0	1.56395763993019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98040786-1	4.80728113353745	-0.723349143146558	0.874663275266084	-0.827002989152031	0.408235367243789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26276386882201	1.70266130792036
Merged-chr6-145125577-1	3.93135687414883	1.01162814692626	1.03473586446378	0.977668003660529	0.32823855162701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84725436275124	2.73472690579755
Merged-chr19-25036950-5	11.0600645817993	1.30476951084045	0.61453855188018	2.12316950148776	0.0337396506653057	0.45672204753675	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93838820002239	4.38228495485228
Merged-chr17-72927144-5	8.46936634217523	-0.0308727180772817	0.682494420890448	-0.0452351215369674	0.963919899953345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5421157536329	2.52580821279976
Merged-chr15-99596428-4	10.8485638248374	-0.239427085915217	0.544988319025956	-0.439325170020412	0.660425938804301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50761025920532	3.33580376797328
Merged-chr1-107516071-2	2.48643236911755	0	1.42551213227546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70644259-3	8.6385762794898	0.77372510689679	0.578476096581111	1.33752303936089	0.18105196695179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52908746205369	4.31060686152574
Merged-chr2-173300934-2	3.9824497576833	0	1.37735840885559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115608520-2	5.66847592402363	1.55161797968609	0.901164948961265	1.72179131187312	0.0851073290096938	0.823323155691126	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79795952835561	2.91156459876667
Merged-chr2-70742769-2	2.27775962608341	0	1.4745876692215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27685863-2	3.45566282183157	0	1.37474830747319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25476114-1	3.57446269873569	-1.12336614732017	1.05584916529324	-1.06394566974741	0.287353312445283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58148496924487	0.990919527803163
Merged-chr17-22431863-3	3.39115980783888	0	1.40177676948542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126502149-1	6.10771075736201	-0.558270157925262	0.852890427531582	-0.654562579088847	0.512749423810296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92820688000235	2.97771010202329
Merged-chr13-48572353-3	3.92276169853366	0	1.38085440501635	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38237829-2	3.62823408300698	0	1.39328701087107	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122154755-2	5.74946115542628	0.149588538266617	0.934139684451848	0.16013508552995	0.872774663534719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71664175267955	1.70266130792036
Merged-chr11-106122157-2	2.60366135058368	0	1.39369343302139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24627840-3	3.48021113612741	0	1.41726321733516	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110418953-2	2.82433639471007	0	1.38736612341775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34570506-1	1.68851487733408	0	1.57514378686487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111429159-2	3.61772559538897	0	1.40456896693262	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31162270-1	2.20707953878024	0	1.41254564807059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77368933-1	2.16420429671131	0	1.47578203369524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148279216-1	3.49101317117776	-0.56593471842046	1.10735485680242	-0.511068981134597	0.609302755226632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.815004392037195
Merged-chr5-146904606-3	2.99129368781273	0	1.39392373599654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8844130-1	1.71238860068162	0	1.53377589043882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94990952-2	6.32710938934916	-0.171515566195748	0.703032896943361	-0.243965206950431	0.807257766663821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02193084825737	2.60263190315104
Merged-chrX-151949370-2	2.18481297538695	0	1.57651840304291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62458997-1	1.524943150748	0	1.44291911648416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33303223-1	2.2085447790354	0	1.41452177416222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92893708-4	3.8900039146865	0	1.38838139143272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11456140-2	3.05960170375354	0	1.38156337055227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72945428-1	1.60547600253878	0	1.6255994008609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-119745953-2	2.32986335397167	0	1.5148972600115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44256742-1	3.03962344413792	-0.210763108073251	1.21269438820564	-0.173797380546228	0.862024703086997	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.724326877898254
Merged-chr6-82749855-3	6.73384930094153	0.243700997871371	0.755539165971655	0.322552435197667	0.747034220919847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49081581617818	1.73556682010248
Merged-chr2-75683484-3	10.7790230491792	-0.696231858774963	0.563794734224117	-1.23490308885751	0.216866573742693	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49806240130519	2.38516549817971
Merged-chr3-138482154-2	6.87599708882213	2.16892139115797	0.802553966589666	2.70252404380292	0.00688152071535824	0.154320373170857	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	3.49034828787246
Merged-chr3-57740061-2	4.72817602287187	0	1.4117514684272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23245374-3	5.91819121678911	0	1.38009675829186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84879300-2	5.94828778737305	0.248437736748599	0.74766280057558	0.33228580659268	0.739673456315675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.311378010734	2.50656502262891
Merged-chr5-147899064-2	8.76571707742844	-0.0531609094369815	0.591539631724203	-0.0898687198388206	0.92839153849432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27549233758429	3.89287939792947
Merged-chr10-118086489-1	5.34311767438037	-1.32019818440658	0.778699626328917	-1.69538823413913	0.0900017964388792	0.851297660104582	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14722338365679	1.4068548238317
Merged-chr2-170195720-1	2.17184684571417	0	1.39170317792911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117133931-1	2.58188414298287	0	1.46413884404445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3856910-1	2.15630543049504	0	1.45250500264608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87020925-3	3.14437961710112	0	1.46907051469116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33092535-3	4.97471168789144	0	1.37662939645745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120898347-6	9.68365277839163	-0.146536332679043	0.523010528268517	-0.280178552359485	0.779340520696246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55212181296637	3.54356663220656
Merged-chr9-106295472-3	4.14275374722516	0	1.37964934671455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84514320-3	3.95207439954429	0	1.39610238778756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54740304-2	5.64491856215923	-0.591742545296305	0.801790024154899	-0.738026824317267	0.460498148796347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0509200531463	1.338064021838
Merged-chr15-84245985-3	3.65995197935199	0	1.37391037646728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91969537-3	8.22364821445966	-0.038938561687283	0.756152425898289	-0.0514956513444032	0.958930566980324	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31669796319085	2.29190231850885
Merged-chr17-79580444-3	3.79681416549595	0	1.37552372881724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17769000-2	5.29927583884807	0.0421460499933849	0.901997365682078	0.0467252473198906	0.962732207866944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.338064021838
Merged-chr8-109014934-2	2.72780718038941	0	1.41385046393509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76766885-2	6.43857856345267	-0.404635288338644	0.695707430766941	-0.581617028141525	0.560824670554148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4044790941682	1.68580115571326
Merged-chr12-13215083-4	4.71382136220355	-0.0326163476281562	1.18940607610947	-0.0274223818788986	0.97812284680198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr13-3776654-4	4.46033115547029	0	1.37293309684483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53421927-1	1.88020930507903	0	1.46196726257924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172411363-2	1.71099254526127	0	1.66739677775468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50472607-1	2.42363905796295	1.68143096837303	1.15992339346695	1.44960518758685	0.147168648573555	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26428495695095	2.80691711674685
Merged-chr1-127850236-4	7.0224347789027	2.2388407465841	0.953220729941093	2.34871176870278	0.018838483300303	0.308260419542797	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.50773376845066
Merged-chr11-111954947-1	1.26402008443285	0	1.96936270875648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86823361-1	2.5339057258857	0	1.43974921313025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32730946-1	1.74955749359575	0	1.54993911104754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34951452-1	1.25203477661121	0	2.06649239625007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118661547-1	4.35808408439463	0.182346311055838	0.873037365175751	0.208864268964169	0.834554198183696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44445968990951	2.49425566442921
Merged-chr4-141645178-1	4.65576027007555	1.26535560888597	0.804515043056829	1.57281783579601	0.115761004529411	0.994115794192827	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64492808120042	3.23365829305427
Merged-chr13-75778372-1	3.5726624628225	-0.236963529926314	0.92051896839174	-0.257423842487808	0.796851599265306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16286647593625	1.6044622311735
Merged-chr19-25018503-1	2.30772611632854	-1.02707886045915	1.41461266538704	-0.726049529733379	0.467808407520458	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0.724326877898254
Merged-chr5-105844529-1	2.60134563701713	0	1.41565447983012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36507945-1	1.67903353212889	-0.0324571978165351	1.24687373273926	-0.0260308617980345	0.979232722631252	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.14143228603163
Merged-chr5-9073419-1	3.2890915388527	0	1.38932675520046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148557413-1	4.14142653110753	1.62864120526019	1.01475377973881	1.60496195015838	0.108502178604298	0.958879845025369	C57BL6J_F1_Control-BALBCJ_F1_Control	2.035112151504	3.46206290878919
Merged-chr15-63978196-1	2.17879659278524	0	1.440513377812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122369774-1	3.20285989102411	0	1.39961779856053	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68391428-1	1.27149968624046	0	1.47874480228457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34457531-1	2.0470859114618	0	1.55339301384111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62926687-1	2.13161238497496	0	1.51483325906258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121369431-1	3.26194706342917	0	1.4174558595307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59748989-1	1.44993362939693	0	1.44548978213578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-143216465-1	2.10148586473623	0	1.42971089682524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5793063-1	2.06340602988309	0.0309621649465393	1.30336537427648	0.0237555527848259	0.981047593773256	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.723581231604105
Merged-chr4-11602647-2	2.73044069614397	0	1.44785579629208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105660784-1	3.33975982178131	-4.96508616683377	1.35514111224553	-3.66388866957654	0.00024841479372759	0.0124571769116587	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87613732694396	0
Merged-chr2-78419094-1	1.212777596558	0	1.72800701015078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56430311-1	1.96116480875957	-0.686142251148056	1.45762903673725	-0.470724878453239	0.637837215938717	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr10-43846371-2	2.89651079354959	0	1.39881559788826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157427840-1	1.70395414495568	0	1.68830856269869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34639442-3	3.64722636096757	0	1.39710386715882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34203645-1	1.96997878986594	0	1.50989039904662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116483899-1	1.9143735646077	0	1.4450707312757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54223698-1	3.25616645006644	3.18326742018467	1.23012243086589	2.587764713748	0.00966009393955056	0.196377354697094	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22617999775229	3.94763630157124
Merged-chr2-167345219-2	3.63076058183167	0	1.48745327269439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41602774-2	2.56838696638346	0	1.46925117702896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121248180-6	11.4296095337271	0.403487936803194	0.584536583304016	0.690269776653724	0.490024550499252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69937793024466	4.28170819192079
Merged-chr16-9515913-2	2.59083235405893	0	1.50170476238151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30079881-2	4.23041388942246	-0.473984791253584	1.12539703805052	-0.421171173575014	0.673630092302183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	1.11893902259477
Merged-chr2-36217802-2	2.74196201851999	0	1.41720491523104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100429148-3	5.14301482712199	0	1.39058620403527	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110352499-2	3.04206224404339	0	1.44032498766011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36016532-2	4.24428931174377	-1.91306701527982	1.1783092649567	-1.62356952641811	0.104467713614199	0.937243842936826	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25624284013603	0.723581231604105
Merged-chr6-134246208-2	4.61036693635951	2.38055442257364	1.17116243983761	2.03264239152319	0.0420886653919412	0.525349658333073	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.45451904642141
Merged-chr8-83328194-1	3.14311148038635	0.65270765792223	1.53064341107386	0.426426986978179	0.669796740166132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.601513806634888
Merged-chr1-161649575-1	3.42557023661982	2.09619915886177	1.21614529736885	1.72364203800066	0.0847724846253433	0.821563111383319	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.53640382118252
Merged-chr6-114836984-2	3.86363177711509	0	1.37820848081747	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106981620-2	3.36575254054128	0	1.40348228494417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32754082-4	8.66704549828127	-0.227584043708446	0.642106046249363	-0.354433734174904	0.723013857069011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41932240981715	2.3412483114864
Merged-chr13-35947737-5	8.60044839068196	0	1.35929343349156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92674964-1	4.87050924899923	0	1.37340776591164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123171783-6	12.971936285147	0.461767499639461	0.467966053302222	0.986754266428044	0.323763119749058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.598187258206	4.21935023370179
Merged-chrUn_JH584304-106828-1	1.25904141680761	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26502835-2	2.72126274024488	0	1.39297051892311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47628284-2	5.67322935977248	1.19361463627737	0.762462781692047	1.56547265642071	0.117472123907521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25838937565246	3.76941499506184
Merged-chr11-44528664-2	4.13027768138837	0	1.35862987497741	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35205283-1	4.27199719357259	-0.0935978416977859	0.855877606312837	-0.109358909506945	0.912917823684193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57074540165941	1.6036906679178
Merged-chr14-46145852-1	1.18197133174575	-2.35070279878367	1.55693530064372	-1.50982690020052	0.131087599116921	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	0
Merged-chr1-55804118-2	2.39368129771452	0	1.45338952395344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180289055-2	1.37991887153751	0	1.63532284969353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99465034-3	3.22005544418052	0	1.46296008208029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54088337-2	3.50131028841595	0	1.3849925701898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86920527-1	2.19664428772233	0	1.47464651986436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28502298-2	3.02470702474212	0	1.41074018674417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81814452-2	5.02662755415134	0.821699711496053	1.18080185962084	0.695882806078831	0.486502225894845	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.97908007631626
Merged-chr6-108331453-2	6.37588525501972	-1.6008893538149	0.71273307789439	-2.2461274823169	0.0246958434905571	0.370978534857117	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5253428955762	1.81930970870026
Merged-chr4-128796607-2	2.77020833670182	0	1.40179113758559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50676277-2	6.2862789696802	0.21342252827641	0.757564600646445	0.281721886284406	0.778156771122035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74516728405425	3.37071801052226
Merged-chr8-90001122-2	3.96786131191499	1.90839149001784	1.18621942866219	1.6088014105199	0.107659772374026	0.95407198671009	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.47418322843784
Merged-chr3-15160086-1	1.48633297012334	0	1.46093197725345	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33260020-2	5.61009255294676	1.27228101298746	1.34918123104507	0.943002306667101	0.345679723073771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr2-4890601-3	3.42918140722091	0	1.41969072788914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8989061-5	9.81194376399189	0.155893303564061	0.689519509703406	0.226089764495739	0.821131605248168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89762895552055	3.38183787798078
Merged-chr17-66750899-1	5.22148586165776	-1.53673858072596	1.25813570603343	-1.22144103641322	0.221919077813072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.376242425970964
Merged-chr2-22816432-4	4.30298476748438	0	1.37437693969931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89022583-3	10.9166341775117	0.541139260210098	0.638354514369303	0.847709615940831	0.396599709768091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80082899014313	4.29157534495131
Merged-chr3-59229328-2	9.60488810358956	0.482723707340197	0.544512912209671	0.886523894137368	0.375335284272801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36706866445826	3.81918759023388
Merged-chr2-23097221-2	3.01591758132642	0	1.49546008428901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80822227-1	3.41748880881058	0	1.40915150180759	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3825756-1	1.65784910761342	0	1.61396194395473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46342480-3	4.68175857904588	0	1.4045111897598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53179512-1	2.76797403991272	2.20149457221749	1.3154829544664	1.67352573041167	0.0942238455716051	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.38572824442771
Merged-chr1-62328966-1	2.68353503524497	0	1.42259860249336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99974589-3	3.64672874567893	0	1.42788828518793	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34786208-1	3.91869553264364	-0.746558669121189	0.971991265696002	-0.768071376224363	0.442444781260665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55093367249462	1.65345633230702
Merged-chr13-21771641-1	1.84009684722586	0	1.73984560833056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50946536-2	3.11832980207144	0	1.4153324759545	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43788564-2	4.20173374757945	0	1.38841507486822	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-33170683-2	3.17126482232257	0	1.39538183865909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55789345-3	3.83320302197919	0	1.45046204321457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115040636-4	9.35909221943497	-0.551130852560811	0.644757731168058	-0.854787505319819	0.392668796551549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75992885595473	2.69116601303432
Merged-chr13-58319406-3	3.40501521462279	0	1.37729920864285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41461927-4	11.8323505459251	-0.102102326024554	0.518753881270618	-0.196822288393231	0.843966608657488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01238056998785	3.97906458807551
Merged-chr16-20047536-1	1.2749578076202	0	1.56719530049344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75783952-1	3.20940870589397	0	1.400224446928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76304879-1	1.43440499843716	-2.83462524022636	1.68108456441511	-1.68618836924042	0.0917595233751091	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0
Merged-chr11-118178428-1	2.85868827857647	0	1.43161812785469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47107601-1	2.95800171361332	-1.07196817355367	1.26472842498	-0.847587634136252	0.396667663457987	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.577068348605183
Merged-chr13-117203022-1	5.34741775365135	-0.819749586569627	0.807094860619238	-1.01567935389984	0.309782102787383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18395292683035	1.74618975104912
Merged-chr4-150099163-4	9.23834230335477	-0.877706731626239	0.601314113811981	-1.45964764748675	0.144386936968455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16342327197556	3.40229626003495
Merged-chr7-24642655-1	1.9799467331543	0	1.52043224591086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117675790-2	2.68374815070732	0	1.40119963602903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141913723-1	5.21700944215729	1.11938058012826	0.687677070133355	1.62777069171608	0.103573517228894	0.931985819690424	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26276386882201	3.59332266474121
Merged-chr7-16014109-1	1.97809038783511	0	1.53399088926518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-104486459-1	1.87661613272688	1.17265632424689	2.04640507869974	0.573032356327018	0.566622786140434	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.35659698994568
Merged-chr10-67711119-3	3.0199942103278	0	1.42987457659542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45338340-2	4.51562291588523	0	1.39925361303717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97850732-1	4.9002428752126	1.03764233472181	0.964926608190312	1.07535881580453	0.282214112969001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	2.34695791138986
Merged-chr1-180237640-1	1.67181480512399	0	1.59602073977199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41299582-2	2.63284101352004	0	1.40506838816509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20468931-1	2.08731623641033	0	1.49426332622031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52047781-1	2.19993031820208	0	1.42949736658634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47013044-1	3.25489117588606	-2.84803195271788	1.21885528851126	-2.33664486634549	0.0194576575088657	0.314296623827883	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	0
Merged-chr2-180346870-1	1.74158178778866	1.25740359256897	1.66544593949241	0.754995141392704	0.450251897453046	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	2.11841555751276
Merged-chr11-97821032-1	3.49885462259857	0.687024614516847	1.11361863349836	0.616929884118949	0.537280974502096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	1.48018155595824
Merged-chr10-100030939-2	2.91239034272891	0	1.41076171080558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27399226-1	1.76744024500783	0	1.6460583004622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183116739-1	1.38791127524479	0	1.61089948304623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173762686-1	1.52982915501762	0	1.66815571102961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55815010-2	2.55931896488745	0	1.42620955641379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181930349-1	1.82697400532466	0	2.34360384739106	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16885936-1	4.08730233662317	2.99073631396758	1.12196962201916	2.66561255783849	0.00768482014825638	0.167542425835445	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	3.11753273036831
Merged-chr7-75633484-2	6.05814915267337	-0.732681387729589	0.862429214337689	-0.849555390226732	0.395572322546249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46595320137633	1.52633957112176
Merged-chr9-96438761-1	2.59676757795064	0	1.41202259152769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4199393-1	1.9794612025758	0	1.50465631037597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106500858-1	1.9269237458561	0	1.46449377714956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65013681-1	1.89113065813245	0	1.49027098105918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128458233-1	1.11235105743516	0	1.67349330563805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55684787-1	3.49612734170075	-0.797770680805247	1.04578161951805	-0.762846339920281	0.445555041156854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12643658929939	1.67023962132385
Merged-chr11-107466594-1	2.4816556843322	3.514167014193	1.20672498263036	2.91215236675799	0.00358947497247899	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.97311307185425
Merged-chr8-14883683-1	1.28587027276157	0	1.70713287516495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133126608-1	2.09937133513918	0	1.42556793707307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30628770-1	3.0070933048332	-0.038052336821472	1.06310682239003	-0.0357935214223575	0.971446998914601	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.27743081564928
Merged-chr4-155506635-1	3.87756323651293	-0.49157330790403	0.836076460215861	-0.587952575266996	0.556564125537726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	1.79065725465852
Merged-chr3-133549599-1	1.13049729391884	0	1.59961167981245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-175175450-1	2.44074841448224	2.52164708192834	1.50606518332334	1.67432798384196	0.0940661576831273	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	2.78337690648232
Merged-chr11-93972430-2	10.8422751631178	0.135256499065347	0.467860194043332	0.289095975223787	0.772507933472337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23140286551876	4.44957006975476
Merged-chr9-48448126-1	4.16505703424244	-0.985663610815929	0.980106532776766	-1.00566987144083	0.314574400760217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0894787037384	1.28728541095094
Merged-chr4-105222847-1	2.82290973070013	-0.982923218978543	1.34726587965103	-0.729568850383964	0.465653768352495	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54084633208408	0.67591700901439
Merged-chr7-130117342-1	1.81264376223129	0	1.47061472419228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53914383-1	2.41916140054012	0	1.44030706346731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84759243-1	2.49416811285056	0	1.46659823929358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166575154-3	3.98380316873875	0	1.37991562091087	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43802230-1	2.60439466635431	-1.90823628584513	1.37638864942184	-1.38640803718245	0.165622343659583	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr17-34052032-1	5.08440080829027	0.179230769083441	0.888031191948852	0.201829362198534	0.840050126172954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49000549845662	3.66347698331388
Merged-chr13-56421400-1	2.42843184346132	1.20274800857891	1.4573734041755	0.825284724651168	0.409209962069679	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.724326877898254
Merged-chr1-165683529-2	3.7265453049179	0	1.38061823228345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101132719-3	3.94827834218018	0	1.3883114350141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98316073-4	3.59695581684992	0	1.38164721146614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101232373-2	3.41557073538726	0	1.38413360046734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69092925-2	3.57000045951964	0	1.39971009077979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155044714-3	3.89432873222656	0	1.38672754049259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117825586-3	4.34227473804263	0	1.38155836076505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32963986-3	5.84387060009643	-0.925915559131893	0.975529388496715	-0.949141635352189	0.342548581065509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76901627090616	1.27336184263348
Merged-chr7-106810273-3	3.10867151789584	0	1.43910041958802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11788000-2	3.88741281373042	0	1.37306304993634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20430517-2	5.7004710431268	-0.528077903458258	1.03666723717493	-0.509399626535267	0.610472138067648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0.788686275880602
Merged-chr14-121000363-1	4.60145989368922	1.06744156908002	1.29567627460823	0.823848973697369	0.410025376656633	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.948471875794396
Merged-chr18-6470795-2	6.57637198622308	-1.44732113740228	0.801713410680108	-1.8052849286561	0.0710301068257024	0.738264928668902	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6132745855972	1.25171540477662
Merged-chr12-111894207-2	2.72647748157112	0	1.3926735771926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184908797-1	3.76372917545399	0	1.40612578794787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38002279-1	3.168979502003	0.23473785143161	0.938138109843514	0.250216731383789	0.80241974694403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	1.88450176998186
Merged-chr2-167227642-1	2.29004684222024	0	1.47571833092918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49164519-1	3.52052180538053	0	1.41050127870802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51995379-2	5.13754313912564	0.610347645446438	1.33592675336754	0.456872088164942	0.647762987196627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.827114643704772
Merged-chr8-105453433-2	4.17779559002282	0	1.37999484932248	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141403524-4	3.94978588333854	0	1.376317074496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107455465-2	4.58989707867937	0.819892608612462	1.2131082181641	0.67586106196962	0.499128861697718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.788686275880602
Merged-chr5-67764973-1	1.84722849348391	0	1.43310017090504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84622541-2	3.92721685236135	-1.35749306524166	1.42605505609427	-0.951921918750887	0.341136582460425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr9-104272343-3	5.10236780522514	0	1.38214734125437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113475449-2	5.46192095449561	-1.17206658937236	0.84883708606679	-1.38079097698629	0.167343238620577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93952175590133	2.67984469656309
Merged-chr12-111524998-1	2.58379503059838	0	1.51778578078568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46458637-2	3.32894502224392	0	1.3814830765802	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164706222-2	2.61943896370737	0	1.46642111125302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59778693-2	3.1116400629172	0	1.38598250514998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153895150-3	4.16576034170922	0	1.38702447717586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9485774-2	7.82539165641997	-0.0365438237339344	0.674778695822499	-0.054156753851558	0.956810275515645	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35441732747624	3.31958000625322
Merged-chr8-79391607-2	2.97260855870527	0	1.42372004389901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36698784-1	3.39283308049393	-1.21100210470343	0.799760694611417	-1.51420557782204	0.129973707452902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01944155124387	1.45526469271556
Merged-chr15-97140224-2	2.41958878192317	0	1.45248399219068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-15914426-1	2.23488528339306	0	1.44337174287177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113245753-2	2.72014700670538	0	1.42105602655793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87838818-1	5.46277524515832	-0.735752558800092	1.0719804681653	-0.686348847436871	0.492493152815401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.879366456215217
Merged-chr17-12029506-4	10.357046266948	0.928467375940221	0.604634341522603	1.53558491831962	0.124640215436017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.777595139262	3.55095646186709
Merged-chr9-105121970-2	10.6040999584412	0.280226408831786	0.526222542043073	0.532524524213273	0.594362760989058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67601824743674	3.74760445687456
Merged-chr11-89020156-4	12.5838867195141	0.88024769100079	0.557370853615235	1.57928547086971	0.11427059289484	0.987378993431135	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6460552043594	4.76262286764811
Merged-chr4-48380784-2	3.27082748604118	0	1.38818663400289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98829588-2	3.62878372076074	0	1.36827371484024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96999111-2	3.23301008242674	1.76623277535565	1.2977539057941	1.36099207058436	0.173516195316565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.859510663435501
Merged-chr14-117779201-3	3.87406430559576	0	1.39280881921235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61860835-3	3.52816456621261	0	1.4058142588836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105199511-3	3.7733171587854	0	1.399368235846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88559332-1	4.30330977283605	-1.13170327969448	1.28391330660022	-0.881448360942073	0.378075192040553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0.303163067301871
Merged-chr1-191333585-2	3.37828591759676	1.22608175604938	1.36187475520955	0.900289656856684	0.367966123952096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr7-27725894-2	4.0138636020248	0.352481600178963	1.11958159345997	0.314833329020397	0.752888204699516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.10056930386922
Merged-chr10-81517441-2	2.99059413310216	0	1.39834635335406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64829885-2	3.41455673072272	0	1.38792636739288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57517310-3	2.74336637982303	0	1.41324239135445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53496374-1	2.23637288658336	0	1.42952728314213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-93820925-2	3.61366714172471	-0.0360137297345125	1.13155150915542	-0.0318268584709792	0.974610127520146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.02674429890598
Merged-chr8-71741972-2	5.99179367845304	-0.885564822773101	0.959433735120738	-0.923007801744284	0.356003139521594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62703785442709	1.08593863411001
Merged-chr9-13492997-1	2.02130257603777	0	1.46132760733928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129747567-1	7.16277853460225	-0.53602570346026	0.715806928019543	-0.748841178365384	0.453952937118833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53339859656585	2.69383587858317
Merged-chr11-58235435-6	11.3819074385972	-0.98390531403508	0.55451362070717	-1.7743573418094	0.0760040612119721	0.769615033486912	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16930775921503	2.772813823257
Merged-chr8-70503246-3	5.20837651198208	0.836616654591334	1.04883179651841	0.797665228465116	0.425064787229139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.30064958020929
Merged-chr10-40192702-1	2.66563308434161	0	1.41654580500211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56799844-1	1.70919100993509	0	1.56534134510338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43916217-1	1.6099286774759	0	1.71192547476341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-114665866-1	3.38694254123568	-0.0795171180029518	1.2204327063212	-0.0651548566267477	0.948050703905819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.67591700901439
Merged-chr10-43829158-1	1.90401483105299	0	1.49970688623572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13087398-2	3.03121476468455	0	1.4053304495652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110193269-1	1.28323714148388	0	1.54154682638135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102138552-2	3.41578657407822	0	1.3814849143419	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83598231-1	2.6381856207855	0.178695180386867	1.47605268766337	0.121062873893578	0.903641235175568	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69486619385668	2.17763454888709
Merged-chr2-155033620-1	3.37367281177733	-0.271961514028071	1.10015354219976	-0.247203234454241	0.804750942242378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.09982365757507
Merged-chr2-102829316-1	5.63011106272302	0.294001802639195	0.833480739153859	0.352739768093096	0.724283542681921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7464719987851	2.25209014842511
Merged-chr10-121533472-1	2.13166191413656	0	1.48444012512801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82834671-1	1.51023597060378	0	1.54886700813901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10314628-1	2.03130986761973	0	1.47531537888535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124508552-2	3.86055607570699	0	1.37415648560286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148675952-2	8.36979236410216	0.136650810739133	0.679193793165223	0.201195611788947	0.840545622623957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02420982313703	4.30356086701584
Merged-chr1-39736457-1	2.20016364403472	0	1.54325738477939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116004180-1	2.62474766130888	0	1.40363975754111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129904863-1	1.28419403653884	0	1.79987253465938	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-119761922-2	2.57173306273452	0	1.44765704831408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73692477-2	3.28364898985687	0	1.39087279435991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86493314-2	4.71137462835311	-0.578808960589596	0.722157019140252	-0.801500151973436	0.422842156125259	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23403801052056	2.09906462022006
Merged-chr8-83877066-1	2.74389587515164	0.177327118226395	1.28335421776678	0.138174726643257	0.890102328699981	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.02186287315087
Merged-chr14-40914936-1	2.15302256701938	0	1.47248467666992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87740716-1	4.45912189727999	0.637643706518009	0.846749612794612	0.753048713436704	0.451420641748889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	2.04553357655422
Merged-chr2-166108527-1	4.72426784053587	1.83812942442623	0.780988390536386	2.35359378794837	0.018592916835362	0.304976574005264	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	3.60265626473529
Merged-chr7-45731245-1	2.89438184682621	0	1.41593770057803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8975080-1	3.99313789859527	1.17676128996189	0.830801653107225	1.41641664476805	0.156653553424897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34310688897156	3.71681634635277
Merged-chr12-108763726-2	2.17847686050188	0	1.43272404983156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70111965-1	1.92449297131879	0	1.49886295623581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47535586-1	3.86500179164596	1.63910433698054	0.880057708213292	1.86249642686305	0.0625331486303483	0.684640367854402	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12465288650598	3.60929111715751
Merged-chr9-116140628-1	2.95400494924717	-2.41746717025339	1.19196034847507	-2.02814395071628	0.0425455583764148	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25838937565246	0.827114643704772
Merged-chr10-127129646-1	1.65758546649058	0	1.62772368135818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70930321-2	5.77300203154249	1.44546777479976	0.849353290494549	1.70184514615598	0.0887844008910985	0.844377494643396	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31260716574699	3.87098072326726
Merged-chr4-153514202-1	1.70904094404802	-1.01028896395528	1.48350638375522	-0.681014234261612	0.495862483673907	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38601560292234	0.67591700901439
Merged-chr5-139584027-1	3.03256374608202	0.83135415235519	1.12760387696546	0.73727500351673	0.460955129972319	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.2636608194585
Merged-chr8-69985324-2	3.00572686619048	0	1.3856389403245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79813995-5	7.65261532801144	0.632244199396387	0.695520628383385	0.909022929867554	0.363338022267885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.81428474015231
Merged-chr4-105495831-2	9.15106179499908	0.670361587679692	0.586842929233119	1.14231859035213	0.253321616611271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18700239381742	4.08024589988382
Merged-chr6-113837964-4	4.81633632561831	0	1.40544506285645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37302884-2	3.23769365690855	0	1.41530056491081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123940028-1	2.45665839325495	0	1.4205401575163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120189977-3	7.719511574971	0.251845571238742	0.692333372219502	0.363763443081428	0.716034663296742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10061834270669	2.79728088350829
Merged-chr6-3590521-3	2.87012300002908	0	1.46633208305732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114190950-3	3.60340491487136	0	1.37890353766112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105559327-3	4.19385332095098	0	1.3651907010499	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76783796-3	4.89340997585703	0	1.3751239663477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36061391-1	2.87363540523876	0	1.41900629336197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28180252-3	3.39838299097921	0	1.42362213261926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85480181-2	6.45213565570747	0	1.43876392181371	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116171141-3	10.6272219083818	-0.382987330530033	0.618421533440965	-0.619298180642336	0.535719942793019	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71474137709687	4.07992872267383
Merged-chr13-75795422-2	7.1718524499852	1.4867355692169	0.753333740401032	1.97354172458205	0.0484338756930682	0.57737215982445	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69757189012738	2.73360067342748
Merged-chr6-72051935-3	3.44034848997622	0	1.42365097556507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90240413-3	3.63892155962828	0	1.39185774692468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57674078-2	9.39042545229841	0.567415159259229	0.65573945675858	0.865305806156684	0.38687096487278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35979880313945	3.08119653628836
Merged-chr4-3418898-2	4.80862417859444	-0.573336837992127	1.24727903299935	-0.459670068062809	0.645753057206062	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.55634759613363
Merged-chr18-84846682-2	2.26670537057227	0	1.42780926241593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57788166-2	7.65719176763563	-0.175205513694464	0.791237750572019	-0.221432197298221	0.824755924766671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12402404955102	2.97728309531243
Merged-chr5-65577025-1	2.10566963193629	0	1.40491596262257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70289498-2	2.82815882945721	0	1.41916072668068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9555557-2	2.9412938447719	0	1.40541616096319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17676612-2	2.32048542049539	0	1.49048160985598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44692062-1	1.8502903080453	0	1.50115574612021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83625418-2	3.48489609959142	0	1.38332422727142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35478187-2	1.56523892261235	0	1.65293551328237	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98584745-2	3.08227108794017	0	1.42368302449349	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54995379-1	2.74377879652139	0	1.4021942841967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142294012-1	5.22724896282853	0.888881006963188	0.875541287322965	1.01523596868974	0.3099933587429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42763579811059	2.68501495668341
Merged-chr13-37482774-3	8.45319273622917	-1.42673196145735	0.684774994792272	-2.08350476040696	0.0372052382347489	0.484842987745694	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83073178516983	1.58922372983786
Merged-chr12-111738955-4	4.92774135997674	-0.0371063820960789	0.908417943335755	-0.0408472579920895	0.967417664345112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.39949824061849
Merged-chr9-47732109-2	7.04147721727834	-0.698633771337106	0.794169646063537	-0.87970344220536	0.3790199841601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3194495740227	2.29190231850885
Merged-chr2-122143948-4	4.49378548594993	0	1.38073787791195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80099921-2	2.46644774247907	0	1.43399193348131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46923589-2	3.53265784569198	0	1.376846032116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24395015-2	3.06150279721333	0	1.39036456837669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101381724-3	4.80687201267503	0	1.38871461334838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61919316-2	5.20160223532506	-0.81411577470478	1.03641482160688	-0.785511513085619	0.432153722745086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31016258956889	0.730937814817307
Merged-chr2-142883040-3	4.7711844137313	0	1.37864822470722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49983056-3	3.44755016081514	0	1.39057418197907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-17166852-2	2.48503145796	0	1.39815170219589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31018493-3	3.76503035282322	0	1.37157484835504	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68128074-1	4.28053873464305	-0.0790643987964239	1.07493684790691	-0.0735525988809261	0.941366389529721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77917504929676	1.8314473603367
Merged-chr2-4591158-1	2.70362666187886	0	1.45412952711768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44985147-1	2.19255011694534	0	1.43946654750163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56874721-2	2.9839217689579	0	1.48512222203351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42795687-1	2.92989070737643	-0.915862008465633	1.29061051222076	-0.709634703726151	0.477930693287067	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0.662147012823607
Merged-chrX-10721519-1	1.94049579690934	0	1.47279022952154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62937900-1	3.28898978801436	-2.04426581379184	1.32215188452889	-1.54616563929813	0.122064569594217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88508609669565	0.55634759613363
Merged-chr13-92702767-1	1.53166006397892	0	1.56104953055871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-73087365-1	2.56111539873354	-0.154138543797329	1.24108973472327	-0.124196131419697	0.901159985205189	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	1.06872581468896
Merged-chr16-93835341-1	2.61563715651434	0	1.4313593679143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-51750549-2	2.30221332696249	0	1.51073166380029	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109212975-1	1.49979211971759	0	1.56313230072853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29444902-1	2.43578367920355	0	1.38676440634485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67273021-2	4.4256884503178	-3.20087107591964	1.32278372267262	-2.41979926200817	0.0155290769669477	0.27345160182906	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51541939634152	0
Merged-chr8-122415774-2	2.67780195074757	0	1.44709280129447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29501703-1	3.41829779187207	0	1.38708079660052	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81124080-2	4.04256042520071	1.9943156777022	1.19525310518405	1.66853001180458	0.0952105593285847	0.882146036226783	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.25298535761957
Merged-chr14-33231637-1	1.7378565318773	0	1.52037194664079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132168669-1	1.72460981699391	0	1.58068240225496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73428589-1	2.19168773755222	0	1.44039194826867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125120207-1	1.62360542030129	0	1.46507738284916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63556550-2	2.90428410093616	0	1.40190502898152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62557225-1	1.25941190150443	0	1.78413852580991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42302556-1	3.26410174271515	-0.155998093917603	1.2616977317195	-0.123641415844508	0.901599198960514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.577068348605183
Merged-chr2-21056390-1	1.88727351293288	0	1.50160013508209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123642607-1	2.47868132289151	0.764406404701102	1.48991017172526	0.513055363476005	0.607912593963115	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62354617165363	2.05756761729664
Merged-chr14-22023696-1	2.33568613450384	0	1.46030753068698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-187586780-1	1.34702741408282	0	1.58134843918146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89511061-1	2.08915610585989	0	1.53174742413912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124720442-1	1.25219149588928	0	1.61750741758996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171110380-1	2.24598793598019	0.286815406785655	1.35198990783882	0.212143156633569	0.831995351731344	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8499596259337	1.07036642516009
Merged-chr5-48838992-1	2.15136093721687	-2.5330800509804	1.52243053312868	-1.66383949602928	0.0961445087529793	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30166531184945	1.06702908365212
Merged-chr9-32137993-1	1.59404005044183	0	1.58707883568313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73996681-1	1.54236261639999	0	1.60250942343381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8038013-2	2.52564231289466	0	1.45199467489435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52914143-1	2.21275687231272	0	1.40656176511677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76622299-1	2.66412610469791	0	1.39903110361766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109707604-1	1.8374160396213	0	1.48007470168848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65038866-1	1.75965365264635	0	1.47580236807212	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122466396-1	2.79698685453501	0	1.3946652427718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66231735-3	2.54340478328723	0	1.45165454123817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-112801746-1	2.41494956828658	0	1.44160190060767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110630726-1	1.63695147478384	0	1.56487874829464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75098518-2	4.39684962521754	0	1.44141143930579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90868345-1	1.82030989032507	0	1.43703220205556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60091243-2	2.9080811449576	0	1.47991599161427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95529233-1	4.27819297103962	1.02859172717993	1.13078164249015	0.909628957996543	0.363018221496968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26927213904674	2.45498178950058
Merged-chr19-61111180-1	2.23603640252396	0.546208195585501	1.31317370118574	0.415945122181701	0.67745016039715	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.18984215491549
Merged-chr17-84037969-1	1.74303078285478	0	1.47269232928484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145107063-1	2.18536721360539	0	1.45080393277707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14678092-1	2.01620461340069	0	1.41268722764555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84194471-1	1.25637187534095	0	1.52163922934166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24318859-1	3.36489186058311	0	1.40186470925615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88628723-1	2.84539888056746	0	1.47438483558862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70650164-1	2.36685160133137	0	1.41985445744557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-43416067-4	5.33896707744593	0	1.37484658048314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55622251-3	10.1112845004758	-0.0239403172852318	0.618428251609971	-0.038711551781322	0.969120363324337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.04105997869936	3.99372457167598
Merged-chr6-108566331-2	9.96037837789825	1.12423443593304	0.640524778627568	1.7551771195205	0.0792290163084003	0.790288563905291	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69733277475078	3.40495047212826
Merged-chr6-116670331-4	6.75131279259284	0	1.36119433361368	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80877869-3	4.80468271305504	0	1.4101268823383	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101772877-2	3.11599212631204	0.523379907679195	1.24918060034674	0.418978574862527	0.67523179059521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.67591700901439
Merged-chr4-136570229-3	7.19074150043628	3.07137281758299	1.13480757594003	2.7065141991485	0.00679936746252941	0.153003286217648	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.83189312414735
Merged-chr10-88120743-1	6.66239499965173	0.0837009412641876	0.810017872462169	0.103332215386515	0.917699308281226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41013160564203	2.31802057512815
Merged-chr6-83600067-3	4.73774390340078	0	1.39869653673093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43804331-3	3.59838269444356	0	1.37510072560079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34420172-1	3.72485950662112	2.35185094290566	1.07911418839115	2.17942731937574	0.0292999384803238	0.417320153770958	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.1985101063361
Merged-chr4-128680682-2	3.85393428903094	0	1.38673325521125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103915871-1	2.2078032126212	0	1.39902793285996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36311635-3	3.76144689572671	0	1.40958563181216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24021509-1	4.63502721195775	0.828259510781579	0.885131057508262	0.935747880221509	0.349403012132516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.42163209497338
Merged-chr4-129787285-1	4.13363351085424	2.1199967973051	1.14883821090996	1.84533973293413	0.0649881340601727	0.700473475483172	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69442907999601	4.46771043151279
Merged-chr7-107611048-3	3.36226792681865	0	1.37901680520685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98036181-2	4.5571211606121	0	1.37515113714618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121674311-3	3.0552153716732	0	1.43486013135685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83271274-3	4.96591320856168	0	1.36428714002236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33802378-2	6.38459325794495	2.05834663336304	0.670822410397674	3.06839276902336	0.00215213550329087	0.0659830422015726	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50921536809972	4.14578769397986
Merged-chr13-91452467-2	2.46518303744018	0	1.40806558944999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132871503-2	2.93077001326122	0	1.52286162810272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73367810-4	4.26258098399121	0	1.36571646574112	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41992797-2	5.70735866976661	-1.1597714646826	0.78969091960298	-1.46863973726035	0.141930530734154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20119714125484	1.59184561974686
Merged-chr1-188980267-3	3.75032866995419	0	1.37421851727695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23979531-4	8.31518579727354	-0.297782665287869	0.655314103057975	-0.45441211153291	0.649532236681301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79125192100576	1.97311307185425
Merged-chr2-127080870-2	6.0250486122534	2.06172619497986	1.0216307539199	2.01807373854909	0.0435835822596229	0.537102686023768	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15025660736152	2.36284816441315
Merged-chr2-127087469-1	2.51908379094427	0	1.41402525518659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-130106808-1	2.00619661753553	0	1.40436543349429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79831795-1	2.65538837707749	0	1.40074386599273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118865258-2	6.89334176901179	-0.873163903756419	0.697367133059186	-1.25208640092637	0.210538382435292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21212669873896	2.28073767661769
Merged-chr1-43478072-1	2.75980644619125	0	1.42892849076421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66542908-2	3.98670823082997	0	1.37711092534645	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35129357-1	3.66131782475515	0.320283943199416	1.16371462905386	0.275225502200499	0.783142995339004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97898450809916	1.53467426421905
Merged-chr16-89833759-1	1.49530035049312	0	1.52424286424864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100849589-4	5.30532367127542	0	1.37631696085746	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108082565-2	3.73028422111884	0	1.37983046816587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19561454-2	3.9729443621508	-0.854299965859132	1.23205233127419	-0.693395843807715	0.488061169806635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0.577068348605183
Merged-chr19-34241423-2	3.21733755884941	0	1.39637873678801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134016347-3	14.1683028274722	0.27159637582924	0.566114238415441	0.479755422844408	0.63140131350847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.08601581051897	4.46041991693539
Merged-chr7-59163096-1	4.51176553663843	-2.30587839347657	1.07480312836762	-2.14539605683756	0.0319211941104986	0.439960494587371	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94640134381309	0.577068348605183
Merged-chr6-55182562-3	4.58247622210044	0	1.38671477375591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-71306358-2	3.61680429365258	0	1.38421243262319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33190880-4	4.87660298319811	0	1.40095397868433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16533582-2	7.5005788103964	-0.140384044982481	0.77922295856247	-0.180159020521501	0.857027728863112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60000191931229	2.76478068850039
Merged-chr5-100618172-4	8.04896920913777	1.06673944066679	0.730901544890392	1.45948445194046	0.144431816924156	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35950768455674	3.76455866515351
Merged-chr14-121937826-4	11.3853305194024	0.119900600607024	0.514813629517153	0.232900983448087	0.815838294759419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11019498436226	4.2562861869157
Merged-chr10-121256649-3	10.9601282063336	-0.0990708412010052	0.606711061003299	-0.16329163512723	0.870288819710382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15625035542923	4.07053210811206
Merged-chr5-132437148-2	1.96125473504981	0	1.63497258049199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54770037-2	3.10050559760407	0	1.43516650355836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100352279-2	3.15023595563172	0	1.44503467764461	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100397247-1	3.69115057713213	0	1.39793067171561	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126982454-1	3.39107250387257	0.497163461323567	0.979596455081247	0.507518640706323	0.611790960457175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30878529292621	3.47889689749214
Merged-chr7-92654085-1	2.78450757739631	-1.29239794436717	1.23378454002389	-1.04750700178343	0.294865804568569	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	0.97908007631626
Merged-chr6-6307789-1	1.18149692002409	0	1.65511186633034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34230814-1	1.40472723604802	0	1.514414406043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84938129-1	1.39134048786291	0	1.67683093718016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34269778-1	6.53052065611641	0.456611763113191	0.585206757125489	0.780257161342512	0.435239522600097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85627742079238	4.63137557986471
Merged-chr4-134638529-1	1.5801992128672	0	1.50825007755242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57842002-1	3.15858444609402	0	1.4374893777398	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142831467-1	2.45309399167513	0	1.41016981985808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10320535-1	1.23059460758379	0	1.53271352221127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10153069-2	2.25779858628839	0	1.45295497558062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103439842-3	6.58342549357314	0.228116031397782	0.906016619059485	0.25177908064709	0.801211827750947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	0.988408630094828
Merged-chr14-76613983-1	2.03179290508216	2.11941599036513	1.32967526912763	1.59393503028423	0.110950587418234	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.58383754133375
Merged-chr6-115375072-2	3.25707364673795	0	1.4039094801789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44660489-1	2.8796167702218	0	1.4397228559502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102002536-1	4.37147552554756	4.46710708497951	1.06867219529171	4.18005362604213	2.91440359908502e-05	0.00211232086990217	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.26619118338657
Merged-chr4-132063216-1	1.41808361381645	0	1.60859303157308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36237279-1	2.31951843430573	0	1.45173330676299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121831086-1	6.40862090029167	0.952085684196269	0.85084370066051	1.11899010765099	0.263144359288481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67800608098903	3.42062717880263
Merged-chr18-75353555-1	1.54241217553189	0	1.55508586507929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43492842-2	4.05947145192664	0	1.38604852052555	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90710525-1	2.61920991690128	0	1.39945605552042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62896081-2	2.43135540987926	0	1.47469911026354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90132945-1	2.47178986439348	0	1.5125280740259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103025989-1	2.58350434872411	0	1.46018570838642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-91576094-1	3.49052084065126	0	1.36857967281364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17297175-1	2.78072377816874	-2.11512588087616	0.993042183010801	-2.12994565292616	0.0331761004702911	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85259595149253	1.76197067039868
Merged-chr14-21877581-1	2.98540342772624	0.752696564819376	1.12367669941436	0.669851537556724	0.502952435886072	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27256041875316	1.6776376524744
Merged-chr17-13146496-1	1.47457092524518	0	1.61111803650776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-8780654-2	2.84189065109567	0	1.40833326502473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76897469-1	1.11563383090597	0	1.61477452909465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39240054-1	2.42565048358567	0	1.4071166015668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92959185-1	2.7697849069418	0	1.44057309855751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173730242-1	2.91495420639558	-1.69311018848491	1.2954699444114	-1.306946715197	0.191230808917994	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	0.724326877898254
Merged-chr15-36702048-1	2.77294023882955	0	1.40733351884003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3006851-2	2.52365003052947	0	2.43349123117785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11532358-1	2.01595376956789	0	1.43409091477364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94041617-2	5.32001897852513	2.00519620972741	0.977789414499015	2.05074444455384	0.0402918403177884	0.509710064657822	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.30266343887552
Merged-chr5-64300444-1	3.47188013793957	1.14255069918302	1.25857545688431	0.907812632872628	0.363977222822906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.610618888618
Merged-chr2-133442734-1	2.50399194854227	0	1.43423606122607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69655569-3	7.5870398437861	0.502827580761407	0.676729259932042	0.743026215257638	0.457465809074808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90466517893628	2.60393487865067
Merged-chr4-3089724-1	2.33144980063897	0	1.46486757648477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110961919-1	2.85294831730143	-0.252809756539136	1.05112682300196	-0.240513086534245	0.809932519379856	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60308582214967	1.27992882773773
Merged-chr8-106343042-1	2.3510283294183	0	1.40014805246064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146706225-4	9.75862208551226	0.240342262505224	0.473625448403852	0.507452171996233	0.611837586966096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96247889612542	4.16664398772932
Merged-chr18-38425145-1	1.28954341392566	0	1.50681863562814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-90639998-1	4.55314512237603	-0.726382092658784	1.43933142152722	-0.504666320622699	0.613793220017975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.33222842662148	2.53878213085257
Merged-chr6-17516213-1	1.56499024615641	0	1.64807376377693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84943812-1	1.03837141818937	0	1.67531307643796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74497510-2	3.49534099995653	0	1.3832859391743	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24935475-1	2.33560903751317	0	1.43714559418117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67545335-2	2.90573690988929	0	1.41153090839292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-152920559-2	1.89188469599615	0	1.61680625892546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54764660-1	1.66146145923035	0	1.75548011471117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119955193-1	2.33586906236803	0	1.43507123658651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113518329-1	1.38174378323437	0	1.51506427944137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24712385-3	2.3875258116538	0	1.47728802127737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76202436-1	5.04333997410442	0	1.3691365257437	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32172524-1	2.53904723591837	0	1.39942699672657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108753699-1	2.63227871801234	0	1.40645593354133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115670726-1	1.09897983324356	0	1.54366781747367	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20757220-1	2.67371978964503	0	1.45785866963013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9985809-2	6.39887824089664	0.327723123436014	0.838408144010748	0.390887333069385	0.695880517331887	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63412505265868	2.4926420445116
Merged-chr18-44400601-1	1.80959803940952	0	1.48784465698559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35539208-1	3.80616698406142	1.15460015001052	0.876908475919715	1.31667121679895	0.187948855678417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	2.9462120107287
Merged-chr10-19121794-3	7.00405208638434	-1.81752279911483	0.707741119837384	-2.56806160921163	0.0102268978028336	0.204455039164189	C57BL6J_F1_Control-BALBCJ_F1_Control	4.45987284771395	2.44598318426397
Merged-chr6-143349165-3	4.20474229113718	0	1.40654462377175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81123752-4	7.49203398490091	-0.180264739120237	0.69653241238386	-0.258803087861032	0.795787175261321	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68584536307091	2.49266796147315
Merged-chr18-23763256-2	6.60373254878895	0.314360541845277	0.823069591321669	0.381936770790527	0.702508264982308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0509200531463	2.20109702178928
Merged-chr4-47322607-3	4.97240020377611	0	1.36261865632814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127593655-1	6.33816281121911	-0.209133372879823	0.688057677935321	-0.303947444504038	0.761167931131114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59112047591875	2.47481144691616
Merged-chr11-101641481-3	2.81278678831069	0	1.41053542951285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65522972-2	3.59639531045155	0	1.40025084409659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76851659-2	8.8842573204806	-0.325648991346612	0.635341346743097	-0.512557529926177	0.60826086784868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35551030710686	3.22513242564871
Merged-chr15-39362255-2	3.93901975447388	0	1.39666031012916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37749257-2	9.83490481409241	-0.350142026261732	0.528398966806056	-0.662647068328293	0.507556617501749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37095029208204	3.6306501207021
Merged-chr3-79059204-2	5.55606726372015	-2.16540964539421	1.27317269191048	-1.7007980607445	0.0889809135634572	0.845424662481718	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	0.679405493272835
Merged-chr19-46876018-3	3.70887626652151	0	1.37221062157528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59037706-1	2.10190551199647	0	1.50807571877903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83278398-2	3.4872501360579	0	1.39620718485492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85439975-1	3.55635501854632	0.640921680726893	1.04908256667399	0.610935403072108	0.541242345945534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	1.40024388691264
Merged-chr15-53723844-2	2.65890853027638	0	1.470210333619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96402045-2	5.74825161288957	0.55881004002758	0.77733659561937	0.718877823553809	0.472216201478519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4555271198677	2.4862558827308
Merged-chr12-85364626-1	4.16098493192854	0	1.40903709733256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25310404-1	2.70887027804815	-2.47344487895049	1.33375022696511	-1.85450381109116	0.0636671154214128	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0
Merged-chr10-61344221-2	2.31604468123653	0	1.51620717058452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17137031-2	7.11727941972081	-0.632187444466769	0.97882033360778	-0.645866685397333	0.518365696488909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.55500983080492	1.06702908365212
Merged-chr6-97363395-2	2.84828581174998	0	1.44510140432369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31918599-2	2.99211760148738	0	1.40271710025027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76699812-2	3.59999696224514	0	1.44742963136956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150156221-2	2.9735939133751	0	1.42673198406319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-57243824-1	2.79349354129482	0	1.38572964765958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135026382-3	6.92587053078961	0.734922670826183	0.734667033242287	1.00034796386979	0.317142143021091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25104685314663	2.79671244268192
Merged-chr6-134454140-3	11.0221274671411	-0.490748102414002	0.471485260243661	-1.04085566144822	0.297942542355868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.72938612352914	3.98900154662451
Merged-chr10-94858875-2	2.57172206159573	0	1.48070860555393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3721266-2	4.52275070983325	2.59981627219258	1.18541909376878	2.19316213637746	0.0282956994861371	0.40809921155928	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.788686275880602
Merged-chr17-32275572-2	3.98735421105852	0	1.37211704827625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30222924-2	7.46181162287882	-1.6522020744485	0.888586103369781	-1.85936069468436	0.0629760291728547	0.687826797228694	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12740825825653	1.92218463282547
Merged-chr15-103552302-3	3.80526769099228	0	1.36763682646843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8869066-3	9.61785512678938	-0.145829930191195	0.555887753717835	-0.262337008174527	0.793061632429868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85783341354092	3.21343677255833
Merged-chr4-43420534-2	3.74470106837984	0	1.3689068859591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88725597-2	2.83803510329094	0	1.51672983161996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-78736546-2	6.7734241546927	2.81850370103387	0.975288555845269	2.88991774192522	0.00385342643665794	0.102329461490127	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.93185576084276
Merged-chr19-33366816-2	3.65720075027063	0	1.39945907326232	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126301404-2	7.16395039198677	0.505498449730823	0.6943880250317	0.727976911335339	0.466627720060721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	2.61177357084289
Merged-chr8-27192432-2	2.86092710173807	0	1.41514766328624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37702552-1	1.93495980955423	0	1.45926280525295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76804080-1	2.47896462538002	0	1.42968078182668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40815284-1	3.35192979888208	0.622643924286825	1.10189850625076	0.565064677694669	0.572029772775252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	2.44710056226194
Merged-chr8-71616759-1	3.50397065731844	1.99028825668818	1.14655795551817	1.73588107527343	0.0825848646601512	0.809788814860932	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	3.44485777357286
Merged-chr5-125158330-1	1.41158508017035	-0.646256544857324	1.75352712242792	-0.368546648974852	0.712465668189166	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr18-35573549-1	2.56197030718878	0	1.45664357551024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86141864-1	2.68376680529789	0.854744593301659	0.970932007494693	0.880334139469938	0.378678323478992	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22017310661124	2.86423235599279
Merged-chr17-10315074-1	2.04280798506269	0	1.42062523203076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87248622-1	1.71570988042833	0	1.49282354765311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40986332-2	8.26906261835035	0.452312392819094	0.64145400854981	0.705136123229903	0.480725528274036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9298561631795	3.20506504841172
Merged-chr17-17617545-1	5.832850721379	-0.462831166829584	0.5810047347498	-0.796604810852177	0.425680582523822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75032554325982	3.33343161942985
Merged-chr3-106552700-1	2.50482481306872	0	1.47817688165402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80109803-1	4.54138096765211	0	1.43135526505996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82876891-1	2.87700645693309	-1.23291451646633	1.46883457264004	-0.839382827332504	0.401254517287708	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr1-105962723-1	4.31257763851438	0.8151078630819	1.05908230323276	0.76963599579924	0.441515846416705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96943141097616	2.50773587892889
Merged-chr4-139692251-1	2.6775657418312	0.795155808046671	2.07951090180939	0.38237635943856	0.702182222978487	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.25163494309627
Merged-chr16-11824257-1	2.677362556742	0	1.4108079229251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121550364-1	1.90024086523866	0	1.56621754653469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50200879-1	1.35881244927846	0	1.87483771112726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65776791-1	2.55656674157148	0.222032185053673	1.08676225806675	0.204306124366747	0.838114284358799	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	2.02640015751263
Merged-chr3-105775844-1	2.38465704676806	0	1.66822580499071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-130372249-1	2.38588573065153	0	1.4365221914849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124709491-2	3.95148356010267	0	1.36394263668074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20954189-2	3.40738314649871	0	1.507272373917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58595663-1	1.50083598871298	0	1.45500981593396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129499238-1	3.69397058758126	0.300861212811563	1.07565041787342	0.279701664976219	0.779706400829736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69017997474274	2.33494576651626
Merged-chr5-140587930-1	1.83031410408887	0	1.54131387449334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31449105-1	2.4421316275999	0	1.43879105929668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91045013-1	1.75504911186557	0	1.58803479518588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58524254-1	1.74449147289869	0	1.45545498446941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62332179-1	1.79644984977732	0	1.55582111637261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74273828-1	1.50801070685788	0	1.54615926152693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56689096-1	1.63297480645615	0	1.58523829383781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159840164-1	2.63809679820576	-0.262650932282625	1.1505505454929	-0.228282828000489	0.819426373408817	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38195934385413	1.66683653681755
Merged-chr15-5009787-1	1.15277979981598	0	1.58583160983812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-22276809-1	1.92450637362331	-1.30059512284856	2.45080004502991	-0.530681858557208	0.595639259535085	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2288065888411	1.41437199749648
Merged-chr2-5609627-1	3.70186134303446	0	1.45676140994506	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-27652576-1	2.54178209278083	0.455238859481479	1.81052734237461	0.251439925168105	0.801474003116545	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25121929154759	2.0348935737403
Merged-chr3-121618788-2	3.59586597132614	0	1.40830079610814	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-141477005-1	3.8069326613272	0	1.40912817417895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85494967-1	1.18125053178451	0	1.58276290527587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74992152-1	2.56222701911881	-0.870992114816048	1.30444905780091	-0.667708799824194	0.504319491732623	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21444166002597	0.723581231604105
Merged-chr15-89404668-1	1.54127186153889	0	1.49235218593672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130798126-1	2.09063832274006	0	1.44694214847989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23020443-2	3.08169681811967	0	1.45925780572578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145271158-2	9.64547273343451	1.77295693355427	0.685474413111815	2.58646697767414	0.00969654612415564	0.19682395472852	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95988517553914	4.68771430244702
Merged-chr5-148535083-1	3.42014919471203	0.578122572858299	0.944295478205587	0.612226348850982	0.540388010926673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	1.85784526308241
Merged-chr17-88370760-1	4.07609204562296	0.620329503202488	1.40959022193317	0.440077898917136	0.659880688457749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr5-148594877-2	5.04974071815454	-2.13053461084407	0.923138046656824	-2.3079263373012	0.0210032339133071	0.331400894478479	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90955925784111	0.724326877898254
Merged-chr14-21843453-1	3.53360053331665	-1.55828952747684	1.02757921912004	-1.51646656382489	0.129401418800442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41041824439107	0.837303648891292
Merged-chr6-91718708-1	1.58435739207945	0	1.46924604694165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30223786-1	3.09287695978202	0.748911725211038	1.41191084574886	0.53042423143497	0.595817829173349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67709642602482	2.72641927828261
Merged-chr1-97650263-2	3.03244739071086	0	1.41369877358018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80749197-1	1.98329297847172	0	1.43916149054919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122259569-3	7.40341447532481	-1.32900508714729	0.55119770517861	-2.41112231538888	0.0159035138964116	0.276639715806411	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95980234072219	2.7351935204533
Merged-chr5-143066662-2	3.01536613985577	0	1.42466797125169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67582129-2	6.66819583719444	-0.757359724746818	0.978567934703696	-0.773947007548476	0.438962129545672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	1.03838943879457
Merged-chr17-88255880-3	5.06018555964972	0	1.35724464275621	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88524195-2	5.26043926245561	-0.470361643051395	0.789134840505632	-0.596047239214548	0.551143669229462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80796006221898	2.38779495647033
Merged-chr5-127624720-3	10.1759651212879	-0.329008006962363	0.521079512252651	-0.631396935066678	0.527781019533416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17344440436088	4.11652729749672
Merged-chr6-83634809-2	3.90982749838028	1.22317299565412	1.36237691649589	0.897822754366823	0.369280051630515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr17-26616933-2	3.67056647676977	0	1.41186317814936	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104792196-2	2.90032635922372	0	1.38909978823047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62764198-2	9.76906368719048	-1.32366105235664	0.682282181721896	-1.94004927553007	0.0523737016953117	0.60898011774448	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03087501846391	2.47397336618796
Merged-chr7-141070247-2	3.70084816165496	0	1.40578422710105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11253703-3	4.36611185119987	0	1.36833522202903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28702196-2	3.06854295413268	0	1.38477543792401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107313916-2	5.48871077454482	0.11158359719878	0.970541287372864	0.114970479515429	0.908468520786356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	1.23107802440432
Merged-chr2-90539136-1	4.69908488015566	0.130627367826695	1.03559529464875	0.126137467504621	0.899623109537345	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63767395945907	2.34502298933502
Merged-chr16-57538243-1	4.53989939012832	-0.599681973114282	0.67106589736438	-0.893626058885635	0.371521998936829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05750724623645	2.22377753961315
Merged-chr15-58244320-3	3.32767721561116	0	1.3671808526298	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108733755-2	2.62074750532449	0	1.44767424996353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81243263-2	3.21868195816546	0	1.3973166656817	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26464624-1	8.80816217429998	0.847625970328703	0.547407795797113	1.54843605961882	0.12151734503656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45382264509587	4.46748591513588
Merged-chr10-93700460-1	3.23020097215347	1.98809239499472	1.16434650869131	1.70747486264143	0.0877338261551984	0.83893792473667	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.48831306804139
Merged-chr14-16302900-2	4.75746734924002	0.154322789412767	0.93758104206331	0.164596746829642	0.869261391946379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	1.6776376524744
Merged-chr4-132786231-1	2.19487391614591	0	1.45496604259412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105880460-1	2.41726456751685	0	1.40752365715516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66311423-1	2.33134009734763	0	1.41792956278604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84409423-2	3.90167028804538	0	1.37133474364233	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56776245-1	3.65269775846338	0	1.40607263840003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-88197029-2	5.68924806917955	0.19772716286779	1.43430065544533	0.137856147605537	0.890354108554643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71352082728824	3.03880884286786
Merged-chr7-80787476-1	5.60030717844363	-0.975335944507579	1.05645272342746	-0.923217786162059	0.355893721746063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	0.990331813111976
Merged-chr3-137922427-1	5.62264522245499	0.54138263815835	0.87457668610169	0.619022490264966	0.535901542944404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69442907999601	2.47481144691616
Merged-chr4-74222540-2	2.96773039449233	0	1.40171947552623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139764407-2	5.44508572894236	-0.770790275605152	0.88617054772036	-0.869799021856437	0.384410246126268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14074246228021	3.15208501877457
Merged-chr12-71320984-1	3.12940228036486	-0.869544135469113	1.23068332199806	-0.706553928152186	0.479843728399739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50201473284981	1.55081194879892
Merged-chr5-64811759-2	5.26154629306516	0	1.36009525226426	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153710896-2	3.28371263984654	0	1.37457551919737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27497847-2	3.39335718094021	0	1.41701269306681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-138274760-1	1.6521879070973	0	1.55665784373992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102636723-2	4.4755436391564	-0.839055800894932	0.983917666809597	-0.852770337599093	0.393786676275055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73775798795819	0.990919527803163
Merged-chr10-42697197-2	3.43740055917411	0	1.37060794870628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8070267-2	5.68953018010414	1.34690871454865	0.743520537081179	1.81152859588274	0.0700590666806463	0.732937029579148	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77128661274154	3.27403709716759
Merged-chr2-128179946-2	7.47660735813101	-0.0374182887859885	0.560519234219555	-0.0667564759630207	0.946775573224408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33322067991586	3.29804732329268
Merged-chr12-80154169-3	3.64682272212284	0	1.38647347189001	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102808443-3	7.0461645198293	-2.27267991343924	0.79866517019859	-2.84559787786179	0.00443281339939061	0.112810535382713	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46883776663038	1.27992882773773
Merged-chr9-48266807-1	6.37571197782673	0.696230519080228	0.799481684668024	0.870852369018722	0.383834766759593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	2.1985101063361
Merged-chr7-98671670-3	3.89053018017667	0	1.38848559057564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97408399-4	7.25830810177876	-0.747579786461468	0.577349998500351	-1.29484677994853	0.195373090728944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51409663842588	2.89338344134988
Merged-chr4-6248029-2	3.90577068184207	0	1.43177269068573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71308829-4	8.63747713506408	0.310730696461375	0.624519267469173	0.497551817289148	0.618799971720296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29376108772029	3.54452435087155
Merged-chr13-98867466-2	4.09924713188422	0	1.36900998331207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-61157716-3	3.48030188276184	0	1.4000664531043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53386368-1	2.8652485211717	-0.423720655903283	1.11989258000496	-0.378358302812764	0.705164439365235	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.17858215524007
Merged-chr10-14082538-3	3.58586559144723	0	1.37965454628025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32170921-1	3.54992636757775	-0.716465847419315	1.18030485082849	-0.607017625079156	0.543839215500246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.95685815637649	0.730937814817307
Merged-chr3-96098350-3	3.73863197597265	0	1.38498326631857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90572272-2	3.57110073470035	0	1.4139428615037	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95693830-2	2.3683650087238	0	1.4266596726485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49420660-2	3.69492960939084	0	1.3823999550949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101905923-2	7.01697998160801	-0.302480751141041	0.686119086336309	-0.440857508798081	0.659316156852646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16743567880231	2.08990416182602
Merged-chr3-109008382-3	7.74844408069234	-0.423826654637894	0.874291744276245	-0.484765705970088	0.627842551819119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07503266439455	2.43779475356491
Merged-chr14-27230897-3	4.03563111139085	0	1.39724833446054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91682971-3	3.65105861363814	0	1.40914354629136	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36751769-2	3.41756735717366	0	1.39634909958671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146560609-2	4.03913110972128	-3.03452468046373	1.27749681992252	-2.37536769809555	0.0175314760575874	0.294616639816838	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58656857412163	0
Merged-chr10-120872586-2	2.56253595465218	-1.85230565710532	1.32102164618504	-1.40217661266533	0.160862513674284	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr13-116957826-3	4.96422446945208	0	1.38557227873415	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36402064-3	3.83608224693276	0	1.40336401088916	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51384199-2	4.49137533771929	0	1.36202809480018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66568021-2	6.81944262733716	0.514880258197338	0.676495582235447	0.761099217375435	0.446597807900203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73301515794639	3.12383463284375
Merged-chr2-91975865-2	4.75483145640305	-1.20878455432966	1.15191728314153	-1.04936749540995	0.294009012337556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.55634759613363
Merged-chr1-131482455-1	2.73480633423658	0	1.42839720836259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67446961-1	0.896176546724158	0	1.72806574131564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125183673-1	1.73050531547978	-0.0352285124344526	1.47131006296837	-0.0239436358937007	0.980897567838438	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.303163067301871
Merged-chr16-25053678-1	1.35342327636104	0	1.51930423110991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83030034-1	4.86365545513607	-1.72865772455401	0.875317988833915	-1.97489112140481	0.0482805051875981	0.576555356215432	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33614760192983	0.897114879832661
Merged-chr2-104750768-1	2.55972617527404	0	1.43280041223563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50582860-2	3.88353286221925	-0.585412706120402	1.26520069347265	-0.462703434435841	0.643576956185621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	0.679405493272835
Merged-chr8-125275965-1	1.76556796977879	1.58316247949753	1.37221659273324	1.15372637809613	0.248612365871005	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.67689200618025
Merged-chr7-106589279-1	3.23713943813853	-4.63874786700481	1.38682336091915	-3.34487289277444	0.000823202873539293	0.0309036498637586	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97692878556689	0
Merged-chr10-127658322-1	2.19727761356282	0	1.50009860600759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32570635-1	1.96239383631637	0	1.6888328700761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30917364-2	3.20657272770021	0	1.40875812557972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114581566-1	2.32054039336019	2.78334561871504	1.29678858077549	2.14633723644495	0.0318460828161815	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr17-57449713-1	2.46523913548565	0	1.69791344420281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102990051-1	1.97288958869588	0	1.4371260120772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120828436-1	2.52744850510077	0	1.44058183874839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97470986-1	2.38804513261196	-0.615618191489556	1.40495119866705	-0.438177633553125	0.661257520818635	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.376242425970964
Merged-chr2-18773237-1	2.65430759324718	0	1.47068899221601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157535633-1	2.40968064906431	2.68230153766873	1.28683532169894	2.08441709085778	0.0371222445552417	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr18-65007822-1	2.8330836339409	3.44380734104038	1.17588794939158	2.92868665149791	0.00340397388994143	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.9057079005854
Merged-chr9-118718562-1	2.22765472039697	0	1.44886636507688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65435300-1	1.04771990103086	-0.671795181665396	1.57534973129336	-0.426441931160169	0.669785852751155	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr14-121369345-1	5.26666702577961	0.395999847391414	0.866440884351571	0.457041968521342	0.647640880138334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09829368205001	3.53673967778878
Merged-chr5-74809592-2	4.35395993129938	-1.17154433516067	0.876560728508166	-1.33652386772397	0.181378104557293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34779426498257	2.14165029359488
Merged-chr10-94476290-1	1.99689364507553	0	1.47401854855947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-126468025-1	1.91433401555831	0	1.48330958392209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63389499-2	4.3652993789105	0	1.38196474269267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69489210-1	3.86078407442179	-0.373695894269898	1.200406389051	-0.311307818484146	0.755566624106197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89892873258735	1.71947978671142
Merged-chr19-12456275-1	3.04375595443734	-0.901910291147125	1.9386998152851	-0.465213997564904	0.641778215720486	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38434908732392	1.17559555749776
Merged-chr7-145049831-1	3.63814672598947	0.686394122817377	1.08590517818902	0.63209397708379	0.527325470587494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.6776376524744
Merged-chr10-17406660-1	3.55588808225891	-2.75532901553889	1.04113741250894	-2.64646047912069	0.00813390090107275	0.17469408102782	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27617804945878	0.577068348605183
Merged-chr16-35628325-2	9.22112549581734	0.305661060415497	0.696867216503868	0.438621667337109	0.660935694452804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54612896583981	4.15491494886977
Merged-chr6-122593087-1	2.29225777667771	0	1.44569218060771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5596702-2	3.30288278822787	0	1.39967896482687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55486922-1	4.78050984173685	0.488348715103974	0.964695645003658	0.50622050346472	0.612701862931803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31199215555684	3.31550513539487
Merged-chr10-121266426-1	1.99801613199954	0	1.44691250300402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44655882-2	6.41249547651702	0.331357188965551	0.811593288304156	0.408279853641877	0.683068228269732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54911206455162	2.36325837532821
Merged-chr2-132131469-1	1.6271835502588	0	1.4768020420501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55970019-1	2.88273500883913	0	1.40319871591409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36983252-1	2.54305659291989	2.60831831966925	1.92324508399573	1.35620693450582	0.175033336271883	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.94927122251658
Merged-chr6-83661177-1	3.0767591838776	-1.58247318982727	1.1422253999428	-1.38542987216578	0.165921062080645	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03169262342392	0.67591700901439
Merged-chr8-31418605-1	2.03900097115256	0.916334839746675	1.38550113378276	0.661374298009308	0.508372304494786	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01927470790114	2.10378488775356
Merged-chrX-159968776-1	2.13069294429605	0	1.47076187658833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80827862-1	2.38662314042115	0	1.42018175597313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48436453-2	3.86380715622191	1.21107693348119	1.12477168917177	1.0767313448056	0.281600304797179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	1.83064801361452
Merged-chr13-47152549-3	3.51553741324841	0	1.39063520323616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125432614-2	2.43013055097058	0	1.426666895201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141473024-1	1.43855016729424	0	1.71729044382032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39170359-1	2.27902879639602	0	1.43009787468679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9171312-1	1.76505362295284	0	1.47907781141521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-70611217-1	2.05762728631409	0	1.44047621607185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137959675-2	5.54331707592333	-1.41594258186964	0.938271632899118	-1.50909665412626	0.131274084490989	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87904398499205	1.14478899401529
Merged-chr2-153263237-3	4.32704269896557	0	1.38735561911405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82201973-1	4.69288155857918	0.628424456287932	1.09462814440143	0.574098573567709	0.565901098568952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.730937814817307
Merged-chr5-43846526-3	9.70913322858329	0.0770045596661337	0.758579796479782	0.101511482408939	0.919144442999785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46414961250053	3.122871560439
Merged-chr11-5061931-2	3.51946235994788	0	1.42591888650903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11547813-2	3.85959069919361	0	1.37241432499161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80294117-2	2.46781147449094	0	1.46091568941349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19575481-1	2.20211951274741	0	1.39517814355803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105458017-1	3.96948296158359	0.988392460008184	1.13371239975076	0.871819396370255	0.383306911399096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.44790810950236
Merged-chr3-100765546-3	2.88068213890344	0	1.44742573877707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-37786904-1	2.76808032744829	0	1.43462162325523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-16538407-1	1.58622677171341	0	1.46392418424572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115778635-2	3.29855810044644	0	1.40786494262875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133203560-2	7.60894177289268	-0.682519720704557	0.627818608266311	-1.08712884855277	0.276979870050586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77070890639906	3.09556672564937
Merged-chr9-72458429-5	7.64038016195938	0.0526479986277557	0.732653830380716	0.0718593098740747	0.942713872311935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30999519426894	1.87786674940178
Merged-chr14-50897660-6	12.7779209474314	0.711268515262467	0.513930836329057	1.3839771132298	0.166365462760994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32952036599259	4.16428480988769
Merged-chr1-105996226-3	5.45496677649707	0	1.37396742216093	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29828987-3	3.79468804693612	0	1.37954783968352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170613417-3	3.97434217251677	0	1.37749432296071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92457847-3	3.92124800160816	0	1.36535091438754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37851699-1	3.77454542926186	-1.38202833255383	0.86228094184027	-1.60275875934858	0.108987925114201	0.960673685954734	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81541700028525	1.90363402565156
Merged-chr4-106301573-2	5.41775944935792	1.43905311063831	0.975676910884026	1.47492791372344	0.140231924806059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	2.15278430128798
Merged-chr7-19619679-1	2.31599528557947	0	1.43542823424914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55814328-1	5.11208041354209	0	1.51140380810583	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-14513766-2	2.29114789099358	0	1.5757220732129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83965360-2	2.40098052702451	0	1.44154040171514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53809077-2	3.47751723852707	0	1.38491838552968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55862917-2	2.52441170237078	0	1.40619719002077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24991230-2	4.19004590449035	-0.0318863208614926	0.992764409432568	-0.0321187187599904	0.974377375699214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18395292683035	2.16210496555786
Merged-chr5-108031995-3	4.09491380921119	0	1.41599536255885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17273172-1	4.92212888419235	-0.214350694818832	1.06806697827002	-0.20069031173122	0.840940735713572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79257770822194	1.68580115571326
Merged-chr17-84419851-1	2.40332178160133	0	1.44942438489793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117681577-1	2.63067749005672	1.12592898626637	1.43485097776116	0.784700992449537	0.432628900770692	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.67591700901439
Merged-chr1-132130873-1	2.36843849669608	0	1.40460173871715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-49436739-1	1.74752289616985	0	1.49183911468884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125782623-3	4.23258163576713	0	1.40967142026226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118522479-4	7.91815189445671	0.5768778006053	0.820801239381081	0.702822769907476	0.482166205258073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81518459389541	2.20147828275906
Merged-chr12-69501862-1	9.10659731260585	0.246363738438114	0.597275288211729	0.41247937642915	0.679988093911569	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46617644938846	2.58243919631441
Merged-chr2-31460419-3	4.85816400616024	0	1.37593818461353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128895627-4	4.81079383590432	0	1.36190505364865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85608247-2	3.77064529769545	0	1.39164940055723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30499222-1	1.7516498279102	0	1.43894574194145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20798706-3	8.19004037505047	0.191397891281903	0.680513994725998	0.281254893749786	0.778514903988831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41152608579808	2.61685271280055
Merged-chr11-46799036-3	4.24546375018199	0	1.3902824684072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55474829-1	2.17129746555629	0	1.40697653935209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151001589-1	2.51029169678259	0	1.40115051392999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51328000-3	5.14887765715944	0	1.35771505549282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4346445-2	3.84389018420829	0	1.38479343891742	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87363925-4	9.55297090341114	-0.422367561142792	0.572292656263223	-0.738027225267288	0.460497905153482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14168789824199	2.82847064007597
Merged-chr15-78870013-4	9.41081706394313	0.110634548749363	0.577906405027707	0.191440253623869	0.848180685386393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26883462865396	3.86066153283382
Merged-chr8-34180086-3	4.23453978060927	-0.198637010875289	0.86380537721948	-0.229955747109014	0.818126156917238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8131505516485	1.75107117680423
Merged-chr8-111555485-3	5.28171783579787	0.487763237289017	0.96227018986896	0.506888026278191	0.6122333875333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	1.32471430176536
Merged-chr9-114925624-5	12.8979777039588	1.26948584119548	0.520118566338478	2.44076240179694	0.0146562939769517	0.263070113631089	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63068143299972	5.01872475053924
Merged-chr12-39140588-1	1.51258891669813	0	1.66757099384834	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25141106-3	6.62290309451431	-1.50800895173008	0.933105217845169	-1.61611887158079	0.106068614805211	0.946451712441967	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48868985467357	0.88866493597531
Merged-chr13-91451924-1	2.25356285858105	0	1.45737555881801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127527712-1	3.26017689077736	0	1.42455993176627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43953244-2	2.27054052414594	0	1.4768249224977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44527730-1	2.55772153511614	0	1.40025673785447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95648083-2	3.06179525703287	0	1.37881274139077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-94901838-2	6.30533269821602	0.548572959568153	0.711936129350019	0.770536761589817	0.440981557145737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92027594280124	3.44768783218163
Merged-chrX-99199693-1	2.36347575667558	0	1.46793309806194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171657336-1	3.0873750831477	1.11549821668277	1.45008793667374	0.769262462276277	0.441737516538979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.18984215491549
Merged-chr11-96969232-1	2.29785792120592	0	1.44032581145674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64103830-1	2.02679961634876	0	1.4900981738145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149219329-1	1.17213670352954	0	1.51609245029852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34368217-1	1.94248648743733	-0.977140059184924	1.54642534424617	-0.631870179068517	0.527471710995858	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.376242425970964
Merged-chr7-130012267-1	1.65455532681633	0	1.48898589230963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125684075-1	1.82324282938536	0	1.64168064271747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27667645-1	3.35601552396605	0	1.39669994922405	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133591389-1	2.29261662763857	-0.873218529621871	1.25948076864312	-0.693316286649314	0.488111084382796	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4150019944704	1.00114351279961
Merged-chr3-84693036-1	1.41396469214561	0	1.5711168224955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116448860-1	1.94014933781838	0	1.44063631457855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133307534-2	6.87061345022105	-0.119120874205261	0.721290850814124	-0.165149570482988	0.86882625703873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48698724575144	2.50361789555104
Merged-chr1-132157529-2	2.47950866502957	0	1.43535887032398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44247172-1	2.01501303235236	0	1.42217498061969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132707921-1	2.2391935484247	0	1.44703342128429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57746882-1	1.01780827798686	0	1.83254745378206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82744705-1	2.26377702796721	0	1.40518183358471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140166423-1	4.62002763597491	-2.67993623111835	1.16649158384259	-2.29743297614738	0.0215940824198169	0.338280324570267	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11803093432882	1.20253745507858
Merged-chr4-81744670-1	2.6608889864917	-1.21100736460538	1.19247858727054	-1.01553803777496	0.309849424145089	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.601513806634888
Merged-chr5-143059507-2	3.21566269454315	0	1.38985403735194	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-65131845-1	2.2621219189369	2.88041387303173	1.94689631215101	1.47949012746823	0.139009368006167	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	2.71171030582014
Merged-chr10-127744746-2	4.96584539216923	0	1.37268089335202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144522889-1	1.80774928879256	0	1.50494102077844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122903961-1	2.3013924427745	0	1.47712107894731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60601861-1	2.83804357365331	0	1.42175895482589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-85592883-2	2.66820463281752	0	1.39346680769605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57914788-1	1.25548254610371	0	1.75127902216505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137313716-1	3.04436963279771	0.925613099051611	0.877546473055746	1.054773880896	0.291528752907896	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	2.781237761187
Merged-chr5-129063558-1	1.58159499062277	0	1.48766291670733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95670666-2	2.94990975888512	0	1.41100919545806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141363320-1	2.96493446488617	0	1.40913423459906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53881179-1	1.91686337591681	0	1.44776301091279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126958430-1	1.60492883785633	0	1.65711682553458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-18556864-1	3.54378350606178	-1.00048499278773	1.00331481030319	-0.997179531801584	0.318677374214268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39033320492822	2.60219362730004
Merged-chr12-36051741-1	1.08470921279963	0	1.53717475351722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62560700-1	2.31284402559094	0	1.4471703115388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-16221381-1	2.44130223993869	1.66469100816006	1.37192606084272	1.21339703040374	0.224978061140094	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr1-184771200-1	0.853113835927962	0	1.62770423597363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8838247-1	1.72055181797003	0	1.52517555785305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-71723173-1	2.0296901442652	0	1.44223598974232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89079969-1	2.19370052741791	0	1.52094395380216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29820665-1	1.3602524942083	0	1.65345935733351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174344856-1	1.68257142102544	0	1.58114726362747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32464856-1	3.02457747159906	0	1.42035174258071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141016200-2	4.24496853375388	0	1.36281250191021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11195228-1	1.04470454667679	0	1.85115688769145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-69949180-3	6.33358273372614	0.872224363430025	0.732016589550086	1.19153633385019	0.233443101741291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	2.46148502957325
Merged-chr8-124349886-5	10.9408009435233	0.487029851878491	0.473161911926309	1.02930907920235	0.303334458227237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.36494601512464	4.83721961430824
Merged-chr16-93938699-5	9.27612604962413	-0.697548511045084	0.58991544805033	-1.18245506767195	0.237025184063755	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2168041384613	2.21180211172111
Merged-chr8-94950257-3	4.01505985827266	0	1.40792130044886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16264118-2	9.42627186602223	2.88864807467039	0.843976464825734	3.42266425079383	0.000620106203809176	0.0251742741843637	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77802408088656	4.69656555288056
Merged-chr5-102027326-3	10.883044497078	-0.660483223684588	0.674274728744695	-0.979546163496617	0.327310190785536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58248076098488	3.04757318255285
Merged-chr8-14931568-1	3.09775848619439	0	1.3742342682618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42487033-3	3.34759587162087	0	1.40598569644579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116338562-1	2.10126802964161	0	1.39389210895027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86329441-1	3.73345154153807	1.55625973890623	1.20253283716581	1.29415155312856	0.195613077251768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.93326672119522
Merged-chr19-23057486-1	4.14327992511341	1.08472243972375	0.970444191075864	1.11775870235381	0.263670063817255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.02497645810754
Merged-chrY-90738965-2	3.49396468936201	0	1.40112156223231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44219262-2	2.70215900364938	0	1.38616069940026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-15974876-2	2.85575035813773	0	1.41601172652639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119436036-1	1.97355250795258	0	1.46783238102748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53628101-2	3.78974857343386	0	1.37216632297294	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64512837-2	6.64490777692867	-1.15033204411154	0.68103358894009	-1.68909737022198	0.0912007717429357	0.858158689834558	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60182586066279	2.23869582718247
Merged-chr5-117419070-2	3.24904039774474	-0.575278213576396	1.29519535880611	-0.444163275960684	0.656924541241049	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.601513806634888
Merged-chr17-35215219-2	2.67120891936226	0	1.43397927923605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43209819-2	4.58616034831912	0.618417752500065	0.89358509321358	0.692063640269628	0.488897364110473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60033597541029	2.8310297832272
Merged-chr1-162773815-2	3.47482914057025	-1.35388121483457	1.41202051900921	-0.958825453743804	0.337646684032264	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr11-61751816-1	2.87595311688883	0	1.40047125239912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59526901-2	2.054959164385	0	1.59663267832091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99340632-1	3.39651608606816	0	1.38355793431297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7059143-1	1.93476049301797	1.21459044908555	1.47008951916183	0.826201692654779	0.408689688227739	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.724326877898254
Merged-chr17-7863942-1	2.55976783573869	0	1.41917574368533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58535976-1	2.40999038450602	0	1.562985835867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71263818-2	6.49468075006953	-1.28880687460691	0.895875741346628	-1.43860003695339	0.150263875890802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98612241891333	2.26908310412671
Merged-chr16-28593333-1	2.13096131330968	0	1.43887506131015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12483803-1	1.97344189234269	0	1.46029967387768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52062110-2	3.16969102080788	0	1.39108965294903	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111469686-3	3.65244790409984	0	1.36826004424015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29432814-1	4.23373754967128	1.96546993964292	0.978389910825193	2.00888206010342	0.0445496429029118	0.546036987273818	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.94680709874643
Merged-chr6-99300473-2	2.53230203735116	0	1.4807046906398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8868290-2	2.74209223943241	0	1.40690743245479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65882975-2	2.40695577104374	0	1.42450271215178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37057831-1	4.95080049862852	1.56590552225507	0.755037286665536	2.07394462486821	0.0380844539736517	0.492560750310191	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	3.17230311583558
Merged-chr13-69524623-1	4.2581382392534	-0.132759218798129	1.00343249905072	-0.132305081730683	0.894742988072804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92027594280124	2.14954916965111
Merged-chr4-136016046-1	3.02965846083049	-0.0334813098416962	1.34336151117777	-0.0249235291938221	0.980115959479201	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr2-167605392-3	3.40912262813444	0	1.39130205327774	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131238644-1	2.54510001507844	0	1.39400532506907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155949383-1	6.60639508983834	0.318246810931986	0.739851300890322	0.430149694335895	0.667086752964121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3878400012132	2.77396950618383
Merged-chr15-84916775-3	3.62090634348239	0	1.40347937767003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-111997497-3	6.94117591633433	1.63342586250126	0.965669943984842	1.69149497991096	0.090742305772522	0.855770471805781	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	2.04608241644152
Merged-chr2-145810855-2	2.93577742920237	0	1.38357952889771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107120211-2	5.52357578332944	0	1.37376815094734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13913901-3	3.7049780043379	0	1.3856478614552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9885950-1	4.4160103905571	1.3686757743309	1.00474289449977	1.36221493261948	0.173130064593262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.76644250848645
Merged-chr2-32834666-3	3.98985310979468	0	1.38619748334546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32962960-2	2.69451081564287	0	1.4443807709448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24923645-2	3.46864610407751	0	1.3957387942904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62426741-2	3.56551258098268	0	1.38949363783996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19108410-2	6.87090886012662	0.00446011379144713	0.69313052977829	0.00643473862401326	0.994865856829726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30219722357347	2.28918762047504
Merged-chr11-107512088-2	3.47512556967657	-0.693418281812846	1.39178162471636	-0.498223478093528	0.618326536053479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chrX-140493834-1	1.65688210965999	0	1.47845935927214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-43363026-1	1.37548354474991	0	1.51981961695906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69413412-1	2.34425936346	-0.781288246530378	1.5729444182552	-0.496704293847223	0.619397594033991	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.465515277017237
Merged-chrX-103566606-1	2.35537284304206	0	1.47192145580184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43578738-1	1.63085858702265	0	1.46261454056979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5178815-2	4.34813959580224	0	1.42255573090619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-23813716-1	2.29549535989082	-0.283331817163205	1.39653781181592	-0.202881593871625	0.839227581064708	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48698724575144	1.81769545692961
Merged-chr16-55802649-1	1.87102771853527	0	1.42493634955941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116427655-1	4.28255503666113	0.415383335076927	0.796226510792883	0.521689907892276	0.601886252522104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43080472771627	2.22017358685111
Merged-chr1-36086795-1	2.28421380853963	0	1.41057262306389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109098484-1	1.66197272077672	-1.72997540993654	1.52009053311377	-1.13807393194722	0.255089612187667	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0
Merged-chr6-143221296-1	2.55340077300406	0	1.41787360646536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127349278-1	3.98556867463255	1.1160051700801	1.00772258126926	1.10745277601546	0.268098218898608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.5682414637086
Merged-chr8-36820722-3	7.49655898684223	1.08161454654413	0.850411846974211	1.27187144722	0.203418798236947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56805956097596	4.25421622951332
Merged-chr2-103063099-1	2.18992686362755	0	1.42373797113006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24361122-1	2.14873349581286	0	1.40215243710426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3921734-3	3.14488979236097	0	1.39099149430801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38207971-1	2.11743581831742	0	1.46201627364362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113148545-1	5.48886653594229	-0.602820572011668	0.774406579193334	-0.77842904258329	0.436316122888542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39292586342759	2.75026362956382
Merged-chr4-35059067-1	1.13991430626315	0	1.93557933293283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3664659-1	2.09588734301322	-2.83326932096589	1.32146451965186	-2.1440373758293	0.0320298921424718	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	0
Merged-chr5-140752820-1	1.57461151204204	0	1.56631399726823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32762065-1	3.82421341290313	-0.539062189392907	1.06225508950347	-0.507469622616616	0.611825345542634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	1.02186287315087
Merged-chr13-45915174-1	1.46321466033382	0	1.53656005281664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-12943686-1	1.86390876416734	0	1.44365082600354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59627132-1	1.81117065684264	1.28353097856764	1.45802164029584	0.880323681826287	0.37868398703697	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr12-38622111-1	1.58044205806431	0	1.62740745773411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93552349-1	1.86060388444547	0	1.43476992450161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106535608-1	2.11719617642947	0	1.41068645700561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71476222-1	5.67062466008515	-0.173437658262614	0.689508489881865	-0.251538104037457	0.801398106181869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43795514163182	2.05397862280431
Merged-chr11-98942950-1	2.63680350348443	0	1.42729036432486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95667802-1	1.78533696532482	0	1.53503008435526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31062699-2	4.73202563782307	0	1.41048976265193	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82689631-1	2.3541708922812	-0.215253105808689	1.18356216372237	-0.181868863678192	0.855685640137285	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	1.30064958020929
Merged-chr8-126915225-1	1.07781812556879	0	1.62806000596544	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91884347-2	2.57490182616233	0	1.45180200984706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159677525-4	5.73332110652278	0	1.41332453318147	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-114140901-2	1.66422590786244	0	1.64742011076273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36837308-2	4.51729932220953	2.86524389541897	0.982078180061934	2.91753136724642	0.00352814160762322	0.0960852954152258	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	3.38752991030882
Merged-chr17-7176660-1	1.61870965510748	0	1.54289595216228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12085100-1	2.33483783743721	0	1.43807427169602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51427954-2	3.7669552943874	0	1.36848105622549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-54038818-2	2.72475706747137	0	1.45006188728316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99386939-1	2.07444804104219	0	1.47723434585629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174487927-1	1.73947636039566	2.51463702340651	1.41717957340732	1.77439547576923	0.0759977576929851	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.27743081564928
Merged-chr16-91354366-1	6.17477952138572	0	1.37074146344569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86039013-1	2.49590054237477	0.619053445739069	1.42258390923834	0.435161287653334	0.663445359960386	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr17-80731642-1	2.13276333088963	0	1.4543571999695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57755418-1	2.05734053095841	0	1.49087570543344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68381962-1	2.03156172714301	0	1.47475506870283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-84538986-1	2.97172641759297	4.17325637760423	1.44131594018779	2.89544870853263	0.00378616898683941	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.37863208365498
Merged-chr19-45944507-1	2.40448780293653	0	1.40926115882834	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49411276-1	4.23991055104123	-1.88170908804714	1.31655781623562	-1.42926430183479	0.152928282233535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr1-133039669-4	9.18525273769417	0.764387492656136	0.773139214111325	0.988680277373786	0.322819595359592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8526469837404	2.953629798424
Merged-chr17-78248623-6	6.99806081885019	0	1.36819773462975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165968390-3	8.76995481164636	-1.43814246679652	0.579068138184309	-2.48354618733794	0.0130081464102956	0.241995150827261	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05890426605077	2.57403916379795
Merged-chr10-93998447-2	3.80636887482437	-0.902718726574209	1.09168184890309	-0.826906417360743	0.408290105797901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7864504728774	1.38572824442771
Merged-chr2-154215410-2	3.38809554879741	0	1.39330679886557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85844775-2	4.65279218840039	0	1.36707055653421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73069100-4	10.1988912766924	0.752178149832254	0.576207069026003	1.30539556049478	0.191758189312414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9932951841234	4.57571668308944
Merged-chr15-64031883-3	2.84803880088458	0	1.44711372123083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58462436-3	5.00422537880759	0	1.38177901926699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135487093-2	2.97819300961626	0	1.40825492244048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-89159478-2	3.1302305643178	0	1.40415147934045	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64919034-2	4.23937864387193	0	1.39858891273272	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53027305-2	2.82551537802327	0	1.51607264765276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181125340-2	2.85741183870312	0	1.40068544171543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97297342-2	3.33476000816876	0	1.40664494954637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71283659-1	3.76063916232762	0	1.38473585244953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120469135-1	6.615978614942	-0.0405830410835237	0.836612462360862	-0.0485087694833055	0.961310775634027	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20505907921057	1.66382599071749
Merged-chr18-15265705-3	4.21949445993704	0	1.42324039694509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102806060-1	2.53407491779047	0	1.45887597649163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116007900-1	3.90498574504601	0	1.38310205567886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32391545-1	4.07274580819367	0	1.38936681722186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51065555-2	9.33314272207175	1.17098884729832	0.639486726514443	1.83113862844481	0.067079854153293	0.713999176017007	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40525971832851	4.04030894049322
Merged-chr2-6096529-2	3.43523473044971	0	1.40931582979652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50063649-2	8.11294764518822	-0.534052215517661	0.555300241480494	-0.961735968444417	0.33618224971487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62344383809729	2.6679559536281
Merged-chr13-44292594-6	6.82181079188699	0	1.37415366616377	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31165155-2	3.19887012923124	0	1.3979714645023	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99544703-2	3.76934633274519	0	1.44114476701654	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34562677-3	3.89611438036261	0	1.37233167018538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99267744-1	2.7205093843265	0	1.39670213162649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134828040-1	2.44517188074278	0	1.4252666536574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119141446-2	4.89833560391371	-0.603384760090869	1.04706173539107	-0.576264741319676	0.564436251070559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.02748994520012
Merged-chr5-24918655-1	2.02712798020157	0	1.50625735754556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72902383-1	3.80275215207839	-0.55009390008293	0.945567948922372	-0.581760306818618	0.56072814388653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4873962880981	1.7793972549831
Merged-chr1-33904364-2	2.86423908054001	0	1.39223234318438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80220570-2	3.02508551507549	-3.09389528515513	1.29302650149455	-2.39275473594629	0.0167224153484962	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84001395625789	0
Merged-chr13-19830735-1	1.57846998536336	0	1.51617577193812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40608556-2	3.58495032571411	2.52085347878653	1.25682816239368	2.00572644233677	0.0448854424134887	0.548544911006033	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.956353103033036
Merged-chr17-8857162-2	3.22566953431856	0	1.41745065409378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46374595-2	3.62052387376412	0	1.38091053740876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21137416-2	3.42371025176161	0	1.41669773361568	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-53804461-2	7.53270123533928	1.26214175534313	0.667333636549526	1.89132045234386	0.0585815801386455	0.65599292844157	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74371842151223	3.88042107811576
Merged-chr1-13297386-2	3.52059758444312	-2.166521046189	1.33812491593009	-1.61907234548661	0.105431698148222	0.942744593298168	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0
Merged-chr4-141646808-1	2.35903258224515	0	1.47082596861633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-112042871-1	2.45855964774613	0	1.50070407439205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144605985-2	2.78841447152657	0	1.4015309558359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90547990-1	3.49497722775058	-0.034135883899171	1.03202087327501	-0.0330767378675632	0.97361339308988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.14143228603163
Merged-chr15-100612084-5	7.99419252454512	-0.657521296492185	1.0202235388369	-0.644487478932104	0.519259374420681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38660038197036	0.723581231604105
Merged-chr16-85143687-3	9.12870766791019	-1.53095061696985	0.595437104087628	-2.57113741562291	0.0101365097208479	0.20339997486732	C57BL6J_F1_Control-BALBCJ_F1_Control	4.460970497391	3.04457482495041
Merged-chr2-68349739-2	3.38345817844305	0	1.39723165885468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-144907983-2	5.45552156309963	-0.347661712153867	0.723472602580687	-0.480545788345998	0.63083935286164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55458865574395	2.37778321020527
Merged-chr10-40087827-2	3.82256276498236	0	1.36721667785183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117804769-1	4.45310955973138	-0.675881699949786	0.926821768654927	-0.729246682380665	0.465850780218284	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.25298535761957
Merged-chr11-46488380-1	2.72202703027217	0	1.3928917127601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22326186-3	5.77587663392475	0	1.36875260697148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32204928-3	2.99130060085578	0	1.39752814729597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24163419-3	3.39253759881017	0	1.42276379845828	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77840636-2	5.38334570205634	2.74001932801002	1.1125179653512	2.46289894936218	0.0137818752160348	0.252245439349642	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.48277945626824
Merged-chr14-77841611-4	8.34480046034036	2.41763386210513	0.747064825757419	3.23617680654953	0.00121142323176727	0.0418106383845316	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	4.40432111673033
Merged-chr2-152692095-4	9.0451768599443	0.51098684945252	0.705729669236717	0.724054651131755	0.469032183934286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43232321664974	3.20740942939927
Merged-chr5-139750746-4	10.1123475924609	0.0321042179666273	0.539115768399327	0.0595497662068891	0.952514228074795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93913832257743	3.68636878201897
Merged-chr3-65952104-3	8.4955635607918	-0.866319418010093	0.647975076369495	-1.33696410495285	0.181234353914774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09500249642226	2.70089346712193
Merged-chr7-112213091-2	6.09934699490046	0.468441540317357	0.777557270488023	0.602452781418076	0.546872785154364	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4644468692424	3.11190332828349
Merged-chr12-16864660-2	3.13361312388508	0	1.43628857841763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106138873-2	2.78108937721849	0	1.37875744422033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174434330-2	7.59974849993267	-3.42722838822846	0.835792879774175	-4.10057141089127	4.1213123065132e-05	0.00281799264993398	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37653359823613	1.28091929990772
Merged-chr1-167269456-2	2.93565793859072	0	1.41860636235379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70914573-2	8.33582811534404	-0.469138253569211	0.587392555116253	-0.798679263948727	0.424476413498842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4031241794979	2.83674188995796
Merged-chr3-81063940-2	8.70093750897538	-1.00464184924995	0.686869089131816	-1.46263948275761	0.143566053555895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97715045765267	2.37596714242905
Merged-chr11-70872369-3	6.52111336360098	-0.393552061242992	0.828767970535761	-0.474863985137575	0.63488392301383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8499596259337	1.66683653681755
Merged-chr8-84069955-2	4.97108325387837	-0.581203471606548	0.847960875326914	-0.685413075671064	0.493083295229803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94559955552748	1.28728541095094
Merged-chr8-91059997-1	3.49488705822983	3.49771921360664	1.20048059144031	2.91359913566795	0.00357288373422241	0.0970606631227366	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.1304360554358
Merged-chr5-64651683-1	2.74051017667026	1.83815554757655	1.3551401799344	1.35643203175153	0.174961747382127	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr10-6418346-1	1.43871408237211	0	2.12917999195074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128609479-1	2.18709527320222	-0.87410209343081	1.42678199430584	-0.612638859278623	0.540115157901673	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13763127686901	2.07569703507273
Merged-chr13-45929924-1	6.26897647533693	0.0444839997206341	0.809948248949596	0.0549220271521352	0.956200583232425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.229184603865	3.26074839329169
Merged-chr19-40649170-1	5.21334226162948	-1.36970420848108	0.902142438221245	-1.518279320926	0.12894399847015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21204401084942	2.28092349724659
Merged-chr15-73643332-1	1.98753437613308	0	1.50871001194085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-66814364-1	2.03846052353234	0	1.5285250899995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70231973-2	3.26621288213039	0	1.40433744837614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59493695-1	2.25583242716729	0	1.49831385496175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12466881-1	5.33328885858646	0.269447857088079	0.972058274258173	0.277193110972393	0.781631829106812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72942046393685	1.90572319298525
Merged-chr12-29573969-1	3.75867708121552	1.52975913584537	0.970558097992253	1.5761644140726	0.114987917306471	0.990276964014969	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7953101035406	4.07015653682872
Merged-chrX-20946210-2	3.78188754258561	0	1.39250614750725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44654394-1	1.78760906948265	0	1.60879554999471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61430521-1	2.60132933875975	0	1.42122614887216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-37440699-1	2.08229698967163	0	1.43295577511557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-20232622-1	3.75865231729277	0	1.48308740042566	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121872471-1	2.42984665201865	0	1.48969953492014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114583983-1	3.84885174507452	-0.543059831162862	1.14399834421223	-0.474703336687797	0.634998439330902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	0.723581231604105
Merged-chr1-131005781-1	2.04631246196446	0	1.69012378460275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56133464-2	4.12435980001267	0	1.38205554778795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-175660097-1	1.3519078248571	0.930913733635704	1.54033217229496	0.604359079411244	0.545604935435886	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.577068348605183
Merged-chr12-5305686-1	4.9367233011132	-2.99005148538698	1.16760638686211	-2.56083858313125	0.0104419859412827	0.206731067666743	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	0
Merged-chrX-143052795-1	2.36799003239685	0	1.50254462287849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54936715-1	2.76335565742	0	1.45249610970672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43385840-1	3.05120881997912	0	1.4255396698917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94546137-1	1.26555004724298	0	1.70948425920937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76348540-1	3.8341067410547	1.56245481597389	1.07487138028842	1.45362026064424	0.14605161655552	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	2.71517813598109
Merged-chr11-68451566-1	3.00338848351595	0	1.4310161051976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116985759-2	3.12611218649623	-0.0354501406583677	1.43345553436153	-0.0247305478325545	0.980269888880686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.376242425970964
Merged-chr19-46619068-1	3.25706366684204	0	1.46069952377948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106882517-1	3.71002094723361	1.38383632733065	1.01883523518536	1.35825330685475	0.174383320964313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72011176107421	3.23193634817316
Merged-chr2-132601207-1	2.15890586015845	0	1.43281416637436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47219871-1	4.60380040951128	2.6162434994803	1.23880796374083	2.11190400454	0.0346946838481268	0.466016387274604	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.95720824132453
Merged-chr7-119861803-1	1.18766431858	0	1.6790974027723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79663970-1	1.6264445768395	0	1.49096640382506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101868926-2	6.38501065006414	-0.410027780934953	1.10045446778467	-0.372598588072783	0.709447223845872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	0.724326877898254
Merged-chr10-117930066-1	2.88545599143903	0	1.43623400709785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131505076-1	1.55801133765366	0	1.70823293479903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6212770-1	2.43530526351242	0	1.49647930018599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75853413-1	5.02040187743031	0.178224911824136	0.804756737032726	0.221464330303442	0.824730907339159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11066895928297	2.20003895068459
Merged-chr3-48415414-1	2.76721516851478	1.35564195365074	1.39902928722798	0.968987544454338	0.332551403770303	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41442007350706	2.3223352470366
Merged-chr1-118759716-1	4.64836083031406	2.1434620014564	0.949207478447216	2.25815962276534	0.0239357095621085	0.363543234447235	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.9462120107287
Merged-chr1-182375336-1	2.94907259033995	0	1.40199067238821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31370254-1	1.43328846532993	0	1.52558126264882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101556723-1	2.96984728993646	1.78889509895679	1.3249929409369	1.35011670152134	0.176978551866941	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.43443730867947
Merged-chr17-66854620-1	2.96539688092185	-1.06835431489171	1.2577385153077	-0.849424822321152	0.395644945814335	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	0.97908007631626
Merged-chr15-100131882-1	1.96819833393689	0	1.53470156698883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101072688-1	1.42847493043381	0	1.66894215142427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105143172-1	2.41385305426442	0	1.52071121073876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59593148-1	2.0500636353493	0	1.50094662599691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56370812-1	2.42389746346931	0	1.47076515626013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33154937-1	1.92460977628903	0	1.46317903784306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148115697-3	3.63531936730011	0	1.37952789488473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64597710-2	4.0895198241879	0	1.3693086525289	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102609795-2	6.31881018483939	0.0963202769418838	0.739453203246668	0.130258786518169	0.89636168578976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39939947646286	2.5499341434109
Merged-chr15-81155413-1	2.56579420425243	0	1.3988589461988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103374258-3	4.54242159023145	-0.0349210568371294	1.30626812061489	-0.0267334525630858	0.978672331373978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.600815099743027
Merged-chr17-84094531-1	2.52685255503221	0	1.39350161880143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10834309-1	2.00788587615922	0	1.48771993389812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-99206380-3	3.14303485336229	0	1.41571039603011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89953606-5	11.1770580236622	-0.26908923465455	0.471281389212156	-0.570973606881418	0.568017533864942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75704489795243	3.46175301797344
Merged-chr2-156402235-2	5.68905175938755	-0.320305096070446	0.945953011187087	-0.338605715381667	0.734906776452691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82793376242699	2.01397884452936
Merged-chr3-27281210-2	2.58778028952526	0	1.43389341399994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5989703-2	11.2464382546635	-1.02039193083617	0.784114515750262	-1.30133023983089	0.193145440640762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23836617526991	1.30064958020929
Merged-chr16-84581331-2	7.39634978153918	1.41938299292748	0.687309343350649	2.06512977985714	0.0389107223837575	0.498620452159046	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45327344926554	3.53423304004305
Merged-chr13-31179617-1	3.76847928820548	-0.697787949788598	1.29042241512704	-0.540743822804646	0.588684168499312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.67591700901439
Merged-chr4-138001947-3	7.80675066880306	1.56511170175963	0.664220603863877	2.35631308733141	0.0184573537986708	0.304129522625628	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47843137798393	4.53805085571134
Merged-chr8-124844696-2	4.91204018116243	-1.35029324752473	0.852564052416477	-1.58380269927814	0.113238624853325	0.982057818826087	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21353883069526	0.788686275880602
Merged-chr1-166153560-2	4.48197645637184	0	1.38701339419837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-70805491-3	3.94475375656076	0	1.38382271853362	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83006261-1	1.33408667761313	0	1.46946172371304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-9990367-2	2.63978670291961	0	1.40678206173619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44717053-2	2.83774093255851	0	1.44062900837018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100360524-1	4.50331607644416	1.65050133315904	1.00520932492417	1.64194789307545	0.100600803231563	0.914568684470888	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.61881475415901
Merged-chr19-45064084-2	6.27897447531479	0.0578081452429133	0.649735380170638	0.0889718291587127	0.929104298384087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34001935796286	2.29430509453081
Merged-chr16-91411380-2	2.35095950970202	0	1.48312892456194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99163504-2	6.52928600613877	0.341675745875453	0.92078202246314	0.371071260667592	0.710584455996447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31832073710679	3.68538197712053
Merged-chr1-171843721-2	8.9109173197398	0.0947035996064001	0.566923467092236	0.167048296822386	0.867332047415231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96637134291957	4.29008771090148
Merged-chr5-21586963-1	2.47103563517775	0	1.41500984519309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24575910-1	2.95376340191818	0	1.389962761101	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32999398-2	5.77446952705817	0.361082268542088	0.801203273527723	0.450674979087681	0.652223818199605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88906532169278	1.99631334303834
Merged-chr17-34251806-3	6.47968006273934	0.0861697574297517	0.716471637129159	0.120269600308292	0.904269584721625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32431194912896	2.85708847928648
Merged-chr14-31401522-4	4.49854929209854	0	1.40002028334671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122523450-1	4.87335055115051	0.341797945283121	0.887060409056542	0.385315297350098	0.700003829231294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	2.17884592431967
Merged-chr7-101427897-3	4.24658697587986	0	1.37209215787137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46497111-1	2.54291941624131	0	1.41458154847584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53354100-1	3.30218943464746	0	1.41190740513885	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6519608-2	3.153112452208	0	1.38067310036968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32057666-2	3.65299530912755	-2.20077747072901	1.24635224554639	-1.76577486709161	0.0774336266200654	0.778619036152448	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr3-123515823-5	11.9786053387229	-0.752354988044281	0.461536772573739	-1.63010843935318	0.103078580384998	0.929228615447451	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34740322173668	3.75911459073822
Merged-chr11-32321373-3	3.0189236305255	0	1.40187146831926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120381619-4	4.50518980347703	0	1.39015064310494	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141048984-3	3.55647714923503	0	1.36496788144698	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118269112-4	7.27105750469831	0.391838644642811	0.721384572331074	0.54317580340903	0.587008764645967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08775141619277	2.73763099658002
Merged-chr6-134923768-3	5.81023215249699	1.04472665760788	0.763486182467112	1.36836354291571	0.17119830992355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.035112151504	3.32545285852167
Merged-chr13-56592122-1	2.71860434017267	0	1.43905684968013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37406699-1	1.46445978741707	0	1.50718014089996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17240884-1	1.56382212994631	0	1.65494085090484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184631501-1	1.26920067187123	0	1.55890277262866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14986116-1	1.8492382540049	-1.75248400505392	1.22091567902011	-1.43538496160557	0.151177428949745	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60944671944975	1.14478899401529
Merged-chr14-120531643-1	2.7794672669906	-0.0355884200051546	1.40904440134802	-0.0252571316923068	0.979849866966534	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.413263464506793
Merged-chr7-90135639-1	2.96457022886628	0	1.49122945970217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42831898-1	4.58974863481592	1.72128926058076	0.964511581661103	1.78462269744477	0.0743225372701096	0.759559842727183	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.47481144691616
Merged-chr11-50255040-1	2.4470745633027	0	1.42120371513361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44493076-2	3.27235882726476	0	1.40469221853855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36474519-1	4.19902573427345	1.6796247285662	1.31526347115614	1.27702529979775	0.201593315403709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr4-3683876-1	3.610454994978	-0.556127650262458	1.04381374104782	-0.53278437367973	0.594182852063715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	1.21849460895724
Merged-chr10-70225974-1	1.243627541925	0	1.60023657385055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60746376-1	1.59302302202416	0	1.44403408329518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46143596-2	3.29150466138091	0	1.40046011965439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97800304-2	8.2117872873028	0.152324659329087	0.706404871708336	0.215633647826794	0.8292733255898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28309010882377	2.68396495039371
Merged-chr6-83651268-1	3.54262483022599	-1.04156256559441	1.03229531883325	-1.00897732130728	0.312985510696223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31205403547308	1.40024388691264
Merged-chr14-60290193-2	2.21938836445122	-0.690379254805471	1.41984490112141	-0.486235682686329	0.626800074750605	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr2-148488125-1	2.06098067545991	0	1.43115176429296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25484664-1	5.4908066150907	0	1.37281742795482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132602816-3	4.47746416795104	0	1.39912791213688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150048742-3	10.8019679439817	0.134904754690416	0.539318671581974	0.250139225283452	0.802479682551914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69625503565829	3.44906342121431
Merged-chr8-120685342-1	1.98964793269183	0	1.47670734808142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85736439-1	2.29742332232114	0	1.45082032918298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7175402-1	2.08547308388572	0	1.59479013996349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40316651-1	2.17382815369379	0	1.45374896481483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143073225-2	3.31626413447937	0	1.38893549158737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135969575-1	2.97511174298069	0.683270996399497	1.52218119989562	0.448876254973027	0.653520926075608	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	1.64773888520721
Merged-chr8-92885121-1	2.60809232455975	2.37415088716446	1.48316438314241	1.60073348183719	0.109435962021021	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	3.01878151928475
Merged-chr10-36978526-2	3.56310756505208	0	1.39679613423274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23866109-1	1.65728118544554	0	1.62357499714164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78044837-1	2.73705422471741	0	1.45741245976167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14885320-1	1.71377271629282	0	1.55426456970014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54706295-1	4.52168487235612	-0.958681368869721	0.79909316369911	-1.19971163866783	0.230251351319517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12575163045538	2.58242819863325
Merged-chr3-19369203-1	2.77324537299791	-0.699509579020632	1.3583682695577	-0.514963132382647	0.606578783001025	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.465515277017237
Merged-chr9-45313593-1	1.60041296161523	0	1.45006091834742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-57550647-1	1.80704780841403	0	1.49054553978475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44831396-3	4.11717351603044	0	1.38585266782638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24352948-1	1.95846734153382	0	1.51836022995526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11462085-1	2.80534100656041	0	1.42910287386005	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164939482-1	5.08592038236588	-2.98768583386129	1.1750301427117	-2.54264612052113	0.0110016589936218	0.214421864730501	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	0
Merged-chr11-103248945-1	1.68817563749522	0	1.49055312973192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30192886-1	2.4524968801456	0	1.4769890353881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-122858096-2	5.5254732484454	-0.709279565432477	0.880311676721064	-0.805714139876415	0.42040769456366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	1.17858215524007
Merged-chr6-3456095-1	1.37635028209485	0	1.60985155761165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41434829-1	2.50476276512003	-2.24616968678961	1.4354316358752	-1.56480436312809	0.117628788401063	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chr17-83397867-2	4.84576061249854	0	1.38381383590115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55621533-1	2.28858837317776	-0.89645353531108	1.44117912961113	-0.622027836021306	0.533923564572937	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.06702908365212
Merged-chr5-102640025-2	2.6253984866089	0	1.41017833490231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17772943-1	4.98444712554221	0.623332232909367	0.90394980784571	0.689565092551865	0.490467725719622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50243936158991	1.86575916392988
Merged-chr9-116138706-1	2.04220934949241	0	1.42993240854096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-118448445-1	1.69131643421597	0	1.52940905003001	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46867008-1	3.49864514500553	-2.67224664602881	1.167150451298	-2.28954771259949	0.0220475490241288	0.343503215076703	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69684040564681	0.67591700901439
Merged-chr5-74885622-1	1.74989138076641	-0.396207353589735	1.597823420315	-0.247966920845124	0.804160000959118	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.577068348605183
Merged-chr5-115544752-1	4.40839199629992	0.624078795748155	0.908760970022214	0.686735914431822	0.492249160625723	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57403368136583	1.88925557974982
Merged-chr1-87607880-3	4.44911715269733	0	1.37286354262358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-97431634-2	3.42123689668109	0	1.38806091709403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58389535-2	3.79119344434713	0	1.38269746925118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76496421-1	3.3062230186088	0	1.37328761160031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151245416-2	3.69069953689926	0	1.39708779642789	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-139874644-2	3.87716685922497	0	1.44274439823846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37224788-1	2.41302297367532	0	1.45892058865789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-89359799-3	3.68796587404413	0	1.38120332037089	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141766049-1	6.16105183576054	-0.423350259012226	0.609642307205584	-0.694424015539105	0.487416337292407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69948589012259	2.74520981817997
Merged-chr11-99150136-3	3.38777945157544	0	1.40354875974332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30025217-2	7.72287666852847	-0.035979039826496	1.13416978154101	-0.0317227988367058	0.974693113192306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr2-35539676-1	2.9936763718461	0	1.3998753884096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38209334-1	2.1950980934173	0	1.40339618374676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47570197-2	6.47229737718285	0.084842274772244	0.780963174891136	0.108637996643146	0.913489622134626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55100800168893	2.27349904582731
Merged-chr16-20540585-1	2.43811054028278	0	1.41527016930379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66980650-2	3.07982738374067	0	1.39396924381458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142894860-1	1.84559703281175	0	1.4572486404067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25554883-1	2.18805134389489	0	1.39561738256805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51478028-2	3.13042062582253	0	1.41663228402055	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66344822-1	2.01659317891045	0	1.47960442775756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95794439-2	2.67726988430722	0	1.40930280512698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46478412-2	2.59826422232436	0	1.40878731860874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113668343-2	3.1771788825102	0	1.38259564455191	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34887708-2	3.59067858354379	0	1.59389048522249	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119098418-1	1.31653611391749	0	1.51463861775415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-40430358-1	1.64549761428687	0	1.57906151780422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-39276618-2	4.8737285528287	2.75713311466139	1.00806831452431	2.73506574399417	0.00623678181021077	0.143593910385958	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	3.15906099737795
Merged-chr1-172514627-1	6.65175479270565	1.36375750197184	0.703772582909387	1.93778151506568	0.0526498839048826	0.611537401535366	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26276386882201	3.79581050329086
Merged-chr12-21322146-1	5.89054936556448	-0.399796504066164	0.882932651860604	-0.452805209121752	0.65068901231783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05887775751644	2.7766673919232
Merged-chr13-41530853-2	1.85604595174674	0	1.67071570924292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94239796-3	3.98163062518813	0	1.37217689661012	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139042556-1	2.02810544309167	0	1.52509148452172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91167055-3	4.6501009077858	0	1.3810627776046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62726777-2	3.8178511977488	0	1.40216130953335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111269868-2	3.24736845839335	-1.24040869554067	1.31205257224198	-0.945395574676635	0.344456960624649	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.413263464506793
Merged-chr3-65603792-2	5.84336108739402	-1.20149504880183	1.26138190667801	-0.952522818379486	0.340831899171656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.376242425970964
Merged-chr4-47050401-3	9.42750659806289	-0.2851128617944	0.553787491395385	-0.51484164273194	0.606663683119802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58892063299716	3.33593944005993
Merged-chr1-15799845-3	7.59936203622402	-1.0522948616391	0.631313175893183	-1.66683494313312	0.0955472299173491	0.884432401982255	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30983433996409	1.55424902326769
Merged-chr13-45311724-2	6.81845452059987	1.92652273842622	0.868184510729634	2.21902454445674	0.0264850547620634	0.391435859654977	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7217938484671	2.58549287561058
Merged-chr7-45471163-2	4.18116227507733	0	1.37017152344281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101859932-3	9.30168113883115	0.243830100062208	0.610216896266226	0.399579398004459	0.689466333143182	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55828325774449	2.92921889783875
Merged-chr5-129016571-2	6.59092229250819	-1.03639635558672	0.637244345984728	-1.62637199077095	0.103870545521449	0.933279957423244	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98170123151581	3.09846886441596
Merged-chr9-105302496-1	4.90931552492057	-1.47415467717753	0.748562394197101	-1.96931436658489	0.0489170024312717	0.581219526811257	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33643563524482	1.86575916392988
Merged-chr12-110706401-2	3.14607214610576	0	1.38105303579854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130074073-2	2.89251306269276	0	1.40821985317153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132823750-1	4.06775906791177	-0.0370470180274205	0.854973443663295	-0.0433311915147746	0.965437527332068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11539020246932	2.0906146763627
Merged-chr17-30215838-2	4.96050015379889	0	1.38115793338282	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24297022-1	2.34684305594293	0	1.41196005262777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53376931-2	3.39213418713116	0	1.39850260720831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60082594-1	1.76212595712622	0	1.50370037968911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40233430-1	4.01277694074862	0	1.40041763006344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152555578-1	2.21356441360827	0	1.42755707056358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54711123-1	2.04298908673169	0	1.45359014299479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-125426538-1	2.85631805819212	0	1.41096193851579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-24575743-1	1.16179070771098	0	1.64323691152187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145898684-1	1.38253357387854	-1.80088093364013	1.5323783109387	-1.17521953996918	0.239906894726166	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.303163067301871
Merged-chr17-26231620-1	4.9842787583742	-0.134723640767265	0.988166083029099	-0.13633704200238	0.891554841979592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	1.13341594473881
Merged-chr13-102722531-2	4.81323682078413	0.0877736512119526	0.723675501697047	0.121288686719559	0.903462380552738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61418801975652	2.70089346712193
Merged-chr15-78330874-1	2.35037249380115	0	1.46643824745712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117680943-1	4.45615862699428	0.457476068214539	1.02439102230205	0.446583441532395	0.655175853414535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.51226750748471
Merged-chr3-107076798-1	1.09943329561131	0	1.97207397566222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64285758-1	1.79008325395927	0	1.55748352542926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104290031-5	9.95806473337295	-0.58049586077279	0.56604540862474	-1.02552878607948	0.305113749993916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18165601450959	3.50855573276435
Merged-chr13-60671249-2	6.40472561793803	1.84642930488555	0.763513983882022	2.41833069709809	0.0155918994077329	0.274025237602637	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	3.89269186260016
Merged-chr10-13443738-1	1.47302455338776	0	1.49049306753827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5291012-2	2.82978146423175	0	1.3917285712112	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10010166-1	4.39621759842265	-1.4786555545433	0.906793582291937	-1.63064183891329	0.102965915487172	0.928678228936679	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8452237720862	1.10718024078827
Merged-chr14-63846053-1	1.32979374431805	0	1.61664905178636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165845173-1	1.80730642109808	0	1.49267948800131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100685828-2	2.71768276536345	-0.693451827378462	1.39146715408442	-0.498360184315491	0.618230194904214	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr3-115856578-1	2.16568831515991	2.0989600333902	1.38004173999011	1.52093952854298	0.128275013173526	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.06702908365212
Merged-chr17-29398775-1	6.09229790735679	0.523381522179962	0.749916693869782	0.697919550875932	0.485227506874826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56126212538144	3.7403372720184
Merged-chr16-89986176-1	0.917384324719481	0	1.76534981167591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96365430-1	1.2209167529259	0	1.56403413540412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84940595-1	2.6316582007062	0	1.39355154885198	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37499520-1	3.83816948145371	2.73924242778344	1.14937455201606	2.38324610804952	0.0171607173702909	0.291096378389147	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.91035174140237
Merged-chr8-69013972-1	5.53632233992468	1.96612413127135	0.704001985991957	2.79278208072244	0.00522568832251879	0.127544181636413	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40790914314352	4.34319458084046
Merged-chr6-8410249-1	2.27106141100427	0	1.41504943807244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93913570-1	3.22049217031475	1.17762503621194	1.20248481967101	0.979326322418053	0.327418768468132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43775750113187	1.82161379270624
Merged-chr11-118490172-1	1.39734018696254	0	1.56559693711448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76948364-1	4.09626638092618	1.04654991003315	0.987999937917768	1.05926110910369	0.289480881453431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39912876297954	3.67926635779707
Merged-chr9-52154430-1	1.47716733537816	0	1.72088158767047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-54722589-1	2.55805645432071	3.01771499469726	1.50771795116022	2.00151161719277	0.0453372831007118	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	3.19315555305928
Merged-chr8-75101923-1	2.18174676529877	0	1.47541589836174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-50613143-1	2.13777395975045	0	1.42281108963674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-97126182-1	1.43844106195598	0	1.46856444628528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-69795536-1	1.7938649936254	0	1.47892312638085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25155889-1	3.92654051918948	0.038248386998705	0.904637713916381	0.0422803365483395	0.966275220428716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	2.0616452534421
Merged-chr9-118645057-1	1.84445682282127	0	1.56523603452479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82032379-1	2.19894772539896	0	1.54357111941276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94728341-1	1.00423386938901	0	1.96265793041954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21567971-1	1.55759367570812	0	1.86638197868956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35645964-1	3.50163234323598	-0.754919789945663	1.01758195638694	-0.741876155731088	0.458162373803712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64575952610471	2.28588258033092
Merged-chr7-144980002-1	5.30061281290108	-1.1415050068498	0.850670410576356	-1.34188869467834	0.179632087916607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00966469948822	1.60489118584155
Merged-chr14-60695358-1	2.85053714035762	-2.56794549177644	1.44019906450722	-1.78304899306062	0.0745783284250738	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04505084447063	0.730937814817307
Merged-chr5-148711630-2	1.99025375406531	0	1.48850479176595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5139148-1	2.49513758121869	0	1.40869750351134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35267708-1	1.58638462718532	0	1.58936640943811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26128949-1	3.3955709714576	0.663710485462155	1.10217880493137	0.602180410739692	0.54705405375835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.882176137820124
Merged-chr2-157075862-1	2.20937431331927	0	1.4244531591899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-81588054-2	2.81513858805385	0	1.39631585277052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167228821-1	2.46779319930304	0	1.52973513226795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125607051-1	5.93807660129525	-0.987092530600069	0.810199357486443	-1.21833289730372	0.22309749353509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11876479489371	3.21754277463409
Merged-chr9-100777263-1	1.83590273745766	0	1.52355582047227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82909477-3	6.8347308738374	-0.370084839379217	0.603960514047892	-0.612763302850409	0.540032858839361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55517181224799	3.24535265173393
Merged-chr5-140396733-1	2.20906100191475	0	1.49414193772965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64403589-4	10.0204819891095	-0.0819299752628732	0.619138007735511	-0.132329099876344	0.894723991390374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89285035065765	2.4479225375093
Merged-chr2-90575857-4	5.30608990190244	0	1.38586237949616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21394027-3	8.55878589137273	1.7216353572687	0.627046125026703	2.74562793477973	0.00603952144603153	0.141144602873959	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92526156064402	4.37423058673755
Merged-chr2-84064557-4	6.52981956638804	-0.133071454604022	0.837410944957851	-0.158908186482707	0.873741210775152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79479390299285	1.70863195646908
Merged-chr9-77596564-2	6.26513188249471	-0.987521120804493	0.678131916290134	-1.45623749167704	0.145326978621368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30396375559138	2.06611709152988
Merged-chr17-31685690-2	7.58821819506158	1.00446043194553	0.637790729949906	1.57490597585892	0.115278149098923	0.991990645380461	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09032553771468	3.39708968948789
Merged-chr13-99939475-2	2.99418632673002	0	1.40009233101793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80043495-2	6.78576494630983	-0.465577821543124	0.632708889554775	-0.735848396046312	0.461822964921718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50862919626934	2.89338344134988
Merged-chr9-120098912-3	3.63983588050726	0	1.40073515904551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132755978-3	3.32021739654234	0	1.38800926370599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67260595-3	8.21205329831752	0.752563811640808	0.663390283991747	1.13442091299934	0.256618030841595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60340856582165	3.32234097792181
Merged-chr9-7814086-2	2.96830064023349	0	1.43530749024567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67307332-2	2.64763938883405	0	1.40324865584279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92563085-2	2.79718715736846	0	1.41827078851133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180276964-2	3.53524104920539	0	1.42172110176598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29170218-3	12.0086020131975	0.331876869874971	0.449766841338189	0.737886476663195	0.460583437432697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9362504161967	4.15876614462676
Merged-chr1-53781956-2	9.5559681311322	-0.025973521991608	0.555054996903462	-0.0467945016917404	0.962677011249197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59276362242601	4.64460256236646
Merged-chr13-41084657-2	2.94047862892842	0	1.40924016552698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86757517-2	3.43855640031354	0	1.37936574191972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146762490-2	4.52564487794888	0.152905167854919	0.740526947499813	0.206481571496029	0.83641475840377	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34258099779799	2.95684050626098
Merged-chr6-125481249-2	2.77093597797382	0	1.40268769173494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107639158-1	4.87350787863636	-1.55379228731392	0.800080026072209	-1.94204609124149	0.0521315207634753	0.606683223545655	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19066760063031	2.25285891757623
Merged-chr9-105384786-2	5.13721574250216	0	1.45793537506705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22017415-2	6.60832068935105	-0.494289799060306	0.74158714287868	-0.666529623398783	0.505072635490557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13607820003867	2.76328984596593
Merged-chr7-114577134-1	3.06202943953656	0	1.43100470861166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88495413-2	4.11109979900405	0	1.45964885664303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99583689-1	4.49471136833505	-0.300862474782529	0.864360170414098	-0.348075356871652	0.727783590870746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42123658252047	2.10761444185592
Merged-chr11-101971625-1	2.84688533396839	0	1.38862379586752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30967777-1	7.82670547181372	-0.454468998522061	0.719348035557821	-0.631779022194231	0.527531283218343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2334902315273	3.41428019966518
Merged-chr10-88304506-1	3.06317958945353	0	1.40388158765107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89101181-1	5.43367778464585	1.39950109183795	0.990904150539746	1.41234759292879	0.157847639327362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	1.43996574690471
Merged-chr2-38296135-3	4.51469797701454	0	1.37802768542674	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118640098-1	3.26710834133002	0	1.41333539397886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41624834-1	2.65025874065814	-3.00177414375641	1.44994579747566	-2.07026645339604	0.0384273992349745	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45547307112966	0
Merged-chr2-62639955-1	3.45543534798979	0	1.43272259889275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105849539-1	2.96530596808586	-0.599194577201303	1.46587862035863	-0.408761386433692	0.682714779545483	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80499979717705	1.25156707489019
Merged-chr10-67113107-2	3.29694013209731	0	1.40618462338533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84337917-2	2.7005506396579	0	1.41918490757725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120133599-2	5.6551038053108	1.89067195075208	0.875480854292528	2.1595811507265	0.0308051089160165	0.430269569642489	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48219169541115	3.24156486142669
Merged-chr4-138042356-2	6.00713217350386	2.41124138882239	1.16029314233599	2.07813120740151	0.0376972760239786	0.489182675432669	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.921168194051549
Merged-chr9-54963782-1	2.50501562082652	0	1.4408448569566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58873144-2	2.88883889133013	0	1.41738140448524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-15294355-2	3.47403506572166	0	1.39218388627993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146099302-2	6.27774600329598	1.04211952251908	0.679778717017602	1.53302758152121	0.125269059216992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7945106220059	3.61516642637343
Merged-chr18-52598448-2	3.91664593756239	0	1.39963975553122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-74991366-3	6.32563994311947	0.350127918388616	0.902149491060106	0.388104102322537	0.697938996224901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19734880627382	1.6794096906117
Merged-chr3-8245356-3	5.86876305263799	-1.34836585398862	1.37263541839754	-0.982319001765779	0.325942716144738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	0
Merged-chr8-64896958-2	3.5279283161234	0	1.40587858504684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48775654-2	3.65303784287628	0	1.41515586521186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71680631-3	11.9023729689847	1.62729822547604	0.535805973900592	3.0371035500585	0.00238863384150425	0.0713290584396829	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24222873152439	5.12252731261995
Merged-chr19-12564350-4	10.5787097129666	-0.31780922379544	0.41550273691475	-0.764878773495651	0.444343734748434	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44576761387673	4.11442889806162
Merged-chr16-31907158-1	2.30869145135192	0	1.42954500083745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122797050-1	1.8748104566564	1.35303279192888	1.28003693777979	1.05702636540762	0.290499554791761	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03300427768847	1.87786674940178
Merged-chr2-58574242-1	2.56991658891147	0	1.41800565146021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148886548-1	0.974410410471357	0	2.03844369654874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155025961-1	2.41660699036673	0	1.42367011673489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34781238-2	3.49427986337255	0	1.38367305961212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31029283-1	5.76894791310887	-0.918782946858453	0.899731563487731	-1.02117451931648	0.307171762288756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70834153734062	1.71831293001695
Merged-chr15-58147022-1	3.06592702565104	-0.261752837108433	1.3604358475888	-0.192403660615351	0.847426025215944	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68041597300842	2.02922356684558
Merged-chr12-100538609-3	3.5620637639222	0	1.38778567292652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71104903-1	2.05547360356291	0	1.48013327586018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34022148-2	2.48413769714131	0	1.46942106883115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104227701-1	2.10274422923371	2.71289983322823	1.22668664212024	2.21156711100985	0.0269965900088946	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr6-17727672-1	1.65053027611496	-2.20510920838136	1.34815843183627	-1.63564545257331	0.101913811784583	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0
Merged-chr17-31871087-1	3.52152450749794	-0.0308235809372731	1.02804201006625	-0.0299828028771768	0.976080768320898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69181239031707	0.897114879832661
Merged-chr8-124375124-1	3.64174628903383	-0.669144688807728	1.252827385787	-0.534107648347252	0.593267058452512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43998711580515	3.09442756568703
Merged-chr4-48243922-1	1.31933135600657	0	1.78185478018332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94055148-1	2.62818994567134	-0.0329862577239031	1.39668506693538	-0.0236175344784646	0.981157685560962	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr3-86129959-1	2.39003928267221	0	1.47239139789094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137753092-1	2.04817798154312	0	1.53026799689296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156410833-2	6.40970470150669	2.3265354420848	0.684179386785279	3.40047579190653	0.000672686919492468	0.0268280177965452	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	4.15786311627139
Merged-chr14-54637226-1	10.2491846704908	-0.13917861483884	0.617495933414507	-0.225391953707675	0.821674370630111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30426983780186	4.23381975709418
Merged-chr15-74896477-2	3.38938988670777	0	1.38968491528546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20290587-2	2.53546516560691	0	1.42721288082348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88869622-2	6.97340584288681	0.852180811104305	0.683549287170294	1.24669987534052	0.212507564561296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	3.25758834847473
Merged-chr2-144721989-1	1.56571303667428	0	1.58888578739829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110711051-1	2.43005242686464	0	1.42105319951281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67318212-2	4.27134860648364	0	1.39401657405163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74909292-1	2.42254716645899	0	1.42532921824139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13992680-1	2.39506387104871	0	1.46581095995236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102492972-1	2.54584873024718	2.12575258973378	1.36874271520371	1.55306951855988	0.120406527283799	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.97908007631626
Merged-chr5-115514475-1	6.92011783902794	-0.133294005691269	0.619534290794986	-0.215151941824279	0.829648858302368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8808117336549	3.78121184944302
Merged-chr19-56475038-2	3.15966102768258	0	1.39137351798218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25352360-2	9.09733439907025	1.35816478282265	0.701501901055601	1.93608140017713	0.0528577321769387	0.612903895777775	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14949198390242	4.33721351107416
Merged-chr12-110373573-1	1.87780442508099	0	1.41861413282559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117199202-1	1.42017551659998	0	2.42582401773001	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3586775-1	3.61439705456183	-0.0354875024327096	1.42692183287796	-0.0248699694790813	0.980158680706281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr15-5288685-1	2.69254566566361	0	1.41252835873919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5799241-2	4.24591246652805	0	1.38868519440389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116028331-3	8.77194156277972	-0.282697721732728	0.537274754160211	-0.52616974749651	0.598770271455901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16850635525073	3.83729172401525
Merged-chr15-66979513-1	1.3425598233529	0	1.56676772236415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79407426-2	2.57245462523782	0	1.44116600801736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53905864-2	4.30284404277473	-0.171923522914489	0.829939845696885	-0.207151787934858	0.835891318219195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91063189988333	1.47751579018518
Merged-chr16-64884117-4	4.73486451693751	0	1.3664964391706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-8760237-1	3.20956289738506	0.963015601037416	1.21102117224552	0.795209549682572	0.426491617672347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42760559021134	3.27842871467593
Merged-chr8-122558930-1	4.52571997315867	-0.34640266630967	0.869728988710256	-0.39828805387223	0.690417865267513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9001726754443	1.4068548238317
Merged-chr4-148760348-1	3.59868120566114	0.237593210286511	0.918806339004069	0.258588997703311	0.795952373144671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86437446250718	2.33892399172959
Merged-chr12-40539069-1	2.28361313870536	0	1.49788008788877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61477674-3	3.93439091509896	0	1.38918816212315	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104856276-1	2.09242590045625	0	1.42442853317579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117485606-1	4.9605002221272	-0.639230639483889	0.700946404639953	-0.911953660440323	0.3617931119646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93342099941049	2.0560328530563
Merged-chr4-155511271-1	2.24337571486763	0	1.43689756126797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136702572-1	5.07286213611727	0.865269571517236	0.69834432628393	1.23903000131978	0.21533438778501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16636329215445	4.11504166704505
Merged-chr7-90822332-1	1.1940431919562	0	1.75901957886603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38695417-1	3.47949609947191	0	1.37880109650103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24010016-1	7.38719737766217	-0.303149448961785	0.824042417071676	-0.367880879286602	0.712962058106048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89166297673732	3.11956558783047
Merged-chr4-117544833-1	2.76594953475267	0	1.41454310619897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132054031-1	2.79369990745445	0	1.42762797167739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76944882-1	1.72188342633533	0	1.58119721157405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20023232-1	1.64541959717485	0	1.50746962424427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167823604-4	5.0394837914067	0	1.37630429521854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44275247-1	3.59170996131072	2.14843746955043	1.26152463127897	1.70304837201021	0.0885590164167094	0.842783538759788	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.62438888480879
Merged-chr4-99169635-2	8.7037197443701	1.38752804200343	0.655537030694441	2.11662801189669	0.0342914308177412	0.46240854428151	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41751376042665	4.82832291486054
Merged-chr5-37971884-3	7.78730210987689	-0.102604081133276	0.652137316299063	-0.157335086597349	0.874980769492066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38097024974186	2.22309659453365
Merged-chr1-192088088-2	3.80556431489575	0	1.37834408673788	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43530801-2	3.46960915359456	0	1.36803912094846	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99299470-3	4.01285499368401	2.12538021180826	1.24545739623818	1.70650575300916	0.0879139561010503	0.839928153839663	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.06702908365212
Merged-chr1-37308191-3	3.22785166046499	0	1.44615933864643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97760187-1	3.25342830229602	0	1.43048382600804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35888271-3	7.52512865921198	-1.07405312119436	0.778097000958699	-1.38035890110232	0.167476167773752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.17737099179639	2.86385229026015
Merged-chr1-105650877-1	3.36248460767062	-1.80802825597178	1.19192424760773	-1.51689862808028	0.129292280059498	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0.601513806634888
Merged-chr1-37531748-4	3.45333663205645	0	1.44213997338821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132039062-2	3.5578732764318	0	1.4377824847923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95256328-3	3.92777013728219	0	1.37202609484316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57778620-3	8.96021071881327	0.0986493421508884	0.518621482592262	0.190214531140906	0.849141024793771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62156610423494	3.83439432140532
Merged-chr19-43679319-3	5.70109458050733	0.81741904272466	1.22277852245253	0.668493130779858	0.503818865263774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.02674429890598
Merged-chr13-64110522-1	4.2201480644615	3.9318279235651	1.11947030494512	3.51222172325316	0.000444377098978186	0.0197675079569191	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	3.13652564528655
Merged-chr17-29022448-2	3.65086068641863	0	1.38347493631039	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117882353-3	4.03859022688515	0	1.38220820159868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93906421-3	4.44597401103088	0	1.37831100948808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-30046176-1	1.73172570651616	0	1.50440115557902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125313491-3	8.14647237311332	0.965878714183786	0.680626655655747	1.41910209680697	0.155869252731715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20213796229157	3.9007786007877
Merged-chr13-91464774-2	2.7256584035174	-1.54585173403745	1.49356112137034	-1.03501069485468	0.30066391661695	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.303163067301871
Merged-chr6-124282906-2	3.07181619108616	0	1.37914808068192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-60897421-1	1.19227151301432	0	1.72719962427191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142735531-2	2.6751477364933	0	1.40588918563079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107671702-2	2.71138257508737	0	1.44350322753071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151820743-1	2.21794448124355	0	1.42293885805522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149207277-2	3.14813438512202	0	1.39425922674047	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95154096-2	3.34850746977541	0	1.41029208586325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24407097-2	4.27000752928489	-0.0150442050182147	0.883220288350802	-0.0170333553436664	0.986410005911726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76302217368042	1.67023962132385
Merged-chr19-34756750-2	3.50806835403605	-1.34296051552361	1.23819892643573	-1.08460804387018	0.278095290839167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15768836563541	0.724326877898254
Merged-chr2-167269936-2	2.7791225738942	0	1.39071277555819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-11369977-1	1.32999463434793	0	1.50388346777293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105631182-1	3.9732446454885	0.405070678404963	1.15606196608784	0.350388379072568	0.726047246469556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.18909650862134
Merged-chr5-92374249-2	7.98493269219037	-0.518181447683745	0.782229140939413	-0.662442014192208	0.50768798517193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62128842389662	1.38647389072186
Merged-chr4-128824401-1	1.71966034741478	0	1.52009952496846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78353256-4	4.01064704213332	0	1.40134365842022	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67315322-2	5.7411020306114	0	1.3685405857105	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103272207-2	4.10832000406758	0	1.37645569019205	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68077592-2	4.31536797415993	0	1.3666682017187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22368077-2	3.86373037892219	0	1.38058848175185	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19562609-3	3.804969969112	0	1.3875252093336	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167230012-3	5.78754986698563	0	1.36894404360629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133206078-1	5.8267097182518	-0.327248379118949	0.764748109299155	-0.427916558589275	0.668711871126042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58803346718389	2.89512019427384
Merged-chr11-72564518-1	2.32457956820538	0	1.47680636232838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55803774-1	2.43446898526386	0	1.42074971458642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-136294618-2	3.31996792745991	0	1.42915986124643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120102957-2	3.1576435073674	0	1.39299390939323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61576137-2	12.5721560456562	-0.493666953500148	0.483531357321758	-1.02096161091709	0.307272627055252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10090416753232	3.71017039018781
Merged-chr17-63430577-2	2.94013940986763	0	1.40977524294392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145877206-3	5.75610413229352	-1.34649856132583	1.365503863857	-0.986081839067464	0.324092954723222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr9-105779338-2	9.45079678944466	-1.53915936370691	0.696865006799896	-2.20869084928651	0.0271961513471939	0.397721303159075	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46980391248742	1.52554022439958
Merged-chr5-141094399-2	2.62070534034242	0	1.43166793930932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80123879-1	2.14429957101841	0	1.41679670643579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94381516-1	2.0743070407794	-2.9086945473893	1.39191792412628	-2.08970263042996	0.036644520578681	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0
Merged-chr6-38145827-1	1.20923056682713	0	1.54319869218484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96294717-1	1.94290714231997	0	1.43408457693116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13319450-2	2.47984793258885	0	1.45013926873383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132546090-1	2.07397605376183	0	1.4092731781274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85882228-1	1.10396182027956	0	1.92801189364314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20750398-1	2.22617060619393	0	1.51650655413459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25167273-1	1.57316726261912	0	1.56589285376402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34213089-1	2.20536894928422	-1.69083753864069	1.16389237226629	-1.45274389533832	0.146294874560006	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	0.723581231604105
Merged-chr6-120181498-1	3.47025934946194	2.18915687823891	1.21131762637244	1.80725255752683	0.070722909558904	0.735966092793786	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.21347085688945
Merged-chr3-127151531-1	4.26480224193415	0.217665794708347	1.17473076196652	0.185289941964208	0.853001626588034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76859093112924	2.74092691867627
Merged-chr10-26806325-1	1.46982421227014	0	1.59386324404657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-55429430-1	1.99156458140598	0	1.55433856690791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111133316-1	4.39766488123769	3.4202099002052	1.05041916062034	3.25604294783175	0.00112976660935039	0.0394431490800756	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	3.59540282955195
Merged-chr10-84381718-1	1.3340988311106	0	1.50202799932776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92895256-2	3.57651762499075	0	1.40416642767013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10350712-1	3.0703062197065	0	1.3941770073345	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106567666-2	2.42692890859348	0	1.49378144232362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96531268-1	2.70993772622158	-1.4748394965285	1.76970865433415	-0.833379829451871	0.404630546819222	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30110526804544	1.43852373395375
Merged-chr3-146157613-1	3.63971091720144	0	1.36660819539473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117431733-1	4.80506488646629	0.272082673805132	0.88029846068974	0.309080029052814	0.757260650425204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79609831033908	4.02079609268659
Merged-chr11-103418255-1	2.44941621305421	0	1.46663350075787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71278250-3	7.68765623890608	0.658128292024085	0.840989164219568	0.782564532368052	0.433882876030075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93400390053251	3.99210427536436
Merged-chr10-21429391-1	2.58088372190358	4.06183116148565	1.2832217089708	3.16533856393641	0.00154902593159906	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.33281980666031
Merged-chr11-78885124-1	2.33271551476908	0	1.48061837986337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102043937-1	1.65469488369942	0	1.49693138393876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114785903-4	7.91730812627615	-0.894742897440041	0.660766104800768	-1.35409926589655	0.17570471038737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19026700899049	1.93681263768315
Merged-chr5-64722340-2	3.17531220790081	1.71435089681718	1.25247382187901	1.36877183927505	0.171070606167903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.13341594473881
Merged-chr2-166046439-1	2.74949088866193	-0.587514802581447	1.32636758690601	-0.442950211073789	0.65780174798641	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.600815099743027
Merged-chr2-25166517-1	2.31343237676649	0	1.44191208034735	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121477866-1	4.96689780725941	3.2535722007338	1.19906805184219	2.71341747095602	0.00665931535029473	0.150454581515657	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.25828150351514
Merged-chr17-11637894-1	1.74857624112027	0	1.49625580854702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50816488-1	3.32382675452801	-2.11651418332737	1.25810144887469	-1.682308040596	0.0925091227694608	0.865823588950606	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73221591485062	1.35339221635894
Merged-chr10-95509496-1	2.29956960723032	0	1.42362189937742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58553134-1	3.63463172942547	-0.434472563977009	1.02152223760215	-0.425318752724228	0.670604324929998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69733277475078	1.47418322843784
Merged-chr19-45544281-2	4.41188060769826	0	1.38262465846836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84064673-2	2.39470823898491	0	1.41908280233659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108255481-1	2.88160445257736	-1.90822552961279	1.33992114001556	-1.42413271395257	0.154408058059349	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr1-191131509-1	2.90068203393501	0	1.51033807947229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23872924-1	2.9079565686134	-0.56696082738014	1.01053793857603	-0.561048532407456	0.574764452637819	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	1.11816745933907
Merged-chr7-83482816-4	4.56542534398889	-0.0361506504333514	1.17117459845437	-0.0308670035032012	0.975375604767285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr1-171821052-1	6.7697429157554	0.888901448311868	0.756232890151334	1.17543346750494	0.239821340551883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74201053162259	3.85072096808215
Merged-chr15-99471205-1	2.32534331738843	0	1.40906302791446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111567773-1	1.52556770207491	0	1.55880011732563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134698647-2	3.240860749842	0	1.39187413488159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27757734-1	2.25078259102378	0	1.40819337223886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59058150-1	4.48620588441813	-1.87683999288832	1.23250761055289	-1.52278166627011	0.127813338266512	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	0.303163067301871
Merged-chr10-59899757-3	3.48021955050713	0	1.4449163523126	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79112975-2	4.01837913223869	0	1.39818365502396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-97116165-1	1.90402017094768	0	1.43116416668943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173634434-3	6.91035117925179	1.88031066700656	0.722552237655591	2.60231796265342	0.00925959584177331	0.190443575619733	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	3.49716019317657
Merged-chr3-107149208-1	2.5237486681496	0	1.39131826461986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143605509-2	2.5719128825363	0	1.48601869419167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74995100-2	2.46141640086453	0	1.40904486258715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64936679-3	2.75418050787586	0	1.41603269755489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72164608-1	2.01687608114959	0	1.51986442514266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-45026470-1	2.10851938361165	0	1.45415441630919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3512600-3	9.80664928252859	0.543679599966905	0.731032716403912	0.743714457324656	0.457049241152228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80725200154661	2.00792583616385
Merged-chr11-79019491-3	4.37846887883333	0	1.37884778862558	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45430572-2	3.37667477142306	0	1.3987044870751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25023405-1	4.4528560764359	-0.666540656341938	1.00440159561878	-0.663619670905945	0.506933764062844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72549481808021	1.39408867961451
Merged-chr11-11836896-4	5.67931278828042	-2.75433553706695	1.16928817124832	-2.35556606557172	0.01849450802109	0.304331971871439	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69181239031707	0
Merged-chr11-96859832-2	5.77188681458891	-0.713606098096373	1.05333429945875	-0.677473522378463	0.498105563955017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.09266895777963
Merged-chr8-84726011-3	5.2558228193771	0.487224505663109	0.945075143045031	0.515540493524432	0.60617538067638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01913900782325	2.36579990745821
Merged-chr4-19870570-3	4.24930955064112	3.18292553718423	1.20963974269819	2.63130039864967	0.00850588151403503	0.18047276082023	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.56379394835609
Merged-chr7-90243336-2	5.99856881346026	0.660114006080615	1.03702256394304	0.63654738964472	0.524419703367438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	1.39293125551424
Merged-chr5-64410549-1	8.88928570661784	0.00804174039793059	0.585934466349491	0.0137246413375074	0.989049664353411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8203197719781	3.83420910635766
Merged-chr4-55342806-4	11.1219468139249	0.583805315063837	0.652811637775448	0.894293669538796	0.371164786140169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77823742786405	3.64084565741671
Merged-chr4-100998269-6	17.3374505621216	-0.238811961692566	0.535168306864848	-0.446237115743246	0.655425975088193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.74173654466067	4.34110156421857
Merged-chr2-71336493-3	3.9487159017388	0	1.3801823554352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57761943-2	2.45399194445408	0	1.45697774195919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132114180-4	4.53409478307961	0	1.40540753173801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69051830-2	1.73304520282992	0	1.50112363546049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68662577-2	3.39987733408165	0	1.41669068901864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17709701-1	4.484003015366	2.58014245663592	1.19719976909639	2.15514780677192	0.031150269687975	0.433511907314038	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	1.57273024438942
Merged-chr13-23412558-1	1.95022117553591	0	1.558398736952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109922414-2	3.15710109439209	0	1.38072739301514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113942783-1	6.82156472307786	0.648929021718856	0.747674230615073	0.867930169513821	0.385432561767607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0567288954595	2.95607701788624
Merged-chr4-149756579-2	2.22461268821801	0	1.40818331102619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73918216-2	2.35520736918649	0	1.45124973599263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58803098-2	3.48697326079303	0	1.40411961164678	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58457139-1	4.4418664205658	1.1177700105574	1.22143207613577	0.915130716145654	0.360123011468448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.79276062464305
Merged-chr15-67095551-2	3.3085646524499	-1.90491173990598	1.41806651787993	-1.34331620970355	0.179169605512895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr13-90886866-2	3.95063512006496	0	1.37243347255158	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80684033-3	4.38769475475128	0	1.37035543419127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117842269-2	3.34190725974817	0	1.40188809414537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128973854-3	3.80102887826896	0	1.38762259689384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62511659-3	3.69538851296654	0	1.37360121735211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80242823-3	4.09780735297439	0	1.37713969548862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70873481-1	2.33452620132542	0	1.46826735290236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21220726-2	2.7064609497949	0	1.4306791071125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42139985-1	2.52499535453466	0	1.42477302548986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45032017-1	2.794375540662	0	1.38775948214376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129363284-3	8.46960196990983	-0.34824270907384	0.859417738778317	-0.405207727698145	0.685324825154664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08315481461717	2.49842795975363
Merged-chr7-45709405-1	1.19889805177798	0	1.72475326756995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39085851-1	1.4871196014596	0	1.62271612584216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97338972-3	4.07471290510694	0	1.39177049638906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68362048-1	2.2787572507731	0	1.42283166256749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121330535-1	0.79776164659088	0	2.27766560565894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107446820-1	3.22846388622311	-0.356065328412873	1.35312571594565	-0.263142828649911	0.792440494310127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05916644618774	1.79065725465852
Merged-chr11-121475854-1	3.23824096410035	0	1.40961911517637	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46115902-1	1.41111801612656	0	1.6548800546915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146823988-1	2.2803082617343	0	1.4062666807481	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72587127-1	6.28310127568754	0.437519759767579	0.660880598101137	0.662025426415414	0.50795492655124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07172379387659	3.98757854553444
Merged-chr13-23436419-2	3.2277217230003	0	1.39152850105947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41574006-1	1.83232620586601	0	1.50525011975915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65950965-1	2.4954013683116	0	1.46113588417163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102616415-1	2.84581834862053	0	1.41725825930122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73629611-2	3.46229037748979	0	1.43768930037615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96131548-1	1.53144450141392	0	2.23982348461923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134244375-2	2.58613562627363	0	1.40892476153681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129430663-1	1.76689542506533	0	1.4499096849572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52071400-2	3.93172654558171	0	1.38773149427807	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36621326-1	2.34391578824162	0	1.40251393774395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15709839-1	2.34761130198017	0	1.42975186788404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35099672-2	5.61563784819967	-0.755007836701437	0.943768287074858	-0.799992802302703	0.423714967403013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	1.10718024078827
Merged-chr11-51356577-2	2.66808205490547	0	1.52736704429015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-131825977-1	3.39454915941282	0	1.40547087494403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24738902-1	3.71555789399903	0.251829831977512	0.965238250141833	0.260899142714773	0.794170285970614	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	1.44648342098783
Merged-chr4-47010467-1	4.94521242461528	0.62531157944303	0.998055290528361	0.626529998264922	0.530967367029819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00433461556273	3.56113135662273
Merged-chr18-5133238-1	2.87091628855877	0	1.40874488233967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133906385-1	3.14099331301522	1.48624272251267	0.903829648140089	1.64438367956957	0.10009697412019	0.911571689763684	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84016081186083	2.76157413738455
Merged-chr7-121275347-1	2.86677596975448	0	1.41672355652789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35800784-1	2.61844438538446	0	1.40237939540471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113814528-2	2.94838342066887	0	1.5058049093273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117111735-1	1.79656177102091	0	1.52485398725144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38092073-1	1.3884013568469	-0.0419572053072823	1.54116544142605	-0.0272243356744744	0.978280805836134	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr12-54806322-1	2.94937794950191	0	1.38725383298232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48467054-2	6.63094092286498	-0.6671140589987	0.722935996867702	-0.922784398465611	0.356119572824757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41046107166493	2.78597213134036
Merged-chr2-91136753-1	4.15129050416513	0.606866877868268	1.00830991858054	0.601865425188507	0.54726372056095	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	2.0616452534421
Merged-chr12-100528478-1	1.87050397278407	0	1.44905285770088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70891612-1	2.34930910614595	0	1.40561571893622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81011460-2	3.58602295912462	0	1.44127980219427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90259524-1	1.44627643925314	0	1.61526369169055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67047082-2	2.48409768987752	0	1.5145572680073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21242393-2	6.51673860215394	1.85203652094441	0.789488470750703	2.34586898930057	0.0189827785606708	0.309596417575609	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98859768019381	3.64355388254509
Merged-chr7-64227092-1	2.44228992444596	0	1.43696116055146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102493500-1	1.78857466962437	0	1.47560639662073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90420880-1	6.00960723788654	-0.78500307424175	0.857892381237726	-0.915036770823382	0.360172326673558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48291042896862	2.2200817938085
Merged-chr5-125272789-1	1.61424420995282	0	1.73891022687826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10849087-1	2.07096412607456	0	1.45480337430205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37997631-1	2.0519630289656	0	1.51258703474574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-147064560-1	1.64612032106535	0	1.48173675175317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55446823-1	2.79605671225942	0	1.42421016080662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-110080957-2	3.54096991963968	0	1.39151990590267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34952820-1	1.17360214069169	0	1.73415489342089	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33962902-1	3.06240561193146	0	1.40809612095885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45931336-1	3.6916346549003	-0.547399405100223	1.0282920950103	-0.532338435505271	0.594491616343352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35544309136857	2.1304360554358
Merged-chr3-15580432-1	1.17183461929764	-2.54439862949849	1.6183297933361	-1.57223740178036	0.115895504400238	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52765326036496	0
Merged-chr17-56751639-1	1.63632995132353	0	1.53256853694658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58188645-2	2.99127761136955	0	1.38796551808846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105328636-1	3.71833017205291	0	1.38545167983851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55887973-2	1.88413536719301	0	1.44574567148356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135377974-1	3.58343113417275	-2.02630489505414	1.23519295257647	-1.64047640559113	0.100906150343933	0.916024954332977	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	0.303163067301871
Merged-chr5-3224039-1	2.63665148634521	0	1.38405335135042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3024405-3	5.39544264360178	0	1.50052938704651	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79368876-2	3.03843649007286	0	1.42541562812928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102690016-3	3.94030102342671	0	1.3671167062752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53344938-3	3.95225533576318	0	1.38192946306917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78607002-2	3.45021120126501	0	1.39483926617731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51360340-1	2.36592298618781	0	1.44602487257502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117345375-3	4.2408230287522	0	1.38225988214218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56951035-1	2.45773237943559	0	1.45646863121626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117281953-2	3.23420199179131	0	1.41146564154965	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52199170-1	3.47357067878352	0	1.38076190648925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77049493-2	3.40875557028955	0	1.41824953013682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19162253-4	16.9889816165122	0.347324486045417	0.469580315888431	0.739648733759826	0.459513162855221	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82630986129691	4.86750538614856
Merged-chr2-32502058-2	3.46785841830781	0	1.41418295204342	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89000488-1	2.04161593825028	0	1.44925566754546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9429542-1	2.07274545500847	-1.80265194867154	1.64286271989028	-1.09726267864423	0.272526580622516	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0
Merged-chr14-75121845-1	3.39186703034181	0	1.42194281194413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31047819-1	4.8520287744769	-0.416514814610252	0.71138042719783	-0.585502213282601	0.558210078834497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09204907037813	2.28918762047504
Merged-chr19-47408852-3	7.45652428200389	-1.30239629521884	0.768056879993781	-1.69570292141565	0.0899421549994634	0.850881587820367	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98459585107782	1.39949824061849
Merged-chr5-74253864-4	7.94957330985658	-0.796244041819863	0.75524053268739	-1.05429198693371	0.291749256258155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3060951186802	1.56277881816808
Merged-chr8-94486187-1	7.59146336766314	0.0460305855906708	0.633137604838668	0.072702340279409	0.942042986206227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16823365037562	3.18716770297686
Merged-chr11-69614186-3	3.31196416114903	0	1.39287336358982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78441033-3	5.09205663747623	0	1.42953157622546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55841854-1	2.53417530757083	0	1.41881458934906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47255833-3	3.64561591276395	0	1.39972151580021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30589876-2	3.3068319123375	0	1.40482375767579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12155823-2	2.73880702664823	0	1.49923845259685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83091587-3	9.84373503721819	-2.03085878033268	0.555844764392136	-3.65364380566505	0.000258544875616693	0.0128701839685419	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57235412639696	2.83706883937342
Merged-chr17-71869563-1	5.70574329122691	-0.70357558118733	0.697921906246185	-1.00810072715951	0.313406108599471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88039562928176	2.24501482532651
Merged-chrX-135569657-2	2.60621155198557	0	1.41580660691021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121815292-3	4.41678775486339	0	1.38417182938987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91091715-1	2.11014512378198	0	1.48451824171121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32530630-2	2.76454980851585	0	1.43151718613719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95573419-1	2.06541159431376	0	1.45437868241724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21366547-1	2.34210285352501	0	1.49363552193993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100311376-2	1.27340563207149	0	1.72397532279286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99500171-1	2.34509061985762	0	1.46350982177181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70755837-2	3.51235068981175	0	1.3865068032795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95798742-1	1.44110739588931	0	1.50104880417004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85572399-1	1.65606368657517	0	1.47416756522731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70832536-1	4.65315453980826	-1.69315384717319	1.0181681857733	-1.66294122211964	0.0963242017831437	0.88913012136694	C57BL6J_F1_Control-BALBCJ_F1_Control	3.067986562315	1.01784625364355
Merged-chr7-109541757-1	1.46975353700798	0	1.50383618483522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102456987-1	5.49953026750624	0.0129033026045065	0.843244594107666	0.0153019689597429	0.987791271665136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29330441206616	2.77779094367089
Merged-chr13-8745788-1	1.82812763602584	0	1.43159388364993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56299032-1	3.59220209984876	0	1.3768296115365	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108287221-1	1.63842442812837	0	1.482421658956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67404619-3	8.26710054288682	-0.0751492561143789	0.63463827445936	-0.118412738624057	0.905740632828378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45977098888523	3.23302213387641
Merged-chr10-56427560-1	1.97590707868925	0	1.55664671220983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40457630-1	2.04304660158477	0	1.44247505946851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-56726824-1	1.68023775254235	0	1.54483358397615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40656614-1	2.4101905628171	0	1.41435668679352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55963574-1	1.42278820835333	0	1.5575257580858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50155041-1	1.72068415876511	0	1.54730881440668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35534179-1	0.847123224160031	0	2.25619366151323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50991793-2	1.89039321879708	0	1.66595239261051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73726644-1	1.44775310681766	0	1.7904592878244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165959944-2	4.33076456962663	-0.0349390775198387	1.30944929110618	-0.0266822684598372	0.978713155816879	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.601513806634888
Merged-chrX-129765447-1	1.59583540999537	0	1.54117995554482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18373013-1	2.16018587205061	0	1.42727575201211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100002051-3	3.96864936120783	0	1.39332605340236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118237476-1	2.11775568866884	0	1.49290703442155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104025593-1	1.97683510135268	0	1.4672870407905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16226352-1	1.70697257486385	0	1.48008019737214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-141064963-1	2.49266913384417	0	1.43330812591711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33540240-1	1.61639105360271	0	1.47594483076229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3340458-1	1.9061960203015	0	1.50250284581907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30755055-1	3.27835375597841	-1.91026208899219	1.44645686305003	-1.32064919306627	0.186618362105406	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr11-10064907-1	1.49251918391332	0.00500616216826474	2.16331176648548	0.00231411960394306	0.99815360134412	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.45451904642141
Merged-chr19-10940575-2	3.01253220658567	0	1.38329980409942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136598657-2	4.61021376687066	-1.89523396100495	1.34638176384933	-1.40764975573231	0.159234806492682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr7-130041270-1	2.23706492176026	0	1.40504615042618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91051861-2	2.78536318066123	0	1.47117462471826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21983215-2	3.97705172193318	0	1.37737535094029	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129472107-1	5.06202850305214	-0.466442171305662	0.86319021008317	-0.540370089763552	0.588941830713666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92797716160218	2.58934039553399
Merged-chr1-161403432-1	5.21444884866059	-0.394423618949613	0.930426364031966	-0.423917070922619	0.671626293969454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03933265466087	1.75191520103598
Merged-chr3-90445619-1	1.85076728952016	0	1.49390645338526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125489684-3	4.39468994579116	-0.255742570336022	1.13832320130064	-0.224666043917766	0.822239082339547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.990331813111976
Merged-chr2-102945282-1	2.19874354227454	0	1.450269931377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-132022185-1	2.61640136851822	0.997505519543448	1.19573887386676	0.83421685231135	0.404158796347989	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.45451904642141
Merged-chr16-64876945-2	3.14462869509002	0	1.40619940555804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87481057-2	5.9827539669146	0.966875706200878	0.789356817306096	1.22489055013247	0.22061646137747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48853090112376	3.1152049759818
Merged-chr10-118131019-1	3.23328788491889	0.436059074366632	1.06918962152696	0.407840728704302	0.683390609892758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.25298535761957
Merged-chr18-9357396-1	3.9291988876197	0.658538009612656	0.816143267838328	0.806890206123844	0.419729741885135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53823966306787	3.003960471792
Merged-chr10-127229091-2	2.57592456687109	0	1.39691579849289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127289484-2	3.70755796694134	0	1.40317346994206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100533907-4	8.71505593640138	-1.46295084671472	0.638933235614966	-2.28967717621802	0.0220400374429916	0.343484631698274	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51388403976045	2.26776262876125
Merged-chr3-79045663-3	7.16134528028645	1.15500280746318	0.856417674442194	1.34864429113454	0.177451247129369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30811930973386	3.1138203918139
Merged-chr11-32341312-3	5.61103297595198	0	1.35375529751043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91456822-2	4.33147073155287	1.79715963575245	1.27394747911144	1.41070151259763	0.15833264479375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr6-119401735-2	2.91425384493139	0	1.39516054081299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-3251121-2	2.93643156362278	0	1.43830771913037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-85937069-2	2.52782545998731	0	1.39282022281307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55002149-1	6.7587915419153	0.908249310475784	0.745175163412097	1.21884001919359	0.222904918944343	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57618756717262	2.59290060737804
Merged-chr6-87504113-4	6.52268960989872	-0.00602490958538192	0.99434529850804	-0.00605917239657287	0.995165509475451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	0.897114879832661
Merged-chr5-88572143-1	3.18069226858222	0	1.3827059205466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75598292-3	13.0964837590067	-0.501367202956593	0.491332052874182	-1.02042437496945	0.307527238575628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.8363576859086	4.12277828976136
Merged-chr13-60666130-3	3.76788670467508	0	1.41725200844782	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94410074-1	2.36593370099442	0	1.52253421853347	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45273978-1	3.54505198254508	-0.640501707175724	1.38103536681324	-0.463783710806544	0.642802714955729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.465515277017237
Merged-chr7-102245377-4	8.37663002216224	1.34204792578611	0.623786166062223	2.15145509599558	0.0314402964606888	0.436653826087528	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03815873647658	4.20928395459025
Merged-chr4-137955299-3	5.76224692703533	1.49175197200515	0.775518677023033	1.9235538952221	0.0544105248085165	0.625042628500876	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77167105195599	4.04217063501027
Merged-chr6-134471094-1	8.13252070945516	-0.283747075658459	0.767312239594651	-0.369793496071892	0.711536361658828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30063697193663	3.27856532241258
Merged-chr3-19301450-2	4.70476077082217	0	1.40159132594801	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76750849-2	4.38946770797179	1.68037452008364	1.17889011762466	1.42538689141735	0.15404539517942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.25163494309627
Merged-chr1-40412625-2	2.26519854745118	0	1.56733248473301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47006228-2	2.30637215970294	0	1.55546924568672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30729469-2	3.36941789613776	0	1.40133962417963	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95729110-2	3.43261942694149	0	1.41851550111686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84061501-2	2.36649938386668	0	1.39433850936501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60202336-2	2.68222135428236	0	1.42971909288673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45746525-2	2.89742072486472	0	1.44272959145264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97716640-1	2.08722989126679	0	1.45907728488306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75279846-1	3.5320670093565	0	1.40517548604849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34641722-1	3.52871133618033	0.643143592141306	1.17589009134077	0.546941926696552	0.584418630118546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87791898198041	1.95133512502194
Merged-chr7-97944690-2	3.44815722524179	-0.62475467785103	1.38047343456969	-0.452565520064333	0.65086163170818	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.303163067301871
Merged-chr13-35042273-2	3.91826536887601	-1.26094081313498	1.3983236580739	-0.901751755292369	0.367188753163672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.303163067301871
Merged-chr2-125789018-2	5.09633215883528	-1.7555470734236	1.20482137343655	-1.45710153565436	0.145088354568381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.376242425970964
Merged-chr12-69511088-2	1.80947826232486	0	1.66210024635505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-43830589-2	2.29488696734966	0	1.4983815066741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38440012-2	3.25358029545583	0	1.42874949750751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79398565-1	4.73587505618694	-0.507139322280578	0.891554921670971	-0.568825666208075	0.56947445482375	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63379099656069	1.74294609266651
Merged-chr6-125482395-2	9.65955034810788	0.338602214256531	0.529491610631774	0.639485513004673	0.52250713505959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34876999111567	3.62842964516902
Merged-chr12-80725040-1	2.34328199130876	0	1.48432510421153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116649527-6	10.1697403614134	-0.0905660896190264	0.604852782266038	-0.149732451059789	0.880975704546561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47765358356006	3.34099254679801
Merged-chr11-98859314-2	3.64134400970552	0	1.40181722035401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98884719-2	3.16672333644462	0	1.39650242311338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45496724-2	5.26023865915719	2.04024898202006	1.04376098564375	1.95470898997217	0.0506174283889032	0.594044576439387	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.64818605663689
Merged-chr2-120007916-1	2.40577578034871	0	1.48582671945501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104444945-3	4.607230711943	0.550933787741136	1.24869098970842	0.44120906796147	0.659061649054527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.724326877898254
Merged-chr17-69178854-2	4.68323405250982	0	1.39819475646216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-61241741-2	3.14403623645735	0	1.37817681945895	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74679073-4	10.565504791695	-0.158785913658641	0.705507358045713	-0.225066275847902	0.821927715909428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47555738456387	2.46923228759992
Merged-chr8-4109053-2	4.03326712154213	0	1.40708924203682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70195945-4	6.80965190793497	-1.04520337480087	0.71840551939575	-1.45489329714502	0.14569880375563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56493919553409	1.29543960232692
Merged-chr9-96143823-3	3.20269040625457	0	1.40996908720665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94265383-3	4.08487903776618	0	1.37969831441671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34743552-2	6.22230183032798	0.580377803238281	0.781667756254919	0.742486559787183	0.45779259197433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60978507060531	1.95438815053259
Merged-chr18-64758762-2	3.31733432104724	0	1.40871159668598	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88260554-5	9.58323867794809	0	1.38220252855738	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150073296-2	3.87434822879504	0	1.38231705093919	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-117190640-1	1.37923077450852	0	1.55164757947655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90453552-1	1.91347829209819	0	1.47160013759607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-92848518-1	2.5608563252634	-0.595242248250087	1.00660780389427	-0.59133482369923	0.554296101021954	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9001726754443	1.25115482808927
Merged-chr10-41626413-1	1.27337424825978	0	1.67016234057584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-137015575-1	1.8819178281144	0	1.46616461071804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17143488-1	1.14219239779816	0	1.96356646445697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129603585-1	3.63909880371139	1.93788414590889	1.16823429387991	1.65881463680786	0.097153150000938	0.894594394657991	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	3.06480362612895
Merged-chr18-57255199-1	1.20333309648098	0	1.54846539247657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89416232-1	1.63989487827694	0	1.48516365021883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66911919-1	1.42882055910841	0	1.78869919385723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70300809-1	1.48207875827748	0	1.78240542993743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45664441-1	1.80449433311533	0	1.59251437171845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23495626-1	2.47501610580635	-0.693900745265339	1.38724869197543	-0.500199242774003	0.616934791496089	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chrX-169794560-1	2.05864237718588	0	1.48620037486359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65781756-1	1.55051929652184	0	1.53432699981208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106443725-1	1.96709007255243	0	1.42521029583024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10922216-1	4.18787839977619	0.125434176926531	1.00211694776484	0.125169200267797	0.900389600071675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6842871404533	2.77919038917544
Merged-chr9-57580113-1	2.06124175302187	0	1.49761654971874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129780431-1	3.64685704638076	-0.544970395781233	1.01411106332616	-0.537387289705527	0.59100012112186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39205353263629	2.68544380860533
Merged-chr2-52602528-2	1.99408690003573	0	1.52559847367414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129611113-1	4.40067236374679	-0.216855206038053	0.992916715751324	-0.218402210978957	0.827115743007328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80310538461141	2.82014377254526
Merged-chr16-35906036-1	3.90084471893024	0.674205232822802	1.11464510188474	0.604860894003655	0.545271428808851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.27743081564928
Merged-chr13-59508766-1	2.09986235960024	0	1.4441306836938	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65567374-1	2.8312037176319	0	1.41329588114694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147493404-2	1.88708269856373	-1.33434409116418	1.52010368928355	-0.877798074283396	0.38005330970971	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr17-35750535-1	5.121161158073	2.30854784460862	0.951099471321964	2.42724122367547	0.0152141362352912	0.269771869984982	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	3.45214347177347
Merged-chr17-16435316-1	2.85945116165716	1.74031945462748	1.40937200510265	1.23481908844978	0.216897841559334	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	2.19131771511459
Merged-chr9-120830687-1	0.949328567511811	0	1.85030539702874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113032155-1	1.38565984272226	0	1.6759311626793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-33176492-1	1.2932604458624	0	1.50724717265434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25472135-1	1.60882552097388	0	1.57769435070592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149783282-2	2.42116956422154	0.713681951706135	1.31685232789473	0.541960504293682	0.587845714380272	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	0.662147012823607
Merged-chr12-51844738-2	8.461420651117	-0.0773646347826531	0.576354184708602	-0.134231062834684	0.893219863586218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59670281116625	3.53936016623177
Merged-chr19-20994848-1	4.84002850925268	0.528878129866921	0.914940801982932	0.578046283126399	0.563232872002739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94612954451957	4.06449541252694
Merged-chr15-51407364-1	1.18123546424315	0	1.93608002562136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74062924-2	2.93289204305338	0	1.38611996559977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121848772-1	4.29925578461158	1.12929857165613	1.01871034373274	1.10855708750161	0.267621299011694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	2.04612129124541
Merged-chrX-155212786-1	1.87079590685253	0	1.45411713108317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42915238-1	2.20402039955436	0	1.49344183892681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-17490898-1	1.55671448358485	0	1.63331502862915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37789946-1	3.86940677823591	-4.80706560348139	1.19509097422313	-4.02234282340407	5.7622105688982e-05	0.00372447091931911	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82905551530969	0
Merged-chr10-25313291-1	2.39198702616404	-1.83163058061228	1.35485125893386	-1.35190528741406	0.176405615884885	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46402698790757	0.376242425970964
Merged-chr9-20857322-1	2.15015483152138	0	1.4254713249328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85698643-1	1.2533682301785	0	1.65903327463635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52085242-2	3.52157339923372	0	1.37290030111409	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90810941-1	2.03235541843435	0	1.45291982937555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99550891-2	4.57286114926412	0	1.38241838794843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40299230-1	2.39031303018864	0.912204976937241	1.482743355595	0.615214341372778	0.538413177904612	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.81026551200827
Merged-chr1-150761200-1	1.35876898870549	0	1.52260660159058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109147760-1	2.54895406514092	0	1.44781210763861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49200210-2	2.8523300410083	0	1.49710345387007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184589507-1	1.86690401011029	0	1.49059942126566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145274887-1	4.9337898237776	-0.289717507444679	0.754097707990474	-0.384190940212139	0.700836932694228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77236700208554	3.48342297470218
Merged-chr13-28607831-1	1.9507830823433	0	1.5151211383549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166074331-1	2.13084871443356	0	1.58446476951371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15810729-2	3.01743380842316	0	1.45942751833644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-105835103-1	2.09881670146456	0	1.53522019103638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122029231-1	1.48689288914037	0	1.73035886654018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17506981-3	5.2079234469184	-0.984784572868975	1.07504874476538	-0.916037135677872	0.35964741775916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.577068348605183
Merged-chr14-70797665-2	5.2536981942809	0.036276113284391	1.0619319766539	0.0341604868126256	0.9727491750935	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0.815775955292901
Merged-chr1-95380700-1	1.22025257757906	0	1.76038935510855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95067740-4	4.59969075207662	0	1.35618406969864	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4225390-5	8.80795552343626	-0.287767065071192	0.509412298621922	-0.564900113031563	0.572141706804682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73113161366567	3.46253170814982
Merged-chr2-85007935-2	3.43885776969468	0	1.39661332530274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-56771584-2	3.06460235049753	0	1.4011008846987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180919876-2	3.12667042726238	0	1.41213264923417	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89091066-2	6.2003109626211	0.63597265611027	0.732916383339313	0.8677288031312	0.385542813991574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47111615257247	3.47507943531634
Merged-chr5-32742295-3	5.95238983263031	-1.82426126712923	1.27320794765024	-1.43280700571811	0.151912998698261	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0
Merged-chr14-87443690-1	3.71061997866258	3.34876920463544	1.17754706646485	2.84385168118068	0.00445717907463423	0.113126202106814	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.62438888480879
Merged-chr5-96172031-1	3.12650379116974	0	1.41120638387291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57698488-1	3.82574195144896	-2.24400899691486	0.928125229452917	-2.41778687369332	0.0156152198221646	0.274064220491497	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20119350150595	0.662147012823607
Merged-chr7-38084251-2	5.10847860582366	-0.159868200552113	0.867479703436082	-0.184290421918664	0.853785627442939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63821580913992	2.47532878085311
Merged-chrX-164962976-2	2.83148599656527	0	1.42498295935298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8196485-2	2.7686930442195	0	1.44867463604493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123626840-2	2.84156976400975	0	1.41319645942289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9082747-2	2.98223481891071	0	1.4186114448397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70971550-2	6.57089679977032	1.27753923339337	0.83013456569527	1.53895438906749	0.123815431661042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8452237720862	3.90750123844462
Merged-chr2-163759993-1	4.22167503799247	-0.239624417970596	1.00220232242502	-0.239097847419451	0.811029710887738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99758327100279	2.82586305950125
Merged-chr9-115315589-1	2.79048844150993	2.13580362280743	1.31845263350959	1.6199320085714	0.105246883097861	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.40024388691264
Merged-chr1-151927604-1	2.68275917195281	0	1.42498219099896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84983134-2	3.23571971906948	0	1.37790985337468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88632364-3	3.77000543901221	0	1.39339333000754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101966937-3	3.52629005455477	0	1.41205424694389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53249030-2	5.30463498920636	0.250114501101373	0.961032830714105	0.260255938307043	0.794666357869988	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	1.47792296811651
Merged-chr3-90005148-2	2.26904446823528	0	1.39880644085698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33667296-1	3.7655055944188	1.2361655204876	1.12757839381065	1.09630117717136	0.272946994417895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.39479953640345
Merged-chr9-71616203-1	2.58356386117597	0	1.39622901136415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40296625-3	4.76703695670873	1.53696604059779	1.04998724913967	1.46379495737413	0.143249980664416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.60401468765691
Merged-chr9-25559401-2	3.06025323411752	0	1.39723784638511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73964328-2	4.07672826195016	0	1.40021069580408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44306435-1	3.51044349314903	1.43623560080126	1.13961230107743	1.26028439623141	0.207566786865318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.62144175773092
Merged-chr7-100979317-1	2.66945297986699	0	1.41445277479422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113634970-1	1.17864988716878	0	1.71053407106983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95008385-1	3.03705632178635	0	1.39108054249787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170206492-1	3.26396976412783	0	1.40096388388612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46124535-1	3.2117087704602	-3.22127350773109	1.25285676770536	-2.57114268028495	0.0101363556210692	0.20339997486732	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14680093235515	0
Merged-chr13-107827834-1	2.44047365227549	-0.696196440861242	1.28700168115341	-0.540944468881588	0.588545858851551	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.13341594473881
Merged-chr6-137136284-1	2.14266187218757	-3.23593339542758	1.25305862910362	-2.58242776536514	0.00981078976623606	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21068215388718	0.465515277017237
Merged-chr4-8727239-1	1.48578621898554	0	1.60920859953751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85529728-2	2.12158667329448	0	1.46700751049877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69205376-1	3.15187715881394	0	1.41320074788082	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31169498-1	2.76619616575931	-2.02010224877057	1.58835134295375	-1.27182330139497	0.203435907930931	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50521364448448	0.662147012823607
Merged-chr4-145361302-2	2.63088039668493	0	1.49242096898216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-56655178-1	3.24883369601676	0.904542563473248	1.02793033086985	0.879964853948626	0.378878349445993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00259395741298	2.51743756083911
Merged-chr10-87679688-1	1.76129919402739	0	1.66383520089897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50027088-1	3.80024463294087	0.259091370676869	1.16455074010629	0.222481822177384	0.82393882249381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83514313210961	2.56085389292969
Merged-chr9-94615491-2	2.59977814390361	0	1.43847243994131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105534119-1	1.93360332160988	0	1.43096937661002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105757971-1	2.6144191929556	0	1.51201100122107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109063241-1	2.16931948488464	0	1.55387859141126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118649232-1	7.41467101630287	1.94791731218674	0.702788060444608	2.77169949494364	0.005576449027996	0.134036543532512	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75733238011489	3.68581443208643
Merged-chrX-61664211-1	2.88443597897547	0	1.40261630992742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101685670-1	4.11594148844561	4.53837167487994	1.15440474082786	3.93135224966709	8.44694021690143e-05	0.00510753307286479	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.27605019868467
Merged-chr18-64936223-2	2.41056709862281	0	1.38511480710223	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90142359-1	5.96436738587669	-0.319140663672868	0.694778151044964	-0.459341824714655	0.645988717429126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52863192190685	2.349571156376
Merged-chr1-172346433-2	3.41116015949871	0	1.39218757507953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157313649-1	1.46688712022748	0	1.58860416268363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121267097-1	2.90758758556223	0	1.4275914798553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114821451-1	2.93006071233206	0	1.4016139505964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140302778-1	5.08535389868813	-2.01241067982934	1.43864754466587	-1.39882119654034	0.16186660833609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.4042992837822	1.97194432603249
Merged-chr11-23565949-1	2.10178480379632	0	1.39633519793674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86452519-1	1.78138580469621	0	1.4812590088149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-11230517-1	1.11359027904052	0	1.63830494999752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90227418-1	1.94392188028246	0	1.44025353218667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77845594-2	5.68052666509271	0.792778349671382	0.694003445131669	1.14232624525513	0.253318435900289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78602543656573	2.71573426745914
Merged-chr3-88244324-1	3.51742853595542	0	1.37246822402338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107782846-1	2.66135289953236	0	1.42419541111013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95799342-1	1.47372108303566	0	2.22064884714701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80060062-1	4.69248219240137	0.458921673294291	0.870050257574696	0.527465705916295	0.597870225403716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02326711107977	1.93960303562856
Merged-chr13-4759834-1	2.25000057158971	-1.70602331530783	1.22282538996299	-1.39514875084452	0.162970987700463	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37544986530815	0.577068348605183
Merged-chr17-79092487-1	2.58452981445585	-3.30439742640077	1.25144391832161	-2.64046784520117	0.00827916486564363	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35422199170889	0.303163067301871
Merged-chr11-54966517-2	2.40405273441981	0	1.41946416995726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169008515-1	2.0081294301471	0	1.44858769121554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86110388-1	1.95830150445806	0	1.55351347722852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36074801-2	1.66546161512071	0	1.73968920634776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63141038-1	2.11440600203712	0	1.50117342277181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69417117-1	2.71889494265678	-0.451069504385289	1.43758624066472	-0.313768657229718	0.753696750964434	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63718095058825	1.81769545692961
Merged-chr13-118190842-1	2.64430086905249	-1.4126059725662	1.25601553261277	-1.12467237537078	0.260727891874497	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05370079472873	1.62144175773092
Merged-chr18-35094155-2	6.39844341755336	-0.634650961791424	0.661932436191225	-0.958785107197981	0.337667013280525	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49513901051627	2.85290524816814
Merged-chr12-3791336-1	2.18881250957854	0	1.39618801194477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26024244-1	2.9458555901381	-1.21725504324607	1.10650250433153	-1.1000924430636	0.271291846095313	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56485155503272	0.990331813111976
Merged-chr14-44052717-1	1.91214467832613	0	1.55563168102629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148169847-1	1.97361844753326	0	1.43839112274163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-22108695-1	2.15710572678385	0	1.49024031206756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90634841-1	2.34475971988452	0	1.4061681632631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-63863952-1	1.53238005965428	0	1.52472621067133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3016040-1	2.59376349094589	0	1.43370310250552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7585110-1	1.98777754679309	2.89919668274903	2.29278661484126	1.26448604679671	0.206055625758759	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.71947671163926
Merged-chr10-127480951-1	5.72462441701042	0.411958969836004	0.762865452623091	0.540015239147997	0.589186523009526	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18210741161866	3.00717000215863
Merged-chr2-30469953-2	3.13152631778526	0	1.4022643358154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5123870-3	4.5293113514038	0	1.39391662461069	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96575637-3	11.7304695407978	-0.19120945527841	0.541836931166732	-0.352891145434995	0.724170049252367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34631678286037	3.92395544244924
Merged-chr14-87464341-6	14.8897038579758	-0.831340182890859	0.513032670959503	-1.62044296581744	0.105137156605361	0.940920430673497	C57BL6J_F1_Control-BALBCJ_F1_Control	4.80208123259411	4.05749834039934
Merged-chr2-129898337-2	2.79234198854148	0	1.39714341314887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83271627-2	3.21896674835489	-1.05233567399813	1.16526410658282	-0.903087693213296	0.366479355080116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.67591700901439
Merged-chrX-71376292-2	2.78402455407687	0	1.41538139726514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90549149-2	6.91844087624835	-1.2190201134062	0.696771013457629	-1.74952759208076	0.0801998636064928	0.794964330011915	C57BL6J_F1_Control-BALBCJ_F1_Control	3.9362504161967	2.349571156376
Merged-chr5-95925667-1	1.7623669319755	0	1.44670125545439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162612742-2	4.94151834035584	-0.618844727172042	1.03036531789793	-0.600607101600197	0.548101706827192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.662147012823607
Merged-chr13-30696521-1	3.1136518223968	0	1.4018799462768	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136605504-1	2.56350513009346	0	1.42897203756439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75298020-1	2.08003567605914	0	1.41930044533475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115479512-2	2.20724112579947	0	1.44816124168509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-28188186-2	3.6998400786443	0	1.3964799037668	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61020169-1	3.45330842482491	0	1.42181904121192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20576343-1	2.4640801194893	0	1.45322274477147	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43407668-1	1.70053655244778	-2.27281346788909	1.32568663975489	-1.71444246304641	0.0864474955618288	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0
Merged-chr2-150914298-1	4.63659809222548	0	1.37633345588265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92666847-2	3.58155005922316	-0.80769054741865	1.18346107239746	-0.682481719303555	0.49493439822587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	0.577068348605183
Merged-chr11-54072801-3	3.47224251022941	0	1.3995305712007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76227544-2	2.75943224797313	0	1.43617573961236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84449707-2	2.51373082361331	0	1.42980117339194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186932135-2	2.17152794705847	0	1.53552405304865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34871659-1	2.23470320169626	0	1.49549891374095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154305630-4	6.39797249427908	0	1.377648060224	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13559018-2	2.79807689935253	0	1.37612882398782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3676605-2	4.34473492856007	0	1.37309016071528	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90077012-2	3.71776771606542	0	1.36717351487251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57079780-2	2.77835474627282	2.80456323278676	1.51932345273204	1.84592900724569	0.0649025141914383	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.948471875794396
Merged-chr13-94094365-3	3.47361593487885	0	1.37313125605174	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65517277-2	5.96489836814081	1.44202348406724	0.913170227566687	1.57913983673097	0.11430398601593	0.987378993431135	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43750690265746	3.1872214034049
Merged-chr11-100841013-5	8.05341608399062	1.11288296927772	0.684444947465162	1.62596418221696	0.103957275116001	0.933674531949764	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	2.55842900344077
Merged-chr6-55511799-3	8.71931905359892	0.0356854992699896	0.494999691122427	0.0720919627021819	0.942528722418226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53929296090467	4.5348572245003
Merged-chr1-85122017-2	2.40702175121037	0	1.42244901037783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134967802-2	3.26583071537961	0	1.41036600709275	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78178562-4	3.95079447569377	0	1.37050176595079	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128424277-2	8.11178575780013	0.989087743714514	0.648393340597189	1.52544401952607	0.127148386336407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	3.45007677026704
Merged-chr5-137820966-3	4.23345953728866	0	1.40345266948898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31926792-1	2.26266255482144	0	1.46587494784301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35166312-3	3.23574192426516	0	1.38229947515076	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42387853-2	2.51819263423783	0	1.48073116438378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23144362-1	2.30943421418515	0	1.41400492348774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92880966-1	3.01774500012705	0	1.40861187572598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65681129-1	2.77710184164503	0	1.39360289110505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136608567-1	1.54221937814471	0	1.56178792911871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41329020-1	2.66410726250546	0	1.51529637825496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120379413-1	2.69333321319785	-1.05635162916811	1.84747819357177	-0.571780296429829	0.567470827573138	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93999571227277	1.84558675562706
Merged-chr1-106632139-1	1.77521805970211	0	1.49399153081303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94565565-1	1.65147366802918	0	1.48576855551623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75541836-1	2.20549548408136	0	1.43564497970648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95229798-2	4.18896357510929	-0.338577503205337	1.00767493765112	-0.335998733872015	0.736871821251373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02133452738648	2.90605946854913
Merged-chr18-4248481-1	1.81030217909036	0	1.60907911799424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81261761-1	2.26475539056073	0	1.48267887196921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15535999-2	5.53301261862096	0	1.36471306324847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86585811-1	2.43786224746513	0	1.45842067993727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-25243280-1	1.57682212197806	0	1.47097917867547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53207512-1	1.31173762210104	0	1.59822243929976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180885884-1	1.27803466488683	0	1.50429569176359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3771526-1	4.80386577643959	-0.19033424583228	0.674639474845369	-0.282127347908163	0.777845864030672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87613034754277	2.33494576651626
Merged-chr8-82960413-1	1.29788092841814	-2.37877734913474	1.64238182256576	-1.44837048026906	0.147513465999604	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0
Merged-chr4-139234846-1	3.96772881951403	0.592109116882326	0.895047070622538	0.661539639999596	0.508266302068527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	2.43647206672967
Merged-chr3-81264854-1	3.81729840515765	-3.5757820704103	1.04321168475954	-3.42766681264168	0.000608792148249315	0.0248075954922673	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65707512103572	0.71701424649985
Merged-chr5-18038452-1	1.9306864868261	0	1.43339486118179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-121572000-1	1.57783890432856	0	1.5307425102965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124667661-1	6.95645471301697	-0.468538949029997	0.652752844383153	-0.717789210819547	0.472887266843339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80425001585269	3.13914154406106
Merged-chr10-95662011-2	2.01763638753461	0	1.6125793214758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98945608-2	6.24378188715613	-0.311786454519563	0.820294793143369	-0.380090739482567	0.703878059691084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98465223817743	2.32793197598816
Merged-chr2-13237805-1	1.92838617408854	0	1.5093380793027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73637752-2	2.96618351059332	0	1.40078770173744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46153097-1	3.54045700016682	-4.550675043487	1.11223517424681	-4.09146837724195	4.28650404093401e-05	0.00291162303217194	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31324941431418	0
Merged-chr12-76580846-1	1.89280615330145	0	1.58251543518522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-150689377-1	3.15280401315541	-1.32844296890948	1.1656106901918	-1.13969696751055	0.254412570989193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22077570854077	1.69536696930465
Merged-chr3-95065761-1	1.90811378200817	0	1.45662044691419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115511791-1	2.78990686222137	0	1.40923872013095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96712906-1	1.76789800180134	0	1.55044443310904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126197642-3	3.7013154478901	0	1.37770333104601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40359088-1	1.28090615278891	0	1.91644301961489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-74988241-1	2.24713981276247	0	1.41632362324678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36534934-1	1.36904055856924	0	1.7293015962286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95053892-2	3.52678723858833	0	1.37567629204587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45009491-2	5.61232381940379	-0.0290195900011084	0.684102440711155	-0.0424199480576933	0.96616392641058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01285831174562	3.91718492949695
Merged-chr14-61669043-1	1.9932586745442	0	1.43149127559384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118237144-1	2.56520341487796	0	1.44396591082328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7927442-1	1.37578123713968	0	1.63864222447946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143470162-1	3.07005295193755	0	1.42838637657587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118157245-1	3.00414641536528	0	1.379438434873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135382522-2	2.56682677650592	0	1.47165182874092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107559368-1	1.73576223500975	0	1.41761535075189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-81398796-1	3.29113347116875	2.36770284806811	1.24826982371255	1.89678770013538	0.0578559633248225	0.651811877797726	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.53933126993545
Merged-chr2-21117354-1	1.64227667676747	0	1.5090829231547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103676768-1	1.76781208888607	0	1.46766396636477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-103778231-1	2.86667120720134	1.78032523013537	1.1907349015911	1.4951482716736	0.134875750193531	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40590822918039	3.25252425060669
Merged-chr1-194984281-1	2.18964281192261	0	1.49877966216145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129518197-3	4.54378664574471	1.23501081815761	1.33690773627413	0.923781637766191	0.355600017325304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr1-156465000-2	7.65439079132505	-0.0853544376488784	0.90374846748998	-0.0944449044388834	0.924755746609133	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46442189296888	2.1011430468432
Merged-chr2-48988229-3	3.77093374685556	0	1.39391384304245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67070022-3	6.68077941192663	0	1.35357993224611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-62638817-2	2.7723579948592	0	1.41865312603384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135889502-1	2.73439542059195	0	1.41193507957121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84763756-3	5.28582008297457	0	1.44554099451661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191446167-3	5.13437800301215	1.21466979454372	1.36195172956411	0.891859651246579	0.37246816386738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr6-85141226-1	2.9984054749119	0	1.4002859412249	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76611666-3	5.51385938891252	2.43540448228881	1.1769586481987	2.06923538564089	0.0385240036609906	0.496003390575032	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39234354082305
Merged-chr9-40241554-2	3.41106880151461	0	1.40247485303889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55365666-2	2.9528063046829	0	1.39305582576099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44292470-4	7.8732613436881	-1.21941804542332	0.711993553120759	-1.71268130178771	0.0867711869032171	0.83291452390464	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90870545105247	1.55431789539114
Merged-chr3-116601168-5	6.26385148724703	-1.30672166388389	0.836702425642866	-1.56175197278757	0.118346429924593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31742847155177	1.27992882773773
Merged-chr10-62594097-1	3.66803421015931	0	1.38789538885888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57749374-1	3.50133440440105	0	1.3825558806234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122806067-3	3.81532690243243	0	1.38845002666586	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21826052-3	3.60967873575232	0	1.39666698773434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67882264-1	3.68663053601614	0.542034371205228	1.40984897572575	0.384462719438586	0.700635522185379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.465515277017237
Merged-chr9-66877226-1	2.64181033777531	0	1.42209932806529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72539424-1	3.13913113242083	1.82377930626039	1.3489295530364	1.35201968268478	0.176369018854299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr1-172619423-2	3.92739296462103	1.05940195317577	1.28898985105748	0.821885410739768	0.411142117013213	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr10-51497315-1	4.39059560605131	0	1.40009878476273	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-98367623-2	3.14091223181767	0	1.4301739154213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32138816-2	2.97018121047937	0	1.40093114380853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60760510-1	5.32655782233309	0.828939517545127	0.747195021221402	1.10940182148176	0.267256876952085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83504774294774	4.22682015641414
Merged-chr15-91301563-3	3.23178781117844	0	1.39196961871476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169987461-1	1.43551309216492	0	2.41857298067154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167219546-3	3.13946361619615	0	1.37873050477028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45590007-2	3.36373215315114	0	1.38479826003125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76801431-2	4.64517648350953	-0.690250033256014	1.42101988719806	-0.485742697533274	0.627149606692722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr1-162164010-2	4.05372250774816	0	1.46330963223502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-6411887-4	4.1156255449036	-1.6179678778394	1.22641603595328	-1.31926510287495	0.187080500116396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0.413263464506793
Merged-chr1-65112206-3	3.69119566457156	0	1.37130381680672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123714842-2	3.33486882396616	0	1.38375980599834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142711299-2	3.16666639225951	0	1.37449756778694	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107785415-4	4.44029477845106	-1.87421769580207	1.27676979813704	-1.46793705375611	0.142121321974541	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr2-72235126-3	6.85819883018889	-0.507533819947785	0.729439625088519	-0.695785919069306	0.48656290875973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31260716574699	1.52633957112176
Merged-chr4-125962849-3	4.73594991624234	0	1.39250551187761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37322965-1	2.23710618753956	0	1.49283740690742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70281210-1	1.40719223605546	0	1.53451217850098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-27457489-1	2.28732281180678	0	1.41642108674401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36992929-1	2.20129286233257	0	1.45755287332914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50841913-1	2.04945726542064	0	1.50441847996147	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107228041-1	1.1772903230623	0	1.58002383797011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-112431306-1	3.02658020237431	3.49605715630962	1.26764574424073	2.75791337776597	0.00581716105480758	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.25587014000139
Merged-chr2-128775143-1	5.39052837420377	0.0833197904864002	0.74035988813573	0.112539579495864	0.910395589155065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73785777016281	3.80806062954646
Merged-chr11-48808406-1	2.15914756349851	0	1.45880017831278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-114249332-1	1.35690069182617	-0.0316563819740657	1.57670136595068	-0.0200776016674397	0.983981467824151	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr8-88653503-1	3.01845244139118	-0.475945411797458	1.07862832124742	-0.441250616567377	0.659031572957757	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	1.18984215491549
Merged-chr13-30788647-2	3.34158002607619	0	1.41855223274462	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-13117425-1	2.72388830048884	0	1.47596100144169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65951267-1	1.72070452841551	0	1.54190944698159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165438470-1	1.63407914735537	0	1.60111282904986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102050748-1	2.06026873491363	0	1.41919924011615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-42946125-1	2.75490870776237	0	1.44831308653654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-137927081-2	3.64231917528002	0	1.38752249113318	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39543983-1	4.97481782178452	0.165051092579329	0.722311565046746	0.228504014841085	0.819254435288781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20749095265581	3.30111247281453
Merged-chr9-114723544-2	2.30714534296337	0	1.43528693481409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103484314-1	1.88471284207989	0	1.63774435933655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36745023-1	3.26507325351336	3.31184965638124	1.22748974932297	2.69806705775581	0.00697433901980022	0.156015676863095	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.6036906679178
Merged-chr4-139487342-1	2.10482375833244	-1.93595110619851	1.37474973309097	-1.4082207543665	0.159065712515702	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	0.600815099743027
Merged-chr18-61091580-1	1.7733125788733	0	1.55431155348866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-74425807-1	2.83442141945673	0	1.42267453008452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67051310-1	1.08612132903802	0	1.57636600824608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102351120-2	2.95177044022073	-0.00500660047370791	1.16416938085545	-0.0043005773524373	0.996568646305083	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15658857927843	0.887876939341704
Merged-chr10-93189594-1	3.70544322987304	1.67835984767555	1.29174883169457	1.299292715809	0.193843493222624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.00033585660626
Merged-chr5-150375391-1	5.05573874161295	-0.329736320243554	0.813196178740168	-0.405481885999997	0.685123330647342	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57568469721097	3.23804148383188
Merged-chr1-184502731-1	2.05453186749121	0	1.42069947852172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122600987-1	1.83619783532049	0	1.44883210720433	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148820607-2	3.93155419707241	1.72337097551307	1.2898955481273	1.33605467358585	0.181531403635133	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr18-30447757-1	4.24178165353675	0	1.39286577608175	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45757252-1	3.90781613761756	-0.891170491265221	0.859260333396404	-1.03713677523398	0.299672118441007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50724812564465	1.59184561974686
Merged-chr9-14805754-1	1.64594425640003	0	1.86260048313545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80296141-1	2.71581770662806	0	1.4463085630414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-1253116-1	1.73321898675363	0	1.4757713155139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131490364-1	1.712600083884	0	1.51847593085378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-37360395-1	4.56994929901739	-0.790129575497574	0.685092781153068	-1.15331761950217	0.248780040755944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11431153618456	2.13795322910058
Merged-chr4-19952198-1	3.65493033406218	-0.442211899488757	1.0846567100858	-0.407697564931653	0.683495725424369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	0.730937814817307
Merged-chr14-31472561-1	1.2661998900781	0	1.59184591516574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79537140-1	1.32095077789271	0	1.54437960059497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45205901-1	0.935665312005419	0	1.96038523328989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118619998-1	2.55000338017518	-1.39113508325608	1.45894544011493	-0.953520978239244	0.340326172313351	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57403368136583	0.55634759613363
Merged-chr14-90618173-1	4.99626398033458	-0.374133473289754	0.900347934496523	-0.415543212745827	0.677744288034785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.91365221224915	2.85767763803539
Merged-chr5-105004538-1	2.17728210940158	0	1.48310358627018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137159587-1	3.37066352213137	1.52698430486872	1.01822656075773	1.49965082793793	0.133704874078318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	2.9220913379402
Merged-chr11-11740700-1	2.02896670230497	0	1.48120633477703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44752326-1	1.85718448704581	0	1.54301812412025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185913998-1	2.75077314062497	2.55480838368035	1.84947673875764	1.38136821628614	0.167165773311949	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	3.63323617291029
Merged-chr6-50679332-1	1.88136283558938	0	1.46950212376606	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38782884-2	2.43091148576674	0	1.44529136820567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-3601415-2	3.96588455656979	0	1.38760439616785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128724942-3	4.00300696931381	0	1.36713076679877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64108497-3	8.31415271626199	1.92314935065285	0.65886310343003	2.91889064760337	0.00351279426755704	0.0958594295131191	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84060451162803	4.9020085852629
Merged-chr6-125433888-2	3.8027330902797	0	1.3988891742436	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14104314-3	5.51469021637786	1.57504620366182	0.924145365512167	1.7043273303534	0.0883199518040836	0.84134254862758	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	2.95684050626098
Merged-chr17-51294758-3	6.62635730532191	-0.816384807414372	0.8308207145886	-0.982624521848403	0.325792270962653	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57804496846817	1.60650301571838
Merged-chr10-71362628-1	3.27754576811567	0	1.4099152859427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24856695-2	3.20459252992824	0	1.39539888627347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13832169-2	5.76150362588031	-2.13289846130992	0.978337547145805	-2.18012532334307	0.0292481731252498	0.417187468621215	C57BL6J_F1_Control-BALBCJ_F1_Control	2.939741729574	1.28022059301586
Merged-chr11-30781084-4	4.26003568289698	0	1.36766011148051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116106991-3	6.86112352026642	0.259038011388617	0.773402968519239	0.334932786571239	0.737675788983564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65013357957091	2.46977098265323
Merged-chr9-15015762-4	4.25767153770898	0	1.3714744837496	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141731812-6	20.0259158781822	0.0633255795590323	0.349765631324555	0.181051463859441	0.856327181124191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.13892783978139	5.22358739967467
Merged-chr19-32911484-2	2.3509418033654	0	1.47335763583909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42848256-2	3.39441775739316	2.6977000068795	1.30263001770631	2.07096410355232	0.0383621507604719	0.494652829073568	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.897114879832661
Merged-chr18-75218980-1	4.94452156087014	-0.0342112268824271	0.875809049279108	-0.0390624268047777	0.968840617157556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48366051229539	2.46067151507303
Merged-chr1-91347074-2	3.41894210800095	0	1.40894065767014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146272491-1	3.03077073220389	0	1.37991288875998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125580232-2	4.02825281567518	0.131277637728758	0.971125358886602	0.135180938822633	0.892468817366436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	1.45526469271556
Merged-chr8-84928844-3	4.08335972504096	0	1.37248847018285	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26965014-2	2.28026079547189	0	1.55495009959598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29640716-2	4.62338621221171	0	1.37462997498675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-46347564-2	3.31416435524139	-0.0081945110184493	1.02768919164958	-0.0079737250182577	0.993637955332691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.26411936531267
Merged-chr7-34378799-2	3.38612904686449	0	1.39473124875481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72871473-2	6.45070964023769	-0.0521600195421278	0.704874426518975	-0.073999023910855	0.941011161939225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09454312602522	2.44455971424094
Merged-chr1-191439846-2	2.94602660566902	0	1.45755260633852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86201933-1	5.82603911438093	3.42558195510477	1.16476222488556	2.94101395281887	0.0032713979774788	0.0912901850759462	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.90672280706949
Merged-chrX-135620450-2	3.2874241343908	0	1.40036610237099	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-33017538-3	7.27815866348064	0.681400296803319	1.04998058886584	0.648964660898491	0.516361218399847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15025660736152	0.88866493597531
Merged-chr7-80642095-3	7.34070911625923	0.481988314519812	0.713849835786922	0.675195664909673	0.499551460511201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	2.46153873000129
Merged-chr6-116345346-2	3.50160668523729	0	1.3941775786146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12006832-2	3.87322136067721	0	1.39974883862009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-27206393-2	3.37032996879925	0	1.40662340610854	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10522976-1	2.60445145821937	0	1.41002548646639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-6005001-1	2.6886439231629	0	1.4115455988917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74853860-1	2.61363966333885	0	1.46893506249107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65195700-1	2.98973204697204	0	1.43560211138502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141569140-1	4.70472264015091	0.215686081602187	0.939893997793251	0.229479156275697	0.818496519291249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	1.87786674940178
Merged-chr16-77315442-3	4.93003207417372	0	1.36608841493531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61224008-2	3.5868358246203	1.69707207010425	1.31882988318231	1.28680134697073	0.198163537347253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr12-4189245-4	4.16585690582663	0	1.37856972547765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5753229-2	2.75434675234016	0	1.48061527735534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79286246-2	6.66936840818578	0.250062132794467	0.871631330911515	0.286889793799591	0.774196705525895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3060951186802	2.07828143010348
Merged-chr18-61747005-3	4.37157461856902	0	1.37082112177229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101146313-2	2.9546829155903	0	1.41438417830847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97338050-2	4.29687380763045	0	1.37199542515483	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76622790-2	3.73123458186016	0	1.36781411588478	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-110668143-3	4.55084782763098	0	1.37698076535579	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140755684-1	0.655810017660702	0	1.90504808175087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24592437-1	1.36692175671847	0	1.55715335692025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135641962-1	2.20816323711531	0	1.5480152345824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39461778-1	3.54602859057832	1.05852627874042	0.987862955405637	1.07153150439351	0.283930512944159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.65059325603453
Merged-chr4-10915429-1	1.94445007049163	0.613541476142261	1.4767426176144	0.415469472353555	0.677798258480721	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr4-129494877-1	1.71556327350194	0	1.49051649768758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170329310-1	2.38265543489761	0	1.41965040973509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99500407-1	6.07795945029106	0.0252791537504247	0.718344845707762	0.0351908333462294	0.971927571635467	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97817938885471	2.59402064817223
Merged-chr17-13681098-1	2.60369518670681	0	1.41936815488881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91995774-1	1.92417278755084	0	1.5987577791623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25031376-1	2.23649810040699	-1.27759552814444	1.2547832066522	-1.01818028912987	0.308592284876627	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	0.600815099743027
Merged-chr12-73675539-1	2.36702017523282	0	1.43716704490457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66909429-1	1.67317555620257	0	1.47573906641815	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153704941-1	2.18472344506702	0	1.51071870987307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83108799-2	5.30645117565158	-1.57195035104407	0.766638129040662	-2.05044634684572	0.0403208944068589	0.509864723655043	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87793383052892	1.76831516661334
Merged-chr12-111505108-1	2.37143983496194	0	1.49904672775356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49745175-1	2.17650263792852	0	1.43647378139634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85523868-2	2.53291334820972	0	1.42732989432028	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101604640-3	3.54054717505959	0	1.41815453183625	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64337680-1	2.1970398453739	0.329325228559145	1.59849806551319	0.206021662249192	0.836773990236871	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	0.897114879832661
Merged-chr1-156655248-1	2.35133148537575	-0.325409540598965	1.36073452889912	-0.239142561379869	0.810995039833131	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53854069364522	0.815775955292901
Merged-chr16-31526822-1	1.45903266217485	0	1.84736303698146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71526839-1	4.18662792782279	0.24951030582415	1.04660086296629	0.238400630701741	0.811570378297491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24621868818842	2.45069810784924
Merged-chr5-73571893-1	1.7796234553125	0.126652528526102	1.56395923202104	0.0809819884898371	0.935456276555273	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98088044523647	1.67279875369265
Merged-chr4-145201010-3	3.83481277138643	0	1.38079564005127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111051479-1	3.44190303392307	-1.06052713337467	0.814941974624948	-1.30135293848712	0.193137674530671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51992777837383	2.9670669471077
Merged-chr17-10312183-1	2.26300433591128	0	1.40871809448129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43872416-1	5.93244678059317	0.0104521427530294	0.731170620122672	0.0142950803347046	0.988594564555658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02134852814165	3.06160529496937
Merged-chr13-112813880-1	3.60980519263649	0.253421588666158	0.957465163431499	0.264679696290892	0.791256219841588	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60308582214967	1.53935718689701
Merged-chr6-84049091-2	1.91331409949824	0	1.54543191487937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76586128-1	1.88274032442748	0	1.42576479417838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41322194-1	3.88003147667523	1.1259993369632	1.17098748975819	0.961581013299911	0.336260112709681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.07599819202159
Merged-chr2-61454577-1	2.15159885542687	0	1.43596994149473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-98232943-1	1.4676973457767	0	1.48759829810007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79713507-1	6.61935505897442	0	1.39036150029159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58289454-1	1.66596652516869	0	1.47226147786306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52833343-1	1.6753122426931	0	1.64929657956482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96736849-1	2.51524514838538	0	1.45356709860048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93762799-1	1.23655302885943	-0.674466358107761	1.55452577860151	-0.433872739450181	0.664380856562344	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0
Merged-chr7-101615731-1	4.56554462783785	0.460259683909908	0.811175876376681	0.567398140543544	0.570443712932476	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84001395625789	2.42698818581862
Merged-chr6-137724059-2	3.04943311419324	0	1.38252217418984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-95831616-1	3.71857758845209	0.970795633718366	0.941563617343492	1.03104624672876	0.302519133188843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31898885959138	3.7602293221227
Merged-chr16-45110967-1	3.74287834727131	-2.56789035683719	0.985387001973038	-2.60597141193816	0.00916141077871291	0.189283591227691	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20604946077159	1.01477727114168
Merged-chr6-24961504-1	1.67421265195918	0	1.45022709892135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32581628-1	3.10773045852866	0	1.41861065187673	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-45819599-1	1.80730069078014	0	1.44117661234448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-111045679-1	1.20819537767291	0	1.5363394019568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36031452-1	1.60479165982763	0	1.6968944196494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105953645-2	2.15205046147661	0	1.44146041333946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32238276-1	8.71252874332701	-0.321548456367529	0.579018541473086	-0.555333609092163	0.578666494434682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94329641859423	3.42161383144518
Merged-chr6-28822324-3	2.72329265746705	0	1.42567608252948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65355649-1	3.33319540928179	-0.761679048075373	1.05572965784337	-0.721471678300033	0.47061935974054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80375881310702	1.08976818821237
Merged-chr17-55207114-1	3.29078842119278	1.46305720676886	1.02982130782883	1.42069036214973	0.155406795619096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30095837608674	3.84127096503767
Merged-chr2-165062662-1	1.72681428438754	0	1.65921141579248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83582239-1	2.74274005522312	0	1.38443604598777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-86464937-1	3.58580541585709	0.905942201123188	0.892825363587935	1.0146913809466	0.310252963962499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	2.72495321184227
Merged-chr2-163858698-1	1.66952692159381	0	1.46915079125256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99688997-1	2.09413720692103	0	1.48165398882717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40064682-1	1.32584491937517	0	1.72826282379605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84404881-1	1.45593615725443	0	1.82867222661072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9187925-1	1.39281956231616	0	1.61369002794693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145825854-1	2.6617276217035	0	1.40246755853157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69418705-1	1.5991754001416	0	1.89019721154076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25765892-1	2.24381123079333	0	1.56818705838288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93785986-1	1.68909497348453	0	1.5493075488423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36533464-2	5.61640279088207	0	1.35828236290042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13665875-2	3.56995922347917	0	1.40611529429538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44355076-2	3.55775461880423	0	1.41223192588234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111693400-2	3.76493896051857	0	1.38535538330971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81118972-2	7.13197922896132	2.16733764733437	0.7679845548454	2.82211098343073	0.00477086638006299	0.119127021384402	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	3.98865615503614
Merged-chr4-116656237-2	3.40781406725207	0	1.39986147833352	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-95397362-3	3.33049521553254	0	1.3785235168231	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127225805-4	14.1470286241232	-0.137962838765794	0.525920957533683	-0.262326185692947	0.793069975450295	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65255683846504	3.67391690907941
Merged-chr15-64092001-2	2.698422151554	0	1.46879632761466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67950946-2	2.78842974017567	0	1.38386969618194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83867183-1	2.31780600584493	0	1.4295443181981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65303784-1	2.24541230532622	0	1.42561888957019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118858747-1	3.17875821662345	0	1.42048762665834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136513834-3	5.83558158020604	1.44320717100669	0.867353742120397	1.66391992208221	0.0961284332112456	0.88777531446315	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	2.40283652402087
Merged-chr7-98071665-5	9.67706953896238	-1.16988257846528	0.5170165381454	-2.26275658929941	0.0236506982824602	0.361639467773912	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2169707692077	3.01798112039688
Merged-chr1-24472159-2	5.07704444683802	-1.04058298260951	0.771510889356205	-1.34875994229691	0.17741408506792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17544994694631	2.83220174686727
Merged-chr11-74664501-1	2.23941512794004	0	1.53349716671041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21369608-2	10.8679431189282	-0.225803714526499	0.550894483743841	-0.409885597314303	0.681889871127163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.05755118075239	3.25849985036018
Merged-chr14-63413091-3	3.15774039370704	0	1.4016091834831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55818427-2	4.44604642353556	0	1.38058923530328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106354595-2	5.23858813633752	-0.140061735892751	0.673538467823275	-0.207949126269504	0.835268690284492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58881652880072	3.45475328119817
Merged-chr11-83739406-2	3.22861314340012	0	1.38150959175131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86204535-2	5.84126554793831	0	1.37168150215532	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-23601723-1	1.62776684253593	0	1.51394105964958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59848231-2	5.75923857270515	1.07221701724392	0.904288293930059	1.18570263978983	0.23573975169612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09927897987273	3.33700718126192
Merged-chr16-13294375-2	2.79438778027752	0	1.40463175003633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30580552-2	4.86005384302061	1.95049718336146	0.742783311897458	2.62593027080653	0.00864125174189758	0.182632116422166	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84016081186083	3.88869750077239
Merged-chr14-43984065-2	3.16288114017417	0	1.38762712400736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36010744-2	5.1860158122188	-0.322381382559269	1.04705345510656	-0.30789391027458	0.758163059749903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11739424870847	3.67703411596376
Merged-chr8-18946102-5	9.13520998246335	-0.0548696961429203	0.623150464460829	-0.0880520825582556	0.929835280962582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86487465827321	2.87690363630759
Merged-chr13-76255330-3	7.10235746395758	-1.39596336120474	0.851454895945282	-1.63950359302937	0.101108422993812	0.916636551954743	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18631306001322	2.40064175341811
Merged-chr4-149049042-2	5.79059638521916	-0.0367001273738051	0.889312795057112	-0.0412679628335362	0.967082273258074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.40024388691264
Merged-chr3-79846796-2	6.89205316147883	1.64141377806522	0.630161323782917	2.60475169788534	0.00919408630341368	0.18967033676177	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4073789078553	4.33182275232304
Merged-chr1-60668482-1	3.48002396121523	-3.97250198072561	1.12123067087358	-3.54298369097461	0.00039562716844673	0.0180570086058739	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88854826306555	0
Merged-chr6-87876378-1	2.93681788113716	0	1.39294549093624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129346739-3	3.49629070304472	0	1.39953177961559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21811493-4	4.37107486574669	-2.59245186487517	1.18902969373353	-2.18030876649927	0.0292345816834512	0.417103051372893	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	0
Merged-chr11-119503879-2	2.77701917200846	0	1.43063900921146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44696276-3	3.37659783785258	0	1.43099677344119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116632298-3	3.8126774642852	0	1.37956151443816	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121877272-3	3.58309412037003	0	1.40774988092913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34779518-3	7.20418812721497	-0.305947219301289	0.772452523649744	-0.396072522173565	0.692051528383367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77720628303105	2.55180440829856
Merged-chr7-109486487-2	2.90133521437114	0	1.39496347993894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134202242-3	4.12823340586077	0	1.37922105833081	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21355756-1	2.59190188709706	0	1.41960659070941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100458778-1	3.76963341914287	-2.31769507221523	0.895824512334777	-2.58721997478574	0.00967538024124916	0.196614577395912	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85674041723695	1.3019284004821
Merged-chr11-67637303-2	6.46707872841092	0.265956109329959	0.658602595903378	0.403818799051586	0.686345971416147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54204578080207	2.92973840461789
Merged-chr4-135411829-1	2.91710843029987	0	1.41511457934916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122731523-1	3.31524400858211	0	1.37161725500911	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134541096-1	2.20908548721039	0	1.46701655816271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-14988068-1	1.44657913730341	0	1.64379887780609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115077957-1	2.32324387980608	0	1.55622303732451	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114792065-1	1.49462882290766	0	1.48235888329041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73517374-1	2.16914266320558	0	1.40434638426489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139350791-2	2.06934041098362	0	1.57410474228392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112449774-1	2.30096547238885	0	1.40368124735597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-50609680-1	2.11564390651874	0	1.41466528398809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69523520-1	4.35589844376041	-0.91929609195308	0.890679644982485	-1.03212877618996	0.302011794944891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49120428477706	1.75680118808515
Merged-chr14-48465146-1	3.3299380459108	-1.31206159664737	0.99138437098659	-1.32346407210521	0.18568109660483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1552264446993	1.13759034240505
Merged-chr10-44702948-1	2.41108108808315	0	1.50380252483159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169982153-1	1.14995993208916	0	1.86490271085652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-95745665-1	2.05764501884287	0	1.4300481899313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-87108390-2	2.68702167883547	0.585655512592761	1.39454710259013	0.419961083784842	0.674513883210343	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.716426531808663
Merged-chr10-4110610-1	4.35119377891302	-0.203621049050525	0.813987377548387	-0.250152587947742	0.802469349096488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12818198236926	3.43211601892386
Merged-chr10-115351157-1	2.8009033708142	0	1.41271490994566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120834554-1	2.82399178480052	0	1.39153217306731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109003392-1	1.69306805708806	0	1.4199670848123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63147272-1	1.22486890135457	0	1.6559786616401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80984423-1	1.20478108074551	0	2.43530236471376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-38709967-1	2.20203429533527	0.417736241736704	1.71364809839403	0.243770142847993	0.807408845404058	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	1.18984215491549
Merged-chr3-57663948-1	1.25426388430197	0	1.49573475316508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20508597-1	1.8574460006496	0	1.4681741297531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36470696-1	3.05463529192647	1.35736869038342	1.15595961003043	1.17423539594752	0.240300752002365	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05629245276768	2.89812055202099
Merged-chr1-16122346-1	3.59298163214323	-2.98903641454539	1.16489223603795	-2.56593384527288	0.0102898451079202	0.205246684974412	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21565186750098	0.303163067301871
Merged-chr5-125245901-1	1.17022066399738	0	1.80179713178253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53104651-1	1.68670196395491	0	1.59096843810495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136028318-5	19.8414917254706	-0.0631179570379519	0.349486559620084	-0.180601958217121	0.856680018724667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.07908874868505	4.92915585527704
Merged-chr5-88500668-1	1.9917342846849	0	1.43180160520384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130899047-1	2.0974599838826	0	1.43536809058635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78596993-1	2.19551997727304	0	1.45669011416665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84530750-1	1.7035641908595	0	1.56581218629073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108691669-1	1.44048879188994	0	1.61347065094756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35093784-1	1.84781256159227	0	1.48330042420509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70836988-2	2.03478890275483	0	1.47978118848105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-88478237-3	4.31843952010758	0	1.39694413040072	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64578301-1	1.15679032639894	0	1.77204435607056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125480237-2	2.8875652006011	2.92883237109832	1.53933632675522	1.90265916563669	0.0570850334812632	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.48988962528534
Merged-chr3-51046152-1	1.8520853001485	0	1.59899467459527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-140269089-1	2.50124215868937	0	1.4229838886131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9154374-1	1.81249413339718	0	1.48689880029888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46794381-1	3.29580485489778	0	1.4242924435119	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44767986-1	2.78644753534082	0	1.4778239520267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-162701096-1	1.30364526224423	0	1.69419003875558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74629247-1	1.26120293023773	0	1.62228004430161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64538541-1	1.2611663925436	0	1.50608164671664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92060009-1	3.93165225531649	0	1.38202946270394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105445233-1	2.47986426497885	1.84723455350814	1.46635465837502	1.25974609413742	0.207760971486282	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr14-61648354-2	4.1581307898112	0	1.38315521941546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133815965-1	2.28332255597553	4.3528956150808	1.27518698976146	3.41353515212312	0.000641258854116545	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.87939879344989
Merged-chr16-57500155-1	1.76106916301588	0	1.67409897450783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102503447-1	5.43844678070342	-0.329161858633276	1.14406427276854	-0.28771273298897	0.773566642457794	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53535434291911	2.5807710169129
Merged-chr15-49229071-1	5.98557699971495	0.978562303233372	0.859945814020187	1.13793484110198	0.255147691465608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.193654772508	4.13235421697861
Merged-chr17-30972205-1	1.25431420137149	0	1.54096140658281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29268032-2	5.47028397691473	1.50678695997826	0.849231262635609	1.77429520823564	0.0760143327653421	0.769615033486912	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	3.31132004020755
Merged-chr14-104901328-1	2.10450645744585	0	1.46209627725325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32591289-1	2.60010088771465	0	1.47329818786558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120660645-2	3.3489378057777	0	1.40375403792256	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123353598-1	3.9116370437098	0	1.41119361844135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88290111-3	4.40308062863511	0	1.37276353561879	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3030176-3	4.87672316087202	0	1.39633649059592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-116476046-2	3.99021499019608	0	1.386951930855	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66899867-4	3.81713894948463	0	1.38888683582389	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59843021-3	4.07721779696917	0	1.37458528534291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88148489-3	4.45055737740841	0	1.38502592640117	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110866845-2	3.02136764187781	0	1.43059503830533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18622108-1	2.80755194252504	0	1.40484542736905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14273139-2	3.14820993063079	0	1.40964692938338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118862913-4	3.92056571174631	1.17797774552832	1.20136203347311	0.980535186485635	0.326822009726582	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.14143228603163
Merged-chr3-144043363-3	4.03044361117932	0	1.4149817877531	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-16319173-3	3.17222761180867	0	1.39720211173346	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40585317-3	9.65478471862184	-0.904000762851108	0.570895028875558	-1.58347982926325	0.113312140527569	0.982381921361746	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98705560212842	2.42118930067064
Merged-chr11-72428815-3	3.88105585987531	0	1.38019916402917	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-17740477-2	2.97414724652528	0	1.40841931827151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-88478667-2	2.70424940818574	0	1.43512152859662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35168960-2	2.69933700115721	0	1.38731491519043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119356918-2	2.32834937126009	0	1.45199549435822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141020609-1	1.87227912167261	0	1.40640838506797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142077176-1	1.97336439521526	0	1.45373023089731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68117667-2	3.23925355974902	-1.79238345261404	1.29521867259415	-1.38384621109896	0.166405549791566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr3-84769563-1	3.38022720173163	-1.38231126823613	1.24857422012708	-1.10711181278069	0.268245588873998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61477032079243	0.601513806634888
Merged-chr18-88774295-1	2.44800939237478	0	1.40815143572277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34428916-2	4.2562882426833	0.876724137816498	1.20704318027655	0.726340326628274	0.467630163381696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	1.10056930386922
Merged-chr10-107810812-1	3.11605328355989	2.77531077198388	1.56072334997835	1.77822083075926	0.0753675930120109	0.765750650741274	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.94927122251658
Merged-chr13-43032610-2	2.8488042140666	0	1.40871450016748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62719921-2	3.0069979714598	0	1.42240425246823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102825146-2	7.04278412611039	1.51846132681048	0.808148650113521	1.87893814658626	0.060252939396012	0.668426435230166	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45391938817053	2.32273095016315
Merged-chr15-96569318-2	4.65915132451802	0	1.36369536453459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24325885-2	3.43624465902483	-1.34163097350871	1.3581154327189	-0.98786225470011	0.323220113337323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr15-84845004-2	3.56989011911522	0	1.3839593264564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55473942-4	9.57080666522641	0.0266653901624386	0.651814422386194	0.040909481666301	0.967368058500173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46801699129062	2.24668184253909
Merged-chr7-29001271-1	2.34618984932735	0	1.43315068483458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71131620-3	3.81712034081685	0	1.38370016521913	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86637906-3	3.42822453423286	0	1.40306556853927	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102075125-3	3.59409248137212	0	1.36882533110474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123883812-1	2.88396541499372	4.32296757003671	1.22924561825922	3.51676467731373	0.000436840884968625	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.13740203858764
Merged-chr9-65666217-3	7.88584263296644	-0.0821090806206543	0.692109683537559	-0.118635936721724	0.905563793009726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87815767815405	2.42363136501877
Merged-chr5-66160600-2	6.03387744557657	0.239723816041173	0.901989325260843	0.265772342673621	0.79041454472949	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15841814526637	2.29168133223502
Merged-chr5-136251200-5	11.0770677575968	-0.32988323307277	0.574500231439131	-0.574209051659402	0.565826344803658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19077837110562	2.93705681809668
Merged-chr1-61187567-2	5.26320512651835	0.105657429333827	0.833320443033418	0.126790876447501	0.899105916997738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38403867470374	2.50006256765198
Merged-chr18-24045857-2	3.69927384388078	0	1.37865173333103	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129186272-2	5.22172269702206	0	1.37754218371733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44061045-2	7.31667933949505	-0.328279586250353	0.693041565221113	-0.473679505998484	0.635728469828589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60016286176753	2.40938238731737
Merged-chr19-16178749-2	4.82357897599516	0	1.3979487466769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146663206-1	3.86788029260437	0.732909260662794	1.06425191370957	0.688661444928159	0.49103634412511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.21469436624079
Merged-chr1-131765764-3	12.3489738173746	-0.0890444111308315	0.453250759204512	-0.196457279601938	0.844252266996748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.5105579095718	4.47971925054976
Merged-chr2-27281171-2	3.13182990953383	0	1.40263668996776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79794394-2	2.77036990272453	0	1.38012860123057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23100756-1	3.37815155656441	-1.52501972862293	1.00526993851853	-1.51702509961688	0.129260347081277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84027597956335	2.15306841387519
Merged-chr3-75321199-1	2.28445708442718	0	1.47277567429456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10909938-2	2.4284258632723	0	1.43071668012515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27968135-2	2.79819067704125	0	1.41819314897657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15621205-1	2.13599517411664	0	1.41394929746831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156724306-1	2.23899016030262	-0.510496902725739	1.39254690491528	-0.366592249728777	0.713923190162045	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82413829516899	1.53220248710156
Merged-chr19-29420668-1	2.27284027446417	0	1.42823912314328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100506045-2	3.92495197808848	0	1.40747586946995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122445768-1	2.34789968547816	-1.81671925103467	1.2505701804227	-1.45271275412997	0.146303524313512	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52241198578051	1.03838943879457
Merged-chr9-55166892-1	1.60210808640638	0	1.57851969954998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-38472451-1	1.40019201135675	-0.293921615702526	1.84869578824855	-0.158988632727392	0.873677829685777	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.577068348605183
Merged-chr17-44055887-1	3.18889610247265	1.33532419893487	0.97343062046	1.37177131155362	0.170134640752729	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38353752608252	2.98274244004453
Merged-chr2-57288216-1	1.86268838986241	0	1.57110433791145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-94477207-2	3.48361587390864	0	1.43415218195851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93103144-1	2.89589300592903	0	1.44177179767166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20781425-1	1.74319992352268	0	1.47344665816954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24616597-1	2.42375449641154	-0.478841425141019	1.42490159083642	-0.336052277729536	0.736831444540234	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06806339973931	1.51436894928421
Merged-chr1-78895467-1	2.10187539731116	0	1.45919829225412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118606449-1	6.23578573067596	-0.0658440760115397	0.672775845970821	-0.0978692627059554	0.922036107590399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61443201731899	3.6810056070557
Merged-chr18-5536989-2	3.40437105203789	0	1.40199719375607	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-11328420-2	3.35920234559819	0	1.46990411467628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11793744-2	5.48895519390997	0.646099553876323	0.87416014029509	0.73910891619723	0.459840863116779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33009559628045	3.72424279369386
Merged-chr8-94966779-2	7.00672936942771	-0.0270309992920295	0.664603791684675	-0.040672351903846	0.967557103334914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58034178823742	3.23156941160167
Merged-chr2-164524271-1	6.5177639087974	-0.047675396795783	0.745670833855271	-0.0639362499258439	0.949020988047498	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32240838767146	2.46052538094855
Merged-chr7-90213725-2	8.33250603161751	-0.189728065821296	0.797683461146733	-0.237848814802487	0.811998356137429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36869737571727	2.17188157578997
Merged-chr15-63652701-2	3.90329251258671	0	1.38626645158003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45296723-1	2.01995300968014	0	1.47504708157489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35480946-2	7.60397249829064	3.55859808132417	0.972760610220018	3.65824648319106	0.00025394676447808	0.0126877685388456	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	4.16938981168963
Merged-chr8-83171521-1	4.97320482654735	-1.67313030013353	1.2221752844684	-1.36897736470042	0.171006350524075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48445201869237	2.23014795278938
Merged-chr3-65603468-1	1.75957700501817	0	1.63005310173369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-23048234-1	2.28500272743183	0	1.42778838661172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17252357-3	13.0368868189707	1.10225515972327	0.546876097876269	2.01554824576125	0.0438472362654769	0.539862268664792	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06438112643223	4.93250297025769
Merged-chr18-9399550-1	4.43278368104982	-0.478916013695017	0.893557850941967	-0.535965313482675	0.591982523276202	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93317259409221	1.74618975104912
Merged-chr10-81300310-1	1.7547399313779	0	1.47294087612006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102537894-2	2.99415481399584	0	1.47669772775841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61761951-1	2.52267208230025	-1.92417566611009	1.3759388762088	-1.39844559913291	0.161979298124353	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr10-37233067-1	2.20392489843482	0	1.48373946101179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-54924362-1	2.64347104935461	0	1.42320814403061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36700658-1	1.14391589203632	0	2.42528403419244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103505018-1	2.95254010311384	0	1.40448909278087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36053805-1	2.96725395539726	0	1.41026725128372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93761840-1	2.86871824429203	0.55221469949044	1.13632516971501	0.485965385796158	0.626991707874002	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46316345736407	1.86501351763573
Merged-chr14-70833952-2	3.85836886799668	0.746293832240416	1.02948369231019	0.724920499290001	0.468500804110012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.79061031525623
Merged-chr7-142057007-2	2.66061203757928	0	1.4478187078393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45006580-3	8.44187580702203	1.35077243582751	0.725806064444144	1.8610652376706	0.0627349645322083	0.685882931819451	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73830414206781	3.02423513873956
Merged-chr13-9134279-1	2.85081778561803	0	1.47146090608839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126124347-1	2.37934739496952	2.70302612914884	1.2486162251337	2.16481739924484	0.0304016718187375	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	3.79675422230604
Merged-chr11-45544816-2	5.64984697532557	-0.0186405480421881	0.895883988177528	-0.0208068771048225	0.983399711791283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.56533893459231
Merged-chr18-53224422-1	1.4298404245338	0	1.65138897964526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124170977-1	2.38995293941747	0.941432249755922	2.03855812721388	0.461812806408707	0.644215566351241	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.41651819867208
Merged-chr13-82027002-1	2.81357809852465	1.17919038932538	2.24148796241982	0.526074825783304	0.598836218944442	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66210910851734	2.75951170759449
Merged-chr3-145628068-2	2.7080176524362	0	1.41486450380746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57065474-1	4.1632560320062	1.12957470510647	1.26818947348666	0.890698691892555	0.373090836758553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr14-88763526-1	4.24943722062021	0.44107903908899	0.930922652099254	0.47380847172893	0.635636492816527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79557489340392	3.07735759164726
Merged-chr11-67742144-1	2.18001593764543	2.86988909283211	1.47341755057188	1.94777718761271	0.0514416295364219	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.95515850342639
Merged-chr4-9689537-2	4.95200837321488	-0.907780506782494	0.920712086115517	-0.985954806580653	0.324155290494341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80442813729532	1.39949824061849
Merged-chr17-36193820-3	5.50710067581856	0	1.35639291985564	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116429103-2	3.1713231032562	0	1.38205828500149	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167962514-3	3.53149004534516	0	1.38804050655213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54617846-3	4.1807282890003	0	1.41272598929468	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128201035-3	17.6738809124043	-0.200593005218318	0.354740042144874	-0.565464795024174	0.571757663329463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.68583757085218	4.38783915180369
Merged-chr13-64344343-2	6.22364874917919	0.830318443260957	0.783551809650027	1.05968543883756	0.28928772941042	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30999519426894	2.53769180571302
Merged-chr6-95098585-2	3.68473655081053	1.11919703696156	1.29448572187569	0.864588166596277	0.387264869743522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.67591700901439
Merged-chr4-107777196-4	8.9486187276244	1.47088664845652	0.62898723436589	2.33850000141798	0.0193613255979802	0.313232826839466	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70252588433993	4.02111978143126
Merged-chr17-42909922-2	5.69830171025665	0.245880699596674	0.953479604449313	0.257877251332171	0.796501642023121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43393032742955	1.97596182099452
Merged-chr13-5800062-3	2.68285799465299	0	1.38749466951407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99324851-3	6.52609963521439	0.292135239049816	0.908111856015324	0.321695215313747	0.74768360295804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89807913501705	1.98022358911587
Merged-chr7-145149100-1	5.54930869970304	0.311595305985282	0.76325761564564	0.408243952759912	0.683094582574197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76620369058164	2.98058841101479
Merged-chr18-77869778-1	2.60267136360938	0	1.42302425018816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33973616-2	3.5604855383433	0	1.38282814399421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3739288-2	3.71176434930995	0	1.38348134692573	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100826797-2	2.90473108170657	0	1.39714767717108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29322893-2	2.08098144627616	0	1.50671460683174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27692857-2	3.13466192607689	0	1.37769230932871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88132093-1	2.69775644385187	0	1.39346192078518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95390447-1	2.42585748887009	0	1.39131270738343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75596629-1	2.35605129484287	0	1.41418967210208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69594222-1	2.24900642389696	0	1.45453843237348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27304291-2	3.0785282559123	0	1.43855011016439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67462590-1	8.39580340327137	0.481464327473827	0.609274414295476	0.79022574422489	0.429395943749655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24074086074821	3.66045619036265
Merged-chr7-45078630-1	3.58194555069093	-2.89226420227727	1.28124712553827	-2.25738200275937	0.0239842153054219	0.36397486314557	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0
Merged-chr13-45750199-1	2.42161711359069	0	1.38369381713395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17001260-2	2.38613074521622	0	1.4386373068121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82469549-2	3.56769812265458	0	1.41461558935239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37001400-2	2.69372398492594	0	1.40718224330558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45563872-1	2.27814154446389	0	1.44991485729904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128204974-2	2.01866256876827	0	1.57059830435017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32040347-1	5.14266620900175	1.46757467140817	0.99708633820897	1.47186318292588	0.141057827446664	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69469308021391	3.650147106218
Merged-chr17-84203392-2	5.19034559845051	0	1.42476731908025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10546135-2	2.85311696364422	0	1.41168663224117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74683609-3	7.66542860567425	-0.177868754727653	0.724555358773368	-0.245486770022342	0.806079550822688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66706078274458	3.37243856893378
Merged-chr8-46951915-3	4.80185741689542	0	1.40725693891196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78649171-1	3.26654734054082	0	1.42333079427157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27664761-3	3.28197686741171	0	1.39939373946458	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118908401-4	7.65361485699482	0.833799488673719	0.757107222247257	1.10129644015127	0.270767660012987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99578006370328	2.91806575828103
Merged-chr11-100629669-5	13.6837334177904	0.216757302280135	0.445388824374545	0.486669827390763	0.626492330710515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.49131459850628	4.75432682803557
Merged-chr18-47734962-3	6.59612573057431	-2.56195823809449	1.04293179849282	-2.45649642843077	0.0140299196749491	0.25481202927182	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76579939914299	0.723581231604105
Merged-chr3-28026359-2	3.11873736646971	0	1.38362711908685	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97705471-2	3.41253142826125	0	1.40313144503397	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154040353-1	3.53810654618231	0	1.39433752713237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105044023-3	3.33828203681512	0	1.41693159137672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87176263-3	6.89332916620402	2.28510406858229	0.880973392583874	2.59384004990223	0.00949106303893292	0.193810930027556	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.63008074962984
Merged-chr1-57837425-2	5.75320641495651	0	1.38141689863907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19348114-2	6.34432708084149	-0.261127133547423	0.744526569820559	-0.350729099715485	0.725791592246374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49227199825724	4.01625218613892
Merged-chr13-67516183-2	4.25551044873001	1.21761759165983	1.38018708494263	0.882211987739651	0.377662180474005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr11-31819926-2	9.89670046936486	0.0962082790136004	0.613758208551737	0.156752736946068	0.875439722709101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30483543417642	3.36032150618399
Merged-chr8-117543144-1	2.33648259799306	0	1.45460897818035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-148906871-1	2.07800762917275	0	1.46873350234627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27755112-1	1.38109306946986	0	1.67001426324417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92142745-1	2.64525365130089	0	1.52146422744302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15861490-1	2.87058319584739	-0.558768092465573	1.26775855190755	-0.440752769227876	0.659391989662532	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40753896716966	0.841757702988201
Merged-chr1-54883202-1	2.21573680226919	0	1.41171735223505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91862311-1	2.20778085411941	0	1.45490638579307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97300757-1	5.35562425802549	1.60850054017395	0.893815079913016	1.79958984394232	0.0719254259082113	0.744336981522981	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	3.43697953330198
Merged-chr5-101970277-2	7.83250287869218	0.478020018979969	0.622260479726499	0.768199226134485	0.442368833197646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81146550482523	4.02720854039065
Merged-chr10-4105799-1	4.21151981310767	-1.45595888340822	1.05217574340454	-1.38376016795174	0.166431903312721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	0.723581231604105
Merged-chr2-110205053-1	2.23342908785573	0	1.46873248688196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165792936-1	2.3187837445944	-0.69162341505274	1.40845658041662	-0.4910505759774	0.62339067673279	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr2-69017125-2	2.70449958279687	0	1.39331606334567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3699511-1	2.52605711617929	0	1.52730433071667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13884766-2	3.34472130922068	0	1.40566965548776	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97871250-1	2.59757412600579	0	1.38627451253327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92421629-1	2.72197682367727	0	1.4346388078307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84061083-1	2.93647408317896	0	1.40049932418651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164933622-2	5.51329784197464	-0.536004031368668	0.77529317986041	-0.691356567157181	0.489341491429318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78052024733953	3.12775959205545
Merged-chr17-31492644-1	1.45961295460753	0	1.51909320617957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15938350-1	3.20689354379683	-1.06174030332715	1.86228621281373	-0.570127349932405	0.568591326311033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90484805568933	2.24626323229054
Merged-chr1-80627003-2	3.26535755533852	0	1.3758500780507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60478147-2	2.84741305890199	0	1.42606134947995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152740620-2	3.99408631892048	0	1.43324386471966	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127322449-1	2.84733471207306	0	1.41685422516048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120017232-1	3.72830832309026	2.49063551954083	1.05667199781771	2.35705642307606	0.0184204477649114	0.303889869515271	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22237730641564	2.61052303235677
Merged-chr7-63906676-1	2.03547251721656	0	1.44211250655254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66358799-1	1.52724466256587	1.78681227513139	1.70472750079635	1.04815125836634	0.294568923156364	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr7-123205498-1	2.82547833891039	0	1.40062884024216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48428628-1	3.71125982981827	-4.04506282688388	1.16295384788149	-3.47826599847675	0.000504668852822554	0.021516309153397	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83787160719903	0.303163067301871
Merged-chr2-16111353-1	1.76458562570766	0	1.51479713576824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141475020-1	4.17686294621582	1.40378194051277	1.01513763949822	1.38284887279586	0.166711209832734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	2.5934010793967
Merged-chr5-23908845-1	2.57248333335762	0	1.41676449840518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55662331-1	1.38332196580418	0	1.48637722547369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3908401-1	3.23549556311935	-0.0329312639848349	1.38660165240412	-0.0237496211891411	0.981052325166994	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr2-27018003-1	2.88182238511807	0	1.43994980411289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108263541-1	1.86662583153162	0	1.47213499657423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136548998-1	3.26137704119666	-1.30876554700729	1.03423698288407	-1.26544067623426	0.205713401667931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	1.02186287315087
Merged-chr11-16623832-1	2.31884742398726	0	1.45846439590687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60897089-1	1.73110413598103	0	1.60235217017541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99166634-1	1.74087972951512	0	1.61058583880812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8339756-1	2.74473627215961	0	1.39975268023538	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87545753-1	2.53337521330456	0	1.50003613022516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65423404-1	3.56922727740632	-0.814498060919173	1.12301679966505	-0.725276826813372	0.468282219116191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33919054069747	1.94654767864912
Merged-chr1-165735020-1	1.85870528667796	0	1.45554730200093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91269186-1	2.57159106932434	0.482090232624513	0.926212486866305	0.520496364992433	0.602717660785077	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	1.88803440763582
Merged-chr17-86249549-1	2.70774381965939	1.62782172900156	1.40001238603006	1.16271951965903	0.244943319306253	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr13-118478562-1	2.12916953835222	3.97178263888571	1.34619179938972	2.95038392054257	0.00317379279909433	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.78830131245596
Merged-chr5-74961318-2	2.64698329980772	0	1.38453444670671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163590336-1	1.984411497316	0	1.45930161652609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39426913-1	1.33352022833348	-3.21687686775666	1.41834028248378	-2.26805718450251	0.0233257215137876	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75254783872319	0
Merged-chr2-79774610-2	5.43520813676962	0.318050442800918	0.777383487953074	0.409129403607962	0.682444699040572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24817298452201	2.41334929553521
Merged-chr6-134319402-1	2.91533099637487	-0.759002903378653	1.23083093609076	-0.616658942445272	0.537459707764943	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	0.67591700901439
Merged-chr15-65810952-1	2.20214717306316	0	1.48649209133891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115543117-1	2.22873694318153	0	1.46461370462569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72196652-1	1.3629926228825	0	1.50265225846956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-29561080-1	1.73867455582331	0	1.42589735473508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54911611-1	2.08446882717279	0	1.45152456089203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25433772-2	2.48221061479764	0	1.43301755245181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128343703-1	2.98482756277029	0	1.42210352904445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100590658-2	5.82267131228558	1.33289261183166	0.711216441904716	1.87410264062798	0.0609162794477896	0.673585849166476	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68598010415578	3.13157956823541
Merged-chr7-132304539-1	2.81822239614768	0	1.39792157063361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67612437-4	3.4306362926462	0	1.40610874645859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172324901-4	6.55414560555249	0.156472244752502	0.593823581593061	0.263499547008105	0.792165572652357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59064915293718	3.22417540611861
Merged-chr14-121991476-2	6.47736338786779	2.52586464365721	0.897563197626567	2.81413570691888	0.00489085765719549	0.121342825827243	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	3.57673543660943
Merged-chr1-180366584-2	2.65845032503082	0	1.41559652659049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125265947-2	5.32652524602766	2.03870476027712	0.980638929298037	2.07895556597622	0.0376214347212643	0.488639547851514	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	3.35557818355374
Merged-chr8-85456723-2	3.08486950005754	0	1.38534471296046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21275943-2	7.08416534342946	-0.725379383323065	0.885490572251632	-0.819183632275796	0.412681651891959	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	0.887876939341704
Merged-chr10-122738063-3	2.81053268124124	0	1.4419563405865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117577270-1	2.17614622038398	0	1.43957982030422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141565437-3	7.58113139843062	-0.0903125128321462	0.606179208455894	-0.148986490417903	0.881564293070788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04531397392308	2.68483804261906
Merged-chr11-121652664-1	2.75659452383818	0	1.41525706220194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58354188-1	2.34321908344922	0	1.45720723777293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87414047-1	3.31989095153917	-0.406290814103515	1.29422692424218	-0.313925484390161	0.753577634350234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45795114796949	1.54667940924561
Merged-chr1-88424801-2	3.37923359165441	0	1.38214538734991	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66469469-1	2.86332983165416	0	1.3865177485203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149806865-2	4.48235119374307	-1.88528451836332	1.37447693446456	-1.37163779987166	0.17017622040557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr5-64354932-2	5.69975850110766	0.307280782506171	0.854058871847408	0.359788760043549	0.719005109289499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	1.70054887545773
Merged-chr8-36148892-1	6.61839717222609	-0.150890571937317	0.988866639380325	-0.152589404807783	0.87872208088703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20662832430543	3.12807380126906
Merged-chr17-73395371-2	2.60568499865083	0	1.44892084989961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165901263-2	3.69187812294795	0	1.43004288581624	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8762394-2	2.7609899753359	0	1.41137304997404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92936941-1	4.66044884898352	-0.830298524203229	0.82594554873339	-1.00527029351573	0.314766715328302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40748451440342	1.92769633709822
Merged-chr5-147435537-1	1.53755759526159	0	1.58010267774603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76525141-2	3.18451122074022	2.11199001323282	1.2630126958524	1.67218430991895	0.0944879834473989	0.878211796813822	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.990331813111976
Merged-chr6-134266946-1	1.99141113143159	0	1.55358998012092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46430426-2	2.90964349848243	0	1.43283185292145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-3293672-2	3.1479270741723	0	1.38514067006155	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30624070-3	3.88955648231386	0	1.41455174344508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17646217-2	5.27309118339509	-0.41256002964407	1.07574879623788	-0.383509636345287	0.701341926681301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29281866668399	1.09266895777963
Merged-chr8-25089753-2	3.65115684327513	0	1.39428541468281	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112951683-2	7.86833377012159	-1.67811009799796	0.695767460877784	-2.41188355644118	0.0158703492107918	0.276328095051068	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67887106930069	1.50481947192803
Merged-chr5-125330304-1	2.62159486990376	0	1.39057112650768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61193580-3	3.58669300339971	0	1.40464528538753	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111295517-1	3.34149338409252	0.767443355080943	1.16757975190814	0.65729416241309	0.510991789312346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	2.11005512232597
Merged-chr13-62470121-1	2.23963616808361	0	1.42715025229157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-89270713-3	3.70797208361688	0	1.39003649518328	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78018924-3	4.02757678531339	0	1.38516396753833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143903744-3	4.80605322075711	0	1.37643206105662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97394327-2	6.66157975272114	1.43451118502899	0.79113693292591	1.81322742666513	0.0697967513289056	0.730896090442685	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.56275234502369
Merged-chr2-151575693-2	3.37280930533826	0	1.40271279446435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114831620-2	3.08690693588977	0	1.40892820718771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89308291-3	4.13745186921487	0	1.38211305283401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87107772-3	9.4275484109711	-1.86368941909775	0.637914754103658	-2.92153364867136	0.00348312648596907	0.0952890149223919	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25679707735132	2.15203663810895
Merged-chr17-79015139-1	6.23597035215858	-0.617293700084394	0.700521540689444	-0.881191604011007	0.378214122849913	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62941356968037	2.45596500227787
Merged-chr1-36053239-1	2.65882300423476	0	1.51357292048446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165900342-3	8.14414240193774	0.385624452089255	0.747350991677414	0.515988412919248	0.605862502015782	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86771754965002	2.70616001322591
Merged-chr15-72831544-1	3.43786134203906	-0.583525981690863	0.973544115826289	-0.599383194048273	0.548917381385207	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39791575814421	2.08990416182602
Merged-chr15-50885670-1	2.22581625384176	0	1.59355019416072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115503598-1	1.47960939938813	0	1.78961424054727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83785632-1	2.64842278255692	0	1.43288255953034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91732971-1	1.69624394507922	0	1.46462224251866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40596439-1	4.25926747855369	-2.18653244697502	0.990549757030536	-2.2073928456959	0.0272866257693636	0.398087410144079	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56449049229855	1.40373237117109
Merged-chr1-171579742-1	1.57906240332976	0	1.50200871699352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92712620-1	1.74156143053748	0	1.74861227415343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-56751724-1	2.49664358445393	0	1.42800733933646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101919834-1	2.03798698749782	0	1.46955035465025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12497251-1	1.98812755078363	0	1.44969258903046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157480334-1	2.45890329077298	0	1.42342099202341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73559851-2	3.19317199423341	0	1.40570261080869	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-44146137-1	2.27093042175881	0	1.46109318274654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22190689-3	3.55701754349236	0	1.42101689854557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67907225-2	3.8744218475633	0.441898795409246	1.31736827195661	0.335440593808228	0.737292750485986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr17-47743528-1	1.77560811916477	0	1.51971121031677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95582312-1	1.79229023287998	0	1.55738489288374	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47080831-1	6.81046080537569	2.72773351918467	1.09047527705407	2.50141711286997	0.0123697394050904	0.233625451173492	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.16054816670735
Merged-chr7-28294675-1	1.58616613238177	0	1.48296287548553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24856253-1	1.39593558897709	-2.3540114662475	1.32767222120667	-1.77303661901431	0.0762226391729947	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99654999675826	0.303163067301871
Merged-chr1-167212478-1	2.91055048846778	0	1.38290370702432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47719143-2	6.55234574486258	-3.55658937219235	1.10642968806691	-3.21447391601199	0.00130683787527558	0.0444841101933385	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58321107267933	0
Merged-chr7-46739193-1	1.6678827847993	0	1.48602869102342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38289690-2	3.70979281531521	0	1.40851256066653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121336303-1	2.2858209609971	0	1.41352220216804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77821103-1	3.02597913913428	0.0122603982504219	0.985738605289986	0.0124377783163064	0.990076344573543	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38601560292234	1.44790810950236
Merged-chr2-129584416-1	6.17111475452878	-0.0542835082327545	0.797054041611635	-0.0681051790704101	0.945701907629792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68120317153615	3.34071317369669
Merged-chr9-45274358-1	2.60060805560301	0	1.40030088948922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136681984-1	4.95392663597028	1.65331659974845	0.836995926240767	1.97529826360572	0.0482343101834176	0.576130271865611	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38860239282551	3.25013509069802
Merged-chr9-41138494-1	4.35836634446813	-0.612342513027182	0.698013073909931	-0.877265105647857	0.380342660678517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63433742123585	2.57779486076395
Merged-chr13-60608632-1	1.9967039365387	0	1.43519676511417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163048145-1	2.21728169392968	0	1.47953888181553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93361931-1	2.32887693002087	0.494225205652222	1.17338204858144	0.421197176358472	0.673611106068358	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15658857927843	1.39479953640345
Merged-chr1-159753849-1	1.19119881307865	0.454773710501657	1.82607348916369	0.249044582926361	0.803326295409771	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.878778741524029
Merged-chr12-99306452-1	1.78477023271271	0	1.43773884619195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54479506-1	4.98988324274091	0.00199893714475529	0.922256256319219	0.00216744221690962	0.998270632672734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00823083713182	2.06823506057597
Merged-chr8-46861352-1	1.90089128804985	0	1.47626949472381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41014354-2	6.30727201418011	0.946777235043415	0.828039295731659	1.14339650294838	0.252874003779111	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05631250707362	2.94949816363885
Merged-chr3-65801208-1	3.22777191549268	-2.76435837756914	1.22638036076625	-2.25407913075349	0.0241911902995241	0.366093795515542	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0
Merged-chr13-60826220-3	2.96981599101229	0	1.38911026615974	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142005554-2	2.81433718357615	0	1.40664850126566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129713005-4	11.5560427944673	-0.00225905802215536	0.50073539090953	-0.00451148064060748	0.996400371461317	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30935188919693	4.41149782560409
Merged-chr9-118821785-3	5.01597714521041	1.98509980658057	1.10184129549471	1.80162044633597	0.0716051421453231	0.741814056750294	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.48368994445501
Merged-chr7-67227383-5	8.50894138746652	0	1.41788078113681	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45453214-3	12.4606008445212	-0.491282655471225	0.618227524166641	-0.794663188335823	0.426809451054976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66812819295265	3.20187948698427
Merged-chr2-58933564-2	3.04565146999063	0	1.39674404207573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89009022-5	10.5090420054535	0.806319183629027	0.67937570374075	1.1868531347078	0.235285555820472	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54790569823016	4.0362200413034
Merged-chr3-50402870-1	3.39020078277887	1.32409592176393	1.23064416715371	1.07593726692449	0.281955313543255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.25841856379109
Merged-chr7-130762787-1	2.2248953290514	0	1.45305363760664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122553938-1	5.78349709098687	0.345693358214212	0.566839021352002	0.609861610073488	0.541953484985772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.98141255640769	4.30411543684149
Merged-chr1-165198234-2	3.825914118513	0	1.37085040535187	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82755212-1	2.7318464525527	0	1.42728584838219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68778115-2	2.50061864403255	0	1.43060009419584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-113437584-1	1.21901989542702	0	1.88438624942185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61938451-1	2.14274936918199	0	1.40053610941209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85286683-3	8.76430075956666	1.80989408182932	0.649874225472243	2.78499132738204	0.0053529154767432	0.129901398392984	C57BL6J_F1_Control-BALBCJ_F1_Control	2.278467196053	4.48991650271055
Merged-chr16-94269827-2	2.49358061450266	0	1.44439811604967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27702647-2	4.47060867097034	-0.0363791170589064	0.783277194618435	-0.046444754563074	0.962955765995923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97634481356229	1.95465925600843
Merged-chr17-24758291-1	4.0981129193885	-1.17660657160089	0.91764790666004	-1.28219828439797	0.199773097897454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32868649797447	1.52044370529506
Merged-chr12-3712754-2	2.50097698813642	0	1.46515058988462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65557183-2	2.55078396303817	0	1.44196704091362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26645740-1	2.07311552438207	0	1.55303875253877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79887160-3	3.53945047602603	0	1.39127808245024	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13517025-1	3.97043162667622	0	1.39915562189627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50584830-1	1.55760956334623	0	1.4996126154718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75071520-1	1.66520078020293	0	1.45684112395751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82999207-4	11.4905297809086	1.54583463331894	0.623785565226037	2.47815069712103	0.0132065352896584	0.244530023437625	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32345140313869	4.30174355826214
Merged-chr18-39453053-3	5.24501857459779	-2.79150392180627	1.17977252439024	-2.36613742403355	0.0179747709483292	0.299407067161523	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0
Merged-chr1-152560971-3	4.30982626384634	0	1.40839414650013	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110537800-4	12.3855144446272	0.219765826702058	0.458446275698459	0.479370949992422	0.631674756018332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03813496885157	4.22317878414483
Merged-chr10-13948329-2	3.26982650599753	0	1.39053483278455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28294183-2	3.4178298196026	0	1.37872282130357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48198566-3	6.95553862177111	0	1.39863641102445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20916635-6	9.70901560684078	0.142726810019694	0.541172034209197	0.263736484883698	0.791982979695774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63882497122968	3.3952413086928
Merged-chr19-10199004-3	4.03916785367551	0	1.37466777373717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3924587-3	3.41159072555751	0	1.43253056672888	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59181513-5	9.19626223240365	1.78080170306283	0.669736210637923	2.65895986326708	0.0078382300124459	0.170159083564915	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9498007700989	3.94835210749253
Merged-chr16-30970441-1	5.78664997802022	-0.449550853100842	0.921067635622832	-0.48807583256017	0.625496128563449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22909542873586	2.857109164655
Merged-chr5-123699373-1	3.11853632675239	0	1.37714677323341	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21482492-1	2.93091812815419	-0.969489243223961	1.77331836460739	-0.546709075241887	0.584578618356244	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27624770054806	0.897114879832661
Merged-chr17-27836887-1	2.45585885777279	1.50165841257891	1.27229297987598	1.18027721313474	0.237889978005258	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.94927122251658
Merged-chr10-77221327-1	0.942544480463488	0	1.92462558420192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97339322-2	5.72910025003844	1.44969055427922	0.873016487767114	1.66055346559037	0.096803161483873	0.892490341774399	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	2.40366870030388
Merged-chr1-173491859-1	2.52850605797377	2.34878465198506	1.33167164009818	1.76378664323878	0.0777679071069427	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.70266130792036
Merged-chr9-42150387-1	5.92491521136283	-0.321293978728192	0.766225382013583	-0.419320458797456	0.674981946577864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18601854658087	2.71112686564098
Merged-chr10-10555009-1	2.98430440967542	0	1.3790961637857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84896408-1	2.19697118810579	0	1.43937113566811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111638245-1	5.27422850505796	0.567356088117626	0.985550195230208	0.575674471846765	0.564835233472368	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.86774501229157
Merged-chr5-64812242-1	2.35324465220687	0	1.39161541855761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90592855-1	1.8978659649429	2.69192624545368	1.4244809909067	1.88975933174106	0.0587901548999849	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.60650301571838
Merged-chr2-68451528-1	1.5634295536549	0	1.49854735877042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140169141-1	4.25140173772049	-0.695988516245416	1.26175622054563	-0.551602999781087	0.58122038073306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09008352533139	1.737158151675
Merged-chr5-118636586-1	2.37542229300096	1.28580032181388	1.46964561749844	0.874905015538722	0.381625589847603	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr1-185209749-1	3.84803004912604	-0.252063282778667	1.14800617376496	-0.219566138701162	0.826209065260568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34574658350842	2.02173749792077
Merged-chr17-44092117-1	4.90749819612898	0.736568442499553	0.897999237158945	0.820232815375076	0.412083398147452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79257770822194	1.99711820367278
Merged-chr3-135206870-1	1.88081144390378	0	1.47953889356662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86833107-1	1.58224233504507	0	1.46066037467046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9104145-1	1.76219947698781	0	1.71373106984019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36998732-1	2.5542057720147	-3.8045592508582	1.22093571710564	-3.11610119808545	0.00183259370763687	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70594541242001	0
Merged-chr7-80434612-1	4.73095453335282	0.682815934800607	0.734445576346614	0.929702563118658	0.352525107034756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45925595033179	4.29770156326862
Merged-chr7-126907968-1	1.51861529129	0	1.45252424351608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74442470-1	2.71466031615482	1.71198449259744	1.29651360384167	1.32045239442509	0.186684020307467	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.45451904642141
Merged-chr12-102532987-1	2.08768683945447	-1.35801903807301	1.60714068603157	-0.844990765199465	0.398115995135983	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr2-114605453-1	1.61782499623597	0	1.48007214784647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83259981-1	3.33398820656546	-1.20005539373316	1.19143370475326	-1.00723639842108	0.313821185523579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82558198591041	1.3019284004821
Merged-chr11-17821017-1	4.67244676126951	-0.414406529363382	1.45462445633747	-0.284889015551682	0.775729171747416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35698538648192	3.43652480972064
Merged-chr3-52404861-1	1.21855839664453	0	1.51328512746603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116980685-1	2.15417414252196	0	1.43162953977501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-39989037-1	3.16700461433815	0.180076320133472	1.18904719307473	0.151445898179883	0.879623985460914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29592793539725	2.785449253536
Merged-chr1-142894315-1	0.948187878919506	0	1.59012024072844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136046189-1	2.82134716697026	0	1.38789517658712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87010629-2	2.62492055817495	0	1.3952442224498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75832927-1	3.38838740420927	1.72465390726913	1.07582463067576	1.60309948117271	0.108912692551488	0.960609324272758	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.85993237042598
Merged-chr1-59476245-1	4.00269325172469	0.861263961588799	0.96076059794617	0.896439720186209	0.37001796132325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	2.38790687071332
Merged-chr1-33769017-1	2.31018210602674	0	1.40568895399178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109124435-1	1.22247542853172	0	1.53243373384031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24647363-2	3.17030168252796	0	1.39562693699699	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38374884-1	2.18657522208692	0	1.45252890478002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151315962-1	1.02592125998635	0	1.68632873156526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40165134-1	2.49316220419626	0	1.43301521277372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39642561-1	4.58455972535038	0.23048575882293	1.00268310780711	0.229868995526421	0.81819356921493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	0.988408630094828
Merged-chr12-112849573-1	2.47381532154393	0	1.42373736032323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98708864-1	1.49359117634003	0	1.50170393301277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58907013-1	2.73967258366491	0	1.4626528013082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76483305-1	4.22216940424887	0.650352316264143	0.8344074196369	0.779418184640725	0.435733415244629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6995072319729	2.58934039553399
Merged-chr14-52338839-2	6.0191973086213	1.00489038315993	0.716322656647783	1.40284601336299	0.160662762491721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50670197153503	3.11946130525174
Merged-chr1-151035128-2	1.92916688084576	0	1.50845454652382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93429582-1	3.43342744359427	0.313657696318558	1.13411679727315	0.276565603359999	0.782113679339514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.02748994520012
Merged-chr11-54458364-2	2.99676604357703	0	1.43873771679213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16507459-1	2.20227769478554	0	1.43519749756504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94787325-1	4.82442541946328	-2.39063917741083	0.865003735495487	-2.76373277861215	0.00571443163442572	0.13594345261083	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21057179879772	1.74128181593619
Merged-chr12-5471815-2	6.62968591660013	1.15124106601371	0.656511589274032	1.75357310491159	0.0795036828398935	0.790845740852221	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97362884642494	4.12440085119015
Merged-chr9-99109334-3	4.14244828217443	0	1.39391420932043	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71654757-3	6.42089226029275	-0.385680159692181	0.820318280325851	-0.470159167413628	0.638241304556808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3105729578933	2.06654838432352
Merged-chr5-129977431-3	4.71288405952792	-0.651631300310656	1.34429443528498	-0.484738523947332	0.627861835750295	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.303163067301871
Merged-chr17-34619212-2	3.84375795918145	0.908911747056051	1.15904689091478	0.784188935047045	0.432929256767023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.66784418339515
Merged-chr10-82863408-2	4.30836208663727	0.283022036827403	0.851725701173146	0.332292469791126	0.739668425408966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.578845274708	1.92755195211066
Merged-chr6-140853745-2	4.0139395489729	0	1.3846002290395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102451248-3	4.53956194359295	0	1.40885121962943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69110492-1	5.48639046725036	-0.372562392291651	0.944715761287189	-0.394364535406956	0.693311923239167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30923017122179	1.62805269464997
Merged-chr2-79757210-1	2.68766089742673	0	1.46576468923484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-152333174-3	3.89015129725088	0	1.38339396863479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63931367-3	7.46727671705403	-0.649063431184758	0.69768204642764	-0.930314080042872	0.352208489814414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64337020473505	2.76430436369876
Merged-chr2-124617576-2	3.97804136794958	0	1.42318296240765	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40673460-2	3.06546201168376	1.20572789381747	1.52735845433623	0.789420381570785	0.42986634736386	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr5-117149262-2	5.87750493366477	1.44206143617314	0.795528353507167	1.81270903773029	0.0698767098143036	0.731592463173292	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31016258956889	3.28500933976479
Merged-chr8-26154052-4	3.85075460391243	0	1.39231230388034	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76657703-1	2.41424036305134	0	1.38982809754931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167268466-2	3.17016126309544	-1.31708384041884	1.36767830843582	-0.963007040687188	0.335543989988661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0
Merged-chr14-103717667-1	2.3656294886781	0	1.41734754689592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100465607-1	4.84865565071102	1.11582815029866	0.884448228529742	1.26160934501904	0.207089391850227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17585887006086	3.87057533548715
Merged-chr1-161400355-2	2.94283202591587	0	1.38658546841358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117853665-3	4.01582410829708	0	1.38614873609434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57791314-3	8.8355831845669	-0.117664746123805	0.642993189348717	-0.182995322614516	0.85480168866219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81959305960247	3.26727139169409
Merged-chr1-55739193-1	3.3542587105029	-2.30640193494732	1.36170977291788	-1.69375441141555	0.0903119602710541	0.853600254489945	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	0
Merged-chr11-51800917-2	2.99864957806269	0	1.4327429224976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62672436-1	1.02404542024205	0	1.6997676281262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128726577-2	2.78931772203772	0	1.41286016882894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67785799-2	7.20643559872389	0.491221989262403	0.637387389456749	0.77068043294844	0.440896372747188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05173154897999	3.53559159861058
Merged-chr5-67255932-2	3.2075034175829	0.611601855981448	1.49508398838708	0.409075249773261	0.682484438915013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr16-3233814-1	2.82191894348285	0	1.40579144293803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-56897844-2	4.3803539805078	0	1.40713735764995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77168976-2	6.83757356796357	-0.951144814556798	0.781377581064244	-1.21726657842081	0.223502805992389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40700426878372	2.06501871042627
Merged-chr4-129455516-2	3.22874552549652	0	1.39523619643508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36206123-1	3.07629227891269	0	1.43796958155803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180720543-1	2.8505595631544	0	1.41520794730865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84918580-1	2.2693130425245	1.43088589723965	1.50847764227229	0.948562880311731	0.342842977612244	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.06633037676026
Merged-chr6-72165915-3	4.44471817992784	0	1.38367004154904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113954619-2	3.06309050346838	0	1.42206682797567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182140554-3	3.6182221319635	0	1.36858188690838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77890180-2	3.90207509846835	-1.28061563738936	1.22377146924506	-1.04644998643364	0.295353324500719	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	0.55634759613363
Merged-chr10-41883867-2	3.76212844427833	0	1.39363059098479	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18625167-4	3.94473587229491	0	1.38945515044204	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64335760-3	16.5742902140415	0.185958196562554	0.523564601916559	0.355177175618512	0.722456862674114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82204494451794	3.97143213861027
Merged-chr5-9056238-3	4.24722063954331	0	1.36810243252971	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113436196-1	2.90381113967742	0	1.38952391181955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51515511-1	1.61949849445043	0	1.99563105814817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-69948927-1	0.901871746454989	0	1.72430288954313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87442423-1	1.64973937307383	0	1.49207934477783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164011173-1	1.62148324279085	0	1.44565710474288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135545261-1	2.59970404432978	0	1.45440464497877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37135676-2	2.21519919502673	0	1.55105476461604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67218119-1	1.18275567735899	0	1.53115937753421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75850570-1	1.23205490498561	0	1.63941541047624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63969529-1	1.23813349222929	0	1.59749511909447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119015512-2	5.51103982860653	-1.2247171774253	0.897622481740835	-1.36440118461617	0.172441335278756	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12600408403937	2.83135360506298
Merged-chr5-105154036-2	7.92782642893776	0.197524906040053	0.698445817385215	0.282806341055246	0.777325293228824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96006934525357	2.68642937419158
Merged-chr8-71707940-1	3.47441840224333	-0.117901063141879	0.954193354725592	-0.123560976984361	0.901662891498574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	1.38572824442771
Merged-chr2-70126856-1	2.00797852443248	0	1.42039008056882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32281707-1	1.96597411593714	0	1.42864010029687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43248697-1	1.41205394721698	2.3369003905564	1.51086852555913	1.54672650268598	0.121929209539402	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.48914397899119
Merged-chr16-16854977-1	2.33815360590271	0	1.43176167268482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122951141-1	1.77674824461791	0	1.58766391817594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95440081-1	1.39342142709909	0	1.90066640387803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96934881-1	2.08723807098228	0	1.53086096514557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-52426635-1	2.29381420396502	0	1.46031253999955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50171648-1	1.53524871790918	0	1.52268640725779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19370154-1	4.76120380263125	-0.0526618269360145	0.824187019130884	-0.0638954821098094	0.949053449683967	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	1.38950137562363
Merged-chr9-15715040-1	2.17372960318993	0	1.42460086366164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45765012-1	3.09379228977324	-1.94649564207792	1.21428136048007	-1.6030021586664	0.108934177507144	0.960609324272758	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0295486026821	0.55634759613363
Merged-chr9-64825363-2	2.06355318469765	0	1.56708530009889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29143102-1	2.67641759429283	0	1.53538303040008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85505956-2	3.0872993144441	0	1.43019252375237	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50991316-2	4.9444438247269	-1.33078836202304	1.34540644434845	-0.989134820643376	0.322597183099176	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr15-36763847-1	1.47707458462323	0	1.47363810122812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83094480-1	1.383285800149	0	1.66664911941495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122660126-1	1.27866167359081	0	1.60398064990622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-92632396-1	2.10476224509443	3.85350146795112	1.61740769013528	2.38251709290984	0.0171947337066215	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.23112039637829
Merged-chr13-54536004-1	0.990009856792209	0	1.7812699928814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93751951-1	3.31911703730589	0	1.40792295555427	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117140625-1	2.88717129507955	0	1.38853773325305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60410077-1	2.03815475491952	1.06534634813838	1.35702660991958	0.785059290916573	0.432418806450687	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	1.07599819202159
Merged-chr12-12255386-1	2.23739372147662	0.578816677681812	1.46338681449256	0.395532248855558	0.69245012663794	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.679405493272835
Merged-chr1-149893961-1	1.67449919123002	0	1.54198570800225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140419728-1	4.02299887930628	1.08474380695139	1.67084049810572	0.649220442155423	0.516195900433268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79257770822194	3.09085404244505
Merged-chr1-88263024-1	1.85759137461474	0	1.49846559706728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146675029-1	2.67275990344228	1.68212809740465	1.40730406182411	1.19528404915163	0.231976069679308	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.27029500171431
Merged-chr6-146855276-2	6.15116018222356	-0.374126575770443	0.645108701721395	-0.579943464988352	0.561952743366283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29482089062162	2.81334593156616
Merged-chr15-77624877-1	3.14254467633547	0	1.45267161526697	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5183416-2	3.39355560976109	0	1.42687841227412	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145478812-1	3.79787546226145	-0.206310683396858	1.1458240991721	-0.180054411096717	0.857109852270415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	0.988408630094828
Merged-chr15-101081227-1	5.40605797355635	0.409508300769793	0.613773551443156	0.667197698250311	0.504645861197234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79134090178313	3.0643546317135
Merged-chr12-24758182-1	4.60090146499463	0.269883739446191	0.695439818353399	0.388076340070947	0.697959540429344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03764928443927	3.42175821901047
Merged-chr6-72553727-1	2.32998327460894	0	1.46463572789756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62387767-1	4.71418222254019	-0.317703568796241	0.902716934824756	-0.351941518476017	0.72488212138179	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	2.06798974965677
Merged-chrX-35898855-1	1.62448451721972	0	1.66289395553402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58555054-1	3.0075959074794	-0.0382252292014993	1.21731061152525	-0.0314013768052217	0.974949443162303	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr9-37199949-1	2.95174905750486	1.1729822224851	1.3011906911522	0.901468347768788	0.36733935570331	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98033324113269	2.2317146605409
Merged-chr4-148632261-1	2.67473040697298	3.77211126015621	1.25277179331643	3.01101228514286	0.00260378317736209	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.78597213134036
Merged-chr2-168002147-1	2.46875569863819	0	1.39213856536397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21570357-1	2.13730565107602	0	1.5171028094733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131030440-1	2.51364669974424	0	1.43158757469592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-3234553-1	1.71040557473011	0	1.55289857015608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99237278-1	2.52644475900457	0	1.40754830723906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79254814-1	2.52266175055735	2.68398639807648	1.36689491777288	1.96356454558304	0.0495806123682149	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.69057178541104
Merged-chr9-106309177-1	6.0653913884891	0.779113700893418	0.67047998681757	1.16202379819191	0.245225798276726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07502756578827	3.90610894375474
Merged-chr12-100327004-1	1.33728887613736	0	1.64694598416977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67312824-1	3.02720334650994	-2.33761185923219	1.28669563619898	-1.81675587720007	0.0692545016265542	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06239241693004	0.465515277017237
Merged-chr19-11411760-2	3.21659112809911	0	1.40465107572156	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92788420-1	1.67782069338641	0	1.47270015987369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58918515-1	1.70458001073306	0	1.62369534419392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105161377-1	1.86924015880104	0	1.43089905676291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98991443-2	7.98067572360793	-0.165761823408455	0.521798537874809	-0.317673989819084	0.750732243067636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14694499545568	3.86660240061553
Merged-chr1-7937923-1	1.96404439105969	-1.25501932451757	1.55299670343551	-0.808127487805508	0.419017195211951	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	0.577068348605183
Merged-chr4-134677047-1	2.2621759933633	0	1.41717777116218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128057985-1	1.38193990245787	0	1.59987103042216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97305505-1	2.39829055609789	-1.02246272717107	1.20673829678497	-0.847294504446526	0.396830989033023	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	0.953310774576147
Merged-chr1-155903372-1	3.08506108364083	1.19567513291465	0.911067151677303	1.31238968578043	0.189388685187277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51134589925281	3.04376255728714
Merged-chr17-30197812-2	2.77412662876085	0	1.39467236928772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134634119-1	1.33232708828086	0	1.61353434967128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55830773-1	1.47183897733957	0	1.5235573555541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166441891-1	2.35165946917713	0	1.40179912494749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149451941-1	3.02308038301004	-0.908373846526706	1.41731940503213	-0.640909764800766	0.521581311210777	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.601513806634888
Merged-chr11-3335986-2	3.0222274962132	0	1.4584685289102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100425992-3	4.84901957665585	0.560141685183049	1.35046978872225	0.414775428418157	0.678306308838591	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.465515277017237
Merged-chr17-71874302-3	7.65277455095582	-2.04371226932606	0.765330008497964	-2.67036735347284	0.00757683019429836	0.165942349932258	C57BL6J_F1_Control-BALBCJ_F1_Control	4.352251234135	2.14165029359488
Merged-chr7-97210209-4	4.31226360175369	0	1.37485586159874	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109377503-4	5.46597622590687	0	1.36671542000283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153532390-3	3.68980516525861	0	1.38435481280922	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83082333-1	5.02138220633796	-0.261496284810812	1.04657181802191	-0.249859857018755	0.802695728177648	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97852517626617	2.40373656850996
Merged-chr6-98016091-2	3.99847949782218	-2.69860245411339	1.24400812283363	-2.16928041270861	0.0300614013778499	0.423616590017132	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	0.376242425970964
Merged-chr2-154736256-2	7.25055543986843	-0.625511171430001	0.588788681099697	-1.06236955890816	0.288067947644647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71793327318596	3.29804732329268
Merged-chr5-43897885-1	1.67362594901617	0	1.61615994342603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88953971-1	4.04250660537236	0.93835438170315	1.15291131082406	0.813899883619363	0.415702307380651	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.94927122251658
Merged-chr11-60803833-1	2.80851079924909	0	1.43259950814942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70233839-4	8.05863436407837	2.48237618501979	0.901853942680785	2.75252573342515	0.00591374985023826	0.13922283590693	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	2.64184831682362
Merged-chr6-53635544-2	2.20149199467302	0	1.58041267063709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-133393608-1	3.1149943302891	2.61740452183699	1.12481120536039	2.32697230376396	0.0199667393863192	0.319791392545941	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	3.92529157687509
Merged-chr15-83607678-1	2.47901279917941	0	1.39707261437264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-135793136-2	4.04819982458412	0	1.38749454508677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184063182-2	2.99496410186188	0	1.41083782468949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105311673-1	3.26354544929552	0	1.402710207265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59354677-3	4.15155031115704	0	1.40895114298163	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36271956-2	4.64252025028193	0	1.36986704917363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74975678-2	2.89540578578289	0	1.41903801113864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70817998-1	5.22550385177484	-0.0546578908377093	0.738457512503632	-0.0740162973661135	0.940997417407869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11190195371995	2.27439318040302
Merged-chr12-25294657-2	5.88555024206544	-4.06312144653287	1.13436226456363	-3.58185526216874	0.000341162800036657	0.016154415197903	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25834536218247	0
Merged-chr7-98712242-1	1.12994846714076	0	1.55238830776381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73534909-2	2.76541621108068	0	1.48587101473431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-9031910-2	3.424514532206	0	1.40575544825537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-71768028-2	4.40120306131893	-2.61336601543701	1.23233555315923	-2.1206610559416	0.0339503360339149	0.458852888231621	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0
Merged-chr7-109479253-1	2.73322849437911	0	1.40920003968604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73971046-2	7.40360920079257	0	1.3682164372732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122576512-1	1.50924096520233	0	1.54395826468063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123149095-3	4.20231349220526	0	1.37910809807941	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116964204-1	4.67543731770569	2.11466398310622	1.01694595769197	2.07942611611889	0.0375782021607152	0.488493508044166	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.78830131245596
Merged-chr1-170365837-3	3.52974475864996	0	1.3862173466719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55452118-3	4.13853481595084	0	1.37131398074982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38824070-2	3.69568324185017	0	1.45831086743408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38691529-1	2.65396287151684	0	1.40220725291787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125084109-3	9.25233096339202	1.96512494348548	0.669927258101927	2.93334077650933	0.00335335605380055	0.0928953824924017	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34353547422608	4.24231904825154
Merged-chr14-31664413-1	2.86245869160934	0	1.39222303569942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173437723-2	3.75637204937014	1.11572867615595	0.942345034440158	1.18399167542577	0.236416358119082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.62069611143677
Merged-chr14-13892113-1	3.06598694729816	0.878335285104419	1.18937697245949	0.738483513169187	0.460220682185095	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.41398715281163
Merged-chr15-50361545-2	5.83729069609439	0	1.37751187012538	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-116515321-2	3.09635360653223	0	1.37181457438384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110237716-2	3.54661739094353	0	1.37427779965157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68134276-1	3.44523045170725	-0.083876765126391	1.06427781806634	-0.0788109680598104	0.937182979935184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	2.05607979245859
Merged-chr1-157082212-1	4.92977888705592	1.21800189277866	0.89904219905029	1.35477722187602	0.175488545919366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9450324219075	3.40363227032843
Merged-chr6-34005891-1	1.54561571496229	0	1.45653246044403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89089776-2	1.80170976825629	0	1.62486004080201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113035940-2	2.77482194206567	0	1.40230203305995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62894303-1	1.85780352295741	0	1.43676281204524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75733931-2	6.41386199777484	-0.0612454939116324	0.674181037858611	-0.0908442843574559	0.927616321675686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52529140235815	3.41210027908435
Merged-chr2-155596526-1	4.02699126920583	-0.0698181577269652	1.04797813415263	-0.0666217695309249	0.946882814666499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11448286443977	3.73204710290879
Merged-chr7-81850418-1	2.02645994441812	0	1.44906499126549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52488944-1	2.85867653376716	0	1.41921851578396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84738348-1	3.78153006064691	0.291367316999832	0.78521830070562	0.371065367093458	0.710588845540793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48211543439749	3.14327507880701
Merged-chr3-137941876-1	2.23429315102276	0	1.45342317712461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-88200808-1	1.92803222861741	1.31220593347552	2.33739889802308	0.561395803936313	0.574527743892958	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30806904914164	2.82975479982226
Merged-chr14-69251496-1	1.6495048604522	0	1.57763156588253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91253192-1	1.8040712326773	0	1.52203079320512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87597320-1	1.94562576880386	0	1.42819581571211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85848392-1	1.53800179475787	0	1.54240708075637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17728531-1	1.37638985101676	0	1.59742979348696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91612129-1	5.95808194504163	-0.93117079426119	0.726463697028603	-1.28178572180535	0.199917824264806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94640134381309	1.76197067039868
Merged-chr12-13242673-1	1.79277177841146	0	1.55008243007357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54669405-1	3.26078489116427	1.8246156873954	1.35501340574898	1.34656652078424	0.178119882770612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr4-133579819-1	2.93514943770138	1.75540179365403	1.12435799767419	1.56124810539454	0.118465222701059	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68820016584178	3.63904366120544
Merged-chr16-75982224-1	1.56592942729059	0	1.52104015585837	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160267534-1	1.98906933485367	0	1.44724248888578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87247460-2	3.30396294566112	0	1.45700194139605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100458215-1	4.32792861062003	-0.425998925653456	1.01633196468727	-0.419153328297157	0.675104078746293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	1.20253745507858
Merged-chr12-17551396-1	3.76468513365642	0.138818457365776	0.967148625140198	0.143533737997769	0.885868668025975	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	1.83076147239238
Merged-chr16-30374487-2	2.49534371656486	0	1.4643467349412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100322992-1	1.99603380903269	0	1.53667528729294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18430361-2	2.37478409719677	0	1.43440830329551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-17007561-1	3.48528051479965	0.281260280088167	1.11840372755642	0.251483675490502	0.801440181805414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.03838943879457
Merged-chr3-43215879-1	2.43502619230564	0	1.4119400127322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25727033-1	3.55645200778644	0	1.41370869886652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14986775-1	0.893329793167648	0	1.95978102878432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13753904-2	1.86510185274785	0	1.53364170084105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57399018-1	1.87219948906545	0	1.48223786218563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111792287-1	1.43851176987538	0	1.52355141002121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55178788-1	2.61318106566846	0	1.44712387901517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32217532-1	4.51883910641939	-0.886622754861198	0.972688580104016	-0.911517594630735	0.36202271936374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05747649908318	1.89822571976554
Merged-chr9-118867143-1	4.1979829419182	-0.738997124366825	0.817502118087772	-0.903969675449185	0.366011481320656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50729200753228	1.90651118961886
Merged-chr2-90549712-1	4.28825001992691	-1.83541478515818	1.32055217296038	-1.38988433985429	0.164564001723617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr10-81198437-1	1.82188317502941	0	1.42499081798567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126588512-1	3.75181620623882	-1.93046432918835	1.33193991762565	-1.44936292068613	0.147236257948254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.06445977735281	1.55926189265627
Merged-chr11-59216945-2	3.60618022803259	0	1.40376521064859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103088731-1	2.32225514278879	0	1.4006401614476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36229514-1	1.5933721018114	0	1.50227408819873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37081281-1	2.86983891223418	-0.846319456750847	0.875832670943089	-0.966302679528427	0.333892745651305	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21392713144676	2.12189542097587
Merged-chr4-129794891-1	6.76147706121573	0.227248549023478	0.779659059566226	0.291471696807975	0.770690587289734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55677850945328	3.62843798748063
Merged-chr3-127933242-1	2.86577861161913	-1.81713528567369	1.55275969495548	-1.17026175497541	0.241895647679678	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr13-49364883-1	1.71169939001022	0	1.46764076301153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57659937-1	2.17381617091783	0	1.43127882849091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155821226-1	5.60022231897034	-0.121207881114412	0.624427730299985	-0.194110343331777	0.846089482856222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67397425015486	3.39606116526559
Merged-chr19-16048204-1	3.89764695958763	0	1.405384100767	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32550050-1	2.46109015140728	0	1.43194534976741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145744648-1	1.75838275988994	0	1.45691618594691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158232478-1	1.15060805619233	0	1.58819451103195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173753596-4	7.07693811191985	0.7854373273449	0.845266214605876	0.929218882492692	0.352775663637388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	2.09065778562608
Merged-chr10-127580018-3	5.63266173272197	0	1.3780608849434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100612317-3	3.80015622193588	0	1.39770123755594	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23782131-3	8.28121584279955	-1.03457317051666	0.755396639323729	-1.36957608315926	0.170819269696579	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95895410867937	1.46573328458049
Merged-chr18-11700969-2	1.99853317547614	0	1.50032369224471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-43515265-2	3.18486590028625	0	1.3958907307401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4346336-2	2.69532244287583	0	1.44249492125902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85610730-2	2.75857428554035	0	1.40509546001366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91724452-2	3.30771606403646	0	1.39935174904824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96562573-3	6.28946301467941	2.80146704455715	1.03751307791139	2.70017516328254	0.00693029773895522	0.155222107454416	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.9569411460913
Merged-chr3-115762847-1	2.19763797957638	0	1.43973971236838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29041719-3	12.4797316710692	0.64163984811314	0.398365957850067	1.61067941541992	0.107249614537992	0.952455774656215	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50764729878738	5.09566873175013
Merged-chr4-6221690-2	8.24952236805797	1.23002271839296	0.671775805151971	1.83100181483121	0.0671002721986421	0.714076682937742	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9451013333373	4.12655219828186
Merged-chr11-121753149-2	2.60811432279845	0	1.45040797882195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165907360-2	4.23341005506	-1.20580013823415	1.1705222743439	-1.03013856691452	0.302944963094449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.55634759613363
Merged-chr14-73403572-2	3.47410085510005	0	1.41098661433847	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30769384-1	2.35523699153016	0	1.49851975233441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77017404-1	6.03775453497224	-0.503100551802879	0.803458786318491	-0.626168461120606	0.531204451561696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72349343048033	2.41012803361152
Merged-chr12-111587525-2	3.84174204416775	0	1.37005246905628	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51502390-2	4.39465896278872	0	1.37921810053803	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74990392-2	3.75233603297041	0	1.43362680240392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30975727-1	4.01922770338827	-1.27681690067111	0.879488425889316	-1.45177226110739	0.146564939204964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36515869754542	1.25298535761957
Merged-chr1-180421357-2	2.44227122653099	0	1.50646998026322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125137510-2	3.06320849446064	0	1.43740833657921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136165456-1	2.17965475336386	0	1.50042751116352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74685345-2	5.05247184555209	1.32957108802628	0.957821761711662	1.38811952408587	0.165100652289753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	2.1893145161846
Merged-chr11-100408258-2	3.43583193606042	0	1.4052563572533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18987975-2	2.6291589310201	0	1.59843965322083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39253972-1	2.04530521256269	0	1.41677641115933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80345151-2	2.59936218561091	0	1.47453151380438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-93812670-2	5.77054715115931	-0.880957969409332	0.748170657012227	-1.17748265205613	0.239002917693824	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07454628738135	1.97731223551783
Merged-chr2-158284755-2	3.34974735354377	0	1.37490560785464	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141507081-2	7.75871218904221	-0.162943719402048	0.648042819928919	-0.251439741929276	0.801474144770625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19371587707237	3.27492400699949
Merged-chr3-104434600-1	5.30321643512758	-0.0961654686451958	0.831649111275012	-0.115632262863557	0.907943992340849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10380936944073	2.42487575335598
Merged-chr9-23581181-1	3.30340495064547	0	1.38492138481216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148074736-2	3.89023157409227	0	1.39191173176785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108983286-3	3.87672580330805	0	1.38946733975435	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84363938-2	5.68930638608177	-0.761035039614981	0.723520866921753	-1.05184946890728	0.29286861859455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74150245469487	1.56277881816808
Merged-chr7-45562293-2	4.25259555842924	0	1.37725028422877	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41558646-3	6.58327484991166	0.896593872644539	0.738416040702018	1.21421234537665	0.22466664743841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31260716574699	2.8308083484115
Merged-chr5-24387953-2	4.97332489693706	0	1.36015578135364	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117790439-2	3.84309460104117	0	1.40889589289684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87152757-2	2.69252025430571	0	1.41480052880571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79866069-1	8.00617441143964	0	1.35946324127688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-40869253-1	2.36486628940597	1.27077872797926	1.34049066025228	0.947995212245713	0.343131891572463	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	1.28067447403188
Merged-chr16-95825849-1	1.58922502914403	0	1.50461909182438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34849011-2	6.01167447332827	-1.3534835532559	0.764065303730158	-1.77142391710264	0.0764902342885241	0.772706308435213	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44421987247085	1.610618888618
Merged-chr10-117837614-1	2.61359742950878	0	1.44741864481626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-44173351-2	3.28350081331961	0	1.37676603939428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-6467167-1	2.37721454206783	0	1.4646217662965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-3944087-1	2.02433307572865	0	1.44354986036774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120404761-1	1.78051646729988	0	1.47548500243775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36552488-1	1.69112850274958	0	1.48517764654332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133601057-1	1.99876458474976	0	1.47137678790636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134118931-1	3.98270504013033	1.40260931921374	0.976997297463341	1.43563275236835	0.151106869860617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58321107267933	3.09165470737291
Merged-chr5-89731975-1	1.74090187357067	-4.60334060200445	1.60510260455138	-2.86794164370013	0.00413151730055603	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9369578304866	0
Merged-chr3-105078100-1	1.7951667890587	0	1.52684888019972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72942732-1	3.60456649274344	0	1.64110501773993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-89936870-1	2.89065639755144	-1.50687409310407	1.24187675495241	-1.21338457064672	0.22498282259866	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93054380367147	1.08593863411001
Merged-chr11-63402930-1	2.40915829675548	1.85136651175065	1.37459203902509	1.34684798048424	0.178029198155731	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr3-33824740-1	2.84765288787485	0	1.38783747508299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8691193-1	2.18784519935601	0	1.50639133345978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135681480-2	2.58833018370787	0	1.41655423337413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50995974-1	2.39407973825142	0	1.40987310695002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61097915-1	1.41706528385608	0	1.52730589701026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142708227-1	1.84367520027863	0	1.55660965816467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68143085-1	1.61394721546692	0	1.54145257355305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117537192-1	1.14413883844231	0	1.7362489052332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32692580-1	2.18000958872154	0	1.45276115601257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141385400-2	2.89095010012592	0	1.42662449726007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41044768-1	2.50778957952106	-0.040459646143385	1.28252722187321	-0.0315468127719668	0.974833459511967	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.723581231604105
Merged-chr2-36009541-2	2.72928298969792	0	1.42353346875343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12174481-1	5.12340547611232	0.442651499205092	0.830103084319625	0.533248830858039	0.593861343346666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39189787604781	3.26630364612125
Merged-chr5-135712442-2	2.73388820923624	0	1.4708833616747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26451684-2	8.1137585124568	1.08744451031077	0.784658725577215	1.38588213558808	0.165782896589562	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13173672580165	4.26117019038459
Merged-chr5-16832036-1	1.36254866055972	0	1.62752854515386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72814148-2	4.45810559094093	0.479023987645752	0.841180427253027	0.569466397607539	0.569039668209631	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81683205337095	2.21213269525289
Merged-chr5-150220484-1	1.60501266752511	1.27978172536953	1.52306395451198	0.840267883418988	0.400758204503384	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr2-164377645-1	5.35123837327284	-0.035943962086213	0.660382545279014	-0.0544290008013864	0.95659337379641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	2.41307516068939
Merged-chr19-21479576-1	6.20121628231753	0.689655524705608	0.653327959772347	1.05560387304704	0.291149230700846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89017604405251	3.77950772899768
Merged-chr7-74692583-1	4.57977194924322	-2.61036061654722	1.15106830080804	-2.26777213369074	0.0233430986905031	0.358144934156663	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	0.303163067301871
Merged-chr11-15726057-1	3.47732618874517	-1.25505555694663	1.04994798335701	-1.1953502238595	0.231950224723399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80581250207881	2.28754604118166
Merged-chr2-90559834-1	4.99510271047378	-0.359360107116847	0.785816830790677	-0.457307724950691	0.647449878036006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96191553276564	2.29878697443428
Merged-chrX-38642356-1	1.53984710667861	0	1.43118000726552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45093966-1	1.35137173740048	0	1.59007996183352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52537772-1	1.1430986348791	0	1.5240630377684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20088542-1	3.10593497254259	2.92100216782889	1.44107187553423	2.02696494007006	0.0426659983209865	0.529033075440353	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.08990416182602
Merged-chr10-53471441-1	2.43107592341356	0	1.51583391637335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98349284-1	2.39646643072232	0	1.40444810360235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29380633-1	1.08929995637436	0	1.6755352155472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70580840-1	1.39050889603813	0	1.50191755838649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162414040-1	2.65623580207818	1.36160607295454	1.19997983413351	1.1346907958147	0.256504895139415	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.30064958020929
Merged-chr11-107467357-1	5.21180338355474	-0.810182831523396	0.820313362510987	-0.987650413304763	0.323323887312571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37528155229931	1.8538004573626
Merged-chr15-41163034-1	2.68621947943943	0	1.43554615316847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-106369300-1	3.84177998201139	-1.02263373317696	1.08752770416418	-0.940328903127023	0.347048878335848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70689461397317	2.57652457044436
Merged-chr11-100169265-1	4.15680649425762	-0.314881259973588	0.926216094634141	-0.339965221720712	0.733882718711939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74582788910746	2.24979923409176
Merged-chr19-11601012-1	6.15694988387604	0.378132808646113	0.722211344039074	0.523576390439049	0.600573206239764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47744888713631	3.1484028955544
Merged-chr13-34200557-1	2.24073092923424	-0.0354730847159844	1.42944851328739	-0.0248159233342408	0.980201789985842	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr13-9611417-1	1.5330397989578	0	1.53540006221322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167463149-1	2.87741957819371	0	1.41127128292706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-29290792-1	1.36617872278096	0	1.63097314352901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25364739-2	2.29068336667126	0	1.43119379672338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75158736-1	1.58147992190635	0	1.59633970983412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4227086-1	1.96316954476146	0	1.60500420138502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26605316-2	6.43946774555171	-1.50070453135759	0.995908261760501	-1.5068702499814	0.131843918403351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94995032246061	2.22504795975822
Merged-chr8-104028853-3	3.71941826194106	0	1.38168158771976	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52600708-3	4.16604394167994	0	1.39573637492455	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29406134-2	2.7454128335912	0	1.38475872632522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74313505-2	3.21022368502868	0	1.42035149481246	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54731589-3	3.6209797865298	0	1.39527522989215	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92403180-3	3.55289284346844	0	1.39353127231408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-141228380-2	3.23545471187614	0	1.39279400876726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126848996-1	4.21325018056607	-0.0357267066243946	1.38398420420605	-0.0258143890051764	0.979405384907409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr3-81099443-1	3.01664743572772	0	1.37263867203508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81548851-5	15.2271469947559	1.1908140634716	0.434048210328766	2.74350644728988	0.00607868545189272	0.141710872168079	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97025883310709	5.00038924724858
Merged-chr6-134078535-3	6.60144203441569	-0.22329679226274	0.889519565105607	-0.251030782258543	0.801790310206861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	1.6776376524744
Merged-chr3-103841108-2	6.73583431290066	1.81738200179447	0.681576058398524	2.66644049391158	0.00766591761309746	0.167488591451111	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69486619385668	3.99408255127376
Merged-chr15-89339876-2	2.30374658370837	0	1.41218521183793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110816273-2	3.23170909670451	0	1.37152357693835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34156417-2	5.1886299485465	-0.116911718257777	0.953460400308827	-0.122618326067772	0.90240934185272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75898897381162	3.51470673391349
Merged-chr15-3202458-3	3.42847111695982	0	1.39508706033562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19527493-1	2.13244516664197	0	1.50039322786238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37757158-1	2.35644001135467	0	1.42322733048924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116619744-1	4.08332876820006	1.45103304318089	0.890835588324433	1.62884494310575	0.103345847762362	0.930403600283911	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68333779073552	3.97916362135423
Merged-chr14-46916749-1	3.170712838424	3.75394164646141	1.22168968205223	3.07274564204833	0.00212099189446748	0.0652859560539963	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.63652767719699
Merged-chr15-37906279-2	2.92933330202772	0	1.43473764083859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80129678-1	3.01981619149227	0	1.3995741712602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77879257-2	1.79661376133921	0	1.63880500524238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121291891-2	5.61018470673203	-0.331115407912356	0.789769055478023	-0.419255990869309	0.675029056102473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03459680081336	2.18410453830223
Merged-chr6-120539294-3	4.64782700349841	0	1.36131809580003	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59220189-1	1.73126654916401	0	1.48724294998766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179760809-2	2.17544005554933	0	1.44334369675567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155218276-1	3.63781388422007	0	1.38415768919434	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14810351-2	2.20093141390611	0	2.30553384223215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65126314-1	2.12186706054064	0	1.41670805656213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24118387-1	1.55546594545243	0	2.38385278894064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58274013-4	10.3972824801522	0	1.35538539795731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170153016-1	3.04461793114772	0	1.41810233009252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126873374-1	4.50519998884233	0	1.36202160374945	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84532494-1	2.41944048700509	0	1.40328638299513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22418492-1	3.09850558592164	0	1.4020403571737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83771613-3	2.93215035712192	0	1.40714382194706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-25849406-1	6.63898737929946	0.0789894458045365	0.643784137298339	0.122695545336078	0.902348191520162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45499105887688	3.49393697074132
Merged-chr16-45192763-2	6.57327611644247	0.0763039768874495	0.576871591926492	0.132272030648326	0.894769129278484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21068215388718	3.24795187866118
Merged-chr12-105721729-1	6.09349360434513	-0.138083560725461	0.654751202444751	-0.210894703529946	0.832969437154521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1331985207636	3.03583183213984
Merged-chr2-92486556-2	3.95338343293915	0	1.37192374387727	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155179207-2	3.85237826884103	0	1.38988671390229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86449817-4	6.15386652384522	-0.0653629764939684	1.11373202686816	-0.0586882435964158	0.953200423449025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.577068348605183
Merged-chrX-164454396-1	1.69908411314893	0	1.53170611480685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107820139-1	1.99854637007024	0	1.55807035417261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60670661-1	1.53303740208964	0	1.55987743398902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16694511-1	1.98798443773113	0.936408514810668	1.51309741638531	0.618868623176746	0.536002910290827	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.577068348605183
Merged-chr11-86653614-2	3.29683335246186	0	1.39798153513764	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106439479-2	2.71652221696497	0	1.40087852382349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101641825-1	1.20230966207442	0	1.74860079680069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21856093-1	4.62240775324861	0.534039057609029	1.13091836189367	0.472217160498486	0.636771792157792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56821354400587	3.12779754465118
Merged-chr2-145882809-1	4.63087242493327	0.247004288353292	0.918259636827139	0.268991773619458	0.787936013142238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27306840521062	2.56442052513643
Merged-chr12-33311883-1	2.39095462560962	0	1.48022550920422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69257267-1	2.17594451438652	0	1.45242801255742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132338183-2	2.76973480917675	0	1.41664770103955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109671730-1	2.55791932185821	0	1.40598533613406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57855882-1	2.95720466184533	-3.78618714714099	1.2883135702657	-2.93887081105584	0.00329410348802812	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51338990754334	0.303163067301871
Merged-chr6-37396295-1	3.13933102632675	0	1.49331543153367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88310951-2	7.18073373509876	-1.78954180141765	0.961554576931973	-1.86109228155049	0.0627311460145466	0.685882931819451	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95933272142179	1.14143228603163
Merged-chr8-35737607-1	1.91501292959403	-1.34482252924019	2.18233083051936	-0.616232200193104	0.537741279227142	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24003128049356	1.49169296430729
Merged-chr12-91774882-1	1.8472427613747	0	1.49953696031877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-84079083-1	0.863655866732799	0	1.78585127055111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116906941-1	1.75567095851325	0	1.63275348916612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19063011-1	8.35500337260647	0.114129038356849	0.652306079845103	0.174962401674917	0.861109176942467	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41396759389214	2.54120332682558
Merged-chr8-85499340-1	2.13594014277511	0	1.41219208254114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-106026990-1	1.30159116477072	0	1.57593011738284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31366652-1	2.65850865308969	0	1.42052768369891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124037509-1	2.16754624384503	0	1.43740372162254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114698759-1	7.42680423827567	0.453850110975284	0.597068369489803	0.760130889805971	0.447176350064335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4429599984065	4.27344312349232
Merged-chr1-33234355-1	3.36312828791538	1.53383549513442	1.21491496163265	1.26250440859926	0.206767340939112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63879159991986	3.04313041560469
Merged-chrX-152159523-2	2.52238973014053	0	1.49846029996293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71865634-1	5.40537340217781	-0.829527688611064	0.690993199079794	-1.20048603910394	0.229950631455841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0849014692737	2.46652732427062
Merged-chr11-35297998-1	3.88117292266829	0	1.40033553924295	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75216627-1	1.766469687317	-1.05942572296968	1.47930646650376	-0.716163788206481	0.473890219990293	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0.904676873936758
Merged-chr10-122683294-2	2.72359941677319	0	1.44418982327171	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16801166-1	1.69090410111325	0	1.57029226266854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21662619-2	2.84346983548855	0	1.40896470802601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-42835019-1	1.44983315952858	0	1.53172494458862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130862225-1	3.07098671936158	-0.747853427742782	1.01095426147426	-0.739750012678316	0.459451695308145	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.575641413063	1.20027794713453
Merged-chr12-99333649-2	2.86076085767131	0	1.41306371523862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87256865-1	2.87903025698375	0	1.41090711232228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-54614345-1	1.89313649332719	0	1.43734219539692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30041674-1	1.18492300061164	0	1.92347411461623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34587380-1	1.48797096078472	0.606422850499013	1.54237114140674	0.393175698260224	0.694189717347932	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr15-31468070-1	3.14232448731732	0	1.39819026733366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135309931-1	1.90073075842803	0	1.68520362997339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61238169-1	1.05286379480844	0	1.69813736164149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90313568-1	2.22070919276529	0	1.4932279262448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80654081-1	1.57613673314565	0	2.26339120964164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161998315-1	3.02947869024251	-0.227007941376149	1.16692943128209	-0.194534421097546	0.845757446358996	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	1.40298672487694
Merged-chr11-64493727-1	4.23624432803169	0.931635037279808	1.06873528392141	0.87171730109017	0.383362619474462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.55809314683451
Merged-chrX-99001439-1	1.29665136777996	0	1.64915759614941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82785936-1	6.08808492237899	-1.41994651711242	0.792951925421334	-1.79070946370164	0.0733399302575233	0.753985480232883	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98808453458533	1.55424902326769
Merged-chr1-131181828-3	8.31372250293246	-0.343289115575065	0.684559145019683	-0.501474734612149	0.616037054731106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09962039219792	2.06695797389053
Merged-chr4-6341116-3	10.6714942317945	-0.462563543939827	0.477938873344521	-0.96782992499208	0.333129315934986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.53480605342355	3.92627731109185
Merged-chr6-53684539-1	4.40093107395285	-2.13091570210114	1.29189742800819	-1.64944650860288	0.0990561932822778	0.906039981597062	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17564474993106	0.303163067301871
Merged-chr16-32458183-4	6.32997804316829	0.542857487099574	0.804767604309396	0.674551863410832	0.499960524577934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34389275758327	1.8972775875948
Merged-chr16-90197019-2	3.0565927583282	0	1.39597654285178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41028697-5	7.21907582125174	-1.34736786133881	0.979983473524536	-1.37488835040551	0.169166061472842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	0.903978167044898
Merged-chr4-41469310-3	4.12162895898813	0	1.41670534550423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155071275-1	3.90169858894969	-2.35506668469903	1.27222624549086	-1.85113826494783	0.0641496644002537	0.695059120417259	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chr17-26583791-3	8.79495215169208	0.940035587983699	0.570716016405618	1.64711618556645	0.0995341668892553	0.908577292683967	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63063970350352	3.92719799034776
Merged-chr2-132230004-3	6.08851443423275	0	1.35828657588848	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57182174-2	3.30756738522377	0	1.43564476960609	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107268207-2	7.16550982472551	0.424487863158569	0.726059589455962	0.584646039144857	0.558785744210868	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.543490698388	3.12648082629072
Merged-chr2-128948366-2	2.66291604853634	0	1.45128507567918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75436855-4	5.28461266301531	0	1.36271822638212	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120381187-3	4.87836138887809	0	1.36897828952992	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45447768-2	4.50911117447823	0	1.39752714450509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122244025-4	10.646308563623	-0.00598586391473362	0.562740251606489	-0.0106369926402908	0.99151306784243	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16509856899259	2.97147826174487
Merged-chr1-177487986-1	1.93983100255195	0	1.45208657109844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120088741-3	3.82528838473894	0	1.37274243213154	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28038338-1	2.59653321259818	0	1.41447843141458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183442293-1	1.86211341436213	0	1.43638981172396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81199298-1	2.92451519771877	0	1.42022906982502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38388464-2	2.51498177020385	0	1.44254947413175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-49431435-1	2.91419044961745	3.23768942879271	1.26779443289902	2.55379684969052	0.0106555405947458	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.43852373395375
Merged-chr2-129407885-2	5.4160504678836	0.493563110379283	0.780428079523228	0.632426130388346	0.527108463746173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18877323851778	4.31586155471747
Merged-chr5-66125180-2	11.9060356501556	0.4054744436104	0.557396337353949	0.727443681340378	0.466954203865646	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18826825060894	4.65136925263952
Merged-chr1-137899554-2	3.112629158081	0	1.40275074855932	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85359807-2	6.15886813721074	1.43417226997607	1.2171183971503	1.17833423053498	0.238663386381892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02186287315087
Merged-chr7-126144018-2	2.47897666833871	0	1.57644818674669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123545813-1	2.4437467195231	0	1.42164190853016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17273637-2	3.37191137258421	0.816969989496644	0.98677187930109	0.827921839519066	0.407714765730024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22017310661124	2.69622693919624
Merged-chr2-105428139-1	3.77445549940724	0.810034974465254	1.04212513947154	0.77729146316921	0.436986830507346	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.68020903733389
Merged-chr10-19558461-2	6.64319884242495	-1.00721335911361	0.842932853301166	-1.19489156837235	0.232129397581669	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55970492020469	2.82094311926744
Merged-chr10-52385445-3	3.63928430385332	0	1.37190989732495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134156267-4	7.70771493956316	-0.107344616622049	0.871657495413453	-0.123149995482035	0.901988321880841	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	1.74224738577465
Merged-chr7-101863635-1	2.83255497282953	0	1.37451623416333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75291085-3	3.3944414140884	0	1.41713675541539	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86591612-3	2.98371382428265	0	1.40177721469298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96483433-3	9.16710635468047	0.361238840958488	0.569080337920604	0.634776527824594	0.525574173915246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71626589531435	4.12234525014975
Merged-chr3-90460508-2	3.83509580563936	-0.68708328773504	1.35323851392847	-0.507732584214166	0.611640893922109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.41385117919798
Merged-chr5-99284524-2	3.72838704114086	0	1.42535691694723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124614683-1	2.61019843178058	0	1.40812512165874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127626666-3	4.52821139055983	0	1.38800665759166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13027686-3	8.48127099307777	-0.554287344015239	0.624531600926097	-0.887524895767171	0.37479636870786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.00063803781024	3.55205187168008
Merged-chr14-64842741-3	3.84425553772317	0	1.40359205171679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106556046-2	3.33259781226407	0	1.39465006575486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-167415038-2	3.72808908542616	0	1.3827881473675	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-133186488-2	2.91197826980536	0	1.39091146342179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27493237-3	3.66992312931954	0	1.39057719590255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10767320-3	3.38288680473762	0	1.38714795364754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13542677-3	7.02585816634282	2.30892933440175	0.909518135691341	2.53862924090754	0.0111287690207859	0.21589891334793	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.01614957321096
Merged-chr17-75536813-1	1.59159169373669	0	1.55101299812094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136700146-1	1.48541028305924	0	1.60451120250118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47471934-2	2.4844794854691	0	1.42440275757967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65193366-1	2.4857808503872	0	1.39595089184493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25048976-1	1.57336111012759	0	1.59220340225366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80167921-2	4.50229047661161	0	1.44778269663858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73231701-1	1.94519911429077	0	1.53771158887967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47653535-1	3.5498079435251	-2.35980197434854	1.08208226441291	-2.18079720179949	0.0291984196400746	0.416813280580524	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58111491336869	0.723581231604105
Merged-chr2-51072694-1	1.9364361778253	0	1.48052552653784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40470382-1	1.42812221072773	0	1.74567137531988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19477248-1	4.79278719126621	0.475000600317985	0.787817986242408	0.60293190637035	0.546553989270765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17540470129796	2.50157711100616
Merged-chr10-78279338-1	2.15412025927939	0	1.45285773233905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79495648-1	2.21959238509999	0	1.47160450583857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31171028-1	3.79759129282107	0.14886507325847	1.14602778475805	0.129896565544349	0.896648261566261	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41685582892305	3.03991357745065
Merged-chr9-103996719-2	2.53395103363055	0	1.4325061715565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15366145-1	3.00596635953155	0.334203676812691	1.26809261488379	0.263548318861015	0.792127986354042	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	1.51226750748471
Merged-chrX-57271048-1	2.44531464922729	0	1.44485596063376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116180897-1	2.0651234512404	0	1.59144795113455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102057575-1	3.40127374660271	-3.54356011116162	1.27953463050032	-2.76941321218951	0.00561573633042978	0.134715715439467	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52572753666912	0
Merged-chr2-126073415-1	2.45746370192298	0	1.41446166108656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35117521-1	4.42062263493338	1.04814892512768	0.846607243099462	1.23805806490666	0.215694531583201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	2.86182739410792
Merged-chr5-110434914-1	2.40353989131681	0	1.4048428411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47396522-1	3.88262689831299	1.41024704869155	1.12138376871974	1.25759538173234	0.208538124425622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	2.69383587858317
Merged-chr11-54486269-1	1.84068826623928	0	1.45164974554421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130795574-1	4.41891406367298	0	1.42617716585559	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102784863-1	2.44818769144231	0	1.4147430787977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110659902-1	2.68317407942221	-0.720177482219925	1.39227095077609	-0.51726819540297	0.604968952632211	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.465515277017237
Merged-chr13-28513225-1	1.20999087617182	0	1.64839525413508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35717826-1	3.89216812690882	2.28290944124773	1.16519958377584	1.9592432687368	0.0500843040925599	0.590443002855663	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.19225357173982
Merged-chr13-118052993-1	1.98090065511734	1.43712889968353	2.36319967540156	0.608128426320695	0.543102300172935	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	2.13181911573474
Merged-chr8-117502373-1	1.66547095389158	0	1.5346640634405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55020699-1	1.78114718742489	0	1.44481390058967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-119764009-2	3.35788244283915	0	1.4425282289151	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163788683-1	2.32060124725179	0	1.45462934536118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54528640-1	3.44719442066485	0.125447379217021	0.974262061836875	0.128761433017829	0.897546423416419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	1.59173462754619
Merged-chr2-130961954-1	5.4217565450184	-0.813847305170855	0.765653898782622	-1.06294411412893	0.287807295931077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6865887084064	2.54210483490443
Merged-chr19-3357841-1	1.81307766434655	0	1.44201627120048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36826352-1	3.45281689594349	0.748282672404192	0.951088506729846	0.786764498897199	0.431419739081694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	2.00101204725338
Merged-chr15-100102337-2	2.45386099929951	0	1.5652296830917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34954211-1	2.87104800098679	-1.61576533599626	1.08298631785687	-1.49195360029452	0.13571130962497	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39918060752532	1.03838943879457
Merged-chr17-28283415-1	2.92882378224066	0	1.38033374200305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40431721-1	2.54274343189868	0	1.46041536910757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65497239-1	5.2622311508459	-2.65542738968165	1.06359706996466	-2.49664789859743	0.0125373374853256	0.236055568356513	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79312270807505	0.55634759613363
Merged-chr7-125588921-1	2.55450665114758	0	1.45782998329222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69198339-1	4.04104001395847	-1.42959488900357	1.04861018026328	-1.3633234884718	0.172780582563307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69736543272236	1.06702908365212
Merged-chr5-140963060-1	1.66774906770866	0	1.50099927399045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191086286-1	10.9167017943103	-0.451083037925191	0.572938912944381	-0.787314367612138	0.431097861060556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50131090737978	3.33741648334363
Merged-chr1-14579026-1	2.17067481474787	1.8394008048491	1.49663816361688	1.22902171651421	0.219063663921997	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr17-29440088-1	1.56139174489055	0	1.49996805433788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24525275-3	7.04998360612024	-0.0570025566823866	0.713036727797691	-0.0799433668142826	0.936282298452077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49051861592046	3.29786104694155
Merged-chr17-48331051-1	1.91715088035169	0	1.45442400641549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19305565-1	2.57566106662574	0	1.43095072764279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25030277-1	1.5876531428286	0	1.51855384665653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108539105-1	3.02364562489276	2.05453158233907	1.22266055457003	1.68037774234206	0.0928838437800482	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31016258956889	3.66568981434781
Merged-chr16-30596103-1	3.25962426438387	0	1.46180686178005	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125139287-1	3.2476568579556	-1.82978914022503	1.16352442674163	-1.57262632237917	0.11580536900938	0.994115794192827	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44452714682857	0.882176137820124
Merged-chr5-142932049-1	2.61074070547631	0	1.40394795984817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84341604-1	1.01648539778264	0	1.71870286821115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100112082-1	1.9211212356068	-1.91543578521728	1.6080206094744	-1.1911761416064	0.233584443631189	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr6-43542049-1	1.94868659992858	0	1.42424810803919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68953037-3	10.0308894610517	1.09863722150998	0.697322491687383	1.57550808213785	0.115139214397276	0.99110887655131	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.71342899381493
Merged-chr17-43012932-4	9.82832327978376	-0.461617129305206	0.582864312833322	-0.791980430335957	0.428372087087115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.16109431507429	3.11226973234715
Merged-chr12-52504644-3	12.3582337596357	1.6655197465571	0.941262174197106	1.76945360412234	0.0768182068570815	0.775299091448959	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.67656321522231
Merged-chr4-9665883-5	9.54414395762204	0.0701994682899294	0.644216064179662	0.108968826133388	0.913227216203783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68099393481061	2.74339089857427
Merged-chr2-84246704-2	6.27259063572209	1.85082530502557	0.793617909821175	2.3321365132027	0.0196935107325989	0.316721760329392	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54311005189624	3.78264294223142
Merged-chr5-64866840-2	2.62186548620823	0	1.41614769364964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8808004-3	4.56979262651147	-1.0548468389683	0.977679068035137	-1.0789295520955	0.280619133674783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26328071717007	0.730937814817307
Merged-chr2-129388703-3	9.27332830319218	-1.18419352928895	0.576249658897904	-2.05500083341266	0.0398789242148153	0.506608656553668	C57BL6J_F1_Control-BALBCJ_F1_Control	4.63331971149821	2.91651877951846
Merged-chr3-148987011-1	3.58734229663036	2.1022923871695	1.22405431626012	1.71748292477141	0.0858909716828555	0.827200126776981	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr1-31154136-1	2.55554573787898	0	1.4296301265901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120247427-2	3.1621901781265	0	1.46347669127064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103338405-2	4.81144819222446	0	1.40163402193015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189080994-1	1.725379594685	0	1.4347926982107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67831410-2	2.97017124764421	0	1.39971293850565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-85218306-2	2.77498565705378	0	1.44649443711299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65105207-1	2.69441477565106	0	1.4410009313147	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58456520-2	2.58798702754184	0	1.48523741150126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141407079-1	3.49941738439986	0	1.39695725511954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61967419-1	3.20523343054199	3.14292733151052	1.28991413579717	2.43653995586937	0.0148285311395142	0.264978344580162	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.81828307388421
Merged-chr17-56939363-1	2.38776289523866	0	1.43008544540776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123356373-1	2.42775695094248	0	1.42674065342352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125420400-2	7.08711628264726	-0.263131809235039	0.622259457527464	-0.42286510241337	0.672393685439267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20480436346022	2.53692024245732
Merged-chr6-53795990-1	2.76975497839356	0	1.40801007925981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-50959546-1	7.91221821184474	1.09902683631145	0.899333750061943	1.22204558233887	0.22169038997114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20163360274201	4.84533551931055
Merged-chr8-108608967-1	1.47001530553321	-0.0332857020415997	1.35111845150453	-0.0246356653663746	0.980345571077095	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	1.06633037676026
Merged-chr11-18871379-1	4.69205913319697	-0.29255636060805	0.798382328431766	-0.366436417978724	0.714039449011735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51647496866182	2.82164253984568
Merged-chrX-18284754-1	2.04131517041989	0	1.48321722321652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181022419-1	2.17448893614987	0	1.41938227132184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22163908-2	2.51222048996102	0	1.41286449345103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61682548-1	1.70308981680187	0	1.45522081753363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90955379-2	2.57231313590977	0	1.40904495351283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84750622-1	1.7190734867749	0	1.47714251483383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49210722-1	1.81174988737987	0	1.44822071429612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27927046-1	2.41188786284385	0	1.42469794888413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58615401-3	4.11579820132687	0.624354105914897	1.36739692907684	0.456600488591422	0.647958227954311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr3-89474033-2	2.29201115215416	0	1.41744298562372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47319024-1	2.05873348764061	0	1.53150192838427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144300251-4	4.10078997446488	0	1.38162513364618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34216159-3	9.60074217035349	0.906005694214235	0.629395299851671	1.43948595489632	0.150012886507303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48834673140933	3.62615712994093
Merged-chr3-31139220-2	2.78952613630944	0	1.42956245839793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115887045-2	3.32296223140577	0	1.37617716927278	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55888010-2	3.25081121908186	0	1.40699177615534	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56614516-2	5.70768443444708	-0.039320412028448	0.696427733240712	-0.0564601467627903	0.954975243131565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78588933098808	2.75267053343312
Merged-chr11-79286591-3	4.89479661668442	0	1.36070716099312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35349409-3	3.66248042656804	0	1.37742659864331	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43606935-3	9.27073364294748	-0.696449639827079	0.538684094493996	-1.29287210620406	0.196055296342577	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42360387675566	3.07389803427425
Merged-chr13-10540383-2	2.62811371046887	0	1.40475955233889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131869501-2	4.6701925543459	0.472785647826811	1.24952840093261	0.378371269891857	0.705154807831691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.67591700901439
Merged-chr18-61134702-2	4.17042717032708	0	1.42726723919557	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58850020-2	4.02010630775714	-0.879094071116117	1.31281833091646	-0.669623549895466	0.503097797709412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.67591700901439
Merged-chr4-3085608-1	2.09509359208473	0	1.51615131788761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136211933-2	2.12948357309836	0	1.41752720598279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81510878-1	1.51819990657979	0	1.506485349908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25436351-1	2.56684655849485	2.72568521159901	1.28380499702429	2.12313024011966	0.0337429396108031	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.56608458088645
Merged-chr1-167551861-1	1.72570167741592	0	1.4285675809386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116170255-1	7.64647239434661	0.166397606315524	0.522774476049368	0.31829711269188	0.750259574256983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66942684218967	3.78847193679164
Merged-chr8-108770758-1	3.18862579382099	0.70629137569378	1.181629338742	0.597726674970441	0.550022323588416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.14143228603163
Merged-chr3-60569601-1	1.73682447948149	0	1.63086310613348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34778036-1	1.91029789247149	0	1.48668042369393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23727701-2	3.56972953534504	0	1.40941847794935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23821703-1	1.74977481886397	0	1.53738395276786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40313198-1	4.26899457792802	2.72516823252992	1.31621257644727	2.0704620828694	0.0384090932696769	0.495110244497597	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr7-75691527-1	2.00096460992999	0	1.47235364855802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53785604-1	2.29558691814328	0	1.48756333765622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134298494-1	2.79416194662732	-0.613353240102977	1.00754837273916	-0.60875810700333	0.542684785423978	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6861536412647	1.56533893459231
Merged-chr10-123101523-1	2.87312185537123	-2.22358003618938	1.33625503053339	-1.66403866431231	0.0961047029729043	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29835464915396	0
Merged-chr2-51509412-1	0.81572262431316	0	1.84627726420795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-36186635-1	2.01505137825984	0	1.51031981605362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117232356-1	1.66317993465304	0	1.53847293568334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81668647-1	1.97130231308989	0	1.51917964966434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46507930-1	1.95093947939041	1.59598122590357	1.42501727963063	1.11997324433655	0.262725163869058	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.10056930386922
Merged-chr5-33803580-1	1.5404018244563	0	1.57176930433828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-58350814-1	3.82562724939095	1.76926627566921	1.24738099220287	1.41838482927713	0.156078442339925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	3.01818784633978
Merged-chr12-86889622-1	1.59033143757157	0	1.44973428220897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86024557-1	2.12141584034581	0	1.44331576461055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53128734-3	3.31067810451951	0	1.39105722043131	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-77077935-1	2.23117729479364	-0.572203393988879	1.53471980905995	-0.372838996806438	0.709268276871777	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89010511185031	1.610618888618
Merged-chr11-16589514-1	1.30495459413655	0	1.64102051102725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101174823-1	2.47775197434205	0	1.49305539654997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88559521-1	6.88849255024047	0.822059116636759	0.803746536268906	1.02278402399451	0.306409973304683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78278738970338	3.72101101233986
Merged-chr11-50207334-1	2.29331579685655	0	1.39605887529104	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55398364-1	1.85614189365187	-1.243246683924	1.48598025626281	-0.836650876540396	0.402788838939299	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr15-62450011-1	1.46184969378361	0	1.52559276239924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69575398-1	2.47823916955895	0	1.41135374127744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50605889-1	3.26931227685837	-1.72280263704878	1.28869681867409	-1.33685643673842	0.181269502997485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78671256729753	0.724326877898254
Merged-chr5-29293392-1	2.30527828344639	0	1.48159543382995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185294400-1	1.73967142462254	1.48878452776693	1.35360976007445	1.09986243574739	0.27139206377151	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.97908007631626
Merged-chr16-14381174-1	2.49168714024918	1.19490676917066	1.41655220114728	0.843531758450484	0.39893111180653	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr13-81104038-1	2.69898744509945	0	1.39878373382685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-56795335-1	1.19507721525741	0	1.62660965054264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142277637-1	1.71554060054648	-0.424162940348163	1.43724197929565	-0.295122843931982	0.767900039563953	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.904676873936758
Merged-chr4-84977045-2	3.38858270426874	0	1.41642993449169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26482932-1	1.66395635187526	0	1.60588015190558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145073064-1	2.48572200942273	0.421196252366399	1.83621694419044	0.229382619357158	0.818571543803606	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45063110846411	1.737158151675
Merged-chr13-75823943-1	4.5962355785541	0.034027695387155	0.77748801461508	0.0437661992821863	0.965090770319706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96006934525357	3.01086277553065
Merged-chr7-100817365-1	2.87256161350207	0	1.4199563623757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99198061-1	4.45441475571986	0.635821256018122	0.804745419433145	0.790089934859136	0.429475247555571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96353301543917	2.29329174547808
Merged-chr13-112336260-1	3.76296489034849	1.78073607253776	0.940153993365599	1.89408978221005	0.0582130937453401	0.65379426564109	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08153858449613	3.81531046652527
Merged-chr13-6469561-1	1.91349665890068	0	1.54608211718916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89974797-1	2.70095579322674	0	1.40803625569756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125062207-1	2.42701938651391	1.21064980230915	1.17198541099068	1.03299050564613	0.301608341820346	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41083941945204	2.09260528691242
Merged-chr14-103537550-1	1.20150150542746	0	1.61937413420131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53868621-2	2.81460063601986	0	1.50248829578528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-115017513-1	3.58538967735207	-1.23534412988679	1.11667572052696	-1.10626935571218	0.268609951403821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50954942419772	0.903978167044898
Merged-chr8-11089040-1	2.25739112770727	0	1.55740671392295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82822457-1	3.09076900444092	0	1.46991930141686	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150025912-2	7.39499299951595	-0.0774842769648385	0.638339355254744	-0.121384145168234	0.903386774341091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0314401642927	3.80307506198854
Merged-chr1-17608561-1	1.98718307662401	0	1.44481327228857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52958629-4	4.24333497955766	0	1.39612754591661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154334885-2	5.03805387868107	-0.0379809913955645	0.788465644317423	-0.0481707626315725	0.961580151167911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04585323093051	2.02208088071412
Merged-chr1-73902451-2	3.10752732800989	0	1.39551785756363	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118082947-2	8.26410637084932	-0.870978581041393	0.663180385292784	-1.31333585907682	0.189069800330982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18425239327839	2.43966724675336
Merged-chrX-99595663-3	3.60850130219991	0	1.41380696814014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100655935-1	5.56077646769037	1.47841507934045	0.837951294422866	1.76432101624558	0.0776779475839099	0.780354010850815	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2281768200003	4.2027825474182
Merged-chr4-3771933-3	5.9730524822096	-1.42126081798305	0.844243485526838	-1.68347265018708	0.0922836295727978	0.863861859815347	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60427070114951	1.58383754133375
Merged-chr9-45260928-1	2.32001018358298	0	1.4191344676803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66795903-2	1.83797167754265	0	1.54833931276342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33797521-2	6.39245282730923	0.0722678871074316	0.75814149324515	0.0953224269497453	0.924058729631257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87729335600564	2.44624272831838
Merged-chrX-77356591-1	2.86112277055371	0	1.41874672798603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172305349-2	5.09132142247799	-0.363834088849728	0.737606266372676	-0.493263283457384	0.621826568033084	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45055169932081	2.78672903181009
Merged-chr17-27629404-1	5.58383204915158	0.0569160669254899	0.795531975232045	0.0715446628136957	0.942964279820046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90329117160805	1.91271412622169
Merged-chr12-8510477-1	7.73947118892992	0.286476364100459	0.6352731206409	0.450949921840617	0.652025642181334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12219448356308	3.59204202250581
Merged-chr11-90418161-1	1.39865063267888	0	1.47115776658693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59170110-1	3.63599703455314	1.84193790484534	1.21433340745977	1.51683046314146	0.129309493662817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.47549643264008
Merged-chr4-132599939-2	1.47008895088471	0	1.69226053922707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46947546-1	1.97230679885709	0	1.42594297610719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25391117-2	2.99097212800971	0.769954450002636	1.21869862564825	0.631784129233003	0.527527945610262	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.18984215491549
Merged-chr5-96851637-2	7.88033857653931	0.353729950602512	0.92717779883044	0.381512533031651	0.702822973174709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.25163494309627
Merged-chr12-89291449-2	3.28969747519925	0	1.43260708941757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41347537-2	4.38648670441332	0	1.36597978536756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45244880-2	2.3743830822948	0	1.41903209569384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91453410-2	4.6476075662407	-0.0337923536410053	0.993010660022646	-0.0340302022943386	0.972853066694921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.13341594473881
Merged-chr11-59219162-2	4.44933823941523	-0.034145104567397	0.934786236174301	-0.0365271794192638	0.970862007123255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.25298535761957
Merged-chr6-135161009-2	8.17521679215899	1.52734032211423	0.676178938108225	2.25878127228769	0.0238969940326611	0.363495185980616	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36164355598011	4.44885153933941
Merged-chr4-63207076-1	4.22141188662975	-0.39672966024958	0.770968249425493	-0.514586249881513	0.606842175581987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	2.12382511851675
Merged-chr11-69037416-1	1.96086643632133	0	1.48849629792769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49986388-1	3.74124361226802	0	1.45341554689852	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66904460-2	2.88799368279376	0	1.42423930494479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165957657-2	2.79435256806372	0	1.40686127115566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103406620-1	3.43115586144877	-0.663310851988274	1.34746976748886	-0.492263995818189	0.622532729047973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.303163067301871
Merged-chr12-32920412-2	3.83126778246299	0	1.42235214857602	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94504376-2	4.29946934672037	0	1.41304674834207	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124908413-2	5.59024379436113	-1.65569609026728	0.992214593553957	-1.6686875006916	0.0951793275551584	0.882097102908603	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9201122043568	0.723581231604105
Merged-chr6-142746501-1	2.18416811714983	0	1.53815435730074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67105543-1	1.11216424974678	0	1.8519934814915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38571339-1	2.62168813146933	0	1.43738968953011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53467307-1	1.44002633706451	0	1.81680664094823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8861734-1	2.52624678468005	1.73367607145527	1.29865008489242	1.33498321959367	0.181881838597564	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.14143228603163
Merged-chr4-55364529-1	2.39569368227321	0	1.45526996356166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78912320-3	9.38720198216924	-0.923027324149284	0.657248499602667	-1.4043810289522	0.160205417002123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99416459083	3.00393455483044
Merged-chrX-164967682-4	3.60517321540024	0	1.37495266985948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-68220745-1	2.11987704524015	-1.63888834221507	1.279124258288	-1.28125811983942	0.200103017831593	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	0.67591700901439
Merged-chr15-101317982-1	2.30266965297243	0	1.5531301702535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59152159-1	2.92284470833236	2.15995159658119	1.33532141989325	1.61755182265694	0.105759218869505	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02674429890598
Merged-chr1-172391053-1	5.89322347609257	1.5482491278697	1.11548934881289	1.38795509748019	0.165150718641712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.38647389072186
Merged-chr17-27767719-1	3.67142567916143	-0.0372724897887917	1.28376025156113	-0.0290338400363044	0.976837601517422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr4-133903762-1	3.36164164947974	-0.258684149698864	1.05339975739923	-0.245570732176298	0.806014547875356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53837419804873	2.35163392625407
Merged-chr19-16457319-1	2.4291536367141	0	1.42540424311831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143917055-1	4.56116192861831	0	1.37357613412835	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70847905-1	3.54285433383384	-1.04086893748036	1.13931610441844	-0.913590998532994	0.36093179803029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82988036406229	1.39949824061849
Merged-chrX-135091314-1	2.36379886441598	0	1.39487656437921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78841945-1	1.99146852221161	0	1.47532734663868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85280547-1	1.52275025454216	0	1.71387659071904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-27021758-1	2.17375444080366	0	1.41359810608426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69031897-1	3.52179198058702	0	1.39661261933823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34142633-1	3.65980138627897	-0.496108427216592	1.34098175410348	-0.369959118159865	0.711412951550948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.465515277017237
Merged-chr7-82303685-1	1.57982044272088	-1.05583546915479	2.45335447441125	-0.430364009835214	0.666930871263284	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90209035375395	0.88866493597531
Merged-chr4-3790018-1	2.69222842543573	0	1.4084071875889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33239849-1	2.82910866931741	0	1.39892065856393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31103019-1	3.62165853522934	0.0107734358969389	1.02209329177188	0.0105405602244609	0.991590005464823	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76302217368042	1.70266130792036
Merged-chr7-69993149-1	2.80662081254153	0	1.45947974052977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123253384-1	1.46852784099665	0	1.57673883022218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82092401-1	1.41978671818264	0	1.64858135769131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99239310-1	2.68581415539553	0	1.47843373371151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11531466-1	2.12918304587319	-2.15533174184151	2.14970900500931	-1.00261558044326	0.316046375456136	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11039133983348	0.67591700901439
Merged-chrX-101416752-1	1.67042269468709	0	1.46248531656909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176825909-2	3.13133174841342	0	1.42189724353385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67956770-1	1.52521987847235	0	1.46103323941873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60841749-1	2.54154034233637	0.834967706512942	1.04730221899022	0.797255740867231	0.425302519148446	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72440493147381	2.80777832397787
Merged-chr3-117265889-1	1.22227686289466	0	1.5883468290826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47772077-3	5.68704648031775	0.623710929543542	0.776814416472305	0.802908540724512	0.422027599203219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	2.73194986207069
Merged-chr13-34647763-1	1.88426675476316	0	1.45490337564718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97292993-1	3.05605145506202	-0.542129319734851	0.960992090165245	-0.564135048855221	0.572662226799573	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1552264446993	1.4068548238317
Merged-chr16-22798721-1	1.55801291125029	0	1.53792749126365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78138123-1	1.59095127748933	0	1.55427888838072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46314647-2	2.18777306318962	0	1.42890435322179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44272012-1	1.38291903918789	0	1.52669604990019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117976483-1	3.11068147431176	1.12712964085354	1.3300651295161	0.847424397377898	0.396758610472229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.67591700901439
Merged-chr16-26349011-1	1.2144219951526	0	1.63757319024214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96375506-1	2.05123413277441	0.231578684401909	1.11771158846451	0.207190018240793	0.835861462473529	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59652745948425	1.69393793853868
Merged-chr19-34436007-1	1.89175281162225	0	1.47383314262335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67232669-1	0.820605339778833	0	1.85512522977796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62852273-1	2.8064193429207	0.444847300926836	1.00441002289837	0.442894127682204	0.657842315124886	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	1.62805269464997
Merged-chr5-110330687-1	2.87565679297351	0	1.45798933567069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56322244-1	1.63588378693443	0	1.46130635573006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131975225-1	1.74947497463688	0	1.46958034549777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-123991031-1	3.71192498093966	1.20339639708595	1.1144093960797	1.07985126589859	0.280208417833249	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.85774282263707
Merged-chr16-28914834-1	3.9629246850209	1.91846362196603	0.942028038962784	2.03652496806607	0.0416976685379394	0.522268102316555	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	3.38975635584332
Merged-chr2-33847632-1	1.70250945349121	0	1.52435140868655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65387064-2	2.4382354199724	0	1.41369525501795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30745417-2	3.57722997118828	0	1.41651475832596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-147178316-3	9.38566712619232	1.21306290835258	0.575074250130605	2.10940223471505	0.0349098767713307	0.467604506539613	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93978512619004	3.86896133864667
Merged-chr1-80475171-2	3.42455099148541	0	1.41642313275042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123068012-2	4.55652259357531	0	1.39165381652904	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124702927-3	3.1010782675843	0	1.39668920239652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128345097-3	3.31119126351044	0	1.3968526422709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94821439-3	8.52730091632073	0.639525871960135	0.562344888991106	1.13724848305725	0.255434424239606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78710103241185	3.74027392652654
Merged-chr3-8987229-2	6.68539215798579	1.1743921021513	0.68908709043927	1.70427238943435	0.0883302107289979	0.84134254862758	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	3.14703568255853
Merged-chr19-45311104-4	4.05432434967815	0	1.38822418068286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9281436-1	2.67325384064195	0	1.40058002612564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36371699-1	1.7234784440248	0	1.47251642571132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54666168-2	2.62421614605321	0	1.43956527895212	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140959392-1	2.75727404850212	0	1.42574171795337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134773560-1	4.93171374413719	-0.935028484081779	0.946625618682426	-0.987748974492378	0.323275602800217	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07454628738135	1.5645819449897
Merged-chr9-22327243-1	1.62874863092413	0	1.6085526068383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80057799-2	2.7713461211308	0	1.43105337467695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11450862-2	3.29535897197833	0	1.40453873590493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29403119-2	3.08298946761453	0	1.43182775157734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66266374-2	8.36391995244002	1.35541622872356	0.665469363554224	2.03678231178725	0.0416718616286148	0.522120651434313	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54410203638168	4.42670876203165
Merged-chr4-141912261-1	3.30529439247107	-1.1148009113779	0.974311059646038	-1.14419404392567	0.252543172651309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	1.39234354082305
Merged-chr10-26760537-2	2.6174331961768	0	1.49029848934274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91087605-1	2.89360425252591	0	1.39538767735836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35937899-3	9.2678933528911	-0.332835254570223	0.614656741710425	-0.541497769379429	0.588164534725462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83301318468057	3.3683970920922
Merged-chr1-194993755-3	4.07295205825619	0	1.41603235589935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-35150491-4	3.81116545850485	0	1.40720225558783	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46009167-2	4.02761153691358	0	1.3922448443313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-48998759-2	2.19119061112062	0	1.42703728024983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171614160-3	4.1147191387672	-0.680286428146358	1.39308335637487	-0.48833145915735	0.625315081861413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.303163067301871
Merged-chr9-96526190-3	3.75163015084448	0	1.38364883695872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3763310-3	4.26019725039116	0	1.36541222499889	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84584429-3	3.89198249412662	0	1.35985842388202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167994282-1	1.49888396971533	0	1.59167603928947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-14764996-1	2.01907507188067	0	1.42544522304294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133941293-2	9.53528052482038	-0.0579078151861694	0.706170790203346	-0.0820025636708856	0.934644674809442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92992083528532	3.45069874123251
Merged-chr3-135604815-1	2.78648643103991	-1.90809898282219	1.37874492164063	-1.38393908320014	0.166377108201615	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr1-161027400-1	5.21009418341757	-0.206390172782814	1.04235411670538	-0.198003892799082	0.843042018018415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60587338187834	2.8584241056206
Merged-chr6-84058789-2	3.35642154174395	0	1.41914423149951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24363727-2	3.94846378984876	0	1.41391260009969	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82992298-2	5.72053929435232	2.20199642975621	0.836451267012701	2.63254599113755	0.00847475482037215	0.180234427731068	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	3.94347566625814
Merged-chr8-124346668-1	4.31676716426593	-0.356582310349255	0.769892994239254	-0.463158273964554	0.643250922461157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81564033530238	3.54920584270756
Merged-chr15-50363118-1	2.16208861368021	0	1.45760165443681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77283840-1	1.59545905891815	0	1.58231814123691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3604138-1	1.87235694592165	0	1.61078697398868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17568014-1	3.27229176558922	0.429301223246483	1.35056543832024	0.317867769354756	0.750585241892807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.67591700901439
Merged-chr6-72103516-2	2.72829914754981	0	1.45481653642536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19969284-1	2.40925818115544	0	1.42677567294872	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75715131-1	3.26859393636505	0	1.39132799337123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40094238-1	3.10178521267984	0	1.41576672526423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46953593-1	1.9612819376499	0	1.45213993144047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80029987-1	1.22521015867743	-1.34694788089609	1.50440826826672	-0.895334005607372	0.370608567297235	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr10-19291717-1	4.47172327552629	-0.330941853228878	0.896718321017116	-0.36905887330762	0.712083842734734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58732124143557	2.3840174190015
Merged-chr14-54647497-1	3.86151685345897	-1.14165409071201	0.840383861764531	-1.35849121175995	0.174307869311747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77262737627126	2.45531426399749
Merged-chr1-39983181-1	1.87638562006762	0	1.41280399696698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37716419-2	2.40486776668985	0	1.44408242475264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152607630-1	2.18187562346815	0	1.51637215375966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34302680-1	3.35211619065396	0.0411723454038894	0.85885098187552	0.0479388698071685	0.961764961360722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74034206253736	2.69873605693072
Merged-chr16-38821177-1	7.51369169802316	-0.0258437498053728	0.618807484026738	-0.0417637964512015	0.966686996064293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70321591943806	3.16929931589704
Merged-chr1-192736209-1	1.86076972831094	0	1.55453757815638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41129458-4	7.61845355771114	-0.999706513028203	0.724343322199641	-1.38015562840057	0.167538732524123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83977088234384	1.44422453547533
Merged-chr2-31765641-1	1.92374320747782	0	1.59542082039241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-52368421-1	1.99328042423592	0	1.52523539101324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145588614-1	1.85928110176749	0	1.41778515097913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120457697-1	1.49824718677691	0	1.46449331466576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79655737-1	3.34332599964403	1.67743595834921	1.09226819091204	1.53573634415606	0.124603057482576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97898450809916	3.73838322053699
Merged-chr14-29941103-1	4.60548972097848	1.28006575592971	0.852380572811431	1.5017537902203	0.133160706412698	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11480110409737	3.62926582552235
Merged-chr3-55354885-2	3.09009425687556	0	1.4102886550974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79661616-2	5.53113648682585	0	1.37650360789058	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3817961-1	1.16570415838494	-1.04466167420708	2.31875339866569	-0.450527285397501	0.652330284491237	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr12-81889159-1	2.15640156071797	0	1.42201109820043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65789193-1	5.28940143854141	0.685080327709177	0.917901100666437	0.74635527423573	0.455452829572589	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	1.46573328458049
Merged-chr16-20354256-1	2.10642289314445	0	1.60694155059195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34066227-1	2.60506671569824	-1.31561635213485	1.16049353066346	-1.13366969946201	0.256933124279927	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84263888870065	1.09266895777963
Merged-chr14-33392990-2	3.6410708811729	0	1.39987794020332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61497796-2	3.59613052694145	0	1.38149752166589	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40627400-1	2.60545486948599	-1.68739474200016	1.39943646776852	-1.20576730767265	0.227907224278926	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85212475157961	0.878778741524029
Merged-chr18-46264492-1	3.06036696558958	1.31404764134128	1.54188051228798	0.85223701244617	0.394082557665874	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.990331813111976
Merged-chrX-38564155-1	2.04441431855184	0	1.4811051620919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23445217-1	2.19202081388491	0	1.4989557541592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5022834-1	2.13983995027366	0	1.44700998984091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8137325-1	2.48470809548705	-1.2589413291864	1.26383012369477	-0.996131762950806	0.319186128767036	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77338015316878	0.67591700901439
Merged-chr8-74972544-1	2.07150545310047	0	1.41339227418213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-52450928-1	1.56877146539657	0	1.75624251432815	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51217183-1	2.12380460186441	0	1.51771042447456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61909470-1	2.53568912068652	0	1.4681316716764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118026777-1	2.62863633425457	0	1.47977485625408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-13251216-1	3.07426934787995	-0.64531042524063	1.20660026946231	-0.534817073700968	0.592776355526476	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	1.21849460895724
Merged-chr7-25599823-2	2.63331492103857	0	1.42428745041126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107334302-1	1.97186172055292	0	1.42510078424187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28757433-1	0.740818321220177	0	1.9125069930518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18938136-1	3.39960466558201	1.49628980972989	1.8014904952448	0.830584348726507	0.40620847946058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	1.88772147529987
Merged-chr10-54121365-1	1.95285703468758	0	1.52189413733477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132701594-1	2.58667504642254	0	1.3803188503071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24960153-1	1.72116800371511	0	1.46967867164811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95305645-1	3.42911253339309	0.556250737138647	1.08177154780201	0.514203519466623	0.607109707387384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75238521850622	2.93399823058711
Merged-chr11-90666309-1	2.82047617795293	-0.81609607867736	1.08919721527474	-0.749263831409543	0.453698202973891	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26611452293889	1.56163052678955
Merged-chr3-127301851-1	4.4038656315171	0.054408169961603	1.14550987266992	0.0474969018248529	0.96211719953638	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9635581111928	1.9949421636011
Merged-chr2-27769370-1	2.06603520342989	0	2.08116931926819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119972268-1	1.94927386219913	-1.72571660145611	1.5523983228244	-1.11164549464108	0.266290603468127	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16448544747254	0.724326877898254
Merged-chr13-35388595-1	2.19105683375727	0	1.44608843080083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85221063-1	3.60774930317569	-1.03681717527697	1.09973886204338	-0.942784883813697	0.345790945114679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.09325667247081
Merged-chr14-103387263-1	1.30937747638069	0	1.53458464913523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122396989-1	2.24509769207892	0	1.39975177334739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-11129312-1	1.42453543840987	0	1.53505435484586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70883229-1	2.76323944265738	2.43507801070792	1.33062524907683	1.8300254052727	0.0672461400129943	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18984215491549
Merged-chr17-28218443-1	3.20542037707115	0	1.40992538409198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117034931-2	3.06769409998814	0	1.40924735307842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115479123-3	4.13654102108216	2.75398966452541	1.2421796532176	2.21706228836689	0.0266188353606615	0.392559216323983	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr5-124351323-2	3.03739516733157	0	1.39990555176554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47721224-2	1.75761714242487	0	2.39419409213711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100449640-2	7.49379697904975	0.26669929711543	0.64868985658342	0.411135297413323	0.680973328973611	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09310968683703	3.55819755062014
Merged-chr10-8914870-1	3.17174189971254	1.09158452327108	1.31713757258944	0.828755132332202	0.40724298165563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.859510663435501
Merged-chr6-37143220-3	3.92564512094446	0	1.37521269817671	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5510058-2	10.2341201656295	0.87761009253782	0.696456682373359	1.26010721807871	0.207630686756011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67395361090298	3.95813007993713
Merged-chr2-51108860-2	3.87428162688476	0	1.42371480331585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34693223-2	3.36536979237209	-0.694008346796941	1.38623475808481	-0.50064272501417	0.61662258780936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr10-8882489-5	13.5561792612157	-0.799337659441491	0.573025894666261	-1.3949416019097	0.163033450498833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.59545194705558	2.93218048579882
Merged-chr2-77919184-2	1.79892690473519	0	1.48986656551299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84601681-1	4.74149096636003	2.22447462555015	0.918922546976751	2.4207422408653	0.0154888556376798	0.273097211679739	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	3.32688001049031
Merged-chr8-125352557-1	3.73442847832596	-1.0073160243143	0.83787400578188	-1.20222851808644	0.229275003117916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20642815764035	1.56203317187393
Merged-chr6-114907719-1	2.88435161486665	0	1.42078415334187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80217687-2	3.51064491617419	-1.17826783360865	1.05656130597769	-1.11519116490675	0.264768511322574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39401765632919	1.60310561942228
Merged-chr15-73441236-1	3.01010682268388	0	1.41837061162067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-25424625-2	3.39400337534475	0	1.4383510794356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77836087-2	2.20580937940234	0	1.39802303410183	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61866515-1	2.61276122100425	0	1.40840118320926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-80275236-1	2.05736970498381	0	1.44837020113394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55956971-2	2.85462399913288	0	1.40218713432355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115908780-2	2.53126529447662	0	1.39826298342003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-65519831-1	1.17320702637265	0	1.66886808423262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94150725-1	1.04416731406174	0	1.96938290169536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33184757-2	4.23035284670149	0.0812374158006122	0.98481045816404	0.0824904072932585	0.934256746208747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.20253745507858
Merged-chr7-81959828-2	6.44897826693692	0.464554843856997	0.581833266664625	0.798432936844725	0.424619296063605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5681280110541	3.96300872860526
Merged-chr4-107164226-3	2.97766717182141	0	1.40511267356226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101135578-3	12.3205766672246	-0.813972574131031	0.506692949076006	-1.60644148614141	0.108176941788788	0.957094788199337	C57BL6J_F1_Control-BALBCJ_F1_Control	5.10404291651068	3.54681379060191
Merged-chr13-37594882-1	4.68002702197671	1.05559695527794	0.853022618016811	1.23747827195027	0.215909576022995	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88456143589366	3.40693902151367
Merged-chr12-26401928-3	4.43015452173445	-1.52329159001744	1.20226034946146	-1.2670230626002	0.205147043614454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	0.465515277017237
Merged-chr15-72873264-4	3.64244043990998	0	1.37463280435999	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31025107-2	7.83230482811716	-0.314055983544531	0.763414841528521	-0.411383125478308	0.680791625372335	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26013325920287	2.37055421370525
Merged-chr6-58770945-2	3.11762774901187	0	1.36837420820235	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85823397-2	3.13895492591416	0	1.37835386468424	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-95851201-3	3.7022578195068	0	1.40733102659141	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-109954117-2	6.4981805123146	0.534131914368625	0.636349420733143	0.839368901684939	0.401262329318971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02096333774854	3.66040472579859
Merged-chr14-79519020-2	5.37395951578451	0	1.36812262091756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80899877-2	2.63819766142551	0	1.4075530954476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42004639-1	2.3541121987096	0	1.42977749611942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119517247-1	1.91728186481387	-0.981779243048342	1.60631115991536	-0.611201159244935	0.54106641603708	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19664257419518	0.577068348605183
Merged-chr9-118716481-1	2.02266432763491	0	1.51127729922661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33146539-1	3.14717629174827	0	1.41252953929603	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61667663-1	1.45536131326687	0	1.70263431742574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72984223-1	3.54077438299235	-0.496576318244262	1.01539193739136	-0.489048908069935	0.624807071762883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90927269178975	0.88866493597531
Merged-chr1-156458780-1	1.74668501324497	-0.680605264730965	1.50482856512679	-0.452280931199377	0.651066611380904	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr4-109207675-1	1.60463242537797	0	1.50008244199917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-29634410-1	1.63089881644066	0	1.58425592205288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37028350-1	2.16699929523546	0	1.49277810673943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96915380-1	4.55836329641875	1.66047089046086	0.875087967230816	1.89749025542582	0.0577632636788341	0.651037373070235	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	3.27474756182193
Merged-chr8-88624678-2	5.42143434894241	-0.532497339118628	0.801804389910275	-0.66412375115359	0.506611109820093	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32187653493988	3.59595246027465
Merged-chr1-77740664-2	4.35860371953286	-1.33831908526441	0.715995946104287	-1.86917131660614	0.0615989835197627	0.677927325114494	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01570655310278	2.65716592321755
Merged-chr3-87152316-1	2.2099675622868	-1.99789693428089	1.46934572690985	-1.35971874943457	0.173918942540275	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr13-112803866-1	1.78883703316661	0	1.50456071217119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46441671-1	2.3675090836953	0	1.39025379613605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77849363-1	8.15089213575066	2.23585658059469	0.815099899954151	2.74304607413209	0.00608721438055272	0.141710872168079	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	3.58921256575189
Merged-chr10-84110786-1	1.99242254062809	0	1.55798774738774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68121807-1	3.07954304418966	-3.5651210546014	1.29443434978578	-2.75419225022221	0.00588371953086979	0.138575870874589	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37282624520555	0.601513806634888
Merged-chr7-31094316-1	1.65131626454333	0	1.62758378735717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105716699-1	5.61257125508939	0	1.35614948930068	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13823305-1	2.67090386627986	0	1.40802486217192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70752525-1	2.31183034388036	0	1.4880348794822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14277742-1	1.27379071484166	0	1.55609064928507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130535171-1	4.65819125019773	-1.81690404087441	0.99098251971551	-1.83343702308291	0.066737606022451	0.711860256250375	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30889993389418	0.662147012823607
Merged-chr3-108855019-1	3.29443515620004	-2.00103812201654	1.40538716436357	-1.42383406705064	0.154494511520564	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr4-137951776-2	8.18965308744984	0.13133412148746	0.731573319677974	0.179522842010246	0.857527183338109	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8198205016186	4.05634293312778
Merged-chr9-63930181-1	1.50228378254986	0	1.69761343105177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125558326-1	6.43342592290798	-0.769401234079034	0.562707426341966	-1.36732020595629	0.171524960968563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23326608869362	3.51427711564413
Merged-chr11-100904784-1	2.21775977346065	0	1.48722972918411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11475738-1	1.32202431589986	0	1.57963371379361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66697278-2	6.25422184802654	0.257475221594335	0.673732426777199	0.382162430307783	0.702340886936835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15468803417284	3.82251029948865
Merged-chrX-117671328-1	2.14020701797161	-4.02196617736448	1.26229099307912	-3.18624326673968	0.00144133347581781	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50442746498371	0
Merged-chr4-86711026-1	3.9988479942119	0.422356527590302	1.02834837894586	0.410713466600933	0.681282651198474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73775798795819	1.74828283775632
Merged-chr7-75910179-1	2.90156050747076	0	1.4182004586431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55063458-1	3.08581004433555	0	1.40790517735067	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182991106-1	3.37415142727518	-2.23904231472633	1.28305063874651	-1.74509270882229	0.0809687325424241	0.800250787686115	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0
Merged-chr5-21332762-1	1.83790332859258	0	1.44981277289809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-13599949-1	2.75655772163711	0	1.41198591435541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8648854-1	2.39586603338177	0	1.44337575092891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148533904-2	3.83290331530711	0	1.39488241313299	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87372254-1	4.95172250648932	0.191891567691677	0.75027399409455	0.255761987223423	0.79813462761951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88772579123251	2.13118170172995
Merged-chr6-116135806-1	2.22582919157012	0	1.42427937593296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-6029894-1	1.86832684717875	0	1.47104593342836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16211180-1	3.83952696486568	-1.90156236312449	0.867123712319383	-2.19295394199081	0.0283106976692371	0.408207218727336	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0614174939396	2.06861510361834
Merged-chr11-64834695-1	1.59810408112416	1.23137949667391	1.83831705662165	0.669840652480733	0.502959375557493	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr6-145800452-1	1.95647756770378	0	1.49526440472125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82759105-1	1.29958309077689	-1.29033036031214	1.69746596109206	-0.760150948465565	0.447164361388794	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr2-173227724-1	1.88291070586625	0	1.4552371666718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37688103-1	2.03201821286119	0	1.42821779840207	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91081329-1	3.55450319553801	-0.518358737018078	1.01618144105498	-0.510104510942387	0.609978245077753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26168904957223	1.61141823534019
Merged-chr1-53888151-1	1.93599783544534	1.83635766894341	1.32794011672586	1.38286180665367	0.166707243219219	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr3-59204341-1	2.54573035315086	0	1.40976168170543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103392552-1	1.28810182758729	0	1.51359261880236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-26908395-1	1.24647326138706	0	1.65297107858199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-103528090-1	3.75708595068485	1.02254292273565	1.27893317412435	0.799528031193463	0.423984299540068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48834673140933	2.77355484954695
Merged-chr8-105554322-1	2.59592528197203	0	1.4508351964232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23056518-1	2.59793280305013	-0.303612234271385	1.26747301902173	-0.239541378565772	0.810685814735494	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0.723581231604105
Merged-chr12-111958274-2	3.25050696526949	0	1.40111432158309	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43842109-1	2.18021595317048	0	1.44267505834531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70942205-1	1.44683895862774	0	1.51307130297527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80792738-1	2.34525904464801	0	1.43861266841668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115515448-4	14.9731248387206	-1.06935422972998	0.453628039109374	-2.35733715188656	0.0184065266126201	0.303752392269404	C57BL6J_F1_Control-BALBCJ_F1_Control	5.29452081559071	4.40897000097725
Merged-chr19-17228799-2	4.09405702362783	0.592712155573695	0.942072532344163	0.629157665916495	0.529245840933825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	1.64474942565565
Merged-chr9-42158785-2	7.45244525527846	0.602395430968771	0.702508832060461	0.857491612172253	0.391173248442456	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13938900109644	3.1653471116689
Merged-chrX-37113473-2	3.52378646541279	0	1.38840922305536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124033450-2	5.52263661237141	-1.84561351912767	0.703226096814662	-2.62449520500957	0.00867775144666398	0.183047687578272	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86816681944572	2.23396946753647
Merged-chr5-151108734-1	3.068426431251	0	1.38222045374702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84250012-1	3.7126887084923	0.704622096088275	1.18277002131675	0.595738887010204	0.551349675585675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.17788344834821
Merged-chr5-122965684-1	1.92706799373903	0	1.4510606297799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117217457-3	4.18775798280999	0	1.39121600678051	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151585848-2	3.33393973686066	0	1.40703158043241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-87603190-2	7.08505391248704	-0.227233662497712	1.0150501352489	-0.223864471917924	0.822862761436484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	0.730937814817307
Merged-chr8-48009223-1	1.99633235104654	0	1.46453785186269	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-111687183-2	3.02486760895335	0	1.40940641247326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67131710-2	1.84242132803692	0	1.57142452605349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57924471-1	3.10537142700786	-0.034157805196305	1.18036066303785	-0.0289384475999009	0.976913681701749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.97908007631626
Merged-chr17-5004577-2	2.49125477634925	0	1.46640174541594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126515397-2	2.97679942927963	0	1.40632593929639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89068448-2	2.11218157908666	0	2.272736982723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107080418-2	2.48137155960062	0	1.45849901974636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43904893-1	3.40635664621565	-0.0955103215775582	1.2061560589148	-0.0791857080778508	0.936884912196068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45547307112966	1.74544410475497
Merged-chr9-54547712-2	2.75185141894595	0	1.44535007750971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30691557-1	1.89016564956798	0	1.45465539213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3077894-1	2.26116230626677	0	1.54625837530362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104183390-2	3.56351584835615	-3.22617248912619	1.20806380146004	-2.6705315441346	0.00757312555147873	0.16592806604306	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12591193702352	0
Merged-chr7-67243053-2	3.44373256891518	0	1.37307483475488	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-5406937-1	2.42186211437231	0	1.4582367675426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15748057-1	1.35453986971787	0	1.50971824313608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99658259-1	2.81040227768272	0	1.37979245924787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104111919-1	3.03365768547946	0	1.44570967533034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12880350-4	4.21715688002823	0	1.36799468088208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141571395-2	5.1483193404903	-1.0366669335623	0.796578787503833	-1.30139912062033	0.193121874500357	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41243934094612	2.11651248711834
Merged-chr11-94317707-3	7.79930169396073	0.783543224652694	0.758166123331579	1.03347168983178	0.301383212382416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.09662457429765	2.51364839432071
Merged-chr7-99530083-3	5.75047973619518	0.166802335456541	0.948250613948587	0.175905328193739	0.860368319332318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.45451904642141
Merged-chr2-130221953-1	3.91888556121071	2.63471042722717	1.05870205175151	2.48862314271359	0.012823881812566	0.239701383552612	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	3.7190372478317
Merged-chr3-127036239-1	5.48354231045023	0.351925574711122	0.70467278136141	0.499417011724521	0.617485637179101	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90186301657201	3.51687224502837
Merged-chr15-66804696-1	1.86649493024268	0	1.48130968912298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183398075-1	1.71227794931029	1.85455805729269	1.49728004606661	1.23861802751239	0.215486988675582	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr1-130373911-1	2.19003317835769	0	1.48189265010694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79296363-1	6.89396107471765	-0.495741635990743	0.654439720085649	-0.757505421470848	0.448747119086339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08977906425595	2.7749835015027
Merged-chrX-35956435-1	2.42385186410846	0	1.4035683271596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24776385-1	1.71815042156001	0	1.67534811122359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43425206-1	2.89003659848818	0	1.45646789364626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52875933-1	2.0847933563748	0	1.52589795448306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126156238-1	1.66842134811562	0	1.54708842457447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75855323-2	3.33847017489639	0	1.40490454600014	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40254023-1	2.60045760858375	-1.25412651462139	1.36576380278336	-0.918260179443575	0.358482669348618	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.465515277017237
Merged-chr4-139177602-1	2.76046782804784	1.78328159469426	1.26721398720657	1.40724582643323	0.159354507122248	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	3.85847515943652
Merged-chr8-70342117-1	6.17218589863497	0.948133622800061	0.8907441687652	1.06442866094135	0.287134555798804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	2.3932671121205
Merged-chr2-98835245-1	3.15612267501049	1.15922173156019	1.11082732038137	1.04356609735004	0.296686185201107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84883647187319	3.17952440396661
Merged-chr18-84787946-2	2.71508061285622	0	1.42191790289612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102573374-2	6.35134990521897	0.664438248986689	0.8089053476063	0.821404198838447	0.411416072673078	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08307023099066	3.09810150712586
Merged-chr13-112474004-1	2.08233563707837	0	1.44911552068654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-53496050-1	3.49131279851165	0	1.48605222109064	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70385315-1	1.50252536855152	0	1.60279183230447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-144236476-1	2.40741310312959	0	1.45812181788556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99326212-1	1.4782418912215	0	1.56281466472531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110963052-1	4.30027645982254	1.21711029976068	1.03622468660342	1.17456215384153	0.240169932056438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75122680664397	3.09634728577185
Merged-chr4-145268618-1	2.04726466923897	0	1.42357994272571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88760710-1	1.90758417137004	0	1.5691281178655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59170925-1	1.38104259435203	0	1.68819182088224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-68960770-1	1.40493543506726	0	1.47567853108971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33688659-2	3.05190333646448	0.589416125710426	0.929774060289598	0.633934792208378	0.526123378514301	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	2.49266796147315
Merged-chr2-103952240-2	1.99306718140752	0	1.47242470471986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75137244-1	2.24994764110259	0.616246635144064	1.45055085722815	0.424836283452789	0.670956025592725	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr10-67282137-1	2.16388350797396	0	1.47400761559461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40650424-1	2.11523381279058	0	1.53135100404048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24711090-1	2.02830255488193	0	1.44038304879456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27125381-1	2.50265196043094	1.38463181831409	1.14394205791798	1.21040380387288	0.226123982992893	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.5645819449897
Merged-chr17-80502032-1	1.43936097948633	0	1.52793572445733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55500228-1	1.85063096713128	0	1.42944936431768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127310926-1	2.17715540682629	0	1.44095096312933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38436606-1	1.63745703268237	0	1.66894202429549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98799627-1	2.41457600998025	0	1.41116389576929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91376325-1	2.33429167175116	0	1.50372492733872	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45370131-1	4.04454783446895	-0.128911517343094	1.11678909802583	-0.115430494057449	0.908103909737933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27160705103521	1.83435721696512
Merged-chr5-64321750-2	1.75334344763974	0	1.5032125877313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37583028-1	3.42304559989957	0.0483922299556745	0.81132174567142	0.0596461640697513	0.952437450183869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64164223821183	2.24992080272587
Merged-chr5-117577167-1	2.43427230379415	-1.16104629021505	1.25332565624602	-0.926372395258091	0.354252484795125	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	0.67591700901439
Merged-chr10-42842498-1	2.75397412359287	0	1.39921158006945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9250853-1	7.36277462727151	-0.1285694337897	0.818299221602594	-0.15711787375027	0.875151951317347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1190548193445	3.31847797808566
Merged-chr11-72576672-1	1.35748729607211	0	1.4527106033456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37544211-1	1.91672376894685	0	1.47050183599755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-113085085-1	2.3213015157231	1.21084589082577	1.41735537355	0.854299432183338	0.392939101737538	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.724326877898254
Merged-chr4-11152032-1	1.88865684833635	0	1.46426515573595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79633019-1	3.94749942119609	-1.36155456737725	1.19301224023649	-1.14127460008905	0.253755668623413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14227273603934	0.788686275880602
Merged-chr15-32766464-3	3.69428689192666	0	1.37770626191111	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58360076-2	4.18265274093322	-5.19969474419517	1.19607587063624	-4.34729507704995	1.3782674069614e-05	0.00114035369824984	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15478678495412	0
Merged-chr1-156617459-4	6.59208196886016	-1.00313806471178	0.888564812226125	-1.12894191949669	0.258922335585046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94767211644437	0.837303648891292
Merged-chr10-19128058-3	3.39119482268301	-0.0357712488723931	1.37576855073766	-0.0260009206150359	0.979256604155705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr3-87504430-3	11.7726944518207	0.366607735783814	0.527960417609446	0.694384888631951	0.48744086786667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14904730420719	4.51559006011453
Merged-chr17-67348018-2	3.63364132475009	0	1.39812136659657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46252217-2	3.43662402135862	0	1.38918468818663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128627140-1	2.08208047717804	0	1.687993848331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117837260-1	2.54166259142585	0	1.51125738796068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127355959-1	2.08319437988377	0	1.42685797273999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14173631-1	3.29437005880691	0	1.36957273388938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50789401-1	1.8701941131639	0	1.43054020438475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-58772260-1	2.38505000735565	0	1.40600712463415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58024817-2	5.88375929445494	0.913416622859103	0.994926865000706	0.918074136894931	0.358580053997154	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	1.76267465112669
Merged-chr5-149919829-1	2.49490181359545	0.00791731996979446	1.29636609736995	0.00610731797588428	0.995127095571828	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.841757702988201
Merged-chr6-72490651-2	2.80807578351776	0	1.38170095129874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19715101-2	4.54135028930572	0	1.37895302898928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48435476-1	1.94636931961464	0	1.44173251873636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61099940-2	3.07041883860686	0	1.39653493011505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39834990-3	3.90036651537544	0	1.39948903587042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-119979073-2	3.02610669426301	0	1.38901641211245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152795106-2	2.8667532144355	0	1.44567085837076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5708282-3	7.45154627264454	3.09814572844538	0.946939194320608	3.27174727482706	0.00106885073834016	0.0378406665124932	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.08814875364497
Merged-chr18-65001296-1	2.15723851533732	0	1.39824947021063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-43227870-1	5.86777140189474	0.401576399517752	1.14960052005207	0.349318213164659	0.726850426519676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	1.02674429890598
Merged-chr2-6048124-2	3.47725815034542	0	1.39406438663862	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44753013-3	4.79875384242214	0	1.4275312627733	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87407321-2	6.72971887041125	-0.163729872791417	0.663237917301151	-0.246864463747288	0.805013119093262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53963591733625	3.37337389756859
Merged-chr12-51666875-2	3.58241869760988	0	1.37395917648596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52734740-1	1.13436609706944	0	1.78422708244934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-61694999-1	2.55977946233763	0	1.39046175263363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65502466-1	3.20010194436658	-1.23798777762491	0.984236433782875	-1.25781543451582	0.208458512440834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82856958860614	1.51436894928421
Merged-chr10-34234273-1	2.96358267007565	0	1.40454792727343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141822250-1	6.41232916473711	-0.344229511525956	0.777578911271891	-0.442693990971151	0.657987089434558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16893862401198	3.36952740466454
Merged-chr4-32304439-1	2.12325556889633	0	1.45748591378768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36088399-1	2.07837694846217	0	1.40120133954835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10502781-2	2.62361929355855	0	1.38540286891434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99680846-1	2.27783637895483	0	1.59370935610138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140798414-1	2.11320772216803	0	1.41333917035033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26453481-1	6.63977293238991	0.191464435213693	0.951740949007151	0.201172845839435	0.840563423311412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02269082340723	4.02706339632116
Merged-chr10-127428167-1	1.53831294427581	0	1.52943236443148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172352123-1	4.35820057059265	0.949430214534052	1.10520226814954	0.859055615334283	0.390309833175492	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0.897114879832661
Merged-chr3-88137438-1	2.64195313420722	0	1.40026476816018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105397957-1	2.8516586870067	0	1.39749123012582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76169306-1	1.78250828254439	0	1.44738960067098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36409094-1	4.43448313866502	-0.814169621943341	0.839188812644529	-0.97018645825086	0.331953559427668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73997694814525	2.52580821279976
Merged-chr13-34149210-1	2.25368406223918	0	1.40491846469477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55509155-1	6.39108984851254	-1.12258046123983	0.616280299837256	-1.821542018358	0.0685245055450286	0.723286135324701	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27829043969846	3.14832953384627
Merged-chr18-5803984-1	2.50918484113224	0	1.46978665448438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129495008-1	2.58540511743649	1.53352087622399	1.17150295098256	1.30902007112982	0.190527551993766	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	1.72711687624513
Merged-chr5-61804084-1	4.58102194092217	-0.863869674976939	1.222604925046	-0.706581216286556	0.47982676527679	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4415044022831	2.5369452274466
Merged-chr5-53355256-2	3.47908041118619	0	1.36794517425367	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95915729-1	1.9306425697427	0	1.61426585379979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69681255-1	3.70671961602258	0.947484492259028	1.01563406049399	0.93289948527148	0.350871868170748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14680093235515	2.47248588654001
Merged-chr5-122689089-2	4.81690908374496	-0.85716843727544	0.838640382182014	-1.0220929679599	0.306736901094989	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09145770840793	0.838451940269823
Merged-chr19-24366709-1	3.16847455315879	0.582166518481593	1.10209603152209	0.528235745189621	0.597335722612175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64538595732494	1.91052780912618
Merged-chr2-45270765-1	2.49939258142422	0	1.39869949208514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-92214169-1	2.38525111110182	-0.538749743611019	1.83803716082173	-0.293111453399647	0.769436962516467	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39006831005986	1.4595221202825
Merged-chr6-76420133-1	1.69290797292624	0	1.6055578995414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65795530-1	3.23752532393601	2.10449086283594	1.07454977026445	1.95848616887984	0.050172992428273	0.590719882046458	C57BL6J_F1_Control-BALBCJ_F1_Control	0.984484304269093	2.8062683988595
Merged-chr5-74284648-1	3.23846476839823	-0.350385705196946	1.44027888511014	-0.243276291015092	0.807791369787197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69735600200997	0.988408630094828
Merged-chr11-114648439-1	3.61577885457846	-0.505564875887221	0.832424146875341	-0.607340473945827	0.543624983454344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67156849457626	2.73125691894708
Merged-chr10-67629744-1	2.21439806797365	0	1.40437349520465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103680122-1	2.44597716429167	0	1.42604755873549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-138828055-2	7.8063403477978	-0.255310833833534	0.752165649538296	-0.339434317414326	0.734282569905296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78083628836226	4.19408122813984
Merged-chr19-7070698-1	2.56517999371096	-3.21746715118074	1.32191772511324	-2.43393903422024	0.0149355104525422	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.3778192788498	0
Merged-chr19-53169789-1	1.41195432174522	0	1.76756677164434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12147392-1	1.32576574122434	0	1.50358873570899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-12035104-2	2.2104377888304	0	1.45167079835835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148317423-1	3.73724993859326	0.536121094475463	0.907652442043388	0.590667825746713	0.554743009724372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26383057984126	3.72362082176456
Merged-chr19-11368531-2	2.65636612218869	0	1.4268047839755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8758649-1	2.64388954388066	1.06111139511125	1.1743771104674	0.903552517886628	0.366232728510911	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.79065725465852
Merged-chr3-124338510-1	2.26728620063694	1.32650084125716	1.40054882190267	0.947129311390289	0.343572890278158	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	2.14187424255394
Merged-chr6-17842956-1	1.84839354712805	0	1.40571554191949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88240891-1	2.53380692948314	0	1.56218068932488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-137017901-1	1.95953504835944	0	1.56240819222573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34922311-2	3.48467289220114	0	1.39555664316423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107829142-1	4.10330876179455	0.930756094013029	1.08030482246179	0.861568026598298	0.388925271902134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.88744669294464
Merged-chr8-61877809-1	1.90848889866868	0	1.48085950622526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47788955-1	2.01900573459275	0	1.44314503404946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-44696602-1	2.37239871214191	-3.19725294998359	1.21246201025107	-2.63699227105806	0.00836447373727391	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	0
Merged-chr18-10885948-4	3.5144958876318	0	1.37123612049416	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-89987965-1	1.53074365075425	0	1.54882443386922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122137797-1	3.84075691913674	0	1.39173368562073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45056459-1	1.94546290834994	0	1.51497288629227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131955337-1	2.54269416049985	0	1.43291572049312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99477425-1	5.18200742104427	0.881345039445618	0.962729660295777	0.915464720568435	0.359947715126428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49952550894788	3.27431650990252
Merged-chr11-118493790-2	2.00890309468899	0	1.49842535140947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122660673-1	2.76931775839443	0	1.39825868070747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33944877-1	3.47178658991182	0.204059820386038	0.822386152350531	0.248131391564409	0.804032747987157	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00546756853512	2.63688307251698
Merged-chr2-167886166-1	1.62567644339581	0	1.51521472961163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144636005-1	1.59900769470923	0	1.51126804151621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83598008-1	1.4469779044809	0	1.78030409662801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78493419-4	3.72274469234249	0	1.37682285296219	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134151877-4	4.14682304302709	0	1.37857634590357	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35889982-2	3.03837656372379	-0.68290744995956	1.48549038244916	-0.459718526641443	0.645718269689324	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr19-37515108-4	10.1842387406217	1.0689905947402	0.703861324042733	1.51875171745521	0.128825003323762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09282686802642	3.37420495873368
Merged-chrX-142372615-1	2.74204732623524	-2.5504685839834	1.21741886452699	-2.0949803377446	0.0361727403847138	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0
Merged-chr4-63686325-3	3.46624838393164	0	1.39375393289048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19995827-1	2.50527366196297	0	1.41692746685474	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-147099528-3	7.35111250058277	-0.421311339557846	0.829667287141393	-0.507807582735325	0.611588291518546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06749705576369	2.90613097141355
Merged-chr11-11742919-2	3.05302824615324	0	1.39017769072979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-96107801-2	2.30282425030922	0	1.51549357143125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73378192-1	3.16755389272184	2.81274745641185	1.2348956752551	2.27772071177657	0.0227432229180482	0.352021313952785	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.44790810950236
Merged-chr18-39246524-1	1.98268508103146	0	1.45892049218222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83533219-1	2.74213726130387	0	1.42021974022157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166082369-2	3.97814557900088	-2.82166818273124	1.17232104950489	-2.4069073773971	0.0160882495856912	0.278782645594067	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60572551668653	0
Merged-chr16-33080235-2	3.24972383588293	-1.89168100518067	1.29089253976194	-1.46540548257373	0.142810322518144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr6-115519497-2	2.58580706981792	0	1.41692847875423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166977721-3	2.81327842992275	0	1.41225045119076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35218153-3	7.2681012794593	-0.594972217164493	0.800411039695793	-0.743333347064553	0.457279887016234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28303009614357	2.83454638804131
Merged-chr17-35420588-2	3.67854064038512	0	1.4166419495324	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58583298-2	9.63949883698318	-0.472686616130836	0.646751200798488	-0.730863144200197	0.464862749799055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.10301998788344	3.59136334386585
Merged-chr7-16263620-3	9.82097299419049	-0.135927426493413	0.469134655638659	-0.289740748971886	0.772014579647311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.29802711663888	4.15290358729844
Merged-chr15-37135791-1	2.36346014853077	0	1.43914022730683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83044041-1	2.46438896194256	0	1.42779574070575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148674459-2	3.2412759500215	0	1.39158545376406	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31955145-2	3.90671997479233	0	1.39145590151777	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114787323-5	9.783813476084	-2.1495091595394	0.831825626980127	-2.58408624334286	0.00976373761900829	0.197818491700213	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51581026779176	1.27992882773773
Merged-chr14-17904485-2	6.56350238884904	0.174144116386792	0.770670395394739	0.22596445565759	0.82122906562606	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08153858449613	1.68580115571326
Merged-chr1-59604121-1	2.02199642739173	0	1.44167173264859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-151813832-1	3.09713104019446	0	1.43822910202228	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98941029-1	2.17622618953409	0	1.44552752427235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135912630-2	2.59272226648567	0	1.49928861253292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64111479-1	3.99024302764554	0.167908044563681	0.946042081893584	0.177484752293046	0.859127641009571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96275318189595	1.96414396348479
Merged-chr18-46470840-1	1.08227876976687	0	1.8495253049791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144170720-1	1.6523528415064	0	1.52816744947599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123201499-1	3.26777950278335	0	1.40655327468028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51540009-1	2.65818287643279	0	1.39914303650277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72170679-1	3.09924775310322	-1.54754021014441	1.29719184174549	-1.19299255541266	0.232872288649707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92086993437728	1.7902295787826
Merged-chr7-130762282-1	1.87823591746544	0	1.45698996214049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81380058-1	2.34594694485752	0	1.39856145120735	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38635143-2	4.37286587614124	0.444542989402247	0.971825195123272	0.45743101911024	0.647361273033576	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	1.67656321522231
Merged-chr9-78073936-2	2.50278629566622	0	1.46031180034468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137102235-1	2.58033266933867	-2.12372976281346	1.31283824450689	-1.61766293120989	0.105735258779898	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr7-89371087-2	2.3298272274267	0	1.46472688753445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42901079-1	3.87206856523281	1.49257308047007	1.12072827777577	1.33178854327854	0.182929683725861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.5682414637086
Merged-chr8-72365946-1	5.56560310949406	-0.789860860703047	0.911104080989436	-0.866927146067965	0.385981928688436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58328144429995	0.882176137820124
Merged-chr17-45546023-1	1.89539629458411	0	1.63037404974558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35609940-1	4.0417876244854	-4.14961230422878	1.26356199701858	-3.28405912335124	0.00102323454031095	0.0365213436485638	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58747054457266	0.303163067301871
Merged-chr4-126310078-1	3.07668710427672	0	1.40503496938222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95173614-1	1.69565376123679	0	1.46634590468052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82640132-1	1.54872886317731	-1.89705800432476	1.61145178844752	-1.17723534636577	0.239101584317114	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.994591904006138	0
Merged-chr3-117366267-1	2.21990037320656	0.585895749477124	1.24513890083097	0.470546498134555	0.637964621776372	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	2.18465264107678
Merged-chr18-60462453-1	1.73317936412315	0	1.52054184941076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95053180-2	3.00334348864915	0	1.37913837485645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44419060-1	1.4854770602653	0	1.51895930697689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105214083-1	4.73539050906805	-3.20369988182327	1.16224349981256	-2.75647907029804	0.00584273518024699	0.137849497249586	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59866712232435	0
Merged-chr7-100527238-1	1.34111750604956	0	1.57813077612293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125334055-1	4.49480390365301	0	1.37131097920425	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180945880-1	3.21003449664047	0	1.41304073960403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25397426-1	2.00678380764662	0	1.46236599955336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93212892-1	1.63004576313765	0	1.45484758605512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40020272-1	2.5112701472325	0	1.46770789655755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75361930-4	3.55410350578493	0	1.3935024495562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-47693353-1	1.93145441967585	0	1.45283111546704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35634469-1	1.92290660552897	-0.117761581338225	1.45534232283828	-0.0809167571713026	0.935508153369237	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	1.19182800327718
Merged-chr12-44262804-1	3.8842763831605	0.585985211421814	0.878644753140363	0.666919377060462	0.504823633032763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48586599042228	3.10952540904194
Merged-chr19-5811315-1	2.68145676855573	0	1.46461685296712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116737645-1	2.53302167326679	-0.117302955782158	1.14568189252078	-0.102387020819595	0.918449485415164	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.28067447403188
Merged-chr4-101739363-1	1.11761375994948	1.09335173247225	1.94506064619336	0.562117039698494	0.574036279460858	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.97019877533161
Merged-chr11-43367988-1	2.02026066191313	0	1.57431289730622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131787741-1	4.17220101154063	-0.98495520915569	0.9853443764525	-0.999605044382339	0.317501681001828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.68120246676765	2.22425996312461
Merged-chr14-61720611-1	2.55519585955134	0.317444850274911	1.22490452329004	0.259158852170999	0.795512677931913	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	1.20027794713453
Merged-chr10-85359972-1	2.15332999154779	0	1.42682090475065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71389583-1	3.74948953655892	-1.16122594183219	1.63916147704122	-0.708426813402343	0.47868024618423	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19314100241055	1.6706727938367
Merged-chr15-67295010-1	3.15098606988259	0.0784258103380492	1.10449057570382	0.0710063191694265	0.943392726217939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.28311275482176	1.67023962132385
Merged-chr5-48839533-1	4.04629776282015	-1.59646721363971	1.03952224111795	-1.53577013602209	0.12459476657233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39684927643362	2.1985101063361
Merged-chr14-51235442-1	1.98135356737035	-1.1695781780488	2.27724911660263	-0.513592548800133	0.607536890172648	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12993703678855	1.3626301568499
Merged-chr1-40444863-1	1.08420840737262	0	1.92121712222597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105214501-1	5.83075712100046	0.0725849667924037	0.838500609845295	0.0865651926070702	0.931017134279957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77593054045931	1.91557369590641
Merged-chr11-97971423-1	2.7877401222527	-1.83735208412959	1.47418956793355	-1.24634722975628	0.212636945583144	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr15-30737093-2	2.25562400323124	0	1.52696808646205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-37144168-1	3.9352800053627	-0.954440141388871	1.00468822033791	-0.949986395847125	0.342119165178119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	1.18984215491549
Merged-chr2-35416699-1	1.4312392049549	0	1.67497845382266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85518405-1	3.22331198670259	-0.226375100377135	1.28273981854692	-0.176477799397833	0.859918588462768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.577068348605183
Merged-chr8-25715424-1	2.42336815636873	0	1.46228880007697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102515642-1	1.19415196517064	0	1.68700023474957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67941174-2	2.73664539159234	0	1.41400166428971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88237507-1	1.91855050835365	0	1.50050109960486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93025574-1	1.52480823989137	0	1.61266070550429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-113276531-1	3.54102539209151	1.31493931773379	1.04052911221992	1.26372179527821	0.206329899386097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4851130237326	3.50097045459851
Merged-chr16-21192772-1	1.45024549536066	0	1.52543385736905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-14184561-1	2.30398358559235	0	1.42364089510437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54794560-2	3.52978894033426	0.00533302679206557	1.19411733821433	0.00446608270510544	0.99643659340822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0.723581231604105
Merged-chr12-4973144-1	2.07032924194117	0	1.43233396461882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139789915-1	3.64716345093251	1.33178891185868	1.02044554695457	1.30510531976281	0.191856987571398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	2.87366179689642
Merged-chr4-141603033-1	4.3152634167046	0.0903455547334514	0.912600418551094	0.0989979326076687	0.921139911581939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73233913320731	2.49511777769853
Merged-chr5-101990365-3	9.39899710278043	-0.929655825196988	0.474760482301677	-1.95815755492104	0.0502115279356962	0.590789707155089	C57BL6J_F1_Control-BALBCJ_F1_Control	4.71778094190356	3.738041507536
Merged-chr2-19140546-1	1.67303579778724	0	1.89899393595851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-121479563-1	1.40978488202705	-2.88881344865219	2.2377590315948	-1.29094035946909	0.196724359064702	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69895031910627	0
Merged-chr5-58305180-1	2.1867880987163	1.19581378363935	1.39571200051796	0.856776887492242	0.391568201330181	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.993458951033742	2.10632750439985
Merged-chr3-19258778-1	2.07246976197093	0	1.44766308114279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149056364-1	5.17236832654841	-2.11065832669034	0.972998554655724	-2.16923069062231	0.0300651741990488	0.423616590017132	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91736041455309	1.27743081564928
Merged-chr8-120276666-1	2.11558806430242	0	1.44721642056243	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110777283-1	2.8152241055102	0	1.43487327236949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74376865-1	0.779317710867473	0	2.02942382223626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114886568-1	1.93518837319209	0.16306456916733	1.33022656356337	0.122584057207908	0.902436479723207	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	1.79957942362569
Merged-chr12-41295962-1	1.59422331582078	0	1.66104912511322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101367468-2	2.89788183787295	0	1.40038888038649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106675667-3	9.04566723665144	1.01426083393371	0.657146964860762	1.54343075167153	0.122726297182963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25049756766703	3.65757801839771
Merged-chr10-8876696-2	7.34146932270875	-0.418535700691441	0.618621386620822	-0.676561964625349	0.498683918493338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.2909045646649	4.01846901486983
Merged-chr7-109210001-2	4.702604057916	0	1.4127938840035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67226373-2	3.77491672400802	0	1.43347238456677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43338500-3	8.74547914356185	-0.586304018308193	0.685732748576036	-0.855003672386491	0.392549114700777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02922331852618	2.5483232218769
Merged-chr6-39567724-3	3.36690028208446	0	1.37366969197837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137949700-2	4.37122215542789	-1.68631285873273	1.06973125844109	-1.57638925237182	0.114936123747532	0.990276964014969	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00267996267207	1.98070465714447
Merged-chr14-52124127-2	3.06100421191559	2.77836590633599	1.17939212931922	2.35576093588123	0.0184848095558716	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr17-27643351-4	3.38912960799434	0	1.40467498663121	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102693102-2	3.11837827958659	0	1.4168113272083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-67997018-1	2.94961966734469	0	1.39128484732436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8648437-2	4.86468552415159	0	1.39603920050972	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-98335294-2	4.43262850575856	-0.719964705707899	1.6736915749464	-0.430165698677759	0.667075111760075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31517291131361	2.14964896035278
Merged-chr11-119305495-2	3.08508438439975	0	1.42256406067882	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18716566-3	4.16189534795666	0	1.39616503725619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75898530-2	7.98107516339772	-0.166970455257587	0.673622090296655	-0.24786962551073	0.804235281971936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55864067482421	3.20492579057347
Merged-chr4-45097671-2	2.9198736935989	0	1.4315647463158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118653139-2	3.19807113596057	0	1.37756712934667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119189514-2	4.48594863827249	0.515877187759171	0.967447896215186	0.533235112482405	0.593870838403866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	1.41437199749648
Merged-chr1-7204932-2	2.87348609426271	0	1.38033893985126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100369196-1	2.18567248611454	0	1.4167332964419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131090409-2	6.06209390336578	-1.37020691868291	0.592974033646577	-2.31073679610663	0.0208473974795137	0.329622943452264	C57BL6J_F1_Control-BALBCJ_F1_Control	4.0505309163806	2.85476293333406
Merged-chr4-55630894-1	6.16124353335432	-0.763903518310447	1.01221892912194	-0.754682111085498	0.450439742608783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08225890031947	1.30770410644824
Merged-chr16-28518868-2	6.59415631314919	-0.761942301259022	0.559884522853759	-1.36089188066026	0.173547859771074	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8365555241165	3.13740203858764
Merged-chr8-95204108-2	2.93071395222724	0	1.40850445500252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80629511-2	3.02678681886477	-1.74051447367769	1.35928442235664	-1.28046378303968	0.200382074208194	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr8-71709935-2	5.16281554503933	1.16191290910631	0.883532043304019	1.31507727185679	0.188483934212833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	1.92611868668269
Merged-chr10-54131914-1	2.17106422040414	0	1.42517497038379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107139906-1	2.20147961535182	2.40616474945078	1.47100478499407	1.63572870326216	0.101896379412493	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.788686275880602
Merged-chr14-19916689-2	2.06227599779284	0	1.42528849047799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31344443-2	3.84609451331266	0	1.3849104570329	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108343500-2	3.28397029529381	0	1.50318579840503	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47638191-1	2.20861996975244	-1.2321703677721	1.52110632166911	-0.81004881132835	0.417912122582612	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr16-87634924-2	6.5865554363685	-1.85493469642506	0.695819831707562	-2.66582614047231	0.00767993986805665	0.167542425835445	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79221991904376	1.43926704001285
Merged-chr4-117189553-2	9.21405519721176	0.129296920771122	0.704696690603219	0.183478824996956	0.854422331945391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21223900508026	2.40426121253539
Merged-chr15-60835123-2	3.3800392541245	0	1.42229805610649	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96963775-3	4.01916174646132	0	1.38940337045736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123284160-2	6.48982435135598	-1.12360001700893	0.587743057039113	-1.91171976181108	0.0559121482014448	0.637443050352839	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24011832717172	3.08091669414515
Merged-chr11-98975474-1	3.20361762657763	0	1.39058283863711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26581709-1	6.5641130446352	0.0337515263327224	0.661457784218456	0.0510259719334944	0.959304824890929	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40889715280424	3.43422201483564
Merged-chr14-45644278-1	2.21793361236761	0	1.4696476931728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153790852-1	2.59093019488202	0	1.43216602502256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32949512-2	3.20744644090226	0	1.44924756197978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65448834-1	3.13030491080178	-1.86153939316428	1.35770782917942	-1.37108982739635	0.170346955698379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr16-39192483-3	11.0471974480482	0.865131712832273	0.563933888886163	1.53410130137952	0.125004733223362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94927155803805	4.33248650988041
Merged-chr8-125518015-1	1.64779792077946	0	1.60823033911977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61087978-1	1.93757042616689	0	1.48530807077982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5705043-1	1.67003516816823	0	1.43574154055916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171479070-3	9.3441031359937	0.0492340490754646	0.51405560936495	0.0957757257746627	0.923698696740124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26247627553437	3.88336610294865
Merged-chr4-138429945-1	3.29761191085057	-0.386819208840535	1.04769101050776	-0.369211155732897	0.711970341334369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.338064021838
Merged-chr2-3660127-1	2.17083232929435	0	1.40330516521513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66706012-1	2.73397670870361	0	1.43148552423615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-62847934-1	4.03363121434088	-1.02794169504473	0.984090088094107	-1.04456056155951	0.296226115205491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51230400961377	1.89822571976554
Merged-chr7-125562872-1	5.51682950522465	1.28759018284316	1.48124634933946	0.869261337533313	0.384704204715856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84883647187319	3.31009649690977
Merged-chr8-117407672-1	1.97514334406137	0	1.43813405768894	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181436518-1	1.86771517972984	0	1.49473958746632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9694956-1	1.84292065578168	0	1.57115273631656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15860202-1	1.85336889885374	0	1.47283338612348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8557284-1	3.82959441757506	-1.07639309028812	1.25440192773271	-0.858092662719085	0.390841298559227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2037485121767	1.7079953405313
Merged-chr7-126772881-1	0.850001333982022	0	1.79344277825686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57341043-1	3.95070224665828	-0.0865000874125212	1.03424463040502	-0.0836360033879481	0.933345840642682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8405601103675	1.31096605903064
Merged-chr5-3968577-1	2.87944728832798	0	1.40203604361366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58546829-1	2.96475325858192	0	1.42351292350016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151962932-1	2.31393085158081	0	1.46231892190328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90226043-1	3.11959392079331	0	1.41787259296502	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118480929-1	3.89215869564781	0.42742617826857	1.00399764537185	0.425724283556723	0.670308765105846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	2.50352024578427
Merged-chr10-34152093-1	1.93131309069648	0	1.47082755559868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165074744-1	3.05400164460355	0.456287536847034	1.11890080772077	0.407799810044378	0.683420653086968	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.41478649953382
Merged-chr5-54206175-1	2.37961318209078	0	1.42956880970675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143820833-1	4.71777982634331	-0.411967116745635	0.913788598600003	-0.450834161617689	0.652109078011747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3697525094638	1.610618888618
Merged-chrX-94103103-1	1.79904069177966	0	1.47926476632746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53876834-1	1.27733477472479	0	1.81541942820813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88290774-1	2.04510553852521	0	1.45022658087507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119729521-1	1.36887123110733	0	1.65860054051989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37355070-1	1.94993259737565	0	1.44495495601286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58590840-1	2.05767045098109	0	1.42273808596595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53120966-1	5.16941140862913	0	1.39405034056989	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27384940-2	7.24947029237038	0.24085083298099	0.73702153818058	0.3267894091339	0.743827170332864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30255876332307	3.72909535844766
Merged-chr4-63773562-1	1.71952061334102	0	1.55381867806543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3372043-1	2.54634245360076	-0.574399733233998	1.29807230045566	-0.442502111039863	0.658125903023633	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.40418299230996
Merged-chr17-47523226-1	2.9860943784638	0	1.38532674695182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138859919-1	3.51864209897659	0.935307856826679	0.972058729952043	0.96219274412856	0.335952793239574	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	1.91496113347621
Merged-chr6-48429106-1	1.57787418425523	-1.92394646120139	1.55552108388941	-1.23685013409833	0.216142725708719	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr17-34183092-1	2.74717709134666	0.504664013680959	1.4336682398905	0.352008923430922	0.724831570322567	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42512484922428	2.14347975176101
Merged-chr3-60515666-1	1.98629940144804	0	1.51714331936737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75028414-1	1.96234395168723	0	1.56837458103369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86887843-1	1.46684856291911	0	1.70387438143862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38068827-2	2.95976940891063	-1.30019473498107	1.36924280176718	-0.949572079767746	0.342329730833314	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	0.600815099743027
Merged-chr5-140510755-1	1.66743983296546	0	1.47334748900817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-98591218-1	1.4875777872593	0	1.58447707986255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62155332-1	1.11809890332507	0	1.65195692863258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47146521-1	2.18707235229758	0	1.42660040739116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51585965-1	1.30250157409964	0	1.53949700010279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23741573-1	1.57714060212203	0	1.75946109878138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72142770-1	1.13172006602136	0	1.90932452012002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47788180-3	8.76546983255385	0.105769967276805	0.508326701515841	0.208074781358911	0.835170577769912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.54208655879031	3.6983108439275
Merged-chr2-105424932-2	4.3352134797704	0.25491875358473	1.29398886313769	0.197002277876331	0.843825755227739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42414254605024	2.49533076724165
Merged-chr10-8864060-6	9.95613854240638	-0.243588503568386	0.573977494488663	-0.424386854723966	0.671283705891083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12342749984879	3.87399481463472
Merged-chr1-82797239-3	4.84445977009305	0	1.38903708998875	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167279247-3	4.31425500090825	0	1.36539142598513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141853687-4	11.3080456286055	0.401575711542772	0.526245761869434	0.763095383640175	0.445406512956547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15094180428848	4.61207570497132
Merged-chr17-46341905-2	3.77905409590575	0	1.37947038432259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9334392-1	2.46288222279725	0	1.51640195263437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-7077969-1	2.78058394506845	0	1.41614615503605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45478235-2	2.76104759937669	0.597772069995099	1.30821769595386	0.456936236104989	0.647716877654342	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.723581231604105
Merged-chr9-123991717-1	2.38621919294371	0	1.39871787565768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102688807-2	5.38845659610278	1.70148572057435	0.833326991901933	2.04179840219862	0.0411715328269825	0.51758634434365	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	3.07684945247441
Merged-chr5-29230678-2	2.11397888708284	0	1.48595903612919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84631746-1	2.0377060953277	0	1.46899315981096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54737063-2	3.77696766583107	0	1.38301921655796	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-119868284-1	2.00235382363248	0	1.42746012933191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127774158-3	4.09220174398716	0	1.37712698376217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43276341-1	3.17177264216043	0	1.41211651246399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132099103-2	2.43392335165857	0	1.63874552465602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-83746231-2	2.42146108334124	0	1.43457246483057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86694671-1	2.55889803660393	0	1.40388830369386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-109530116-2	2.66617835197194	0	1.40127389615156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167680789-3	4.44425613464446	0	1.38380391224914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120549449-1	4.88780837109198	2.35171228632724	1.11207824359461	2.11470038180561	0.0344554918134769	0.463783785977042	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.80457745155127
Merged-chr16-34096019-1	3.14200352235651	0	1.38246735915236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68080071-1	5.3915216348922	-1.54048882319265	0.858730635156666	-1.79391390049989	0.0728269124079966	0.750056485711688	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70122227302391	1.79065725465852
Merged-chr2-60269528-2	2.28932287023338	0	1.39979162305478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-58341866-2	3.73234357139725	0	1.39492098449251	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-152173223-3	3.2457955479079	0	1.37060843704125	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82892739-1	3.19319637190167	-1.77397245631006	1.20310791463871	-1.47449155202572	0.140349290627976	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77338015316878	0.600815099743027
Merged-chr5-63886956-1	1.3614149788608	0	1.48448214309585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-31936769-1	1.10788123477891	0	1.68299002497277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10852375-1	3.3360659845227	-0.721906142514843	1.47047538604594	-0.490933849940885	0.623473234775265	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0.730937814817307
Merged-chr8-13965088-1	3.32818932930865	0	1.41556059323217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-98968183-1	6.25016107369408	-1.19693782505822	0.695497456430332	-1.72098088065131	0.0852542933733794	0.823589503018221	C57BL6J_F1_Control-BALBCJ_F1_Control	3.96241916156463	2.2158378790404
Merged-chr14-88923850-1	3.5522540948723	1.7070190313496	1.29602515839706	1.31711874595155	0.187798824348474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	2.97298273882007
Merged-chr12-8494319-1	2.29767738822918	0	1.42169492093516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35160394-1	5.69454135660035	0.12704645263489	0.969086925164395	0.131099129846725	0.895696889504227	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39645712883637	2.95409587111711
Merged-chr13-95924353-1	1.97120118225454	-0.656746012588697	1.47137637325984	-0.446348075532621	0.655345834056057	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.465515277017237
Merged-chr9-105479972-1	4.11170932924294	-0.327340584996173	0.91612171057719	-0.357311240653752	0.720858815860691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94051118279724	1.85449916425446
Merged-chr5-28372386-1	3.47096019176972	1.28519463165413	0.947321232544155	1.35666190886756	0.174888660880318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.44792682863158
Merged-chr13-112473756-1	1.46989557425612	0	1.54073343448382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21384317-1	1.17290351913728	0	1.59419342571132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143506063-2	3.13637184134899	0	1.40603548091202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11584129-1	1.64217710126099	0	2.16049561798498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66126043-1	5.87951299597837	-0.250936522821656	0.725883577963863	-0.345698029876285	0.729569665016399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36809407398891	2.35225794739352
Merged-chr8-10170099-1	2.38933575199588	0	1.40938944151058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55618588-1	4.5294513841014	1.39620955245813	0.9895806396317	1.41091033569308	0.158271054183272	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63820361928913	4.01712627829786
Merged-chr6-53854632-1	2.11188522456577	0	1.47260479008317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15886863-1	2.36570114374383	-1.23638238077724	1.15752195622968	-1.06812866410277	0.285462477561043	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59660587240438	0.67591700901439
Merged-chr5-129594266-1	2.44133021052852	0	1.44483581139017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158340378-1	1.78925976503503	0	1.45545957904513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142527109-1	1.8645519073492	0	1.47457804595284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95291790-1	2.4407340895965	0	1.40571001696001	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13649741-1	6.21479868209723	-1.56736925285631	0.738056070942103	-2.123645227734	0.0336998206079079	0.456374825218054	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75086488476191	1.98150492821539
Merged-chr19-60883304-1	2.83627009020748	-0.428648848743224	1.06460766674883	-0.402635508019831	0.687216384036232	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4707788411593	2.17516235029264
Merged-chr11-119472725-1	0.90444257848121	0	1.83283825910572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74935780-1	3.4734321340084	1.14906614233118	1.2020441553017	0.955926733026518	0.339109251796758	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36155420913382	3.14632360117949
Merged-chr3-96088019-1	1.53263707338279	0	1.68582573709499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166773747-1	2.80540401901019	0	1.4491094297436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51931540-2	5.90303278562064	-0.0651291948519595	0.671579324600124	-0.0969791541613333	0.92274294897585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54941039039605	2.7749835015027
Merged-chr17-86233950-1	2.67529985407761	-0.129457515686488	1.02087275459089	-0.126810628557099	0.899090283283793	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30302996175038	2.02440219960991
Merged-chr2-181533370-1	1.9839545922199	0	1.44943747240015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22928429-2	2.13262729169195	0	1.46695877665628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129530626-1	2.57566739727655	0	1.43153886990452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70021947-1	1.9663588130195	0	1.50892446812298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8270881-1	1.98517830382366	2.86549778773341	1.52403820962657	1.88020075194541	0.0600807231780116	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.79964231856643
Merged-chr18-5085230-1	1.94142841411384	0	1.42954520187421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121721536-1	2.97051293285588	0	1.40519220355465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44009328-2	2.99061129362349	0	1.38849350215936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74826379-1	2.77848659867532	-0.765389042252121	1.12195354349349	-0.682193168060137	0.495116814107159	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79586598792836	1.27743081564928
Merged-chr7-89372152-1	1.49218871979541	0	1.56711114260889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155700579-1	2.99454443902581	0	1.38686669632707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-89603983-1	3.89940979502601	0.33428712153523	1.13144318855002	0.295451972240542	0.767648636122075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90139991839778	3.15381624134444
Merged-chr4-7455324-1	2.49215112064548	0	1.43861951868618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68187502-1	2.84904507715997	-1.46163713669351	1.05687499386144	-1.38298014919741	0.166670952691439	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48853090112376	1.14478899401529
Merged-chr11-87143646-1	2.73584690339018	0	1.41142065031751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77388410-1	1.84400918636381	0	1.43099510927712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69124738-3	6.5986436354773	-0.323734280786363	0.937114067084626	-0.345458778346487	0.729749494997127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26637849737819	1.30064958020929
Merged-chr13-112509689-2	4.09838606727908	1.77453333588844	1.27425284437232	1.39260692548233	0.163738687626713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr7-140990754-2	2.90063738859189	0	1.42510669721791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99235381-2	7.35267255843986	-0.719265557174571	0.547086876912832	-1.31471908307019	0.188604330684457	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12210631866579	2.87200775335712
Merged-chr5-31772755-1	2.86013254235481	0	1.41157654896886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36019555-3	4.54830428838671	-0.203241062171435	0.857956868157445	-0.236889603329264	0.812742435802163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34710871808755	1.83189312414735
Merged-chr19-17126819-2	6.86860645353384	-0.170368701954008	0.675651903218254	-0.252154550505239	0.800921606606185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65871952545664	3.68657925304921
Merged-chr1-191852645-2	6.79719056953538	0.051600437770466	0.661540732716499	0.0780003939569647	0.937827739616521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30474505539355	3.51055904872825
Merged-chr15-36852579-3	4.32969544170564	0	1.37193466978843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-55096356-1	2.23889901532718	0	1.40794741964343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106575996-1	2.66289134158906	0	1.40739551472705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42911773-2	3.08195038683059	0	1.42537041030203	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33346723-2	3.71663977483752	0	1.40793036815335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11218333-2	3.06528132992191	0	1.37818522231452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121389885-2	8.18648256586465	0.793535176037018	0.662394510986971	1.19797969771013	0.23092492085359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17813337661218	3.06505762537082
Merged-chr17-49983154-2	3.67045478908124	-3.00766046618104	1.29637099003341	-2.32006153277429	0.0203375488858167	0.324101284057695	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0
Merged-chr3-121536885-1	2.53222566276887	0	1.43252190655939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134374120-2	2.80440540778774	0	1.4022770462746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26649742-1	3.32053021073064	0	1.37639997068148	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95590415-1	1.53701696018183	0	1.63369278332186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71988649-1	8.90959870088389	0.703324663474326	0.742078689063633	0.947776393311863	0.343243300727009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07548707252649	3.22990235789112
Merged-chr3-89331039-3	4.13892325863942	0	1.36694455931938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101653048-1	2.3740634514634	0	1.41141630096182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73844541-2	3.42002882210643	-1.34423125521904	1.33953954593775	-1.00350247911345	0.315618481381431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr2-76644309-2	2.9749124274935	0	1.4099575803012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180265606-1	2.39458886661013	0	1.4226700048395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-111478299-1	2.86827703716715	0	1.39756652105942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57871163-1	3.91601630896686	-1.64076862258595	1.08620842909388	-1.5105467593864	0.130903967409385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51293337199719	1.40024388691264
Merged-chr10-111925674-2	2.64539060434713	0	1.40240621347786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41662869-1	2.75748526570776	0	1.38807684425415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154677913-2	2.5417549093875	0	1.40854181763285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36497245-2	2.92376780697024	-2.18501603527735	1.32031557307011	-1.65491953578686	0.0979408209094355	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0
Merged-chr11-76647772-3	3.58097701861082	0	1.38402091746724	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-25006988-3	3.92392931338206	0	1.40226213517369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12005811-2	3.61633836853588	0	1.3691161024394	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-113824086-2	3.11555577733909	0	1.3779808901265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115987527-2	4.13705409632444	0	1.40469699334823	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-37251189-2	5.81663281840146	-2.65584921328656	0.89687332438304	-2.96123113608438	0.00306411892305697	0.0863913073332229	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60903350546381	0.662147012823607
Merged-chr6-72940699-2	7.94495640854497	0.498988537931926	0.667752255155557	0.747265971892051	0.454903028492748	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46859289591319	2.75026427321923
Merged-chr9-121679715-2	6.1594218866108	-0.200648208465597	0.696121937436207	-0.288237157421842	0.773165207631298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.70909952950021	2.65195929168926
Merged-chr5-30806299-3	3.70684617510862	0	1.38828846489054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11768899-1	1.50591770118484	0	1.72024041723021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93748802-1	3.52377141158364	-1.70862068060055	1.37006790278815	-1.247106568312	0.212358424874833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr4-72366998-1	1.75563768593147	0	1.46173198169244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45242617-1	2.10296482619367	0	1.42066152639064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-110020502-1	2.39937151783406	0	1.40562126765492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72334307-1	1.10240638003246	0	1.62131283441612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143009464-1	1.83466972699799	0	1.5043962068554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-36095658-1	1.40035777081023	0	1.65595918041854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135148734-1	4.11618093618065	0.31398903652942	0.773953947404744	0.405694728455488	0.684966916081658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39918060752532	2.58074198784182
Merged-chr8-39599080-1	3.6622501808707	-0.694117850322946	1.16569849333354	-0.595452301167503	0.55154117403404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77720628303105	2.00425570563599
Merged-chr14-45588148-1	3.13844632024021	-0.0750325064681276	1.19090761557554	-0.0630044727960416	0.949762942623462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37496550679752	1.7819856964305
Merged-chr1-153931415-1	1.30533134214989	0	1.62072597988315	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125067323-1	1.62066153698799	0	1.47791852478925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23842563-1	1.38011795238889	0	1.49098096910334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60774652-2	5.64542433002409	1.4098912374157	0.713947820846817	1.97478190457031	0.0482929034239862	0.576576748786397	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37441905672497	3.76714667235926
Merged-chr10-83819858-1	1.97134907343915	0	1.43951830976288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81109101-1	1.77428883466231	0	1.44013764144368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96878781-1	2.4647387588016	0	1.4226969226706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136794318-1	2.62946096278173	-0.325784671034103	1.27680626690535	-0.25515591478394	0.798602679203129	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	1.14478899401529
Merged-chr7-43926146-1	6.36309597004458	-0.786441154607727	0.653654186814041	-1.20314559360646	0.22891998443705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84757038392282	2.94825293817724
Merged-chr7-99135509-1	1.82113280952726	0	1.44843793301693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96639405-1	2.10846189039798	0	1.43426794900463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30362554-1	2.48061559393002	0	1.49693459845238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11005637-1	1.94680266885386	0	1.50673683074432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105712025-1	2.87312179505351	0	1.4238430765646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74848038-1	2.01055467340057	0	1.44878389436052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103368656-2	2.92916084049659	0	1.38128525692393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83592053-1	0.947565448643195	1.2153023899474	1.86331182044259	0.652227059697788	0.514254706065757	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr2-90625179-1	3.06727995238837	0	1.45298473054421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50056618-1	2.384017889751	2.66579496587131	1.44018043006875	1.8510145744336	0.064167456406798	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.56533893459231
Merged-chr18-54987146-1	2.53628721883747	0	1.39098297793199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4046133-2	3.94536426657174	0	1.40527498118243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94509010-3	6.64690699600325	-2.50532880056904	1.06343159330817	-2.35589088788999	0.0184783444718667	0.304290920068524	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72678076939999	0.716426531808663
Merged-chr18-23898403-2	2.50996763742235	0	1.40916103204939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102878852-1	4.49968204609942	1.37349607144901	1.22874374742166	1.11780513579914	0.263650227579745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.25298535761957
Merged-chr19-42552788-1	2.70843165561209	1.12002011168464	1.35064161581723	0.829250408523028	0.406962726231689	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.67591700901439
Merged-chr11-19761772-1	3.64900385538065	-1.98709189369073	1.15459084832055	-1.72103554829066	0.0852443734426091	0.823589503018221	C57BL6J_F1_Control-BALBCJ_F1_Control	3.93708630342313	1.52554022439958
Merged-chr3-8973470-1	4.03325662462725	-1.09930785099247	1.01077007611253	-1.08759437677504	0.276774214284341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56406040556804	2.25827590166028
Merged-chr17-51904152-2	4.43203444615897	3.98072588025172	1.1563167398151	3.44259124095035	0.000576169466832074	0.0238901571682111	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.26558385400618
Merged-chr6-131779283-1	3.27146976245099	0.30177938667442	1.37007261470233	0.220265249765601	0.825664582221805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84883647187319	1.92048898258984
Merged-chr12-108630258-1	1.55664607053579	0	1.48923741269528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-63114721-1	1.34661444537055	-0.930670600596898	1.73880130646828	-0.535236888271728	0.5924860613465	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.41385117919798
Merged-chr17-17516518-1	1.32474476749884	0	1.58138067182044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94090063-1	1.37626772414774	0	2.3000374562686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118201709-1	1.72038506211368	0	1.49751944911311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92678760-2	2.82309002791981	0	1.39345953749795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21312057-1	1.86281695565341	0	1.46392624079455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125349864-1	4.03772675392388	3.11430184276796	1.35048745540067	2.30605758706881	0.0211074147789073	0.332188176018129	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.49862868646755
Merged-chr4-151141743-1	2.6876247427956	0	1.44073028559318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83659172-1	6.55372003119042	0.781496771847376	0.788193502026924	0.991503697807294	0.321439687624229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11991144157958	3.39719376002588
Merged-chr6-112796763-1	1.87447044446108	0	1.50775047315977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107057860-1	1.90267063473686	0	1.50033279900029	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21261976-1	2.72476512895922	0	1.43555688822345	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48428337-1	1.71973818867456	0	1.44453835492302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73946263-1	1.90917339676005	0	1.52182239245474	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41107614-1	5.38994999797535	0.415145419284839	0.852794211511947	0.486806094226195	0.62639575119015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94051118279724	1.88902045214131
Merged-chr9-111287192-1	3.94571097364728	-0.114914884391103	0.987209324837171	-0.116403767164636	0.907332549926394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48834673140933	1.81687644892732
Merged-chr1-189675544-1	1.60151930894072	0	1.45206564410455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191307617-1	2.96897593888793	0.358875892948452	1.06679668058879	0.336405145871263	0.736565369541172	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20343104975611	2.43547976577385
Merged-chr13-83069059-1	3.29273505248828	0.97426067802778	0.838596204416598	1.16177568285748	0.245326594092139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	2.85476293333406
Merged-chr10-95894932-2	2.92697617415126	0	1.37992134354601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63385565-1	1.68349199496225	0	1.72273424344189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80809734-2	2.07955572942557	0	1.58512412819712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43890325-3	3.23777339447376	0	1.38134941263956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-123687690-2	4.45263772788396	0	1.36921458122615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45438224-1	1.94317929565161	0	1.41755118408003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158134081-1	3.02336435211492	0	1.41062955953473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142630603-1	2.30965269293938	0	1.4455979468857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23810888-1	2.25090419379958	0	1.42701118606534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103107727-1	2.48544155086162	0	1.38935294719535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-125849413-1	4.05526632640508	-1.14123817701081	1.11143353940513	-1.0268163921179	0.304506929179516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25516725910401	1.26296211256663
Merged-chr18-36493646-3	7.41513277423788	0.395990690002483	0.661206299990632	0.598891284018457	0.549245384058566	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30989861512959	2.79671244268192
Merged-chr3-142890614-3	4.29761481357268	-0.0397655399844809	0.938542660653265	-0.0423694538901433	0.966204178738047	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.44790810950236
Merged-chr2-30750203-1	3.17693292798525	0	1.43069424754392	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75593393-2	3.75465429851171	0	1.37128115292127	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120909990-2	4.23632196104692	-1.54299591217357	1.15697692520639	-1.33364449934757	0.182320391901536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.465515277017237
Merged-chr19-60310772-3	7.49640002980006	-1.78172820582698	0.800424878624659	-2.22597804417131	0.0260156521020477	0.386389298528746	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48677498837143	1.58056713942428
Merged-chr16-90281142-2	2.99799009832065	0	1.39063140538373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106961203-4	6.39008474205847	0.492546911978002	0.820892974753045	0.600013554904863	0.548497201881302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	1.83076147239238
Merged-chr16-50737300-2	4.37624841761203	0	1.37808325261951	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119457354-2	3.14942168935709	0	1.37898735528183	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102619797-2	2.87063673988685	0	1.4215569215883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-73239010-2	5.44352224485468	2.33779254782403	0.818633616131172	2.85572507866504	0.00429386760345185	0.110259084686699	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	3.58659535203741
Merged-chr9-75582122-1	4.73757603549292	0.345302664595277	0.70272185979106	0.491378857487009	0.623158515013143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60073253909927	2.82293022820105
Merged-chr17-47743130-2	5.7757824523479	-1.01292517180493	0.844615049005603	-1.19927435936346	0.230421281738791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36989781761471	1.20194974038739
Merged-chr1-39911651-2	3.81933666214906	0	1.38178606179906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101159503-1	1.90277534103637	0	1.54069957145291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96811420-2	3.04423048617913	0	1.43701941685622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37482253-2	6.21388844667583	-1.3459702048219	0.781500706845949	-1.722289171374	0.0850171483235788	0.823080011865284	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99699765796785	1.47751579018518
Merged-chr5-65089798-2	2.03569288750499	0	1.42524088883999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75089352-2	3.49942417930306	0.251494277640773	0.960987686890352	0.261703954245845	0.79354969171257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	2.11005512232597
Merged-chr5-122627459-2	3.0433415792834	0	1.38482723218058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-77019709-1	3.30296589139939	0	1.38178821472481	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36757235-4	4.2194146167289	0	1.36837229053317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-20819886-1	1.98631378444092	0	1.44928342146168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9099866-1	2.58551054134054	0	1.49487077635845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90674046-1	3.82826691373718	2.97089570832561	1.24413215018359	2.38792616032565	0.0169437456799836	0.288728862513552	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.56807042924814
Merged-chr10-22164776-1	4.01570948831151	-3.37439400963259	1.13229930216944	-2.98012548728714	0.00288130323072919	0.0823474039533165	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92354090869492	0.465515277017237
Merged-chr11-31890161-2	5.07067072934357	-1.87558281666553	1.01829866460688	-1.841878892564	0.0654928667265597	0.704138991769988	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6924856131816	0.859510663435501
Merged-chr17-87064194-1	3.63296230306831	-1.0113722755339	1.05191623070796	-0.961457049534471	0.336322411283422	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.577068348605183
Merged-chr2-117387211-1	4.80219630760569	-0.834512924282553	0.860116157094795	-0.970232819601109	0.331930455065944	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09008352533139	1.64773888520721
Merged-chr1-156684643-1	8.82634645255738	-0.977517921371472	0.65770055976919	-1.48626591060606	0.137208799802901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18872623826516	3.08929839927585
Merged-chr16-59421049-3	3.60456888060088	0	1.39418421289088	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-117902474-4	7.36939191320751	0.411285129221784	0.71394091747126	0.576077262357414	0.564562959519857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.305479615197	3.06729383049679
Merged-chr15-64342649-3	3.60640024270657	0	1.379518465974	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37509460-2	6.61435093166735	0.83434830134002	1.18936028778033	0.701510139452476	0.482984709131978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	1.08976818821237
Merged-chr2-66180422-1	1.85156563085477	0	1.42878974519101	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130888073-1	2.34893668157632	0	1.41330705710594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76665939-1	2.38151154655165	0	1.46948123036139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83128926-2	3.60635865121082	0	1.4004989409059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77790877-1	1.16387077219535	0	1.63788019111314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79018824-1	1.6664999207607	0	1.58288605856609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155584319-1	2.03378402576874	0	1.39522362211896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54963074-1	2.69925496825797	0	1.42260117736165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41054906-1	4.49933014921027	-1.2311549491701	0.86471981022279	-1.42376170247898	0.154515465430844	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93819824813269	1.67575558916111
Merged-chr14-68067996-1	4.77313213262676	-0.584436036513255	0.940212742004627	-0.621599783116296	0.534205063668193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55237610040301	2.20145723341397
Merged-chr1-43916189-1	2.49487648704582	0	1.42110757194273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26439093-1	5.00432670812145	0.862212352256687	0.888705606386122	0.970188942278458	0.33195232147637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	2.37132011681132
Merged-chr11-53903919-1	1.41323218150015	0	1.79368107489314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85900682-1	3.06864490217819	0	1.39888993116423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159731654-1	1.50155957502593	0	2.42583769793352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134305227-1	3.17511087116347	0	1.3861613451947	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33922881-1	2.92467882874196	0	1.41186530421164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5166599-1	1.71911433723288	0	1.54559313382294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67494534-1	2.32528922750926	-1.35868368197172	1.45355062837054	-0.934734336357333	0.349925226892844	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr7-38084589-1	7.55486054726063	-0.241122800935443	0.622673099266404	-0.387238185204274	0.698579883357061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99846465094615	2.81320378388435
Merged-chr8-105454255-1	2.38585498386778	0	1.49025857566763	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83361397-1	1.67968491671909	0	1.59853416456687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58979219-1	2.04505534349295	0	1.41706401860817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146571463-1	2.45395463378945	1.28399565153053	1.41738737155425	0.905889016156925	0.364994598586475	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr3-84774455-1	1.31444347609225	0	1.67830439703751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102876946-1	4.248092486611	2.82169420070303	1.33648705387598	2.11127686760583	0.034748521147926	0.466393792859286	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.59013398928953
Merged-chr4-102623306-1	1.87003931498824	0	1.52865193387808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-47544373-1	4.39215908753824	1.02497450219402	1.56518325337569	0.654859103548045	0.51255847312348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9421480306394	3.12795275788049
Merged-chr5-66069217-2	3.71894560394938	0	1.4134419504378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65377314-1	2.68637733011817	0	1.40656838040988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21211053-1	1.66657990105594	0	1.41972797872686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-77211915-1	2.4790973662484	-1.03128100139125	1.22584433399337	-0.84128218632108	0.400189867723856	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83209945520084	1.6454950719498
Merged-chr1-153559436-2	2.64314841182369	0	1.40165983829407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45097257-1	4.00933180888964	0.289063646509561	0.821479316849762	0.351881831447775	0.724926885301358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80457862211608	3.6208897330178
Merged-chr6-5639808-1	2.32151707230979	0	1.47018604797262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-26476116-1	3.15067557135386	0	1.4172920938509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70080122-1	2.1328825329018	0	1.45252008599643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-8674219-1	1.55921830420055	0	1.69178174219084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-133625178-1	1.84882442956298	0	1.62675273950145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120947278-1	2.66943559960563	0	1.44327194982419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121602080-3	4.52341186215829	0	1.37942882522078	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142764504-1	2.22487324481693	0	1.46543250153179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61200277-1	1.92790255828642	0	1.49094528979063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111454299-1	2.50159613371352	0	1.38553908140817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39859438-1	2.34458280661523	0	1.50486401627414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-87035312-1	3.15158971322609	0.730320742430102	1.19043052826572	0.613492954934608	0.539550439658551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73383971880548	2.90398316812561
Merged-chr6-100662246-1	1.70372381772088	0	1.72236433747611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57445408-1	4.55176562083339	0.301351434818888	0.901843198576417	0.334150587701475	0.738265928260635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61453972724791	2.92222718070722
Merged-chr17-47763133-1	2.65889380250652	-0.860233975360472	1.28547634848113	-0.669194712432391	0.503371278757067	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63412505265868	1.18909650862134
Merged-chr12-57297114-1	1.90861786062785	0	1.43022770421421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86863594-1	1.95135169290126	0	1.42115865048121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53221444-1	2.2395770380894	0	1.46106708513879	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-49638043-1	2.93713209413314	-1.36199580703884	1.05766683704608	-1.2877361370644	0.197837829674569	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21849178465054	2.29256834160685
Merged-chr3-27646047-2	3.10040921941178	0	1.37917512725884	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77591043-2	3.32109982487652	0	1.38192963689306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4355519-2	5.75247705457024	0.289397635192385	0.861310316350182	0.335996945234225	0.736873170051891	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86737052669785	2.21524827894984
Merged-chr1-34178076-1	1.71350759380231	0	1.51712818034143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15285566-1	2.71961081073574	0.765994115471291	1.13421708807254	0.675350533444178	0.49945308534855	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.10718024078827
Merged-chr11-119339867-1	2.40594684246263	0	1.45176872976801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160231257-1	3.19216788495662	-0.454167188570805	1.11825794414146	-0.406138128461489	0.684641111787059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19779354260537	1.79230704629306
Merged-chr6-88027569-1	1.93235149543303	0	1.43450860465409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68197521-1	1.3294524268675	0	1.5051536585224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11564529-1	1.47263329775389	2.44264132606897	1.4650285435046	1.66729947815607	0.0954548703707331	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18984215491549
Merged-chr10-75228622-1	1.71550685522724	0	1.47694665607649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62052642-1	2.18897159197988	0	1.49836668290842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58689385-1	3.39093235865042	0	1.42400245645316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57622969-2	2.68684759178066	0	1.41422468618265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41326361-1	1.86668777453768	0	1.48790059840464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-64880818-2	2.61669358282658	0	1.42349814484132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57806032-1	3.72902836750951	-2.0440000755398	0.96682367191091	-2.11413945988711	0.034503357773503	0.464134626382046	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17833142907538	1.0754104773304
Merged-chr4-116704023-4	4.01702730743819	0	1.37780992726467	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125081997-3	4.21236341861716	0	1.37927564973291	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28553260-3	3.52645655199974	0	1.3802050328408	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-88805038-2	3.36973684601578	0	1.39095387458243	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22784682-2	3.30694022581357	0	1.42235063617667	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93798009-3	3.21855740634936	0	1.44204078959581	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73427530-1	3.45441307721314	0	1.37672302339313	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99544469-3	2.64495198278308	0	1.4875401327319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43282917-2	3.09773406844058	0	1.40553871372728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129382748-1	3.19788571250312	-1.38360293409397	1.18164502897	-1.17091249924692	0.241633950434263	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12390030088957	1.67735121185591
Merged-chr4-102785335-1	1.67926807579204	0	1.55211346659205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113224355-1	4.87880042687636	-1.77357586470766	0.784421317019747	-2.26099906545886	0.0237593149326863	0.362790056299409	C57BL6J_F1_Control-BALBCJ_F1_Control	3.38549323695688	1.86575916392988
Merged-chr3-79299604-1	2.95729554891212	-0.775119213663913	1.17202647577692	-0.661349576723598	0.508388154557918	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.577068348605183
Merged-chr8-90965203-2	5.74373150669254	-1.12196302724848	0.972781947357065	-1.15335510727427	0.248764659785401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99186294665078	1.07599819202159
Merged-chr11-115010388-2	3.21425013851739	0	1.42277587285418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-62952838-1	3.64312906866295	-2.22321550312489	1.09485491900034	-2.0306028356294	0.0422952998504796	0.526598764217184	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38580964398671	0.879366456215217
Merged-chr4-59867642-2	6.03159637303695	-0.862828460720859	0.744320103798057	-1.15921692336145	0.246367774915732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80193137221517	1.97731223551783
Merged-chr10-96625820-1	2.28764338568457	0	1.57527299744072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75096998-2	3.20306824520479	0	1.43244361118428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66163804-2	8.93219317165457	-0.529776861431794	0.783689176706526	-0.67600379994808	0.499038232452819	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57728790141107	2.22937638953367
Merged-chr6-87452184-1	1.61177167066638	0	1.47297684673312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-12010732-1	3.22239403185214	0	1.46536136716242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66117037-3	5.96069819282844	-0.127563651506664	1.07071596480493	-0.119138647129357	0.90516551279413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.662147012823607
Merged-chr11-76457075-2	3.62641096771924	0	1.42790618043831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33396676-2	3.07933335462369	0	1.39361406765663	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115901844-1	3.00994638664812	0	1.42108356989642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52024677-1	1.86195596120093	0	1.52570573943342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118673015-1	5.60031448727187	0.404915861842317	0.619992343686305	0.653098164785065	0.513692995332788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61796449232538	4.07685277432935
Merged-chr3-32333602-2	2.93412968859178	0	1.41227334303912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3844554-1	2.12609452281263	0	1.40665138833874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136200049-3	8.81931101031889	0.530563557950725	0.504049097832156	1.05260293140609	0.292523013109034	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47322877959968	4.1100895182807
Merged-chr4-140971839-3	3.56197306258479	0	1.38084889371638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43303991-1	2.29287006074013	0	1.42665049745175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40507954-1	2.23079494634945	-0.677391259406125	1.53117646722063	-0.442399209958939	0.658200350622047	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr19-46424877-1	3.26686979053156	0	1.46158375150283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128668157-1	1.85804615556916	0	1.53668018858601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138132361-1	3.85082705428369	-2.25512961261557	1.12207011210121	-2.00979385182319	0.0444530117842715	0.545467554758739	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98355470317615	1.02748994520012
Merged-chr10-122782614-1	2.34737414723479	3.30559424547831	1.46421064015388	2.25759474410794	0.0239709366368772	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.88744669294464
Merged-chr12-12412863-1	2.46278956834405	0	1.41584327782048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155201534-1	8.81770505306329	-1.61965445049269	0.943296822791097	-1.71701463564813	0.0859764978919896	0.82755744795709	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	0.724326877898254
Merged-chr8-35424058-1	3.09866502126267	0.354652971509461	1.13239589181971	0.313188147423909	0.754137722784501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.02748994520012
Merged-chr8-14676587-1	1.5030697754682	0	1.61765901104323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72641192-1	1.83961347786361	0	1.45324916379575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157876885-1	2.06905996153077	0	1.44235349688168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34438545-1	3.75070016016354	-0.709398187228269	1.11638555145682	-0.635441928017201	0.525140229945543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30081306793583	1.25163494309627
Merged-chr11-36878274-1	2.09520331353306	0	1.43807226048919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110978887-2	3.2503028188043	0	1.403586696031	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55593224-1	5.68466028369281	0.0767943670566878	0.812335454440875	0.0945352891307015	0.92468395128341	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7179682886312	2.52093504802274
Merged-chrX-109139446-1	2.60204983784646	0	1.46166091381702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12680802-2	2.14202273860597	0	1.49092322263319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-53021894-1	1.32193857427553	0	1.79619913902765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58364206-1	1.93048790895656	0	1.4886290453278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170451108-1	2.12458427917239	0	1.41711205401157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60191970-1	2.05164036047266	0	1.51757319687615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8950669-1	1.27475794632211	0	1.53913428219741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33306756-2	2.46636917221117	0	1.42376725206667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37604757-1	1.03359246473025	0	2.00398415477362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151490941-1	1.29257881702118	0	1.65074004827346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97769942-1	0.783579689380257	0	1.84783628480377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36784883-1	2.79422165230889	0	1.43318461569428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49869994-1	2.74908181957395	0	1.44877278526425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7203979-1	3.70915896724473	2.21139028525473	1.27839407234851	1.72981894478925	0.0836626285676388	0.816245624215499	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.815004392037195
Merged-chr10-8995970-1	2.30877112440921	1.1793861341429	1.46045220717189	0.807548599229229	0.419350486720345	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr4-149769930-2	8.14300163979992	0.237696690206069	0.900074093214048	0.264085692498142	0.791713888392233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21344483336542	4.0050973055413
Merged-chr17-10314230-1	2.8009041956156	0	1.4279430855657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171687643-1	6.24489571531587	-0.431433699081564	0.777311121173687	-0.555033483156819	0.578871758326992	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49220702424193	2.45516733835474
Merged-chr10-80940514-2	5.03733870405707	0	1.38096118685692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38225022-1	2.19343954404608	0	1.50039123251614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36538512-1	4.11530144867029	3.23909379677249	1.17168897663679	2.76446553766339	0.0057016129522751	0.135816817910921	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	3.37820135653025
Merged-chr11-82915157-1	1.97234454965356	0	1.52011646533792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118439440-1	1.26715076802028	0	1.89097297772701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128447454-1	2.39453993291689	0	1.40140633604257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119429332-1	5.43094905693772	0.404813413218226	0.714012347119538	0.566955760430923	0.570744238637466	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53837419804873	3.25785106380043
Merged-chr6-47782110-1	3.32017219241466	0.842440611595218	1.22162006469454	0.689609344134228	0.49043988959812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.844015785373878	1.02748994520012
Merged-chr3-96487865-1	2.48084668707388	0	1.4303015137654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-85246645-1	5.86245079139431	0.0736906028443714	0.71760017456893	0.102690335727187	0.91820874406578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82286752253771	2.1891878115649
Merged-chr19-57643112-1	1.44283325326721	0	1.48464539874928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-56451573-1	2.13619144101681	0	1.63580365182443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36541576-1	2.57090785408	0	1.44412367658575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150824255-1	1.32893940629037	0	1.51753941116694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138165854-1	1.86804487591849	1.33495007223904	1.27639776086255	1.04587309157995	0.295619629345719	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76550025052025	1.99791872015245
Merged-chr5-65429456-1	2.2142712616183	0	1.54721081271757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178360910-1	2.11610433315507	0	1.45033356357492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127827502-1	3.00470732889999	0	1.39721839334841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133878085-1	2.87758803391709	0	1.41435997602097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58498260-1	1.87337755381835	1.76411224927657	2.28465522116465	0.772156880799405	0.440021516468716	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	2.11005512232597
Merged-chr1-152529554-1	4.27594890113677	0	1.40623089333135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4717583-1	2.71021195207851	0	1.40417447680937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43401359-1	3.75802202776953	2.32549897535343	0.977194536380111	2.37977075063061	0.0173234115769214	0.292490605302428	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	3.90978655969124
Merged-chr8-83782427-1	3.84797358885418	1.68172062169454	1.32372865448947	1.27044210759579	0.203927192237572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81050397723341	2.87832861415563
Merged-chr14-64747353-1	1.94010200519909	0	1.56732514825228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172356737-1	1.91541252402385	-0.0539462627587765	1.11609038484944	-0.0483350304698252	0.961449236891434	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30945684676081	1.90433273254342
Merged-chr11-54927979-1	2.17617720486025	0	1.44741054421539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94806509-1	1.54105205209464	0	1.57240757578337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31082509-2	2.89391659562897	0	1.4196780476777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99136331-2	4.63128720395897	-4.97559481331611	1.07004131882216	-4.64990905098222	3.32081436498809e-06	0.00035534674816218	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71980362253162	0
Merged-chr1-52166875-1	2.98763647876455	0	1.43593473613391	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104319623-2	2.54949034769575	0	1.44854067662774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97753628-2	5.00691178174285	-0.00755999229337685	0.745964533951372	-0.0101345197382664	0.991913961587389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71571771627948	2.92582630772295
Merged-chr19-40375865-2	5.09087355531805	-0.431434245274629	1.05588147901315	-0.408601016165049	0.682832484817469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	0.97908007631626
Merged-chr19-14636883-1	2.68714572605306	0	1.44113964134633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146574034-1	3.33023998489788	-4.14045438163809	1.27424647469774	-3.24933555937067	0.00115674936192313	0.0402044364224932	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41421900036213	0
Merged-chr10-96364030-3	3.86432451037093	0	1.3869769479638	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54986592-1	2.72079646922418	0	1.41916928932546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63129975-1	1.87187452906767	0	1.42820384836298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24965829-2	4.11391273497927	0	1.38618195353399	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145034248-1	3.49278176259592	-0.982320610629968	1.08161161957161	-0.908200866979435	0.36377210613161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.577068348605183
Merged-chr9-47739706-1	2.58536530110339	0.152053494963744	1.19690286843352	0.12703912654395	0.8989094309102	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	1.18984215491549
Merged-chr7-46882157-2	2.52571209841185	0	1.40390650895856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32888678-1	1.38593495687189	0	1.67013895846004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106988159-3	3.55313057824266	0	1.40334094985725	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-76513418-2	3.37738844156863	0	1.41977892994169	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75899688-2	2.48544476973039	0	1.44465916898186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35607924-2	3.84312787635896	2.15864304937882	1.27498161793829	1.69307778167771	0.0904406628113101	0.854408062175878	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.08976818821237
Merged-chr12-26315096-2	4.50742864490042	-1.60145317339409	1.24060500614023	-1.29086467124338	0.196750607768401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.82780788634396	0.413263464506793
Merged-chr19-44404131-1	1.95243803757144	0	1.48290078684251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117478124-2	3.03999462643085	0	1.40989038053996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84182922-2	3.22417996242902	0	1.41444836607046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74788781-2	3.13763108503621	0	1.40645689614353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68859809-1	2.82699572476682	-0.984103695434139	1.13534378850999	-0.866789165883989	0.38605753934222	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69486619385668	0.788686275880602
Merged-chr4-97764802-2	2.71145303482441	0	1.4297198080413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54535141-2	2.35266893595516	0	1.49835894992281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43568462-4	8.93020138237901	-0.0183623847335399	0.538408983539973	-0.0341049003543914	0.972793500842134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75303030028359	3.66981378487606
Merged-chr1-54933807-2	3.51278490443907	0	1.39887069133867	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91905406-2	4.52289631852995	0	1.37376393068028	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53470092-3	3.38620856873036	0	1.40382446577567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38735680-3	8.06583150254621	-0.13184942759545	0.646124964483804	-0.204061806682838	0.838305200152616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06496405637937	2.91149846128121
Merged-chr11-105474559-1	3.09198601754085	0	1.39101845006083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-73116936-1	2.02927575530012	0	1.59990432633463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54637223-4	4.25935842890337	0	1.38303612835661	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69574692-3	4.88394878601408	0	1.35999457279657	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99219234-1	1.76574003128358	0	1.62294781752572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166035847-1	4.90594385344418	0.270437649180244	0.881865572646945	0.306665389338782	0.759098076489449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	2.16210496555786
Merged-chr15-27665462-1	5.71228476389084	0	1.35952793038333	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22007986-1	1.98564461402245	0	1.49216322190673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118923053-1	3.26900842187651	0	1.41150045475316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18935314-1	1.20487125255401	-1.97103240466426	1.8050834580199	-1.09193422382054	0.274862013572406	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	0
Merged-chr11-77317951-1	2.0885125396217	0	1.44118809675191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7851089-1	1.20924430997277	0	1.55140778546405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70636892-1	2.6531415001184	1.59666726006486	0.999422444403779	1.59758995708504	0.11013426296937	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89255009218154	3.21232861418304
Merged-chr11-26129232-1	6.52573146973614	1.10708986583918	0.866737640991603	1.27730678059925	0.201493960696607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	2.22220991807165
Merged-chr7-132308517-1	1.96622310052868	0	1.47602194080902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134946173-1	2.58196167202553	0	1.41488814080969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30686771-1	1.19179977423495	0	1.61563750230567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36937247-1	1.92725232423079	0	1.51506387827027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26388983-1	2.96225180837603	0.680106217995929	1.23339299326887	0.551410800699816	0.581352098358792	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	2.09731566194742
Merged-chr1-93654171-1	1.94556796897125	0	1.49117708050994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70608940-1	2.09271265489962	0	1.45671906335034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69364698-1	1.93889172211123	0.314384449042748	1.39073795324076	0.226055849205923	0.821157982979131	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.577068348605183
Merged-chr9-21309330-1	2.46831895470253	0	1.46617290220134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125815830-1	1.17380603960924	0	1.58589331568766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-53007384-1	2.93260226941271	0	1.42035330532701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19990073-1	1.79614004667438	0	1.52005616186487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25606184-2	2.73887297110783	0	1.45421693177556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29499270-1	2.35840209119613	0	1.46673527655109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34208744-1	4.7836481326953	0.216844638431267	0.783610667563326	0.276724969946563	0.781991297074807	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82817855237796	3.24397182408067
Merged-chr10-59316632-1	2.74197873038301	0	1.41921922755416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45702639-1	1.54377416784836	0	1.54936807307058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9341706-1	1.53328917378265	0	1.46779525433318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78013267-2	2.50607191632565	0	1.39195525808442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135714967-1	2.40077541697926	0	1.45525137498395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33902628-1	4.46781108013395	0.511297574518915	1.13943920120988	0.448727386222986	0.653628326287508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.36657423908294
Merged-chr11-30656279-1	3.50615938878477	-0.0686914426619901	0.92030978535229	-0.074639478744318	0.940501562218603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08706762733164	1.60650301571838
Merged-chr1-177568613-1	2.32458131850665	0	1.50126832224532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90265493-1	1.96611086288041	0	1.51572043106598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59444204-1	2.7739095990982	0	1.3970784241578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68654193-1	1.54902271242418	0	1.42956347452375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102024991-1	3.51882804648959	-1.72334463831774	1.19927207900884	-1.43699221259451	0.150720206299827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	0.601513806634888
Merged-chr16-43948024-1	1.20609098444135	-2.37652828740797	1.58157637810037	-1.50263263938124	0.132933801795543	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0
Merged-chr16-11708988-1	1.79330725442024	0	1.42808168101565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51981664-1	2.43631966489915	0	1.42795694911464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34345789-1	3.12732846761392	0.628971949394915	1.26215458990496	0.498331943191107	0.618250096769789	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.66382599071749
Merged-chr14-61737698-1	3.52856160199946	1.17115303701699	1.07925468920698	1.08514982490142	0.277855302720446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.49092140105159
Merged-chr12-25414966-1	4.91047394343586	2.19506736968942	1.06559538324466	2.05994451947192	0.0394038450131661	0.501745985259006	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	2.1304360554358
Merged-chr5-77237369-1	2.18085377709716	0	1.46052531511122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-162941464-1	1.68407140565733	0	1.43244689245061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129590941-1	1.9977431491894	0	1.5015908030849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24531207-1	2.75217665408499	0	1.40939094562108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-16714677-2	3.10350337107462	0	1.40043939287211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59786862-3	3.70678186763271	0	1.39622345244726	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105930811-2	2.86200000331857	0	1.40720916935644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44094304-3	3.85437118460691	0	1.40025419331074	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153081359-4	7.09130789077942	0.471829536345342	0.777267591525523	0.607036162950387	0.543826913233231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20722616279249	2.65282270727366
Merged-chr1-43457121-1	2.42790399431477	0	1.40111732293393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60219159-2	3.59722417686938	0	1.4069762117723	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-124073761-2	2.70831051475715	0	1.41541968911484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36776256-1	1.56984297101525	0	1.49495683354448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115986433-2	4.15639303841784	-1.74579357725948	1.33910091539926	-1.3037057604721	0.192333924602428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr9-40768258-1	3.98635834473276	0.337124496439184	0.9700077028574	0.347548267344785	0.728179463502754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94036587464633	2.43104886968133
Merged-chr6-30162204-2	4.36742975165514	0.872700335763366	0.987221345323911	0.883996623347958	0.376698035623408	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45795114796949	2.38650562580925
Merged-chr10-79712610-1	2.38885062507232	0	1.42986093190498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44501884-2	3.39314055118738	0	1.40115977792449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59529736-2	2.78517674709019	0	1.46722592227518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-3943645-2	2.2647824623947	0	1.46494614388488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12590806-1	1.29131543892502	0	1.54731048611356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74379731-2	3.43410473018321	0	1.40436527662611	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107357721-2	7.39767740252448	-0.296150977117368	0.621421743226117	-0.4765700272731	0.633668330813501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62711499251999	3.82306547818648
Merged-chr3-122918736-1	2.3381832714059	0	1.41362155942859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77783411-4	8.52078059978157	1.21561454066057	0.618441139380261	1.96561073197481	0.049343593466048	0.584626939237337	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96334085054552	3.57559700389474
Merged-chr10-127671644-1	3.47864590656648	0	1.38281198322754	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-36861866-1	2.88766112610342	0	1.43397484705485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174222255-3	5.37504836168515	2.53382614689443	1.06588931166497	2.37719444145329	0.0174448895928763	0.293769130538774	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	2.10921814850263
Merged-chr5-99619232-3	2.67122389279937	0	1.47760658479356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108072860-2	3.39899955443661	0	1.55850811784213	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100664001-2	3.29323405834274	0	1.39700143978732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154855612-2	7.6452838825015	0.207222272451049	0.905706810235331	0.228796195533968	0.819027323892231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88205150313425	2.15193122244385
Merged-chr7-19744798-3	4.70538951512535	0	1.40292475273385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67760719-3	6.45772123076489	-0.235720619316775	0.691279744674628	-0.340991647929341	0.733109869335513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	1.60401468765691
Merged-chr1-153493526-3	3.57176328179336	0	1.42597352666544	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105260461-1	2.74469981160682	-1.332271470302	1.02782820692117	-1.29620053364051	0.194906405756871	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11066895928297	1.39293125551424
Merged-chr4-32411443-1	0.83633473421607	0	1.66465379344698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34859720-2	3.08997381940949	0	1.39270978559755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79729384-2	3.14221730531787	0	1.37051145075042	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9116782-1	1.22121571488759	0	1.60234547492901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92731101-1	1.73127460122602	0	1.59209142131911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57904479-1	2.53893943577204	0	1.40175662423932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-9450102-2	3.57126798260405	0	1.40755352143369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-17834922-1	1.14118084658498	0	1.4916676380693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96883150-1	1.61929905658377	0	1.52801110278259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96532102-2	1.79754346611559	0	1.58803377842862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156498094-1	3.75027575872721	-0.605683616097848	0.969237661673392	-0.624907223530845	0.532031951094699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53857528724196	0.948471875794396
Merged-chr2-122151307-1	2.05828613809469	0	1.43363494243023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156435020-1	3.08451305940661	-1.73738808559124	1.08529725406502	-1.60084076420888	0.109412192282339	0.962852090055961	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81794367562341	1.7092907815249
Merged-chrX-162715826-1	1.23589498497988	0	1.61706267134663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116124046-1	2.03738885624121	0	1.44592024218514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121234054-1	1.98278742510388	0	1.40858635153383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75343375-1	1.59292909361259	0	1.4666846012948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74564537-1	2.20906407241367	0	1.55359365019509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116751396-1	5.57870564836529	0.10578597205891	0.789919109029419	0.133920006301519	0.893465830048201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70317705787455	2.77117693040169
Merged-chr2-58485198-2	2.45481733741689	0	1.45457262226944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31462437-2	2.61137457221311	0	1.54169830657768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162530367-1	2.36445709967463	0.120807235707131	1.26924087602129	0.0951807005190595	0.924171299138305	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.882176137820124
Merged-chr18-65921942-1	2.43639809084006	0	1.52041890707982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-105417865-1	1.21500490191368	0	1.52401842943209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-170004341-1	1.87288424771368	0	1.46877924946915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65150914-1	2.6077669315007	0	1.40156795291288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69004280-1	4.84934415852268	-1.05843445777037	0.836376889995328	-1.26549940634572	0.205692361065876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24352954024134	1.65307960418419
Merged-chr5-141058159-1	1.69701465321439	0	1.43933169264282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95871374-1	2.20381825537025	0	1.45734412542985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34946878-1	2.6006443726156	0	1.46702463958782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61714786-2	3.67725054062018	0	1.37848537019206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180407258-1	2.87374809600796	0	1.3879146427451	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97543395-1	2.2212380158483	0	1.43459422336988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85037858-1	2.96360339275134	0	1.40252801357759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102675543-1	4.04684674855268	1.45044442047946	0.918723973718163	1.57875973847659	0.114391176676701	0.987669235399691	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	2.85006779158513
Merged-chr13-24862766-1	2.47774290818691	0	1.40898349624261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25785369-1	2.04745386863215	0	1.49523696206021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34718703-1	3.02023446665693	-3.76903640584643	1.22457810721643	-3.07782442266077	0.0020851773100424	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26292282237182	0
Merged-chr8-71284430-1	4.73355805744055	-3.12721639123686	1.18326768657149	-2.64286469302474	0.00822078801104366	0.176142615487711	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48291181664133	0.465515277017237
Merged-chr2-119050422-1	4.34961336159706	0.00884167578193845	0.882903520736611	0.0100143170508164	0.992009864588906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93847405924208	1.5254723561935
Merged-chr11-8792429-2	5.55561408314824	-0.493863882620836	0.762372947922963	-0.647798277688547	0.517115429510199	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89285035065765	1.72711687624513
Merged-chr5-7114810-1	3.53218983425097	-0.0847435548478428	1.03805875129067	-0.0816365689730732	0.934935720500136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61958354526469	2.25478449151872
Merged-chr14-40923566-1	1.06966988633868	0	1.74314057676092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69109259-2	6.58559211112932	-0.11488377511549	0.721543054755732	-0.159219570278287	0.87349588569092	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72800862926832	1.78982978868021
Merged-chr15-31632720-1	1.53779609297212	0	1.54160961663743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-15212883-1	2.66662537071188	0	1.41004529774269	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152601570-1	1.56593787440972	0	1.52324743652325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54998533-1	2.50041842314987	0	1.39358622963589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79126802-1	3.14370294364675	-0.100015293263191	0.997000218967704	-0.10031621995705	0.920093280784385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	1.58309189503961
Merged-chr4-33263776-1	1.68057277028532	0.365788053890984	1.48679889786853	0.246023893625006	0.805663736410952	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.40024388691264
Merged-chr16-63275011-1	1.35027321233102	-3.55531505743095	1.46565019563222	-2.42575961714885	0.0152763850328167	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56868975155888	0.303163067301871
Merged-chr4-116678037-2	1.72862250678164	0	1.91702193787348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155863178-1	3.27607038841698	2.97232881585116	1.24901381585399	2.37974054259671	0.0173248316354541	0.292490605302428	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.16285061185201
Merged-chr2-128371028-1	4.08744186239889	1.08507858526647	1.00876043657377	1.07565537458221	0.282081412254029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.74544410475497
Merged-chr8-88300060-1	7.38840786494402	-1.83334430285347	0.735989891538769	-2.49099114530012	0.0127387294508043	0.238616331570045	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90034600395319	1.56203317187393
Merged-chr4-123575857-1	3.91946221623437	0	1.3816038425893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-49969049-1	4.62676516050022	-1.26183941956926	0.940714628178859	-1.34136260006083	0.179802754192298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64850223368472	1.39020008251549
Merged-chr4-139512586-1	2.20818623125456	0.486415678142187	1.74790405984768	0.278285112619154	0.780793503347911	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.723581231604105
Merged-chr10-7883666-1	2.62002406723037	0	1.42365485574553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88791747-2	3.74732919704726	0	1.39717590002984	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75019115-1	2.50717764914268	0	1.5184539870519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-151930599-1	1.96715259962534	0	1.44231659380013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107680843-1	2.12075996472007	-0.0369114218689197	1.24389983036244	-0.0296739504001417	0.976327087339571	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr2-59181999-1	2.05890831072914	0	1.51411175895265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94060112-1	1.43088198835228	0	1.76675419164471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93013863-1	3.40758981692027	-0.992683974070298	1.09709287608822	-0.904831300709745	0.36555476659471	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52577376032626	2.33461518298448
Merged-chr16-45648008-1	1.01341532100837	0	2.00115360573942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-22398254-1	2.36809069650885	0	1.40503768501624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74549575-1	1.39143927667525	0	1.78122909808187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115070455-1	2.99314406038762	0	1.42324882492905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114649773-2	5.26172404393064	-1.78601897937143	1.07980216320928	-1.65402426502203	0.0981225825704159	0.900379045568068	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74217319315236	2.03824006400677
Merged-chr16-11676850-1	1.40028699179947	0	1.65339773120156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99119943-1	1.99681102455468	0	1.48194844020878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80823973-2	2.81321292230155	0	1.38783099533396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30718022-1	1.86518859634368	0	1.63413007158206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57767314-1	2.1904019639798	0	1.49690998801142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-34112693-1	1.19037796603188	0	1.63472515778563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44053919-2	8.44560605282791	-0.170521957274548	0.51238665374368	-0.332799373341702	0.739285731302359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24942587084132	3.76488560597083
Merged-chr16-94207428-2	2.96133680066866	0	1.38414953295493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150783008-2	4.21169791125397	0	1.38333707612452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95009492-1	2.86338726906368	0	1.4229608403734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87759271-2	2.63846813081302	0	1.427142262142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34132129-2	5.65762965330367	0	1.35495135502218	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40478165-2	2.88272589542469	0	1.40671910241672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60691803-1	1.63492551073663	0	1.47751775839088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134749454-3	3.63262896159845	0	1.39146786938808	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57104103-2	4.36032389638087	3.53254667423531	1.22339504472132	2.88749467269585	0.00388323181803119	0.102970047998223	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.08695703474815
Merged-chr6-31215222-1	2.01721112990001	0	1.44812184352175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59017652-1	1.26057072885401	0	1.49030148811425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33565145-2	10.324246734883	0.205650181943733	0.733224903710926	0.280473536704655	0.779114225667219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14917097899369	3.73721769498232
Merged-chr11-29655349-1	2.60509121532129	0	1.46511741724203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141503283-2	6.88100022476841	0.510124260262381	0.707384766572929	0.721141144633045	0.470822678643412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83995505205827	2.76609946451793
Merged-chr5-5610532-1	1.39085269067387	0	1.50036679923943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20898850-1	1.20953748995292	0	1.51962004489495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44146898-1	2.08345317248992	0	1.51417911975115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63782853-2	2.70106815939557	0	1.42462229277358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124445707-2	3.12840648231396	0	1.3747813606325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148607979-4	6.9130871655879	-1.5159312864746	0.840099403413944	-1.80446656706844	0.0711581957514851	0.73922260138682	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33144057216469	1.28728541095094
Merged-chr6-142988958-2	3.48270656178114	0	1.39262054245345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80554952-1	2.20837919009254	0	1.42634731607735	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149632889-3	4.56190600132834	2.45339606258395	1.22091420308231	2.00947458583914	0.0444868272537497	0.545759296476321	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18984215491549
Merged-chr11-113444458-1	2.52134153945515	-0.0308465828597621	1.68142624592462	-0.0183454867167245	0.985363240409947	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr5-117377963-1	1.98021496708375	0	1.4670242841379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110371994-2	2.51658589085634	0	1.42289387364432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-104434490-2	2.54123046266714	0	1.43632825325478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150755252-2	2.84904550537767	0	1.40862758759853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53931486-2	3.77299651999774	-0.382237630376539	1.15572432786211	-0.330734260032072	0.740845221505961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	0.67591700901439
Merged-chr8-78940245-1	1.74548218137004	0	1.59878625653252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107044495-1	3.12091906545184	0	1.45031036695511	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44771202-1	1.57304438095302	0	1.73171805389981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99209092-1	3.08154482190316	0.961642810814058	1.04440683246126	0.920754997885108	0.357178355048563	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	2.47171448067546
Merged-chr5-17815499-1	2.02017755328908	0	1.51215613240519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106762681-1	1.34114644474835	0	1.54711416356441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67868851-1	7.83025888822736	0.0415529455090924	0.670796013146341	0.061945725220086	0.95060605393232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94620305121175	4.01801675452577
Merged-chr14-67920114-1	1.86110668795664	0	1.41809539104997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97309068-1	1.25047956066251	0	1.7298008045078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49796498-1	2.05417311343274	0	1.45394098627861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28871962-1	2.78734481828769	0	1.43443300800447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69329537-2	4.49215360067318	-0.257287254429258	1.02900884572555	-0.250034055098764	0.802561012704454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84016081186083	1.33245162145219
Merged-chr7-30436624-1	1.82265892176322	-1.29878305322199	2.10767155838594	-0.616217004046211	0.537751307257113	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52291781457558	0.921168194051549
Merged-chr7-73552209-1	1.94513924829214	0	1.48841307839681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-32591987-1	2.63918758183489	-0.488771670514457	1.37662721055823	-0.355050130322689	0.722552035977552	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62731258735184	1.99363527715616
Merged-chr15-38666645-1	1.98811228042856	0	1.47721943087054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59818023-1	1.89512537633889	0	1.50163222882264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78088114-1	1.68284882233263	0	1.57324757965266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149917266-1	1.70427085682145	0	1.60878534717684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111096615-1	2.41715211763164	0	1.42941613481893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-26065265-1	1.55719171346596	0	1.53072025063136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148525536-1	3.15363118488809	-1.16715996030809	1.24942666558357	-0.9341564354743	0.35022320407907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.55634759613363
Merged-chr4-86579679-1	1.13527559522968	0	1.74525057045095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-34571346-1	2.79503620116418	0	1.59407080977946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126481780-1	2.05603956215221	0	1.47104331191744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33957007-1	2.06987352779302	0	1.4092661133575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37605077-1	2.39697194880728	0	1.41815757873102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116569374-1	2.29549313830989	1.2519605484485	1.14543579131349	1.09299932649464	0.274394095458559	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94036587464633	3.40843008616114
Merged-chr13-60758781-1	3.72395293638672	-0.481449520143662	0.948917895556162	-0.50736688853516	0.611897413960817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70898055566492	2.8239157937873
Merged-chr1-155093640-1	4.09446968122356	0	1.44341448093705	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20584345-1	2.07308317113469	2.92240539848873	1.67089115158637	1.7490100391723	0.0802892840860858	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.75107117680423
Merged-chr13-37853684-1	2.26066192461651	0	1.38949291397795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137202299-1	2.35020075365553	-4.33261475545416	1.42783032473447	-3.03440449498781	0.00241011050475527	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07029884533764	0.376242425970964
Merged-chr10-20925440-1	2.34253320291962	0.920840798293493	1.34658249126368	0.683835416149918	0.494079099901173	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.948471875794396
Merged-chr9-87098214-3	5.92640064232952	-0.134585233864956	1.16063536064144	-0.11595824014062	0.907685638001878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.577068348605183
Merged-chr15-38440816-1	1.36113564342972	0	1.7425924430544	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-27179599-2	2.02591634101331	0	1.51956689412037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66232822-1	1.36309401976728	0	1.61038543724642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123211071-1	1.65812563356529	0	1.4335446119591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-153424790-1	1.69975602518377	0	1.51579730025682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114568687-2	4.47846450238438	0	1.36751081011345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53578466-1	2.15106261236093	0	1.44439160618418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73687689-1	2.05484819763211	0	1.41145272461825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101685104-1	2.37774011117865	0	1.46770983196358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71042879-1	4.29405300193335	-0.504195110606069	0.797584245590648	-0.632152795636891	0.527287039142923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72908043220718	2.39057570002462
Merged-chr10-88672947-1	3.61975894099404	0.568600895806602	1.24153781452314	0.45798113368379	0.64696599563896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.23021119707292	1.4994506617149
Merged-chr1-162623447-1	1.31509877635332	0	1.95537443621003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119500533-1	4.795407246019	-0.564782644160939	1.07328022054199	-0.526221049592933	0.598734630355918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89255009218154	1.59184561974686
Merged-chr10-8842421-1	6.29552282568148	1.2040192912403	1.18379259030427	1.01708635541538	0.309112350629246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.40373237117109
Merged-chr17-71103082-1	4.29033977249279	0.622045924195184	1.10800679352206	0.56140984679152	0.574518172910872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.38572824442771
Merged-chr11-70598731-1	1.84362114022969	0	1.50050624438138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149471427-1	1.09403431770631	0	1.76405636173355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-59604196-1	1.72714778141531	0	1.45737159955939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20804149-1	3.39394714918759	1.31404588532326	1.03606549309207	1.26830388048305	0.20468945183559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	2.39057570002462
Merged-chr15-49506878-1	2.76379156329698	-2.22421651446797	1.23586651744445	-1.79972228640617	0.0719045002517369	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09780255584617	1.23107802440432
Merged-chr13-81262526-1	1.93292696872139	0	1.43769668064688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45435210-1	2.43602691680805	0.619850483491391	1.34052087537469	0.46239524865149	0.643797905978603	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.724326877898254
Merged-chr15-41595194-1	1.66777168912541	0	1.55528272276789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5768478-2	6.60750904294412	-0.473275257618165	0.726229459699138	-0.651688321504106	0.514602257946907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16424953000632	3.09201852019969
Merged-chr7-130009250-1	2.08962920187023	0	1.46727390128964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88476609-2	3.36729465683613	0	1.37731216643485	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70944790-1	5.00661085219826	-0.788286676408788	0.692691480816514	-1.13800544432796	0.255118208977554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15813062208874	1.60575736942423
Merged-chr1-59487696-1	1.67373928776714	0	1.53897989949127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127768881-1	4.32613522386086	-1.72370239736269	0.946611372717181	-1.82091874980851	0.0686192085861967	0.723923170109872	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72065437544902	1.06702908365212
Merged-chr16-22537366-1	1.54798539693093	0	1.59061420330659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45216429-1	4.78941721471485	1.34503503842342	0.88797874740342	1.51471534916404	0.129844505631371	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.4657467976946
Merged-chr11-11559475-1	3.82558674415717	1.29602083941634	1.04276059716074	1.24287477197085	0.213913983527426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	1.96414396348479
Merged-chr16-91735533-1	1.76152535078364	0	1.60374373971838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52599837-1	2.40842923390928	0	1.50793606562541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51816039-2	2.79154704778484	0	1.38804697124078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50118294-1	2.46656060487877	2.69516660739582	1.25776434584914	2.14282318964628	0.0321272985021348	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30139522650344
Merged-chr7-81167308-6	11.3483040147909	0.877354352955405	0.465309778881359	1.88552743306757	0.0593586642846241	0.661841029680644	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35710291894241	4.36700193891815
Merged-chr11-100362659-3	4.80151622654064	0.240987187109418	1.05699790081716	0.227992115143382	0.819652370318617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.18984215491549
Merged-chr13-95489126-3	6.1447351396448	4.77758829736339	1.08372384163016	4.40849237955018	1.04092682301814e-05	0.000914115366275328	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.96810952347106
Merged-chr6-88113235-2	7.28190919782294	-1.0466241943932	0.708539258593061	-1.47715766162551	0.139633379904501	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99932271347806	2.86523152519899
Merged-chr3-88150792-1	5.96461850608039	0	1.37233524516693	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10923693-1	1.96121651657048	0	1.46701280619182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129270211-1	2.36160523097095	0	1.41609683048398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32853832-1	4.68560270174759	-0.175800965004481	0.79823570473216	-0.220236909928088	0.825686652280483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99104673515555	2.44016484010169
Merged-chr2-46444096-3	3.48814174605969	0	1.42241728656584	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130803036-4	4.89338832667053	0	1.37811616974337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36240073-2	3.37656034453562	0	1.37384680908418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87863437-2	2.38717044556344	0	1.45817758212704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-93598697-2	7.63848222069128	-1.30481346401976	0.564843670931027	-2.31004352384625	0.0208857446284856	0.330133234155234	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11952333237634	3.02952723293659
Merged-chr13-92334626-2	5.78456974536972	-0.495743229901569	0.861071661099558	-0.575728191157194	0.564798917227038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47111615257247	1.64474942565565
Merged-chr11-72782741-2	2.39265051123903	0	1.43944422093394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37101815-1	1.38753825435594	-1.94827733852891	1.59386425404549	-1.22236089653423	0.221571179826453	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	0.303163067301871
Merged-chr1-170714547-1	1.70961825193587	0	1.44309989603233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23879045-1	4.82557335649371	2.20277628767831	1.24329494540577	1.77172463848423	0.0764402776630685	0.772345177228019	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.815775955292901
Merged-chr14-47396366-2	8.4636996774381	0.662051914718964	0.66868962865388	0.990073550343111	0.322138170342184	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1799653900261	3.92631738059718
Merged-chr10-10477097-2	3.04593003657072	0	1.44682968098057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99181170-1	2.61431519706785	0	1.42957830633186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-6152434-1	2.74045709657359	0	1.44048412068199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115158168-1	1.95897739175864	0	1.45316134172536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4469639-1	5.6420278004912	2.58454130123647	0.90352625711572	2.86050491713098	0.00422966993890316	0.109335051485611	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	3.68168776087851
Merged-chr8-66497409-2	2.9893663892175	0	1.40620568891709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138766194-1	2.55829874738454	0.670353760109952	1.17160245003116	0.57216828122212	0.567207973902134	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.46102447007039
Merged-chr12-103326783-2	3.28805258275548	0	1.45161251365824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66930539-4	3.53869711373508	0	1.40178633969159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151086581-3	3.34337233751709	0	1.38691785821695	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40577892-2	5.7639692532485	-1.48215660264819	0.839675284082542	-1.76515449572586	0.0775378039128867	0.779378232784876	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90351574482649	2.29190231850885
Merged-chr9-121476276-2	2.8808061823339	0	1.38927134800365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66552234-3	7.47463052550679	-0.235510160176119	0.767364442531178	-0.306907835603225	0.758913524773355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61648329233324	3.06975861641795
Merged-chr14-27379906-1	8.45006638519325	-0.174824911759321	0.622702575283289	-0.280751868867391	0.778900722401142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58513957598858	2.65069523025646
Merged-chr19-11851103-2	4.82587983309055	-5.02573748910741	1.29557078118018	-3.87916859666231	0.000104814092398963	0.0061198595582333	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90350651996808	0
Merged-chr4-86898932-2	2.89488306045974	0	1.45939202479603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118660105-3	3.78717751411093	-1.28434733587738	1.37362664950608	-0.935004672731997	0.349785891326881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr6-87553851-3	4.30084893345204	0	1.42012718963731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30710342-4	6.05987743347045	0	1.36931691678335	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50634431-2	4.08997772407105	1.2405399486054	1.39309348738679	0.890492963923366	0.373201244796738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.71701424649985
Merged-chr6-71555786-2	2.72416680834048	0	1.63744718014791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111422285-1	1.94223617094876	0	1.41368541925257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23195821-1	1.85616952831348	0	1.52558456479422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105136425-1	3.12979097690777	0.631226059967825	1.40974071103905	0.44776039666371	0.654326128026938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.600815099743027
Merged-chr17-71012134-2	2.67090857741783	0	1.42424598241398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-174353885-2	4.89281298977815	1.81008954322808	0.84143202074545	2.15120116491938	0.0314603251391852	0.436689262049973	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	3.4652110229274
Merged-chr12-80001944-1	1.38232399721206	0	1.55248606465507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-65111708-1	1.96079927428935	0	1.51700845062585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52343466-1	4.51410887767093	-1.20130457843745	0.778825171018944	-1.54245731024046	0.122962504107626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.51460948156002	3.02486902694461
Merged-chr7-116462279-1	4.38361970749014	0	1.38129319665297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121264447-2	5.38043754424859	-1.0494745800467	0.765767115810055	-1.37048791777449	0.170534644428211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46890512470268	1.81350735141944
Merged-chr5-20674699-1	1.24771054317147	0	1.65123246027507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11392678-1	1.80624766653231	0	1.68428285636288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34007092-1	3.78207434363263	0	1.41126876819838	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95347689-1	3.21638676064925	0	1.41773741921326	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9162397-1	1.34033476344916	0	2.34550390320725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23130785-1	2.8512356953991	1.4956109334075	1.80173527205456	0.830094718466615	0.406485232985502	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82990167917397	2.78124601765533
Merged-chr2-160850523-1	1.615595955577	0	1.48270129123152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-62541510-1	1.37449428904852	0	1.87692330183342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-66794455-2	2.29453660538256	0	1.59912939893916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126252855-2	7.38690906737467	0.163668108468295	0.884702605065844	0.184997882374398	0.853230696526701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19422870637438	1.75680118808515
Merged-chr16-4630826-1	2.55792050973759	0	1.43263934412484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71387725-1	2.2557600563039	-4.92522295611688	1.45100516719183	-3.39435245819888	0.000687910958615552	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92086993437728	0
Merged-chr13-117287645-1	3.43119676479305	4.81008425195947	1.42848661258796	3.36725889453395	0.00075919379579425	0.0290014164058887	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.97668491437241
Merged-chr6-3488338-1	1.95548850460338	0	1.45522834403148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124030547-1	1.80073516960057	0	1.53791972207998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47449101-2	6.61630145817163	0.430066749737826	0.932356102301959	0.461268767025822	0.644605790115068	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.45526469271556
Merged-chr1-91035608-1	2.11276500226377	0	1.46548987104645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36173530-1	2.19965956440891	3.60364326592299	1.30194420050635	2.76789378878254	0.00564198392606537	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.737158151675
Merged-chr11-32536927-1	1.66851875590154	0	1.54876358733205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118480909-2	3.95401187382888	0	1.39866945479073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92751490-1	3.11982102767533	0.327131470317141	1.08113376736337	0.302581863773378	0.762208537544945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.33175291456033
Merged-chr9-116181823-1	3.171846866529	0.72621446635955	1.03236927167419	0.703444480851166	0.481778794525148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	1.57821186140479
Merged-chr7-83399930-1	2.22076192622396	0	1.43294545918766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36016863-1	0.877120516115201	0	1.8607115494156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86206288-1	2.41845540683122	0	1.43059816422405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100434082-2	6.71829748431832	-0.163527076295658	0.813840101706643	-0.200932684384485	0.84075121042825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11916498288763	2.01086664255504
Merged-chr7-43539877-1	1.89392900793794	0	1.45007257787105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88248807-1	1.79054042306538	0	1.47703977615024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62582758-1	1.60013834419796	0	1.47802890840146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67443333-1	4.0910605184658	-1.22569866485705	0.981289003483866	-1.24907000945232	0.211639468669622	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50692356123179	1.49092140105159
Merged-chr12-105796200-1	2.40636627590731	0	1.46702405777986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30935541-1	1.86568160096899	0	1.4798112932359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4288794-1	2.41846192734217	0	1.59948601153809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32051781-1	2.95492106966017	0.925528688558361	1.48027972951668	0.625239047798455	0.531814177504408	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	2.28621658124455
Merged-chr3-77659413-1	2.54508724594407	3.05388397141738	1.88219506362019	1.62251194387025	0.104693777824854	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	2.732447032999
Merged-chr7-97944238-2	3.45817336875475	0	1.37346295275465	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122125864-2	2.06908813240257	0	1.46259997012779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57037968-1	2.33890712099184	0	1.39848738902657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-118310449-1	1.2022596090546	-2.18342037424618	2.45032693513575	-0.891073082100864	0.372889964654847	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56706844884727	0
Merged-chr7-36713273-1	5.20751233640634	0.743790815817435	0.995073757241734	0.747473049514605	0.454778064983963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	2.19776446004195
Merged-chr9-77734653-1	1.91935543105353	-0.895900001287981	1.26443324131211	-0.708538791939937	0.478610731227751	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0.600815099743027
Merged-chr10-54016356-1	1.04877902150371	0	1.76536099281277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43658743-1	2.65231477521013	-2.23256731310107	1.84654306160035	-1.20905239608447	0.226642716241404	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27508942431803	0.788686275880602
Merged-chr10-105186817-1	1.43773411097207	-2.52122270915862	1.44914054298453	-1.73980551532021	0.0818931737176437	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0
Merged-chr10-40448194-1	1.62130747018391	0	1.48257024644181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156986117-1	3.73168379199687	0.898877622626655	1.2082797026829	0.743931740830173	0.456917771607864	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.85699717634292
Merged-chrX-109139851-1	2.03684952883105	0	1.43633150118586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114647491-1	1.51802538173141	0	1.48511076661429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3942406-1	1.7168874106055	0	1.50487745525487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4077761-1	1.85784139629819	0	1.46906045130031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137122805-2	3.5987749273614	-0.0784235729999502	1.20842787611317	-0.0648971896048896	0.948255858249359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.67591700901439
Merged-chr9-118667658-1	1.80842083645994	0	1.46917127818749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55719897-1	2.04769199996614	0	1.67137054273012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-133457001-1	1.29356922371264	0	1.59747203625957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20821044-1	1.95782252513658	1.98949997527208	1.23388251301073	1.61239012166369	0.106877073105695	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	2.23795018088832
Merged-chr14-21758301-1	5.76695951772402	-0.880887796177982	0.91777783334411	-0.959805046683563	0.337153341912973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68597815110705	1.61881475415901
Merged-chr4-132619562-1	2.58098305653191	3.52526118497195	1.3031963864791	2.70508821352422	0.00682862530389463	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	3.34493977622732
Merged-chr9-110864851-1	1.44389867752431	-2.03681458755193	1.59864324228615	-1.27408951145295	0.202631695130763	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr16-76561853-1	2.71839032753661	0	1.43109797025807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57949513-2	2.30426150077806	0	1.44374068530853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15586876-1	1.6287370532739	-1.29850520192684	1.50107854206404	-0.865048140746412	0.387012366594953	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.413263464506793
Merged-chr3-108232317-1	2.1623046986054	0	1.48376676993053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83740220-1	5.37903514920777	2.06626681224639	0.797444419774195	2.59111075456704	0.00956666973134883	0.195061740407499	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0509200531463	4.05231570470517
Merged-chr7-102314280-2	5.67436587227692	1.94210371110281	0.929295445249625	2.08986681364948	0.0366297654378151	0.480640538736569	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	2.62125646170901
Merged-chr3-79177778-1	2.95306154901108	0	1.42740767740186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24092922-1	1.60079384695992	0	1.60625324806299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75701504-1	2.1026574675062	0	1.4055421488616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118455779-1	4.1420478071712	-0.863091686615501	1.07628516858727	-0.801917290887126	0.422600803388738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69334296600841	1.95465925600843
Merged-chr4-124675286-2	2.81038075294404	0	1.40561855456573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44607719-2	5.47820511094444	1.83200553214549	0.788082687537	2.32463618490474	0.0200914222200541	0.32122047660586	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77338015316878	3.57490028370608
Merged-chr8-126693832-2	6.98706448300056	-0.200924697524381	0.704235838501167	-0.285308822044631	0.775407554611923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63911979784309	2.79485797814364
Merged-chr6-128846257-2	4.78058253263833	0.402472504698701	0.997562893163512	0.403455769512802	0.686612966786605	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43393032742955	2.07633404862785
Merged-chr13-110368826-5	10.3516557341276	0.997722490107031	0.812620119873809	1.22778462618175	0.219527828368167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.16539704473273
Merged-chr7-132305969-2	2.67443355905661	0	1.40928680145405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-69778224-2	2.30002206033574	0	1.4461805480709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-89158163-4	4.24495699599843	0	1.36070687774931	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47756325-5	12.0910333560396	0.367803796608048	0.659123778192661	0.558019311056534	0.576831197597816	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21307952544685	2.45989369800074
Merged-chr1-85995024-1	2.46622844747601	0	1.42023632885766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145126586-1	4.06027264634979	1.12013619728996	0.953913556338803	1.1742533585424	0.240293559240296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40590822918039	3.01548355011296
Merged-chr14-122079646-2	3.07920988429048	0	1.41952029253347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58491003-3	7.75780716711334	-0.919606061504269	0.646537328918214	-1.42235570998345	0.154923013719731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56069189104354	2.91604171675083
Merged-chr7-39532128-2	5.30466965079621	-0.358508119207228	0.77253145926205	-0.464069281462904	0.642598109354602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04002873292877	2.67651213481576
Merged-chr3-144678307-1	1.88877331929508	0	1.42341760252072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10356292-1	2.71592976852642	0	1.44465545112238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16334501-1	2.03670688384803	0	1.48009837997222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66359116-1	1.7947839589014	0	1.43302293574807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102736769-1	2.36718540024712	0	1.42067588005058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114934727-1	2.00186405149877	0	1.49380096289138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36254376-1	1.36998182135289	0	1.66153277679519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108034366-1	1.66256411514651	0	1.42613978812124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102021837-1	3.21051565998841	0	1.38911191481811	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16229220-3	8.70849758155179	1.2102728269609	0.607019786770365	1.99379468896744	0.0461744962305359	0.559345179297054	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26697506892916	3.96306397018935
Merged-chr15-97667680-3	4.36961585465146	0	1.3676016512276	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-22029343-1	2.87758163236856	0	1.42436336606081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-95658999-3	3.40460465520335	0	1.3825750551113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34520865-2	4.28665710111258	0	1.41500748794552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50138667-2	3.15165248058355	0.167471451117139	1.14173923154281	0.14668099903236	0.883383816944225	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.13743241080208
Merged-chr12-14459560-1	2.78447395000499	0.488066971219266	1.79343084630608	0.272141505887742	0.785513216364849	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.270877049729	2.2471115197996
Merged-chr4-102329246-1	1.98934711350655	0	1.50164792655801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77775657-1	2.93523051372422	0	1.4084892047952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117432647-1	5.95102580872847	-0.261293949538493	1.30937071950647	-0.199556890684847	0.841827145787475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70997825068887	3.09941507324605
Merged-chr18-20605477-1	1.64346057626346	0	1.70606689035301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91606803-1	2.28356185681373	0	1.47865215032462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145318048-1	2.15121576186141	2.19609507689156	1.36697435553611	1.60653714387369	0.108155940554318	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.67681329176461
Merged-chr4-86666958-1	1.39980616300644	0	1.59645548071804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16411766-1	0.810870549514198	0	1.97536929327702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88332215-1	3.86503158919731	0.113482128416214	1.01122807972547	0.112222089844482	0.910647314638161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85545068682378	1.9872420510626
Merged-chr12-34908172-1	2.41932244443044	2.93821453394083	1.44426501487067	2.03440123778387	0.0419111571741046	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.75191520103598
Merged-chr10-26779552-1	3.11910553579323	0	1.41437258381785	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-88157-1	1.01529156065681	0	2.32799620546769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91353052-1	1.72535627485005	0	1.53662004067351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93791235-1	1.44093726543359	0	2.42037382410113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139470379-3	5.21762837686563	0.479931763310308	0.942217137858523	0.509364289850532	0.610496902174726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.25163494309627
Merged-chr8-90982251-1	2.67522900931759	-0.616468120409219	1.18836559404789	-0.518752918711965	0.603933053742236	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	1.13341594473881
Merged-chr13-55587133-1	1.87343950627762	0	1.59930372966738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125661718-1	2.17901086021296	0	1.4221200638725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53264520-1	1.74474772703807	0	1.62484501983946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103337929-1	1.78534828223703	0	1.54881945616364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17553240-1	3.06879554611712	0.80135627482542	1.21608617201548	0.658963396892587	0.509919273664198	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86333058947232	2.27585415073364
Merged-chr9-23694680-1	1.3307008532396	0	1.76959836896354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11297656-1	0.979599162518918	0	1.95043559530523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23626002-2	1.87863426838439	0	1.4978516267243	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37581575-2	6.10264911107334	1.09568539154324	0.790545462095655	1.38598656760194	0.165751005140835	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14680093235515	3.10972495605209
Merged-chr11-115208642-1	6.53397623279688	0.98616297428493	0.842763090426634	1.17015444255598	0.241938822589624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77249093293001	4.31352353438725
Merged-chr7-30394015-1	5.980574357518	-0.518303487232445	0.810274700611644	-0.639663915016966	0.522391119973062	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97481476057421	3.37491821458366
Merged-chr15-57885972-1	3.40543071158156	0	1.3726107724222	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20829057-1	2.87181576035257	-0.694957326885529	1.43507190113994	-0.484266555796607	0.628196707891428	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	1.43571405234885
Merged-chr8-111177339-1	1.93290331724361	0	1.46661159702953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61470349-1	2.36113813016623	0	1.43954708258988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13473397-1	1.47682792075976	0	1.66218976882488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60009771-1	1.21689123060094	0	1.561424514058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118463227-1	4.02380989304505	-1.34058374731678	1.21157839165555	-1.10647710172922	0.268520069731905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0991499147123	1.0754104773304
Merged-chr6-136964264-1	3.14725711681058	-2.01660412035465	1.22807732877157	-1.64208236167982	0.100572936527975	0.914527309589192	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20458646825563	0.67591700901439
Merged-chr9-66131111-1	2.18121639405725	0	1.43565610479794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123344161-2	1.92154711644905	0	1.50827295616689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137702971-2	3.43567597504128	0	1.40197176054736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-31130029-1	2.91666579782865	-0.891242831518262	1.15402755697908	-0.772289037751648	0.439943256615121	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27156148143412	1.34503387201423
Merged-chr5-5501690-1	1.95057904725407	0	1.50148110640054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89332360-1	2.24597522852704	0	1.42050185064035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-9585080-1	3.02279373366214	0	1.40342396929963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92209925-1	1.92040224238284	0	1.45542561245032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26165090-1	1.69483897203777	0	1.49988766454597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-104418125-1	1.28992092574455	0	1.51493253283157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83167072-1	1.07226582654586	0	1.80625172071991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52333865-1	1.1316230936228	1.97842496637315	2.37029788460341	0.834673556950066	0.403901534064675	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30064958020929
Merged-chr17-36016554-1	0.537001957842239	0	2.22084883173362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20699333-1	1.50268661290905	0	1.50885314545013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14823455-2	5.08832303756179	2.2533190502747	1.18567379766878	1.90045445442506	0.0573735065798479	0.647988041590266	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.70266130792036
Merged-chr8-92840373-1	4.24744249046273	0.479940954171	0.872400301673285	0.550138455076713	0.582224412557186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17727924666045	2.48269016652649
Merged-chr1-134303800-1	2.32692108002352	0	1.45056481422243	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67359954-1	1.71139330403063	0	1.59005781202829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178144925-1	2.52726240018445	0	1.40448040024256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-66794-1	1.02578052140425	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-85410841-1	3.32097737364045	0	1.42122533078578	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119486063-1	3.1045939195539	-1.46702853337466	1.22374462113065	-1.198802845008	0.230604616066721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.679405493272835
Merged-chr13-94156130-1	2.12907433988828	0	1.43334150230052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53076258-1	1.28565892996824	0	1.55955406626516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34617111-1	2.64655674233382	1.0563931267157	1.16000055582809	0.910683293562362	0.362462269138243	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.74544410475497
Merged-chr10-7390832-1	1.832680010782	0	1.55539353766508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12715174-1	1.19499521240932	0	1.97928677880434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34693285-1	1.69781234339608	0	1.44694611329467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120019440-1	1.50073449394478	0	1.50309883202042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53650882-1	2.40838178808212	0	1.44784460424616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80116484-1	2.9437483595575	0	1.39845912403948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170258557-1	1.7143443730971	0	1.49028170099016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149047608-1	2.9019277054957	-1.21978636420781	1.3210318100241	-0.923358813127714	0.355820247928216	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.55634759613363
Merged-chr2-181487786-3	4.43291399449715	0	1.38793095646851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12433896-3	10.1516126624532	-0.390192433645045	0.546242474564587	-0.714320932212512	0.475028751519989	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3502917529497	3.86424413481258
Merged-chr6-115227704-2	3.10077987859446	0	1.38783320094601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85078085-1	1.58903621956866	0	1.57605456647143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84891850-1	2.6404647808202	0	1.42493439859715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12465288-3	5.28102818864295	-0.951525296082511	0.713723713833096	-1.33318436481855	0.18247130897921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12426893426501	2.41387450741157
Merged-chr17-34350574-3	7.44875878975623	-0.0328158306219597	0.82629139514276	-0.0397145980399446	0.968320663306185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18535014306825	3.96735432831238
Merged-chr17-8749600-1	1.94461913849297	0	1.41078240257788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85517116-3	6.68222656546687	2.01866651817492	0.812803477525298	2.48358499193563	0.0130067291886525	0.241995150827261	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	3.50770853542852
Merged-chr17-24676360-3	7.02523006970412	-0.153344777371261	0.776897494853115	-0.19738096516871	0.843529424204194	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23100068425159	1.69376326265794
Merged-chr6-134259736-2	6.25632700550546	-2.88781956586821	0.934070205394704	-3.09165151526049	0.00199046372034666	0.0620766594230201	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79296600897344	0.577068348605183
Merged-chr5-117159069-2	15.8402162656112	-0.151313317145379	0.499642833700328	-0.302842964893063	0.762009538702885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48952317923639	3.1880353339785
Merged-chr19-11557471-2	4.92927735450677	-1.90672874529116	1.3656683851249	-1.39618721943012	0.162658124348299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr7-67524813-1	4.62655153362278	-0.537419829834062	1.10873457523269	-0.484714594312416	0.627878812527684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.662147012823607
Merged-chr17-64735731-1	1.30310312376227	0	1.7114727207961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93494262-1	3.46997283453444	-1.55250544503844	1.07076097449862	-1.4499085062055	0.147084034974947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87459915472542	1.49169296430729
Merged-chr16-93924364-1	1.47087446010512	0.513266910389384	1.52747167431341	0.336023848442291	0.736852882597343	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.465515277017237
Merged-chr9-106365522-3	3.32275419750962	0	1.39511566898986	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116133543-2	5.29215918728976	0.505075322937156	0.735631297568755	0.686587594364756	0.492342648245468	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54664965985095	3.10829613751528
Merged-chr13-30631412-2	2.09641471431059	0	2.15620728499675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26566369-1	2.95827986214555	0	1.41967040533081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127110851-2	2.69333804684656	0	1.39856980244687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47262775-2	2.63493662895757	0	1.40357882166046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21358573-2	1.85959211096185	0	1.58300252413272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129756402-1	2.05186314509	0	1.46360717663021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20812248-1	3.7670642639504	0	1.46361648372582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165462437-1	4.28471992723266	0.445939179547074	0.985218324480894	0.452629806476689	0.650815332048195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.0687098978803
Merged-chr15-87116924-1	2.528449111302	0	1.46272350183019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44438650-1	1.97578345234015	0	1.46472618313606	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9072202-2	2.93219133147277	0	1.38898076149747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101938358-3	4.31080059129657	0	1.35882765631382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34622843-3	7.12865186869001	-0.562088263687373	1.23246947083533	-0.45606668318235	0.648342027284059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.55634759613363
Merged-chr5-65880728-1	1.47245960970123	0	1.46853710297956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117092869-1	1.86592365990924	0	1.43017831618668	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41407599-1	1.57527181813261	0	1.43663755648386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6281659-1	2.66839835052317	0	1.49283875282891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-61244238-1	1.94245532484826	0	1.49955599065439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55480445-1	2.49162388139051	0	1.43578586681513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-71180274-2	4.64788427928489	-3.52309291062734	1.24983623171301	-2.81884363825702	0.00481969900685415	0.120070585844906	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27440275823902	0.577068348605183
Merged-chr10-104585230-1	1.54969113642293	1.92783506299486	2.43782103915799	0.790802537195563	0.429059229132589	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.45451904642141
Merged-chr7-96151515-1	1.40123334490228	0	1.49220716481022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107738041-2	4.22302920636205	0.623094347916239	1.38080795032556	0.451253447497409	0.651806892422524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr4_GL456216_random-34502-1	0.996521357332801	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31042028-2	3.81029850967677	0	1.37915012042234	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123516950-1	1.28693047697789	0	1.68646856244841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-50587287-1	2.92216453659454	0	1.3902969811136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-11657096-1	2.43444967224947	-0.96893316979158	1.30149201062033	-0.744478768893677	0.456586880938556	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.71701424649985
Merged-chr4-22346588-1	1.79992812773687	0	1.55967949651495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121636990-1	2.27297948446935	0	1.44357654888881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17630239-1	1.59385015532473	0	1.46081067442769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25106301-1	3.94297945714636	-2.29301523960376	1.07734694734765	-2.1283907150329	0.033304702334679	0.453271720660623	C57BL6J_F1_Control-BALBCJ_F1_Control	4.07122353470795	1.85699717634292
Merged-chr10-130093015-1	1.74166911431902	0	1.47266658869902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79949220-1	3.34940015599315	-0.628661287031475	0.817735581820467	-0.768783089555588	0.442022089321195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32785350547649	1.83076147239238
Merged-chr13-91635748-1	4.8639549309497	-0.161734607961548	0.822829412962889	-0.196559098901393	0.844172580465296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26392576877833	2.55299057508453
Merged-chr17-27916637-1	4.52385101605605	-1.54952629622326	0.893329563323336	-1.73455168153035	0.0828202441684613	0.811029661818301	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42844712608471	1.06872581468896
Merged-chr7-102384170-1	1.96770847359934	0	1.49087313734912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-25978603-1	2.39181662505643	0	1.51803625179379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44657763-2	2.55266449585228	0	1.46093875088065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16055930-1	5.63289715189862	-1.00853903981711	0.884226181907546	-1.14058943339744	0.254040816489452	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76139440711178	1.71483396990367
Merged-chr18-61475931-1	2.50409729239399	0	1.38390421180887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99130287-1	3.65803504409407	-3.73095342773672	1.1567588410441	-3.22535112363536	0.00125818254603251	0.0431777430680438	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33652457236477	0
Merged-chr15-99265855-1	2.85882662817608	0	1.42888095942256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72294391-1	4.14305718341549	-2.36475616283383	0.975071483736931	-2.42521312772985	0.0152994019985068	0.271060575568744	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7476138100957	1.06633037676026
Merged-chr10-36892521-1	1.99665628259686	0	1.68115202912066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145905775-1	1.66376729919191	0	1.47024430666406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72821090-2	3.06482661711341	0	1.43482915449873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136440122-1	4.53516976365981	0.0459823576370499	0.99102794686201	0.0463986487794299	0.962992513472578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67800608098903	2.05613740944162
Merged-chr19-55804073-1	2.54924708210942	-2.1768197897475	1.28641594457536	-1.69215858908376	0.0906157398716339	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5798125855659	1.32509503823899
Merged-chr13-97254915-1	2.40499044085942	0	1.44621690598608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148694096-1	3.09403977448809	-1.78612087839478	1.24167816869057	-1.43847328835487	0.150299811200479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77802408088656	0.601513806634888
Merged-chr5-151173879-1	1.33957492675881	0	1.72413072297344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5991141-2	5.02626015066515	-1.51356012149025	0.924145363504162	-1.6377944220281	0.101464585571286	0.91925223451159	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51316779593416	1.49440988531003
Merged-chr9-61943746-1	1.84302774315548	0	1.44473155928886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124809607-1	4.12591026649215	-1.7447710635568	1.12844545630008	-1.54617226186324	0.122062970604168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68884729081939	0.67591700901439
Merged-chr10-80506390-2	3.57549637125284	0	1.38708775243798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7714297-1	2.77240928952582	0	1.39893184280753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115986027-1	3.7673773232927	0.858982624227944	1.08639579642916	0.790671896054187	0.429135480104337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.30139522650344
Merged-chr6-100335554-1	2.76413300562421	0	1.4172667340743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5208610-1	1.75444639099504	0	1.51536455641321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15829682-1	2.52158338321623	0	1.41901428686513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76765945-2	7.07689128224089	-0.31502666017778	0.761716976441864	-0.413574424518322	0.679185806787388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57618756717262	1.92627661828565
Merged-chr6-143150786-1	2.302211593625	0	1.39639084783441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89992619-2	5.25357318786059	1.73056923885826	0.87325319942625	1.9817496689337	0.0475072651458116	0.57007669449474	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16448544747254	3.46921465948461
Merged-chr3-47655981-1	2.35748754459057	-1.47539764207579	1.27661186830593	-1.15571355609724	0.24779834140474	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17442242701374	1.4277097602107
Merged-chr6-8691038-1	2.00147260580814	0	1.43683388764828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145344347-1	5.34028830037677	0.56970292230039	0.731174349200045	0.779161526828293	0.435884570280123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36908422580096	3.70109254550233
Merged-chr14-120572392-2	2.83528665386978	0	1.38963657043801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40140948-1	2.17985169795461	0	1.47279524478794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62679702-3	2.45082541073441	0	1.44959575531917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50396975-1	3.2932268952791	0	1.42772289277104	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-27113267-1	2.20554981415098	0	1.43298937445435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-139126052-1	1.93441746516089	0	1.48516484718867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93687736-1	2.03963053265737	1.84911497367732	1.43375636518695	1.28969957419245	0.197154987503518	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr9-71140707-1	2.36294742090822	0	1.40477152361625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32200784-1	2.22614254288161	0	1.42573773050667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97570179-1	3.61899395829291	1.76432994224148	1.44463733350737	1.22129610063305	0.221973929273193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr3-78965325-1	2.91561183426794	0	1.42793364525174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25427666-1	1.83424236339366	0	1.41415062265793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105425029-1	2.7342939761133	1.84465885404358	1.42477271893582	1.29470394086531	0.195422379965682	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr8-92408856-1	2.34237188206417	2.30996338868129	2.21257806360532	1.04401441317613	0.296478721258788	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.90562432554962
Merged-chr11-107147517-1	2.01694178238244	0	1.42823067564071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93418556-4	5.95721041808665	0.0231874855192534	0.706321241091895	0.0328285264130073	0.973811329680305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39887816450513	2.26731916206368
Merged-chr1-128723689-4	17.7226212965341	0.127659472332862	0.41804162138236	0.305375029191409	0.760080537876872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	5.03819374583991	5.20169884106308
Merged-chr6-17800377-3	3.7154072753445	0	1.36951805229551	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-45416118-2	3.66248508190981	0	1.38567444315872	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32445927-2	3.05727832267612	0	1.41793901092914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84615278-2	2.27999455299626	0	1.42088667065329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40343214-2	3.27031481747069	0	1.37504949201439	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-152224387-1	1.65889213968867	0	1.6756731841928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107334689-1	2.0724974882794	0	1.45065601391891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127557572-1	4.21093705187254	-0.358003217442855	0.775778992577611	-0.46147578223709	0.644457292524497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99170652413272	1.97656658922368
Merged-chr1-88241740-1	1.68322681715414	0	1.60166227166887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-20362363-1	2.35286220130992	0	1.41356309399007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119431409-2	4.94737613222834	-0.775772718791343	0.780978399638878	-0.993334411233471	0.320547013246667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	1.66683653681755
Merged-chr3-101553226-2	6.52160513486156	0.094169070204954	0.48949407370488	0.192380409209467	0.847444236964268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99754678527895	4.15857294250243
Merged-chr2-70702543-1	2.27952601026142	0	1.46974740113693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70437179-2	5.62317528953034	-0.107147005834767	0.802631037372281	-0.133494720295833	0.893802139494616	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95294019622591	2.77107229933057
Merged-chr7-131800727-1	2.20045394968996	0	1.41808455596082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136637210-1	2.42106438760358	0	1.4027398892683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48492711-2	2.54804438468288	0	1.43044377640206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12841064-1	1.93920136645255	0	1.61336731957242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154187750-1	3.28507701933341	0	1.39031518617071	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16701975-2	2.33140893430307	0	1.42026651754497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88252103-1	2.55366899662341	0	1.40592033455134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-43954129-1	2.22784571875791	0	1.44594264703178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67290189-2	3.3498287862457	0	1.39620099376525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50364749-2	3.28563002669861	0	1.37377567936476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53648925-2	3.21137007195643	0	1.40056077608996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79928961-3	9.01730296453538	-0.536354195239713	0.58557374383133	-0.91594645574513	0.359694979289404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70180116936528	2.59291374658754
Merged-chr18-61121487-1	3.13393578806151	0	1.39095545901083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55661779-2	2.95891799574649	0	1.41196906427683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32881665-2	3.28872596982106	0	1.39154306610592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55818930-1	2.3769526030019	0	1.44269418444603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94258931-2	3.39559692289789	0	1.37841166984319	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-130229816-1	2.17273825679205	0	1.42134377701999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4889697-2	3.20885994554617	0	1.42694936774853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34175060-1	3.94517236952138	-0.808895815462264	0.85790802662843	-0.94287008671689	0.345747357095543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78824446252404	2.49895324106153
Merged-chr6-72000297-1	2.00673516575615	0	1.44942274909836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63133290-1	1.20026810512403	0	1.59292770091775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43029336-1	3.005830841075	-1.37101463108915	1.38444223058323	-0.990301076348684	0.322026980644408	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99013578927945	1.03321995648104
Merged-chr3-62497279-1	2.21069756232906	0	1.40832638311497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115897627-1	2.31317383393589	0	1.53893852519492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80781666-1	1.98905491768774	0	1.41995982148194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73655752-1	2.64032213524097	0	1.41088575321912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100148296-1	2.42596405468965	0	1.47521939475041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122259008-1	3.70225741854282	-0.549574560061249	1.25693872982807	-0.437232577069548	0.66194268633195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7337995627857	1.56203317187393
Merged-chr3-79673210-1	4.81651585443419	1.2265769039547	0.862490554748333	1.42213372332246	0.154987434478795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.08894288310984
Merged-chr9-64013716-1	3.08354358246505	0	1.42490645270345	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93810600-1	3.45686333504999	-1.53389587553561	1.11418324387216	-1.37669982381426	0.168605073248145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6861536412647	0.904676873936758
Merged-chr13-97219659-1	1.75793945499716	0	1.47955178734069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88054880-1	2.08189338306811	0	1.44799686147171	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56407530-3	3.26290577830809	0	1.42399851707987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119351236-1	3.59158988687278	-0.259659305574813	1.26049518091237	-0.205997856641441	0.836792585554517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16739313000904	2.0352295179067
Merged-chr7-83483208-1	2.68893338330764	0.778014704468939	1.19044502078197	0.65354946334093	0.513402112151889	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.837303648891292
Merged-chr2-59340259-1	1.98944326501578	0	1.44410742255609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75838097-1	2.53523715092356	0	1.42893504027584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184016609-1	3.81095777222575	-0.890554001126883	1.11443983789183	-0.799104600219187	0.424229762453523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52352953733079	1.01784625364355
Merged-chr3-15266465-1	3.04919823988777	-0.990622963665493	1.26974683933805	-0.78017360073283	0.43528869895221	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62559269623071	0.788686275880602
Merged-chr1-7627857-1	3.4249323844652	1.33272604695917	2.0501821576134	0.650052504851856	0.515658306958675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56895075920593	3.71528859031526
Merged-chr12-28902795-1	2.51047575098275	-2.97692731905205	1.41190753120295	-2.10844354411488	0.0349926412773228	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8342600902674	0.724326877898254
Merged-chr3-108886312-3	3.23886637182173	-1.30186047974528	1.35095233365389	-0.963661298266662	0.335215763655233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr3-13561130-1	1.84264357138007	0	1.43369383182803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-131802195-1	2.49083871220796	0	1.38769206956419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64552092-1	1.47818608204199	0	1.55442625502264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67032277-1	1.31367857896875	0	1.55691697180878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38808447-1	2.9754553933143	0	1.42984367911717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22048266-2	2.54200077237333	0	1.43663861573324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20387029-1	1.32660202562664	0	1.538340394387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97415943-1	3.21490775475526	0	1.42396212083061	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31089433-1	5.15881685315188	0.190943574196581	0.820895220430993	0.232604075945686	0.816068861974253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87368577136467	2.22377753961315
Merged-chr3-60611869-1	5.64867036373868	0.134196424826314	0.623686914534714	0.215166330572172	0.829637640428075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35370741293215	3.49303513979823
Merged-chr16-76610924-1	2.22229189339795	0	1.43992316605049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78199521-1	1.38482217182788	0	1.53933681419673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18176467-1	2.38023724305229	0	1.39665340534816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16048881-1	2.60893916233284	0	1.41370109762676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50115959-1	2.13408121273524	2.40094653127829	1.31150687882815	1.83067780279092	0.0671486481168095	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.17858215524007
Merged-chr8-111545579-2	1.99006253012946	0	1.57133847765782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87596697-1	2.03598840244358	-2.77971080602847	1.40994344269411	-1.97150518372355	0.0486661206697012	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48316304163271	0.303163067301871
Merged-chr6-108428584-1	1.15756525956292	0	1.51956822352477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-100401996-1	2.95287163382405	0.413711715922369	1.44859366829934	0.28559541918202	0.775188012357995	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr10-80876207-3	2.52821203624465	0	1.43452532466567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82991426-4	6.15807860588634	0	1.37709061064312	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82746516-1	2.2368817505534	-1.82225397473494	1.32390709216691	-1.3764213406791	0.168691224684325	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38713383244935	0.577068348605183
Merged-chr5-67794504-1	4.45835513013892	-1.32853522272012	0.982905399827843	-1.35164098493386	0.176490192477856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57215779683075	0.662147012823607
Merged-chr5-148812274-1	5.93615489829893	1.47887765077511	0.776579923604949	1.90434700386026	0.0568650063652491	0.644338782439875	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86728154592049	3.12455071394586
Merged-chr4-134586302-1	2.8316986078611	0	1.53937095156909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17774787-1	2.44203557027908	0	1.40692718845864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44276121-1	5.93742129519576	0.117342527100867	0.661963913256617	0.177264235634214	0.859300841708608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31664666660969	3.1433781121232
Merged-chrX-140490754-1	2.84182328581662	0	1.44195793450021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35737015-2	4.06999402527289	-1.63021014518613	0.990417112808241	-1.64598341860614	0.0997671728811646	0.910092926774161	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2439391548042	0.815775955292901
Merged-chr15-34529952-1	3.1545207237163	0	1.46581201620956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-48886226-2	2.71375843983611	0	1.39146542932962	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83610039-1	2.89670864065696	-3.61323122604607	1.18729198395341	-3.04325412356853	0.00234034605941273	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.173597744938	0
Merged-chr5-101786126-1	2.03317767654531	0	1.48403483761708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14960072-1	1.59280878585352	0	1.51109106676814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43750578-4	9.57816486944643	-0.473480893677871	0.526747441507445	-0.898876494440797	0.368718449467543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12502712294413	3.58930057398777
Merged-chr3-78948358-2	2.64322979112355	0	1.4403815890713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106819118-1	3.01065673107323	0	1.39169167995753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25091027-2	11.7007745661698	-0.620222271987332	0.568832320963023	-1.09034288160227	0.275562132416842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.44133085663717	3.88467600808061
Merged-chr2-22986503-1	2.70631724050994	0	1.45246382449581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31087219-1	2.46829912974212	0	1.38985026911655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94401368-5	7.19387154172028	-1.21331981776168	1.13358298249605	-1.07034053659667	0.284466054348684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.13404870833161	0.55634759613363
Merged-chr4-85802000-2	3.19544416438829	0	1.42214902656758	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45733368-2	2.45011285880238	-3.74533574032352	1.31708121818931	-2.84366346478809	0.00445981259743053	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77167105195599	0
Merged-chr8-83772824-2	7.24233656743351	-0.392227825451384	0.665022126048704	-0.589796655010331	0.555326985533358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79207613586922	3.14698198213049
Merged-chr12-98212621-2	2.20103569655027	0	1.48002832416747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115491432-2	2.64744352094857	0	1.46191793042324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25072386-2	2.62284732973909	0	1.47294923508924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141287176-1	2.74129336345192	0	1.41234725687715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16260801-1	4.45008655749195	-0.268949391042603	1.04092870680721	-0.258374458580876	0.796117926636223	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82361065065357	1.44790810950236
Merged-chr2-166537079-1	1.80680641546435	0	1.69447444542366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-91390421-1	3.19265677936878	-0.941435033641562	0.834134844813227	-1.12863650223407	0.259051205698275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.501365184284	1.94919190003171
Merged-chr11-30799685-3	5.13021817820755	1.60323131300468	0.94777113903773	1.69158064322621	0.0907259597722165	0.855770471805781	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.46977098265323
Merged-chr4-151920500-2	2.88806214399384	0	1.41325659994803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26536696-1	4.96902207586965	0.110071484980818	0.901403459100207	0.122111229848944	0.902810928305091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62148194084923	2.81089242967057
Merged-chr6-136475366-1	3.99382408550581	3.14563677385285	1.24270227889858	2.5312875233808	0.0113644648049893	0.219415480222828	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.41478649953382
Merged-chr13-85207728-1	2.72287921712215	0	1.39490552089598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125503148-2	8.25920351460126	-1.16415120351533	0.629938555574779	-1.84803929401196	0.0645966586224145	0.697954634477406	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50372700163779	2.48059891267522
Merged-chr4-117473665-2	4.55995079439031	-1.31374647843164	1.02676466951013	-1.2795010555422	0.200720668148905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53382185020383	1.74294609266651
Merged-chr18-20717123-2	2.97613345507604	0	1.40315991693099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66295154-2	2.79017370208598	0	1.4225331145096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62782062-2	2.09826001237612	0	1.51253800542245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-65453689-1	2.3111272802007	0	1.4280115918269	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137864180-2	2.66843474913268	0	1.50466053160977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124010306-1	6.01845675235551	1.41117353739697	0.792502422241168	1.78065517251824	0.0749688005821724	0.763891021436834	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42488422888851	3.58568413174462
Merged-chr10-99380293-1	2.7745045112847	0	1.39604855087763	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47459464-2	9.45552396117779	-0.734978801064012	0.510385777079702	-1.44004561661059	0.149854493644234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35753167054027	3.45367260257327
Merged-chr3-66213712-1	3.22074482322468	2.84679246979341	1.33639978294281	2.13019525005059	0.0331554970579829	0.451817414032312	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.94927122251658
Merged-chr11-97546469-3	4.01768221209182	0	1.37758350410955	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27542361-3	4.15012391913294	0	1.39612534430482	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9877328-3	9.79767706171692	0.338036446873953	0.649981884569516	0.52007056642484	0.603014392254932	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10807930780775	3.06844947438774
Merged-chr17-17870421-2	8.14774607186774	0.00957233112016061	0.705613091303312	0.0135659772163239	0.989176248220767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4062301241766	2.32029488645444
Merged-chr7-114894228-3	5.94562325213162	-1.51648743126464	0.953388789585876	-1.59062855346071	0.111693194584638	0.973938139946477	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1439715376394	0.953310774576147
Merged-chr2-44982623-3	5.55169507328629	0	1.35827136645339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28869325-1	3.29190443580656	0	1.40204286125881	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39560115-1	1.88768928302447	3.04875777670769	1.68728394634246	1.80690261607509	0.0707774645834091	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.98133389375494
Merged-chr17-83058014-1	0.830626763636605	0	1.78486433428531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34004540-1	1.65539178492801	0	1.59524985790415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120752113-1	1.83852343030836	0	1.52657110800036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98789969-1	2.52085849234427	0	1.41609358755539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4836908-2	8.39326950819276	-0.428631833087386	0.611530715466428	-0.700916278196196	0.4833552650557	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09716266770032	2.29190231850885
Merged-chr15-78592448-1	2.77729127835145	-1.62690910264328	1.18525975657754	-1.37261819075088	0.169871073776103	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07703040623509	0.662147012823607
Merged-chr1-24766793-1	4.5502235013688	-1.24464543242506	0.786681193887317	-1.58214717994561	0.113615975187487	0.984152597110316	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97552083614616	3.0446437496859
Merged-chr9-107652602-1	5.87596664521816	-1.01159769321576	1.12308830135322	-0.900728546452556	0.367732666879681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30258280742445	2.70193137701898
Merged-chr16-17292991-1	1.79592600887461	0	1.46711317133378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121598414-1	1.4914625944213	0	1.55410385839709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55791014-2	6.02116959215622	-0.96835092032139	0.734354880911408	-1.31864163430026	0.187288947786595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85412670560938	1.55002395216531
Merged-chr8-106017310-1	1.74402511306182	0	1.50594632332532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98799921-1	1.9976486556776	0	1.44865779291848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-66893078-1	1.48972489595678	0	1.47694429374047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191287062-1	2.17259529988137	0	1.41618389703733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24782078-1	1.46870636355252	0	1.60772823796599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11455187-1	1.7796583097216	0	1.43483658671714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22747798-1	1.12634455709352	0	1.61703178765674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77443864-1	1.12746022555679	0	1.72126395461619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4278552-1	1.74923188437263	0	1.59743805179351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10594454-1	2.14843350750112	-0.33194066512743	1.58570270953879	-0.209333479176545	0.834187918080103	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13454943088463	2.11005512232597
Merged-chr9-103175244-1	3.82754023731363	-0.641651790301947	0.852609666668398	-0.752573909710904	0.45170600065785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68904493538903	1.84252025419888
Merged-chr16-28971909-1	1.63454463978974	0	1.50764746032526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106322758-2	5.34249161467931	1.0218817164098	0.731342865759251	1.39726763499488	0.162333104592055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30831180799264	3.16982395992248
Merged-chr13-111801038-1	4.23907794939272	0.92433621604043	1.0636683255203	0.869007935897958	0.384842790132174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85375318208663	1.98971611666123
Merged-chr4-64497890-2	3.99689883263018	0	1.38941986402827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-107504442-1	2.10441295355247	0	1.45195367769798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68002358-1	2.06196684088453	0	1.5174860078164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-50421282-1	1.48868225271362	0	1.69056849364918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89126683-1	1.58183860938442	0	1.47342011467709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139292989-1	5.19037947603847	-0.00575055843025647	0.815902941228678	-0.00704809131046473	0.994376483318876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72948510844482	3.78411109823717
Merged-chr4-10913809-1	6.61943507946267	-0.99347447520895	0.926769613896132	-1.0719756672129	0.283730961517711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00155511955616	2.46493914150125
Merged-chr3-103097823-1	1.1485892845378	0	1.55618798220697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96821662-1	0.987129867506394	0	1.75984832281325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97422799-1	1.73595340736121	0	1.52389403989611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87329435-1	4.76749026988139	1.08202441318093	0.963528686895104	1.12298100502608	0.261445561834834	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	2.19583687562848
Merged-chr11-119454889-1	3.67020523634873	0.27352843860363	1.13987527025254	0.239963481743954	0.810358566894061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6342703608096	1.77654187531701
Merged-chr6-136969063-1	6.83557151406118	-0.445944249061691	0.609568181923759	-0.731574026148017	0.464428606480314	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31899497426285	2.33974299973187
Merged-chr12-114991119-1	4.45203324143255	0.159851599103428	0.875722865192209	0.182536742452583	0.85516152238338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43227213747251	2.53556056636986
Merged-chr9-96650142-1	1.8334021492218	0	1.46333827093665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14972623-2	3.19408245274453	1.51251578349518	1.2906489711119	1.1719032962093	0.2412358835417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26309897836414	2.22003889422436
Merged-chr3-145023781-1	1.4965671377684	0	1.52773132928254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6477176-1	3.36262976054367	0	1.5252382117358	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37927285-1	6.11292158784605	0.852495193278683	0.644683910347329	1.32234600491176	0.186052959999927	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05727294735325	3.90765971464223
Merged-chr10-90962510-1	3.12334389446858	2.14083082085261	1.25132216371846	1.71085503232107	0.0871078775036638	0.834966868845293	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	3.42084091143164
Merged-chr13-13523685-1	1.62642508635662	0	1.50118824863483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27230247-2	4.29057193297338	0	1.37594966704983	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106809486-1	1.66484958442059	0	1.4611508492792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117613061-1	1.59056936240033	0	1.56548582492326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132813703-1	2.40016992828427	0	1.42135567030117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105975847-2	3.13669273372151	0	1.41443147433761	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94283441-1	1.36066117501037	0	1.57744526506048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121278108-1	6.79643263590146	-0.420602545016113	0.909863499171483	-0.462269939830658	0.643887753514671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45314352603753	3.53635417565367
Merged-chr13-100198913-1	3.20049111661607	0	1.43485153297825	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38978082-1	1.70268353277053	0	1.48257885574511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121792988-1	4.12052174831518	-0.635895443548446	0.843472760847401	-0.75390157580144	0.45090832431674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83260079823897	2.27105472106687
Merged-chr13-101734452-1	3.45445292990741	0	1.43550758114616	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104373376-1	4.0413490203767	-1.03553442070939	0.85692588639424	-1.20842938362697	0.22688214308129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67167347213525	1.92218463282547
Merged-chr6-22452338-1	2.52937820950108	0	1.45149779483695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87668645-1	1.94953531685791	0	1.45098252880901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99960798-1	1.73690005489735	0	1.6282236236594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59113251-1	1.6568859762421	-1.37414892077003	1.64295442337806	-0.83638894738459	0.402936128424072	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73775798795819	0.577068348605183
Merged-chr11-59527556-1	2.8681333727281	0	1.45558283841484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62397739-1	1.75601570021521	0	1.47223398543072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116824743-2	4.93649955759941	0	1.37788045112484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42897786-1	2.46236977090969	0	1.41889045581541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75836645-1	1.8400431130142	0	1.4787099038285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105533504-1	0.943020461294205	0	1.5802135395929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110978952-1	4.77219902999923	0.273412827475685	0.999459532360512	0.273560678169672	0.784422255852624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27156148143412	2.25187318028509
Merged-chr14-9404410-1	2.66831051907483	-2.89772065946651	2.16670981610065	-1.33738290099291	0.181097682968039	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11218960619615	0.600815099743027
Merged-chr8-108896671-1	1.89714673728694	0	1.51620665089766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5421660-1	2.16984193654189	0	1.46184891890222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58020134-2	4.6390944871375	-1.34775679846469	0.977695956785487	-1.3785029886959	0.168048045743186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12654871298294	2.08894288310984
Merged-chr1-121453900-1	3.32561647898624	1.09385408652612	1.20906428618367	0.904711270546905	0.36561836867481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	2.56119414308632
Merged-chr9-78340463-2	6.26781878071219	-0.245728534344269	0.528050850470678	-0.465350134603968	0.641680737695795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35319894353249	4.1415595606476
Merged-chr14-8092702-2	2.67165897377948	0	1.39793469430954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5418496-2	3.1992719245406	0	1.41488002657337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52646518-2	4.1355095825088	0	1.42281921972795	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73278667-2	3.32406301511614	0	1.4093461913634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54824386-2	3.47013876636569	0	1.37089469028447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79693029-1	5.50196830084922	1.89441986847579	0.680290021815893	2.78472387911708	0.00535733229187493	0.129950569412775	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	3.85721800659448
Merged-chrX-61815084-1	2.63491606455506	0	1.43237207067758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120011622-3	9.16318572316409	0.601823738265051	0.509990718784085	1.18006802104147	0.237973162243145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52133424668802	4.14460577979265
Merged-chr17-71531708-3	7.69941258795752	0.830428310874823	0.568715866408952	1.46018136634451	0.144240235060082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52127498505192	4.45752914476671
Merged-chr2-4864582-2	2.95971074903198	0	1.40740721205976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-43624138-1	2.99739139341558	0	1.38547769221711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122645753-2	3.32948744346887	0	1.38535127696938	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-6152940-2	3.01559835717191	0	1.44064720291422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69037859-1	2.1658688060091	0	1.411446871921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8256601-1	1.752320637494	0	1.47617306681558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139611799-2	7.48388537428871	0.142181882569372	0.772577576283296	0.184035735612957	0.853985420724361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60391341779232	2.7299655255134
Merged-chr8-71960645-1	6.04967201065847	-0.663088362219165	0.668034513138252	-0.992595964996103	0.320906891940892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04743810724652	2.23575728674533
Merged-chr6-31189227-2	3.16833570859453	0	1.37940793731384	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60761772-1	3.54415818942251	0.778285500074099	1.09803326232025	0.708799566262236	0.478448866979366	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81050397723341	2.57652457044436
Merged-chr13-52535753-2	2.50326466816729	0	1.45181285866939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-135797352-2	3.38701916228317	0	1.38574488535604	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127300075-2	8.14174670574302	0.783821410895688	0.576250910456583	1.36020854227309	0.17376394013728	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73855547031609	3.25727577336812
Merged-chr1-172349655-1	5.16193121933586	1.20902008410344	0.709119880009396	1.70495866522233	0.0882021337851705	0.840956693710129	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67261959439934	4.16972709457339
Merged-chr12-26071701-3	8.042171696543	0.335973432517939	0.64033849312136	0.52468098689526	0.599804976738258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62478025404468	4.03993969891094
Merged-chr7-143024504-3	3.67534486905017	-0.880601158939989	1.14518355373677	-0.768960710330287	0.44191663504627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.723581231604105
Merged-chr9-106289057-2	5.25099714524241	0.680650878037939	0.799517153218303	0.851327423430641	0.394587495353439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	2.49442230539954
Merged-chr16-70412492-2	7.10919149969657	-0.945613827967748	0.64041724781618	-1.47655896400712	0.139793898546747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89323344637104	2.50633878546232
Merged-chr13-19430093-2	3.80432609986061	0	1.39834560547265	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111966762-3	5.41964504681864	-1.15911649952571	0.88179490102517	-1.31449671366678	0.188679103296138	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37833055520499	1.338064021838
Merged-chr15-74594237-1	2.09043605711359	0	1.46889085756178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160602012-1	2.02470084054369	0	1.4596400198425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3005932-1	2.95412721121694	0	1.40466749614805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108686984-1	3.90908350099791	-1.89998940330404	1.03402997297508	-1.83746066648092	0.0661419179846705	0.708055947520591	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96006934525357	1.02674429890598
Merged-chr5-80953110-1	2.29745787423541	2.17831776150652	1.42010083115801	1.53391767240234	0.125049907751436	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.08918047352118
Merged-chr9-50447420-1	1.96365596755516	0	1.46651678653642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4842772-1	1.03113135476326	0	1.66286151775814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77865982-1	2.04534355187636	0	1.54957978064767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123334253-1	2.15322138882614	1.61733890468532	1.6068077583956	1.00655407981116	0.314149110992961	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.07828143010348
Merged-chr8-120436471-1	5.36972672692676	0	1.36348919665241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77821514-1	2.22749260564496	0	1.43221516418463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123436956-1	2.18122146446441	0	1.48122697774358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44584517-1	3.72334168169962	0.664636467145219	0.868828602047422	0.764979957587702	0.444283479376365	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8338940823526	1.96407541330571
Merged-chr2-157259916-1	2.03320481306233	0	1.42871543397444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9039774-2	6.51979296119839	0.754768742181934	0.950916272567427	0.793727864330365	0.427353875060963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71403690839733	4.29394558296768
Merged-chr1-161654915-1	1.55490401323205	-0.874416857952481	2.29983387203374	-0.380208704891904	0.70379049803541	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.662147012823607
Merged-chr4-32574714-1	2.86788371606348	0.619967545510977	1.41329411790158	0.43866845383287	0.660901788231669	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr15-87909298-1	1.31027947240556	0	1.80869821821151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107998285-1	1.09336195790709	0	1.56948615199071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85615736-1	1.90123361978324	0	1.42557450026459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101155434-1	3.33995521597527	0	1.40311896742798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100508414-1	2.71394857826746	4.05824020490445	1.12468054640533	3.60834924892698	0.000308151486639893	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.89129336264989
Merged-chr6-17511885-1	2.86644039596441	-1.34418356268402	1.86071989147646	-0.722399738317099	0.470048747750862	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7661131762375	0.948471875794396
Merged-chrX-96196750-1	1.73201897156591	0	1.55814002866432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89634370-1	1.94427341668863	0	1.5985724892469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114258315-1	2.36800217208508	0	1.4418683915139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146697400-1	1.66163370300917	-3.81839679571107	1.65649265315029	-2.30510940597853	0.0211604468415846	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80785104250469	0.413263464506793
Merged-chr18-44761957-1	2.38002494395868	-1.99944922964999	1.64498816970417	-1.21547939764793	0.224183301865914	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	0.41385117919798
Merged-chr2-29119661-2	2.45240538780086	0	1.42313272147022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66261133-1	2.24396388646774	0	1.50426797708577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110499177-1	6.59848347691432	-0.0774009880388409	0.665457871359779	-0.116312378844782	0.907404975301668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84398133817173	3.81237786648258
Merged-chr1-59619606-2	2.70783134529561	0	1.40095206790481	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-93929932-1	4.23372752854072	-1.72333159255681	1.0679474920109	-1.61368569658032	0.10659561800408	0.949068655373767	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88787614081909	1.02748994520012
Merged-chr5-103937700-1	1.95614888645417	0	1.42994992311444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-31227626-1	1.74053195931507	-1.92669910208391	1.48821172443637	-1.29464045367174	0.195444290308666	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr13-63073965-1	5.04840326537426	-1.15570074918072	0.998355795860874	-1.15760408661139	0.247025640808056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43049365066179	1.39949824061849
Merged-chr8-68193588-1	5.23926623764027	-0.0394808448260925	1.02269771650845	-0.0386046083694042	0.969205628085896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0.948471875794396
Merged-chr5-130852274-2	3.84003775298133	0	1.41512841746717	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110523219-1	3.49611922420499	2.75345259347532	1.24276402100487	2.2155876312294	0.0267197567237903	0.393087755277001	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr13-10542912-1	1.63196547923447	0	1.56061016413606	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116377257-1	1.38146783273304	0	1.63152494283149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22818224-1	0.967725675343008	0	1.7524540334152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88588201-1	3.25091582766835	0	1.40373695684751	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47157299-1	2.00206777979967	0	1.55559749347701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59651876-1	1.87716892884048	0	1.50603962619861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148283577-1	0.605018230756239	0	2.03612747215368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117728878-1	2.45518024978288	0.679510653591605	1.07394722864988	0.632722572826837	0.526914826498185	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	1.70266130792036
Merged-chr1-154004172-1	2.05754689793699	0	1.52981653245896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29998262-1	4.70734213749611	-0.574177090529565	0.917500069904273	-0.625806045540107	0.53144216601781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32553483911794	1.48922199005772
Merged-chr17-86435698-1	3.75649389270487	0.714537821495352	0.845748676634238	0.84485833822282	0.39818993789536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68598010415578	2.28521175839365
Merged-chr18-63880603-1	3.45816160179835	1.820125399563	1.3009168250508	1.3991097390042	0.161780077682821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr7-72345638-1	0.500493034145676	0	2.25362543069163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135136690-1	2.98493052628516	0	1.43388158663086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65843253-1	3.86368850176872	-1.77949374637342	1.05537983769863	-1.68611686788881	0.0917732916864837	0.861482423335645	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19779354260537	0.67591700901439
Merged-chr19-9994658-1	5.34166362380678	0.44722171996436	0.645771038844795	0.692539140132987	0.488598814944429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32835432828296	3.76100826386296
Merged-chr14-121641475-1	1.269090309972	0	1.56467708882069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-109552228-1	2.98974090656309	0.482654003313869	1.1044560152457	0.437006088654873	0.662106932410849	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	1.67575558916111
Merged-chr17-15065783-4	3.95275386155548	0	1.36542077116921	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103340447-2	2.71100371921457	0	1.42015245309484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113017830-1	2.6888308290663	0	1.40201502830442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24386652-1	2.45253395472715	0	1.40818259660352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80018699-1	5.09946819742404	3.5035327315827	1.13817898568775	3.07819137028407	0.00208261127605451	0.0643596738800724	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.11378131411959
Merged-chr4-148681726-2	8.68731527003244	-0.2984935705838	0.602695625624217	-0.495264206164841	0.620413633706716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26639201760376	4.04331688813316
Merged-chr8-86900014-1	4.33677819857475	-0.577828891356264	0.776514383590169	-0.744131600865789	0.456796863068998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12140019351026	2.51291579941804
Merged-chr2-155811933-2	3.38758047111932	0	1.46318303621192	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97526304-2	4.79016513373045	-4.19103039104569	1.1599674423745	-3.61305864108262	0.000302606232753459	0.0147263851443556	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32500372216053	0
Merged-chr1-88258054-1	3.42440101028032	0	1.46650076099073	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120170985-1	2.59838974936991	0	1.45395539483053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139437682-1	1.69396441928917	0	1.51775777023547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33098047-1	2.1760029081905	0	1.4462445269273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43495547-2	3.10132781534067	0	1.37942907116766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35711994-1	3.6619755616518	2.98535135152416	1.21276083013008	2.46161590756847	0.0138312698656861	0.252894045956552	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.75107117680423
Merged-chr11-74469117-1	2.72453781682975	0	1.42832309163065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25291356-2	4.21840729252085	-2.49934259189447	1.2090197812879	-2.0672470629323	0.0387108796074226	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	0.376242425970964
Merged-chr13-37504144-2	7.52405334527401	-0.223402644501935	0.637786373088847	-0.350278171388296	0.726129945557177	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86784155411463	3.33975947427437
Merged-chrX-129777519-2	2.38854950294626	0	1.46611721583479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90515241-2	3.31563960963046	0	1.39862437408311	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102370228-1	1.81867752329272	0	1.57368643033283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17808784-3	3.81397624196922	0	1.38018244620787	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46858326-3	8.95764613727351	0	1.34688512632269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106628540-1	5.56341467480453	1.78665906080674	0.827946479566322	2.15794028346204	0.0309324749810301	0.431033315502255	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.95920413511128
Merged-chr8-11575730-2	3.90064262343324	0	1.37518802160682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19300375-1	5.24015250466889	-0.0420566163806365	0.833351197479327	-0.0504668577999851	0.959750359380598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30406722002565	2.2492526918421
Merged-chr8-39648657-1	2.12259903577558	0	1.4824410826277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-103782460-1	1.71902527078429	2.13930168829053	1.44962392745445	1.47576322918949	0.140007465177872	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	2.08700524084536
Merged-chr18-12347531-1	0.721281094622982	0	1.82686558916428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82795826-1	1.71942666269209	1.63873903888898	1.39395190893294	1.17560658182492	0.239752124197549	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.43811874863432
Merged-chr1-136707586-1	3.10895661461517	0	1.43956156051898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75907635-1	1.44225284118094	0	1.58117407236299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110986895-1	2.15252852737048	0	1.48022349054094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152781296-1	1.67804509100898	0	1.53080013230982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54577068-1	1.9244181338268	0	1.45805559881235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-104504262-1	4.05803082290355	1.70170034430134	1.07315763262767	1.58569467575295	0.112808587537035	0.979719955967469	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.58922372983786
Merged-chr18-38422549-2	2.76749341485307	0	1.40347738536739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128851308-1	3.00617054254353	0.618292684164845	1.43024629898922	0.432298048666025	0.665524805216963	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr10-78439780-1	2.28880723874137	0	1.4483537818858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-81493378-1	1.7661062353603	0	1.42133734662187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34795859-1	3.70602827525579	-0.539585949605817	0.92008452913151	-0.586452583998065	0.557571416426316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52449471409698	2.50514783228644
Merged-chr12-32989899-1	3.46815575686772	0.409221698264065	1.00310949979587	0.407953167971532	0.683308057602348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38233238432098	2.11318657531541
Merged-chr18-11552194-1	1.41363486800769	-0.671563188688362	1.57713643094839	-0.425811727831643	0.670245040473416	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr4-46356012-1	1.18484629228041	0	1.69735740495194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167360259-1	1.78269209512465	0	1.46051924281186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97523950-2	4.81394869352031	0	1.35935768705466	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93523838-2	3.73625788480122	0.292929311235682	1.14420489444772	0.25601123772248	0.797942159971602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	1.97764512755407
Merged-chr17-35094963-2	6.95050560757288	0.00453655537135195	0.698383012644828	0.0064957985649904	0.994817139063749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05009251732765	3.23466946014457
Merged-chr15-63960739-1	1.71494521925168	0	1.52207318985355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80157887-1	2.4816898361155	0	1.50765404913843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39006932-2	1.90207211543247	0	1.60095357320208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110503007-1	2.38914885381958	0	1.45168493141939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55594157-1	2.08290462069383	0	1.61553813445978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39498059-1	3.38308703998491	-1.32842615678346	1.14230591720227	-1.16293379626103	0.244856364071522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	0.723581231604105
Merged-chr11-79519138-1	4.00781485257893	1.1239588430767	1.25421962293149	0.896141969497867	0.370176944203875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.13341594473881
Merged-chr18-61113001-1	2.35852665754161	0	1.44727274752349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16193325-1	3.14049199642105	3.60627112607141	1.26104846461042	2.85974030917639	0.00423988048753956	0.109388050337126	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	3.63968587787992
Merged-chr16-23351830-1	1.55552161717847	0	1.65869533217977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-56943963-1	1.03613923823057	0	1.77302456791665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-70756060-1	2.85357291210653	0	1.42500077989199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-10105408-1	1.57819919878079	0	1.49622450701329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56748042-1	2.52381087890174	1.9691836307158	1.27088761623594	1.5494553614017	0.12127229425857	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.54921910733135
Merged-chr7-45107218-1	1.73642701624692	0	1.62298960220672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134071092-1	2.07400749905416	0	1.60537274360607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95653128-1	3.67365017329312	0	1.40193587602956	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108295586-1	1.45513084052714	0	1.48096946785829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5840124-1	2.59728228832704	0	1.45982742080449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63794231-2	2.42772433730624	0	1.42502347562157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25056932-1	4.07756208665261	0.94000464694707	1.4334622222064	0.655758228145145	0.511979697125993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.577068348605183
Merged-chr11-78114876-1	2.35374060952393	0	1.44177899006144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151690233-1	1.89627493390982	0	1.46077299904605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-106279615-1	2.61160008507294	-1.17232614621554	1.18727035083566	-0.987412972445915	0.323440227413053	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61972779591675	1.71608239041532
Merged-chr1-44042359-3	3.86489093205864	0	1.37378963500113	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75152566-2	3.68391436548668	0.50562571558582	0.872396489724789	0.579582473727431	0.562196214854339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	1.75829733652102
Merged-chr16-57535000-1	1.44972121660219	0	1.5086452413179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125542824-1	3.21792083228986	-1.55314770251296	0.958528395310447	-1.62034605350416	0.105157961245541	0.940945879462677	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52597312980084	1.19124681800816
Merged-chr8-41004325-2	9.74380205385317	0.656480117248563	0.549493660182788	1.19470007539338	0.232204232998847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82306402453052	4.4999044904001
Merged-chr2-33227477-2	3.2786392871223	0	1.45884778299529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118802846-1	2.47732760368897	0	1.43296457593798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-4227223-1	2.33019436333544	0.216658173585314	1.50199057241224	0.14424735918106	0.885305144745034	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.984484304269093	1.25502116749499
Merged-chr19-34843186-1	5.41415311478327	-0.979748435589575	0.779546051958982	-1.25681918743285	0.208819116498493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24380199352959	2.62616322869683
Merged-chr16-24685200-1	2.52781658722543	0	1.41167446238041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-33986723-1	1.76216131916903	0	1.48809256800006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47305263-1	3.16683241754207	1.17275355978226	1.06525432181296	1.10091415333227	0.270934021553231	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.48988962528534
Merged-chr16-72142384-1	3.65467342125857	0.89412759502466	1.12085660859366	0.797718091832034	0.425034102556813	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80122427565032	2.31535462851072
Merged-chr5-92128760-3	4.78956484007678	1.1269751469403	1.03456656419379	1.08932106057238	0.276012328591219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.66683653681755
Merged-chr6-83495299-1	2.58541633366654	3.50201280511812	1.27281711753185	2.75138726285277	0.00593434422061939	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.67656321522231
Merged-chr16-36660436-1	2.13535160911289	0	1.42738484201984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69663665-2	3.19040457611294	0	1.41805737974162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122555838-3	5.99202191979811	0.278944286296721	0.650907040108457	0.428547041448871	0.668252892626882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96945729934465	2.67397940148119
Merged-chr17-35751729-3	12.4787407967409	0.0993917246918983	0.460037578338409	0.216051317048679	0.828947746817663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89947696849815	4.76880045523178
Merged-chr19-17347427-1	5.61624855141111	-0.0150972942656036	0.603260573702277	-0.0250261577231043	0.980034099294057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35228908326008	3.28819009542295
Merged-chr6-49057918-2	7.07369746860483	-0.0896502597946695	0.837778826295172	-0.107009459992109	0.914781474862863	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43282905033915	1.61881475415901
Merged-chr16-3236066-1	2.73507312104819	0	1.45269186648111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40636215-2	7.64682511100111	0.55479339807441	0.661505130620563	0.838683439316568	0.401646973916655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4851130237326	2.97689722364521
Merged-chr12-12249185-2	4.39043897551505	3.09635471213443	1.0986490834821	2.8183291268225	0.00482742980341763	0.12020808826568	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	3.27897376767141
Merged-chr15-86137859-1	5.33641477844002	-1.7447308659746	0.939509241619813	-1.85706620933978	0.0633017349388226	0.689444802552486	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86668191370119	1.45526469271556
Merged-chr1-138328026-1	2.56482145015306	0	1.39836636930023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-95741514-1	2.72812287857448	0	1.42574853686162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136396908-2	2.63383559980076	0	1.3970057640206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143584143-2	3.06434122724064	0	1.41996515504139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101333913-1	2.19074969784068	0	1.43727552816142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-42169952-1	1.7517273913681	0	1.51729240445961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87006630-1	2.28356717995853	0	1.40779807963139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-63111017-1	1.98614865297826	0	1.57328165977766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121266783-1	1.53392507575066	0	1.4735176105161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88419587-2	2.8934458714919	0	1.48529597986753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110934852-1	1.67272326463177	0	1.55238978474406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38602968-2	1.79951516480816	0	1.66502813512682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5968641-2	4.97074615338257	-1.4597287525042	1.1220728569599	-1.30092154306194	0.193285311259625	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51789747318134	0.878778741524029
Merged-chr15-97941499-3	3.12611573799035	0	1.40616401633755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27031306-2	5.31634839926689	-0.845428833879493	0.769257351975765	-1.09901950460153	0.271759558401856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0666632008033	2.57812733526085
Merged-chr16-32978748-2	6.28004245901773	-0.14417313521652	0.857196141713687	-0.168191535403196	0.866432599857226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77796484182175	1.76197067039868
Merged-chr17-26230498-2	6.56457508009705	-0.00161250989156973	0.727154301709185	-0.00221756219798123	0.998230642809771	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17483815307227	3.57374258110675
Merged-chr7-122196908-2	3.16696156384286	0	1.39812200133217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-69854077-4	3.36608938198735	0	1.38412729565217	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62369331-3	3.37311056875094	0	1.40641007981582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-87043438-3	5.46975437855825	1.2790252691051	0.931943240331101	1.3724282915027	0.169930147858126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	1.96344525659293
Merged-chr8-35162393-3	5.96691590932331	-0.267870737976243	0.887709763880636	-0.301754862766454	0.762838942043257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05629245276768	1.25163494309627
Merged-chr15-41639084-2	2.73029226892872	0	1.40833362799322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103110169-2	3.84861077675894	0	1.374962751684	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67905764-2	7.01150513156588	-0.131178319563016	0.701472035328415	-0.187004346511976	0.851657225041339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87074934681929	3.30912524180517
Merged-chr16-50373854-1	2.83116614023801	0	1.41773399529726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10355763-1	1.31521786629329	0	1.49011251106348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94010453-1	4.71026388974954	-1.49081490616975	0.839956542664415	-1.77487147304163	0.0759191115327529	0.769367446645957	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09785647535321	1.38572824442771
Merged-chr5-21267277-1	1.95697309544855	0	1.44038405952983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91651686-1	2.43747925947088	0	1.45603139938509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172409167-1	1.60031690566371	0	1.81151656065748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122174251-1	1.11015389764071	0	1.76253514142452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105006975-1	1.74970634771692	0	1.51805525901533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5928551-1	2.99628019480122	0	1.46743217741915	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80197653-2	2.57217108531381	0	1.40699480805707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111302135-1	2.49101464701243	0	1.47881547699132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73342349-1	2.77170071038955	0.932289399113749	1.4057862247957	0.663180064415011	0.507215237741298	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	2.28167437843862
Merged-chr5-43892573-1	1.72625186914572	0	1.44932531879923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139229356-1	1.72579520202475	0	1.55855248848902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136916348-1	1.95637066374022	0	1.50624652012185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182554141-1	1.99087819265011	0	1.49256000149855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38197421-1	2.00843873319608	0	1.48765388635554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3077226-1	2.01164582576416	0	1.50738071708607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25100395-3	11.3181446275336	-0.479290668093872	0.441185941138786	-1.08636886038737	0.27731583269508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3200595222997	3.78114349317621
Merged-chr18-12661336-1	2.34191153604781	0	1.45695328382321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108224825-1	2.58540517129061	0	1.42244837092673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91925350-1	1.21898171248228	0	1.49194197903006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-117981251-1	1.88089369142079	0	1.43888190259134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17632002-1	2.14492483348854	0	1.46479185014249	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142360976-1	2.09238874834876	0	1.40638068383128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94945833-1	4.19232042427181	-0.00857046926731515	1.03093944341127	-0.00831326158106471	0.993367053335483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08385898871549	3.50687457852016
Merged-chr4-141635305-1	3.34970924851157	0.431392694623007	1.17316149449269	0.367718081993098	0.713083456329683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56357026808963	2.6640051938108
Merged-chr16-17583233-1	1.73648779501614	0	1.50579999103323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159910645-1	1.73584143861632	0	1.52444280284209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45086378-1	2.9757637492211	0	1.41058986543899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110442439-1	1.25282513744688	0	1.54173262465834	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135459760-1	2.91859017183659	0	1.42998538367939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84656383-1	2.08637835786996	0	1.42106931162657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125292786-1	3.91749097469492	-0.167108080487398	0.874849596870861	-0.191013496588563	0.848515019097251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30670691456252	2.02099185162662
Merged-chr8-95131459-1	1.42474875160449	0	1.53235051758888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148115713-1	2.13737096278687	-1.24113967883562	1.23512995389824	-1.00486566204505	0.314961540876082	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15931113490288	1.98728899046489
Merged-chr1-138995225-1	4.48455836971728	0	1.40075385566035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41828795-1	1.62212609420608	0	1.66249274618627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58791918-1	1.67146524853699	0	1.53611551225779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-47944864-1	1.8164050301914	0	1.49868086921892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3508593-1	2.99703902484819	0	1.49408476059655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57704953-1	2.26819457498488	0	1.42742630958031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25285178-1	4.07038861899955	0.962583793401053	0.917752631127264	1.0488488518074	0.294247689443067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44027592657175	2.38280079617353
Merged-chr6-53958560-1	1.78021281403769	0	1.46512400607262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129333697-2	3.81349874627185	1.30573697826609	1.12306172516284	1.16265824843845	0.244968187662822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.5608848804954
Merged-chr16-11697907-1	2.22137204958706	0	1.43230481322923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45096226-1	1.51176529116219	0	1.42189704406004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55835007-1	2.70070589289232	0	1.42753406178776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-30885340-1	1.38528209269404	0.620246242160579	1.83765680062148	0.337520173489858	0.735724807186196	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.32509503823899
Merged-chr13-60748557-1	1.31141660011179	0	1.6923647645431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-86537084-1	3.78939137301734	-0.702588002371535	1.08958669285999	-0.644820652615857	0.519043416594549	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17577111586528	2.32141208096419
Merged-chr9-32544897-1	2.02181584981598	0	1.40962069605871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116815501-1	2.80716551823228	0	1.42760438925188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64301491-1	1.98449050865533	0	1.49022925001588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49201960-1	1.88459990815582	0	1.47248081529137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-84813929-1	1.86676323623747	0	1.39958418984632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81199024-2	2.90343932396795	-0.0290938866505824	1.23804872367731	-0.02349979132014	0.981251604942333	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13344196072648	2.11968543096308
Merged-chr1-88263614-1	3.51567777173225	0	1.45020742975505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62310006-1	1.33157739278414	0	2.44358065587747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123558675-1	3.17015445290608	1.78797269595391	1.34591648271164	1.32844252887939	0.184031957641876	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr11-94468387-1	2.13045621597514	0	1.52405945634025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51082422-1	4.68452613577524	2.50836853758497	1.21668878453424	2.06163529200706	0.0392424713861407	0.501099718599771	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.62582308765031
Merged-chr12-46761552-1	4.30304560431882	0.985173797684442	1.55426697264088	0.633851079014126	0.526178014629945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4885037243069	2.93596053942487
Merged-chr5-150107716-1	3.59977309634693	-0.487746247947848	1.08220466259937	-0.450696864284727	0.652208042666193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.18909650862134
Merged-chr4-59529469-1	1.52783190011854	0	1.51838852687666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30027393-1	2.72799054790022	0.382911789720158	1.40392264933681	0.272744221272475	0.785049839278994	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22017310661124	1.98169183227544
Merged-chr10-108446298-1	5.2574113125128	0.169681237817075	0.889040035542581	0.190858938893025	0.848636110758198	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67980964805931	3.54182670684111
Merged-chr8-10026395-2	2.72976337622031	0	1.471789538784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89270004-1	1.21418784940181	0	1.68534824060197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23534892-2	3.09524746647198	-1.05345750228794	0.948960546777398	-1.11011728134053	0.266948491330993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96384058082504	1.41478649953382
Merged-chr2-119296999-1	2.41831661015323	-1.79512913838882	1.33386202957823	-1.34581320899918	0.178362764421102	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.303163067301871
Merged-chr9-74142074-1	1.67872253794996	0	1.54868210510881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84645612-1	2.97817472852311	0	1.38635742815348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51636997-1	2.15137680583885	0	1.49644189692601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76699573-1	2.50626024838482	-0.86924295127187	1.1915258766791	-0.729520833986868	0.465683128357307	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54439169879985	2.27857590116594
Merged-chr2-27412536-2	2.67543715305636	0	1.46659591243258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32399709-2	2.83162597506382	0	1.46055281251917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26687774-3	3.57796306704237	0	1.42102258742035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-80073072-3	7.14421605784267	0.722229485853164	0.673808239719767	1.07186205700532	0.283781994747329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	2.44713883199797
Merged-chr1-33684667-2	3.3388627757719	1.09758359933646	1.06913746438533	1.02660662066266	0.30460573524738	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.79065725465852
Merged-chr15-78330095-1	2.42697142676961	0	1.4501759779239	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113544883-1	2.43144883056739	0	1.45806377248302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143962347-1	2.07296446433094	0	1.48557154387243	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45241281-1	2.02914855524965	0	1.39735618426111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25045045-3	9.9494091487869	0.952326367678104	0.599865620782401	1.58756617263045	0.112384472523745	0.977287706293294	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57112482656511	4.49357237220634
Merged-chr15-80563471-1	3.93406321716831	0.820477435233763	0.977250090404913	0.839577753217508	0.401145177048915	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.79102892550478
Merged-chr13-77166233-1	5.73319362439293	-0.270211359109302	0.62367352504571	-0.433257703362505	0.664827562347515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1243342386103	2.55220257845092
Merged-chr19-56817956-1	2.23522313861648	0	1.41190876879225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14846239-1	2.32422384421738	0	1.46968620879954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28460759-2	3.00334496960453	0	1.39995365478006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28479377-1	1.42113399462571	0	1.55785802274607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91962471-2	4.48146854274857	-0.552745132644481	1.26097615649872	-0.438347013776419	0.661134750197685	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	0.465515277017237
Merged-chr2-147178969-1	6.77026021146342	-0.163031938072678	0.726286458334167	-0.224473327571897	0.822389018899547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63104184463262	3.5030791837936
Merged-chr18-88798696-1	1.64680446430441	0	1.50619078504608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-11807629-2	2.86952371291084	0	1.44769443344934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-129766631-1	0.900333805674347	0	1.72936390935588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60757172-2	3.04033699027503	0	1.4047875389607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145196725-1	3.82712573198834	-0.377141799817052	1.12869614662156	-0.334139352691087	0.738274405772945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69641995825753	1.6454950719498
Merged-chr1-135789969-1	2.55723859673	0	1.39678702668863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72312329-1	7.48253808540719	-0.872253899888687	0.768504212385083	-1.13500210647072	0.256374435784425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73686052530036	2.1304360554358
Merged-chr10-121693257-1	2.42494513954969	0	1.43317461525621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154939225-4	7.93599438282594	0.694422968065986	0.815399677932428	0.851635077691964	0.394416664294191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51134589925281	2.67610254165243
Merged-chr9-62374538-3	4.01215227310383	0	1.38991390530214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114348520-3	2.95876018376456	0	1.46109063899437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128570579-1	4.23008901129232	-0.412680957601639	0.897370982865052	-0.459877760125546	0.645603964375626	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7863683906487	1.46460328489499
Merged-chr2-166758011-3	3.60322663982994	0	1.4518750786612	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7810156-2	2.30313740142728	0	1.4578075416097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32976685-2	6.55602248286673	-0.319483005141045	0.693527604114155	-0.460663718712569	0.645039888850087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49051861592046	2.60597302237263
Merged-chr10-44470522-2	2.96479843233262	0	1.41838919533414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70107609-2	4.78220002462227	0	1.3982080053605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127526874-2	9.98371577908529	1.65763407281815	0.657712108806091	2.52030341333864	0.0117253714352357	0.224392130175798	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67167347213525	4.59641480756387
Merged-chr15-80219952-1	2.9916385954842	2.54562566185292	1.2257891237823	2.07672397516314	0.0378270424777279	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.887876939341704
Merged-chr10-93118652-1	1.7567849050425	1.7654511844008	1.53202137227549	1.15236720345396	0.249170211980889	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr12-102420626-1	1.49626383665835	0	1.54817320508559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16396146-1	1.73522163314338	0	1.48516750904944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95261326-1	1.86569442791528	0	1.48048231786743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6279281-1	5.69593354164727	-1.7806217159999	1.01987133272314	-1.74592780370196	0.08082349784654	0.799251322437706	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67164797246412	1.22885557123518
Merged-chr3-37173431-1	1.31051311607313	0	1.81579672897434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82240347-1	2.16919741113663	0	1.43923473368322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52112465-1	1.71618046284547	0	1.53354861609334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27667416-2	2.95156922939854	0	1.41918486518776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69658399-2	4.12375331194499	-1.48170695643345	1.097835495885	-1.34966209599463	0.177124395935684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6342703608096	0.903978167044898
Merged-chr14-63967718-1	2.5524727287122	0	1.42121322470508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98294375-1	1.8713198293747	0	1.42467581442939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68233622-1	3.67707538136422	-1.57696999150705	1.27217095736103	-1.23958968123144	0.215127199235266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.303163067301871
Merged-chr4-141657862-1	6.00055718612845	-0.322353923441867	1.01088422982627	-0.318883126208495	0.749815140214712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.14448592098483	2.85325801548683
Merged-chr5-117127275-1	2.87771080241915	0.0383905484701563	1.37233118962151	0.0279746964584726	0.97768233254751	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.55634759613363
Merged-chr15-102506614-1	2.00850120270052	0	1.43316189156944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128780441-1	1.86162122836072	0	1.47685595910313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46961968-1	1.84187237204517	0	1.4271008036566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25555995-1	2.03877442912161	0	1.51437536706054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82157022-1	1.71113852856529	0	1.50328187188901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31068515-2	4.67621634428611	0.0917984192195665	0.728182630844517	0.126065104180118	0.899680389878777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91136621420107	2.95665468563208
Merged-chr15-66101676-1	1.30079190088068	0	1.59546189072727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69443478-1	2.34525015818246	0	1.49689912725645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35996009-1	3.53413619753923	0	1.40787157120643	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8459602-1	1.40151570334304	0	1.7380765976268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73678167-1	1.54234650321508	0	1.49014109937407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79982247-1	2.16116530266821	0	1.47047666585189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103393274-1	1.55015610684115	0	1.68168656315475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47460823-1	3.61052477796741	-2.67927276393842	1.08670089500641	-2.46551077324973	0.0136818060753835	0.250667103623785	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74451593490824	0.724326877898254
Merged-chr11-116102632-2	2.38795336879257	0	1.4003270828294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68318106-1	2.60608772750587	0	1.40858190999054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32351513-1	1.61441521240144	0	1.55872641235605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99416950-1	0.893678224410365	0	1.79301600364248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34664985-1	3.69454296472025	-0.0405189119673981	1.02656236668731	-0.0394704825369273	0.968515286693997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.94927122251658
Merged-chr8-88257339-1	1.86855827810031	0	1.61989711096547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82983343-1	2.65495876022265	2.75096003251573	1.1834842268765	2.32445855216522	0.0201009305340812	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.78689065574085
Merged-chr9-118691516-1	1.13434496597374	0	1.5893589573157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58274867-1	3.16809587378672	-2.53849531635555	1.02827373891617	-2.46869604880816	0.0135606347738973	0.24903464380888	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40787210367514	1.06702908365212
Merged-chr5-90743671-1	1.71600316574425	0	1.4848094681086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75182660-1	2.89338465624801	0	1.38451973044865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76828186-1	2.13744100795174	-1.02466577040647	1.4435937654815	-0.709802019728662	0.47782691644698	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0.600815099743027
Merged-chr7-81666744-1	4.23035613514042	1.56699754691416	0.861486216388476	1.81894674239053	0.0689195556600075	0.725202889299719	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68598010415578	3.31133139029613
Merged-chr7-24386029-1	3.27877703380094	-1.06142009223319	1.12947377070536	-0.939747446786947	0.347347121353043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9272926343824	1.02186287315087
Merged-chr14-58076311-1	1.33304538136794	0	1.48506516212368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-131886693-1	2.78379106707278	-0.387516700475014	1.12478631039812	-0.344524730513347	0.730451700858003	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	1.27673210875742
Merged-chr1-172012199-1	2.29259708351239	0.259373125682058	1.21342868137528	0.213752262216258	0.830740253719258	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.97908007631626
Merged-chr8-35132384-1	3.24502934940906	2.9340672078871	1.07069042114227	2.74035066528089	0.00613736650242675	0.142573799805992	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	3.31411435039587
Merged-chr15-12092280-1	2.24399852385462	0	1.43465507588929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86486954-1	1.48838131808786	0	1.51958580605527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92699743-1	4.51575664410474	1.10891697296332	0.940069329157184	1.17961190581286	0.238154605496842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67709642602482	2.93684785619477
Merged-chr4-6386857-1	1.46910947547086	0	1.45363879613007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88263088-1	2.44127607472512	0	1.48308257976099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61775839-1	1.80507359684533	0	1.5048781145314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138506831-1	1.80381064334604	0	1.42538569143454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-42934980-1	1.54095657146857	0	1.5963186559992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15622535-1	1.39474210500864	0	1.73328690057916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-26812273-1	1.66229688723018	0	1.54097259750412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133146177-2	2.93930172881428	0	1.42356573205309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51956043-1	3.23566763526592	0	1.39706463735857	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28525085-1	2.44447451820643	0	1.44347539568953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-147307864-1	1.71162965468066	0	1.48740541987545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16884889-1	1.81248455131052	2.84271563387185	1.72535762511602	1.64760951149516	0.0994328273598833	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	2.07706571524354
Merged-chr3-97294887-3	3.70696192158411	0	1.38578507375083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75132701-4	8.84486545229132	0.2668207078348	0.561727153107121	0.475000552063249	0.634786579791344	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56992588308836	3.81947277755027
Merged-chr6-72990198-3	8.47367466101811	-2.47177715264948	1.17885445438292	-2.0967619399151	0.0360146543331392	0.475492124377258	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0
Merged-chr10-12956016-2	3.21298150042331	0	1.47554822122933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117081992-2	2.41015760782313	0	1.39201938780672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124959585-2	7.18962075897434	0.182793937327042	0.76189726138901	0.239919404610789	0.81039273743254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	1.93939140359756
Merged-chr5-64506348-1	3.41151790259877	0	1.36481797172734	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37837506-1	3.25825486658192	0	1.40905297639109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5800965-1	2.54661753838532	0	1.43113071126321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21712075-2	2.1119856031847	0	1.41502705194741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51077665-2	5.81357752689256	1.08681234176755	0.78792503182949	1.37933470554181	0.167791580761071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93390680814056	3.30085144834262
Merged-chr7-55909091-2	12.1562130568522	-0.102698014101581	0.509136466743274	-0.201710191294085	0.840143294866586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.57847277355767	4.75987375853937
Merged-chr3-107706163-2	4.40628378003501	1.46507122625202	1.22763278136682	1.19341161989895	0.232708206395395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.97908007631626
Merged-chr3-104795807-2	2.11671717536007	0	1.42869053287377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107094235-1	4.37014295059858	-1.08359486186093	1.32475941956258	-0.817955959293135	0.413382335291488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.303163067301871
Merged-chr8-85560839-1	3.44134253799809	0.307447632502777	1.20342549425425	0.255477081024695	0.798354643113238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.02674429890598
Merged-chr3-96764719-1	2.66605522553748	0	1.39596697877238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4354553-1	3.51746485938504	-0.0352756998744831	1.34624610960454	-0.0262030097044035	0.979095415311014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr1-163964207-2	3.50914395641631	0	1.45831589450585	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155019469-2	3.41875413304651	0	1.37717204525353	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13469477-1	1.87381189275049	0	1.46042723332919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-47013470-2	4.68265431651407	0	1.38088545317833	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-92419684-1	3.1496877318883	-0.504545848991271	0.95728623243099	-0.527058503400803	0.598152962258017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75225060332627	2.48334602300605
Merged-chr2-103661837-1	2.10918244443088	0	1.58203317116406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84442598-1	6.0723362224064	-0.0368883321910663	0.740796323925287	-0.0497955119372145	0.96028534320342	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03824771725394	2.4657467976946
Merged-chr11-69516950-1	2.52779874076791	0	1.47005068833931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169271523-1	2.93705875884931	0.546343351333192	1.82804839445055	0.298867006470802	0.765041522181182	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21793092431211	2.76484616003473
Merged-chr4-101202818-1	1.33868025191196	0	1.63729618455598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31064958-1	5.39542178637115	-0.831337088805653	0.740060064948459	-1.12333731838854	0.261294260117269	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56376965164983	1.88148957377491
Merged-chr7-132658113-1	1.54243979760167	0	1.60732237092528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52760339-1	1.29009599013781	0	1.48966444522144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5206268-1	2.99625354784171	0	1.45413728991955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrY-90738459-1	2.76448987168444	0	1.45382484398639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122063989-1	1.86092290535394	-1.69703816683632	1.45069644949875	-1.16980927844876	0.242077728923537	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31387409893957	1.06702908365212
Merged-chr17-24458645-1	2.31358162823219	1.87327625287905	2.2395737608075	0.836443204354931	0.402905615687437	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	2.20214051740963
Merged-chr1-88005196-2	1.9521033381096	0	1.47394048243555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-78036756-1	3.32533117249748	0.171424115677715	1.11242479577295	0.154099509763808	0.877531274815322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23242628517872	3.23135100814083
Merged-chr10-30772459-1	1.32141556455698	0	1.62044280381391	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88993228-1	4.28400851063431	0.681577275175669	0.927158432836204	0.735124926913198	0.462263414601537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00353870693411	2.90837143481854
Merged-chr5-143441976-1	1.81718128585305	0	1.47254535146574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156306036-1	4.85198388311401	1.14474723789767	1.13733961222928	1.0065131167408	0.314168805202155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.17788344834821
Merged-chrX-153666938-1	1.40748261034258	0	1.48372068181603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-45780624-1	2.71041876504029	-1.29334478933606	1.27814768973272	-1.01188994020442	0.311590679732742	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86445479434711	1.71273550799308
Merged-chr17-32412080-1	1.98096881963608	0	1.44579408698943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-48930786-1	4.59032314416046	-0.635257982223401	1.06851669823091	-0.594523214541398	0.55216222018057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1968315444006	3.48391806433028
Merged-chr17-25127828-1	4.00479591449678	0.561865499407997	1.14792954406233	0.489459917043034	0.624516125452859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9635581111928	3.17569623409986
Merged-chr7-136798802-1	1.35054227251619	0	1.46502698353737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125089530-1	2.77488973588213	-0.376334947959243	1.21460850989477	-0.309840532890592	0.756682226548333	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35486793061388	1.51226750748471
Merged-chr19-34724823-2	4.89251501764706	0.467503690341758	0.881030329208452	0.53063291335473	0.595673183149836	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17540470129796	2.36567157793324
Merged-chr10-127569658-3	4.11885912122642	0	1.37815112337314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124757259-1	4.60207999457723	-2.18449555772602	0.99711686151232	-2.19081197204188	0.0284654019065097	0.409785694448083	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35639097229334	1.32471430176536
Merged-chr2-102956984-1	0.909953763019336	0	2.03450392304205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77880566-1	2.26734836652162	0	1.42468112874245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20045789-1	3.58916183482183	0.968261542060636	0.782118560802409	1.23799841940492	0.215716646899594	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49065419848114	3.29296620811231
Merged-chr12-84848095-1	1.84887089064433	0	1.46710751687087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102392590-2	3.27715682370916	0	1.42269208224908	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76747574-1	3.58565991216647	0.0502967111446291	1.12981492105556	0.0445176552436023	0.964491779078548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64054795287913	1.70863195646908
Merged-chr18-46378246-1	1.68646625300241	0	1.59303979179639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-74231233-1	2.08708861735518	0	1.46495710647742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156859502-1	2.8852450388035	1.10799909620447	1.21445447671335	0.912343045745957	0.361588161012272	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	1.55716820277606
Merged-chr3-126830448-1	3.12740383483144	1.71637819149074	1.09773428032449	1.56356435455708	0.117919911429656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	2.28733524435458
Merged-chr10-87906492-1	0.887001988492691	0	1.68109124976798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44339964-1	1.90778090305415	-1.01328607511623	1.47130831096132	-0.68869730944031	0.491013769707699	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	0.969611060640422
Merged-chr12-114405696-1	2.44745030204862	-2.22481388517895	1.2682886416189	-1.75418576826415	0.0793986810133461	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71360995174771	1.55469575053842
Merged-chr6-135088044-1	2.52518595309038	-1.91373884160021	1.35967547529805	-1.40749677137532	0.159280133954796	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr9-105694922-1	2.43067331637614	-3.43970109470373	1.12997387553332	-3.0440536451166	0.00233413514665253	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.89890368343436	0.67591700901439
Merged-chrX-135753000-1	2.87529686921179	0	1.41293119171524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163589424-1	1.48707626884569	0	1.72864619637702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86810927-1	2.0605379480987	0	1.41197440356575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-45566702-2	3.11203343638393	0	1.42477304195303	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36983589-1	2.73520367639977	-1.28196646097864	1.4361783635345	-0.89262343280514	0.372058866075788	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.41385117919798
Merged-chr8-14938738-1	2.25930052095729	0	1.46933826054568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-133171499-1	2.96278608833871	0.278407837266525	0.998495200558489	0.278827416607314	0.780377273116628	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76863173449358	2.30417511455525
Merged-chr11-90019305-1	4.31847332630016	-0.272802803198839	0.895510904049902	-0.304633703470391	0.760645147688162	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78026204928873	2.01960854862221
Merged-chr11-50206732-1	2.59243052723149	0	1.49469116839606	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130477703-1	3.78761384016562	-3.47531451488022	1.24682923135444	-2.78732197440138	0.00531456461741758	0.129143682627717	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56027264827292	0.303163067301871
Merged-chr8-128302535-1	1.46293642875207	0	1.53676986814546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38455783-1	1.90010966447659	0	1.58099951307067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84779209-1	1.56782398738404	0	1.47626509189164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49199708-1	1.86768308250188	0	1.53636752189264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128188591-1	2.95443447230787	0	1.46672620797537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119138147-1	1.50447544083291	0	1.65343097542566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32563486-1	1.36395534280012	0	1.49659594926694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14468201-1	1.01523065734983	0	1.79149455673174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26428875-1	4.2637438642919	-0.584685511706877	1.06664495739718	-0.548153823493079	0.583586285734451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82904660410885	2.74195774089446
Merged-chr9-31253502-1	2.73552688008122	0	1.44975317490753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5811168-1	2.41831635152826	-2.19302399633158	1.31655878835069	-1.66572432293652	0.095768335139131	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0
Merged-chr19-29827762-1	2.35058938567317	0	1.46156197385635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51939267-1	1.54081777378148	0	1.48401563859716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23965878-1	6.34213360821306	-1.08849388545199	0.657779144428244	-1.65480145527893	0.0979647787030039	0.899386489700488	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95358949276495	2.89261677842155
Merged-chr6-37390491-2	2.27634206306413	0	1.42625923684145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88283884-3	5.01932423597979	0	1.3729311561925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-33995431-3	3.10203181064701	0	1.4287110652865	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24036869-3	6.97394355873671	1.50066490988572	1.10193661203267	1.36184322537169	0.173247366806353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.20253745507858
Merged-chr11-52343378-2	2.61949973207639	0	1.43414190652608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137964480-1	5.10016032926569	-0.24884680922901	0.621651534487299	-0.40029951737229	0.688935923387791	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04002873292877	2.71758638912992
Merged-chr7-90134527-1	4.24752144666645	-0.767782870133441	1.05957454833519	-0.724614300465962	0.4686886833463	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57581642672581	2.0616452534421
Merged-chr10-13830811-3	9.88431329550592	-0.051706561371308	0.483539146134656	-0.106933558088612	0.914841690312529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48208527249175	4.36384238068314
Merged-chr4-139217250-1	4.29216188653313	-0.731272234007832	0.924268802619449	-0.791190000068541	0.428833126023745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34310688897156	1.5608848804954
Merged-chr3-69670390-2	5.75223968161207	0.160811184673347	0.923249287261722	0.174179592545691	0.861724323167489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19664257419518	1.25298535761957
Merged-chr6-122304487-2	9.21215710230315	-0.0931602993709328	0.627490588180866	-0.148464855291312	0.881975919958075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00109926763133	3.55524287991296
Merged-chr4-121007462-1	7.12631626603691	0.361316351920354	0.629551148676607	0.573926920282625	0.566017255251077	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41871435521197	3.80331628821817
Merged-chr9-108068023-1	2.1051870568947	0	1.39554151141446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120078273-2	3.02911785709235	0	1.39523528759071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54192166-2	2.10311899587545	0	1.47336252402798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110271915-3	3.8932396879274	0	1.38923287408749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36122414-1	1.97917147756244	0	1.44829001564014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109238351-2	4.71490569226269	0.838147992989815	0.986605868277378	0.849526665043284	0.395588299109932	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.96387513136329
Merged-chr19-6950898-2	3.51018852765401	0	1.38324443671025	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-95739493-2	1.70811190435813	0	1.58199924135959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78635481-1	3.17709852170051	0	1.39434527189706	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143922084-2	2.14729670123199	0	1.58118622984173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24797288-1	4.73212710799946	-0.69572996498773	0.868632759444331	-0.800948337975179	0.423161554621361	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69347364329618	2.22185921586889
Merged-chr16-75617761-2	2.72092276395859	0	1.41939152407356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85879391-3	6.26666671617298	-5.07276928506183	1.05629287405524	-4.80242687389041	1.56754073086559e-06	0.000186047918316862	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69741207223285	0
Merged-chr18-62122115-2	3.33453249431715	0	1.37443989751868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52785255-3	4.01792810533718	0	1.42080242784525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189662089-1	2.82132008291649	0	1.41799775412909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105282881-1	2.4241181195574	3.0645527983855	1.2200069136677	2.51191428839738	0.0120078249254845	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.75648227519025
Merged-chr1-132521003-1	5.60487639390718	0.160723211556425	0.933842132213785	0.1721096168315	0.863351352443673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.25298535761957
Merged-chr16-94503315-2	2.91174921171925	0	1.40329348721944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88613826-1	5.93106834867775	0.3347973339785	0.701715967136058	0.477112321307042	0.633282141291918	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20458646825563	2.98058841101479
Merged-chr17-35658019-1	4.13737605585424	-0.0706399210921673	0.911436863830178	-0.0775039104687006	0.93822268052907	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90914733968265	3.15072845593055
Merged-chr15-93310329-1	3.07451309000775	0	1.42735642797533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133182491-1	4.46994685820886	0.686235160871903	1.03885880348174	0.660566343156534	0.508890459238856	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65627011367592	3.11797492392068
Merged-chr2-105334563-1	1.12224846801326	0	1.66777748709995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8116026-1	3.15118488978337	0.428653226242592	1.24684168120793	0.343791222817732	0.731003301527858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.838451940269823
Merged-chr4-124645864-1	1.3236227753999	0	1.48251257590746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-18327188-1	2.14100797196232	0	1.458948566634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134081834-1	2.9963180928532	0.0522398109723104	1.15871836113147	0.0450841315065545	0.964040249784509	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.25560888218618
Merged-chr14-94583472-1	4.23276986922099	-1.04594545970391	1.03518075044799	-1.01039886923252	0.312304229410306	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.24367727501313	2.34747963354244
Merged-chr9-77732270-2	7.04039128331483	0.502656807697818	0.826074257105968	0.608488647810917	0.542863432889397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65326585997348	2.06695797389053
Merged-chr10-70173403-1	1.85591744119559	0	1.44897435477125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101298611-1	1.47393033023543	0	1.56962956664857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83543848-1	6.51891732451341	0.180592400622879	0.781040981159506	0.231220134383701	0.817143788801823	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06371186908045	3.70284506686058
Merged-chr2-148719773-1	1.51358282050889	0	1.79149755581816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99974104-1	2.67403560906398	0	1.39741751557416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-41888567-1	1.52333551720004	0	1.58089041029693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173488793-1	2.95410571358041	1.15774174840002	1.38689627942931	0.834771688100868	0.403846269463706	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.00114351279961
Merged-chr13-105039862-1	1.13217542605048	0	2.32148156843675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-119052561-1	1.35568255215826	0.191176827880576	1.53278966478439	0.124724763137979	0.900741452331066	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.67591700901439
Merged-chr2-69778859-1	2.1668561161957	0	1.42659154179683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62069610-1	1.42520273552146	0	1.70306383536627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36540706-3	9.32779581707191	0.707988908504492	0.646534905037168	1.09505133131798	0.273494148768237	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62225931102252	3.51690327836596
Merged-chr16-17881038-1	1.3796900344255	0	1.51196584127999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84642149-1	4.24364401146493	-0.197594536049582	0.95200891125157	-0.207555342932465	0.835576176112294	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35526103100457	1.61028830508622
Merged-chr14-118816765-1	1.56828805788265	0	1.45050486456397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31019651-1	2.29075965846907	0	1.44266913955733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33561570-1	5.06456716993526	-0.238180210654665	0.810460464688457	-0.29388257790739	0.768847631381195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26831209299546	2.44842511420741
Merged-chr19-41987198-2	2.64700586332735	0	1.40328421181543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33945151-1	1.33501315896035	0	1.57232889658625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-71931150-1	1.98804883200475	2.68447370455216	1.66350779640541	1.61374278518737	0.106583229407827	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.09024780741436
Merged-chr7-123487907-1	1.39742837362116	0	1.63512185989953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29991000-1	3.05006269937356	0	1.42413748436897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28076136-1	1.52314812566325	0	1.48515679047611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-98056840-1	1.746155422635	0	1.43641286646363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55817633-1	1.70690211012406	0	1.52784236761329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-33994394-1	1.72545498834969	0	1.48866500436403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55341740-1	1.57196068676893	0	1.62970839041109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125419022-2	2.60818281204316	0	1.45922532813787	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134124484-2	1.77930743447369	-0.0346251596360547	1.5672496336974	-0.0220929447942305	0.98237381434262	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.41385117919798
Merged-chr13-89890388-1	3.19850181111501	-0.327736034987318	0.990343798713966	-0.330931576905825	0.740696169635593	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81768618332269	1.66683653681755
Merged-chr2-51073296-1	1.75746632013044	0	1.54623462675048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156438892-1	2.37749731849398	-2.50564494541395	2.11825440435067	-1.18288197124369	0.236855927719208	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54601773443274	0.55634759613363
Merged-chr7-100230780-1	1.739349202017	0	1.5405457899741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40303650-2	1.8526532838254	0	1.46629218180069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5561390-1	1.60494895053631	0	1.43526562665609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3346762-1	2.50478313355577	0	1.42203088969727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100661443-1	1.70073895228776	0	1.62593648836862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71224712-1	4.07090985961767	-0.709900620507553	1.22639635407577	-0.578850889558087	0.562689789906292	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0.67591700901439
Merged-chr3-109438280-1	2.54386177018382	0.313340877089564	1.1964551704439	0.261891030128033	0.793405455257183	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	1.33443165855834
Merged-chr8-72584456-1	1.65905991485021	0	1.57033517783319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92326055-1	2.00045380119181	0	1.42277533360123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47776051-1	2.06704466915966	0	1.44004735320529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47006208-1	2.52939095643699	1.35065548183147	1.31392822642374	1.02795225391246	0.303972287743628	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64290788048512	1.96711747616013
Merged-chr6-56860387-1	1.32486699584332	0	1.58025990921631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17359489-1	1.8835615076639	0	1.58699313587146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54921164-2	4.56470897718432	0	1.38976481812794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64934051-2	6.48797480298934	0.40723413686906	0.911157191330243	0.446941692107505	0.654917160184531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56586581096048	1.90221032624646
Merged-chr12-111912066-2	4.44808333769362	0	1.38406436530106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43887579-1	2.33787619547997	0	1.40321389862749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70323479-1	1.91156028071895	0	1.45294383891614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128805520-1	2.55182110335194	0	1.44201114363184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99132766-1	5.88738754333865	-1.56473612900861	0.859744505249768	-1.82000131370893	0.0687588048318213	0.724385518981224	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3629993673302	1.75107117680423
Merged-chr8-69328889-2	8.73504526629501	-0.239652310704972	0.626191900367803	-0.382713846289307	0.701931946852012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07750501953412	3.01542984968492
Merged-chr8-72000589-2	6.91204508622235	0.712717397785559	0.771165422230489	0.924208188334123	0.355377933195896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00353870693411	3.43656601894745
Merged-chr4-142153704-2	3.30519135670651	1.83577026600176	1.38371276783207	1.32669894264107	0.184608290886078	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr19-38015405-2	7.37354245783394	-0.503917080541189	0.696173288550942	-0.723838574143045	0.469164844545419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72587442728265	2.29171792859976
Merged-chr9-40753438-2	4.62032705260714	-0.153551811520208	0.914887460800067	-0.167836830320013	0.866711647059713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82152469709249	3.74475908932992
Merged-chr4-26444008-1	2.48547746144469	-1.29379510419484	1.22393025880708	-1.057082374494	0.290473994485508	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0.601513806634888
Merged-chr5-139024071-2	3.81981649898088	0	1.39032246593114	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32281469-2	2.78661249593336	0	1.4365339950638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68407061-2	2.08649489300452	0	1.46984626494407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114750266-3	3.25625858028613	0	1.38953023959431	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96267822-1	2.25308913447801	0	1.40181590294238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45330580-1	3.86179952560146	0.960392502363542	1.30575246917179	0.735508854118954	0.462029649646224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.02748994520012
Merged-chr17-42885475-1	4.27149570529343	1.799060667411	0.905542704112805	1.98672095665948	0.0469533281419201	0.565585335203497	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8763281121661	3.65940879311314
Merged-chr4-40680577-4	3.5396956650864	0	1.40448761162236	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21605464-1	1.40136457679904	0	1.62568821613874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17625279-1	2.32830098543993	0	1.41211086678515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-50962775-1	1.1361915421088	0	1.59793533787431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128841061-1	2.55799318581836	0	1.46660164870021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123335676-1	3.0391262386491	2.54113251242749	1.24428930634615	2.04223607762853	0.0411281193867175	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.5459422068545
Merged-chr17-13306057-1	2.08335139392453	0	1.50186015324291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166081787-1	5.04413801122364	0.848933641438744	0.604135615700362	1.40520376448025	0.159960695060514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21887332954444	4.22964858399282
Merged-chr12-44273613-1	2.18738219963972	0	1.43952504961151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97540387-1	2.0649971676273	0	1.42603750553995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55231393-1	1.60764415879498	0	1.49270304578704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115647547-1	1.69292665582829	0	1.55046773827758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40357373-1	1.59425964671369	0	1.62533276914169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-14812408-1	1.74439424362615	0	1.50388412359785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62873568-1	3.49158339542412	0.362316101797806	0.953504182925779	0.379983757057108	0.703957472451417	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.92822012848219
Merged-chr9-45677689-1	1.42687772754795	0	1.51188956286882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7438474-1	2.6542922840928	0	1.41486401203602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47384790-1	3.64667694559839	0.550084868291028	1.22655073528852	0.44848113695161	0.653805996674421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20724342340814	1.41398715281163
Merged-chr18-62171637-1	1.44882980504718	0	1.85409443251201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45088473-1	1.85740746521491	0	1.51355726614195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78855114-1	1.02199325980458	-3.55807197457407	2.41907814422061	-1.47083796489775	0.141334942568465	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92839347452618	0
Merged-chr10-95780464-1	2.24345444824949	0	1.41938368456383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107685452-1	1.76748917914413	0	1.52253772414652	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34742850-1	2.29938244300646	0	1.40467995117947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101828279-1	2.37019563358945	0	1.40880514768429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87017094-1	1.88299257123479	0	1.50942633211862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143616745-1	3.85695024445575	0.620434393112249	1.40851416851085	0.440488570852079	0.659583288270939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr19-47697301-1	2.63251472484315	-1.88666052718184	1.28535669029751	-1.46781087415132	0.142155602862206	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22017310661124	0.67591700901439
Merged-chr18-36508594-1	1.38954108822959	0	1.78307406566086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-66051406-1	1.09133661352178	3.72422876591021	2.00912860330563	1.85365374808896	0.0637887127654218	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.83300142924273
Merged-chr7-31035494-1	4.5318752319842	0.227737989461025	0.871390712703708	0.261350030635983	0.793822587927307	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47035004228861	2.92428835866023
Merged-chr3-138752216-1	1.88695089353757	-1.37284630902525	1.43268484390177	-0.958233288269069	0.337945134947902	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.55634759613363
Merged-chr15-36505677-1	2.97763721043382	0	1.39795995530142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-34664221-1	1.11443216292156	0	1.66695065260102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47212333-1	1.75349937954739	0	1.44110280869316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21106329-2	1.96418824834843	0	1.53294474294309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-8734980-1	1.09502890022346	0	1.50430719950694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16463432-1	2.56637990034184	0	1.40890027272278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36997287-1	2.83496356907906	0	1.4104499364823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21094412-1	2.06425260776593	0	1.47872708707473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91191527-1	2.01652440334541	0	1.41298187258716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77784595-1	1.11087988631959	0	1.70391363735203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-36882653-1	1.70489757920408	0	1.5593972677175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-81536335-1	1.85692228589684	0	1.52353581279097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91133517-1	2.51416861215697	0	1.41060938469551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155153027-1	1.84629474316436	0	1.47234578075871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-53485872-1	2.77637731111569	0.0200663299424081	1.37873173551726	0.0145541945727969	0.988387842813611	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	0.724326877898254
Merged-chr11-70803363-1	4.57668888045939	-0.384072057299376	0.861893546464786	-0.44561426277609	0.655875906097064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26276386882201	1.99358654727727
Merged-chr7-75753641-1	1.77868420673615	0	1.42817611190623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64764632-1	2.00566675949159	0	1.42767158632712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52935474-1	1.36318437734738	0	1.59499118625928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34796498-1	2.56643263138518	-0.405065516793984	1.22323040664974	-0.331144087485041	0.740535651425577	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	1.18984215491549
Merged-chr2-34954533-1	1.49660245698661	0	1.77039975376523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75676029-1	1.68066396279035	0	1.52090105232625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90546404-1	3.78623755133562	0.351729510822888	1.179099005645	0.298303627718254	0.765471435748112	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.948471875794396
Merged-chr16-87405192-1	2.33833661569409	0	1.46373507649731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108599924-1	2.51003858026986	0	1.42971145275407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34067155-1	3.65825668906094	-0.0678806079147155	1.12797729608275	-0.0601790551551454	0.952013027041082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66752446303997	2.94992919171632
Merged-chr16-4914297-1	1.67363814372565	0	1.53313522545063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67945776-2	1.87454686755586	0	1.58537485627134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76429622-1	2.36187045291984	0	1.44421146562356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129517914-1	4.32567115295268	-3.83743486768849	1.10044157575861	-3.48717728612087	0.000488147651585681	0.0210931782134706	C57BL6J_F1_Control-BALBCJ_F1_Control	3.230157798079	0.716426531808663
Merged-chr10-122008427-1	2.67887532360956	0	1.44276874024465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77602732-1	2.28384691108702	0	1.38704780832913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24825903-1	2.26928285542787	0	1.46319681793638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14634211-1	4.4843443794622	0.781263414754103	1.27347051207315	0.613491562896298	0.539551359817691	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.662147012823607
Merged-chr19-25607446-1	1.22806946417461	0	1.6048375822646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78238228-1	5.04302990989128	0	1.36325815910432	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-11720705-1	1.73447283794847	0	1.74549645902312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31731088-1	2.07217480819159	0	1.47474669994872	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66108207-2	4.57088439090269	-0.0405769497651933	0.972930261941344	-0.0417059180420884	0.966733136152455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86728154592049	1.84249433723732
Merged-chr3-122372158-1	5.18939467045818	1.25236297204817	0.979487675332542	1.27858982158503	0.201041536118955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45651939465293	3.52838746783004
Merged-chr3-69117412-2	2.6958453693876	0	1.39008656413972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96411051-1	1.66356492419649	2.37507872224145	1.5487988795947	1.53349718516259	0.125153399672498	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.18984215491549
Merged-chr11-77100289-1	1.37107332040344	0	1.50062779900024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88702453-1	1.01735767479275	0	1.63809864372812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-48421668-1	2.37042492458339	2.95167695383757	1.25751457530958	2.34723080892397	0.0189135344689099	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.7793972549831
Merged-chr9-71126457-1	3.8708102205592	-3.10512706574859	0.990713275343042	-3.13423383236024	0.00172303491367368	0.0551604563441623	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04001297099366	0.67591700901439
Merged-chr8-120821517-2	3.53456455324162	0	1.37388018585492	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98554571-1	0.76154881870216	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65188763-1	2.28141132473014	0	1.42088421784262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139640407-1	2.75946999272743	-2.55267463643376	1.41073652932291	-1.80946235060556	0.070379204147251	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49953561829606	0.303163067301871
Merged-chr7-82517695-1	2.63214875199376	-4.24481236004697	1.54363742291598	-2.74987655587436	0.00596177194496291	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98534683639965	0.303163067301871
Merged-chr15-76552880-1	2.27888481101658	0	1.41003008972544	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67041411-1	2.73248388659808	0	1.41960802173079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110941738-2	3.26158606071219	0	1.43806769524745	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-151851353-2	2.96955812762303	0	1.37993408681382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85849299-2	3.82748596441086	0	1.39127508323709	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150316724-2	3.10068858837588	0	1.3905803710853	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71155608-2	2.92827834597914	0	1.43843001115452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103982418-4	4.09276280937737	0	1.37428057717892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10355758-1	2.47978827186587	0	1.40245294277076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30364846-1	3.00690931396221	0	1.43364377134175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135639973-1	2.83229937227292	0	1.40243094916262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65830579-1	3.73157282709581	2.73848696663313	1.30433923383046	2.09952050479307	0.0357710422143438	0.474610223024045	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.02640015751263
Merged-chr9-32520933-1	1.77117521703672	0	1.46453369541783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45534980-1	1.63946604988101	0	1.56754331231722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16220391-2	2.7081409725919	0	1.42265765376139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19029468-1	3.08610793286344	0	1.40999061140513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64749502-2	2.80042291958605	0	1.42463226969191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138209608-2	4.992826154267	0.592864116965373	0.764948071860887	0.775038383354721	0.43831697909483	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79805567306807	3.25333113181312
Merged-chr2-58919914-1	2.50293232158851	0	1.46214374210199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78710178-2	3.23307517259002	0	1.40757849186655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10432337-1	2.29342732450435	0	1.43876943582728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13651916-2	2.82251413731114	0	1.40355321496153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-29693921-2	2.29051255616042	2.41155287854756	1.44448093503854	1.66949443225654	0.0950194328938673	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.788686275880602
Merged-chr12-17641423-1	6.40239706367111	0.806015783540811	0.730268788339991	1.10372481531493	0.269712527635919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	1.8849368839153
Merged-chr5-135984875-1	3.10095572678796	-1.47809471715017	1.24549686632716	-1.18675105262121	0.235325831036905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97271257483112	0.97019877533161
Merged-chr5-135768122-1	2.77661517804484	0.683379166113422	1.11022731324048	0.615530853874245	0.538204199761576	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	1.97731223551783
Merged-chr16-57634380-2	7.14931122137141	0.113368336478212	0.628212812362946	0.180461675163534	0.856790139197161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44199095680198	3.01091647595868
Merged-chrX-73999440-3	3.9481385179865	0	1.37514118024749	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35074075-2	5.02896235628824	1.1267387214404	0.840138472737762	1.34113453674927	0.179876775875066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60903826052448	3.93126874093582
Merged-chr4-125099638-2	3.56735840462265	0	1.38624113225729	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51262575-3	7.99834324784417	1.91610977864402	0.757480992405543	2.52958133320152	0.0114198702737702	0.219838640779659	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	3.96365793507841
Merged-chr4-133451771-4	8.45752612270589	0.829117578802111	0.53672951001971	1.54475869748929	0.122404641064706	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37834876224864	4.4201908521401
Merged-chr3-18613543-1	1.99083683458107	0	1.48758134045487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78370487-1	2.0888122918944	0	1.50270804001779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115564744-1	1.86338820780596	0	1.42493193723347	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133469283-1	5.43563351591004	-1.07918156648879	0.800667449624397	-1.34785242861446	0.177705851191196	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8441881967244	1.66624882212637
Merged-chr5-64625008-3	7.35929734072302	0.0569367262806862	0.665469707212389	0.0855587048720679	0.9318172267713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77281609072416	2.82459263935618
Merged-chr13-119613291-2	3.4087083276726	0	1.56072273070708	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131983121-3	3.57248633867995	0	1.38964294068356	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35808421-3	8.17238768800311	-0.591112366329155	0.660936402044061	-0.894355893397666	0.37113150340666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71802922847114	2.33790538321195
Merged-chr16-58017004-3	5.45989259341353	-1.99315684541638	0.929644994024812	-2.14399782522056	0.0320330610408017	0.441055006361941	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81761847333937	0.662147012823607
Merged-chr19-24990155-2	4.24327418836743	-2.79504507437371	1.07131813155355	-2.60897766223795	0.0090813170198825	0.188201033886311	C57BL6J_F1_Control-BALBCJ_F1_Control	2.80585648675534	0.465515277017237
Merged-chr11-60703309-2	3.11380464658436	0	1.40282343328137	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65522801-1	1.33602372224277	0	1.70264023626292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46484269-1	2.55420714184787	0	1.46431090088644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122906758-1	2.48456087425534	1.28103401860957	1.45381843280996	0.881151311401086	0.37823592797753	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr14-46743721-1	3.87075730200626	0.173013626560631	1.06926769567485	0.161805717371305	0.871458850565703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37152543765538	2.12021133680407
Merged-chr2-130781195-2	4.73327589883298	-3.90923290657598	1.1584227024501	-3.37461696693946	0.000739184958614126	0.0284974150108548	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37232581226066	0
Merged-chr19-57571950-1	2.39151357039231	1.01683844706257	1.1030264020529	0.921862291936157	0.35660041025211	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	2.02497645810754
Merged-chr13-45444172-1	1.98796412390044	0	1.43943625177328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85840529-2	3.33848645171599	0	1.40310412281266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111036382-1	1.21238248331756	0	1.56766939782076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-69125479-1	1.41924752960403	0	1.50956983639253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93588277-1	1.93017201548195	0	1.50090441901791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-74631509-1	2.961225021771	-1.54181392837629	1.00473261894213	-1.53455148096977	0.124894038462187	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41815827989418	2.03470522223771
Merged-chr5-64338593-1	6.43289132845634	-0.56780895642159	0.676988893094882	-0.838727137495312	0.401622446248524	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.20548984313901	3.71429780391779
Merged-chr8-94528340-1	3.57274041914814	0	1.38946542564271	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79390570-1	4.68854104908171	-0.00524388332717367	0.868231703649375	-0.00603972799557128	0.995181023578925	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0438339302262	1.90518160452002
Merged-chr8-72330512-1	4.00695053590274	0.547681121991004	0.967811085231253	0.565896723388056	0.571463989117146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63732062367281	2.97817781506986
Merged-chr17-24244040-1	4.03781184768454	-0.172350446937042	1.01957563763333	-0.169041354633685	0.865764113143086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83149254898828	1.82822317669445
Merged-chr11-84073043-1	1.20798488160413	0	1.56932686699062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95777395-3	5.56267934292489	1.06280945586973	0.923980421351945	1.15025105652634	0.250040482912446	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57612722179308	2.14031122916015
Merged-chr11-84613245-1	2.08381412291092	0	1.46126504876827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89601597-1	2.07062188675366	0	1.45272437901578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-31910622-1	1.74092274090867	0	1.44695533142797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5735222-1	1.52619333648749	0	1.53113953692105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36152137-1	2.83899060208217	0	1.44355472206821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-112133371-2	3.8308083837189	0.997855210715579	1.05834393265735	0.942845874507081	0.345759743198378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84883647187319	3.075703609792
Merged-chr17-10727893-1	0.862630056954431	0	1.63326548054335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35054022-1	3.43514103128428	-0.886413714699382	0.912061719749489	-0.971879090532216	0.331110703132442	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10828732516377	1.52554022439958
Merged-chr2-117994729-1	4.4945325861585	1.17086057870151	1.1098289330559	1.0549919395934	0.291429011197246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69461614433468	2.89740646273362
Merged-chr4-85443517-1	2.78386200457455	-2.3250702415833	2.15873718433092	-1.07705109193454	0.281457440992546	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.44597835587314	0.41385117919798
Merged-chr15-50784272-1	2.01660651762914	0	1.45173528703321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25594105-1	1.96983204340256	0	1.48616385501755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51615345-1	1.96751081204996	0	1.48434804172595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102925121-1	4.1898012884273	0.743966996470476	0.988188672190138	0.752859264032657	0.451534489357083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.90221032624646
Merged-chr3-9714186-1	1.83067017461275	0	1.50385748541802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55333758-1	2.86330294274973	0	1.43208045162984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118052459-1	2.50265308053873	-0.783905676608643	1.08481786241102	-0.722615015636269	0.46991644045114	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	1.06872581468896
Merged-chr11-77795345-1	0.912636206118291	0	1.77847335059665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105963255-1	5.03315412083589	0.777945152471772	0.741016748761643	1.0498347760315	0.293794083420289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07749816846053	4.0891408009559
Merged-chr14-60520422-1	3.20480058158499	-0.839203852033687	1.42472747508671	-0.589027632798765	0.555842737077733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	0.67591700901439
Merged-chr13-23702377-1	4.30493107622703	-0.537353099112917	0.971159472568202	-0.553310876628637	0.580050554501099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60978507060531	1.4068548238317
Merged-chr11-116409204-1	3.18017128870125	0	1.42174457520385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55795918-1	2.16952809061271	0	1.45874154795665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25692477-1	1.88622415752083	0	1.4449170550775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-66131410-1	2.24340071943306	0	1.4699405791846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115288386-3	3.38400982483939	0	1.41036480176453	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84617105-1	1.34932741476448	0	1.5098937071186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75761273-1	2.29847518883436	0	1.39948204970283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38393757-1	2.42711300419807	0	1.4023124464728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105804075-1	0.531280409485518	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-70092885-1	1.3374047596342	0	1.60013296760465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122828283-1	1.53295276210968	0	1.50349858790472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63897363-1	1.88412189893089	0	1.52191924893097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53419786-1	1.88164572879674	0	1.44484805220689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100583038-2	2.75635613979632	0	1.42851613041963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141578550-1	1.72976380194055	0	1.60617398214495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45751604-1	1.75402450614066	0	1.65662579648309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33977608-1	2.23508491298106	3.48994681502285	1.33643211458058	2.61139101413927	0.0090174724962849	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.42163209497338
Merged-chr2-11490125-1	1.94317334951671	0	1.52527119590116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106495820-1	5.40758553738311	1.16733603660505	0.942384740113924	1.23870430718554	0.215455023024036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	1.71947978671142
Merged-chr14-51939059-1	2.99624832273589	-0.153089467869817	1.48177932076194	-0.103314620284414	0.917713272403654	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	1.79973735522865
Merged-chr4-54794044-2	3.91161413236139	-0.344989678842154	0.97695251284153	-0.353128401132547	0.723992181706766	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	1.92503739729973
Merged-chr5-137510702-1	2.17340102213981	0	1.42205211266869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90045789-1	1.9634800301448	0	1.46561652336956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51737151-1	1.28529412786889	0	1.60757237534036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140078903-1	2.88716528569688	0	1.38694503520363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35997832-1	2.19618369085994	0	1.52288205257993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137880562-1	2.70761542221351	1.03933277149041	1.23348509080211	0.84259856826851	0.399452992090904	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	1.8314473603367
Merged-chr1-39505936-1	1.30656189303006	0	1.55518455655117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98608301-1	2.17874375786661	0	1.46321415139506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83685498-2	5.96929862336941	1.54864671162229	1.08518374242133	1.42708248482129	0.153556120461134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	1.20253745507858
Merged-chr1-75467756-3	3.08500165570331	0	1.40923149071162	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166651869-3	3.83239925452172	0	1.39370353356403	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36811608-2	2.78388230974887	0	1.39692021851407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8877955-2	5.78042829378128	-0.365638184591421	0.928016101233154	-0.393999828349485	0.693581165963982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58086425897587	2.68667628878806
Merged-chr2-115780785-1	4.34010476706276	1.26225150110271	1.0659859513184	1.18411645063574	0.236366968985416	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.73556682010248
Merged-chr5-21514960-2	2.40933034215776	0	1.42895642467063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54755556-1	5.31872829607228	1.25556256498697	0.720179927949008	1.74340121997384	0.0812635553577664	0.801589923988448	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12279016980941	3.75088642502963
Merged-chr5-89860416-3	5.62745405350939	-1.98523455865586	1.19537519309797	-1.66076272129327	0.0967611109130197	0.892253982717699	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11779166918352	0.41385117919798
Merged-chr5-143033105-3	2.80448938170351	0	1.44638356803699	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83288776-1	1.58739971177624	0	1.45302463000463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191609740-1	3.13933851654123	0.612747702256899	1.48429193186744	0.412821554238308	0.679737358323018	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr13-81439527-3	3.46739316743691	0	1.39112041155954	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41314891-3	8.34741327560648	-0.309533409345281	0.677528187720697	-0.45685687319755	0.647773923914175	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27086235209841	3.55437702996095
Merged-chr10-44600384-2	3.39165990502914	0	1.40347126199659	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24871445-2	7.11587721109789	-0.185767390103096	0.659872414177299	-0.281520163764844	0.778311464744639	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78846936301897	3.0274023517036
Merged-chr11-116146854-2	5.72882819612515	-0.322693072372302	0.950401257451569	-0.339533507392004	0.734207859381627	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12752229043697	1.50002110661909
Merged-chr2-119106788-2	3.27954100874605	-0.512138862982203	1.30906516192887	-0.391224881599921	0.695631018184488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.465515277017237
Merged-chr4-21679213-1	1.2584004845529	0	1.50617480667255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83994382-1	2.90308702330888	0.40997166862812	1.23009452551807	0.333284686764585	0.738919397459466	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.09982365757507
Merged-chr12-24471157-2	3.59351909850702	0	1.48744994409731	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30196842-2	3.24155629157394	0	1.39285203858477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-46701706-1	1.86884740252743	0	1.41923538176847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69034093-2	2.65903274380324	0	1.41956027055528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60584639-2	6.22479126621242	-0.270062146783555	0.735210018462257	-0.36732653255788	0.713375465176003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31260716574699	1.67656321522231
Merged-chr13-77005819-1	4.74700040347487	-1.30976393887437	0.866340360482879	-1.51183530009423	0.130575766747697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45761277317717	1.45451904642141
Merged-chr19-11824167-1	3.81513841731185	0.878167477083677	0.964942307723695	0.910072519418575	0.362784266038547	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	2.59127241500312
Merged-chr5-21676141-2	2.98453723251088	0	1.38792010310154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68823402-2	3.07999041166724	0	1.43654333901344	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57305800-3	3.46575739530758	0	1.41914781150588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93990483-1	2.78577883900184	0	1.45813591883277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-34035001-1	1.94061349366182	0	1.50260779647633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70783419-2	3.490923554456	0	1.38496724279508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76051396-1	2.93962883713916	0	1.38941948469516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-22384077-2	3.47769220306102	0	1.422271731486	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115441617-2	5.63227998781265	0.202214383498827	0.800668221137434	0.252557024445857	0.800610543044328	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51665517716335	2.46719259992701
Merged-chr11-31675621-3	9.1422675378147	0.564328042583817	0.527909829559885	1.06898566949264	0.285076126805436	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26687776948885	4.02712620915276
Merged-chr11-78896950-1	1.55599116207314	0	1.49774702735443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-18696407-1	3.13243385419782	0.977465071597565	1.34433569567301	0.727098949126854	0.467165342464618	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0.815775955292901
Merged-chr13-59798549-1	2.03271883537381	0	1.43471690189908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92205457-1	1.12789756326211	0	1.60441214075653	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104676887-1	5.36468102023156	-0.301040770151314	0.737639082369991	-0.40811391010369	0.683190048190903	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75127545182166	2.97896998079456
Merged-chr15-81094121-2	3.2929211207775	1.18551197354206	1.41874416635541	0.835606589021267	0.403376260742828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr15-62383017-1	2.92974769858939	0	1.40796446897856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38145671-1	3.37574149204491	0	1.41554613808135	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91330244-1	3.17228276671288	-1.35584932974092	1.43394449189148	-0.94553822509019	0.344384165295389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr6-145129656-1	3.07833620720353	0.902787814433264	0.868166337680437	1.03987885183999	0.298396188917144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96353301543917	2.46117257496106
Merged-chr11-8625496-1	1.06161086013372	0	1.63234699525334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-60905404-1	2.53031113342447	-0.737974622220098	1.0057404846557	-0.733762470020021	0.463093517549362	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73718963476356	2.36925341530489
Merged-chr11-21033057-1	3.21152072168408	0	1.40318424727588	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70135895-1	2.1767954683403	0	1.44122675465121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123984209-1	2.98787852013479	1.20056209126294	1.37937375093563	0.870367505868943	0.384099598451443	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.67279875369265
Merged-chr14-73472470-1	1.56749405909415	0	1.71170980275105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80671932-2	2.76531173957943	0	1.43119320279992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156424393-1	2.74512579465782	-0.768457201170641	1.17507010296224	-0.653967111607583	0.513132994593296	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08636273705548	1.98766066131115
Merged-chr14-121358570-1	1.52535543214808	0	1.6767348876489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76275097-1	1.36738497908641	1.24018424225842	1.76290578378205	0.703488668349472	0.481751266132228	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr11-31550887-1	3.36421654235053	2.31610392585958	1.35990460080731	1.70313706158845	0.0885424216292948	0.842773156600742	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.0754104773304
Merged-chr16-91076402-1	1.89368270689835	0	1.44371115251832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15530422-1	1.93156382609496	0	1.49092815400845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-91957335-1	1.51618239841162	-0.336183877233736	1.46857631380006	-0.228918221051675	0.818932478224511	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.577068348605183
Merged-chr3-89796924-1	3.4329075961677	0	1.3863138405732	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126952911-1	2.35401121352178	0	1.42898559503471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132017823-1	2.2615727992624	0	1.43793750082061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9433041-1	2.11831238569514	0	1.45032242168293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129980864-1	4.16083858072947	-1.55190209887035	1.22071773583358	-1.27130298292145	0.203620881568491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64434011795774	1.54921910733135
Merged-chr12-80146664-1	2.63813262892134	0	1.42193578650678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127587393-1	1.84915206356331	1.85317111175454	1.48513886867097	1.24780998655898	0.212100650614318	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr6-48642980-1	1.70436213893917	0	1.51405685265397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56947660-2	3.36598663051331	0	1.39952936532048	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123322323-1	1.88986537937281	0	1.45203142045187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3347322-1	3.01659187647807	0	1.423948010903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116390877-1	1.26085374239064	0	1.86328213906059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33918866-1	0.86518600599345	0	1.59040190240778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109041052-1	1.24243571522139	0	1.75653176795888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113491109-1	2.93639128981765	0	1.41380622637138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34256449-1	4.06445238227106	0.48791610783078	1.04492454621294	0.466939081485935	0.640543463178528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84614572455902	2.17220560247962
Merged-chr1-152934142-1	2.52201751720841	0	1.41167640251867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-24333166-2	1.78528536601463	0	1.45632771888666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9629395-1	3.05123755301506	0	1.40458145415191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78383622-2	2.87053586657138	0	1.48498983245327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165976609-1	2.90356904836235	-0.941937221064728	1.28355641337904	-0.733849491340256	0.4630404733144	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58756080918295	0.67591700901439
Merged-chr19-9052097-1	1.57437362565696	0	1.59679268766863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52913002-1	1.99313120034801	0	1.42342738928756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99097524-1	2.80920003063561	0	1.37565957928256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23728679-1	4.95613817554661	0.164248729343319	0.711444792551751	0.230866443978323	0.817418560375437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34479755881966	3.46376108164071
Merged-chr6-125436881-2	2.28611064963432	0	1.4564759823959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95705417-1	3.78812602455896	2.81284131947955	1.03570805140708	2.71586313890107	0.00661032380222312	0.149534162116124	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	4.17491644590749
Merged-chr10-94317928-2	2.59650705008623	0	1.39705226753751	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140112080-1	2.23355330189221	0	1.48289027203709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20078618-2	2.5899781895864	0	1.53700901792268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97098814-1	3.2406214921018	0	1.38813952589429	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17973598-2	3.26457109067465	0	1.39209539199704	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167650296-1	1.2166784953362	0	1.56413230663474	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122110112-1	2.50486521341481	-1.56702301389054	1.23582551383689	-1.26799697558062	0.204799030625297	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62581156516825	0.465515277017237
Merged-chr8-27177799-1	1.70191181569736	0	1.58440259538985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-19161355-1	4.58949824885667	-0.725285369289989	0.820421166440705	-0.88404029412911	0.376674461642862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56106726520025	2.45654710140128
Merged-chr15-34045601-1	7.19546705904178	1.08376812225387	0.759032683351026	1.42782800533593	0.153341369919114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94563982580623	4.60528732818045
Merged-chr15-59248622-1	1.62193596683548	0	1.49322184193082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34257439-1	8.02003506954368	0.445688425891982	0.587898660907636	0.758104169184361	0.448388624013172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63953956491074	4.05626217989611
Merged-chr4-103265337-1	3.54367105345117	-1.18861159442487	1.09027451997784	-1.09019478364864	0.275627350676612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.577068348605183
Merged-chr17-36847099-1	3.63083005068739	-2.60578661064742	0.955407109407289	-2.72740969267435	0.00638337279950022	0.145979706355924	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86235218844904	1.27673210875742
Merged-chr11-31899238-1	1.94474042546695	0	1.50344831590581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65426572-1	1.54963299434331	0	1.49727921399173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67813725-1	3.23736524018319	0.117612611610189	1.00724068816791	0.116767137181597	0.90704458629172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7414873742332	2.24986710229783
Merged-chr6-70837518-1	1.80439605327897	0	1.49355263102669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74879485-1	4.90789308602324	-0.559466782127943	0.769316107335261	-0.727226138636055	0.467087436373829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80358933025737	2.75265646118212
Merged-chr7-111969729-1	4.66347047494733	0.829148757731464	1.02526893591481	0.808713429897928	0.418680001428707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	2.20784869593528
Merged-chr10-12875644-1	2.92116460830915	0.818284254545325	0.996573199949485	0.821097993189866	0.411590453033896	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	2.27857590116594
Merged-chr15-38002397-1	1.38290605261425	0	1.7343834687275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136126405-1	2.48985595882833	-1.57268144292934	1.84604610624368	-0.851918832151715	0.39425914374169	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66149830655093	1.37135198817083
Merged-chr11-119416183-1	3.39628848537263	-0.73954216974734	1.06297097067934	-0.695731294782871	0.486597123180601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10663323369202	1.30281892590853
Merged-chr18-61215859-1	3.75040430176813	-4.38269229599223	1.14945257365962	-3.81285178390495	0.000137372500039276	0.0076432259259314	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25999104303911	0
Merged-chr11-115691231-1	2.885005793631	0	1.38120986737617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58663203-1	2.9742777261108	0	1.40632642172354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40899782-1	1.63162411580277	0	1.43334314679941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58663507-1	1.90413735696568	0	1.43608741471505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79595415-1	2.19159085118172	0	1.45439875398405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64257177-4	6.16750738257423	-1.48484969167175	0.848530381661336	-1.74990751511403	0.0801342737151131	0.794459052504074	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96413833290342	0.838451940269823
Merged-chr13-58484872-3	3.68742082083114	0	1.3967212907226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37002258-2	2.18611106888788	0	1.41557188239564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121934643-1	6.68490399038391	-0.0149245923390784	0.609428269619246	-0.02448949791647	0.980462160652821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33612437467064	2.8239157937873
Merged-chr15-80706870-2	2.89603610332374	0	1.40306512045227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-38561361-1	2.24967223858485	0	1.46901611442664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106020058-1	2.67818727205256	0	1.43054508047447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12153542-1	2.10512465096397	0	1.47743083167189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149336079-2	3.50638095373152	0	1.37971611465658	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104644156-2	3.3822355240294	0	1.39885660457804	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60691090-1	1.8860246783547	0	1.49843415702821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20950037-2	1.24635157523138	0	1.91813186529139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59256124-2	2.17826051302106	0	1.4911007485934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80548902-3	3.93795582485854	0	1.38502831639418	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-174312323-1	2.37148773685478	0	1.44009906855427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-127675249-1	3.03617191171481	0	1.39404185906296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-47317835-2	2.22402176611818	0	1.48596501760987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34662015-1	1.79814977901442	0	1.45808833791327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115230741-1	2.61952872039975	0	1.40995813972738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40731866-1	2.64985185457685	-2.66327995544312	1.23080709130217	-2.16384840017896	0.0304759861627915	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45063110846411	0.376242425970964
Merged-chr12-32693139-2	3.28617464377203	0	1.40838987333457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118701820-2	5.35001674629212	0.191305424835929	0.804126603578401	0.237904608533794	0.811955081033479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78453933845187	3.71863598161989
Merged-chr9-52095904-2	2.14079291622626	1.21105661880222	1.39728039262216	0.866724120081248	0.386093186406231	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr1-128746728-1	6.21417317949235	0.134690686974733	0.756817857926844	0.177969752647873	0.858746730382776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.67081115113502	3.00036526253863
Merged-chr9-66878291-1	2.10365221150326	0	1.47697111994084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118200543-2	1.80790285491374	0	1.4953952592943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145047879-1	3.73616176816569	-3.62397984414175	1.17866252781068	-3.07465432949085	0.00210746655112274	0.0649800194285202	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13938900109644	0
Merged-chr11-115143826-2	2.55307230797208	0	1.39052177818497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54680259-2	4.95430138578064	0	1.3697150993996	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142859720-2	3.25204911567554	0	1.38954663261161	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16059505-1	6.8768937924273	-0.786179313346278	0.859802959150831	-0.914371490559575	0.360521677000968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98895193515168	2.43214483180638
Merged-chr5-63358479-1	2.5899011209899	-1.58677144553686	1.90851618065237	-0.831416291683977	0.40573849870416	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78809390502394	1.47418322843784
Merged-chr8-39573195-1	4.06522823315533	-0.837199771601804	0.960856425258568	-0.871305795115553	0.383587207111302	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.02292369297257	1.2636608194585
Merged-chr5-147541899-1	4.18878500576189	-0.095715046691481	1.00233613194332	-0.095491964862036	0.923924072207322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74280392117882	2.45400387056762
Merged-chr1-91088195-1	1.2538386535913	0	1.88785400962516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121389213-1	2.30832874851826	1.60002509965499	1.02276810763201	1.56440652354666	0.117722129678151	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	2.8801347565592
Merged-chr15-50402780-1	3.10743446177952	0	1.41217338030495	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-122421208-1	2.29596980201102	0	1.4171801484175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-180351067-1	2.2841595712373	0.568882412559885	1.38834674891261	0.409755281240404	0.68198547325598	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.882176137820124
Merged-chr9-44569796-3	4.34382229416881	0.781281134882935	1.24752255552844	0.62626613957452	0.53114039185311	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.06702908365212
Merged-chr2-49727868-1	2.23241639740859	0	1.46494025879282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33172014-1	2.08056651922218	0	1.42639641629107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101746616-1	1.89322358495436	0	1.51381140005376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108991639-1	1.57305889130145	0	1.52759761615543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88041364-1	2.69188763325474	0	1.39565296793004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28038410-1	3.38111996935496	0	1.39604901639438	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157141928-1	1.13130560794054	0	1.68855904336077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46185317-2	3.12941910152207	0	1.38712356373046	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-26659836-1	3.1552329980269	-1.92649098487586	1.88818809828772	-1.02028552484939	0.307593066334313	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14680903794924	1.39949824061849
Merged-chr18-32569571-2	1.68879423119789	0	1.61371625753574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-10825701-1	1.6182506503907	0	1.51132233022333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96760190-1	6.54333357078652	-0.548896578730508	0.616059751887137	-0.890979449719135	0.372940195085246	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58132906412137	2.57446180056629
Merged-chr7-80206334-1	1.98109344480351	0	1.50684024044354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-43795050-2	3.23913547599521	0	1.38120669501184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7645519-1	2.15991025782939	0	1.44920628516405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-170676179-1	1.4759995339986	0	1.46246330025175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136688636-1	1.41648855767046	0	1.76012693687586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118083802-1	3.99933165768545	0.898589015627694	0.888262118674329	1.01162595672635	0.311716930240804	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79586598792836	2.60483418071741
Merged-chr15-34397863-1	2.34345840659796	2.09177572160113	1.50288191703009	1.39184303031258	0.163969936393372	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.48073817051347
Merged-chr9-40786982-1	4.09524516118345	-1.44681050907329	0.815105777281302	-1.77499724501889	0.0758983420813934	0.769300387320989	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77212326512036	1.80318417392096
Merged-chr13-45941630-1	1.62188268392572	0	1.58753877753501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99247936-1	2.9256429410223	0	1.42191906428473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28818051-1	2.02249601722658	0	1.45678131722161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38640749-1	2.11755330268546	0	1.45768403615414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-42683092-1	2.90799799095812	1.22917835296439	1.41944880723688	0.865954690790948	0.38651500937347	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03169262342392	2.21028622574614
Merged-chrX-107250595-1	1.71071889164705	0	1.45229055842506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106329907-1	1.81131311700461	0	1.54006849168802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69525271-1	0.974585643956844	0	2.11447504456634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-21621960-1	2.9790866726707	0.352668302700281	1.27627460241177	0.276326350170916	0.782297418990596	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64087847020211	2.68390829519069
Merged-chr1-173909252-1	5.04284709292785	-1.35545590014659	1.40715400433641	-0.963260521570132	0.335416799774567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr1-175924066-1	4.06918071528874	0.135064818903145	0.897922788145291	0.15041919047642	0.880433901709385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	1.45526469271556
Merged-chr14-58123080-1	1.06531399061634	0	1.71632591542282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137816048-1	2.39161210644852	-2.55369608606057	1.42222508133276	-1.79556395086741	0.0725638934572013	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	0
Merged-chr4-137653701-1	2.40811002872013	0.678446015886471	2.3164499992496	0.292881787263377	0.76961251039336	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73495917314228	2.76268777207059
Merged-chr10-66911805-2	2.89545626271341	0	1.40757595863945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111119959-1	1.30336627798709	0	1.69917214018393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56172130-1	1.41052668329232	0	1.67185936346646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101619702-1	2.25648203810891	0	1.42021704724845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130112455-1	1.89618400711208	0	1.48995072113939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100543059-2	2.09921984553235	0	1.45364431496066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34260238-1	5.1365916990459	-1.29552744271996	0.923044179420305	-1.4035378496548	0.160456513482082	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86916981178075	1.65074499391267
Merged-chr2-85047344-1	3.96639177200105	-0.155753954092447	1.14717276756427	-0.135772011414768	0.892001517794063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	1.30064958020929
Merged-chr13-94713637-1	1.96728243662898	0	1.45694763279117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-6476646-1	2.71123394592994	0	1.49054365020137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150115722-1	4.88682365214152	0.881163708957332	0.734832590267284	1.19913531412212	0.230475334567886	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96022219655055	3.78441467321896
Merged-chr16-77020421-1	2.63347346987092	0	1.40768394824883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64556131-1	2.19332628944297	0.525678143090939	1.37546414894139	0.382182366218356	0.702326100601985	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.724326877898254
Merged-chr12-5181761-1	3.159437547929	0	1.39400289839062	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6335232-1	2.23316294792935	0	1.41045088329818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24257538-1	1.84496747469815	0	1.53183306245679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57957776-1	1.81838927981586	0	1.46492520470701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-152124616-1	3.31191840655881	0	1.38520566851632	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77545518-1	1.92542162111959	0	1.63521916154916	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93477715-1	2.05671689307602	1.85112116428306	1.41821337997573	1.30524869559103	0.191808177606571	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr2-61494651-1	1.76665412293454	0	1.47088966045156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115212633-1	2.93714757029426	-1.43260876312466	1.28995277690565	-1.11059008420542	0.266744832840544	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75407002026863	1.60184966324115
Merged-chr9-85206094-1	1.14945564572317	0	1.55622745445488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-106688615-1	5.08616348448321	-1.33767806953026	0.738836826784927	-1.81051894144369	0.0702153497031952	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21750824656562	2.42652737872915
Merged-chr1-184484490-1	2.1419360475368	0	1.45106871314207	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-83448796-1	1.06350302831142	0	1.5745078108799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102654878-1	3.19939084644951	-0.0337050405227207	0.931230538376632	-0.0361940885030221	0.971127599594066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77128661274154	1.75132748634479
Merged-chr3-103907576-1	2.05699203268886	0	1.69347717140343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95853937-1	1.89263645278486	0	1.43814904672287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70989304-1	2.09987066860459	0	1.56639177190479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-80902959-1	2.01057265369245	0	1.42385130799283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53170127-1	1.48100137354723	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64059498-1	1.80453369255822	0	1.4594116905353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150373068-2	3.52820617180689	0	1.39403977635447	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93767730-2	2.88511521520448	0	1.38599834321816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-77050022-2	4.97112853517049	-1.54756288190114	1.2221908189253	-1.26622034623198	0.205434205129862	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.465515277017237
Merged-chr5-99341495-2	3.43756384862475	0	1.44178863800244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33558491-2	2.54415030176158	0	1.46102981261289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171109153-1	5.02710003026331	-0.391301041207813	0.81345355895316	-0.481036731477801	0.630490393029389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77826303566396	3.58889841719931
Merged-chr11-21448186-2	2.83486548680701	-0.401313894866015	0.921803231870177	-0.435357439626046	0.663302997973259	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97271257483112	1.39284430389808
Merged-chr2-102942670-2	5.07334644287062	0	1.36064391931809	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84935908-2	3.52790348159728	-0.688577194273063	1.43610019304649	-0.479477126740258	0.631599236580291	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr17-47716039-2	4.09958975365629	-0.612405715367922	0.914148454017316	-0.669919325112507	0.502909219746064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96027510505613	1.25298535761957
Merged-chr5-24486257-2	3.02952647910492	0	1.3969058242728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125932573-1	2.24467369770782	3.04338611665813	1.32339990466307	2.29967231064064	0.02146679197854	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.28142835264414
Merged-chr12-83939497-1	1.98511726885791	0	1.46873718162514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90207880-1	4.05727378527356	0.229575599404383	1.00964287235307	0.227382974406914	0.820125958040923	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82216449091747	3.20644307307538
Merged-chr15-38469275-1	2.39901221634053	0	1.42781700868999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125640356-3	3.94223899789602	0	1.39787083092015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69898944-1	5.97945928656035	1.045705810113	0.739324477720139	1.41440712654024	0.157242398841036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50224159696657	3.24886260767016
Merged-chr5-43865175-1	7.28913854814595	-1.08178767492896	0.730238047437549	-1.48141784548891	0.13849526222795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83098930992088	1.65422789556272
Merged-chr8-70000732-3	9.2770585904082	-0.119686174506706	0.665403536199385	-0.179870060790964	0.857254579851762	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13812511913666	3.92473642189398
Merged-chr7-141911523-2	2.34836919537654	0	1.42157828730127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43520801-3	4.10007065187642	0	1.40798462963484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20811958-1	1.33677628904866	0	1.47802103356428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103104133-1	3.18677971288914	0	1.40831208895926	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-102841286-1	3.7443033389618	-0.476599283050058	0.855513897999145	-0.557091222205409	0.577465104535641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09032553771468	1.45526469271556
Merged-chr11-6680529-1	1.61285039488066	0	1.52121498114788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73451787-1	2.19441050348632	0	1.46453026214242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99188767-1	3.19291693268274	2.05592732140955	1.17185853343171	1.75441596639563	0.0793592574668464	0.790578813683853	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27256041875316	2.83657251130265
Merged-chr11-77441192-1	1.45046121002488	0	1.58943381553945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159211094-1	2.28725989399603	-2.40122450239852	1.34974031028778	-1.77902703512393	0.0752353297397486	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76863173449358	0.41385117919798
Merged-chr19-10940962-1	2.0359824962432	0	1.4248764578171	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114964299-1	3.48178280304208	-1.74058007008811	1.10872726262489	-1.56989020543007	0.116440656642561	0.998201806407979	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2877026006244	1.66954091443199
Merged-chr5-130845732-1	2.62519275741457	0	1.39706726825891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59201385-1	2.37928001580917	0	1.4502327951825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92753401-1	1.05760153583064	0	1.75227322235539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93823033-2	6.05599096390612	-0.521606384593784	0.684381269730239	-0.762157597912322	0.445965949742125	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08133663304271	2.24205715233425
Merged-chr1-20466522-1	1.70404721145768	0	1.48085571565886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139597854-1	6.23345158133488	-0.481732625476981	0.654908475573925	-0.735572440186879	0.461990939837859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77697822978002	3.52555912699625
Merged-chr1-88238728-1	2.54383119053843	0	1.5163453645802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184231196-1	1.71041512453863	0	1.5102952117216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40781753-1	0.704057730603551	0	1.92291030478649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32131500-1	1.52535147314128	0	1.47980857109819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59565917-1	1.57546915911185	1.57949395800648	1.50840895746459	1.04712581438218	0.295041554816186	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr5-115495806-1	3.57467662837263	-0.490959695158346	1.66074743033255	-0.295625744283124	0.767515910848722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66067886431113	1.51569035651751
Merged-chr7-109470866-1	1.07578485637175	0	1.92300723167722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76531245-1	2.49392846004611	0	1.44794204476385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43035315-1	1.79648652827687	0	1.48335166152144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26809457-1	1.7856718133425	0	1.45189654190878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50799997-1	3.62586366237198	-0.805844554346841	0.909006740354105	-0.886511087951805	0.375342181919655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75238521850622	1.38572824442771
Merged-chr18-69510957-1	1.45827473801301	0	1.56357229469364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39103114-1	1.6527051463512	1.40638185492063	1.72935265778244	0.813241792292409	0.41607944252773	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.32509503823899
Merged-chr2-160336523-1	3.10420458176148	0	1.37987965796748	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140822280-1	3.39139634748675	0.263993239472594	1.16168322264542	0.227250625924872	0.820228863494701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	1.62825810554086
Merged-chr12-104177458-1	6.50147235433211	0.0377929523347191	0.851851359520276	0.044365665338613	0.964612929777906	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56173046451715	3.2886407724102
Merged-chr11-37186301-1	2.1555356095323	0	1.46823640360954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46305549-1	3.89583805034803	0	1.44653231732157	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67182473-1	2.07502528714704	1.84590423228148	1.48552410364435	1.24259460196777	0.214017260090769	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr11-110782059-1	1.57353230994521	0	1.55147533829408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35600051-1	2.46498881994031	0	1.46849616321154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95326084-1	2.2901527791582	0	1.44022461694798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126576159-1	2.31838527541683	0	1.45559471142772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98716359-1	1.64453233948508	0	1.47323262903738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11345406-1	1.47056909687617	0	1.49278789391797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54967914-1	3.23005275487456	-3.17867233155079	1.20457112994979	-2.63884153664159	0.00831898564615835	0.177758418570414	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56785779735851	0.465515277017237
Merged-chr18-60515694-1	2.47936072770055	0	1.42304359108838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94296964-1	2.00181474443747	0	1.500509112961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44952688-1	3.86676210697458	0	1.40902986243646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-38014269-1	3.99878302101363	0.515571579512365	0.99017089387387	0.520689491785889	0.602583095821663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79052205812141	3.12337882618474
Merged-chr1-161412260-2	2.76188716805945	0	1.54786634444531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89029520-1	7.67459035551223	0.867946181629343	0.694858447824435	1.24909783330236	0.211629293026922	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63051091633326	4.44589813272689
Merged-chr8-70561398-1	1.47610502222229	0	1.51701059563109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24929652-1	3.2876435166816	1.84603627450311	1.46873038000473	1.25689255130486	0.208792546122338	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr19-5073145-1	2.31673173595469	0	1.43787816618426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120629794-1	2.21400822012886	0	1.4229015393316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148401029-1	1.31563083366399	0	1.66364922416939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3023237-1	1.41427431831356	0	2.43202087968948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33049063-1	1.57965812456139	0	1.55998304213449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74697977-1	3.63088806027605	0.968613800581674	1.05804536341272	0.915474736789558	0.35994245911673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	1.40024388691264
Merged-chr2-129374426-1	4.34327866224217	0.0593158443546149	0.989461645077773	0.0599475933702843	0.952197373999829	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90657679739794	2.07923805465991
Merged-chr8-39428767-1	2.71768647253511	-1.31737082605239	1.01374059315626	-1.29951472294385	0.193767344130572	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26087918380575	1.27673210875742
Merged-chr5-23890941-1	4.55997050953248	0.169408950813305	0.850781243043923	0.199121633437985	0.842167599030461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76891977860032	1.79305269258721
Merged-chr7-80328581-1	4.75125712437954	-1.55606191526828	1.52244156527965	-1.02208317925323	0.306741533638044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41501907634905	2.09394344543808
Merged-chr11-77630540-1	2.11286678818745	0	1.40767033378738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-24255305-1	2.62357982045146	1.88421389595547	1.33453060029443	1.41189261268326	0.157981583228643	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.28848706640499
Merged-chr5-124583412-1	2.80536066856115	-2.28162832957137	1.19200471524807	-1.91411015441876	0.0556060823240408	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64657622174718	1.84897751685564
Merged-chr3-79180906-1	2.70371313072002	0	1.44340712442302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34347304-1	1.00341252371019	0	1.60866866771966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-144312428-1	1.26629183313278	0	1.51695833647192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99865399-3	2.72307453596618	0	1.40667146071406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81837541-1	4.79880087633951	-0.863334442056987	0.649709776793026	-1.32880013953063	0.183913916154009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.13531823222829	3.10451497816971
Merged-chr11-80169351-1	2.76252496777653	0	1.41667890336206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-36970832-2	2.63841678257366	0	1.42138749642701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-34500293-2	2.31363557867366	0	1.58770813329834	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79838224-1	1.82172768088915	0	1.47507882279467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-67378768-1	1.96538667604037	0	1.44145336787886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122639649-1	1.18460130210469	0	1.73238985302491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66357046-1	2.61988418137948	-0.0883187838661998	1.23829155066564	-0.0713230933528737	0.943140616192663	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.67591700901439
Merged-chr12-91314407-1	1.91602452218816	0	1.45042386423338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24035888-2	5.69791674209589	0.625219342862406	0.767229472027872	0.814905273659368	0.415126534258565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71994542033907	3.82619184585475
Merged-chr13-76690377-2	5.14469432661951	-0.342953829335442	0.990648568568132	-0.346191212723541	0.729199018141321	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.48029254815892
Merged-chr9-114928694-2	7.6200426145124	0.202791432958426	0.64133388197596	0.316202587540864	0.751848743861851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37304054512731	3.31722748527629
Merged-chr17-67348485-1	4.87727164690516	0.0840625089504668	0.794541679297234	0.105799999094849	0.915741037509001	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.62144175773092
Merged-chr17-30559742-3	5.22543152571322	-0.559288042437333	0.777459824699929	-0.719378705714084	0.47190761356421	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58707500045288	0.921168194051549
Merged-chr19-25019538-1	3.18611237384684	3.99855911277723	1.16255604151929	3.43945493376106	0.000582886821853019	0.0240585761192925	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.41387450741157
Merged-chr15-101976810-2	2.55257683303106	0	1.41473833915613	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-31349937-1	4.28717444271047	0.0493969497900699	0.807074877550543	0.0612049156330931	0.951196014965455	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22017310661124	2.34502298933502
Merged-chr6-83696871-2	2.67211998088565	0	1.40924535806102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118511843-2	1.89949290579077	0	1.54840582369009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62466815-2	3.4674681233949	0	1.39719959028184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94233814-1	2.49404259643932	0	1.42307902212979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35540210-3	4.00478208118097	0	1.37615546132395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-178309028-1	2.57797424346314	0	1.47451337135747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrUn_JH584304-25326-1	1.59175833558117	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129892880-2	5.88385600797806	-0.545048058789387	0.746624466784614	-0.730016337579548	0.465380198237099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27725416190718	2.20408075798058
Merged-chr11-11776051-4	10.526716912147	-0.598457770028697	0.598381996121946	-1.00012663132788	0.317249229594724	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.22057192742703	2.23702757706492
Merged-chr18-75465129-3	4.00259355688109	0	1.38281031709459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-138165600-2	3.35660991776869	0	1.42226556334508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17788198-2	2.67901900363353	0	1.38195517516141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5886433-2	2.92545974057284	0	1.40629770204056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40152458-1	1.95487735172497	0	1.47357767284843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26503396-1	2.67327502284598	1.83459322759133	1.35149548929286	1.35745419953362	0.174636936763012	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr5-114650611-1	4.1446059364574	0.194914925660788	1.09095970221617	0.178663726318067	0.858201753041193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79663408657972	2.85473182858932
Merged-chr3-36341054-1	1.8170407585392	0	1.68857241320741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-30373963-1	1.8827524236315	3.6477686996933	1.54309266784004	2.36393366109328	0.018082050131365	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	2.6940991192642
Merged-chr12-24688447-1	1.94746626059457	0.569779198477421	2.40466540175871	0.236947393205183	0.812697602237818	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5713323725813	1.99363527715616
Merged-chr18-35477988-1	1.43743914735573	0	1.5452405870912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145233418-1	4.41219748493422	0	1.37392074830907	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8506224-1	1.73523047970606	0	1.49154191140743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19094065-1	3.33466901791012	-3.32863298481328	1.16074427580557	-2.86767124697053	0.00413504957511637	0.107962132494597	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	0
Merged-chr8-22935068-1	2.51414651711348	0	1.45776451372742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186579571-1	1.80048361035654	0	1.43747814057974	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38945203-1	2.15470216717275	0	1.42756076966319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104715188-4	3.23022731133801	0	1.3994463110083	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37524550-1	4.0327259271788	2.26815567656085	1.30043248330975	1.74415489129288	0.0811320846465281	0.801081218582669	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	3.16164516901999
Merged-chr17-49971255-1	2.05838960497999	0	1.48597502257351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25216005-1	2.28863647456219	0	1.38724999944499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97751754-1	1.8484935400384	0	1.42911316283003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4633871-1	0.801482736473538	0	1.75738686828344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21758642-1	5.09409006985567	-0.548684303375491	0.76158301775097	-0.720452387443998	0.471246504835608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71642742107674	2.33877259814021
Merged-chr6-48546470-1	5.40767906527996	1.37347792977907	0.792972507196698	1.73206248301668	0.0832624380799621	0.814186521242788	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8763281121661	2.85473182858932
Merged-chrX-106130911-1	2.67263471991156	0	1.43598948275868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3370216-1	2.31916148655726	0	1.42470450866695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-63953478-1	1.36855061603661	0	1.50390864649991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56412878-1	2.08279295964166	0	1.51906221549404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-148059037-1	2.54325424601919	-1.52440086594003	1.31184637098269	-1.16202697180015	0.245224509199885	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36834648824076	1.76197067039868
Merged-chr11-70151274-3	3.24834003149789	0	1.39778641243522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103374989-1	2.50528154432246	0	1.4441348091222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112593983-1	2.90697313023936	0	1.40689042187443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70862718-1	1.96154790907898	0	1.45037594160997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19466852-1	3.0319830928376	0	1.43691331016626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114651125-2	5.21933192846479	1.67489949377257	0.904294979872	1.85216055717753	0.0640027707802581	0.694159340950529	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	2.62422746495551
Merged-chr18-65426831-1	1.46780477655026	0	1.7123173981575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-40113396-1	2.07777224877175	0	1.44459920132249	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45758222-1	2.34581796189107	0	1.47827408551889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123900394-1	3.04038957393041	0.958619209786487	0.948403793165135	1.01077116803515	0.312125965628737	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44575596919856	3.55991596844388
Merged-chr10-84398667-1	1.70873316219359	0	1.47473410310875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108609950-1	1.64951843373757	0	1.54019067732684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126111146-1	2.91884202277536	0.881513520233154	1.97329777027897	0.446720983274883	0.65507652943774	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02918678136929	2.39905087366687
Merged-chr1-45817086-1	2.56598099936943	0	1.41083307968426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58488696-1	1.57284015268866	0	1.48068718787884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70376982-1	2.49592475812778	0	1.44216810199941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95001261-2	2.7984336083926	0	1.38490863052508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4731599-2	2.96650906120446	0	1.4006966173821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88432776-1	1.42115214334712	0	1.5370540646283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86931234-1	2.68352206197183	0.709712037738601	1.21795662666863	0.582707152454038	0.560090457477367	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78734291970211	2.2391836681091
Merged-chr10-125318731-1	1.65028836445984	0	1.43789852179886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76852022-1	1.5445428685482	0	1.50583223856846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146645696-1	2.52820022720983	0.620781214119805	1.40494741840029	0.441853699284095	0.658595077118268	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr6-99440059-1	1.44212355749398	0	1.56707034522037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-86781788-1	3.30961243681994	-0.593468053791108	0.991324475178318	-0.598661758738838	0.549398463216382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41396759389214	1.6794096906117
Merged-chr14-30218261-1	2.87971047673438	-1.18761794950136	1.15095120812784	-1.03185777217538	0.302138750520038	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	0.723581231604105
Merged-chr4-46689597-1	1.92264010624523	0	1.44695317105321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50437346-1	1.20299648280837	0	1.61463520142422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172336699-1	4.18386323307874	0.226697490556788	0.687437729196897	0.329771673750913	0.741572492239732	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5588424040667	3.42410787034314
Merged-chr13-11895841-1	1.27919375703635	0	1.7373260531134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-30998566-1	2.10905473123519	-1.91512764077957	1.34703212178443	-1.42173865775567	0.155102133229475	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr14-54388904-1	2.91565169848357	-2.10019641936618	1.20855876444205	-1.73776938379639	0.0822514573974183	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	0.465515277017237
Merged-chr2-29412619-1	1.21625485180959	0	1.67000602950261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13342846-1	3.57235475278159	-2.64902686384223	1.13615216977793	-2.33157752483102	0.0197229273224984	0.317065178392106	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96027510505613	0.303163067301871
Merged-chr19-59389369-1	2.1628179718829	0	1.42995448941099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-114837168-2	2.01750476268178	0	1.51799037475252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76322459-1	1.15700940521913	0	1.56682362052425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54476731-1	2.51424280329553	0	1.45390593037226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151709010-1	0.718591007834399	0	1.71547982678792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70028569-3	3.32926213672918	0	1.37839356283837	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95508278-1	2.57305246080192	0	1.42022580704217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99917431-1	1.66915494149873	0	1.64588537526776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111478923-3	8.64999521577753	-1.6508795595932	0.757902588943477	-2.17822129608311	0.029389565325239	0.418216592019546	C57BL6J_F1_Control-BALBCJ_F1_Control	4.88349290874147	2.79633501002669
Merged-chr4-148060527-3	3.4961965644846	0	1.41759082853669	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-37014496-2	4.58001793442146	4.15636543431886	1.17846304140169	3.52693745013437	0.000420396066212665	0.0189720206276086	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	4.27179503722146
Merged-chr6-125218755-2	5.23073269154351	-0.568160383709061	1.0866116303932	-0.522873460781445	0.601062314226815	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35686799001988	1.47751579018518
Merged-chr7-110930632-2	3.29666823170932	0	1.38356524135146	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143434608-2	3.22464728990366	0	1.39606011243682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-149376059-2	2.51995076057823	0	1.41730308394755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81849936-1	7.55886718726635	0.868757490114236	0.787332952416299	1.10341817581501	0.269845607098859	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34557707159302	2.73194986207069
Merged-chr15-74528299-1	2.59540622109225	0	1.40650449357822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-187098426-1	2.2785285079402	2.2697897475021	1.20420547635651	1.8848857541901	0.0594452638440873	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.73423104448184
Merged-chr15-6525613-1	2.06992170395422	0	1.44453528956493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123200972-2	3.93330269590624	0	1.36996284693851	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150441937-1	2.01465088545917	0	1.40795936035102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41036578-1	3.52994608400846	-0.717952780148534	1.01598294353853	-0.706658300431703	0.479778849226612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08939397228322	1.94207584056134
Merged-chr2-102852221-2	4.85532445848525	-1.74682198330636	0.812053365939655	-2.15111722526394	0.0314669482413169	0.436689262049973	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95110112402599	2.04582763185197
Merged-chr18-70482085-2	5.24541501113895	-0.118879261398278	0.731569746128851	-0.162498875913521	0.870913013403315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48834673140933	2.79927826667684
Merged-chr4-86883625-2	5.08948571289342	0.0637419878297255	1.51754603947728	0.0420033304898489	0.966496043114973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26924367160755	3.03957299179048
Merged-chr11-20436297-2	6.04129287484653	2.00362468115472	0.86863402892084	2.30663848576592	0.0210749821669762	0.331869917617225	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	2.82023016400604
Merged-chr17-66094981-1	2.03139793047322	0	1.41853038519842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181334228-2	3.02043104607992	0	1.38444498402625	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112993431-1	2.26070144648835	0	1.47463449813816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57510902-2	3.26631249903718	0	1.39929057947452	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88522782-2	3.59947700887758	0	1.37817166821666	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23467259-1	3.39138322198604	0.558539609044987	1.2212808057425	0.457339218317948	0.647427244940708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	1.55786690966792
Merged-chr11-115248184-2	4.45129188655246	0.0150083621108387	0.976885690745888	0.0153634782994715	0.987742200081147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.62337667978575
Merged-chr12-86974733-1	2.36385330097899	0	1.41717112118308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121800114-2	2.33418628107042	0	1.50162708066856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96376771-3	2.99024223656433	0	1.39431187911058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4309784-1	1.48486798795889	0	1.75787132126604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169780131-1	2.72725258561112	0.592250375549499	1.18486880932974	0.499844683973515	0.617184444473324	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.18984215491549
Merged-chr1-13382458-1	2.9391851738806	-3.3601772857819	1.47935247573471	-2.27138382562485	0.0231237526838826	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	0
Merged-chr12-34663324-3	9.79585327083499	-0.343130846904434	0.573753845698611	-0.598045397824974	0.549809641880517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65443278894413	3.10638084276568
Merged-chr7-28972884-2	2.80658210866956	0	1.43602576151012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173768920-1	1.45883901023459	0	1.51720223097713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33513588-1	1.23804293405288	0	1.54127623871996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55823747-1	1.17625091113869	0	1.51033771047554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35189142-1	2.2862417096818	0	1.48480770036851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58108423-1	6.30586447815509	-0.310994000442055	0.765722182875412	-0.406144692418629	0.68463628912115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5392607781143	2.3617181621474
Merged-chr3-135522748-1	1.42091952651941	0	1.50919331338831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48407502-1	2.56431135874132	0	1.50713520724892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149462730-1	2.74328405822684	0	1.41911415497539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36509480-2	3.67939805953935	0	1.49129570472899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45194141-1	1.64798550043707	0	1.51662935691564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38390276-1	1.07559214159315	0	1.53172429037292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-118174218-1	0.932159636742998	-0.927686239123693	2.41620239663837	-0.383943928047738	0.70102000704015	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr15-36760827-1	2.4080286983132	0	1.39811401123126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25341871-1	1.71378265969612	0	1.44334652832021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54719155-1	2.80232323241631	-1.3644815888703	1.50408154504847	-0.907185912467486	0.364308492141501	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr15-101258973-1	6.53882200116541	0	1.35519174901836	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127467995-1	2.06534197104031	0	1.45268064396015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122151030-1	1.72149366448136	0	1.48494908934086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8387029-1	1.78782653866231	0	1.46140732354342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73452426-1	1.8514622001665	0	1.46230445404616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5108356-1	1.98181703529523	0	1.43899324723892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124898127-1	3.19440242793299	0	1.37470763284652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75100528-1	1.55760556362202	0	1.47655528888293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4417326-1	4.74555147165097	0.842711434801483	0.769948885170661	1.09450309109116	0.273734392423772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12069662938216	2.88063057085562
Merged-chrX-152151897-1	2.46700074030157	0	1.43088364412014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105298713-1	2.11546340794301	0	1.50782424527196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39893329-1	1.89312986104261	0	1.47527099541201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88510898-1	4.57089667014607	-0.609440860793926	0.872287603359944	-0.698669634242692	0.484758515056961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76463764896075	3.06506942790446
Merged-chr10-49586947-1	3.15972894237675	0.455261881173652	1.29024146648959	0.352850139293925	0.724200792538702	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.06702908365212
Merged-chr4-139599488-2	11.7395361311408	0.471103638752499	0.638381831374179	0.737965298508579	0.460535536665373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32131143445014	3.18555315328735
Merged-chr6-136819254-1	3.50104496542988	-1.20057778514931	1.165932248951	-1.02971487942758	0.303143868675414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72764730920313	1.83064801361452
Merged-chr3-69672811-1	4.72333347247945	-0.179348566494934	1.04225152094796	-0.172078008897325	0.863376201224192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84443791261164	2.38205396486743
Merged-chr8-36124205-1	4.11595778364732	-3.14197776381552	1.11309170467896	-2.82274834194522	0.00476139299325078	0.118945111084614	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60429063827851	0.303163067301871
Merged-chrX-60021246-1	1.74003280517455	0	1.44939630879571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-57499376-1	1.65036547015771	0	1.46749314621054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107770778-1	1.98992988354259	0	1.42758209784521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124025428-1	1.4330629934302	0	1.49805513274697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119616178-1	1.76625522884133	0	1.4838500888414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-76350055-1	1.31285310717751	0	1.55104578587222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27666937-1	1.81286841024783	0	1.45819825617064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118104182-1	1.84593071026652	0	1.40653891535135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36798519-1	1.96264446188895	0	1.46244577426874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116767889-1	2.35950955438352	0	1.42795950810474	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118621269-1	3.12559469933064	-0.766503398995784	1.00636536488627	-0.761655185820515	0.446265828619459	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42786128734841	2.02714580380678
Merged-chr7-25771226-1	2.34076790316392	-0.0335512911640689	0.996274080198686	-0.0336767681011813	0.973134904831663	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	1.41437199749648
Merged-chr2-154687852-1	2.9608813915079	0	1.43938789520859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72144854-1	2.18161954298478	0	1.57056048882671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25185926-2	3.24241412073161	0	1.39207268826473	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92553004-1	2.34866912960303	0.617583256509103	1.43733606853267	0.4296721344644	0.667434156308221	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr19-58904192-1	1.9767084474019	0	1.45612344753919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157578704-1	2.63996737016629	0	1.39472892562164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18318647-1	1.57698742213353	0	1.4895672373989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-45752056-1	1.86179704507196	0	1.47739754596773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129634122-1	3.31383148672064	1.68372916208082	1.24753468231361	1.34964517295685	0.177129826820426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.730937814817307
Merged-chr4-150544391-2	5.50429740681797	0.2394847035596	0.806144206276884	0.297074272437734	0.766409805800391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09197273807469	2.68078947292863
Merged-chr17-78605854-1	4.15678310874925	0.364177795511891	1.09637782485181	0.332164503200449	0.739765045817043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09045752086053	3.63227366197615
Merged-chr10-68241944-1	4.71762185794567	1.5080240795139	0.854863879281443	1.76405169999868	0.0777232752795643	0.780520879534793	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	3.03593015768357
Merged-chr7-35123687-1	1.64667016629924	0	1.69331482310463	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164518005-1	2.41122954423378	0	1.46690043353152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135153874-1	3.65703952746851	-1.19583399939588	1.04717792222077	-1.14195875793471	0.253471163007809	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62128842389662	1.02748994520012
Merged-chr1-175155556-1	2.41319241042758	0.990686213907648	1.35240130677978	0.732538639929731	0.463839867347547	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34550506292392	2.24908289918275
Merged-chr4-7314586-1	2.11935278977276	0	1.45290822038661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102550707-1	4.25667973897586	-0.0506308196719947	0.944093234606954	-0.0536290461747386	0.957230714304568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.83981375264212	2.277269395796
Merged-chr18-55125091-3	6.87864424327016	1.98583652104105	0.966616779219863	2.05441966633745	0.0399350912413161	0.50696675030049	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.23558145226682
Merged-chr8-22713227-1	1.96623453921387	0	1.46694499818639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-34500697-1	2.77706457350297	1.26360825652343	1.43259495210053	0.882041539145923	0.377754344380285	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chrX-102660867-1	2.30264570788868	0	1.42140671069985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60826870-1	1.46290634059741	0	1.49540665601845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43739806-2	3.62608555312948	0	1.37131943097614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12128416-2	3.72829660435236	0	1.38267885020634	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-48225316-3	3.58976639743726	0	1.38605712956687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24634533-2	2.89213867544323	0	1.39017899059349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-10885782-2	2.65293767323182	0	1.38473108204232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76541164-2	3.09319750793849	0	1.40537799601515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82784883-2	2.66227460935234	0	1.38818610212609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117373467-1	2.25825664415413	-0.0941777219510727	1.09906182680877	-0.0856891938686714	0.931713492575041	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	1.44059547810395
Merged-chr4-6371082-1	5.37576641672688	1.90321261386462	0.83670967695827	2.27463918044244	0.0229275837106199	0.353867269428049	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97634481356229	3.72655412126025
Merged-chr4-150864150-1	2.19214203210478	0	1.42651439787742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29533449-1	2.17802485950586	0	1.415349673303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32890099-2	7.06470022386242	-0.0389692923169029	0.815170080354873	-0.0478051062668274	0.961871566998744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60723990317186	2.40738452861482
Merged-chr16-49755374-2	2.17931588248869	0	1.4290190066429	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72655081-2	6.77895682136682	1.29473957033477	0.901049035529406	1.43692465035941	0.150739404817188	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47190689055611	1.74628343417448
Merged-chr12-33138040-2	5.89309256556304	0.27511103122394	0.645461554669992	0.426223729722521	0.669944827832148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81520232277756	2.98732741417802
Merged-chr1-159305195-1	3.61471222531773	2.65011087605233	1.18193935237564	2.24217162304117	0.0249502824065529	0.373834730247466	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.25298535761957
Merged-chr19-26622930-1	1.21237198667925	0	1.56614182560191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9656700-2	5.40418878869124	-0.339238641865268	0.958118879979379	-0.354067380315654	0.723288387361136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.40373237117109
Merged-chr9-90447136-2	2.88007141090739	0	1.41820871719211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100495188-2	2.54978579933465	0	1.40192637047121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21936936-2	3.46682178128098	0	1.3807510625507	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99585099-2	3.1391348589924	0	1.42485744595593	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50114225-2	6.47263204354766	1.11919336475186	0.62307538734381	1.79624069171311	0.0724562456862059	0.74794517526703	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48607140922088	4.09860849558796
Merged-chr11-51820142-2	2.35206909788403	0	1.43830481910629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76689563-3	6.62780264813707	0.857554302485299	0.818402885588523	1.04783880602843	0.294712880033854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7821740460218	2.75271288377258
Merged-chr11-70815878-2	5.96970296131285	-1.56622539385634	0.804572352386323	-1.94665574725628	0.0515760203371392	0.602670010641992	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20726183519	1.40024388691264
Merged-chr11-61147384-1	2.77756521922976	0	1.39156961764245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140063295-1	2.04063376807305	0	1.44252943860696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54699215-1	1.91548551442936	-1.93242818826357	1.54983521964619	-1.24686041700918	0.212448682775213	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr8-75234112-2	3.2695515075136	0	1.52472134267596	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171393023-1	4.8856008535724	-1.18671755462459	0.943751035970245	-1.25744768418141	0.208591571668504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91780731893528	2.21213269525289
Merged-chr1-134098129-2	3.17193542664329	0	1.3963926854301	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97751599-2	3.21106373090898	0	1.37746378242327	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122826383-2	5.6128501614042	0	1.36982133345274	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137966067-1	3.68016227744093	0.450433232176814	0.966084387363008	0.466246259714746	0.641039240587251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	1.88148957377491
Merged-chr18-4257693-1	2.03902215642194	0	1.45420887887673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127085377-1	3.06478082169636	-2.77098025761211	1.37115696447927	-2.02090667180796	0.0432894271319221	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08706762733164	0.303163067301871
Merged-chr10-127385454-1	1.89168227982532	0	1.45201715693724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63122347-1	1.37585073100897	0	1.62863506602824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37787805-1	4.55722938155534	-0.237606875024081	0.788544606286109	-0.301323315294949	0.763167963592797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71980362253162	2.89146434129448
Merged-chr11-98952019-1	2.43541464480369	0	1.45583455836473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88242694-1	2.33667455894617	0	1.40374696196734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55721029-1	5.60900253082197	1.01659480204476	0.735179947417256	1.3827836376878	0.166731217509551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45391569783273	3.25143445008958
Merged-chr4-88725973-1	1.76361540476245	0	1.47701433294949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-12813313-1	4.16688777640057	2.11842351031196	1.04760210812945	2.02216422998091	0.0431593882857099	0.53321865873074	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	2.93940661697571
Merged-chr19-22979390-1	1.48842699726809	0	1.56516492181972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32346155-2	3.62116499602176	-0.0361406005522658	1.29561191373001	-0.0278946188818367	0.977746200285257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.02674429890598
Merged-chr12-17783040-1	4.13589236875629	0.847373431399856	0.797845247312083	1.06207743200155	0.288200534453253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06239241693004	2.6160387102396
Merged-chr1-131759837-1	1.66274852749876	1.85705307146291	1.44768414474846	1.28277502948378	0.199570904830038	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr11-94994357-2	4.56547267853258	0	1.38909993796843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55022748-1	2.96826201364862	0	1.41077204475821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13445023-1	1.06771652461804	0	1.7421208813254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152770948-1	1.23285686399885	0	1.95907141686019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17474203-1	2.08486852696585	0	1.44944973024452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117724150-1	5.17659064830217	-0.994283007832286	0.950912917408412	-1.04560889817553	0.295741639339896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69442907999601	1.51383276837601
Merged-chr3-141492112-1	1.55343898842304	0	1.58232557382722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128000874-1	2.28270926829227	0	1.47647681435014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90447008-2	2.06073594251476	0	1.42662488879237	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10258601-1	2.98854009168051	0	1.44034202958225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30285525-1	1.74337296814298	0	1.54753046996727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31693454-2	6.19953302281469	-0.648305837473004	0.789798388916002	-0.820849784668216	0.411731836920289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9865626588057	1.70887105531442
Merged-chr18-82872379-1	1.8079788163278	0	1.56813352351532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106227019-1	4.82515746492878	-0.461722092990836	0.85391989309445	-0.540708908089305	0.588708237495078	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63408314561734	2.78393817196962
Merged-chr12-38815083-1	1.61952809745597	0	1.5278897911011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8577763-1	3.12165058150587	0	1.4021321442679	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80121806-1	2.57715722576428	0	1.45969464830856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152685737-1	3.08142845023213	0	1.3941718969601	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86830267-2	7.18637323875077	-1.36385982347524	0.823246960538873	-1.65668370349342	0.097583439467848	0.896794283352958	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58573450322345	1.338064021838
Merged-chr19-55530253-1	1.33761902909222	0	1.70250960871987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72725282-1	1.25200111717161	0	1.71818335798574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141575738-1	1.559343265282	0	1.51618511922081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94464122-1	1.54441695531055	0	1.48928619020999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107522142-1	1.51046433623733	0	1.50701345362846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-116964591-1	1.92136384241179	1.18017697218441	1.46650045240323	0.804757318860963	0.420959735769242	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr4-9638574-1	7.5879142482779	0.238927726580304	0.784211224565448	0.304672668658498	0.760615467774768	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08374337758267	3.20201311927822
Merged-chr15-25740473-1	1.19868773586172	0	1.57436138466833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71297899-2	6.52450357987865	-0.257469494525485	0.679252028089874	-0.379048547340397	0.704651813428546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3038113548719	3.12681563542707
Merged-chr18-82538266-1	1.72330046632211	0	1.56057422779615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123020684-1	1.80450015003083	0	1.57119688347897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62941580-1	1.49188241995528	0	1.50915855536163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95494490-2	3.46662307764169	0	1.37968512553288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-57706245-1	1.75959464569345	0	1.46093300216859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54866291-1	2.26381737967426	0	1.59169330237596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28163878-1	1.92887344135724	0	1.4283059485807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-44623438-1	1.63603436365236	0	1.4800558882837	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74986328-1	3.75165525876198	0.452535344657237	0.904931232295286	0.500077053931952	0.617020822461712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50282389800248	1.70340695421451
Merged-chr17-69106195-1	1.72362720720427	0	1.52036893523559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75983005-1	2.68062768279512	0	1.4220354566578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171753060-1	2.51514670216594	-2.85178664560641	1.25983394310039	-2.26362105992184	0.0235974314280011	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	0.303163067301871
Merged-chr9-91388971-1	0.807854906163171	0	2.01906212079498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31861614-1	3.08204221577736	1.24770762705759	1.37946212866678	0.904488496732761	0.36573643129256	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.679405493272835
Merged-chr7-28954979-1	1.68939997854929	0	1.52828701106586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-109394655-1	1.7225100235444	0	1.5199031389437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-13562826-1	1.98002284909439	0	1.47320022889439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23506032-1	1.94712921282766	0	1.43032240459108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103848416-1	4.94271417654472	0.699258713207798	0.941474077387208	0.74272752697386	0.457646660551432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.59708520306594
Merged-chr16-76416598-2	2.23609178525092	0	1.45299697318616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47587264-1	1.47858105803082	0	1.65135462055118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91146918-1	3.99851941460177	0.91110911202338	1.63663037159462	0.556698157284992	0.577733676146449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30095837608674	3.00089976758622
Merged-chr15-37941625-1	1.5603560447149	0	1.43184885200047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67431010-1	1.95347143717122	0	1.63184314742323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102855897-1	2.24182954903091	0.615105908844203	1.46168436912206	0.420819926543826	0.673886579764874	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr3-54357753-1	2.32765356205161	0	1.43974497784087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75566986-1	2.44428790986275	2.29590735106052	1.16671729158739	1.96783519676545	0.0490870030115626	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	2.93801570921767
Merged-chr1-64599284-1	1.11297258112927	0	1.60463826513066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-18549741-1	2.1877443818797	2.50570986940044	1.59917341572868	1.566878141392	0.117143177851332	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.53254748524107
Merged-chr7-44860751-1	2.65869290157647	0	1.38673323268376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-143277307-1	1.52371725583801	0.537491561484932	1.56587293128073	0.343253625979292	0.731407664822084	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	1.17788344834821
Merged-chr6-97518104-2	3.89479365129632	1.77647768085319	1.04622043507567	1.69799558610677	0.0895085949085688	0.848256225703433	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	3.6290490983364
Merged-chr13-97551015-2	1.81235511106142	0	1.62042104958622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80158970-1	3.95351068185483	0	1.44375304870978	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89619847-1	2.61032422671783	3.06727048213965	1.21200537737796	2.53073999454965	0.0113822187635893	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	3.10780090846736
Merged-chr19-55738308-2	4.28585168486467	-4.78964698165252	1.08785826719777	-4.4028226158452	1.06851527336653e-05	0.000930824066425179	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31595548659585	0
Merged-chr2-45232998-1	1.61076537774296	0	1.52301004967898	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83690470-3	3.305019698289	0	1.38355637268914	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-31215335-2	6.38566287740335	-0.294117789835862	0.762024476230875	-0.385968953767242	0.699519661903739	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40270192041382	2.56692864894054
Merged-chr18-88847524-3	3.49456616539096	0	1.41411931222536	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58477186-2	3.03508593313279	0	1.39488197000905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146385826-2	3.1235878902389	-2.87400761333678	1.22229721167232	-2.35131650951296	0.0187071136442873	0.306295177888498	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96334085054552	0.303163067301871
Merged-chr17-31093579-1	3.66466852283592	-1.33075520735235	1.03583211532828	-1.28472093851869	0.198889818666352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79135360541375	0.977756232605852
Merged-chr6-72881849-3	2.8782093833017	0	1.41315341575873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127126799-3	4.05128746478435	0	1.36604112019572	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101736212-2	5.17749810900256	0	1.37441367702227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-159950382-2	6.03274870738389	-0.525592057857822	0.711546087442948	-0.738662002550838	0.460112264318075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88398917306185	2.1304360554358
Merged-chr11-110483404-2	5.59695674541696	0.483948622051197	0.882194267615523	0.54857375502933	0.583298000926322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	2.2152741959114
Merged-chr5-148494785-2	3.16513642654917	0	1.37981486245892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53983988-2	1.98286103143909	0	1.47995846609799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51657378-2	2.32065201871587	0	1.57162612528211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-22052092-1	4.25441850308773	0.967041887532699	1.05172063300666	0.919485514673343	0.357841678791337	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	1.71667010510651
Merged-chr10-54059309-2	3.40840987541705	0	1.39509805776177	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127615900-1	1.94954622340266	0	1.4710956328601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124272270-2	5.35399487992878	1.26176652115135	0.756497727840403	1.66790523582054	0.0953345401411303	0.882993741273079	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84460451740528	3.89371695808788
Merged-chr8-120596143-2	3.0280033276266	0	1.42808628786003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115190928-1	11.0721602748885	1.45986781877052	0.506995255780516	2.87945064993372	0.00398368639490148	0.104714317572751	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49563079346334	4.85266365693215
Merged-chr1-74339327-3	3.55823444605089	0	1.38725378811826	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62222894-2	1.82870480847061	0	1.56938212055624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57543489-1	2.66877728085806	0	1.40496414156224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62353655-1	2.48113135500491	0	1.44839510981272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24150697-3	3.0819769050415	0	1.4200893533713	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94388863-1	2.15656602146068	0	1.40142892889857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32912940-3	3.0232260382066	0	1.46978134362416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28726405-2	5.74843422686238	0.471666023716943	0.968265479978294	0.487124692008556	0.626169969076811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.28070747206624	4.2493263986715
Merged-chr15-79883028-2	4.96224058175088	-0.109153714156578	0.763642225116199	-0.142938290427784	0.886338917662968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85493196052525	3.48183836903775
Merged-chr17-51099866-2	3.21868342586559	0	1.43163050743655	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68905350-1	1.52522281007063	0	1.57180901625101	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56633854-1	2.11157948447411	0	1.40581475786135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25571038-1	1.60711510103528	0	1.44371441917011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-83881282-1	2.3367265189279	0	1.41655183965314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-109218346-1	2.21222864070812	0	1.45937534603901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51629212-1	2.10767894343797	0	1.43545556518937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30512973-1	1.45189787267532	0	1.52178658073125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35104093-1	2.54318932880784	-1.5186423848992	1.00669879210075	-1.50853700909896	0.131417142077383	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.34103802701566	1.85774282263707
Merged-chr17-13591028-1	1.82566743288106	0	1.73951411931004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59428121-1	2.42269853423992	3.0237410438828	1.35682019712898	2.22854955305132	0.0258438907813427	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.22937638953367
Merged-chr4-107674278-1	3.88703038986443	-1.15337259304863	0.975983209655564	-1.18175454417465	0.237303108892857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	0.97908007631626
Merged-chr6-134239578-1	2.817976223628	-2.15614084578519	1.23649211920026	-1.74375623775082	0.0812016043961499	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05572638891514	0.465515277017237
Merged-chrX-169304136-1	1.60689107287502	0	1.57359974705839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33398657-1	2.67823447895856	0	1.47240220527799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34197183-1	4.46860198288247	1.73770169999161	1.01680522169836	1.7089818806095	0.0874543058702881	0.837254070588762	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69469308021391	3.40701948776353
Merged-chr6-145334878-1	2.71111343214948	0.287005764241018	1.18985100622913	0.241211515339719	0.809391186414209	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.06977105931173	2.82650191182405
Merged-chr9-63978839-1	1.34973830229191	0	1.65226094560985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79808968-1	3.345487396041	-2.38885715038553	1.2848527929192	-1.85924579340955	0.0629923065730031	0.687866370631152	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13691092425662	0.465515277017237
Merged-chr7-105412042-1	2.28340643031833	0	1.41296910338662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32090290-1	3.46369005937284	-0.318000023799133	1.36704823283857	-0.232617998517017	0.816058049872279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62336090161495	2.36685793401774
Merged-chrX-142380151-1	2.81966638934026	0	1.40414118551532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64598255-1	1.27955017543945	1.93987430377396	1.73940143553724	1.11525393974094	0.264741617348738	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.20194974038739
Merged-chr13-60625967-1	1.10157991478784	0	1.68157281539774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3926301-1	1.89932956165646	0	1.43679100368135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91755295-1	1.92861230514184	0	1.45960227141679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-103955675-1	1.44806793717272	0	1.48329986970322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-42172723-1	1.22722694558925	0	1.55514758414432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-68656575-1	1.40525291296024	0	1.72428955634934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108431856-1	2.07143068391712	0	1.44426644469925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39264892-1	1.36191714271977	0	1.46735965077876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100750262-1	2.50108545120748	3.76318168618527	1.23921512786989	3.03674608351002	0.002391468139559	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.84558675562706
Merged-chr15-102109328-1	2.37560490436971	0	1.39941943904209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32441663-1	3.0855876074191	0	1.42310860780587	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14535153-1	1.59081085164357	0	2.32089124341189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122333334-1	2.6542251138514	0	1.38820996288518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128195102-1	3.25027100036273	-0.737626386039595	1.18498703562628	-0.622476334223985	0.533628700497895	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	0.765562747387088
Merged-chr12-8513823-1	1.85486127060765	0	1.5738859719721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109476684-1	1.31526124237272	0	1.58897557313544	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57465213-1	3.30852264390145	1.09869634335586	0.972944586720781	1.12924863178376	0.25879296374872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	2.64634878228454
Merged-chr2-84779451-1	2.15798987036159	0	1.41524378712779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-86988339-1	3.85736340806008	-0.210011106492864	1.00101451578525	-0.209798262843492	0.833825128942781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52244464375209	2.35612604634828
Merged-chr5-92438342-1	2.81008228972282	0	1.40304458429521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57462103-1	2.85779835926459	0	1.49632850530731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34117713-1	1.8249692778367	0	1.4612006974143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-47739894-1	1.12194908017391	0	1.83282230485178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-78037728-1	2.55221119834079	0	1.49112510376002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-15205706-1	3.60573990184832	0.210498403325315	0.988494179280714	0.212948551177596	0.831367092402219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961371261847668	1.60575736942423
Merged-chr17-43033302-1	2.91923899887479	-1.13411597977653	1.31216690522934	-0.864307715167005	0.387418873050732	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0.303163067301871
Merged-chr2-140159488-1	1.98416981864465	0	1.43857011894177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21815022-3	4.47980725216628	0	1.36589540570627	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32039915-1	4.06011963764325	-0.0825403860418888	0.863208179588449	-0.0956204864523428	0.923821993918258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39205851293627	2.54485128693044
Merged-chr5-129965896-1	1.36674801424944	0	1.51603559874489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84755482-2	2.43328456512652	0	1.42852534831059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73224957-1	2.1644182879586	-3.58152908299986	1.73919920663091	-2.05929779023866	0.0394657200467877	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94822387057749	0
Merged-chr11-121056397-1	3.84884731995013	1.29067858718736	0.811485415775411	1.59051359654327	0.111719083318888	0.974007642362697	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81960882153758	3.47272801463708
Merged-chr1-77824000-1	2.34323837257395	0	1.40886597164626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114842050-2	2.31837927890052	0	1.4424007969253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126108975-1	1.91040096333884	0	1.43691984382642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84276418-1	2.25006436919967	0	1.4640660245706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88630194-1	2.40441196611324	0	1.43909246080036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-56894492-1	1.7416231280694	0	1.47055284740432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22031795-3	3.12165004459384	0	1.38308316296806	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23057893-1	4.60958273380257	-0.831767654137571	0.991380079251387	-0.838999765625367	0.401469441125158	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56112970471021	1.13743241080208
Merged-chr19-40558652-1	3.66934359155698	-0.611661375660918	1.06015041871622	-0.576957160854213	0.563968395061671	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49632546760905	1.67273088548657
Merged-chr5-149015989-1	3.53792818607516	0	1.36730086512646	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101329932-1	2.14392441134303	0	1.42180561787767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-139948028-1	2.19702839936736	-1.75819859537964	1.30725995858406	-1.344949475301	0.178641551322642	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1769477674284	1.58059388295115
Merged-chr4-88115635-1	2.57566914173786	0	1.54200455260523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67398142-1	5.96586992655714	-0.58991041254784	0.853631768272797	-0.691059581511875	0.489528099054201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.85847887719124	2.33375244709663
Merged-chr2-22866078-1	1.10373006938563	0	1.60768364396289	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75688734-2	3.65750654342582	0	1.36770700260605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31697007-1	4.24828308336906	-1.59765669716692	0.825980791939594	-1.93425405621752	0.0530818990546995	0.614585506009459	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5798125855659	1.94207584056134
Merged-chr11-97440505-1	2.94377013278662	0	1.39569983507418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-109892855-2	3.48160840544323	0	1.37811910632395	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82903694-1	3.36646830451796	-1.67056331506091	1.03516086835656	-1.61382000240515	0.106566474588888	0.949041882810952	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30127498244712	0.765562747387088
Merged-chr13-98968762-1	3.59476166512564	0.0705246899759494	1.089325029055	0.0647416410115262	0.948379707616788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.57989517605929
Merged-chr11-20848502-1	1.9830763367384	0	1.44232355094213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33247328-1	3.51159542140404	0	1.40064998480794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41969834-1	4.14296742058469	-0.182617847688685	0.870878346435452	-0.20969386646958	0.833906612959187	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.41398715281163
Merged-chr10-36971474-1	1.66728236743036	0	1.53784105940255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35087844-1	2.93000155651255	-1.89841800747119	1.31042546900396	-1.44870353360437	0.147420393238433	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr6-98525469-1	1.78910074584823	0	1.53214675995008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118488407-2	3.06821862928024	0	1.4084711834733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44455855-2	3.27222686346316	0	1.37227272448469	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137644754-2	2.14436228315844	0	1.47074012772914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56720033-2	3.30521851061782	0	1.38182022296529	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126063081-1	2.252211060767	-0.680389929329327	1.50661717827205	-0.451601069695535	0.651556399263487	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr11-78746518-2	1.80958273334115	0	1.49280363503348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27109362-2	4.843901408624	-1.0426514528404	0.840852824057274	-1.23999280612439	0.214978054992632	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26292282237182	1.58059388295115
Merged-chr9-7254974-1	2.14791378957288	0	1.48394901507329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7829753-2	2.87734711234492	0	1.46575441095647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128644174-2	5.58480177425348	-1.18564657393814	0.857636657020136	-1.38245790246148	0.166831147856883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21068215388718	1.76574380159459
Merged-chr9-14003385-2	3.24414049501842	0	1.43413084507711	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128698720-2	2.91913702012388	0	1.37442933354132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73290811-2	3.36384821456397	0	1.45162656211652	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36238690-1	1.92283628561788	0	1.45224445097705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41554460-1	2.14627688586796	0	1.45793853523872	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59024841-3	3.37110585757764	0	1.38418975143831	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18664060-1	2.27772905613477	0	1.4122239198168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120501895-2	3.6838333439446	-0.853728074959622	0.764602332709545	-1.11656483172663	0.264180435571899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59274383422387	2.52248161300942
Merged-chr13-113865990-2	3.45489107791249	0	1.38131496615508	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124857547-1	2.92504408744202	-1.20465445992901	1.10632343882198	-1.08888089834898	0.276206410741722	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3412244690151	1.2636608194585
Merged-chr18-75692169-1	2.1304889413792	-0.194749483200693	1.12777303206354	-0.1726849974807	0.862899036901423	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	1.38572824442771
Merged-chr2-14633393-1	1.62394562733812	0	2.17295527180124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5015174-1	2.74906794310599	0	1.41396679730184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30266606-1	2.1475701816192	-0.513276177717702	1.56129300837455	-0.328750705322167	0.742344125232453	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82374999908923	1.61881475415901
Merged-chr3-69238690-1	2.23935309161046	0	1.44073080836369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86209452-1	2.54111073818881	-0.88047582214897	1.30897517134292	-0.672645166558553	0.501173059849219	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.55634759613363
Merged-chrX-13618748-1	1.00077922535764	0	1.59426093407271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35587112-1	1.49847257973876	0	1.6080814285987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22630107-1	2.28378047638137	-0.672960759336978	1.24194112673107	-0.541862045512807	0.587913544933055	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.723581231604105
Merged-chr2-61607154-1	2.54232403597382	0	1.38662384371976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55813195-2	2.24421634392416	0	1.50209951209584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75573953-1	2.71391479312614	-0.478344798414514	1.38000374321524	-0.346625725304214	0.728872516777636	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	1.60294768781932
Merged-chr2-52905325-1	2.30295666214511	0	1.48621129079674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53491378-1	2.62025127371708	-1.75801344812262	1.4562892105124	-1.20718703086735	0.227360123894396	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0
Merged-chr14-94735828-1	2.71184135185488	-0.604424452478783	1.13687627898094	-0.531653675649357	0.594965881673469	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55256080062263	2.50287224925689
Merged-chr5-137194570-2	7.07153290979578	1.38458170713765	0.669867287043718	2.06694928072713	0.038738933393465	0.497318705225666	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4627422823031	4.30737610236651
Merged-chr4-129774926-1	2.84996626867407	-0.457074848855999	1.09244515265956	-0.418396152651919	0.675657499041642	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	1.22903941979969
Merged-chr18-54970055-1	1.40934670105467	0	1.54515253925696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128713883-1	5.35639113278611	1.09016996443994	0.866542990378243	1.2580679510939	0.208367182661919	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75238521850622	2.94370155983827
Merged-chr11-8547965-1	4.4550934588877	0.726102947669836	1.03567670088489	0.70109035671986	0.483246628028029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30831180799264	2.40366870030388
Merged-chr11-8486323-1	1.47973520657187	0	1.58753672457963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57869732-1	1.93342549993522	0.114399695503829	1.38151540236486	0.0828073978096809	0.934004686731766	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38450684154311	1.10718024078827
Merged-chr14-65879983-1	1.48239890337955	0	1.64468568595426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25258585-1	2.46232002646758	-0.687435554247331	1.44625530888749	-0.47532102390423	0.634558176207289	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr16-38543574-1	1.30589889652614	0	1.62714019362098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70868243-1	5.24180568002859	-0.161715200746053	0.753874857585699	-0.214511996412706	0.830147812908481	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73403530842044	2.61752184385313
Merged-chr2-127501414-1	4.34073952593879	-0.771134475416733	0.959997547716252	-0.803267130474648	0.421820351940278	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54409787166574	2.71942640836769
Merged-chr4-117267506-2	2.61419007522975	0	1.43866997515358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9019638-1	1.98207750615414	-0.776246413696147	1.59498878102656	-0.486678290737908	0.62648633210177	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.465515277017237
Merged-chr11-99963090-1	1.38523520524164	0	1.61395510116306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48427250-1	7.25603874233404	0.526545901730026	0.693083308896116	0.759715166952531	0.447424860778592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37353465954841	3.95901543241158
Merged-chr4-32091316-1	3.58856205579411	0.0733460400819159	1.83408048805995	0.039990633213431	0.968100593933624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11051826775391	2.23129603196758
Merged-chr9-123683901-1	1.96925696782584	0	1.41945083518925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94891328-1	2.09213231184361	0	1.48637416075007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55028214-1	2.32239560788962	0	1.42957826696745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39917664-1	2.59584954401484	0	1.45410420323544	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-42964528-1	2.6076308441408	2.58413087132437	1.33740847185689	1.93219268884734	0.053335727249941	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.78395021584196
Merged-chr7-66354649-1	2.70020389040135	0	1.42605707784203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65205060-1	2.33953369258546	0	1.52004590280805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-50935278-1	2.39466322995268	0.591741693944132	1.33962978914935	0.441720316117994	0.658691606429064	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39665735086605	2.45854175169569
Merged-chr1-57989465-1	1.24808471243345	0	1.70286194739562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37545051-1	3.01828477857538	0	1.40138658710322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40835264-2	5.13559622590208	-0.693669745678746	0.953044843464157	-0.727845862066021	0.466707946610741	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88639437725876	1.18909650862134
Merged-chr11-97083111-2	4.0835000228018	0	1.41107422820433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-8412467-1	2.57393717933913	0	1.43316924542523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110963501-1	2.36250919627832	0	1.43608526323628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9646837-1	5.04745571230858	1.01581056465411	0.826695806045158	1.22875978954539	0.219161881787376	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22528317833176	3.66839784411194
Merged-chr9-56121287-2	2.41664759052943	0	1.4053287339499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36742118-1	1.53336511211529	0	1.49211213475907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-126498889-1	1.18946369281803	0	1.57058743497955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102795205-1	2.08787736461139	0	1.44565416194338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3628972-1	3.13522738804906	2.3318140330203	1.38482213414491	1.68383648378074	0.0922132742171109	0.86377260309693	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	3.34460592837106
Merged-chr2-181392825-1	3.90448554984617	0	1.39718398062009	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3451423-1	1.74391507980867	0	1.45367468386607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3781333-1	4.02399546303217	0.0191210097694857	0.872947685113698	0.0219039583878331	0.982524567196793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1552264446993	2.48022143839732
Merged-chr1-149965899-1	1.62602017888811	0	1.56232482366323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113471023-1	1.95634364146707	0	1.53879684291017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88149613-1	2.58423635449753	0	1.44827853836867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108761794-3	7.37446533665102	0.139181832495718	0.697788334342266	0.19946139200924	0.841901841229832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28742912540774	2.81334593156616
Merged-chr3-88610775-1	1.7427288401841	1.74167696560335	1.55556563884366	1.1196422202396	0.262866256289963	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr4-115903046-1	2.99215910725927	0	1.39490852985633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24902075-1	3.07716737104057	-0.0572985609384957	1.23777784366162	-0.0462914740572461	0.963077934742733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38327122822273	1.78657487140787
Merged-chr17-27569991-1	1.55151007878008	0	1.47394097471632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149802387-1	2.76153625199975	2.11668032857649	1.30275565945002	1.62477154731386	0.104211245773682	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.06633037676026
Merged-chr12-52618856-1	2.03254024302584	0.175858677844483	1.30383669820624	0.134877840212982	0.892708460380005	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	0.730937814817307
Merged-chr10-57584151-1	1.91225955418972	0	1.52035992593954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63847304-1	2.50650695780406	1.19042466309015	1.37035624355344	0.868697222850089	0.385012760829686	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.17858215524007
Merged-chr9-73091858-1	4.24742131231298	-0.675551911452217	0.883646581808359	-0.764504639478963	0.444566572962025	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84793875274919	2.00484654695269
Merged-chr4-95441073-1	1.89538265696178	0	1.43773661088972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9674819-1	3.0811429926948	0.399852426372703	1.14777968979073	0.34837036229976	0.727562057592023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.13759034240505
Merged-chr2-173361809-1	1.05865779204866	0	1.63956621883124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48818018-1	1.82516055260013	0	1.52843263551765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99257901-2	6.22092305204487	-0.0935032672076018	0.531755560539057	-0.175838814196535	0.860420575376603	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88464534392095	3.75832425829191
Merged-chr19-55935971-1	1.92103788722118	0	1.42983904924641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155481982-2	3.30223079831971	0	1.42076447399959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85897723-2	3.97652095685687	0	1.40403192806868	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45386917-2	2.80206944081106	0	1.40860126213891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145111167-1	11.264334290109	-0.144255481284996	0.534953485430335	-0.269659858686503	0.787421944941051	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48584948582594	4.38398200264589
Merged-chr14-64070882-3	3.12785372202513	0	1.40657910596843	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163968758-1	5.49402606315491	0.291186687285919	0.751442827511848	0.38750344886528	0.698383532165716	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96407117436956	2.73199680147298
Merged-chr11-94870491-1	1.35102410948418	0	1.58704911848162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46756056-2	3.00223252671724	0	1.42737456981503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3663617-2	2.50748466191358	0	1.40282284029299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115862994-1	3.88646455150762	3.4245677983361	1.14437786169645	2.9925148964866	0.00276689163511381	0.079748389391915	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.49764407500401
Merged-chr15-39975078-2	2.14411410698981	0	1.47086828316279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-94515498-1	2.19863192375182	0	1.47777224125439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75846457-2	3.03371900058702	0	1.40993896736607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32828505-1	6.96838079254004	-1.4497420446456	0.713471538495526	-2.03195497847416	0.0421582139429166	0.525976211090889	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84105562478759	2.27902262843667
Merged-chr10-127655476-3	3.38802176072996	0	1.37711202272592	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90744624-1	2.09403254329775	0	1.44876944531188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50110742-1	5.59752516241073	0.903200424030449	1.08453294772101	0.832801277202687	0.404956814310073	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.25298535761957
Merged-chr18-80280606-2	3.10097851650223	0	1.38351672067692	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84536056-1	2.2579051534664	0	1.44281725033317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113366150-2	7.36234614006076	-0.0926727575335013	0.694609174724863	-0.133417122758577	0.893863504461224	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90278323602149	2.87823799548939
Merged-chr18-56566108-2	7.38518074571129	0.388886741866595	0.699141461949081	0.556234700746325	0.578050420125585	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11736049306998	3.1438006055929
Merged-chr15-85331823-3	3.7120047396498	0	1.37572140688196	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27401741-1	2.49151404492968	0	1.43100014697716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-35839601-2	3.23607913468196	0	1.39055159281238	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20768568-2	5.98980645918668	0.412831423589222	0.819060881680786	0.504030204375106	0.614240151981304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27874693941374	2.5595595276028
Merged-chrX-99197783-2	2.98311147640925	0	1.42492649690465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-79508036-1	2.27359191608004	0	1.4028736948952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-81996339-3	3.72283921676338	0	1.38130886191591	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121241964-1	3.5969364309882	3.74356451668619	1.14923310831171	3.2574457606653	0.00112419740494925	0.0392991940422098	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.51461015710889
Merged-chr17-48424962-2	5.3406004939177	-1.06565542924448	1.51330814053754	-0.704189319212909	0.481314881656252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2411634522919	1.73861933677606
Merged-chr11-96407916-1	1.98200731231613	0	1.44825085948101	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167049819-2	3.76869914583996	-1.58507729578579	1.27135275839126	-1.24676435027483	0.212483915706285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.33962963608869	0.413263464506793
Merged-chr6-108505563-1	2.37837211398957	0	1.45857090534838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10744031-3	3.40322434658776	0	1.39063738820898	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-83056599-1	4.19370377729283	-1.40502262377835	1.07588762624703	-1.30591949335771	0.19157993675286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89200393807192	0.724326877898254
Merged-chr13-75786952-1	3.94712712532171	-1.06871757312533	0.900223587746496	-1.18716904074977	0.2351609499373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78213226264952	1.85449916425446
Merged-chrX-23321164-2	2.3129417990072	0	1.42358864735035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120101252-1	2.26040723344052	0	1.4430992092702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-36561854-1	1.62374267872517	0	1.46229925775143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36244014-1	2.29564597767934	0	1.4395127388947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-31863226-1	4.81963064305152	-0.744892933684937	1.17098545788575	-0.636124837134925	0.524695058193053	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	0.67591700901439
Merged-chr10-87721137-1	4.74145036903959	-0.233018153685299	0.937759113094881	-0.248484019436793	0.803759933071893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	1.51226750748471
Merged-chr19-45333177-1	3.6296961171655	-3.19945373205417	1.14933273983112	-2.78374888417805	0.0053734618755401	0.130225597009578	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17428146954453	0.303163067301871
Merged-chr12-55020343-1	3.70445548239167	-1.25993001988376	0.922736606048189	-1.36542758965603	0.172118697338458	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45708220433195	2.48006350679436
Merged-chr7-145001698-1	3.04625081624402	-1.1493152907868	0.843536364178933	-1.36249643713404	0.173041267791862	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60516207451923	1.54667940924561
Merged-chrX-53693401-1	2.37805674948555	0	1.43738860206257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26714891-1	1.97240492051221	0	1.49477403567017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16384123-1	1.0379205874779	0	2.01491737619453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111597568-1	1.82410715440228	0	1.47946223223189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102893135-1	2.35325560448988	0	1.42216994384655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106378634-1	3.61055409294913	-0.62166862838515	1.16793414417592	-0.532280549794004	0.594531701356218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.08918047352118
Merged-chr3-9782603-1	1.04814832050085	0	1.68541550502943	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95363992-1	3.52075433190243	1.80219724560072	1.34692938902201	1.33800424898983	0.180895051699494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	3.34300074830813
Merged-chr11-49695211-1	1.3774077361432	0	1.65793650808245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103112430-1	1.24505410862655	0	1.48952971813955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35131314-1	1.53444847815909	-1.89791649199015	1.72870895728561	-1.09788086883649	0.272256512855636	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr3-96052165-1	3.1087842176099	0	1.46852533666957	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27727123-1	2.4206385313891	0	1.43684509147335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127945549-1	1.87726755211435	0	1.44768703145072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57217669-1	1.51418270262582	0	1.57028602386568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104371293-1	2.8854882333584	0	1.38710269830454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156003322-1	3.27810160477486	-0.494719423872278	1.05350571014615	-0.469593490673767	0.63864547615619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99468681090207	1.45526469271556
Merged-chr1-161259482-1	2.63400409527163	2.22063785263957	1.26229796530586	1.7592025921562	0.0785431041502419	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.38010144042985
Merged-chr16-51640964-1	2.98505689310332	0.919349521913955	1.8881509687915	0.486904668699441	0.626325890235682	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46890512470268	3.09239310606915
Merged-chr8-94493032-1	3.57110004545925	2.00389456966683	1.26884656920563	1.5793040847495	0.1142663253863	0.987378993431135	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.62550687004702
Merged-chrX-36103790-1	2.06136724318398	0	1.54795544742114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77704916-1	4.52650022966465	-0.428276646818159	1.15488534586579	-0.370839103943335	0.710757373989059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	0.723581231604105
Merged-chr12-83502431-1	1.67754856097472	0	1.48310488080201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121387559-1	2.20894116756118	-0.846552097130686	1.54649371050155	-0.547400931139988	0.584103315715615	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	1.17882621189388
Merged-chr3-116414662-1	1.1517041962492	0	1.81714928915268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96236226-1	2.52834718856991	0	1.4283006083111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167783630-1	1.76947526453257	0	1.59890891453141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116211842-1	1.9697151976889	0	1.4707729581158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5333137-1	2.76857901280401	0.050249135035924	0.981044062718701	0.0512200592669323	0.959150167839436	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.86575916392988
Merged-chr14-46101035-1	3.2965084432219	-2.22190616202023	1.22715029523755	-1.81062268464036	0.0701992782613813	0.73328538564295	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61691174577224	0.679405493272835
Merged-chr2-159607778-1	2.29575150840187	0	1.4721389902466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124028041-1	6.59154582138442	0.972912736558082	0.671796643325651	1.4482250636767	0.147554117189367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91157833022862	3.06765199052414
Merged-chr5-99469551-1	1.66085302523199	-2.90555431540567	1.66037526516113	-1.74993832802231	0.0801289560876744	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.100976607917	0.55634759613363
Merged-chr12-54835764-1	3.66915844589274	-0.682944768389132	1.40476400889932	-0.486163344207717	0.626851358291425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.303163067301871
Merged-chr4-66530883-1	2.15045879416451	-2.5854275759261	2.350898738636	-1.09976135230145	0.27143611538232	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41736426458231	0.67591700901439
Merged-chr1-107566627-1	1.5431989197415	0	1.5933035616689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49843513-1	1.63769107478717	0	1.59417769333178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22625003-1	2.22799514560658	0	1.51799881105089	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114916068-1	2.04870599120784	0	1.43482563622903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41334055-1	4.16224205493156	0.812793879338802	0.933275760176949	0.87090430719501	0.383806404816881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.80346354702228
Merged-chr1-52858385-1	4.42264660861153	0.476172677970327	0.874215611613163	0.54468562634298	0.585969752241551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57928534738074	2.05996425538702
Merged-chr14-66194460-1	1.81967738995838	0	1.48467163917887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155047014-2	3.59707693056383	0.909697102476942	1.29593845644999	0.701960110797934	0.482704040015486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.815775955292901
Merged-chr5-99332241-1	2.1914917305204	0	1.43805479996813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92410774-1	3.07965224566343	0	1.39700909091245	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118585987-1	1.95266398190669	0	1.54928019638631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36511505-1	2.27338344285122	-1.4403048552396	1.32621647519874	-1.08602545826748	0.277467729083831	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	0.465515277017237
Merged-chr9-45462841-1	1.51855608050444	-1.59044075206618	2.2894718863109	-0.694675816539031	0.487258486861356	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr16-36067604-1	2.44022796811475	0	1.44853719325009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43845798-2	8.24375951741694	-0.785516961684482	0.667960075635783	-1.1759938809768	0.239597321257373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.23925211617863	2.81423103972428
Merged-chr16-28912357-2	6.33391104839895	-0.153972806126519	0.887040320860972	-0.173580391449479	0.862195243422016	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83995505205827	1.73130600002542
Merged-chr15-57881003-2	3.42593425010137	0	1.46893733508286	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119667574-1	2.27204006147487	0	1.39479731396523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50374819-2	5.61366950337791	2.2710507733426	0.889549462740151	2.55303484344412	0.0106788812637807	0.210171363728406	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65215194967867	3.86418814686641
Merged-chr2-142889914-2	1.85391694677557	0	1.45272825341822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120300984-2	3.02060114233012	0	1.40911313279077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-49103476-1	3.23227478404476	0	1.39108423527448	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-155171905-1	1.82616597569198	0	1.46487640738712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106098532-1	2.57517407246859	0	1.38883943480646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60761701-2	3.33748103399104	-2.20962149906894	1.13118315903604	-1.95337199057305	0.0507755326769362	0.595107197237079	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35635186263844	1.11816745933907
Merged-chr10-127595476-1	3.23864300608338	0	1.40913965042537	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90059527-1	2.52500221010973	0	1.47840791908016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57026055-2	4.37068009517118	-0.574324131362318	0.933160958824909	-0.615460951222756	0.538250349653787	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09304857822224	1.46460328489499
Merged-chr8-105546652-1	2.59016665645913	0	1.40072433632743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96624651-2	2.95597341188464	0	1.55378459185199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39470589-1	1.35648413976752	0	1.57679344694004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20049810-4	6.87520582830549	0.421759981553086	0.706269041567536	0.597166174262724	0.550396440381245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89082683942207	2.28037924018789
Merged-chr3-90117875-3	2.51991561946078	0	1.39864697503254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89379325-1	2.4409943898725	0.350715722593839	1.07439474217611	0.326430974414013	0.744098305667217	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26428495695095	1.80179175376942
Merged-chr6-128630646-1	3.60279557197913	2.03799125003285	1.1769218486076	1.73162835955843	0.0833397534939977	0.81450685852422	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.55469575053842
Merged-chr2-117361174-2	4.73903736484265	1.78497645181258	1.30913406395781	1.36347873067804	0.172731683224571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr7-91675631-1	2.71551810936416	-0.0342202208881587	1.43031035886849	-0.0239250318477943	0.980912407468368	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr11-23763625-1	2.05550281569076	0	1.44385477309355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101539568-1	1.70230159421481	0	1.58647509070989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24734961-1	3.19366866572402	-3.38666870056173	1.30006062899915	-2.60500827809003	0.00918720402272875	0.189600312631554	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89082683942207	0
Merged-chr10-117810002-1	1.14364046563485	0	1.63460157801122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93940550-1	6.86099992944863	-0.866148198779842	0.806402392303703	-1.07408932196426	0.282782649912181	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50058657781377	2.37977331127176
Merged-chr12-40508051-1	1.31833187383443	0	1.59749265325982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82789378-1	1.91948333988413	-0.629949351087893	1.55560701044235	-0.404954044857874	0.685511291022741	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.376242425970964
Merged-chr7-122453989-1	1.40780927074224	0	1.72156513092777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27709133-1	3.43431413337389	0	1.37667134011159	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32057292-2	5.51656613165957	0.973539574707878	0.728902341719994	1.33562415564561	0.181672150666973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82361065065357	3.03878193165035
Merged-chr7-28467576-1	1.97853728804148	0	1.40619579266512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31941749-1	1.94828398204972	-2.04167363260388	1.33044832806703	-1.53457566861704	0.124888093120376	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.413263464506793
Merged-chr4-77923070-1	3.31115435210806	1.55142117951521	1.03324321916232	1.50150627726644	0.133224664321428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82166021832917	2.98656547140931
Merged-chr9-32906492-1	3.30292196704887	-0.877637902885378	1.25432726797708	-0.699688131870714	0.484122089803908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.577068348605183
Merged-chr5-140763421-1	1.81748643049308	0	1.47026810060982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7911164-1	1.3792599660104	0	1.57520016872287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104039743-1	2.11912515930627	0	1.43266421661376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90413462-1	1.8540624559624	0	1.44366287999342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121404825-1	1.00041486421628	0	1.60991949261559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137160056-1	1.41301852241864	1.47642043949327	1.85198482649295	0.797209792635897	0.425329199675142	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02748994520012
Merged-chr12-57281622-1	1.17523373092479	0	1.60873093810361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64683574-1	1.45696080653757	0	1.45941181022567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75217984-1	2.56936540120104	0	1.41481223310981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103722748-2	3.045564904022	0	1.39500083097961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139313615-1	2.04253876784674	0	1.4378086088014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-52107235-1	5.46671223633732	0.431319558922475	0.862286327684071	0.500204566713836	0.616931043125358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	1.96407541330571
Merged-chr7-127760324-1	2.34366539550115	0	1.47604950607744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23237894-1	2.49149746466289	0	1.38639164974248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141419231-1	1.67615967581222	0	1.49723056715802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24882188-1	1.68413846889765	0	1.58910129396782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145337292-1	3.91485266070295	-0.00786457978213914	0.942976673401955	-0.00834016365830798	0.993345589327505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86128175887696	2.94273670372734
Merged-chr19-56254794-1	3.04077648075874	0	1.41078848825175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19153837-1	2.08386204125581	0	1.4730563617925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99303100-1	2.19683923214382	0	1.45988814261208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53534169-1	1.60394777190467	0	1.67868722929931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-38750084-1	2.21279056241992	-4.59120314251859	1.45871720655759	-3.14742509506234	0.0016471530252198	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22030092573404	0
Merged-chr4-129036659-2	3.11291721350879	0	1.4454986964973	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121423581-1	5.28589006380744	-0.468756888113616	0.800762611146148	-0.585388080797971	0.558286801375953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99307967075751	2.56025605044543
Merged-chr8-83138969-1	3.67048056102418	0.346726632340541	1.13635981304847	0.305120463042768	0.760274406604817	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90990595114556	2.28284312426037
Merged-chr2-129378384-1	2.19153478360677	0.152320676174295	0.98464923735022	0.154695368052287	0.877061481794664	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42763579811059	2.09965233491124
Merged-chr3-135674831-1	2.20686200080879	0	1.65609751364265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25197441-1	3.04108541059872	0	1.39253112276356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95688299-1	3.34265545688046	0	1.41588843854943	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68442935-1	1.84408585784573	0	1.41077018778823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4405555-1	1.02670632178083	0	1.57419168678426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59919635-1	1.55363054831236	0	1.51890293430756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75282335-1	1.45941202814773	0	1.47114593694706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84794588-1	1.96237684373381	0	1.56179506664782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-40144364-1	1.6479973730299	0	1.48078064226812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31505015-1	4.19095805939406	0.189284223113705	0.933395521590645	0.202791012743597	0.839298382781968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56485155503272	1.84209355959446
Merged-chr7-71873419-1	3.92155944268053	-0.678720501226246	0.904283274870451	-0.750561820712077	0.452916405557219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31193049927473	1.41398715281163
Merged-chr13-20103393-1	3.9334123659752	0.544953730860494	1.38595085979492	0.393198450730879	0.694172913895801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.1442012793241
Merged-chr17-47526795-1	1.51017641975803	0	1.49980487293086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171193078-1	3.08757037470819	-0.0311731324025578	1.27631234502564	-0.0244243758387619	0.980514105015812	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr13-117997273-1	3.28803609617341	0.822245128324627	1.05401694845711	0.780106173366798	0.435328383047513	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84568063312508	3.63252784035307
Merged-chr10-7846088-1	2.02006626378134	0	1.49467115976972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23757126-1	3.94621944879462	0.786283047706655	1.11419123202304	0.705698469982569	0.480375672667427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55707181745548	3.23365829305427
Merged-chr19-29418694-1	1.79249642490334	0	1.48127863472069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-140976932-1	2.5961582795862	0	1.41627223480058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-112287485-1	1.72213292342004	2.34306988736626	1.78260215918841	1.3144098784403	0.188708307927009	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.21849460895724
Merged-chr19-46609303-1	3.04159906293501	0.529433396387015	1.45068627958007	0.364953749021649	0.715145931367096	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.465515277017237
Merged-chr7-135768430-1	3.67419865192606	0	1.38185840766007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-56000440-1	2.10522424047817	0	1.51407460214851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142400249-1	2.46668390719404	1.82747119678607	1.4055581290359	1.30017475551835	0.193541080760309	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.977057525713991
Merged-chr14-51242964-1	2.45167638703067	-2.24709467698821	1.26879641669896	-1.77104431208475	0.0765533332809412	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.41385117919798
Merged-chr16-20803373-1	1.24113624707825	0	1.58394599577299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5073818-1	2.05086837154749	0	1.46181735547141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91068035-1	1.72748367774566	0	1.56079519203398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-43327307-1	2.21687362534485	0	1.47896371500734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125564720-1	2.746993489692	-0.266214894028119	1.45379446861457	-0.183117283615623	0.854705994703176	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90990595114556	1.61412912633251
Merged-chr12-112562746-1	2.83470102076653	0	1.3808703581057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99154713-1	1.05551722498966	0	1.64776122440949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152615732-1	2.42733727911831	0	1.399125503676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20257327-1	1.81327724184635	0	1.54610737390742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31135465-1	3.01297130183998	0	1.39486601634193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-60919831-1	2.7578818338193	-0.352934857093637	1.38610803659696	-0.254622906566596	0.799014365305556	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88970570680704	2.49402744874504
Merged-chr7-125541595-1	4.14850544013788	2.51913190214135	0.922362527746219	2.73117329288823	0.00631092779544738	0.144749250646719	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	3.17512962867357
Merged-chr15-31648157-1	1.75805054422904	0	1.53119983516753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44422842-1	3.95789231130509	0.340407417211536	1.02884694334876	0.330863030125313	0.740747948320371	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34943197691497	2.86604865976509
Merged-chr4-107084410-1	2.04911490682084	0	1.49520548479145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127738960-1	2.31611340109381	0.186377733560516	1.44825739595312	0.128691028322254	0.89760213473795	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.20253745507858
Merged-chr13-34643147-2	2.45134424034983	0	1.42248179320007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102102035-2	2.93365251444328	0	1.39988388620363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-98041873-3	2.91674090146443	0	1.41351506456092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6258174-2	6.02093281321467	-0.962833472836768	0.736193154663111	-1.3078544220876	0.190922691151993	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92269452602859	1.85416539408747
Merged-chr8-61578571-1	5.5838227132945	0.384469300650591	0.710346491728517	0.541241922255497	0.588340845479209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6960750002622	2.97578009132835
Merged-chr9-99376786-3	8.2063279564804	0.127074625175148	0.642858684821286	0.197671165025132	0.843302351507383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79480127480766	3.84880442983646
Merged-chr11-79461225-2	5.91341960630927	0.0753480874055559	0.704987946717716	0.106878547011139	0.914885332695677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16286647593625	2.22377753961315
Merged-chr19-5812212-2	3.01222985322148	0	1.40248177623353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-89135581-2	1.98918375732504	0	1.5042326171161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133154226-1	5.79538629658272	-0.475317354640826	0.649605456808382	-0.731701603887594	0.464350717257116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61614301958518	3.31166238291653
Merged-chr17-47260753-2	2.11938367591076	1.18148224763308	1.47594547718784	0.800491797220172	0.423425914223098	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr3-137820947-1	3.76997549380326	-0.783905299423267	1.23828922241434	-0.633055093457778	0.526697666062971	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.600815099743027
Merged-chr12-30257812-2	4.07701219472156	0.300263318190528	0.850299437635185	0.353126563302931	0.72399355944674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	1.61141823534019
Merged-chr5-105062124-1	3.2331103926676	-1.56536697366853	1.09360431731769	-1.43138331559257	0.152320387461327	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52944205045577	0.577068348605183
Merged-chr3-157884244-2	2.09819754244191	0	1.49096534134375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165969648-2	2.91333183853523	0	1.376600566192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75599194-2	3.69389935200089	1.66819488869095	1.16183814831036	1.43582382031179	0.151052479884057	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.88144263437262
Merged-chr11-74546379-1	5.94714779252146	-0.060933131607523	0.67213758211167	-0.0906557425580756	0.927766138082982	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7312500299248	3.26619118338657
Merged-chr4-33148056-1	2.74278978819529	0	1.38792301617948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125596399-1	2.19009809365648	0	1.39782242273236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142877497-3	3.91542970867442	0	1.37445159779049	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93191165-1	3.83936981570592	1.15845284237481	0.9262312869444	1.25071659606371	0.211037893329989	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	2.24986710229783
Merged-chr11-111282501-2	3.14654881881672	-1.97491763265093	0.986049450731458	-2.00285861037286	0.0451924667528388	0.551058165145259	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	0.577068348605183
Merged-chr10-42636985-2	2.46203692524065	0	1.4060561466887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-71209874-2	4.37319632121963	-1.80320742846014	1.02832122572632	-1.75354488786955	0.0795085215597516	0.790845740852221	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20023722099316	1.56163052678955
Merged-chr1-94532955-1	1.42071929036001	0	1.60438870250489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104574278-1	2.21217468144561	1.60284663905316	1.46125164986448	1.09689979765075	0.272685197221919	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr7-130709649-1	2.07301975699404	0	1.56409438588521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148499732-1	2.76256181747726	-0.0298210500899303	1.35784476254066	-0.0219620467026968	0.982478230573817	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.577068348605183
Merged-chr8-124923262-1	2.60722183886314	-1.41957039788153	1.55308264179439	-0.914034037648761	0.360698960701395	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.55634759613363
Merged-chr16-92412171-2	3.46618665256013	0	1.39422422614779	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25444374-1	1.90613701166576	0	1.54556784463884	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74764331-2	2.54963847850789	0	1.43738035349192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84071944-1	8.51451132135421	-0.115293351131981	0.57760948896866	-0.19960432322163	0.841790046385094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.82054540311108	3.62070948266928
Merged-chr2-73206171-1	1.99557064562859	0	1.40565316294076	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117263989-1	2.35334888812608	0	1.40982604164833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46072237-1	1.69249233182273	0	1.4751466050018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171257381-1	5.64845351675073	0.0502793671332928	0.829422565627092	0.0606197241514386	0.951662064809802	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37475311282297	2.37780912716683
Merged-chr5-24208155-1	3.67631739944217	4.02458246608463	1.18936853097271	3.38379767185633	0.000714906646342808	0.0278936678371371	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	3.97917201983421
Merged-chr6-121179211-2	2.7836772919232	0	1.39993551265997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59243229-1	2.28872322410466	0.156078171166731	1.23611244814241	0.126265350212499	0.89952188322282	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65288709737369	1.64474942565565
Merged-chr7-44300136-1	1.46793051571468	0	1.69413818195761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-55257150-1	3.59311954705921	-1.46884947598439	1.2638316087265	-1.16221929079972	0.245146400690087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.303163067301871
Merged-chr2-29670366-2	2.70986725102255	0	1.40987280281401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35727104-1	4.00418731821295	1.42561131230275	0.988901869170046	1.44161049417292	0.149412286298745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70275322934241	3.90486815082846
Merged-chr11-49829631-1	2.05339968751213	0	1.51614648563676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86263662-1	2.49458316406465	0	1.42989065132548	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115346354-1	1.90612729600804	0	1.44264466609803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13168936-1	2.01659769002162	-1.15846211706723	1.40332314853594	-0.825513438067223	0.409080156646237	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	0.724326877898254
Merged-chr6-16828520-1	1.82686961985776	0	1.53246389164096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44498297-1	2.52627498358469	-0.681721566836929	1.49550137698379	-0.455848170606076	0.64849916202006	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr3-149291488-1	1.45378975314557	0	1.54569641733983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22046140-1	1.81452714225673	0	1.44531369903047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28800841-1	5.21899889263573	0.552930298446688	0.842192973190517	0.656536347426406	0.511479088889754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71981624271829	3.76443348232357
Merged-chr8-3313591-1	5.35544289968984	-0.39702710592432	0.783509267846533	-0.506729303937329	0.612344766391516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37475311282297	2.0560328530563
Merged-chr16-43458804-1	1.29933985703325	0	1.98335751742527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-55040590-1	2.03728502831616	0	1.44995532330203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-62691374-1	1.7477562087278	0	1.47001983301469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184700905-1	1.16897870075508	0	1.7273888990213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132571343-1	1.99935424841961	0	1.44842445952303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124079960-1	3.0265184040452	0	1.44282836853178	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76442213-1	0.922992396107351	0	1.96854235523712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109415624-1	3.73600762639848	-0.79372685225107	1.22440911511639	-0.648252975620504	0.516821343184628	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77513915217697	2.32641377138321
Merged-chr9-89066992-1	2.43856892089872	-4.01640801713176	1.2430343130485	-3.23113205723313	0.00123300958725204	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91601014191884	0
Merged-chr17-13877554-1	1.64441726399635	0	1.4651124214004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143996187-1	2.39597561440199	0	1.46518413817634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-74001307-1	1.3212923458652	0	1.58724469914661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132791410-1	1.48305318169628	0	1.64884438956615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108283010-1	5.22053731711789	-0.506807161650075	0.889924163209893	-0.569494775624541	0.569020415161854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85989208496043	1.55008632225961
Merged-chr5-64626547-1	6.44229118225506	-0.68836999250471	0.709751531461381	-0.969874613848812	0.332108995320009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6597719732411	1.98955214289444
Merged-chr19-56599021-1	1.41136169945367	0	1.49867015367318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153807657-1	2.93523030078951	0	1.41802547418572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52924060-1	1.67081685227909	1.07537805140799	1.68959157009524	0.636472192713043	0.524468699762148	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chrX-50619779-1	0.861656611787097	0	1.7517689818932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131905977-1	2.25755503406993	0	1.45776650786023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90922826-1	1.63052258143001	0	1.75559074951221	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142385461-1	1.99043097934052	0	1.43721255121404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-4610059-1	2.9229841223403	3.25179193372252	1.49688545255785	2.1723719260989	0.029827620789888	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	3.33738869597124
Merged-chr10-98796987-1	2.01230805010402	0	1.45339854728475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-176248284-1	1.62053983657345	0.58187063473518	1.43256446077812	0.406174137824924	0.684614655171436	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.71701424649985
Merged-chr7-81295445-1	1.26376813951277	0	1.49672164844493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70470390-1	1.73065715457493	0	1.44072677434204	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64979837-2	4.01908974198533	0	1.52506472089118	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32231320-1	1.85275350094628	-0.747756844989986	1.45931110526638	-0.512403998223184	0.608368293335322	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.465515277017237
Merged-chr4-140789166-1	3.99215084913042	0.672302640423443	0.949173693809708	0.708303069088456	0.478757071610305	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.68297728031423	2.73764364103053
Merged-chr2-137019819-1	1.38615185612539	0	1.56145059270826	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131712558-2	10.065657893072	0.269263467245336	0.598430251363038	0.44994962509338	0.652746764011662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.97892346624957	4.0439079675426
Merged-chr14-77833361-2	4.70751701237651	-0.302326867665206	1.15156706791771	-0.262535180180065	0.792908866380433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58787129527193	2.28493536125766
Merged-chr18-32473248-1	1.84197223174485	0	1.45956273952181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139015300-1	2.02289121587348	0	1.48852836560599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109585195-1	2.05251777025579	0	1.47673092755209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60635769-1	4.09122993372823	-0.15933122746717	0.972634561650265	-0.163814071337166	0.869877514000145	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12736629702302	3.5607018741002
Merged-chr8-122911714-3	3.15374828178329	0	1.40908047136252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55067387-2	4.58929271979657	-1.35932935916854	0.937781117918117	-1.44951666566529	0.147193349615587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24287124256397	0.765562747387088
Merged-chr9-46218344-1	2.2621928651328	0	1.51367757416482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97243161-1	2.69287097151267	0	1.40091635344176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141762406-1	3.98666351343159	0.0636070720127424	0.873078465191979	0.0728537863990907	0.941922469276445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15961505864417	2.14883028460928
Merged-chr7-122347582-1	2.52251814316905	0	1.40816660779512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17286591-1	2.5656763258053	0	1.42264857318126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45769939-2	5.07243697288779	0.436007926692624	0.798933527667002	0.545737425697765	0.585246441836972	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14625477824554	2.51843726321327
Merged-chr2-103495811-2	3.92323791690663	-0.100538876640754	0.880250528100953	-0.11421620712646	0.909066404554941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	1.87845446409297
Merged-chr10-67247361-1	2.9742163748279	0	1.41076309969799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128579352-1	4.1826527102585	3.3301188861564	1.15620018027041	2.88022692175809	0.00397389037802155	0.104557941461217	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.12382511851675
Merged-chr11-69269815-2	2.05321286944225	0	1.51441562492454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114953527-2	6.18007826640129	1.87261476268359	0.877734557792684	2.13346363779139	0.0328867114856682	0.44961990685348	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	3.98755332411054
Merged-chr9-63918438-1	2.30475216809632	0	1.41438218683075	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-145253714-1	6.72208992333768	0.357714484060721	0.712038545559933	0.502380785831505	0.615399692132963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6152272148897	3.66413855631201
Merged-chr16-95886358-2	1.78649478078284	0	1.53896908699633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118849123-1	2.08437827915628	0	1.49845668473594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88469074-2	5.79811480076974	-0.981461579637612	0.871524825285493	-1.1261429980679	0.260104996457767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03929583948814	3.05072755119371
Merged-chr10-80939390-2	4.84637374665589	0	1.3957796905925	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23827263-1	2.52190835928437	0	1.40845501868887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-114863419-1	1.91247451090434	0	1.45855545650723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102239374-2	2.91940030390022	0	1.37874092559822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84826584-2	5.11158034216986	1.63294424077273	1.01222736973554	1.61321881782287	0.106696976548227	0.949253837673494	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.13118170172995
Merged-chr6-134434235-1	3.53026248374131	2.46239130721418	1.25700044060941	1.95894227850898	0.050119546996726	0.590491629533913	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.79305269258721
Merged-chr19-3581633-2	5.15937116502081	-0.540956272847319	1.02603742011345	-0.527228600285851	0.598034849863018	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0.730937814817307
Merged-chr19-32788916-1	8.14669242483721	-0.299260777441733	0.515083543975891	-0.58099463852361	0.56124406702041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78600629199586	3.36156581481377
Merged-chr7-118797799-3	5.27920956526408	0.797852918055257	0.917637807374587	0.869463868689062	0.384593462324071	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	1.95720824132453
Merged-chr3-8778900-2	2.27371111000401	0	1.44850194689235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5008158-2	2.1793005946673	0	1.48801863000399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102352212-1	4.40810418124769	-0.698831487270895	0.959213533122461	-0.728546317519143	0.4662792263489	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37265460597716	2.9777960824703
Merged-chr17-8214140-1	1.51486889998338	0	1.57366543806811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129112711-1	4.39557036239561	0.720801795434829	0.965276921705614	0.74673057982283	0.455226206975303	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.6794096906117
Merged-chr19-34726479-1	1.8035552744866	0	1.47230862833905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94991804-1	1.07175000317197	0	1.52877873534049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77694395-1	2.99822707957516	0.365142342758903	1.34834812841204	0.270807171430522	0.786539343912004	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.52554022439958
Merged-chr1-140180279-1	2.128485130733	0	1.41236505990002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-63257992-2	4.63682299591268	0.0872679217827663	0.756190448606111	0.115404686668058	0.908124364360486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86712324292347	3.88974187372465
Merged-chr13-36190779-1	2.11884702863364	0	1.43216414124495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32939367-1	2.09501473140455	0	1.45985613908287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44387388-1	1.82392548721078	0.505678965626426	1.54159831110125	0.328022521810621	0.742894633974587	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.465515277017237
Merged-chrX-108816116-1	2.01631305432996	0	1.48591569835911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94073486-2	2.76570563451191	0	1.38107309135722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97859160-2	6.40337667425324	1.75590345027889	0.74825887547259	2.34665235232912	0.018942920071074	0.309224682325378	C57BL6J_F1_Control-BALBCJ_F1_Control	2.14242223062423	4.0891408009559
Merged-chr17-32073501-1	2.56008671953716	-0.0336202656092665	1.35531010535687	-0.0248063269626503	0.980209444426205	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chrX-86949283-1	2.49268874149845	0	1.41909791775563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43654586-1	1.45375053000708	0	1.51359296597364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64624461-1	1.94248596976424	0	1.53205608222703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58272483-1	2.89124438594559	0	1.41559016964081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129318193-1	3.90549078086699	0.314657709275043	1.17886407489592	0.266916021936476	0.789533820327439	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38601560292234	1.83763882844377
Merged-chr2-90517633-2	5.59720841614104	0.557127216433384	0.984651129977406	0.565811788025032	0.571521732205496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27465395918041	1.25056711339808
Merged-chr12-16805724-1	2.4284897478741	0	1.44625504229796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99226768-1	1.91007679032503	0	1.6432838664835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11000148-1	3.71331557656982	1.98582792061685	1.17476382954964	1.69040608049546	0.0909502925787288	0.856691553333411	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.21849460895724
Merged-chr4-126227579-2	4.34820907912709	-0.780539724303408	1.11519694635966	-0.699911999267328	0.483982263288636	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15658857927843	1.01477727114168
Merged-chr3-81466714-1	2.62414111001611	-0.351716552898312	1.53866982151601	-0.228584812660962	0.819191629807198	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	1.25171540477662
Merged-chr17-12036362-1	4.75449929304189	0.912422997461587	0.715402681400434	1.27539778810372	0.202168481190226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24517688100283	2.7950911695638
Merged-chr13-45623929-1	2.10428908886099	0	1.57170027169379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94276305-1	2.28918773692676	2.65746739437461	1.59566839857419	1.66542584709279	0.0958278262840195	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.71932429967841
Merged-chr9-108404607-1	2.49058180763691	0	1.4013626727845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101006420-1	2.37264532142314	0	1.46999414630552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108718014-1	2.36930016480909	0	1.44248091070974	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51087898-1	2.03186707240626	0	1.56040209104696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35595970-1	1.8110211197473	0	1.51926365199443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121824762-1	4.00430415361426	-0.0740629449995796	0.896773660335851	-0.082588225184761	0.934178964229308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15292080626044	1.62144175773092
Merged-chr11-53809572-2	2.53572966525013	0	1.45765145729033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99207715-1	1.52332750251005	0	1.71903449793066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84936531-1	1.15170536988979	0	1.56329002158861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106410882-1	1.65942070906147	0	1.625961223343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56821311-1	1.4231528693869	0	1.45707032749071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94252171-1	1.8670330279097	0	1.51862987636396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-90294207-1	2.45664748662522	0	1.46071945432016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35030151-1	2.17291026582808	0	1.55566950070522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65543500-1	1.62734075988749	0	1.71095973492139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26836235-1	1.78709404908536	0	1.58761527165934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94844531-1	3.07586937079524	-3.10656878884443	1.19578506126827	-2.59793242905171	0.00937869475269365	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.51144536133504	0
Merged-chr14-63126005-1	2.3418771922418	0	1.44488334761948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30180634-1	3.71846643039624	0.621469257439512	1.3425139115336	0.462914575484425	0.643425599539736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.724326877898254
Merged-chr18-75371665-1	1.38992240989508	0	1.58756971098897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32708836-1	2.89326175524405	0	1.39505156554565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84277933-1	3.24875811998007	0.466193455175693	1.07079123268011	0.435372872832405	0.663291797470318	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64096746093439	3.39119088517955
Merged-chr10-111064233-1	2.77606981454351	2.01525042716948	1.20257498378061	1.67577943525318	0.0937814036833192	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62581156516825	3.53969838982955
Merged-chr6-31660991-1	1.49089018115359	0	1.52552809886932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-74641749-1	1.87154024279661	0	1.51058822372329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79371647-2	2.44104063644971	0	1.43503877921706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14897288-1	1.91693195484409	0	1.50556782360317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11003331-1	1.02716558177132	0	1.81853853835878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90185214-1	1.47341418002471	0	1.50788091387491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35889238-1	2.02864954690693	0	1.41815390159975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116289634-1	2.58095039210873	-1.77696548117021	1.18251727614311	-1.50269726880097	0.132917127349233	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03774089809133	2.07061327422338
Merged-chr7-39553967-1	4.34491250905816	0.943601770048449	0.803930322909566	1.17373576186726	0.240500881285336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69895031910627	3.27643016326093
Merged-chr12-34661577-1	4.92187690429746	-0.228650565024963	0.654363251848699	-0.349424519758685	0.726770627933537	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77812499375419	3.09845917474703
Merged-chr15-88867299-1	2.61783438151126	0	1.43692512769712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70851677-1	1.52750036245795	0	1.52961502877103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45453493-1	1.77702984244803	0	1.71649914207234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79883811-1	3.13678840084602	2.69583625248253	1.29381691761542	2.08363039297022	0.0371938002111546	0.484842987745694	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.62518823153097
Merged-chr6-140682963-1	2.24226428142502	0	1.43073640333719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99018220-1	1.34368820382283	0	1.60179387578722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-61643407-1	1.25306881292607	0	1.62743963552749	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13446496-1	3.17994915060029	2.77663605468609	1.29321866755303	2.14707390509597	0.0317873983814836	0.438672553597123	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39949824061849
Merged-chr11-120938161-1	2.74388439177929	0	1.45482762303364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120327906-1	1.20216160677155	0	1.55852420789417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122154882-1	3.33782792701837	1.3291093151178	1.24475670683481	1.06776634166325	0.285625924310511	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.70007682937819	2.40342423871206
Merged-chr12-17700100-1	1.55587953592411	0	1.59025758145706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4736437-1	1.03594476347501	0	1.69900819253891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34483782-1	1.98622454834691	0	1.43528206669211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79136007-1	3.81784006267089	0.779604261186562	1.05484201403206	0.739072060854476	0.459863241195852	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.49092140105159
Merged-chr3-130828119-1	2.26659137776163	0	1.45700927473671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74990676-2	2.83013318978717	0	1.40223661935276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32282921-1	1.78787688325894	0	1.49245652556134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89639261-2	2.61483621326892	0	1.53181697487991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127142637-2	3.52977123205709	0	1.39736863305493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87215510-1	3.72103111228256	0.328594246934805	1.18088789495609	0.278260322879355	0.780812531520415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.662147012823607
Merged-chr7-121289195-1	2.54568312596762	0	1.41385636787519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23182142-1	2.22970017125923	0	1.48771039213077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36538721-1	3.05171893830304	0	1.37588603211755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-118763239-1	1.56784061743368	0	1.52908803482524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-39001331-1	2.7227510434678	0	1.41091622213614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69092524-2	2.83899299846444	0	1.44841631166634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-88518310-2	2.6215699771168	0	1.40137649206703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23732621-2	5.74282464237481	0.232568229929751	0.735935679903611	0.316017060023794	0.751989559168072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27420117597098	2.38790687071332
Merged-chr1-135396404-1	1.86491977219869	0	1.42225936518181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67246961-1	1.54812467538285	0	1.58073178371305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90280694-2	3.20053321377091	0	1.38720363221995	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-40526308-2	3.77141012946008	0	1.41303660339378	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5768065-1	3.57473681040018	0	1.38781386635252	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120071601-1	3.92829721366893	-1.2877484986728	1.35583417514869	-0.949783183132687	0.342222432540394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr12-25103662-2	9.00126986928889	-0.387262283838681	0.679742749331352	-0.569718888829079	0.568868376631806	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47710967901089	3.88711757162609
Merged-chr13-17780107-2	2.49926445418618	0	1.46905479088914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47165817-1	2.5406750358009	3.07569955194462	1.29237989919799	2.37987263176509	0.017318622968777	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.47792296811651
Merged-chr6-4988784-1	1.87048720850363	0	1.48788027946008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-33178624-1	1.88793067087789	0	1.40495230436167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110908813-1	2.32945226017748	0	1.42725829583964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37617171-1	2.55089852946223	0	1.41155393116595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43460202-1	2.04811289225722	0	1.51151715118886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191877857-1	8.32268131916299	0.146289404478141	0.579405505154453	0.252481902875853	0.800668600512004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47482136950432	3.33742062958635
Merged-chr11-101589593-1	2.81120402866646	0	1.38915156839829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122985524-1	2.43293721686164	0	1.42359353127123	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44812825-1	2.0911436085835	0	1.43446134261422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-12413034-1	1.12219460421405	0	1.69590768136513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40264086-1	3.95226917047683	3.12344825904252	1.05794834630141	2.9523636668672	0.0031535128986819	0.0884986100461794	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	3.08121941813489
Merged-chrX-35895372-1	2.05532710217754	0	1.50524516099687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22633054-1	2.15679137221673	0.131624005110999	1.25767384119353	0.104656708917542	0.916648214522896	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58458601743443	1.34964801094734
Merged-chr5-77140321-1	2.50987810720537	0	1.39406739258692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95950799-1	2.59577822151499	0	1.39160280965265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24953817-2	4.49707672329147	2.87906370391368	0.956985494820132	3.00847162208535	0.00262565322194637	0.0765707529462355	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	3.58707611723535
Merged-chr2-166974184-2	2.51942172720581	0	1.42079061904102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70081214-1	1.18607747356425	0	1.67930233532125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45372394-1	2.94665641428793	-0.250618829486806	1.15323704510561	-0.217317706321041	0.827960759162001	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6950503635711	1.50481947192803
Merged-chr1-157294988-1	3.70795320624878	-0.237304585001071	1.15474182794818	-0.2055044506552	0.837178021186279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6342703608096	1.53935718689701
Merged-chr15-64197159-1	2.00574921142918	0	1.53451211451446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50353337-1	4.63390591211343	-0.41482060705984	0.681043986320716	-0.609095176511101	0.542461354571689	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26684525578774	2.5770492144698
Merged-chr5-65326818-2	2.45252854150493	0	1.43888864932636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43174569-1	3.78575206518531	-0.692482502385701	1.19318694225875	-0.580363795362031	0.561669314683624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.02674429890598
Merged-chr6-8655670-1	1.24061456396904	0	1.55676750068264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80963262-1	5.9709680030156	-0.571760666856717	0.671582279130821	-0.851363540438715	0.394567438358359	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4060907458601	2.60263190315104
Merged-chr4-128820673-1	1.61011060792114	0	1.50051583456814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164386263-1	1.26452847177762	0	1.72437138726633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58677714-1	2.86174530741036	0	1.4044786911783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60708327-1	1.896165735193	0	1.51032284202297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96759018-1	2.28584687458816	0	1.47488647780458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69675513-1	1.99853328365924	0	1.43680975737783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128241409-1	3.80307753905063	2.73456257255109	1.31750084152345	2.07556798930698	0.0379339246010395	0.491315274574197	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.36707655402198
Merged-chr13-60488428-1	1.92648128649929	0	1.4609626447702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-112370504-1	2.49981819113906	-1.60549684318245	1.8395087590918	-0.872785647389423	0.38277992409999	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46842849197915	1.55424902326769
Merged-chr6-31104744-1	2.97715980309541	0	1.45903634392921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45216699-1	3.19155073285483	0	1.41130448895054	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77433347-1	3.69032170023603	0	1.40237145293718	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-122707453-1	1.7808881069163	0	1.44870535694171	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110809856-1	1.80838988235049	0	1.49349814931841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58033496-1	1.77734801411971	0	1.48356490725599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-82922090-1	3.0258272515257	1.19318738780629	1.35177184362577	0.882684007240363	0.377407025344557	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.57857133234888
Merged-chr9-114621273-1	3.11844435729883	3.45555513224141	1.30035182683462	2.65740014427718	0.0078745914841838	0.170880206981536	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.52093504802274
Merged-chr15-53329432-1	1.1122765551115	0	1.5245845334784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-87315189-1	5.21115119839138	0.384858088066326	0.753459749670117	0.510787853279257	0.609499615516415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52123297932701	3.17158768761896
Merged-chr14-46924733-1	1.6533539271381	0	1.45428023155424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45792941-2	2.10531203842303	0	1.81442953225737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-87023955-1	1.53410922060062	2.74773925693281	1.68389303524972	1.63177779075814	0.102726305579823	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.29682576917379
Merged-chr4-129881784-1	7.42076597634285	1.56184921353271	0.70106817832632	2.22781358763331	0.0258929483909048	0.3848823575557	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87671264857868	3.5044348432186
Merged-chr1-80783460-1	1.54282478653982	0	1.76273969252988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-175080509-1	5.51190774558786	1.0223377024422	0.937888338419008	1.09004202372912	0.275694632970924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25210242546693	3.74817060785331
Merged-chr7-105396378-1	1.98342445298753	0	1.45829126393974	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119444112-1	1.75160785738353	0	1.53949465979637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40415669-1	1.52392918381734	0	1.50155608250088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17259283-1	2.85625101695442	-1.01191115566939	1.81420916982419	-0.557769838506243	0.577001561092361	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30712077184164	1.338064021838
Merged-chr10-16658716-1	1.42325453757859	0	1.61865045683588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140662581-1	2.77156746837907	-0.212648144334154	1.21251466259029	-0.17537779203418	0.860782789528622	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09296523225154	1.90433273254342
Merged-chr14-50167292-1	1.99020358782083	0.624490291756683	1.71207432932903	0.364756530168537	0.715293156517603	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.38647389072186
Merged-chr8-84743290-1	2.70913824881678	0	1.4537740827547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191202085-1	1.4372598955902	0	1.46384023459489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131980439-1	2.47207577761939	0	1.43744463682846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31170013-1	2.93872529979368	-1.70560906372059	1.39731721611211	-1.22063125255572	0.222225667827498	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr6-100435409-1	1.71268634628943	0	1.45869142340355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42017387-1	1.68090721814805	0	1.56855710243688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25746001-1	1.8240113960054	0	1.50774018968825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108737341-1	3.45163693490661	-0.000400408330686025	1.01512576447939	-0.000394442092494198	0.999685280752429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	1.32509503823899
Merged-chr11-118208398-1	2.35949316874944	0	1.52148134036827	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75450842-1	1.63911886450549	0	1.47943749897356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106687676-1	7.57753486000486	-0.79887988173861	0.619946746989639	-1.2886266209442	0.197527923981064	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3629993673302	2.21206482704682
Merged-chr4-101299809-1	1.35832311351028	0	1.77528910772752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-71986481-1	1.53833197645216	0	1.46332571403358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35778252-1	3.17886752796721	-1.35777813044303	1.52405089710496	-0.890900778328482	0.372982402717727	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr3-126463336-1	3.04756817970535	2.53435234721377	1.30952864755181	1.93531646058435	0.0529514736218884	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.88866493597531
Merged-chr15-99234530-1	2.17097487105122	0	1.45219270203706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77917394-2	3.30271609696328	0	1.38952439196116	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12795557-2	2.13414024148706	0	1.42855165935267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122112498-2	3.01148907153584	0	1.45510409363412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33018522-3	3.27127922090435	0	1.40730819171979	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-60429139-2	5.55044072204227	-0.170578560530217	0.783190760326522	-0.217799505779537	0.827585329651879	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	1.51226750748471
Merged-chr6-146745362-3	6.92341247804291	0.628247997287849	0.665891122377138	0.943469549564037	0.345440783454094	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	3.14327507880701
Merged-chr2-128787986-3	4.75368099591862	1.143922676574	1.2985283879037	0.880937750171717	0.378351513706232	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr7-18959633-4	4.33403391780516	0	1.38967429967614	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-11450036-2	2.74576215387087	0	1.39285608850473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90967675-2	3.40659781861431	0	1.39772347999794	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30869358-4	5.28583449369123	-0.790795545685114	1.1430096363455	-0.691853787176712	0.489029154531854	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	0.903978167044898
Merged-chr10-67052630-1	2.78033812181665	0	1.39898557910127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32566920-1	2.57596231235666	0	1.40257548830764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67430214-2	2.59422008655456	0	1.44152777814075	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77331169-1	1.19138811351458	0	1.50301540133963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119430747-1	5.49304992730094	0.0845826994442865	0.693594466663406	0.121948348076043	0.902939925109183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00419886809525	3.37940848379572
Merged-chr9-47787723-3	4.56118527175146	-1.15361629083685	0.950153107642983	-1.2141372601502	0.224695313739152	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56270667391421	1.56379394835609
Merged-chr13-105032299-1	1.46057953677779	0	1.50158240539164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91866094-2	3.04059266690441	0	1.38638806244278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38438609-1	2.13437406073468	0	1.41085470377079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-39067163-3	3.19000015197686	0	1.39342200891325	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-49413770-1	2.97896855847953	-3.48070960348625	1.24457488879999	-2.79670563403568	0.00516265463025144	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94051118279724	0
Merged-chr10-22154350-1	3.74651805113672	4.13239547590355	1.1545683729614	3.57916912733735	0.000344688351918331	0.0162505759947342	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.79781242999026
Merged-chr2-103664598-1	6.2737366797679	-1.73484350652131	0.799735741935548	-2.16927094232725	0.0300621199417376	0.423616590017132	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49985909124589	1.8538004573626
Merged-chr2-129401562-1	6.64568380637856	-1.44517206508739	0.746347760902461	-1.93632531748997	0.0528278698948089	0.612688325071884	C57BL6J_F1_Control-BALBCJ_F1_Control	3.05353529260579	1.25298535761957
Merged-chr19-45436260-2	2.82146817421461	0	1.38645579071227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22962518-2	2.84428206378667	0	1.42043094162877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73554004-2	2.08572175846998	0	1.41187386391737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156530046-2	5.23660173615838	0.206500572093024	0.70092321026373	0.294612261470591	0.76829009440832	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8372990371539	3.75161577645973
Merged-chr9-54676744-2	3.33444853813961	0	1.44035735562949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-8342125-1	1.73349084756115	0	1.44176657666957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99393775-1	2.00974471908293	0	1.45599446519322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130034603-1	1.88796629913623	-1.80874980207869	1.48679827954141	-1.21654015004415	0.223779226048257	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	0.413263464506793
Merged-chr4-151806866-1	1.67775588004009	0	1.48280763946577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60910336-2	1.97471241054251	0	1.47936244990422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-59207310-1	2.00931136977099	0	1.50799707746508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-21644065-1	1.58243705262305	0	1.51303461624675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21914438-1	4.97184570318506	-0.665982725968535	1.01843479758995	-0.653927701159202	0.513158386132356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42194161705889	1.39949824061849
Merged-chr11-3130402-1	1.84294496411108	0	1.52877484826906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-100968870-1	2.02389090124636	-3.58739304059553	1.42805245555113	-2.51208772244367	0.0120019250483923	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68041597300842	0
Merged-chr7-99044574-1	5.57624348305592	1.73828819500515	0.796736988375545	2.18175912549174	0.0291273147078837	0.416574543167388	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	3.40537827547831
Merged-chr5-66323267-1	1.23795020697793	0	1.64359657267938	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52042327-1	5.01165348819992	0	1.35718961024195	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-10392330-1	1.62818845118137	0	1.43061136076367	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-78232962-1	2.51335103609435	-0.11275527135912	1.83050433940963	-0.0615979262827014	0.95088302839509	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00129118555875	1.49873523349828
Merged-chr13-42393023-1	1.50273051155482	0	1.50508563652438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47039047-3	2.98174866190797	0	1.43429564871412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80954189-1	4.06380206271631	-1.68671042836401	1.24877351503028	-1.35069362703701	0.176793594606428	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.12314239243196	1.52268200068644
Merged-chr10-120712104-1	2.47468429135872	-0.645906680869623	1.75573506689981	-0.367883909734818	0.712959798364486	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr11-21718976-1	1.48910390624853	0	1.51065856549296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-22399453-1	4.09720163297851	0	1.3887668571259	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82369867-1	2.2792813555062	-1.25815820798989	1.21272569826828	-1.03746313761346	0.299520066617722	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21550655935007	1.17788344834821
Merged-chr15-51683660-1	0.960975217417951	0	1.87411098900099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-93816292-1	3.24496518964015	-0.605674383456187	1.12862598474858	-0.536647562293286	0.591511083789315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.953310774576147
Merged-chr2-60825925-1	1.05885962417321	0	1.65742084899617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-95746041-2	2.4927218648989	0	1.43474452071581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41379774-1	1.74818713235648	0	1.4386735226383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86221092-1	1.30340319437263	0	1.61383073831459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41481285-1	2.80191300589476	0	1.39465241722759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106469594-1	2.19906516102647	0	1.47054241525391	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54602001-1	4.27397694191601	1.78765215607474	1.14462867406201	1.56177474545591	0.118341063202494	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	3.45759660990092
Merged-chr7-90058886-1	3.16164075982649	1.15148432321454	1.49636247641605	0.769522319199333	0.441583300032031	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr5-145177886-1	2.61742062740831	0	1.43592629884597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108667880-1	0.808009077046749	0	2.03729434374719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-178507540-2	3.13888917039789	0	1.38498708730781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21310047-2	7.95376670445961	0.00162697661955028	0.610772937750118	0.00266379945637983	0.997874598054261	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.50044355139161	4.5542434389048
Merged-chr14-75835237-1	3.9862293725695	0	1.37498559074948	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61423420-1	2.54927133998422	0	1.3991224837039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-108360218-1	3.46448483042992	-0.979747257718292	0.924788080704119	-1.05942894178775	0.289404474763185	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30095837608674	1.62825810554086
Merged-chr4-136132796-1	5.33486963923092	1.05892005570411	0.694707969756978	1.52426645698989	0.127442162729093	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	3.4436174369594
Merged-chr1-144283977-1	1.84590047366964	0	1.46538463823081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70120753-1	2.78624595817923	0.887766363866325	1.16597829345126	0.761391844816053	0.446423056999951	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11190195371995	3.17579330497442
Merged-chr11-53528999-1	1.74096690208982	0	1.46937264006984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104317397-1	2.34645716548359	0	1.39892948817048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37821916-1	3.56383572218864	0.211186278250355	1.27896098680602	0.165123315276219	0.868846921966391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	1.29543960232692
Merged-chr12-41033467-1	1.55468737316292	0	1.55372242833059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103690686-1	2.18862660512726	1.28465469467755	1.44367652234833	0.889849405175537	0.373546754107657	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr10-78295837-1	1.55080265242943	0	1.49218285945864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16083747-1	1.5506211997035	0	1.4687039570353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-28757948-1	0.971263060304579	0	1.65697733457505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116124396-1	2.27603904750771	0	1.52896301744155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-127132713-1	2.10970741842408	-1.24022546949961	1.44160329620763	-0.86030981807702	0.389618282225696	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	0.600815099743027
Merged-chr8-105544058-2	3.04193325185176	0	1.40326594636377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70068377-1	3.19925024055833	1.34382243780871	1.19666725511961	1.12297084428402	0.261449877289386	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52242786274935	3.24606956697461
Merged-chr7-81839956-1	1.3350857341264	0	1.49243817052469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106420978-1	5.73861523503315	-0.844637890305807	0.766533844150749	-1.10189249535562	0.270508411593048	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59724686306	1.90761092747163
Merged-chr19-32269929-1	1.75860954294231	0	1.51009556205013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-35711565-1	4.34770855147828	0.972395785361522	1.05459763284059	0.922053828949286	0.356500498593214	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94621284947395	2.64737084860661
Merged-chr11-20711942-1	3.60901064754113	-1.34841662045283	1.37110258720552	-0.983454216362525	0.32538393796038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr13-107044356-1	2.99340486639585	0	1.4642626641452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-67085642-3	2.99419739371152	0	1.41226555975937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17222208-1	4.06655681798689	-1.9755069487797	0.802806500425694	-2.46075106234462	0.0138646528824524	0.253198485526151	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53266863442497	1.45451904642141
Merged-chr13-37338864-1	1.8704701702124	0	1.44041842822628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84315697-1	1.28354535027268	0	1.58382349393092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124507562-1	2.76515011669544	0	1.43447144305759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-101102861-1	6.18988095954217	0.569337813658549	0.751293265775466	0.757810351289244	0.448564524639548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25121929154759	2.87571429371836
Merged-chrX-151949106-1	1.33868300847157	0	1.59089834950125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73044705-1	1.54687584677499	0	1.46140324064037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68805844-1	2.14932080220631	0.161931698899112	2.01363563324915	0.0804175771551198	0.935905147630641	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	1.51436894928421
Merged-chr10-28380438-1	1.47522670184073	0	1.52229303168525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97288909-1	0.814478698712329	0	1.86844553044757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62169808-1	1.56005166261306	0	1.68944441276494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59847757-1	1.74548930501222	0	1.59103776745509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153945381-1	1.77549925187651	0	1.44601864340911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142903207-1	2.04597367407284	0	1.52459117758966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99188091-1	9.10071264137851	0.184107542956904	0.654414357722555	0.281331759892344	0.778455952718267	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32801625117215	4.53426096627123
Merged-chr13-75778112-1	3.78613599856132	1.43943567728147	1.27914161172667	1.12531377611774	0.260456094078299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	1.29741062002251
Merged-chr1-95355392-2	2.37052009721273	0	1.44864218031524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99602521-2	3.62950831918106	0	1.37903911700982	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87227028-2	2.58960065082136	0	1.38530003860723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160359095-1	3.60191401693213	-0.813027661369471	1.19258013472357	-0.681738390316155	0.495404387700867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76302217368042	1.06633037676026
Merged-chr4-133187074-1	5.00834543443113	-0.137385797911209	0.92080211286697	-0.149202305241732	0.881394001035369	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80720362046621	2.4005797435189
Merged-chrX-74413536-2	2.70131084088115	0	1.39102021959215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98770695-3	8.46502482903411	1.25829785919181	0.646677563467904	1.94578864379337	0.0516801333135902	0.603497393510945	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13923004754663	3.04114579264489
Merged-chr18-82878082-1	2.83253286310607	0	1.41606137041955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52031482-1	2.42725382174943	0	1.41392036154919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20892417-2	2.9575511173422	0	1.41999735557446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121252793-1	4.42226070702695	-0.0367830733400044	0.680657475266843	-0.0540405044777979	0.956902893466204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64322776951181	2.61161563923993
Merged-chr1-64909100-1	1.78032773258698	0	1.56302183509459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96080679-1	2.0094026359984	0	1.41455735490214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15029241-1	3.3072940663723	0	1.38217016898975	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-66404691-1	2.4783184389332	0	1.48531893875189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55683618-1	5.61625937787275	-0.13079435858197	0.727772097253676	-0.179718842032466	0.857373300488676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08925071846489	2.1881845164991
Merged-chr6-35148187-2	2.82145890863521	0	1.40842078679336	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16068259-2	2.28030422245428	0	1.48699839541935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59767095-2	2.94792411490995	0	1.41148123471154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35731351-1	8.00129209725215	-0.159253982544357	0.814464343425441	-0.19553217256212	0.844976353667554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.19523610847719	4.11210022305028
Merged-chr2-14208848-2	4.74006458339248	0	1.37068899634337	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57705363-2	4.05375258716396	0	1.38518219160899	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-114636447-2	3.47175707822601	-2.54088864178961	1.1876687952299	-2.13939159805724	0.0324039668317344	0.445147140006633	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0
Merged-chr9-55252256-2	3.29368934024411	0	1.38053510503599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103682563-1	1.17645553234928	0	1.60058019229961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116116060-1	2.51116298314064	-3.10659418801486	1.37298416232704	-2.26265842917631	0.0236567532926952	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	0
Merged-chr6-91110584-1	1.47045357676313	0	1.55709162537442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44564877-1	4.8391701787778	-0.821992719027504	1.23904137914393	-0.66341022411651	0.507067859574858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	0.67591700901439
Merged-chr3-100563706-1	0.915176365208759	0	2.0082862107388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156300204-1	3.38500797406086	3.42590142336386	1.04761314723533	3.27019704974576	0.00107472591182223	0.0379603806632518	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	3.42301926084739
Merged-chr5-149646152-1	2.18556324611487	1.85476561944744	1.59906921382592	1.15990327586243	0.246088188845891	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr7-132620660-1	1.78298429240439	0	1.50555210674398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73310375-1	1.43549442426187	0	1.48590747191549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76419434-1	2.58842023091825	0	1.43738229747164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16065092-1	2.36115891268183	0	1.44785350231638	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-87552401-1	2.07233731441165	0	1.57348194399697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111792624-1	2.40565079934466	0	1.39771980264618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-35043320-1	1.81994518494659	0	1.54654524643801	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192712438-1	4.13975022813745	-0.947265569221916	0.973081010184769	-0.973470409254054	0.330319560007322	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17282154714725	2.96008416464359
Merged-chr13-80955932-1	2.14019937330893	0	1.50718076257798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23268316-1	2.37592951375431	0	1.46601077889019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-13597152-1	2.55804992677393	0	1.43367079518466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32755266-1	2.40554451639006	-2.91051377029253	1.29522379746215	-2.24711264261463	0.0246328291501984	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0
Merged-chr10-45859331-1	1.48885073266571	0	1.5216983519167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3722517-1	3.38263642567443	0.2811955915832	1.15742295674348	0.242949727189075	0.808044342616954	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.30064958020929
Merged-chr2-14107835-1	1.95615347492032	0	1.6436502394173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80025268-1	1.57468466404324	0	1.52274734502078	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96571426-1	6.10448787487532	0.378135933927837	0.761075086770642	0.496844451356733	0.619298746053811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13202489384516	2.89410077220985
Merged-chr4-67477724-1	1.21949739784876	0	1.73500183896821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98217594-1	2.03973478013352	0	1.47942079943757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91668038-1	1.74441452168115	0	1.44526851888996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-61631108-1	1.46887971312627	0	1.51126327091855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93924076-1	3.81577324909146	-2.7207538400142	1.11216344798872	-2.44636149923334	0.0144306229447005	0.260263514482738	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93477196246946	0.878778741524029
Merged-chr7-34973260-1	2.50184872633815	-1.92472074068706	1.46406215475612	-1.31464414569726	0.188629526237465	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr19-40596532-1	1.33260673588636	0	1.82298236225028	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76227789-1	5.2339658471197	1.85317659475618	0.799160950766801	2.31890283550272	0.020400305357204	0.324821382223859	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	3.16829635805588
Merged-chr2-61815275-1	2.01258595123599	0	1.44105656986238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117776222-1	1.93133440474799	-0.592375411770613	2.12456256849514	-0.278822295259679	0.780381203569333	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	0.67591700901439
Merged-chr12-26436002-1	3.36625400857792	-1.7852455710795	1.01939009227697	-1.75128793638937	0.0798963246553568	0.793601019041953	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48586599042228	0.730937814817307
Merged-chr11-20466206-1	4.06648225139427	3.17034903952806	1.28109115574492	2.47472556914545	0.0133338589508489	0.245798812802178	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.9434461957353
Merged-chr15-8279588-1	2.15306317098416	0	1.43380518149381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186261499-1	1.12036670647668	0	1.79153794573166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-104473162-1	3.4941421226286	0	1.39097804681493	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99255021-1	1.21882584648144	0	1.62220039563313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41141126-1	5.73172163028878	0.131763832720508	0.737429713428044	0.178679852901487	0.858189089641769	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47111615257247	2.83294935282522
Merged-chr11-107676313-2	3.14798591726571	0	1.37587384081515	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93358558-1	2.2073079310793	0	1.39900678175057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92703797-1	3.63032122409803	-1.90797544801108	1.35453580001854	-1.4085825180737	0.158958651134678	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr16-92671624-1	1.96123363212526	0	1.41784549719449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-88368852-1	2.19829238882954	0	1.411736139518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59261276-1	2.42870994988809	0	1.49192595903045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35270578-1	3.19946082878995	3.68213241483647	1.17164911532625	3.14269209669584	0.00167401829444277	0.0539406997436956	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.6664027184596
Merged-chr13-95502382-1	3.16714526876866	0.0997356653001811	1.11921668302352	0.0891120252342461	0.928992880662397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8460126076219	2.83211113171061
Merged-chr7-30247224-1	2.45159149096997	-3.94332045159563	1.34982885210414	-2.92134846980689	0.00348519767306618	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59516630972471	0.303163067301871
Merged-chr4-124114154-1	3.06684126023429	-0.160697981756166	1.19579818855472	-0.134385537036471	0.893097717666859	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2972429702454	1.25298535761957
Merged-chr9-21101095-1	2.88778092712131	0	1.38605964369683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-100453714-1	4.06171821766963	-2.11857628544496	1.03549346170645	-2.04595814825681	0.0407604885066957	0.513902277280077	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52965008261298	0.662147012823607
Merged-chr4-59815275-1	4.56716186498665	0	1.36653671205781	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-8545247-1	1.81378166951719	0	1.5168707941114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44061767-1	1.7709953792237	-1.36519180710433	1.67611725040015	-0.81449660325279	0.415360517340832	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	0.41385117919798
Merged-chr2-53029014-1	1.48210558175705	0	1.7071753761981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32956534-1	1.34935787214464	0	1.77924457250522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110477564-1	1.15257374466933	0	1.64113430419363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3697210-1	1.64887048291352	0	1.56551597195238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-151116996-1	1.36046112563481	0	1.65351077225108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88097948-1	2.72984022788105	0	1.43879227161553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-70425509-1	1.2671073352499	0	1.80143278874559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130558184-2	5.0255640233181	0.994825932249698	0.754198603834677	1.31905034985688	0.187152280319118	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72081599314607	3.01906988666638
Merged-chr10-81432331-1	2.3556976063704	0	1.41830243049132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-107075807-2	1.59746701297537	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34518447-2	2.58630775175352	0	1.43135499696166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-66357228-1	1.71445647752276	0	1.48880813850929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52099089-1	1.9254049471425	0	1.55678480403093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-14959130-1	0.955961504172642	0	1.69812922872559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45918819-1	3.35425944350873	1.02477482393911	1.24593528823054	0.822494421355128	0.410795560392893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.30281892590853
Merged-chr9-70388990-1	1.10092087818239	0	1.77775681483172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10486558-1	2.35970622266091	0	1.43882620166783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36723293-1	3.87558534281519	2.38328899605736	1.293764733369	1.84213476730905	0.0654554393615849	0.703875811722333	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.14143228603163
Merged-chr1-154788265-1	3.07103963170329	0	1.41431989815913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91750968-1	1.65848075896756	0	1.61315118652089	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52077794-1	2.51246830986706	0	1.43395756704891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43400089-1	2.669415304075	-0.293550386331153	1.36567288931494	-0.214949266861704	0.829806873116779	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03283973350588	1.80179175376942
Merged-chr1-170820304-1	1.48340549272983	0	1.51815559627921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125128539-2	6.1784573364847	-2.13241466778893	0.892537784139304	-2.38915898652433	0.0168869928417563	0.288032646339827	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61055593703767	1.39284430389808
Merged-chr17-74804711-1	2.32193487021401	4.27843332840556	1.55741288812898	2.74714133998564	0.00601172210052053	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.13100010773246
Merged-chr10-121446753-1	3.05319994963381	1.61099629329018	1.39070019081643	1.15840660979878	0.246698143049223	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.86964006984594
Merged-chr19-41053658-1	7.42703140126792	1.0622393067954	0.690867277192847	1.53754468023369	0.124159982415072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39855328800337	3.8091816040265
Merged-chr12-112802742-3	3.02965173964617	0	1.42454225447867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129300628-3	3.58038254251393	0	1.45811175615513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43476927-2	7.21466952747355	0.245190323949964	0.66784335276056	0.367137477578325	0.713516473206575	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14826470229156	3.86314568655086
Merged-chr1-156621961-1	4.3947727155791	2.97689851137209	1.21830855032143	2.44346845516818	0.014546841242116	0.261838325523239	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.39020008251549
Merged-chr4-141678449-2	6.78802774109364	-0.779383133441886	0.634296160114545	-1.22873695672561	0.219170445179007	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25633562329303	2.38080482428767
Merged-chr19-10034929-1	3.14021007266457	0	1.3826451033242	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126230552-1	2.36925976510001	0	1.42675544178757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103899360-2	2.04794561866939	0	1.45818010984567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39638251-1	1.38901971682401	0	1.64315738444946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94680989-1	4.67811668719693	0.0843461692926651	0.893052970688375	0.0944469948156045	0.92475408615203	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.01372795773128	1.9134233865196
Merged-chr8-94702997-4	4.27553464790282	0	1.36226920817288	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-30010158-2	2.14685521273385	0	1.48231106986082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24173834-2	2.87189469995773	0	1.43816575553656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-65189359-2	3.28267976635217	2.15881530198814	1.29002418438633	1.67346886059745	0.0942350317253778	0.876908175774803	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.765562747387088
Merged-chr11-16987529-2	2.67198394407004	0	1.38317225532718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-61985273-2	4.07471381090555	0	1.41963924085696	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65965226-2	4.17572340642376	0	1.36815443641824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99090065-1	1.9505631571368	0	1.62510858476475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155538422-1	1.33525802824112	-1.44174596217943	1.91266429835177	-0.753789341612038	0.450975724977699	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr1-170992720-1	3.10765710003462	0	1.38690814493665	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17636696-1	4.21922955795148	0.687681835554652	0.730562104071112	0.941305101540982	0.346548529170401	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	2.8269405338202
Merged-chr13-99152446-2	2.31464807174406	0	1.44124827722195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-45103528-1	1.89401984377682	0	1.52285145769254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70901227-1	3.48531564738576	1.28423139306875	0.817343788484703	1.57122548817508	0.116130281679857	0.996446063802034	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	3.34998140790653
Merged-chr9-89928634-2	4.06124939233578	-0.49219176672583	1.2110678728699	-0.406411381023155	0.684440358734516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.879366456215217
Merged-chr12-100680226-1	2.55778556372922	0	1.3941128114382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21784091-1	2.11510773147585	2.43851576103156	1.49094079774564	1.63555505672571	0.101932743013538	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.837303648891292
Merged-chr10-60658372-1	2.03280077478299	0	1.42164700002563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136519215-1	2.03604663056923	0	1.56826815081799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72533982-1	2.40611447538322	0	1.53098690237866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85288566-1	1.4015314706808	0	1.58539428835096	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-41182524-1	2.09782806835037	0	1.45459910215954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142219297-1	2.57121407252397	0.116707083365431	1.30365709785014	0.0895228381434748	0.928666404237449	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3401588617582	2.01114567419344
Merged-chr14-45662911-1	2.53278937443122	2.72494687789583	1.39520827632004	1.95307533946334	0.0508106685997239	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.20696897891637
Merged-chr4-124228756-2	4.52877636597328	2.82077129127085	1.26015603295791	2.23843017649948	0.0251930160008563	0.376434072784648	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.86099001119595
Merged-chr5-52686076-1	2.71073387442383	1.6855452334922	1.34913386134319	1.24935359032059	0.211535775015284	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.8062683988595
Merged-chr11-106663494-1	2.11463943027122	0	1.44240465255809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-20724597-1	2.27178403447019	0	1.45268611471944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-138740831-2	2.56759107257442	0	1.53684772794412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36727881-1	1.68333219863462	0	1.46004537049159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84633323-2	7.11764528589808	-0.332017946991734	0.76743309116733	-0.432634389646538	0.665280401705104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59595938994595	3.33207201869011
Merged-chr16-73933975-1	1.46863233361215	0	1.48237128366595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147866322-2	2.2341999498299	0	1.47177852041344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38403670-1	2.08090612031012	0	1.44940791735393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19504128-1	2.16806139728708	0	1.46627743776539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41842181-2	2.6633280257659	0	1.42369311450419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129611726-1	1.77486698155175	0	1.50547697189134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-32613721-1	1.21233144842597	0	1.79853313493889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65510658-2	2.29755384369453	2.69749697664473	1.41249156032938	1.90974378354212	0.0561662106267711	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.897114879832661
Merged-chr9-47770353-1	1.91437912044007	2.07458119662477	1.68133679564715	1.23388794083119	0.217244663736409	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.765562747387088
Merged-chr17-71214775-1	2.44841136672876	0	1.40056669450102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-83750049-2	6.2982917587894	-0.376589311184805	0.689789487822133	-0.545948173802717	0.585101562669105	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84583565619994	2.15890824657754
Merged-chr10-117806496-1	2.63658131463167	0	1.45717136090423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-31005202-1	2.12233497698877	0	1.51640676040561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72355152-1	1.0715356553902	0	1.87863611617456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146525695-1	0.97040423096307	-1.18533468274614	1.65029657756688	-0.718255554097878	0.472599729545389	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr11-107786748-1	7.46082617833928	0.121053734522019	0.653218464743741	0.185318910985636	0.852978906105896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26028312783496	2.40373656850996
Merged-chr3-38103145-1	1.74193929510941	0	1.44468943457246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13997965-1	1.50588872214465	0	1.49273675126541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34644585-1	2.58927816713559	0	1.45865504343858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-10501926-1	1.86996623026128	0	1.46606230602789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25039078-1	4.27884793527205	2.70128180196745	0.983731626057273	2.74595400860903	0.00603352211197675	0.141098191050649	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	3.10062581119659
Merged-chr8-33990143-1	6.40001052846243	-0.790489610411707	0.784075706859335	-1.00818020950816	0.313367956911099	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81140286917101	2.61211417470891
Merged-chr5-115494183-1	1.76087909266194	-1.4011586434832	1.34660973110379	-1.04050833075051	0.298103795666212	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0.600815099743027
Merged-chr12-119088755-1	1.49267614800593	0	1.64706899911007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124990773-1	2.15084783166426	0	1.4286972604066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125302313-1	3.40366404018306	0.2896648288582	0.953452627084436	0.303806209799816	0.761275535490218	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	1.39949824061849
Merged-chr2-102804305-1	3.81194041140842	3.03533017999915	1.1957869007796	2.53835376355122	0.0111375338281925	0.215976228450101	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.63082303200822
Merged-chr15-25428727-1	1.87997270105653	0	1.44088519645973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-48320763-1	1.4851301429233	0	1.47012700635552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123933857-1	2.44636168369672	0	1.4193017145932	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-111976873-1	1.76871876425319	2.87368734983589	2.3064166223131	1.24595327749324	0.212781548743564	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	3.3591863049777
Merged-chr16-43354697-1	1.91992425615274	0	1.48013754225353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107619656-1	3.29505953904254	1.73415676227817	1.18159698983544	1.46763810097357	0.142202552743911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	2.69168143406977
Merged-chr8-123004049-1	2.14287155291642	-1.1899970837293	1.47221547044658	-0.808303612900035	0.418915823207186	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.376242425970964
Merged-chr6-125355800-1	2.17014996187282	0.61691573030339	1.33724672249598	0.46133276674024	0.644559879880407	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.723581231604105
Merged-chr12-83771026-1	2.14197986786068	0	1.41457761357044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29309547-1	5.48665772314228	0.235335050646949	0.844594854543766	0.278636614207261	0.780523710982621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93135243438938	2.88651432999689
Merged-chr11-5732509-2	3.62689357727541	-0.9333383157896	0.971253779819888	-0.960962351119684	0.33657109824333	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09927897987273	1.25298535761957
Merged-chr13-40843551-1	2.21751917851463	0	1.4153351499434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64342259-1	2.51004126392875	0	1.43929580241743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37559530-1	2.84682992469245	0	1.43266186361768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146656062-1	1.72301880261137	0	1.58705061053695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-71931857-1	1.47066542412487	0	1.50062174087882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88926995-1	1.09372805249356	0	1.61314158831186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4348432-1	2.1477870803103	0	1.46332431329039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116089046-1	2.12868432620941	0	1.4882759817301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100723680-1	2.76827633176201	1.80354802102244	1.1501075926806	1.56815591210806	0.116844750613923	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.46556175443215
Merged-chr3-135683477-1	3.16760772863942	0	1.3753723622653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-56525559-1	1.15375278056287	0	2.41959584931479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-55057050-1	3.16080631278352	2.706078365768	1.26580886044982	2.13782542555941	0.0325309146156401	0.446214480845718	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30139522650344
Merged-chr4-95385871-1	1.53256937805387	0	1.50090012563678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58189749-1	2.34463128426392	0	1.47686392499063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-41933603-1	2.39176950844039	0	1.42927248687913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43966572-2	2.18344869194802	0	1.55633308581113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34123087-1	1.17531876810491	0	1.56115261204906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119920028-1	2.36822674252229	0	1.42951098155972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119923188-1	1.94404891053695	0	1.50857943452673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37477880-1	3.00148633736203	1.3338250458695	0.965533543561357	1.3814383298893	0.167144227359555	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	2.29256834160685
Merged-chr7-74696443-1	4.05297380197757	1.30994633828543	1.126152055995	1.16320556474769	0.244746109314667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.00425570563599
Merged-chr6-140619335-1	1.79109142687721	0	1.45590383628196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30411751-1	3.73098089323852	-0.794841421357583	1.24328765152725	-0.639306133525255	0.522623799139775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.95685815637649	0.765562747387088
Merged-chr2-30328843-1	1.18073071123566	0	1.88423084386777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70588767-2	2.55427535606779	0	1.50038030344437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-69121443-1	4.158240676997	-1.5041922667213	1.19447481770943	-1.25929173593278	0.207924977088595	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.789505890477757
Merged-chr4-135438111-1	1.92984683132013	0	1.44125040146816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137652671-1	2.62815900054523	0	1.42579529583169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72587706-3	9.63589362486979	0.309923613727589	0.669763863921087	0.46273564523646	0.643553864888921	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.86643688500114	4.38129291707774
Merged-chr1-88256413-1	1.73205707659494	0	1.49336127527325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4906918-1	2.13585895575491	0	1.44009466142196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107893562-1	1.20068817830469	0	1.466821688871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26300953-1	2.18064857983344	0	1.41357502732139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13163968-2	3.38109434837694	0	1.3769717721553	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92099601-2	3.26386299312577	0	1.38079031434533	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80810216-1	2.5692585825014	0	1.41353394184595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53692113-2	2.38641314889041	0	1.4548629708348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70820266-2	6.8613371385644	0.389119011378743	0.761326116835072	0.511106873617261	0.609276223109713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11774774311448	2.34389556366799
Merged-chr17-56357724-2	2.45591014473335	0	1.44586199132476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142715648-1	3.37647332233235	0	1.39672402075007	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21153703-1	2.67660803226859	0	1.41108277492198	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57400886-1	2.40211280803605	0	1.41368435982839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84288682-2	2.48025452298421	0	1.44165210615877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78139420-1	2.00438727382626	0	1.40134788248862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75318617-1	2.48033655513218	0.371473447275481	1.09070370032481	0.340581449540197	0.73341869651288	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.91035174140237
Merged-chr11-69689221-2	2.47493913398668	0	1.426254958032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122404915-1	1.76383257702833	0	1.49140350000606	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53613867-2	1.89942214589397	0	1.50866817166532	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155571605-2	3.38871007890078	0	1.38448678974441	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117873350-2	2.86799936234993	0	1.41207653676493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184778713-2	1.62457980554811	0	1.49891843094674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79202398-2	3.66250457124671	0	1.40227454361206	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116664308-2	2.60444574461171	-1.73004998450152	1.37565732523074	-1.25761696083095	0.208530316438534	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr6-54034618-2	2.60054370530543	0	1.3976513755863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58189130-1	2.27247862339023	0	1.39803004844891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4746302-1	1.83827579310972	-2.36398266315908	1.67877051659414	-1.40816308113099	0.159082785538757	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4944959016211	0.303163067301871
Merged-chr7-35235436-2	9.31486561015305	-1.35169112389473	0.606329956958339	-2.22929958908101	0.0257939779748197	0.383516096480642	C57BL6J_F1_Control-BALBCJ_F1_Control	4.15356762517577	3.18044528094856
Merged-chr8-90793889-1	3.6156155773007	2.91575249421815	1.1034295981513	2.64244542570114	0.00823097289371737	0.176162993768325	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.47549643264008
Merged-chr5-135551093-4	7.89715567382539	0.593761826461738	0.555811264951143	1.06827958320336	0.285394415322578	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07651089655187	3.58603445052624
Merged-chr4-46657314-2	7.4034065343523	0.0299213838648719	0.537803164156309	0.0556363105669186	0.955631537641275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.42797074811148	3.46571415044511
Merged-chr2-128393049-3	3.64546754237818	0	1.37515969195987	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-39175081-2	2.41143635242095	0	1.41746142714593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50060958-1	2.50058383088116	-0.0343595606726554	1.6065394713156	-0.0213873118501833	0.982936694928855	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr2-152821209-1	0.982695241118351	0	1.69786690123051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34215823-1	3.12761793806606	0	1.37470723491752	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6336323-1	1.5279417204762	0	1.53425728654092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172831296-1	1.90039414228317	0	1.52539170317525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-96784991-1	1.96395830208301	0	1.43524186520767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105711622-1	4.42481415358646	-0.449100804943433	1.02475871838275	-0.438250289445884	0.661204857066296	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13923004754663	1.85449916425446
Merged-chr5-36562064-1	5.93974956019273	-0.10498309725827	0.840256645422035	-0.124941704216502	0.900569701844097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44600009520379	2.14430615128682
Merged-chr8-110950491-1	1.23335589860678	0	1.65753619180422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9885617-1	7.66924948125894	0.250469353805215	0.869093632666517	0.288196052060278	0.773196670648731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77613351389415	2.81484412449046
Merged-chr5-30851005-1	2.27206895519785	0	1.42471624546451	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89417013-1	1.40055254631775	0	1.65024983839935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103381019-1	3.41078114597564	-0.247488605534451	1.0252239488367	-0.241399555497383	0.809245457228061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01790015288392	1.98957305951408
Merged-chr15-8682719-1	1.65120927802449	0	1.41857068284234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-25540647-1	1.61081458031156	0	1.59974028949599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55028615-1	2.27401421680805	0	1.4342547796471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51761416-1	3.20271179938194	0.136129383517252	1.07357822155373	0.126799687981971	0.899098942699414	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98439646562239	1.68580115571326
Merged-chr19-38845562-1	2.05582347285395	-0.907287568519192	1.27024767174921	-0.714260367247754	0.475066194515912	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74704977609752	1.60310561942228
Merged-chr1-184610470-1	2.34291270865459	0	1.43165331763158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-128637554-1	3.18354004244839	2.31700043592308	1.21927129300579	1.90031574532615	0.0573916962855273	0.648058832236181	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	3.93421957243295
Merged-chr17-5688367-1	1.80965711114176	0	1.45799838180599	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99230734-1	1.95426033858032	0	1.51762957914906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-137953170-1	1.3592738146075	0	1.53646747806315	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54690798-1	1.93866880581873	-1.14457323706941	1.43141038039087	-0.799612223544772	0.423935503140513	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.601513806634888
Merged-chr17-23731419-1	6.56523065497337	0.43408467109747	0.919189973162974	0.472246960662294	0.636750523788096	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90879166436939	4.26447131966594
Merged-chr2-59039159-1	1.77787101974404	0	1.48670622915683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121469829-1	2.4647991152338	0.163432319231985	1.02667972190419	0.159185299704631	0.873522885316937	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	1.70869404742316
Merged-chr4-45447421-1	2.61627266250084	-1.26924727323862	1.44417549144977	-0.878873295353086	0.379469979505294	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr1-36129966-1	2.56320150110581	0	1.39992960906692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40786275-1	0.837617775347244	0	1.69751908361617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-121795831-1	5.30261920027542	1.89934143174753	1.16999927381892	1.62336975265635	0.104510386654659	0.937471965043007	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961371261847668	3.85770869060703
Merged-chr10-31544381-1	1.33713623713587	0	1.56994113587852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21917750-1	2.64128170460251	0	1.46643967960034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21269147-1	1.50553119426855	0	1.64517318609335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-78924501-1	2.72269286219455	0	1.43256030227144	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-104111403-1	3.80946028676515	0.70997795111927	1.24860314801874	0.56861778079436	0.569615555475659	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41373779137467	3.0114815307997
Merged-chr12-17792549-1	1.60410456153538	3.80917305309974	1.81725948622462	2.09610849852452	0.0360725672956559	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.98957305951408
Merged-chr3-148347860-1	2.44815580980052	-1.53242405926272	1.27818647013154	-1.198904929032	0.230564914940117	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57403368136583	0.465515277017237
Merged-chr4-99062179-2	5.06653356356634	1.04697196167236	0.895552180835894	1.16907979688591	0.242371482865888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	2.1304360554358
Merged-chr4-139268530-1	3.08401877334813	-1.06576041723462	0.914016926275265	-1.16601825042532	0.243607066696174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61944793579884	2.30741877293786
Merged-chr9-62932774-2	2.27808084377516	0	1.45381631792145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-65452098-1	3.70956908227598	-0.617144768644637	0.984817239139333	-0.626659185194586	0.530882663381142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32785350547649	1.94207584056134
Merged-chr16-25597613-1	2.55160644302003	0	1.43171504911056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27961939-1	1.52053304250992	0	1.46117096473594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127479271-1	2.20622370744295	0	1.41210202243822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99240262-1	1.62444919317336	0	1.50491794898823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35828031-1	1.83268386627024	0	1.46112208442864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-117424226-1	4.59701974456967	-0.322819024005616	0.816936843503648	-0.395157871226767	0.69272638175469	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41272900099005	1.46460328489499
Merged-chr8-83250880-1	1.92551375330992	1.73308136886377	1.41371828284469	1.22590291849127	0.220235210410181	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	2.14347975176101
Merged-chr10-127746430-1	4.93596197780429	0.706199987294659	0.867278345176983	0.814271440330436	0.415489467016699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.13831403070989
Merged-chr10-63416431-1	2.3274456925297	0	1.43980809308162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102377893-1	1.97826775008255	0	1.52821232374712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-49022443-2	3.96049944057975	2.02078725730454	1.26547988460221	1.59685450704715	0.110298142544697	0.966884427547959	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	1.85314874973115
Merged-chr3-20003017-1	2.35239873169056	0	1.39975690341443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78203925-1	2.31337761437642	-1.11678966835233	1.39805345028952	-0.798817576052655	0.424396197588216	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	0.303163067301871
Merged-chr3-149348891-1	0.960801239224062	0	1.8088253273817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83235725-1	2.28398095579099	2.53483041685161	1.36527363903525	1.85664642191642	0.0633614747961869	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.00101204725338
Merged-chrX-57303675-1	2.16847284974341	0	1.40857776185024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-171630725-1	2.71831067310139	0.494449566153469	1.15567451230774	0.427845003837727	0.668763969335371	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.86852815722235
Merged-chr12-31610517-1	2.23342398561833	0	1.50085850498556	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40392887-1	2.55919130870245	0	1.42607353886522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48988316-1	1.75986108638288	0	1.50958269892602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-21250613-1	5.37999086578746	-0.311216963407636	0.815638428557442	-0.381562408674223	0.702785971765998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	1.33638302378291
Merged-chr2-181737789-1	2.2735472451948	0	1.44565139408982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36930590-1	2.09929335076693	0	1.44308128306487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70863615-1	1.70351579309933	0	1.459409533089	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93974599-1	1.8708769937958	1.20362235015347	1.43162000309373	0.840741500923739	0.400492765620002	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr17-87617005-1	3.4126816796523	0.171229302834041	1.25598269858125	0.1363309407267	0.891559665061124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.662147012823607
Merged-chr2-144715484-1	1.0029812023045	0	1.75093752487995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139366642-1	3.95184808783565	0	1.39889853373164	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37131542-1	1.9043514219527	0	1.6254952659151	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16301083-1	1.7969677287853	0	1.45722822165957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13484690-1	2.57993506752852	-1.89322042060211	1.31436758241986	-1.4404040741149	0.149753111704514	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr8-108710997-1	1.98678785697262	0	1.44225389960765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-109610073-1	2.91360949124743	-2.96997128991393	1.18399103521509	-2.50844069049424	0.0121265323672572	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75733238011489	0
Merged-chr2-156960123-1	2.21963484260603	0	1.44506596127396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84096580-1	2.20069175786703	0	1.42859312007654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-99446241-1	3.41647655288865	1.23538431910385	1.29490864667021	0.954032025564565	0.340067431707598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90181590910944	3.26381443132118
Merged-chr3-90617719-1	3.44993636614298	-0.691676278421964	1.30078539180829	-0.531737427847671	0.594907865548642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05629245276768	0.887876939341704
Merged-chr4-132065844-1	2.48429903051449	0	1.42779550830312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-86585294-2	2.90974585702362	0	1.4533004689169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3496228-2	2.00764638162887	0	1.57572501364783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24862859-1	2.73930695344491	0.531155578823398	1.92344859205107	0.276147530544084	0.782434755316222	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87647711809217	2.23302883816167
Merged-chr4-105378012-1	2.00155941802232	0	1.49138085723595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25463022-1	1.61978795407525	0	1.68245659229598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119336663-3	2.4918721298926	0	1.41884145045308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34060188-2	3.45500614014207	0	1.37552090964457	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47331667-3	13.2040176258476	-0.263529788483326	0.517792335652624	-0.508948801165961	0.610788111933709	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.61280561609301	4.20280672907492
Merged-chr14-63077320-3	4.06728667741771	0	1.38368406858095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104432018-3	3.22637548126679	0	1.50572250330401	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124616650-3	3.40572492099255	0	1.41150417147892	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129382306-2	6.06362995488196	-0.802326718063391	0.802953602442239	-0.999219276958293	0.317688479591046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12456745674006	3.28821487552627
Merged-chr10-44533484-1	1.85497540077989	0	1.46736864628696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-51724507-1	3.4973390060488	-1.48446280509845	1.86697479203	-0.795116683650755	0.426545630652597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43360160126904	2.23795018088832
Merged-chr4-10998904-2	5.39474309782316	3.04705799854144	1.1432282760788	2.66531021170388	0.00769173339214396	0.167542425835445	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.05316670993625
Merged-chr2-153079234-2	9.33203948465018	-0.212815334777753	0.689344642346539	-0.30872124290881	0.757533583154745	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11252919526046	4.41360390124385
Merged-chr11-109621345-1	2.48119046627501	0	1.43226066576212	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27726518-1	2.21641762131404	0	1.41081279402387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12865850-2	5.68154190333851	-0.734940535979873	0.865255910578318	-0.849390945493403	0.395663789785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.31841236551031	2.14176814263789
Merged-chr3-100568693-2	3.67510668151997	0	1.38940708271766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85593215-1	1.92734012980804	0	1.7414946297743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-77251939-2	2.81892576036375	0	1.46109436177901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39002646-1	1.92119038486548	0	1.48808537254406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5793640-1	2.77428022974855	-0.198568127631256	1.40504775752378	-0.141324824418215	0.88761333937596	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08974267817771	0.97908007631626
Merged-chr11-4866055-2	6.30318707304773	-3.06607823316426	1.02929427128595	-2.97881598945814	0.00289364494928467	0.082613259347776	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51874890260649	0.601513806634888
Merged-chr2-38346587-2	4.79265720457815	0	1.40567128916095	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99095398-4	8.75779793005774	0.284424718083875	0.617245832905379	0.46079649779908	0.644944614628744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55089549138126	2.90235352451704
Merged-chrX-169136026-1	2.84433217849893	0	1.38264351574494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116908785-2	2.68539716533059	0	1.47210802331476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99450108-1	1.24710394081353	0	1.51857191336868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136793723-1	2.18413282489783	0	1.42820203478726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101751611-1	1.80112297760183	0	1.5007119733265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142074965-1	1.62798004194818	0	1.55725274402141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79589312-1	4.24126975033291	2.32257526125353	1.23655403159143	1.87826427468309	0.0603450212113587	0.669174828239136	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.730937814817307
Merged-chr9-81626087-1	1.45323896158219	0	1.57376709440871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121669401-1	5.58707812759502	1.52977660359593	0.881017398728257	1.73637502029376	0.0824975461399416	0.809366507793314	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	2.58632175313065
Merged-chr3-9705212-1	2.24544588033455	0	1.43463843440019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-79562225-2	1.88146786558782	0	1.53644123141423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-28197712-1	1.76202417976791	0	1.45663580633228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33893893-1	2.01710487591745	0	1.47658274286609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126464183-1	2.14600735279323	0	1.4894849389447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21860319-1	2.2341580682931	0	1.50230806168433	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12002485-1	1.9604578488356	0	1.41139560422495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101971953-1	1.98010756180145	0	1.4206878361098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75861843-1	2.30038045744294	0	1.4235168578103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-125479101-1	3.45539534927251	2.09764895642465	0.950035818703848	2.20796828406587	0.0272464841335435	0.398035358418752	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	3.86408300319545
Merged-chr7-123360383-1	2.80065428474424	0	1.44128072650239	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-111445001-1	2.00056352093378	0	1.50632486404811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76318694-2	8.44805956097766	-0.209060397215426	0.789743946267571	-0.264719214630858	0.791225774268106	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84209457079675	3.21284240940819
Merged-chr5-118462461-1	1.11141615930438	0	1.62694058471995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151394182-1	1.32267955794141	0	1.60075698776488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83297638-1	2.22693402993831	0	1.42903493885246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61059192-1	4.66092305491367	0.522935011463882	0.674912698453212	0.774818747168874	0.438446769902517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51338020061524	2.89590425374493
Merged-chr8-33970184-1	5.29496122136993	-0.0405912828939527	0.716467832104829	-0.056654717874359	0.954820245942355	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4373360589375	3.40181164327157
Merged-chr6-148579080-1	1.54335424674297	0	1.46757098472455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-49331923-1	1.54077167800604	-0.0320722593411646	1.53023569759703	-0.0209590322533505	0.983278336016282	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr9-103225649-1	2.43031985199068	0	1.50971860106781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157717679-1	1.6045204071282	0	1.57680347187954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-28876737-1	2.76142720366205	-0.471455707256327	1.76624238791783	-0.26692582540277	0.789526272035652	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13397455622281	1.86006586565964
Merged-chr9-40391623-1	2.67867323122593	0	1.45615353604911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151490061-1	1.52631733074829	0	1.50790546193574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-125224777-1	1.73955007448789	0	1.50027392115353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120471357-2	2.10903805631947	0	1.46192751045127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135191757-1	2.79141099701247	-2.78960614014311	1.29220341604686	-2.15879799225198	0.0308658423290024	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0
Merged-chr15-36888550-1	1.54672133754946	0	1.47588784308696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116217273-1	2.35124854568813	0	1.41621568114236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-16077209-1	1.40152193716446	0	1.54800557614412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87552060-1	2.36737761737919	0	1.4190757791967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-34667173-1	3.07461503506836	0	1.39971143213374	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-92037261-1	1.69171726398126	0.606925272281073	1.53788698404793	0.394648812673843	0.693102084161458	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr10-77353582-1	2.28895602094281	0	1.47752949028822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98923297-1	2.41211596028673	0	1.41411019193358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44979647-1	2.14075740171314	0	1.4797578699125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65119875-1	1.16272623415208	0.571581887732689	1.80914464001014	0.315940403598401	0.752047743772857	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr8-83243049-1	3.50076349750488	1.48941966690495	1.33748581063942	1.11359661168509	0.26545228068273	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	2.73244951282503
Merged-chr15-67067126-1	3.71006161699653	-2.11680796696119	1.08851822624315	-1.94466929071737	0.0518147938561018	0.604625371000121	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19786007171311	0.837303648891292
Merged-chr13-118778705-2	4.77747102623718	-1.19936399715653	1.00688266029189	-1.19116560891896	0.233588577642229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90796878661446	1.33638302378291
Merged-chr1-161730006-1	1.63528992773483	0.837719252820556	1.46149262289223	0.573194308133247	0.566513137837306	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	1.51226750748471
Merged-chr2-59132448-1	2.12217343511145	0	1.52061735258086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140763429-1	5.26633760532296	1.04166976271481	0.953173561493859	1.09284374304534	0.274462412015088	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30831180799264	2.38074476949954
Merged-chr18-34512044-1	2.16330006772594	-1.74573575596765	1.53172522510102	-1.13971861751674	0.254403548254569	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0.465515277017237
Merged-chr6-146678683-1	4.10423196221483	0.191655744152358	1.03168986252161	0.185768757758191	0.852626105725863	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.05916644618774	2.42698818581862
Merged-chr10-19580966-1	2.27677546915716	0	1.46053753626359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-61992519-1	3.11326805630167	0	1.40358362851456	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11751276-1	3.36352964942866	0.490901908993524	1.39999841865333	0.350644616774443	0.725854979807385	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.723581231604105
Merged-chr16-70932993-1	1.18757753276515	0	1.59987089209864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5038179-1	2.29099715368979	0	1.4809475218874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81801289-2	2.82038613234919	0	1.48959061122377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14293091-1	1.18392138488252	0	1.65959812485222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75765986-2	2.23916375929751	0	1.45321770597896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136613372-1	4.51148948902123	0.25175588696487	0.915299993858331	0.275052866441772	0.783275622487275	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.36955178159892	3.15997491553188
Merged-chr6-99205059-1	1.89048068541482	0	1.45542273386032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57176831-1	1.59434438526092	0	1.42191546241925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102700383-1	5.0499263216764	-0.846918152346434	0.945590764437399	-0.895649771759697	0.37043984440124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74723369056052	1.41398715281163
Merged-chr17-81533902-1	1.95297339645036	0	1.4493240090902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138069883-1	3.67351687153559	-0.763386823447724	1.06343367272004	-0.717850904133157	0.472849222538952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6737490476797	2.6727091111616
Merged-chr2-155637556-2	6.4708008528075	-1.14659226989888	0.892602500048435	-1.2845496957903	0.198949686940234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56481436735453	1.25298535761957
Merged-chr19-6489210-1	2.02767825777596	0	1.44950415064897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99279084-3	8.89672544305989	0.258592813277463	1.06692223916029	0.242372690141867	0.80849139370287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.662147012823607
Merged-chr12-80198786-2	2.87187056778721	0	1.3866659233565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139466523-2	2.47308891964965	0	1.39409843956948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145348743-1	3.96086430764939	1.53663624955761	0.86717345875165	1.7720056282277	0.076393622957233	0.772097895325325	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	3.37108263075517
Merged-chr15-79808272-1	5.45539584533405	0.503082097083881	0.861354639915881	0.584059194402217	0.559180487218447	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77777167463237	2.64807474181347
Merged-chr16-38506253-1	3.03617172456082	0	1.38045064871414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25627477-2	3.50622928814134	0	1.36941821795876	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-78210935-1	2.68392747738295	0	1.41156858066975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32134218-2	2.63025085632715	0	1.42650180991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25474861-1	2.95614179875577	0	1.39047086024896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-145179790-3	7.85217198313378	-0.434437945371167	0.514859714014918	-0.843798676698522	0.398781915106283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27933162307737	3.82540132791128
Merged-chr13-107797035-1	2.39958095747706	0	1.46502785000049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130454562-1	1.88820250544801	0	1.44920170483058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81760584-1	2.12778160208263	0	1.41474494898295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-13611041-1	1.42281782368405	0	1.5543793910449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150272976-1	5.83033576311095	1.49445948232911	0.776659291739837	1.92421502996673	0.0543276359503204	0.624750573857302	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29915063860089	2.61410668480424
Merged-chr4-105565923-1	4.17808754453346	0.540390962555068	0.897300589777761	0.60224073037655	0.547013907165951	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67333134268571	2.33860409010381
Merged-chr11-106458732-1	2.05343391685888	0	1.43860167678769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120605057-2	2.85751148391835	0	1.41748384472064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183633052-1	3.799199577128	3.96843518470525	1.21708041189101	3.26061872817377	0.00111169414195462	0.0389874721693622	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.84217611280553
Merged-chr13-24813661-1	3.22167612145469	0	1.39530861516085	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-36220375-2	2.4784098673145	0	1.39258965514759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-23040105-2	4.99308039542659	1.37893664111375	0.890501633925069	1.54849422907379	0.121503350081885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.94029111758935
Merged-chr3-88592167-2	2.90165368516634	0	1.40095997673486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28975397-1	3.66365315994314	0	1.36477966526092	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-5100811-1	6.22530798394806	0.627095562026132	1.06734367995282	0.587529184651986	0.556848355649883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69159338225134	3.80325740481175
Merged-chr12-70231666-1	2.49942616278527	-1.39747353151746	1.38275810196612	-1.0106420852139	0.312187765354585	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95953533891209	1.39207274064238
Merged-chr2-6081361-2	2.49798983774264	0	1.50377997079389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19790181-1	3.84822845956752	0	1.3704384819202	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61317149-1	1.75951719677792	0	1.59147330706488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88589627-1	2.43007866591058	0	1.44482208445901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81181455-1	2.2624362454714	0	1.43779075293343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29431433-1	5.18283502891394	-1.23223234678339	0.805246180633554	-1.5302554379257	0.125953513861838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91384368695212	1.6794096906117
Merged-chr12-117747682-1	4.0411712433834	-0.197505213896793	0.770674330426228	-0.256275843244397	0.797737848835615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18565220784089	2.87313040125522
Merged-chr9-61901692-1	1.28588869906522	0	1.50867585086891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123019017-1	1.68561880347222	0	1.50235918500254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21782452-1	2.54576205074111	0	1.44689111608401	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-129928023-1	2.07128296560768	-2.94170069166989	1.60728607398434	-1.83022844488265	0.0672157860388319	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32078820428742	0.67591700901439
Merged-chr2-166698120-1	1.89245514380015	0	1.53257916947984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102607031-1	1.67312484564764	0	1.5118347543983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53853803-1	1.66520396243483	0	1.47288176963435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44375608-1	3.1105917935163	-0.318054825106948	1.11900360018976	-0.284230385901362	0.7762338307245	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33612437467064	1.98957305951408
Merged-chr18-53855117-2	2.64846013821307	0	1.43167071864453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137577360-2	2.29518042528736	0	1.45280544455297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8810247-1	4.43054564704374	-1.89842964598882	1.1562513743163	-1.64188314769474	0.100614222984445	0.914568684470888	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	0.55634759613363
Merged-chr4-150061820-2	7.47584581772601	-0.909770150766933	0.732396131188453	-1.24218317386611	0.214168986332997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.95484384881356	3.00084853421126
Merged-chr10-95766768-1	1.36378823167881	0	1.4471462259587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-13349516-1	2.53117370974482	0	1.39410190841728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-8841050-1	1.9717648777567	0	1.52455701293665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38267145-1	6.17969707420377	0.154006474184242	0.794587338936056	0.193819441410248	0.846317263624826	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97749077568792	3.21066548756877
Merged-chr8-119835162-1	2.19192607348825	0	1.52747972663012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111052910-1	0.967006417171967	0	1.86840076757208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27380836-1	2.26690418104747	3.46411988082931	1.26948267905752	2.72876498275748	0.00635719924127223	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.97113409566745
Merged-chr19-55814644-1	2.3572309461132	0	1.44953997965119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135241307-1	5.4876184145439	-0.814067730632596	0.876401346205151	-0.928875490843936	0.352953616008779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	1.44075340970692
Merged-chr6-125272286-1	1.52642101819068	0	1.58679143852185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83643166-1	2.85345164930577	-1.24562292691406	0.989820652301345	-1.25843295350321	0.208235220463671	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	0.662147012823607
Merged-chr5-115529395-1	2.21860807438905	0	1.40871383944459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92199573-1	3.15615035094946	-1.35504005072221	1.41352875352836	-0.958622205130132	0.33774910207383	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr9-84538303-1	2.47112956762211	-1.02353646662773	1.4057601536904	-0.728101777490808	0.466551285847655	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05801908341688	1.17858215524007
Merged-chr10-8849360-1	2.22505773543209	0	1.42799136936029	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-89998217-2	6.63396087691675	0.0835700977540803	0.715439850980195	0.116809397239453	0.907011096814427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64500873683875	2.04612129124541
Merged-chr8-104051198-1	1.92791076751425	0	1.42649188874153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28676778-1	2.57943787949142	1.34648291249674	1.56298250883079	0.861483033168422	0.388972061901245	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.01161228884919
Merged-chr16-92670506-1	1.62740619149642	0	1.43699697260176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-10089750-1	2.65469840634104	0	1.4044038879044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27358659-1	0.88075002718546	0	1.83601774456803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77836187-2	4.91731934870474	0.681504161224336	1.07453843807302	0.634229672087378	0.525930945793518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92269452602859	2.57935273418352
Merged-chr7-97589645-1	1.45121547003248	0	1.55545157606047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-134696522-1	8.24437118937076	-1.15263527424852	0.60937575725891	-1.89150168925868	0.0585574056998086	0.655908101470409	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25507651542068	3.25446472702544
Merged-chr4-141861447-1	2.11436627867194	-1.66526076836954	1.26135054695499	-1.32022043546072	0.186761431006621	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71394436113018	1.74294609266651
Merged-chr1-136580398-1	2.12156721151821	0	1.40096449955082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24721913-1	1.813767517259	0	1.48780583995061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-161442685-1	3.26341427928301	-1.60137297518393	1.2002897840716	-1.33415529852448	0.182152966029479	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92526156064402	1.18984215491549
Merged-chr13-110678667-1	2.98409880486804	-2.61677369101971	1.21386833268692	-2.15573107935639	0.0311046698695503	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50921536809972	0.41385117919798
Merged-chr14-70972324-1	2.96819450202409	0.363070351930233	1.21400411673299	0.299068468488634	0.764887804349757	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.953310774576147
Merged-chr5-90247730-2	7.34897146896547	0.583016061321506	0.619158405885274	0.941626659316542	0.346383815789389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18317309328714	3.23206064634892
Merged-chr5-111273795-1	3.0820878853806	2.1512556901076	1.31679382037222	1.63370731000202	0.102320322719686	0.925141725126735	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.97908007631626
Merged-chr19-9140585-1	1.68094300854888	0	1.46030737173309	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155851635-2	3.98491295741146	-1.62592388818401	1.27513960429484	-1.27509480742946	0.202275687071731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0.41385117919798
Merged-chr15-72716674-1	1.4652157364423	0	1.52692233019133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12051295-1	1.93841162713322	0	1.46577639692951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7864979-1	2.29018084270611	0	1.41484174267436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-53522918-1	1.22332534823726	0	1.72047162823026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28727765-1	5.17230190277312	0.122544683661692	0.770260960242359	0.159095021021362	0.873594010909136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59196204118832	3.20752684047472
Merged-chr6-87499559-1	5.26938847524618	-0.0558453293161907	0.794069743483917	-0.0703279904245864	0.94393260452114	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30465126446199	2.69057713913012
Merged-chr9-50697798-1	2.0833650668037	0	1.45895290271007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101858981-1	3.82146717917412	1.94789340344372	1.141703380279	1.70612913747151	0.0879840386571351	0.840253752172032	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.40093244346002
Merged-chr17-26499251-1	3.04249993170909	0	1.45737582936605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24164197-1	4.1946291720663	4.0513842973365	1.08429104336862	3.73643619221446	0.00018664678368163	0.00978461930611976	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.44306101831552
Merged-chr2-83621982-2	2.6365806955105	0	1.48159601127782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20831108-2	2.97244785812676	0	1.40850661956308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43391376-2	3.8863059581317	-0.0304051366339913	1.31692134918064	-0.0230880429214005	0.981580043511751	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5122114716189	1.4994506617149
Merged-chr6-97391374-2	2.2880814822629	0	1.57394378430314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-21160179-2	5.41898427554177	-0.248060094977005	0.973215545289733	-0.254887107154824	0.798810294461894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69181239031707	1.28067447403188
Merged-chr15-66815603-2	6.44536028853308	0.479539272028265	0.906002388665996	0.529291399258165	0.59660332102474	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57167815999277	2.52916639857587
Merged-chr15-101258606-1	3.072100716466	0	1.41343074588023	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87528911-1	3.838293933273	-0.867815243501136	1.09740593565556	-0.790787816345032	0.429067820818953	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40343015234056	0.97908007631626
Merged-chr17-34383252-2	6.20284710903906	0.19884789585473	0.898792885737696	0.221238840460472	0.824906468152708	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02473920353734	3.40121800985944
Merged-chr11-116419467-1	3.24534294923362	-2.0226625448076	0.927490652329716	-2.18079022114883	0.0291989361918106	0.416813280580524	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94623723803635	1.02748994520012
Merged-chr19-55563003-1	3.25407497892281	0	1.41208107241018	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53145981-1	2.96859301688652	0	1.38496445624235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115270678-2	7.04906839905055	-0.962830785346036	0.689387843369273	-1.39664601661723	0.162520045177183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58163110970199	2.61624819098347
Merged-chr14-40929366-1	1.62087050308522	0	1.58693250074371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128776969-2	3.35827538604587	0	1.38304303550784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105244372-2	2.00535575869048	-0.74689709350115	1.47322868607228	-0.506979738150784	0.612169035437028	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	0.723581231604105
Merged-chr2-117382076-1	3.55836159633844	0.00695790290285993	0.958490077879643	0.00725923310364578	0.994208020852848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	1.38950137562363
Merged-chr8-70751273-1	2.74756578602848	0	1.40878882228903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30764593-1	2.54255571078693	-1.34405162957334	1.3995838260219	-0.960322350533013	0.336893004661326	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr8-71587083-1	5.89331072003902	-0.357986930170804	0.72236196559893	-0.495578321145392	0.62019195110674	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.45948392692984	2.60022018958955
Merged-chr1-154031078-1	2.47929057598274	0	1.42478199234871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70864087-2	2.62969165808662	0	1.39909117833832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34964704-1	3.71363244556625	0	1.41804030712937	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27115153-2	7.23066217401561	-1.4167192428904	0.647355812372335	-2.1884707232312	0.0286353315762661	0.411524908928344	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53630256557261	1.92385917873864
Merged-chr10-81218224-3	3.85768567959346	0	1.37776408765798	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32658611-1	1.42952056021628	0	1.70218245596496	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16229672-2	2.05256750926395	0	1.53401558516362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154692084-1	4.86618382278566	2.66771683722576	1.092913296975	2.44092266478003	0.0146497915945911	0.263070113631089	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.24049978551502
Merged-chr7-132226857-2	2.83950302861394	0	1.39925842295908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11593525-2	2.24234866303099	0	1.47808100522765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-12139319-1	3.00506567851218	0	1.44285784096477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107585039-1	1.64829102652093	0	1.46502837031026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33994118-1	3.55038807791976	1.02626476449256	0.821975106076979	1.2485350917628	0.211835165686808	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22772873920999	3.52294931757155
Merged-chr8-26123316-1	3.72955636723673	2.03466454860171	1.14776325866609	1.77272145038548	0.076274874887435	0.77160243676066	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.27886469683371
Merged-chr11-11798063-1	2.61516934053225	-2.35659712964293	1.25588955391667	-1.87643660407361	0.0605953522525321	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19869191737501	0.815004392037195
Merged-chr12-86048053-2	3.87773550435943	0	1.39156242945004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-65279377-1	1.98101029840133	0	1.48851083385983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-122315104-1	2.26383029055869	0	1.39640286530669	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130799757-1	3.50131026774819	0	1.43492786307821	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46192828-2	3.79905085800821	0	1.38821844059871	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129258951-2	5.79943260598878	1.30193169290675	0.892473853167409	1.45878973180689	0.144622989626942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.38860239282551	2.40291061254722
Merged-chr9-118623614-2	3.22883759727407	0	1.40220513124459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75456091-1	1.08661419156113	0	1.92894867770589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55484756-1	3.4904853848057	-1.53263669052981	1.30214163253317	-1.17701227903161	0.239190605298312	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17516046326173	2.27435083006356
Merged-chr8-90914211-2	5.73442818180361	-0.799224587795435	0.77295532556985	-1.03398548577981	0.301142948591186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81110452458127	2.99814596750258
Merged-chr4-10972808-1	2.1360113196898	0	1.45789932181292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-6138842-1	1.81218856768158	1.55544702194477	1.55654609646903	0.9992939017182	0.317652338729063	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr11-116100046-1	2.03474659946651	0	1.44061099918314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162226973-1	2.6498115944936	2.59186034998187	1.3566606932027	1.91047058632118	0.0560726500471476	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.82542040892363
Merged-chr11-119235868-1	1.43508052956239	0	1.50903538042689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45401920-1	1.67050409438885	0	1.69912024785197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135952035-1	2.42991630333801	0	1.40872454135003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-73923381-1	2.24622503496855	0	1.60057536246003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74493682-1	2.68645916140558	0	1.40314715747591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100914858-1	1.74418604942366	0	1.54894000259617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5658871-1	2.03166511750328	0	1.42560581866887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184718756-1	1.48743024264623	0	1.58268068928083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-90377626-1	1.80215736946762	0	1.5439530103567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75151660-1	1.58297757956252	0	1.5519998397186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12472531-1	9.05353516599833	-0.516372410796414	0.639570528320714	-0.807373679572486	0.419451226289677	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72852000511914	2.63913964999439
Merged-chr16-11686177-1	2.27185936740621	0	1.41832371354498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-74452928-1	1.63049985335811	0	1.50295200906388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-34942202-1	2.08208507030486	0	1.44290384868601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35028010-2	2.30436188969416	0	1.51630011356744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102540676-1	1.64117897053462	1.99626242280235	1.4454735473357	1.38104389836941	0.167265463556496	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.30139522650344
Merged-chr2-129895045-2	5.79961257575099	-0.701971187621718	0.671954619580581	-1.04467052858402	0.296175270379212	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69946545045264	3.15229101018281
Merged-chr16-21248928-1	1.67596466570643	0	1.53559455487422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-43571469-1	1.09537673490253	0	1.67043430073452	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21049061-4	8.44509735262972	-0.261773289291878	0.552614339113732	-0.473699777156892	0.635714012277904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26193464270395	2.52363634850628
Merged-chr9-121284710-1	1.67792923217786	0	1.50246353910937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-12042192-1	1.91413359776264	1.2899468605424	1.38055319474814	0.934369545084957	0.350113301798009	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	2.69251501153653
Merged-chrX-36851445-1	1.9983254674509	0	1.50660235153752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87133715-1	4.04648582255978	-1.70790396266021	1.07735932071954	-1.5852686562544	0.11290530729643	0.980261874992275	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12114437764854	0.577068348605183
Merged-chr12-25164580-1	3.85584184987905	-0.558510964016577	0.994476556766038	-0.561613001550093	0.574379720155285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00353870693411	1.97075457344003
Merged-chr2-84458120-1	1.52749559615876	0	1.48296713564477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-119003479-2	3.28372598550952	0	1.39875355288629	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137195241-1	2.68633813433416	2.80840083306308	1.43096446095936	1.96259299911631	0.0496934848525061	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	3.06954034036316
Merged-chr8-75101432-1	3.65269580477113	-0.796223788990675	1.11880581727719	-0.71167290757249	0.476667348118713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49898368658353	1.14046671619316
Merged-chr1-184695643-1	1.63695074409149	0	1.64717879157267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-6140292-1	1.52178421317184	0	1.51946993243201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23122184-1	3.68106232830926	0.323502247671476	0.980043600068197	0.330089648714572	0.741332224430736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1872165920609	2.89156171988696
Merged-chr9-7490393-1	1.21090496721034	0	1.88093986892862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7874373-1	1.930352141681	0	1.47756167401329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-24993639-1	3.3003982791549	-0.06281276550057	1.18388530218782	-0.0530564619600327	0.957686920884712	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65719405378217	2.41587522331553
Merged-chr15-14449194-1	3.27928581102028	-1.56112383408981	1.30665986481372	-1.1947438473687	0.23218712541022	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88299958146536	1.46460328489499
Merged-chrX-168415582-1	1.39806461285692	0	1.51321880333891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-142688676-1	2.3928230994269	0	1.44558760652215	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34642623-1	2.1467063158633	0	1.45948899191686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173431209-1	4.97945975272557	-0.953453643396946	0.901397151399863	-1.0577508947263	0.290169025421711	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02779196282874	1.33443165855834
Merged-chr8-36542697-1	2.31752574605153	-0.949371849487234	1.4525539971076	-0.653587991480988	0.513377282924289	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	0.730937814817307
Merged-chr14-27317366-1	2.08200378667255	0	1.46887071183658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13181207-2	8.6958877954787	1.29144428193295	0.633625811619941	2.03818130235449	0.0415318046850856	0.520910791618959	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0802601033517	4.36893858589413
Merged-chr1-78914132-1	1.38393938926552	2.94351126031472	1.30244692373928	2.25998557535381	0.023822146100972	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.21469436624079
Merged-chr13-93940051-1	1.8309213020853	0	1.54103003993381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36518542-1	1.24923985708328	0	1.53832534455326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102711012-1	1.19136678074952	0	1.60615743791847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3640085-1	6.50825358475151	0.353660875733782	0.587869457678511	0.60159763551994	0.547442003187686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30992332074145	3.46890204701622
Merged-chr7-75649240-1	2.10249933777299	0	1.45389448245816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-68690314-1	1.69812410848495	0	1.49827028918447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-24967869-1	1.42437785128825	0	1.48629191547662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-68172949-2	6.33601694426937	-0.390622316596936	0.812778111588606	-0.480601422488421	0.630799804263937	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96739710961373	1.7349297513737
Merged-chr6-134141901-3	6.50663896532833	-2.67482432667891	1.03415709717898	-2.58647775466166	0.00969624290453851	0.19682395472852	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39543092688359	0.716426531808663
Merged-chr9-57433947-3	3.61141639873459	0	1.38401939019122	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99580833-2	3.4302014220824	0	1.39004501488413	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55650402-2	4.50920662374337	0.638243789132336	1.04565592633493	0.610376485283649	0.54161244130159	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.984484304269093	1.18984215491549
Merged-chr5-5270379-2	5.08914366050167	1.70462114551718	0.904930433778859	1.88370407479715	0.0596050149559708	0.663540652875613	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	2.36364322001306
Merged-chr13-111804376-3	2.66265507915622	0	1.40565540709242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-77298827-1	7.83644812496818	0.370922020166183	0.60628074367393	0.611799111280487	0.540670677800899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20213796229157	2.91529699008247
Merged-chr19-57243755-1	3.19903493356862	-0.0361553265763812	1.08137037495967	-0.0334347300551205	0.973327914557331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29451429493117	1.28051966905443
Merged-chr9-114694299-2	2.72747003584626	0	1.42782600179782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73595982-1	2.12516704754124	0	1.39631313290296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118304985-2	2.96376163063305	0	1.39950103201501	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52845454-2	1.79536221942674	0	1.57507925644702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-141134321-2	3.36836990631657	0	1.40193960605662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75572467-2	2.06395323516924	0	1.47900656008307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42448672-1	4.56200057304192	0.726736911801406	1.01918424104162	0.713057445883065	0.475810210447581	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62128842389662	2.29168133223502
Merged-chr11-70482615-2	1.92893031928177	0	1.54099188792252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78360676-2	3.04141028786944	0	1.38244024033973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80656496-1	3.71481606711042	0.353205940907008	1.30983508561183	0.269656802437861	0.787424296407301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.815775955292901
Merged-chr15-4731062-2	3.55370675222886	0	1.38494091802006	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34751714-1	5.08284529068702	-0.505736895603569	0.730731554909879	-0.692096697077687	0.488876605757779	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33301146174604	2.29878697443428
Merged-chr14-21068814-1	2.74449766958458	0	1.39697124017733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84391119-1	2.08693176298898	0	1.45446611689188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46136349-1	4.65228073343984	0	1.39085287570186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12965347-1	2.60118587848746	0	1.43012897839747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100147909-1	1.58663751170151	0	1.63523813609136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131076716-1	2.58906352636556	0	1.48191530768416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104990922-1	2.65165380498132	0	1.45474402904244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25582749-1	1.70515312803902	0	1.45652859082955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100298443-1	2.51746887851617	0	1.4592400052588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121789806-1	2.43171018024739	0	1.40074902794981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-101527556-1	2.57851046322326	0	1.44551955217131	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16201300-1	1.92539183145039	0	1.4459310423757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-4541081-1	1.34372077865328	0	1.71839152000214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27754519-1	1.23108312056867	0	1.58046561085564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-18555846-1	3.35112401389932	1.480171514545	1.98915383019167	0.744121189663033	0.456803161049431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.67113172082159	3.27073925462492
Merged-chr8-20321398-1	1.06292727743753	0	1.54376334214235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55901818-1	0.908985793869671	0	1.77174861972994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14526202-1	3.63903281731089	-0.691609116266091	1.40858824623065	-0.49099452456516	0.623430320209792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr12-36117328-1	2.18575666375681	-0.178465907210835	1.23081911713814	-0.144997672465307	0.884712709473912	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69017997474274	1.62069611143677
Merged-chr5-100917579-1	2.93109418836931	0	1.38650037781224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-52953568-1	2.28525636314096	0	1.48057472627619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103055018-1	1.96918403257334	0	1.48984014196562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-27185185-1	2.73164176849769	0	1.3922880294111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46511909-1	2.72712209136274	0	1.39859514701349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102017418-2	3.00662441430036	0	1.41482771782362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-124257876-1	1.56180960561918	-0.902950072708554	1.73774727932707	-0.519609544753951	0.603335744175873	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	0.55634759613363
Merged-chr19-40391672-1	3.08045100580468	0	1.3865084909366	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19416910-1	2.88328963557914	-2.40643963756446	1.21779312139625	-1.97606604544242	0.0481472974597676	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	0.41385117919798
Merged-chr18-8757614-1	1.90748268275799	0	1.50627582824432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-75638529-2	2.95351039996103	0	1.40680786246886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52262353-1	2.44541416398181	0	1.42652131176268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42888319-1	3.23216701301361	-0.11999536886691	1.17706797701398	-0.101944298214041	0.918800888210169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03074619307863	1.67273088548657
Merged-chr10-100020633-1	1.45461609816475	0	1.62498386454934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36494130-1	2.56420397957405	2.73260725379609	1.22594940476001	2.22897229134102	0.025815748465659	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.57989517605929
Merged-chr10-76425884-1	1.71135272351628	0	1.54421601882495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156482445-1	4.2888769551755	0.952971595588294	0.821847963796785	1.15954730992548	0.246233163991078	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30999519426894	2.668751009228
Merged-chr15-27785431-1	2.00300021634306	0	1.46966831486579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139795048-2	4.1338443873297	0	1.45354527122562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-127488791-1	1.19320360811221	0	2.04551217620031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122091253-1	2.00340204490325	0	1.49162026522456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75033408-1	6.25639597346283	0.622997040052683	0.812356109305902	0.766901403111239	0.443140139379703	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72355994982429	4.41403993665686
Merged-chr15-47801416-1	3.79585893433284	-1.00197113168054	0.989917128652026	-1.01217677993402	0.31145353641241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.73421854905292	1.83592917254717
Merged-chr11-48856116-1	5.07824549407273	0	1.36282704275227	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24067009-1	3.55702604151738	-0.303403631509128	1.61522663067949	-0.187839666425938	0.851002339878066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36481542333654	2.89104251886087
Merged-chr5-140751276-1	1.4017595774564	0	1.46869325467369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-80866458-1	2.5199961385465	0	1.49366226517617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-98713073-1	1.74713066789148	0	1.43739129252571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63452743-1	1.96166870356711	0	1.47778446365525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17812332-2	2.7915797035787	0	1.4312225192781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82834141-1	1.7992702511013	0	1.48295668093646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78849412-1	2.7031302723116	-0.481313130204984	1.34044771072491	-0.35906893372565	0.719543521274421	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61389506311823	2.3017310831097
Merged-chr13-107940434-1	1.53846091083749	0	1.73148521579091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27563617-1	1.67583410705805	0	1.43132131824833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120936849-1	1.91053586093805	0	1.46014204701193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-98799834-1	1.91003195939884	0	1.47426657863591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-31563797-1	2.45865347574721	0	1.40656531241853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-156134241-1	1.83672082436361	0	1.50821762320679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83574444-1	1.11899049899917	-1.91125902743455	1.65774624724216	-1.15292616744821	0.248940690523592	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr2-115856053-1	2.46225327867071	0	1.43307317994095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85391947-1	1.65538849655213	0	1.52355709104757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157696349-1	3.17167091664103	-0.37194054709078	1.14475334713033	-0.324908896770786	0.745250023251485	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.18909650862134
Merged-chrX-23600948-1	1.6652378842336	0	1.45686917702095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66147421-1	1.43284626307335	0	1.80459594810681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88921597-2	3.28738059106247	0	1.38794933334211	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47703249-1	6.14042681068594	0.179607911152383	0.6325568787249	0.283939543135527	0.776456712016785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75421478449417	2.76674266300314
Merged-chr4-150582632-1	2.81317630274657	-0.0369863530773352	0.92672472012052	-0.0399108303407782	0.968164216620497	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05572638891514	2.0273925908393
Merged-chr14-54493459-1	2.20767504583269	3.27240862031016	1.22877731340675	2.66314212071306	0.00774147101475833	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.17582184959666
Merged-chr19-59114454-1	2.0489767005609	0	1.4311643173823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32035914-1	1.13811980137245	0	1.81934089049356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102741678-1	3.1663042757566	-0.292015156941273	0.901828801657247	-0.323803316554817	0.74608694511934	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59083006002438	2.00836863046658
Merged-chr2-104670726-1	2.78585881590243	-1.79686967740394	1.17010142109071	-1.53565293146041	0.124623524816771	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42760559021134	0.97908007631626
Merged-chr11-99133569-1	1.41815167019551	0	1.53627749084861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113602084-2	4.49784223789615	0	1.37458770573562	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102774069-3	2.97962455108465	0	1.40041019200569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132328587-3	3.67774032339081	0	1.422340401942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115984286-2	3.03641692020708	0	1.39240427408492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78589759-1	2.61341645455244	0.54563330958236	1.06835111491533	0.510724706479668	0.60954383806582	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.21849460895724
Merged-chr1-128675739-1	4.15833950695758	0.461583275673082	0.887675353778712	0.519991091008876	0.603069784541722	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	2.27886469683371
Merged-chr15-33185412-2	3.38641142675709	0	1.43781705945906	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34522438-1	1.87603993255622	0	1.43831621353731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32340600-1	2.2062258978084	0	1.41725675389828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36028150-2	10.5259933383447	-0.535457335467526	0.619253609843204	-0.864681815263224	0.387213453095686	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.54340337101687	3.69759422670443
Merged-chr2-30436337-2	3.74362625791478	0	1.3848571075509	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12389240-1	2.18161240547873	0	1.44026769208379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-41017663-1	1.37891414110245	0	1.56082503445257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50392860-2	7.8256934852721	-0.460006103925224	0.64548868250303	-0.712647822331207	0.47606371144983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.8664307006184	3.51289240093082
Merged-chr2-93192809-1	2.00442346020276	0	1.42564827766619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139585260-1	4.42792410838761	-0.913466947864679	0.934457675801489	-0.977536994472429	0.32830337218352	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21307952544685	1.28129123231014
Merged-chr16-37854842-2	3.71087941028257	0	1.38079678206314	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3001352-1	2.18025679706633	0	2.42964531165889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61416863-3	3.2225001119735	0	1.37948537511214	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-73568530-3	2.40296132685874	0	1.45896831433259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171166135-2	6.07274880804772	0.194030510106641	0.801621089072509	0.242047661609225	0.808743232384379	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00209435585126	2.10217503392579
Merged-chr11-95689164-1	2.23341915325319	0	1.45911075659869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99279729-1	1.57882434157853	0	1.46429182889133	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70923857-1	2.71085044082285	-1.0295646054181	0.995890282435574	-1.03381328603807	0.301223459265001	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30039026721351	0.838451940269823
Merged-chr3-15582442-1	7.10692597035407	-1.29405257154428	0.958220270527159	-1.35047505395849	0.176863650263888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.48750699431214	1.96322264098
Merged-chr6-48830591-1	3.67930025122904	0	1.37517632912688	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60114432-1	1.66652602559082	0	1.44311743418703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82780567-1	2.75994189618419	1.01174629495459	1.34477541267577	0.752353356120234	0.451838588925422	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr13-63845959-1	2.25277452765283	0	1.52768524405748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62223604-1	2.86443831779646	-0.403534354254383	1.16352351395823	-0.346820970451715	0.728725821713056	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15658857927843	1.02748994520012
Merged-chr10-85829436-1	1.72350201655008	0	1.43562656668855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96966362-1	2.04839637567814	0	1.47716643251949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37047279-1	1.07002439795526	0	1.86770942019255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42458083-1	2.30726407070578	-0.653134542538186	1.43490554523841	-0.45517598332904	0.648982637207077	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.577068348605183
Merged-chr7-125582325-1	3.05046022802788	3.35814494201541	1.3512276642787	2.48525472856422	0.0129458762925303	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.06876131291247
Merged-chr1-8697128-2	4.20412701707787	-0.750722226392541	0.976132962595043	-0.769077835868538	0.441847104952551	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.00865537380463	2.86824525400738
Merged-chr1-152585138-1	2.0487671926755	0	1.59758349566712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74348981-1	3.6007986423983	1.36003202111565	0.894605789654087	1.52025846115028	0.128446029543675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32852444445417	3.17803837707925
Merged-chr15-97593911-1	1.32672456361619	0	1.49558808711828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76075568-1	1.77256819542628	0	1.46995533155033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154517924-1	1.41390835133418	1.87098774704316	1.51430911411926	1.23553885372429	0.216630025536013	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr6-108664988-1	2.19889124124991	-1.19904962537019	1.27519919313889	-0.940284178206495	0.347071813041745	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	0.600815099743027
Merged-chr17-31288843-1	1.52737255673687	0	1.57502641216168	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132411847-1	3.22143288603964	0	1.41658142489968	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21449486-1	1.61911937814387	-3.21174048113757	1.73417090951061	-1.85203226713331	0.0640211895780092	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92797716160218	0.413263464506793
Merged-chr1-135771046-1	1.94555694770462	0	1.53161924454355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-140158769-1	1.16417565850918	0	1.76422225426583	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4344544-1	1.92266370007333	0	1.47148727005517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136548569-1	3.01451149438495	0	1.40448970007716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115898092-1	1.16844885883421	0	1.76565661962135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-147054752-1	1.71369834552533	0	1.50015323872037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103962516-1	1.39550794199927	0	1.56444459916715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111131922-1	1.4101530635391	0	1.58040389610129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-78276598-1	0.95689733029102	0	1.85337829463649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133457670-1	3.12592112145943	-0.159024450763687	1.27567081887891	-0.124659472028561	0.900793143681387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9450324219075	1.01784625364355
Merged-chr1-40354802-1	1.5181884764821	0	1.44809102370246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69204873-1	2.30874951253914	0	1.40716316637858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128701176-1	2.09553871999833	0	1.60036121251818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50975137-1	1.10108181133799	0	1.62095758088758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16194386-1	2.3900520850117	0.621403625513063	1.17858373029269	0.52724605773978	0.59802272830207	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72220530150145	1.73795749839718
Merged-chr4-133962831-1	2.82454944636541	-0.753402950489839	1.31463777994562	-0.573087858863301	0.566585207402036	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42436654726916	0.904676873936758
Merged-chr12-17733577-1	2.99837050159082	-2.85274677511935	1.45364624894375	-1.96247661849794	0.0497070201814178	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12216108640681	0.303163067301871
Merged-chr6-47799262-1	2.9723159545363	0	1.4177535403839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51704812-1	1.0785918718161	0	1.54063240900519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43494178-1	4.41435225718539	-0.262589730279068	0.800925719286614	-0.327857782508168	0.743019195592183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38206134385925	2.32759591926102
Merged-chr9-65124021-1	1.0053852304135	0	1.56522898723466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5850435-1	1.93976666814989	0	1.47991335420007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71258762-1	5.16145241011224	-2.25501076920508	0.807962477071578	-2.79098452366038	0.00525479848123223	0.127977415161874	C57BL6J_F1_Control-BALBCJ_F1_Control	4.32651383310632	1.55926189265627
Merged-chr9-41054547-1	2.32775213067481	0.914794410946106	1.27899391967624	0.715245316551366	0.474457471719052	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	2.18034924692091
Merged-chr18-34163206-1	2.12862560426803	0	1.4309917490481	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133857623-1	3.37646548199337	0.370746640098608	1.11673400566972	0.331991896204743	0.739895378201387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45575152610536	2.42698818581862
Merged-chr7-25652562-1	1.62092320060037	0	1.46344694474754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-128354246-1	5.03512540307509	0.321019097420177	0.849311543474908	0.377975667334917	0.70544867008129	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	1.85699717634292
Merged-chr14-55458471-1	2.33338338038801	0	1.48595860467607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46628082-1	0.987041540944054	0	1.52990908754366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81742004-1	1.69069156324187	0	1.56195180518909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40205563-1	2.52941010897768	0	1.50849978178311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123361774-2	3.76274100951358	0	1.41675170424323	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-52064587-2	2.91710731781069	0	1.42396986549253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80159020-1	3.48963532307823	0.309177248141354	1.18214150062021	0.261539966221593	0.793676133120643	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.08976818821237
Merged-chr18-36720581-1	4.85039828968894	0.179678102020141	0.76214859124128	0.23575206211102	0.813625068562776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95040317292908	1.97194432603249
Merged-chr10-80535353-1	2.14192044154124	0	1.43249442539349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57684810-1	2.12173530726932	0	1.45040986963466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134270828-1	3.03339137075686	-1.13782111398513	1.3954972955933	-0.815351715534052	0.414871014273715	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88513399620689	0.882176137820124
Merged-chr15-98978067-1	2.01995748022829	0	1.44931477457261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56177901-1	1.81569509080079	0.770999074226992	1.58420024564896	0.486680314780002	0.626484897515026	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45063110846411	1.88236512251373
Merged-chr8-23262031-1	1.38687315957669	0	1.85444322384779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82165450-1	2.57555356329813	0	1.47501618327942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-79288961-1	1.22828431468459	0	1.59058761167208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108854597-1	7.09907800695919	0.558458763366398	0.570344358410326	0.979160668693112	0.327500598912166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07640642364671	4.27045383862251
Merged-chr3-65385978-1	1.56951425925663	1.68759854307341	1.56385076642912	1.07913016977116	0.280529703610709	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.859510663435501
Merged-chr1-57436530-1	3.12629177302632	-0.647428135417482	0.931472466379241	-0.695058800754598	0.487018452488914	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01243752527112	1.25298535761957
Merged-chr5-31821351-1	2.01424816955572	0	1.4218753388891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-106498352-1	3.16161400309916	0.496189241736299	1.1669430535218	0.425204332155554	0.670687726390069	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.730937814817307
Merged-chr1-10266992-1	1.33764482857237	0	1.52684450542428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50137036-1	7.53931295379472	-0.172700541282326	0.649743295461067	-0.265798112098679	0.790394697260987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4826808895428	3.5204145197946
Merged-chr1-178391548-1	2.37124399314261	0	1.42602832801975	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-53070811-1	1.9533215988758	0	1.55999911129019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122343915-1	2.77352834342142	0	1.44000224184218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-32347801-1	2.04061674357618	0	1.50539608761277	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33621526-1	1.69028350737749	0	1.57399599142743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50161706-2	3.44445689593095	0	1.38660672924834	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87723791-1	1.77760010761249	-0.255365082115474	1.20089850089762	-0.212645016980702	0.831603855886752	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.10056930386922
Merged-chr19-45644660-1	2.45826213061772	-3.03439383202915	1.48038085281069	-2.04973863737022	0.0403899424655719	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	0
Merged-chr18-75579054-1	2.89157647123874	-0.924105568118449	1.03799556768092	-0.890278915335912	0.373316139733757	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	1.8538004573626
Merged-chr8-70038186-1	2.3647801322746	1.52788676055923	1.49259054455156	1.02364762133628	0.30600174362374	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.02748994520012
Merged-chr16-37533567-1	1.60262525216066	0	1.44456982469898	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-108105716-2	2.97683268158426	0	1.40151590029742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45911812-1	2.28422173054513	0	1.40603123777382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86079496-2	3.76756104381867	0	1.38418879669755	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114380856-1	1.72647871112703	0.60285697639113	1.5735912182001	0.383109011678832	0.70163893810979	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr2-137571081-1	1.85586831840772	0	1.50301191491797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99440380-1	2.20708204489128	1.36905753548006	1.19261330050855	1.14794756598494	0.250990210299877	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.5608848804954
Merged-chr3-127795146-1	4.8037194766455	-0.422809486119926	1.12642796059193	-0.375354217856723	0.707397048726849	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	1.18984215491549
Merged-chr2-151941430-1	1.83544145429629	0	1.56673152079399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192742118-2	5.86281528118933	0.479343656432327	1.02016240774818	0.469869946972846	0.638447936874507	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7337995627857	2.72856224016937
Merged-chr10-79850156-1	2.79481914461349	0	1.39983048175896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-55459062-1	3.10263092509315	0	1.42244263896766	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145305695-2	8.98324739841092	0.883416410536274	0.457076528157964	1.93275383029725	0.0532665304065137	0.616067090716527	C57BL6J_F1_Control-BALBCJ_F1_Control	3.76658960558365	4.58187739616474
Merged-chr11-17154207-1	2.03122651477251	0	1.44380669896533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-93494209-1	2.33657608403818	0	1.40746998557705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-28174441-1	3.03081618911045	0.0825240765859723	0.947271351669661	0.0871176737695226	0.930577977159164	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57132087663558	2.58934039553399
Merged-chr7-30271445-1	3.61818977375479	-2.73329225761826	1.70444609325294	-1.60362493624059	0.108796750772207	0.960572215286905	C57BL6J_F1_Control-BALBCJ_F1_Control	3.50652811557187	1.10718024078827
Merged-chr11-75325607-2	2.41933716299399	0	1.45025779870038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118157904-2	3.27666023624924	0	1.3903927065302	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-39629297-1	1.51250116355026	0	1.66720579030808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-90490150-1	2.02115261317575	0	1.41451974117712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47074625-2	3.02539194186094	0	1.41719776456555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-82021652-1	2.3107318315898	0	1.47595112281825	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75538003-2	3.10851199906657	0	1.40143407401449	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137338651-1	2.92878545674215	2.21832399889737	1.2665758245203	1.75143402862401	0.0798711757550542	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.815775955292901
Merged-chr6-117828445-1	2.46793493214222	0	1.39109240387719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87215537-3	7.93081786050331	0.400462383678373	0.582815419121109	0.687117002295982	0.492009000803488	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.581379703232	3.71974554549903
Merged-chr14-46872867-2	6.62442147843053	2.11431602565795	0.807984392158665	2.61677830187932	0.00887639720380867	0.18536768175253	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24876900881727	3.35358122800228
Merged-chr2-19528973-2	2.86661243350903	0	1.42005123518374	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121961943-2	6.71133332407451	3.61099502782113	1.1293769425935	3.19733376132936	0.00138704334539476	0.0465421538347617	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.27026908475276
Merged-chr5-147052125-1	1.3528750080134	0	1.51977090433031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-43096488-1	2.01848383633859	1.21380012540488	1.39349253252209	0.871048891240211	0.38372745838894	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr12-25530700-1	2.99945607260029	-1.84608586053074	1.41197017158248	-1.30745386672136	0.191058613122003	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr19-21849445-1	2.1284205921463	0	1.65687618568486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32911006-1	2.6455879981372	0	1.39306431636351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-10462257-1	2.44625871855381	1.81468390953681	1.51361019802506	1.19891099564775	0.230562555747597	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.55008632225961
Merged-chr5-123713029-1	2.68741874043803	-1.21028864971916	0.978629371012383	-1.23671809325233	0.216191759147523	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15652556329347	2.58934039553399
Merged-chr7-98962722-1	2.34546319414594	0	1.4960130607443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16526316-1	2.39199128435268	0	1.46155837064655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79766439-1	2.85986561910482	-1.255666136672	1.43808885103569	-0.873149204771102	0.38258175717602	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr12-102162998-1	1.7698788089777	0	1.48750934663418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94381833-1	1.89989482687676	0	1.45052924652248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-63659874-1	1.18065453519902	0	1.59329094536248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87523699-1	1.46559576926541	0	1.51812247497082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-82784945-1	4.10690985733989	-1.27377440002265	0.913100457666004	-1.3949991913032	0.163016083429362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09906948643778	1.79408446835346
Merged-chr17-23200094-2	5.1877033685124	1.47874480714504	0.784572986929593	1.88477660049458	0.0594600054127729	0.662604845066199	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.91672342845487
Merged-chr16-89906016-1	1.25169005205487	0	1.54833111416854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99184312-1	3.59222294772279	0.0856141388539835	0.9705609017069	0.0882109908851842	0.929708981908715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39912876297954	2.38996980507008
Merged-chr16-33667345-1	0.906705155176591	0	2.0921377002216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47244386-1	1.99723452332355	0	1.51313897435083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84015808-1	1.40562509190937	0	1.6906219112006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3381473-1	2.80277964153042	0	1.42720503542811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67982564-1	3.67589901714576	-0.522651585096329	1.17768203809448	-0.443796855339659	0.65718946217124	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37850366884776	1.79102892550478
Merged-chr1-156585606-1	6.35835808082625	1.20833570492384	0.690320986499562	1.75039688573137	0.0800498530333068	0.793980374298403	C57BL6J_F1_Control-BALBCJ_F1_Control	2.49084597027501	4.1372964859451
Merged-chr8-31230039-1	2.80817922793167	1.57985129880609	1.29827028590234	1.21688936114566	0.223646313967023	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.20232890637792
Merged-chr15-63923239-1	2.2652087982477	0	1.59725884017954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75331299-1	2.8070940382175	-2.76062132736052	1.13859430710561	-2.42458732678737	0.0153257968905491	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90027688847863	1.14143228603163
Merged-chr1-172321155-1	4.36281187680611	-0.0528264623269462	0.861269285908938	-0.0613355929338591	0.951091945089695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0879850761916	2.62915185672569
Merged-chr5-64327394-1	1.09785234646779	0	1.75369678513725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92986889-2	3.06963894195407	0	1.40202860965185	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-16219249-1	4.02026106814506	2.76716333679374	1.2076846944402	2.29129618809685	0.0219462889320582	0.342397388178413	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.44790810950236
Merged-chr3-87411379-1	2.18103778420512	1.77948638491256	1.41633310713341	1.25640386145753	0.208969582338906	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.903978167044898
Merged-chr9-111497271-1	1.86998462156723	0	1.43994746569447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34621583-1	3.84162334637472	-0.162356068910217	1.32420008263483	-0.122606901358266	0.902418389187647	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	1.18909650862134
Merged-chr4-59850373-1	3.12392573252458	0	1.40989525170321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123860605-2	3.21712776594418	0	1.4000738972677	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-5469360-1	2.65218325234345	0	1.39176433376369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79339202-1	2.70378208329265	0	1.41019011465165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-89585783-1	4.7247073718723	-1.05768669892938	0.687471523073333	-1.53851710715377	0.123922228988839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.41295010315655	3.43921971473709
Merged-chr5-9012874-1	1.77218826951992	0	1.43691685256453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24741766-1	3.72736115114229	-3.63815156612855	1.11959272319355	-3.24953127218531	0.00115595367680041	0.0402024861914226	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96432250261784	0.303163067301871
Merged-chr3-10260018-1	1.40956294354848	0	1.51796847723074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74738435-1	3.38365495300531	1.31026744503766	1.14219766673741	1.1471459653567	0.251321299352451	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07938469868934	1.61055102041193
Merged-chr9-55589240-1	1.16922193303037	0	1.76912895769201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105410219-1	1.80609154955483	0	1.61090179223617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20852772-1	1.32630559693038	0	1.75421993091021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65026375-1	3.91403050586761	-0.818247933653753	0.872694878844926	-0.937610559531141	0.348444582765694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18317309328714	1.6776376524744
Merged-chr17-50033388-1	1.14774432267918	2.42365919011948	2.45073895647403	0.988950366874848	0.322687425994883	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.96748130499275
Merged-chr2-68970680-1	1.42603909793014	0	1.69818581540557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11094712-1	1.12052981341092	0	1.6392774842577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83779190-1	3.78853146734897	-0.0387957784184988	0.813576077732987	-0.04768549553055	0.961966893842331	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05402110133586	2.03009722200694
Merged-chr11-114205362-1	2.04486627690792	0	1.47611096378946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-19401210-1	1.56112580103728	0	1.4869459295358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57786668-1	1.46222231510689	0.952390134749472	1.61865831839235	0.58838244237696	0.556275620009586	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	1.80983313002686
Merged-chr2-6674580-2	3.0223595031183	0	1.37463130989232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22693191-1	1.21113246693711	0	1.67450129622753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48580946-1	5.98053810865406	1.07070206883323	0.718169919543302	1.49087568233727	0.135994136944362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35461024226286	3.59544131007322
Merged-chr1-152602007-1	2.52755947441652	0	1.43039535447132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55525669-1	1.38597388218153	0	1.54624114423433	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106723043-2	3.37352975219092	0	1.39576054625988	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93781148-1	3.29586995095832	0	1.37890346646381	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61231878-1	1.48009382387821	-0.936766954066644	2.38488703721367	-0.392793008410619	0.694472368980822	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr6-136703227-1	2.5339662034731	-0.934201681243751	1.18138486659202	-0.790768281922111	0.429079222056123	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47759419528723	1.44422453547533
Merged-chr16-22114009-1	2.98114590939526	0	1.40227164117121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85648733-1	1.31010414176201	0	1.83403846128044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54927632-1	1.75639053989012	0	1.50301537521852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-9882089-1	2.33502216087958	0	1.47614977404561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-170174671-1	2.74911910924529	0	1.42647159382381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146303659-1	2.91316108515674	0	1.42215153309421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135794671-2	4.16199923491248	0.580505717294268	1.38402517953866	0.41943291630559	0.674899772024142	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.71701424649985
Merged-chr17-9764921-1	1.10934554299779	0	1.66928959423627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-102132665-1	2.19031185237859	-1.2449834355264	1.39920345814096	-0.889780130461182	0.3735839576304	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42539729206526	0.465515277017237
Merged-chr10-94623807-1	2.11031255899755	0	1.52589501329724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103802706-1	2.31242881242547	0	1.43184818692158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110567713-1	1.65797232983337	0	1.61084913963892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69709834-2	2.74634735426676	0	1.48972669984767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148934536-1	3.12385070235325	-0.57026996768118	1.21185208143561	-0.470577206919195	0.637942687661597	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	0.723581231604105
Merged-chr5-28094120-1	2.6734772546664	0	1.39118088906129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98031576-1	2.68675671034957	0	1.42869782010533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-28945309-1	1.9210880384998	-2.05821182783426	1.52286857879694	-1.35153607900968	0.176523770671454	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	0
Merged-chr3-14824896-1	2.09663367842455	-0.361510584921958	1.34227951193135	-0.26932586075295	0.78767893316132	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.723581231604105
Merged-chr7-35546053-3	3.7181141142325	0	1.39251806719737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92353351-4	9.67019426588619	-0.541474710601134	0.463822760841417	-1.16741729021415	0.243041891980744	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.35953274502709	3.7352081417331
Merged-chr2-51991666-2	2.84349476100525	0	1.44045637257091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105706277-3	2.6614455579461	0	1.42042537757711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59853562-1	8.37258190852836	1.47841790281496	0.646680181351556	2.28616547320977	0.0222445798279716	0.346077022000202	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1506673546956	3.89176412825183
Merged-chr5-122970253-3	3.64312522971128	-3.074651252366	1.23121378792148	-2.49725212837047	0.0125159932096259	0.23598437316249	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	0
Merged-chr16-91741072-1	2.17082714753008	0	1.42308157640704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38337404-1	2.52929466870289	0	1.43623340786585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-29821152-2	3.08417402470976	0	1.41838528600552	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73791983-2	2.16977524379586	0	1.46246968225616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124912625-1	4.06268378262569	-3.43689565455006	1.20019311972718	-2.86361886104739	0.00418831640973681	0.10873064478047	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37050276895449	0.465515277017237
Merged-chr7-30341481-1	4.79890867899436	0.377998373680075	0.925935730900359	0.408233920633474	0.683101947078329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35700371934843	2.0616452534421
Merged-chr1-59883985-2	2.71831129259499	1.83821807145743	1.34677541985917	1.36490319347353	0.172283478426884	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr15-59046932-1	2.21110658540432	0	1.41375816374576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23730034-1	6.12321680421647	1.22874566324101	0.718184364743885	1.71090561638612	0.0870985376600145	0.834966868845293	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58638522975775	4.40476855861309
Merged-chr16-10978530-1	2.69176163373297	0	1.40257711770058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-160268578-2	4.78097899146823	-0.37701581555423	0.941098527189613	-0.400612480693288	0.688705455361393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.428339764855	0.94927122251658
Merged-chr9-62040349-2	2.93785279081437	0	1.3956475344043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-33115007-3	2.73293021267057	0	1.40600495477577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5866825-2	2.36343154194197	0	1.4777535151676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45516734-2	6.75975515512922	0.232195952773302	0.563595964814091	0.411990090897642	0.680346686226195	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32607339166763	3.50563299535206
Merged-chr11-85706691-2	2.45172801264558	0	1.47080060482748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105092824-2	3.84880763973714	0	1.38656108168188	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3002740-2	2.17571980422891	0	2.42670283666682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81359431-1	1.27918697598241	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9411105-1	2.02029201576521	0	1.51393832543596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35999533-1	1.73576978593191	0	1.51894918955009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124280180-1	1.3480422368991	0	1.60478582806863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-118419694-1	3.02864149987012	0.897410515503973	1.09142861539525	0.822234732391535	0.410943314805147	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11812572528152	1.51301315377886
Merged-chr1-173870999-1	2.27730713651453	0	1.59259698650956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113128893-1	1.70429801144273	0	1.62443655403487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-31118228-1	3.09277741890837	0.961665413851101	0.937533748023717	1.02573951698086	0.30501438221437	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	2.44306101831552
Merged-chr1-36613243-1	1.83805709665387	0	1.51331761744552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159199610-1	2.19670386028369	0	1.43843845039455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-15989100-1	1.32660703203648	0	1.49202227381748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-115597737-1	2.9153649651512	0	1.46830440504352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133277176-1	1.73958238928285	0	1.55552732990387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32907433-1	1.2299963565071	0	1.51148516039139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51673662-1	1.9925178632451	0	1.45159046452359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105470897-1	2.47568119283739	2.64219705281126	1.39833018169241	1.88953731200552	0.0588198680449465	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	2.85963524819479
Merged-chr8-46242106-1	2.69681601846579	0	1.40254547372137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42436520-1	3.68815241616062	0.601171196933476	0.991757881739078	0.606167299501874	0.544403664892444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88787614081909	2.70168747513087
Merged-chr10-20395992-1	1.04429700016363	0	1.73663652036115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138090397-1	3.16297628334312	1.36901097064844	0.940215241479273	1.4560612402906	0.145375691062821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60308582214967	2.80845561404415
Merged-chrX-142716227-1	1.12998163031897	0	1.60744045650162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35721982-1	4.58549087762835	-0.0189101868811361	0.857329111397483	-0.0220570917629424	0.982402413953505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07620191520932	3.54601921717271
Merged-chr17-8936818-1	1.30729787846111	0	1.50204707489493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43771705-1	1.2364277171252	0	1.63481241338776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83706096-1	3.46322231372547	0	1.37169378672443	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72866186-1	4.58009705897941	1.04909108510817	0.982749741265379	1.06750583699709	0.285743479275517	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	2.52906575874554
Merged-chr3-89448985-1	2.39570123499686	0	1.41698928434745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55481755-1	1.41581808874019	0.999141650662256	1.70864374621759	0.584757151907204	0.558711019097016	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.70133746420996
Merged-chr14-121280940-1	4.30467639132592	-0.254361531783018	0.817618782305307	-0.311100401908376	0.755724295622948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8914038803831	2.80193985866009
Merged-chr11-51565273-1	1.41586042841907	0	1.5268323115862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25615967-1	2.72774485978375	0	1.43813908582967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27326016-1	2.02688054749892	0	1.55410641109294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45767857-1	6.22845492188383	-0.801598564969801	0.716465483981785	-1.11882370175725	0.263215358037952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.5392607781143	1.91178115877367
Merged-chr12-69531943-1	2.60370165147056	0.555028258803467	1.13608878774852	0.488543030077263	0.625165254540659	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	1.6454950719498
Merged-chr6-83518816-1	2.17140127509706	1.79360423228548	1.3625087001897	1.31639837017977	0.188040369180136	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr6-53623989-1	2.57432830180188	2.10173626665306	1.47934251668133	1.4207232219405	0.155397238804234	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.882176137820124
Merged-chr4-3799349-1	1.60098388416965	0	1.51746240137852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29620984-1	2.94609060222731	0	1.40867616488689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45587440-1	2.11955062451937	0	1.494263001008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26489604-1	2.34488519769373	-0.0988569011069174	1.27801696574669	-0.0773517909045595	0.938343691102826	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27911570690487	1.27673210875742
Merged-chr17-71097343-1	2.42851082502173	2.20959100290419	1.21573041651889	1.81750079859901	0.069140466137162	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	2.16539704473273
Merged-chr10-56754846-1	2.07623773569413	0	1.40731895176804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-105596508-1	4.11978355397965	0	1.39167537889935	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-79119569-1	2.51787473312893	0	1.45742351948871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-26202922-1	5.09416393609982	-0.144045038021779	0.848545909438229	-0.16975514986236	0.865202700115362	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.6288623365984	2.92368040154904
Merged-chr5-143516891-1	1.30243969313513	0	1.5693407552357	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117487638-1	3.05004836956241	0	1.39945397409056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76954684-1	1.90298553022807	0	1.4410873718191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72082620-1	1.56757683472896	0	1.51535310280274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112113886-1	2.41166159236615	0	1.42178541648711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55531619-2	2.60514389337182	0	1.50627286110302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42900745-1	3.15754597455601	0.613219201418354	1.16959441431983	0.524300726739505	0.600069391503943	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69334296600841	3.38449276693214
Merged-chr2-93199688-2	3.70115680574557	0	1.39042712579728	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-92365393-1	5.70613685101075	0.783325340849524	1.14569669545894	0.683710919263621	0.494157727005637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0991499147123	2.14430615128682
Merged-chr15-23591016-1	1.14694324222808	0	1.63430003925566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-160794489-1	2.14056634450648	0	1.46264471701684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17735542-1	1.73274779867168	0	1.49653982686966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13469388-1	1.2221829946922	0	1.63526162361214	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46825206-1	1.66611734330494	0	1.54169167255602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129490782-1	6.47867595709959	-0.646164826420498	0.523565341450795	-1.2341627209891	0.217142275611059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94646460166749	3.33168360395137
Merged-chr15-68238331-1	4.3475750857716	0.524115875557648	0.891230498716577	0.588081171270962	0.556477810618174	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14105961353458	2.98489924943933
Merged-chr5-7912200-1	4.16275693346545	1.64405974463549	0.927000900141399	1.77352551047654	0.0761416685582738	0.770473745562026	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.27857590116594
Merged-chrX-48020089-1	1.39169823071917	0	1.59847353767316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88203526-1	1.39829883026467	0	1.55395853133608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44655629-1	5.51431342476079	1.79273079690731	0.737234356531014	2.43169730361297	0.0150282607580014	0.267433175513079	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84231959469675	3.80835871315511
Merged-chr13-63701715-1	6.23980214674305	0.821266271856902	0.664826853324117	1.23530851341307	0.216715706496731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21307952544685	3.27657180668863
Merged-chr12-16637383-1	2.34353469696577	-1.59061310258891	1.30707194878468	-1.21692849736991	0.2236314219773	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.04135148958867	1.51436894928421
Merged-chr2-59019195-1	1.41774835190953	0	1.55495087094356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39084400-1	1.44406467150047	0	1.47812740187046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19086767-1	3.81455116335759	2.53172893893698	1.28430007533323	1.97129081245291	0.0486906216478401	0.57941626579574	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.10718024078827
Merged-chr11-51815482-1	2.10338691557164	0	1.44072781003489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-26962408-1	1.27022260178027	0	1.50465353841857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157048771-1	4.29144270512731	0.068524672334123	0.774027640339229	0.088530006892378	0.929455435912444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7414873742332	2.23869582718247
Merged-chr11-118276458-1	1.35788450126395	0	1.58442521069241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116336481-1	2.4234042148812	0	1.42073498514432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38186910-1	4.06187786676751	-3.45212448578029	1.22559384486408	-2.8166953516017	0.00485205254602666	0.120545120817853	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6950503635711	0
Merged-chr18-75372032-1	1.90908676330579	0	1.56804273365135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81052998-1	1.68011083337779	0	1.45548976191945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-74098605-1	1.98448819100372	0	1.73327469394745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99496019-1	1.83904896406604	0	1.45126965370364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4601347-2	4.12488404603064	0	1.37248666826737	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12219552-2	5.3126091747632	0.354688893073936	0.971966082579952	0.364919002247962	0.715171869289735	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47321675069518	2.4951856459046
Merged-chr10-122868646-1	3.65506283777537	2.68107091522415	1.30043339269331	2.06167492336645	0.0392386955627922	0.501099718599771	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	3.91620828023891
Merged-chr10-125500630-1	3.4947050153551	-0.0935368584212569	0.915308926424021	-0.102191572398066	0.918604616987681	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	1.74618975104912
Merged-chr5-25089759-1	1.99057314943067	0	1.39793622463523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7580831-1	3.13923939624275	0	1.45554075185618	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37234408-2	3.01359691163488	0	1.43083209263811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91347889-1	2.10969376464092	0	1.42179453206602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44637837-1	2.96756555454989	-0.481200005717461	1.03643714672317	-0.464282862920185	0.642445100280774	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10380936944073	0.993299420549897
Merged-chr13-46737608-1	2.16389610274853	0	1.45216789663349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-100536864-2	2.54004168038337	0	1.43391407910302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98779113-2	2.61468373011381	0	1.39468405626537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32010561-1	3.38147497535124	0	1.38516188047498	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3773795-1	2.71313326131675	0.199050613272386	1.003623166623	0.198332023305275	0.842785298328936	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.39207274064238
Merged-chr13-8785440-1	2.1917596301614	0	1.44402728373149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21129643-1	1.53065787261289	0	1.45606568166576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19932849-1	4.15232488337511	0	1.38044731321993	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-119669151-2	5.84710720396677	0.475045931967509	0.785799653416074	0.604538230453987	0.545485859807665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75966343139792	3.53249549728722
Merged-chr11-3387286-4	4.44218441310742	0	1.36686929844459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95136046-1	6.68333762212108	-0.411883708574229	0.681850513358588	-0.604067461275956	0.545798791703838	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77393743086353	3.52843338585212
Merged-chr14-31380007-1	2.37711160987176	0	1.42832571584365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104074524-1	2.04629413622739	0	1.40532883574773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191313343-1	5.88303632167101	0.566041402054977	0.856563807740041	0.660828063175377	0.508722583584853	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20833117574159	3.5322867615243
Merged-chr15-37607713-1	1.12178704258227	0	1.99019015170676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-7693038-1	2.2366131007462	0	1.4872832151465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21048067-1	2.40609823981384	0	1.43582384534907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73005270-3	3.0803485701855	0	1.41604422067687	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58462073-2	2.20465470760817	0	1.40334926923602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-31057383-1	2.46398915254488	-0.00595334664262471	1.4016436939128	-0.00424740372212959	0.996611072336243	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10459859746439	1.15786140276852
Merged-chr7-65469803-1	0.982741696095853	0	1.6175054487283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-20827680-1	1.6952839290254	0	1.53464757484614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108778334-1	1.65792080536455	-1.67278293163266	1.47138719213511	-1.13687474009156	0.255590653164437	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr4-117188867-1	1.8626146363887	0	1.47898428924083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123515155-1	4.65551224639248	-0.472444448782267	1.19690611641719	-0.394721392348196	0.693048513294301	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48783557935705	2.15509762131183
Merged-chr15-99024876-1	2.74053555055175	0	1.3931056226529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126721807-1	1.54476914550453	0	1.52190457804654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63500111-1	2.40123783409665	0	1.45495607519356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114792174-1	3.63873281135814	2.05354755311707	1.29432471797988	1.5865783327712	0.112608177953413	0.978463546254724	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	3.02817677592091
Merged-chr6-122934546-1	2.35235364392684	0	1.44679049348494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52435675-1	2.10703548672983	0	1.47863901184957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-122033545-1	1.84588409768792	0	1.46451965936525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20640218-1	2.02158728739731	0	1.52248590557453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-22653590-1	5.51073993519378	0.62894486323123	0.651352458912605	0.965598355583424	0.334245198497718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06058072325202	2.99598565830224
Merged-chr2-165901717-2	2.44807001573486	0	1.44524856973919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5792077-1	1.5736905139385	0	1.71016657453817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-5274712-1	4.78475252289895	-0.338212447104162	0.844666421550878	-0.400409485300925	0.688854939068334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92738623187092	1.75107117680423
Merged-chr11-105447944-1	2.29141446523335	0	1.41597874774393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70836000-1	2.34485505621535	2.63009664017871	1.08999415683561	2.4129456324924	0.0158241797943712	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	3.00746350286915
Merged-chr4-85560640-1	3.53852374355323	0.407112265970788	0.968762417079052	0.420239533236937	0.674310477399363	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76302217368042	2.01086664255504
Merged-chr12-112632200-1	1.70823212142943	0	1.41593286327278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113610376-1	2.2446245023178	0	1.49480814590577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117476153-1	1.14607686094625	0	1.62355736946525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41091720-2	8.57743226319286	-0.0384564249370252	0.763801802160604	-0.0503486962563345	0.959844518948785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16499380193367	3.23012142671989
Merged-chr8-24428525-1	2.48883578175495	0	1.4146757477776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-107581462-1	1.7868873472422	0	1.48527025944375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67786338-1	2.00304231165706	-0.0437800329234245	1.43734103218588	-0.0304590434302462	0.975700956821289	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	1.13759034240505
Merged-chr5-65157049-1	1.97718166793228	0	1.45332879254594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88219364-1	1.13630108902352	0	1.66428898470601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-96758336-1	2.59709071458607	-3.41330525095955	1.25358060324899	-2.72284465961986	0.00647224827143182	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48834673140933	0.303163067301871
Merged-chr15-50824099-1	2.1309563946667	0	1.43237407338646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125311574-1	5.70295577350436	-0.0719485273494304	0.839739237845643	-0.0856796063668704	0.931721114264765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	1.86774501229157
Merged-chr6-34277888-1	1.61857281505071	0	1.46560729359369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121736332-1	2.90635328808868	0	1.41771494845258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67111692-1	1.44350031956863	0	1.5003415314659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15294596-1	0.863558296452362	0	2.08455352634453	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59970758-1	1.228416787337	0	1.65217348664014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-18263659-1	1.05723869483986	0	1.66519348926759	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122712224-1	6.41734947437476	1.14418532091676	0.955591913583853	1.19735768443834	0.23116716956642	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	3.15031454387783
Merged-chr8-123028532-1	3.2000385319846	0	1.3886509595933	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-33925489-1	3.28014250718427	-3.02725757458688	1.23661491809445	-2.44801961410242	0.0143643835730861	0.259413131777205	C57BL6J_F1_Control-BALBCJ_F1_Control	3.64253033803887	0.723581231604105
Merged-chr3-61308974-1	1.97858550175922	0	1.73251186445244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54992989-1	2.90467664928561	0.386213259243758	1.1582476148056	0.33344619432571	0.73879749827484	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94792243194202	2.2188304655635
Merged-chr1-157004878-1	1.41760932887615	-0.481048266507369	1.47397593831997	-0.326361003596617	0.744151238284737	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.662147012823607
Merged-chr8-91477696-1	1.90235213687726	0.63180454437908	2.21440426922187	0.285315808482023	0.775402202571675	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	2.07434726420484
Merged-chr3-87488553-1	6.0436816086835	0.785326748237252	0.818801529143978	0.959117344417123	0.33749963370351	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	1.75680118808515
Merged-chr1-172527486-1	3.05711445946808	2.22462272147235	1.08157754865992	2.05683145349001	0.0397024413952627	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	3.30205961629707
Merged-chr3-69169954-1	1.61436879818347	0	1.59958623080099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37505391-1	2.48503154877652	0	1.44298043019022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103694526-1	2.37821619615161	0	1.47698862893365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70906236-1	2.45466142513931	-3.23789936025569	1.45954927676711	-2.21842414764345	0.026525926165519	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96491903277391	0
Merged-chr1-131974835-1	1.40045287022563	0	1.47634523087621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24380805-1	1.17060916957844	0	1.57411137626441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97463576-2	9.30412163772583	-0.913038986748107	0.546603470943941	-1.67038636833271	0.0948429449260725	0.880390649459763	C57BL6J_F1_Control-BALBCJ_F1_Control	4.02688438609257	2.53598287467403
Merged-chr1-132526083-2	6.56768943118034	0.763486545628761	0.840756486705006	0.908094742891521	0.363828167753666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17543988140679	2.80232360721511
Merged-chr9-46933398-1	1.29624271707786	0	1.7026976319093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84028944-1	1.82009546669478	0	1.51790426949425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121366744-1	2.55664781026738	0	1.41927661654598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37331375-1	1.91999093075226	0	1.49476849104812	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146481610-1	0.971373543491635	0	1.8039162842529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133206481-1	6.74513055549151	-0.0276491217108658	0.75903350726794	-0.036426747233315	0.970942087120097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01698060445131	4.15387608435486
Merged-chr19-37614349-1	2.47398272529801	-3.56677639403855	1.44241636524316	-2.47277865114714	0.0134067151477028	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18885111947556	0.376242425970964
Merged-chr8-61686528-1	1.77873525511282	0	1.47991977643909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66814991-1	3.05007212612451	0	1.41425264957567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-173961074-1	5.13842059960798	-1.71893042792885	0.691929950684801	-2.48425498307687	0.0129822812969773	0.241995150827261	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92353235484762	1.56203317187393
Merged-chr4-122897960-1	2.20464911480493	0	1.45929809549585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76144622-1	4.83818989571525	-0.0928397306363913	0.776647726234394	-0.119539049044189	0.90484830514939	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90512073759599	2.52359390920102
Merged-chr15-72980945-1	2.42586368445708	0	1.44436769730171	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54050061-1	2.2621990234872	0	1.41993866048008	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7264260-1	2.0176642919572	0	1.41521734171186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-18731210-1	2.51420079663721	0	1.39946192391121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155550646-1	2.13241001054648	0	1.45801281674946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90056263-1	3.243488088823	0	1.39153372603514	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95421236-1	2.53149709555952	0	1.40497416585612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-108140563-1	3.10522695586821	1.36125648729925	1.22796456239291	1.10854704523931	0.267625633342475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.30139522650344
Merged-chr7-84102744-2	3.98702878192382	3.6890885651828	1.10543076425086	3.33724072505152	0.000846146270976426	0.0316054515005581	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.70089346712193
Merged-chr16-44050550-1	4.3860113951613	0	1.36951397152385	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53491537-1	3.162582856379	0	1.40309324811115	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-100194357-3	3.01979923981931	0	1.38854461369948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-131812958-1	2.62995159672431	0	1.45694689036157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22186590-1	1.98567538911387	0	1.47949076567302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-75154024-2	2.68880864033762	0	1.38902748739623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91661102-1	1.44752133551796	0	1.48939177690434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92286685-1	2.30476144489598	0	1.43494175482187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54645310-2	2.56654820795426	0	1.46747191278844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57448095-2	3.77841596612719	0	1.40001523096863	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-68413995-1	2.17720565298985	0	1.45063062657446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42713366-1	1.77039611537803	0	1.42540472758758	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16728830-2	2.67866814020429	0	1.42787179635085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96300256-2	3.8094484266382	-0.0349864555905929	1.23954239475945	-0.028225299706173	0.977482459012445	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr1-30905204-1	1.10294830255459	0	1.6919201355681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-7441817-1	2.43673701107204	0	1.42806387102072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102896684-2	8.4955046279644	-0.135112570840621	0.644373404354211	-0.209680551567814	0.833917005705845	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21915892870393	2.7641464320958
Merged-chr15-78340230-2	3.36516474004291	0	1.39327311217165	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78956468-1	1.13525804583742	0	1.57437191682069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-78489752-1	2.13285969201205	0	1.46605505602564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-44202294-1	1.41046939599093	0	1.74365978102853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-23180136-1	2.44025929359678	0	1.43459932897967	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98842889-1	1.62981624044281	0	1.67564923434086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4_GL456216_random-38951-1	1.31013066713693	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-42188981-1	1.92425669281621	0	1.41428318975795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44259701-1	2.2932161505324	-2.51404960260448	1.32115140251478	-1.90292316067564	0.057050572356825	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09435135007647	0.465515277017237
Merged-chr9-121424505-1	2.84527650785352	-1.21098450430042	1.42661146400798	-0.848853759311754	0.395962671831046	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11051826775391	1.14143228603163
Merged-chr16-93744145-1	1.74673156551078	0	1.47249845176709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45081517-1	2.07945373124267	0	1.5049598473877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127932080-1	4.45858818338775	-0.187989800574193	0.984759139265738	-0.19089926975886	0.848604512300624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17061528449483	1.44660885113105
Merged-chr16-10972612-1	2.19564635501349	0	1.4326165737598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-38466620-1	1.87446319241449	0	1.4257161454258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38189081-1	3.79761020477125	0.834602306403372	0.905795697013753	0.921402374900772	0.356840389315193	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	3.0670945404623
Merged-chr1-33878850-1	2.04750858182423	0	1.5597704036432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-66457167-1	2.24290571885651	0	1.44842032596279	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134838437-2	3.17056916949727	0	1.38280473116123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102166849-1	4.30440358394578	1.66042353284739	1.33520876704329	1.24356847695381	0.213658423984287	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chrX-74095430-1	2.8069148952051	-3.63193974444116	1.25573081952677	-2.89229163445227	0.0038244276636373	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18277730432996	0
Merged-chr10-77916851-1	2.54899848234985	0	1.40167163793022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10664648-1	2.61708597036328	0	1.45970340295455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-157629970-1	1.39333373247068	0	1.57634998095136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36030279-1	1.15702950182591	0	1.49083196740258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107628893-2	10.3690750652988	0.264650452687712	0.616874284628231	0.429018455271171	0.667909794109356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.92373086661702	3.51077895938818
Merged-chr11-32625868-1	1.79957917960657	0	1.48684935941064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-117329697-1	1.67020514673042	0	1.50349398236649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93659209-1	2.28704043098641	0	1.4502156244731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41071391-1	3.16857617436667	-3.8433080837383	1.50394749452251	-2.55548022636157	0.0106041385862079	0.209221510558417	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43561848564824	0.41385117919798
Merged-chr17-8210830-1	6.08022023487751	-0.211070293429463	0.637747408964407	-0.330962212409778	0.740673028649848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56229169659444	3.50931111288531
Merged-chr7-143696385-1	1.53114614931449	0	1.505058630729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31812972-1	5.93331965116158	-1.47455759644472	0.738039523284792	-1.9979385248664	0.0457233253279582	0.555638918235439	C57BL6J_F1_Control-BALBCJ_F1_Control	4.3406717990305	2.42693421555852
Merged-chr1-155809204-1	3.06477146755544	0.821485402336086	1.32992504079647	0.617693010610668	0.536777720145992	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31193049927473	2.75642669191093
Merged-chr2-154677924-1	1.82375763927246	0	1.54344896226754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90812889-1	3.75404523528491	1.51508958571497	1.0930305694778	1.3861365162356	0.165705221898219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40646071772112	2.09523610575758
Merged-chr1-23062202-1	1.52660688819644	0	1.64174152123118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99936958-1	1.88208349972889	0	1.51658305547342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29844695-1	2.15752475037393	0	1.45181157914533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-12246605-1	2.27036353406369	1.83569766524265	1.5373758313302	1.19404613226834	0.232459922924464	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr4-132930886-2	8.76108913624447	0.488686988718037	0.612656937115523	0.797651930652815	0.425072506180924	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.47385819476835	4.20802336593798
Merged-chr5-125270794-2	3.57141003009912	0	1.38562540668827	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96349231-1	1.24786618697965	0	1.63409002958919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-70707266-1	2.78723374056821	2.8812634086482	1.14578209296842	2.51466960980653	0.011914397821364	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	3.73104359776004
Merged-chr7-84251909-1	0.806484013668955	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84193821-1	7.19317119356331	1.06118576795994	0.679169538706208	1.5624755049843	0.118176011955952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42667607911247	3.81205413176169
Merged-chr11-104565376-1	2.5181976786141	0	1.44993139930635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72970166-1	3.31941564875785	0	1.39869023095576	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-23236168-1	1.89798442189266	0	1.50260059942551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-15998327-1	2.51333989296817	0	1.44450008237422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113220780-1	1.76529008193584	0	1.53591078220919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20729582-1	2.25390093772225	0	1.45627955935225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17366281-1	1.67749143397622	0	1.50595182200355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-97699345-1	2.13757065642585	0	1.45086119471118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112353592-2	9.1690069676934	-0.533247666572702	0.58263851739871	-0.915228998167643	0.360071424314705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67582304793678	2.61410668480424
Merged-chr11-116096991-1	1.73004405164844	0	1.66265106779111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-11122822-1	4.20483859208578	-1.68978885337197	1.1724693348799	-1.44122221631073	0.149521913915726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.03816134842255	1.13180270670924
Merged-chr14-20848451-1	1.60180347738773	0	1.43820342141326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64267326-1	2.44688567190529	0	1.42037107226139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-48917934-1	4.62631595844448	-3.79797517361025	1.2108963286828	-3.13649904095558	0.00170977996035427	0.0548653653275665	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46168291124897	0.67591700901439
Merged-chr6-53376609-1	3.00874485927482	0	1.43037511601928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75559951-1	2.23964169942523	-1.20936381523556	1.37048142255407	-0.882437219018812	0.377540416068459	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22737493777144	2.06239089973625
Merged-chrX-140539299-1	4.34037127557498	-1.59928681182719	1.01108883344896	-1.58174708187787	0.113707319861797	0.984398824966051	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08364730863447	0.723581231604105
Merged-chr14-51219312-1	1.14630716969834	0	1.80230144613045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58965727-1	2.72834455220203	-2.2271712385107	1.35445907301486	-1.64432523867501	0.100109038698515	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77338891294954	1.17788344834821
Merged-chr10-99178847-1	1.60654409631398	0	1.61074836919039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-30669620-1	1.75058985058011	0	2.13792114176296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43965068-1	2.68727191839472	0	1.41347194589924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39329112-1	3.77275010417685	-0.718101204845996	1.20446165720863	-0.596200967086169	0.551040979650054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6028508856621	1.67273088548657
Merged-chr18-57707164-1	4.70326457684507	0.696793494001003	1.49417557870063	0.466339768855645	0.640972316881219	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0995156753045	2.06433119728902
Merged-chr10-18911164-1	4.9855957014107	-2.21772299160917	0.882313242852302	-2.51353247792112	0.0119528771579771	0.227581943758486	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0237869060369	0.662147012823607
Merged-chr19-11813772-1	4.11088134355167	2.70652977321899	1.19462035161628	2.26559824596756	0.0234759925829044	0.359980671597772	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.60310561942228
Merged-chr12-34847937-1	3.98940912004028	0.958060204378111	1.12699968750545	0.850098021321303	0.395270591624017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.55528346522961
Merged-chr1-105167289-1	3.33733522839518	0	1.41433353248433	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25394453-1	2.19300379865104	-2.46976643726723	1.34174981066533	-1.84070563501145	0.0656647077171748	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56104072393284	0.41385117919798
Merged-chr1-165471693-2	2.81121996528273	0	1.4362358412262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-80668772-1	3.4560497451617	-0.152687987304526	0.914096472744552	-0.167037059935352	0.867340888935792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83659484082797	3.4911355280049
Merged-chr14-34490122-3	3.73410333091657	0	1.39105400222542	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156780869-1	1.8995822813186	0	1.48496293818955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119112870-1	1.75534032557224	0	1.64633181545335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33195187-1	1.93075266201993	0	1.44453258626979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123760382-1	1.99352023270434	0	1.93986883736796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-33501290-1	2.39495914988682	0	1.42508284651317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34004009-1	2.87156472844238	2.21678928794593	1.00536485692474	2.2049599930584	0.0274569020293957	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87496859647037	4.07877857601885
Merged-chr1-60637202-1	3.14037215476163	0	1.46314736379883	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145737763-1	2.38451413274033	-0.916094151988478	1.38370750523682	-0.662057659238966	0.50793426975371	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71067116047657	1.6554464333735
Merged-chr8-72314829-1	2.63185520571498	0.613797900933182	1.47429086001572	0.416334332376337	0.677165373249861	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr17-34136486-2	7.93415802734635	0.474925392134921	0.576496061520749	0.82381376705698	0.410045383898396	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17727526033188	4.35928386079321
Merged-chr3-87365353-2	5.76380003331559	0.133306016339099	1.07918221797476	0.123525030452472	0.901691354635803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	1.46665878981685
Merged-chr2-154950694-1	4.14402461189981	-0.576142154608833	0.901961060885427	-0.638766105981618	0.522975100771467	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.90289326052054	2.15506412301072
Merged-chr1-138126507-3	2.36596167792339	0	1.4701463895922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36546674-1	2.8509749761847	0.550937381881656	1.02306433945023	0.53851684653354	0.590220277789967	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.00425570563599
Merged-chr3-20520963-1	1.81291870989046	0	1.45563523994032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-74820110-2	5.66437574034317	1.65935112860744	1.02086557953283	1.62543547541958	0.10406980206276	0.934136454810037	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.11378131411959
Merged-chr1-120510487-2	2.82730002836291	0	1.42987092029978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72831165-1	2.37482077391769	0	1.51845011971766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143731123-1	2.25803464464676	0	1.41901239371056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30214098-1	4.65136245419458	1.2473970619845	0.934533780746531	1.33478006647127	0.181948339408393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87208269895305	4.31722165992934
Merged-chr9-71834934-2	2.73194843611897	0	1.41927783310153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-88087922-1	2.50274509866837	0	1.40021836918996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84842676-2	2.42913168216406	0	1.45427750731434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-55379907-2	4.67227185554422	-0.826124707506069	0.704073336027115	-1.173350367403	0.240655331897006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29398433573242	2.54496000237019
Merged-chrX-77446920-1	2.36316789936036	0	1.40307129909157	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143748591-1	2.25978797369377	0	1.38702685061533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-6369635-1	2.53830271438822	0	1.42910827301698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44496909-1	1.78599831102673	0	1.41864354860153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66385274-2	7.08723561812078	0.289491729947697	0.598241198886713	0.483904703464793	0.628453502197822	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43894955054282	3.78785908170542
Merged-chr18-58564564-1	1.80693154638518	0	1.40607192038661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54698928-1	1.60441851537108	0	1.44038890702748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65054700-1	2.09424128199175	-1.3521580763403	1.47612586243251	-0.916018146387647	0.359657377295075	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0
Merged-chr5-114918982-1	5.47999146121928	-0.610544867027758	0.817637346907838	-0.746718419035936	0.45523354908697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.77467330795492	3.23903168378873
Merged-chr1-91095143-1	2.07448567023345	0	1.44125766059569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97441903-1	2.20135975201605	0	1.48080244144964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127603602-1	5.23178758019873	0	1.37631159603239	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-14022074-1	1.46585101568444	0	1.51305340644031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-8581958-1	1.23937886793793	0	1.72117051753368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108041914-1	1.04109142943364	0	1.80181518274624	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10334686-1	2.95564821280917	0	1.38278958562764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-134137956-1	1.27753924728994	0	1.65758145779051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96379750-1	2.48875013021031	-1.25917856393503	1.19061505443238	-1.05758663074804	0.290243940246522	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	1.02186287315087
Merged-chr1-153492764-1	2.81672968863328	0	1.42591089421172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49362976-1	2.11752236403724	0	1.45967038277778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-46295905-1	2.86074560045942	-0.106608739555633	1.84830523416024	-0.0576791850097584	0.954004174043773	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.55698213282952	1.62069611143677
Merged-chr9-66624528-1	2.43144995218339	0	1.41024750558735	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-9015603-1	1.67717076845428	0	1.4685894092951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23397788-1	1.47845403705161	0	1.48633178987987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99306020-1	0.927320284244372	0	1.62133559856956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-52066017-1	2.1584390344706	0	1.42704286729546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181208174-1	1.71926531720762	0	1.51395375252708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3903642-1	2.56506941507076	0	1.46085259905694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48578246-1	3.8275359299663	0.781580485192128	0.931729880630398	0.838848792381027	0.401554166429147	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42522159281154	3.76095456343492
Merged-chr6-120457317-1	2.41520423841935	0	1.40145072351866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27029927-2	3.32248381928342	-1.22529887408495	1.28213216660202	-0.955672828435706	0.339237554277438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr9-47735012-1	3.93968190432663	-3.30079749039399	1.15216137070004	-2.86487429134033	0.00417174815413315	0.108555317333903	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98809146232286	0.465515277017237
Merged-chrX-164004985-1	2.47025396546082	0	1.44076020393376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-29697380-1	2.77738751755754	-2.11699132105911	1.35495135740517	-1.56241130686293	0.11819112514633	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.376242425970964
Merged-chr2-84429922-1	2.319381951086	0	1.41610335037341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106890205-1	2.28782803904965	0	1.40822365576319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-75120257-1	3.67574216955774	-0.617670599272952	1.13023723956706	-0.546496414778857	0.584724751505769	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.723581231604105
Merged-chr5-125268263-1	1.83411135757093	0	1.54328576103637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-19112925-1	1.30623921212515	0	1.59354631226263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35948981-2	6.92922952070667	0.0990925556662861	0.74505044498363	0.133001136142484	0.894192481971656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59989886154962	2.5595595276028
Merged-chr19-6302688-1	2.80800290006822	0	1.43505979675298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-88467008-1	1.23323793812077	0	1.55830731638809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27756278-1	2.14954244631285	0	1.5672405093907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93391458-1	2.57631979685707	-1.92857102824397	1.42016873104362	-1.357987249041	0.174467730209459	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31742847155177	0.67591700901439
Merged-chr13-44508869-1	2.66733017973797	0	1.53733150296732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55664972-1	1.9629733707454	-0.938329245956009	2.25919345780341	-0.415338156506676	0.677894372380904	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09810261449694	1.41398715281163
Merged-chr2-17081516-1	1.01822965583235	0	1.77260884993118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-47210767-1	4.15824926678585	-0.827222100309883	1.0538519254131	-0.784950978749337	0.432482310877149	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16681072052159	1.71762629844815
Merged-chr17-73052151-1	4.30280185634745	0.984372927737301	0.979262386027766	1.00521876647409	0.314791520622726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	1.76644250848645
Merged-chr7-88034207-1	1.84957526531142	0	1.47902157852039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123422667-2	3.10487328190436	0	1.41538752010569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97672411-1	3.17745336293092	0	1.40808322445166	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28722545-1	1.53865548111759	0	1.52756555433952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59615187-1	1.82521951726871	0	1.48399444067791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26463732-1	2.45288013879029	0	1.55374358126305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59472302-1	3.51832909910741	3.27331576561306	1.33230896295365	2.45687438622069	0.0140151682511846	0.25481202927182	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.62144175773092
Merged-chr19-57573269-1	1.6063089973832	0	1.45766200562098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167242658-1	2.86285647198082	0	1.42363017711062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47439106-2	3.58919883503617	1.12157605018396	1.29697504145928	0.864763017275976	0.38716887350024	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.67591700901439
Merged-chr5-64999321-1	2.39311181988825	0	1.51500090522447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40381564-2	6.08500038470457	-2.95057295131445	1.09905206586425	-2.68465256829687	0.00726052370125586	0.160502158550861	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15271387927268	0.303163067301871
Merged-chr3-142640274-1	2.00413295482295	0	1.48040293680032	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94589119-1	2.25649129159271	-2.90026775242778	1.3218261607836	-2.19413704954096	0.0282255584558274	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15989595070923	0.879366456215217
Merged-chr6-72431369-1	2.28680142530962	0	1.46554829159188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11560420-1	4.79321526354553	0.562085387865941	0.830670031348603	0.676665061520744	0.498618488877201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5737989534754	2.37015651186143
Merged-chr16-91314297-1	2.57490176292854	0	1.40341187501011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-154997991-1	1.61364806244982	0	1.62403467532847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38691251-1	1.48416844705498	0	1.57867968195733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80717666-1	1.75023855144876	0	2.13432912741515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-55931560-1	1.77288192920723	0	1.50478273549378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-32189833-1	1.79088573247055	0	1.52268264155813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154703015-2	3.69230096747613	0	1.3902166483084	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137975667-1	1.52154169332219	0	1.58607108799614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40596571-1	1.09988703139526	0	1.55724579754503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133308323-1	2.69206950010899	1.13892183646307	1.06363303056913	1.07078456923593	0.284266306736555	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50724812564465	2.81564572866491
Merged-chr2-151876356-1	1.94227336350295	0	1.46761641408617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65147155-1	1.98571483521009	0	1.43724499130855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35055334-1	3.07155591194989	-0.534165123895513	1.27745327831893	-0.418148462226696	0.675838574250711	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.600815099743027
Merged-chr5-115569324-1	3.16728529682268	-1.74364514370165	1.46316837779364	-1.19169138027091	0.233382279142155	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72298046804482	0.723581231604105
Merged-chr9-106424160-1	2.42479198479962	-2.11757364691553	1.43022274778976	-1.48059010401561	0.13871583400692	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07125680374983	0.97908007631626
Merged-chr8-83729571-1	5.52650810998086	-0.0369502222633469	0.684773892783375	-0.0539597415333062	0.956967239087912	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.30992332074145	3.27492400699949
Merged-chr5-8868228-2	2.53875930151643	0	1.59336442657425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-13491535-1	1.39134905027949	0	1.68551537537091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-50741544-2	2.92713038988099	0	1.42185300525227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148171001-1	2.01283134875678	0	1.43849301450685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48433625-1	3.12447604572554	2.99254924701784	1.28643026310595	2.32624288532566	0.0200055970318057	0.320225043890438	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.78657487140787
Merged-chr6-29773241-1	2.67035778148905	0	1.40521107397717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-60216638-1	1.73028143631484	0	1.52866346463655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42458599-2	2.93805963041276	-2.84930445728048	1.53768990309837	-1.852977282051	0.0638856149185114	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0
Merged-chr18-42507621-1	6.16466705238714	-0.605730967731822	0.849913071303304	-0.712697554825179	0.476032929884316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.46468414995824	3.75348742805486
Merged-chr7-142038007-2	2.94241199340426	0	1.38698269662454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-80366703-1	1.99304325118859	0	1.49395480374306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-56068121-1	2.0927487636449	0	1.40937785981418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-51911941-2	3.50622484238364	0	1.38083014571476	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50262220-1	2.28166573963145	0	1.41045209826971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-21200168-2	2.74521712505548	0	1.38933468571351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-59232181-1	3.99434403608557	-0.516018989015198	0.795211649741142	-0.648907733159056	0.516398015987412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	1.45526469271556
Merged-chr8-124827588-1	5.5871693821486	-0.897420770161836	0.75910601384407	-1.18220743057659	0.237123405001342	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21265900347339	2.24979923409176
Merged-chr8-6114686-1	2.06160864344781	0	1.50252429884376	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-108967117-1	3.84875904625742	0	1.39685250709306	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-32951660-1	2.65391787888676	0	1.38277244136462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33517811-1	4.63622919599017	-0.183738887030488	0.795047715364515	-0.231104226173705	0.817233831974775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58596880210664	2.47829491766041
Merged-chr4-123565256-1	2.67348673628003	0	1.45719173609188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56422494-2	3.31837181256314	0	1.39399489778719	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99577482-2	3.31425716437591	0	1.36690925403778	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106240703-1	2.24488835724361	0	1.40629830993909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-44718689-1	3.30086842246834	2.10962423968358	1.33895663232451	1.57557324020357	0.115124187217323	0.99110887655131	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02186287315087
Merged-chr14-72532856-1	2.36813952808114	0	1.44275790093394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148940551-2	2.71112160108512	0	1.40810832930601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65846772-1	2.27878190128528	0	1.40900559628716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45635016-1	4.95361751335377	-0.545279958267027	0.831302387392406	-0.655934551057213	0.51186623620776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7542575254542	2.6681650286767
Merged-chr2-102791926-1	2.10425390930619	0	1.43778385650757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40330648-1	2.34379046367279	0	1.45968630393231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136510096-1	3.130860744155	1.20763443173643	1.07386398205122	1.12456926754326	0.260771602794701	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.37322404506095
Merged-chr17-42044868-1	4.22482226446918	0.0161156487242165	1.59402625845784	0.0101100271333094	0.991933502857608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.77114081872451	2.35378899204231
Merged-chr3-139025623-1	6.88996278533181	-0.52104633441247	0.789782350525646	-0.659734082517396	0.509424490906163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08454404619492	3.4943019016208
Merged-chr1-64879120-1	1.05159687624146	0	1.76020794531719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73506433-1	1.82436486491481	0	1.44787463805475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-154780919-1	1.82768614387823	-3.36823516979641	1.48529195964262	-2.26772598338637	0.0233459131473904	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03933265466087	0
Merged-chr17-33558841-1	2.34506348016119	-0.14838624805248	1.23201736602364	-0.120441685437763	0.904133271518939	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45327344926554	1.35339221635894
Merged-chr2-32130609-1	1.81896047785627	0	1.43751944137554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28039955-1	2.22301088799037	0	1.40319311523365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97918227-1	1.7899001928016	0	1.4986956419811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134547221-1	1.26131231695792	0	1.86311248738725	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73109981-1	2.30128519946952	0	1.50357525288246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11768283-1	1.68617103453977	0	1.46146925097809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-138000910-1	4.58585574628872	-0.657289439973986	0.891245885771418	-0.737495062212904	0.460821344894609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02820102564517	1.66382599071749
Merged-chr4-133183645-1	4.500131251925	0.523892023160612	0.823136083594302	0.636458580303014	0.52447756951056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.55172589638613	3.9214596967116
Merged-chr9-40195888-1	2.31693303712241	0	1.41864163511093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45948378-1	2.89797805545056	0.0712266475804777	1.41330273821846	0.050397303885693	0.959805784845688	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.789505890477757
Merged-chr11-118238077-1	1.98097379295091	0	1.52919627734235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90895216-1	1.37330759098931	0	1.64251965169077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57430013-1	6.47519001588271	0.147239611203026	0.848300224158969	0.173570166563382	0.862203279723966	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75520908275751	1.7421731315418
Merged-chr11-61418102-2	2.27639271429532	0	1.40340004887456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119441258-1	2.44050002048202	0	1.46088174084015	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11686776-2	2.66068630017964	0	1.49681636833956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-35447879-1	1.41815400825115	0	1.56365774375921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-77806562-1	2.9353606839473	1.52986564041662	1.34396383481225	1.13832351793182	0.25498541720649	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	1.04648494364547
Merged-chr19-29222079-1	1.42740010823434	0	1.52685820088272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-73550494-1	1.45936270945832	0	1.49112465439011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64611657-1	1.58497079425544	0	1.60123266571704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100414273-1	3.28232218047336	-0.217256730049348	1.04317984088761	-0.208263926826356	0.835022896289675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.23836617526991	2.1538399771309
Merged-chr14-31408830-1	1.14055030389905	0	1.6706419802682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-92641136-1	2.05164258575558	0	1.51355349097588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136570265-1	2.42609967478168	0	1.39025204039953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63409981-1	1.60056087580649	0	1.51509107914763	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52524978-1	2.64996136504169	0	1.39892632572772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22142576-1	2.42822723977167	0	1.4451618587359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117288839-1	1.34821950844034	-1.79241711312312	1.51429060788182	-1.18366785331274	0.236544569014017	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40343015234056	0.465515277017237
Merged-chr3-48303684-1	3.14727413671689	-0.638021593964025	1.73283981600213	-0.368194213955689	0.712728424366017	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.709466364395	1.9017620341495
Merged-chr9-64794554-1	1.56716312312237	0	1.47825518090308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-22183437-1	1.41794947428655	0	1.52525552846545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80615982-1	1.22430924826094	0	1.72057454341333	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123801728-1	2.88250182767363	0	1.42101104730278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-51972744-1	2.13702456223183	0	1.56453989833085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-85195586-1	3.17103517886413	-2.09050630452342	1.28475519509717	-1.62716314555576	0.103702452762952	0.932684952705572	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53823966306787	0.55634759613363
Merged-chr16-91480652-1	1.53402977017462	0	1.57430355824608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90865978-1	3.31656016556514	-0.0355189251225958	1.42139152856127	-0.024988839745336	0.980063865423405	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr9-37454648-1	1.30242065897344	0	1.55515977649175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-67871054-1	1.28524914173887	0	1.81745158030578	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-27106330-1	2.49939011611154	0	1.40936007907156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78436177-1	1.64919581675249	0	1.46222067676392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-97402698-1	2.16313085245509	0	1.48074013986073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102140731-1	4.03263235755515	1.41667136010454	1.07361232056534	1.31953716715784	0.186989593085607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	2.22672895781331
Merged-chr15-38074708-1	2.46939891740569	0	1.43254830380006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97489809-1	2.54006749386046	-1.35181453235808	1.39819491338411	-0.966828386670515	0.333629831258826	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr11-121677615-1	2.20355789311561	0	1.42602388137367	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58697319-1	1.61309133500252	0	1.45264591433382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30925743-1	1.40889120385954	0	1.4713555289461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-113837202-1	1.21345154340042	0	1.60950414107692	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39272453-1	2.00133816451682	0	1.43450335622936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70343863-1	1.44264935624643	0	1.52725271110046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59500272-1	3.68082805827345	-0.0330339553138088	1.38432831445468	-0.0238628040536914	0.980962043893308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr1-55521305-1	2.23629175888686	-0.687708717117097	1.44383539319192	-0.476306870132034	0.633855771638524	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr13-18791484-1	2.75003300754252	-0.491024954816631	1.18431599072597	-0.414606370818012	0.678430083647993	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	0.990919527803163
Merged-chr12-102453072-1	1.85983388908203	0	1.46739671718143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34815416-1	4.39967804691445	0.364823511777477	0.82456004095118	0.442446266686209	0.658166305269143	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6995072319729	2.00487246391424
Merged-chr7-39551154-1	1.88458501137951	2.1237641044414	2.02098275718986	1.05085711240528	0.293324220402812	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	2.07516627220713
Merged-chr2-4517796-1	2.50446524572343	0	1.40717811877931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42914479-1	1.62964008715245	0	1.46069678893245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95301191-1	1.86861284139059	0	1.41822789964516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70256709-1	2.20506976277002	0	1.58397965803065	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25522985-1	1.47090743650741	0	1.5613129552833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106962315-1	0.709789266994648	0	1.97131467378658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23981525-1	3.47928626975175	0.779055236359184	1.09072021626663	0.71425762972082	0.475067886971734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.07669635013709	2.82394743416442
Merged-chr11-26138140-1	1.33768097679561	0	1.76247665881854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9019297-1	3.73723207084572	-0.731481174784091	1.24827367947942	-0.585994230919895	0.557879391700163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94638558187799	2.27578078902551
Merged-chr11-82846245-1	2.18888127422497	0	1.43618671569038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-68787907-1	1.41101589239847	0	1.57621324154845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114700252-1	5.60373189184108	-0.436882179131241	0.655285654011696	-0.66670493464434	0.504960626147438	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44740840526047	2.42342003899653
Merged-chr1-123570879-1	3.54473409161521	-0.442423247642076	1.18331258401093	-0.373885356768918	0.708489611285041	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.41366765099209	2.87577977459916
Merged-chr2-71816846-1	5.17222988496108	0.402326383274862	0.81135191957228	0.495871610788764	0.619984996870394	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35874323081915	2.63119215907574
Merged-chr13-113636511-2	3.24687522526721	0	1.39136846852513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37203093-1	1.60487157311702	0	1.56149884244881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26818859-1	1.88219450035041	0	1.49318834273777	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130220571-1	4.48135899800505	4.33213952298437	1.20283249290915	3.60161497841377	0.000316246498602194	0.0151761355162408	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.49126797565886
Merged-chr3-103852438-1	5.02161993682579	-1.50727642448501	0.715331176266412	-2.10710293986076	0.0351086575673545	0.46929128822611	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99663435844611	2.62250565826151
Merged-chr10-118172255-1	3.17301811162857	-1.38787174454834	1.19556643209296	-1.16084870509348	0.24570343203382	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26514550294121	0.577068348605183
Merged-chr12-26187615-1	2.75790249903111	3.02470191993393	1.22702130491249	2.46507693698901	0.0136983834530475	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.22920005025432
Merged-chr4-141387537-1	1.9456204713418	0	1.42770726522386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-60026894-1	1.4875484145026	0	1.45160420462705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132816200-2	3.8006329209915	-1.22850204126806	1.28113926785953	-0.958913735678852	0.3376022045194	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.41385117919798
Merged-chr13-93852513-1	5.22063055857579	-0.0759201838107508	0.740829648351076	-0.102479947960685	0.918375728253736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07454628738135	2.12213451982121
Merged-chr8-12677733-3	3.51564865366203	0	1.38296228859108	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-89646892-1	2.62759683874978	0	1.40740428129937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-33672973-1	6.30030106507471	2.35158450112032	0.735695289113138	3.19641098144735	0.00139148756025961	0.0466049736833961	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5105912313833	4.04903455283172
Merged-chr5-64643227-2	5.10693116694754	-2.3171104896156	0.875144067251944	-2.64769033616556	0.00810437233497836	0.174308368831057	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83144630749374	1.56533893459231
Merged-chr12-56030726-1	1.40905887713844	0	1.52690184044084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116418719-2	3.94745683283668	0.797083293808833	1.07343096365033	0.742556643883512	0.457750145859728	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.12114437764854	2.62552408813723
Merged-chr4-6344577-2	4.86289070427989	-1.29615457394164	1.40556125701404	-0.922161568891834	0.356444305844222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.727201944460961	0
Merged-chr18-79246392-1	1.60191643897951	0	1.47054551833654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165844746-2	3.39418724534775	0	1.38176997037241	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-4568759-2	2.02376428674251	0	1.41820267997783	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25116563-1	2.52108756027063	0	1.39548570830931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136128089-1	2.76398250079412	0	1.47966759176965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-15542036-1	1.48516335940879	0	1.47780361731808	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89019532-1	1.4546934280891	0	1.52258980516819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64246750-1	2.11356869584257	0	1.47462840009486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-5047512-3	3.29068560742484	-0.03638755938371	1.19605489437792	-0.0304229843920629	0.975729714443842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr14-70798372-1	4.45832434350409	-0.457692734093482	1.03246070390259	-0.443302812749632	0.657546721575197	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0.730937814817307
Merged-chr14-102884501-2	3.33855287136402	0	1.40024721879682	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65881355-2	2.4474838461223	0	1.44358365178426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49058691-2	2.73930734494548	0	1.40023380165194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44435906-2	5.51467261094508	-0.0350853543158598	1.1527523679717	-0.0304361589623916	0.975719207523196	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr9-106319289-2	4.87740380188892	2.81875132907187	1.13241896077635	2.48914176352136	0.0128051894734289	0.239531071777744	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.92048898258984
Merged-chr7-139224179-1	2.64972423831394	1.84783744936627	1.44693799184604	1.27706747613196	0.201578426083791	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr2-160864257-1	1.74254419189261	0	1.44131786668574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7239621-1	2.56158087935629	0	1.57989863691135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181538396-1	1.16460249616459	0	1.65378357400206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33295338-1	2.04679758236724	0	1.47231109917959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-93203914-1	2.23590529144505	0	1.49492435859329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85837971-1	1.59440475954427	0	1.56038048720191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36462024-1	1.66074434874245	0	1.46909461304338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166592722-1	2.14533974238213	0	1.4616941002553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11490805-1	2.80273668915711	0	1.47781716806519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-61572498-1	3.12187828116444	2.77922529629238	1.03246783412724	2.69182748791559	0.00710616924579087	0.158118810491996	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57597341069752	4.10813676507362
Merged-chr2-84832619-1	2.10593169269676	2.65449478488566	2.1275604376279	1.24767068325695	0.212151681663814	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	3.63187924491172
Merged-chr17-34299669-1	3.48155062661599	1.41807091216335	0.871924932965758	1.62636811788366	0.103871368906908	0.933279957423244	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47321675069518	3.97665021424582
Merged-chr3-122251172-1	1.31916681755803	0	1.54901849715009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99689955-1	2.43979746537009	0.228704085322867	1.16284366009528	0.196676555216484	0.84408065796446	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.18909650862134
Merged-chr8-30885090-1	1.55665621703597	1.17840450337377	1.51052559515722	0.780128789046513	0.435315072450797	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chrX-101444692-1	0.972536069684825	0	1.96188344432856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-36645304-1	3.40008317296096	0	1.40024591469912	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76608652-1	2.17374425437086	0	1.49002158783067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-58035651-1	2.57071387320309	0	1.39809274542103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94047266-1	5.08621181104493	0.624436853059565	0.769392301279763	0.811597480272304	0.417022637602336	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19127296633573	2.92656614174512
Merged-chr4-66858393-1	1.72669847040699	0	1.49589655388732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121260760-1	2.32239489651351	0	1.42153750302731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91165294-1	3.31700669077059	0.827570916258439	1.17680790770852	0.703233646576935	0.481910154062252	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37816961274976	2.59003689567729
Merged-chr8-119380810-1	1.63879322105557	0	1.44732016219919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93123350-1	5.37284221997739	0.828138702024952	0.646456046929935	1.28104409566256	0.20017817816066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.45916162824808	3.18347492960484
Merged-chr13-112326496-1	3.89748925340469	-1.22088840397252	1.04464149640412	-1.16871520820786	0.242518392515942	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26323214702659	2.35592701975932
Merged-chr8-89222655-1	1.59969564711496	1.09361473106414	2.15449345613924	0.507597146766853	0.611735892006704	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.723581231604105
Merged-chr10-10397025-1	1.80145059589846	0	1.44484649260228	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-39561155-1	1.13305849091644	0	1.86496707933684	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-120572616-1	2.62037680912636	0	1.45469999568239	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-67261165-2	2.99861188725283	-0.0393632815163397	1.18313472381216	-0.0332703290031991	0.973459014680696	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.898163539755574	0.887876939341704
Merged-chr5-36579197-1	1.6895348648611	0	1.45801008285923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103327147-1	2.06625569457165	0	1.4744871895114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70286594-1	1.43792891132967	1.85552998026483	2.4196760417513	0.76685058175054	0.443170358535035	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.83878779687608
Merged-chr3-152274102-1	1.03435506969122	0	1.73203093188752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114383259-1	1.5058889467159	0	1.5445929267766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111981213-1	1.58311985390374	0	1.46748855195118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111588447-1	1.81716890445893	-2.80564207438823	1.47134688669761	-1.90685289767758	0.0565396391255114	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	0
Merged-chr10-21997859-1	2.16635769093404	0	1.41690402862471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-11766404-1	1.34802443745218	0	1.77167591744675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122631890-1	2.2145180426142	0	1.4751700955368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-51922491-1	1.80665587334967	0	1.51168510295512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-113217478-1	3.91585361685838	-1.79509591889626	0.891276964987701	-2.0140719320857	0.0440019818808994	0.541522239769937	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13178612559225	1.18909650862134
Merged-chr16-23958758-2	2.29670909383398	0	1.50157613872003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47572491-1	3.25184411637627	0.500975319924029	1.04553501916592	0.47915690124247	0.631827012348515	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00182956598795	2.19776446004195
Merged-chr2-21111630-1	2.53698929275057	0	1.40570654115662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106221061-2	1.86569873675226	0	1.53829604507753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125095244-1	3.73133737306695	-0.806764502309773	1.37985502107067	-0.584673382341124	0.558767355022721	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46486482462982	1.30139522650344
Merged-chr3-65002786-2	2.57499118866651	0	1.40806093490989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-10589542-1	1.16378033356039	0	1.68484039466318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-48598215-1	1.53259450121973	0	1.55099404735733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121307309-1	2.45843968392492	0	1.50630462416412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-113629840-1	2.25660502670928	0	1.46388447929233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-51850699-1	3.6581948978142	0	1.49506968917619	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115799474-1	1.78396135965781	0	1.44944937103147	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104546693-1	2.50167384702822	0	1.40168319377234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58631121-1	1.57202280709907	0	1.53296577049199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146800664-1	1.77141609162476	0	1.50445651398792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135054610-1	1.58491313345339	0	1.56739347458693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192752880-1	1.98030386727508	0	1.43998138095313	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-84806669-1	2.71019733732955	0	1.41115593915853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58121283-1	2.39669350404862	-1.32250026093983	1.24166845142955	-1.06509935032755	0.286830973246647	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82361065065357	0.67591700901439
Merged-chr5-115051027-1	5.94652339034357	2.06669772816709	0.855468399391799	2.41586682761914	0.0156978015001407	0.274643318875491	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9027682814719	3.38326844133363
Merged-chr2-12881195-1	1.55939181198929	0	1.45619829430353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119464102-1	2.96925024354752	2.66962638085555	1.28541884381521	2.07685331026572	0.0378151001403756	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.30139522650344
Merged-chr15-62392031-1	1.9067832098593	0	1.41735664149586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125403685-1	2.26931159676463	0	1.40947012763617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-87348242-1	1.18411036035091	0	1.97094436819913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29840000-1	1.95399160219984	0	1.48222196013997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53579110-1	2.96656307245764	0	1.37478824879324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60581674-1	1.97334425696816	-2.22705653170579	1.56916132585899	-1.41926549871261	0.15582162666805	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	0.303163067301871
Merged-chr16-90676786-1	1.84250453582485	0	1.47138621045334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-17051154-1	3.06335581534276	-1.19582991632945	1.30922977217728	-0.913384297960747	0.361040460888016	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.41385117919798
Merged-chr10-53443624-1	2.17300690252467	0	1.4750731405068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124167575-1	3.03377730364521	0.983011037252581	0.974962041773161	1.00825570138585	0.313331723487572	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63379099656069	3.02841638277386
Merged-chr10-98518578-1	1.1440725456417	0	1.86553258843574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123500670-1	1.39709075654831	0	1.66674832818047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104934204-1	2.45763235404718	2.12506113240794	2.19670714826843	0.96738481234653	0.333351699580447	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	3.09807387464709
Merged-chr13-54838703-1	2.1939255631236	0	1.40363190444795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113815978-1	3.74792115145238	0	1.37535731526343	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-23886836-1	1.14117170117832	0	1.66730627065304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92741054-2	5.61397048639326	0.0699156354740632	0.74535142261443	0.0938022432811944	0.92526624966373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15271387927268	2.21213269525289
Merged-chr4-141978707-1	2.95361945518395	0	1.40106795193267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-16170290-1	1.56959284168017	0	1.44327936394016	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-63130548-1	1.23430140304253	0	1.49283162471558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70950027-1	4.50911236829469	0.900029060714141	1.00651561172795	0.894202782576821	0.371213403723415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47834507100322	2.73164185663168
Merged-chr13-37801924-1	3.75750614880975	1.96511370592031	1.22363889612448	1.60595884304123	0.108282953188821	0.957876818940786	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.25298535761957
Merged-chr12-86798985-2	2.86605245666975	0	1.3874247970567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61770519-1	2.01694073727483	-0.973711456767225	1.54450646986129	-0.630435336962151	0.528409797142448	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.679405493272835
Merged-chr1-74763277-3	3.8477057072739	0	1.37153917239379	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57919372-1	3.29018508466678	0	1.44073117048198	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156460413-2	5.06465434927089	-1.16096339440531	0.917845912370315	-1.26487831863536	0.205914950626572	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60073253909927	1.44501253210894
Merged-chr1-120236557-1	2.08545327217024	1.78354025835624	1.46013539409751	1.22148964100595	0.221900685406604	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr12-16868871-2	6.43049234317081	-1.1196417684352	0.85550452129397	-1.3087502643957	0.190618959203957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65843931279771	1.60650301571838
Merged-chr8-84704563-2	6.38192241632734	0.00995792721826211	0.644672482275403	0.0154464902598528	0.987675973978257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30406722002565	2.85476293333406
Merged-chr3-109354038-2	3.21381696881599	-1.37420899471336	1.10435701948447	-1.24435211663241	0.2133699977482	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85144754364776	0.577068348605183
Merged-chr8-122893639-1	2.59515266583597	-1.59669085960304	1.32359147070749	-1.20633208579802	0.227689470782327	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	0.679405493272835
Merged-chr14-26436494-1	2.2136481131976	0	1.45196071353596	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146769791-1	2.68554593611087	0	1.40445824984091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23311200-2	1.81755965177805	0	1.50350841887323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-103087138-2	1.6325159825572	0	1.68425090511259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157079561-1	5.48659803323791	1.83225404553226	0.923282691250897	1.98449950691684	0.0472001830025369	0.567393796513689	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	2.50072513364383
Merged-chr1-189887687-1	2.00907004235491	0	1.45916571558307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13971827-1	2.37079585004395	-3.22581415356523	1.37143983480924	-2.35213683581965	0.0186659069057784	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58148496924487	0
Merged-chr19-55585716-1	2.1920619957019	0	1.43790320790338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-120698755-1	2.62917539607522	-1.35308944544718	1.40222166156782	-0.964961163083366	0.334564264487887	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr13-108153145-1	2.0886012594125	0.0165894568828157	1.25621451496579	0.013205910841802	0.989463513882525	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.723581231604105
Merged-chr3-65434800-1	0.942581044655061	0	1.8613176171602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-126424482-1	4.3673216112265	-0.262039688399482	0.88108300021023	-0.297406360509689	0.766156288275843	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09093093088911	1.84252025419888
Merged-chr12-102464185-1	5.0146905205181	-0.667230558686546	0.724022683935815	-0.921560295679487	0.356757976724222	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.92015843729593	2.64481586048809
Merged-chr4-62600712-1	2.38319361146669	0	1.4510371799691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129064707-1	1.41039700756799	0	1.62923544956944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75377634-1	2.23977972722663	0	1.40110317137056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40133088-1	6.37214238900647	-0.123341680520081	0.702223859489544	-0.175644388685026	0.860573327302486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73679482161042	3.5082941187229
Merged-chr2-61489896-2	2.60811482848972	0	1.40630186176085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-143661017-1	0.890018988549689	0	1.7656626999002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-56165770-1	7.00296704241537	0.887708488909891	0.648243491884839	1.3694059408584	0.170872418255087	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66067886431113	3.89090048594245
Merged-chr4-138983514-1	3.30412809505118	-1.45839266442979	1.25686294494611	-1.16034343306408	0.245909007662621	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8196274363787	1.25115482808927
Merged-chr4-3682086-1	4.83123937010079	0	1.36527428879886	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67723418-1	3.55035791833409	0.464486535661752	0.980946334904215	0.473508610139318	0.635850359626505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56586581096048	1.88203347568932
Merged-chr15-79261537-1	1.88888707399058	0	1.4917604372052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37233897-1	2.71438107906274	0	1.39897142057949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91060746-1	2.18169185448569	-0.0373502805051453	1.3123154655293	-0.0284613581766186	0.977294187242583	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr12-79617522-1	3.9856675295744	0	1.38919738232317	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-69813445-1	2.19329920685386	0	1.45614756732701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64222406-1	2.39666403611939	0	1.52046126261767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52576962-1	1.8782465526926	0	1.4537963655281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-34378004-1	1.7917142948642	0	1.48604829145861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45583786-1	2.03311548516578	-0.0355486035481711	1.4178554214272	-0.0250720933960871	0.979997459426602	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr14-121439443-1	2.73801924008684	0	1.42061224043987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166171856-1	1.2846636737313	0	1.64892256544616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-90454631-1	3.93570852270355	0.356800379653806	1.32785704619981	0.268703909562353	0.78815754300654	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80720362046621	2.68384284517824
Merged-chr1-131438351-1	1.82351692831189	0	1.43744724491274	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-139584023-1	4.31725707360187	0.0443788471009187	1.21274746509069	0.0365936424345362	0.970809012739186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41465620705893	2.51015610301198
Merged-chr19-59209325-1	1.54855290904118	1.7873629434892	1.54947441828619	1.15352852708994	0.248693515502397	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.51301315377886
Merged-chr17-66665525-1	2.65678624222491	1.50241772994226	1.43303475369997	1.04841681338373	0.294446610444323	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	2.45854175169569
Merged-chr6-113981142-1	1.70549597716145	0	1.55793166192205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79442213-1	1.24721657500316	0	1.6229980186383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95045358-1	2.26306840729604	0	1.42188234189768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54247782-1	1.42395042828476	0	1.5320328667817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-29973377-1	2.47314763483901	0	1.51264801134293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-14758963-1	1.86502312401531	-0.8240665759418	1.68538542412226	-0.488948441197637	0.624878199461913	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	0.577068348605183
Merged-chr6-53586658-1	1.76362490467265	0	1.5000686235069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150874638-1	1.49465536445299	0	1.45668577472371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109370173-1	3.23744729707143	0	1.38045295521332	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154587918-1	1.48711030970498	0.914444398907819	1.58960517528084	0.575265111820148	0.565112012909052	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0.577068348605183
Merged-chr4-32056444-1	5.86056142812383	-0.00147345305911226	1.02545783500389	-0.00143687337383957	0.998853541313682	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41455337443306	3.79849602452761
Merged-chr6-124321977-1	1.65382899738074	0	1.5515306871793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24432005-1	1.58366160445643	0	1.47001001845645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163941662-1	1.40676504376418	0.782680161792837	1.66180612024453	0.470981633933126	0.637653850436163	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.23107802440432
Merged-chr7-116161664-3	8.48511183657239	-0.265287085465592	0.5392711731734	-0.491936336786707	0.622764349693938	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.85066574771813	3.81396691080378
Merged-chr15-66084044-1	1.96645224503795	0	1.50218051354585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-66166368-1	2.84886115299467	0.415527687300053	1.25911814522241	0.330014851169232	0.741388740582625	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11916498288763	1.1851593103483
Merged-chr1-34005319-1	1.4640999482132	0	1.48737219992009	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13823919-1	1.9253606942109	0	1.46203846499528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132384834-1	2.21943429587672	0	1.52109899798138	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41156274-1	3.39684946889466	-1.30002253809194	1.07643663301652	-1.20770930514402	0.227159097543699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90896656829731	0.990919527803163
Merged-chr6-97518864-1	4.65224639930252	1.1643116621518	0.747346216306925	1.55792808841041	0.119250295904931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	3.32053763889986
Merged-chr17-5627959-1	1.08261705060672	0	1.52599954515917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-31142804-1	3.80132949933754	-1.67295260518136	1.15610327594772	-1.44706155581987	0.147879684056164	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	0.71701424649985
Merged-chr1-87174455-1	3.00627128530895	0	1.40249982277464	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52422882-1	1.00524259054974	0	1.6169715091722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49380344-1	1.97394003944546	0	1.46609934390508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67129019-1	2.06856324349275	1.98326954895522	1.40907704266552	1.40749546611271	0.15928052073072	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.30139522650344
Merged-chr3-121844812-1	2.8612044404096	0	1.38154747732114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16579230-1	2.82855522536165	-3.07871908893431	1.2295324941268	-2.50397537571448	0.0122806580933357	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08307023099066	0.303163067301871
Merged-chr8-84921677-2	5.15342117453317	-2.046644335634	1.12314381532022	-1.82224600956421	0.0684176662637546	0.722579351162121	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	0.465515277017237
Merged-chr1-163900336-1	2.79319307814647	0	1.45487952812918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124033915-1	2.10098872491987	0	1.50516298821242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76189978-1	1.28388588724748	0	1.51897190335482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96637932-1	4.09474525505486	0	1.38593583986297	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49064919-1	1.75984255739992	0	1.45574245003258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46607480-1	2.63414681032141	0	1.38473577592292	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75517877-1	2.37822307804601	0	1.4058771445462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-120845224-1	2.66323107136859	0	1.47134220839789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148705873-1	2.05740316184788	0	1.45710341029281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167225971-1	1.4269615598714	0	1.57825956710469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64217640-1	1.57961150458888	0	1.44572017363469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88618119-1	2.34916563093036	-1.03555881648477	1.2018107505232	-0.861665462747728	0.388871636237823	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19206322264949	2.36990182961208
Merged-chr8-70647534-1	1.69140501363226	0	1.58315068476108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24190554-1	1.79295368680817	-0.317338715309454	1.70742657482023	-0.185857898658316	0.852556198877657	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.97019877533161
Merged-chr2-29817754-1	2.46910174083207	0	1.43526821642332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55257772-1	1.80314290712684	0	1.52918420425025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153443229-1	1.95588084027689	0	1.48711259453636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78358334-1	5.65363667845313	-1.35049086945943	0.953818080103535	-1.41587887421136	0.156810971224662	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	1.09982365757507
Merged-chr18-69084307-1	2.34896956822219	-0.717817908657684	1.38460022737041	-0.518429720339523	0.604158483013476	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.465515277017237
Merged-chr16-22070769-2	2.88511124950413	0	1.41018853636512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87451259-1	1.95875152570803	0	1.41968081846797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121219185-1	1.8603160073882	0	1.4315335304072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166957058-1	1.93487309021199	0	1.49637222336068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28151956-1	2.07761908974611	0	1.41866268008876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90212336-1	1.70084839208591	0	1.47634527811909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155611487-1	1.66408625977194	0	1.59172450474748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106101207-1	1.83445133445553	0	1.46936901476165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65571182-1	2.65742621337874	-0.302374546465511	1.14824603804326	-0.263336024203306	0.79229159593099	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50282389800248	1.02748994520012
Merged-chr14-54701512-3	4.10165715393247	-0.237139225653582	0.922503707175477	-0.257060458195506	0.797132101813957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.49176722630688	1.38572824442771
Merged-chr10-8750645-3	6.00362945838556	-0.833918058566899	0.847252604921394	-0.984261427728826	0.324986989642888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62306943957144	1.25298535761957
Merged-chr17-31557526-1	2.0358993409143	0	1.4874150727378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85385043-1	2.16392090912424	0	1.47418842161969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75416496-2	2.18199500932889	0	1.501525249325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77459523-1	2.48135524088385	0	1.5074948252818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-135954390-1	3.20620712711236	0	1.39456339443123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-50394599-1	2.09905110303841	1.37634270586669	1.50373822175099	0.915280788875633	0.360044241807797	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.990919527803163
Merged-chr14-37033430-2	2.92561371974221	0	1.39698472622896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-94952441-2	9.56336845939799	0.0737348683476327	0.554569646368154	0.132958716421857	0.894226030069986	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.01197873737529	4.15495290836709
Merged-chr17-57167226-1	3.00813134080176	0	1.37596442838063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156425657-2	5.09868851715078	0.215442401881189	0.967473059753298	0.222685685879591	0.823780142663535	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08137696679909	2.54428723463378
Merged-chr13-56152036-1	2.7074272753972	0	1.39343826069372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-106307790-2	2.35602874536452	0	1.44980814479581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55469373-1	2.78015133109933	0	1.40866652954595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99902204-1	2.28283670885222	0	1.43586944555818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54902020-1	3.00929479618519	0	1.39615408901494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25517362-1	2.17859854852111	0	1.47305179831355	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-109244731-1	3.3709766375391	0	1.37687836445923	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-4544758-1	2.62844816979797	0	1.3973786066864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-99027613-3	6.42762861799764	-4.44792780238034	1.11558838910243	-3.98706892777812	6.68945959228872e-05	0.00417488328332058	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17114368603383	0
Merged-chr5-64265361-1	3.07856395582801	0	1.40753822261004	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-51869902-1	2.01783620992419	1.21617821590761	1.43225616327826	0.849134566210511	0.395806418228865	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.38647389072186
Merged-chr19-36818349-1	0.87435928619048	0	1.80365870999824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38284143-1	1.81023167236306	0	1.4403200781779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33670767-1	3.82927923060907	0.846743857857725	1.13616809884597	0.745262834538111	0.456112844057255	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94767211644437	2.23663265814665
Merged-chr13-112757056-1	1.55638194677908	0	1.6582567299193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64942380-1	1.88890395231268	0	1.47568453976711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-43384936-1	2.4839079326601	0	1.44496545138531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-57926553-2	2.55561501648828	0	1.38661038960986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99096835-1	2.09021479612793	0	1.47843171323013	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-142319535-1	2.94414926052305	0	1.40038795266457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131820261-1	1.45404969177632	0	1.61137316639459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104952719-1	2.65848567460146	-2.65306578138815	1.45733049721754	-1.82049698846871	0.0686833544556883	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0
Merged-chr8-35871640-1	2.31712921482831	3.98457064642719	1.96175238262714	2.03112823091931	0.042241988344036	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	3.73659064390272
Merged-chr4-150155980-1	2.08244767396691	0	1.45398633212312	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-101978279-1	3.91687908155423	1.10043600540468	1.22067083446757	0.901501022496916	0.367321990415372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.14143228603163
Merged-chr14-26438412-1	1.68883075117773	0	1.50641810367569	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-24994181-1	0.84741999727175	0	1.97995450171507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-161991488-1	2.89598043038434	-1.68935830552551	1.26931891809193	-1.33091714103261	0.183216276461306	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95710352170887	1.71968126597395
Merged-chr16-93615637-1	3.25077337377634	0.527174805702931	1.25666095705533	0.419504403907186	0.674847536871046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.67591700901439
Merged-chr3-136314552-1	3.87995922047419	-0.48896062111424	1.00716062405498	-0.485484250908868	0.627332881666254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.59184561974686
Merged-chr18-4255692-1	1.74129709784811	0	1.45633683701761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-54496250-1	1.98352151510983	0	1.5331942389619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-17742130-1	2.23334900020883	0	1.42848252066421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83256920-1	3.80399887487749	-1.68194886303093	1.03934901218169	-1.61827147889463	0.105604104412339	0.943468953980045	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17283015146628	1.60575736942423
Merged-chr16-33166492-1	1.94773883348219	0	1.44882164385766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43377072-1	0.976121281651962	0	1.60635568805716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-71396616-1	1.99468665867605	-1.30137654841709	2.03576258110027	-0.6392575246735	0.522655415466889	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50201473284981	0.887876939341704
Merged-chr6-97800118-1	0.792614090545201	0	1.75647767025524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28803400-1	2.22853504825951	0	1.49496581557635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105260948-1	4.74857655037123	0.418729590775613	1.00323604634592	0.417378933203954	0.67640126154279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.67692428396529
Merged-chr9-119923500-1	2.33975925934493	0	1.42307349658083	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105926562-1	2.11174576741529	2.05424614845338	1.31533502297727	1.56176647969396	0.118343011131658	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.85586742064097
Merged-chr5-92028900-1	1.66568620783563	-0.603898138684429	1.35711300876019	-0.444987362722379	0.656328886720759	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.02748994520012
Merged-chr11-86117710-1	2.22756141291018	0	1.49404263989746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134418295-1	3.9274243832742	0.551873906071647	1.23687108396086	0.446185470117361	0.655463277645793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82708162815316	3.16975338112913
Merged-chr7-80773126-1	2.16287214928321	0	1.4661391362344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-93860608-1	3.54804558032528	-1.86971626652917	1.03341334519693	-1.80926274585013	0.0704101937398051	0.73434914073332	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21017871366514	0.837303648891292
Merged-chr10-106999555-1	2.56073739815732	-1.43954842305827	1.97948996245143	-0.727231989231969	0.467083852941424	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11954826727022	0.897114879832661
Merged-chr11-31803955-1	3.69067752979249	-0.926002075921599	1.0384731518262	-0.891695730691919	0.372556042510717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06806339973931	1.37135198817083
Merged-chr6-97828751-1	2.96453861061132	0.226339216672597	1.11677870719249	0.202671500821858	0.839391799917791	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	1.07599819202159
Merged-chr11-3104629-1	2.00852037978424	0	1.49022765326572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-31120611-1	6.22127335769814	0.767341995581738	0.613647976295257	1.25045958794547	0.211131708918765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.01206875777999	3.58853068676215
Merged-chr3-87816749-1	3.16884389808678	0	1.38478432371716	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-145156146-1	2.5579119300628	0	1.40420844620358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42025153-1	3.06257526141754	1.24475109900786	1.71496526122184	0.725817092132249	0.467950907359061	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56104072393284	3.10768705778115
Merged-chr1-191416821-1	3.30926215429343	-1.89929341655389	1.3410338088598	-1.41629047978197	0.156690474052374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr14-120741343-1	1.55101059727619	0	1.50854144287346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82051797-1	2.52876861445419	-3.32308149161252	1.58544674515143	-2.09599061070647	0.0360830238632555	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	0
Merged-chr16-78261681-1	1.78513871405841	0	1.5570217775479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115471336-1	4.14918590522995	1.77889863680651	1.23436598494265	1.44114359801413	0.14954411872757	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	1.92503739729973
Merged-chr3-116047229-2	2.91630999883262	0	1.52598005413441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104176637-1	3.61607589109972	0.0817544580470079	1.13171583109862	0.0722393871327613	0.942411400638531	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56668112102066	2.57202516804505
Merged-chr1-44070902-1	2.3364547210999	0	1.43717991051397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115495499-1	5.62372740838151	-0.273459146851064	0.87157391986756	-0.31375324641726	0.753708456420349	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.80236619434955	3.04001829306231
Merged-chr9-63738786-1	2.7252257646628	0	1.42422034306053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93689570-1	3.87864358632745	-1.18552809564753	0.842626798101041	-1.40694326161862	0.159444213928208	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53015689313859	2.15203663810895
Merged-chr1-33863394-1	2.05353477274379	0	1.42603840379857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-140204043-1	1.25075084543912	0	1.52274097153441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5532901-1	0.761882131613478	0	1.84202916536933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66880791-1	2.21643274185663	0	1.43372198560781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45748614-2	7.55645815745014	-0.242028227720877	0.593228642823175	-0.407984730084956	0.683284885553192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08686462146428	2.91529699008247
Merged-chr4-3688052-1	4.94633136129726	1.55788400097904	0.936108756331176	1.66421261465894	0.096069948041533	0.887536761656984	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69181239031707	2.07434726420484
Merged-chrX-81174547-1	1.61858827180957	-2.32311494570581	1.54948511697493	-1.4992818712846	0.133800523356949	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11539020246932	0.601513806634888
Merged-chr3-125895860-1	4.69309336224289	0.401395555190577	0.77539437320461	0.517666324468745	0.604691097825692	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70725431807534	4.0888890899446
Merged-chr4-136907218-2	5.9606058562045	-0.191234335813639	0.712458724908794	-0.268414617054651	0.788380189419015	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41316001406225	2.34502298933502
Merged-chr7-132466098-1	1.40958191457075	0	1.59380939362901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65671663-1	3.53972609079041	-1.38224842531038	0.876641736110962	-1.57675406996071	0.114852123728418	0.990205645321662	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08292340562346	1.82000841559213
Merged-chr10-117832892-1	1.53849649224137	0	1.47608015167546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44468086-1	7.0341341399679	0.0473206140839679	0.708321949324822	0.0668066465102123	0.946735632083066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48718831954708	2.92542389968754
Merged-chr13-49102369-1	1.90310227074203	0	1.46426584549179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99492969-1	2.35789835401056	0	1.46107868123683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75067097-1	1.59230818329132	0	1.47464098618037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-53005425-1	1.52518686839693	0	1.52614716564218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70202415-1	2.56303362765792	1.35849713491782	1.62658937912858	0.835181363132721	0.403615601339381	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.28067447403188
Merged-chr17-48602710-1	3.00401292263397	1.59868251635691	1.20164810901694	1.33040821548397	0.183383809203844	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.09629562434733
Merged-chr6-136655335-2	10.5864834375703	0.741141659946937	0.493898984198573	1.50059361055288	0.133460704961135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.23529528336796	5.02479886591363
Merged-chr2-146983090-1	2.38402256199659	0.605228984713295	1.55294080958888	0.389730877684592	0.696735561310334	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr4-74310188-1	1.70783039505608	0	1.54310145866478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-148731603-1	1.5006997122032	0	1.48814068618648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-51195974-1	3.29414688351853	0	1.38360254532133	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136853729-1	1.36316753069723	0	1.86418409887891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124901967-1	1.7810114825034	0	1.45820003266036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-96654801-1	3.7238882972335	-0.295741305012846	0.940165288025616	-0.314563097339953	0.753093401768339	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9896207871548	3.22463750950474
Merged-chr4-116644534-1	1.60228332769958	0	1.44768143042235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54009430-1	2.24196683492465	1.17599445603557	1.45637099534602	0.807482749789428	0.41938840899973	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr2-103670522-1	3.07190271067052	-0.035231601910152	1.37951043359941	-0.0255392065562172	0.979624876367084	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.601513806634888
Merged-chr11-109875992-1	2.2265500540365	0	1.39627317783305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165154401-1	2.31054852752355	0	1.40570889114793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-101159545-1	2.31825451185993	0	1.44977496523866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94625049-2	3.70424306102931	0	1.44907681409859	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134394818-1	2.00288577221235	0	1.4155964641385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-88383881-2	2.03837391108993	0	1.49167066843191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118892102-2	2.49271420635444	0	1.42047034084119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43383215-2	2.38282195924286	0	1.47657347592551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35842549-2	3.33253671054592	-0.363713510467617	1.42327085710473	-0.255547641302442	0.798300152267916	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.55634759613363
Merged-chr2-143838025-1	2.40255474463467	0	1.43090603091509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-78846681-2	5.22111049151688	1.15996728235138	0.967960269514323	1.1983624936728	0.230775927190502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.8754439179929
Merged-chr2-83903344-1	2.11742939076539	1.44281387019491	1.48728752427944	0.970097473851888	0.331997908065406	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.838451940269823
Merged-chr8-123835707-2	6.33857670731812	-0.334545424286108	0.668101432463423	-0.500740468483314	0.616553787448201	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72414390112353	3.42070878903369
Merged-chr15-53399305-2	3.12777509027509	0	1.38984660077209	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-108204133-2	4.9735380909718	-0.532470387884233	1.13842502175289	-0.46772547836691	0.63998091853348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	0.577068348605183
Merged-chr5-105743280-1	4.99513644383293	-0.36254951379935	0.924348043510393	-0.392221865286259	0.694894289699407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43569701981196	1.73795749839718
Merged-chr7-129772008-1	1.54665276343245	0	1.51356152469029	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39587056-1	2.0514288952176	0	1.43184926684674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70613577-1	3.1469004450432	0	1.38605011645267	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-105846959-1	1.25602766781972	0	1.61822234635929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70003950-1	6.28627120798816	0.515129561100506	0.658698959573304	0.782040951505677	0.434190507129561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78894736311116	4.12691577608471
Merged-chr12-100764919-1	2.16054574670607	0	1.40858592875642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-15097035-1	2.00990571662653	-0.371817070821638	1.27059667405577	-0.292631862190218	0.769803556831733	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0.723581231604105
Merged-chr4-148709658-1	2.93292579502337	-1.37294808799706	1.07284792393131	-1.27972292938413	0.200642597500635	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88903407179563	0.67591700901439
Merged-chr10-19204145-1	1.46632486770657	0	1.59579637892021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-124866191-1	1.76623438799945	-0.150655633106246	1.57118650907478	-0.0958865368535799	0.923610687342186	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	0.88866493597531
Merged-chr1-60447301-1	2.05704996470295	0.871219995677453	1.25787999839065	0.692609785346858	0.48855446775578	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.27992882773773
Merged-chr9-120496861-2	2.60304644465612	0	1.40079707500806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-180605338-1	1.4307394378604	0	1.53937363480923	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-37306910-1	2.58738217758206	0.883937897302293	1.05223925721874	0.840054095338264	0.400878056623461	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95348508901398	3.25740504591614
Merged-chrY-90737651-1	1.79026569904097	0	2.17731624690804	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-116193063-1	3.22215231409578	0.978672040900264	1.16178080588058	0.84238957636976	0.399569925661998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	1.75589456049906
Merged-chr11-100720482-2	2.96417068677212	0	1.48648944873533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100694880-1	3.24679515047364	0.490377556329726	1.22121296332823	0.401549583123713	0.688015540491329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69453213775868	1.65067458736554
Merged-chr3-87935909-1	1.85009717212075	0	1.4508027568172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64975746-1	4.63867571597823	0.916717176489887	0.951601981250601	0.963340970859614	0.335376438873334	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60391341779232	3.12704280043501
Merged-chr8-115689292-1	1.88731312870119	0	1.52506531412167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-82998959-1	2.60530228036872	0	1.40274132332628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26481140-1	2.63545129155053	-3.59863829309077	1.21186687499459	-2.96949967636242	0.00298285126591035	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19143458403277	0
Merged-chr9-115316613-1	2.49466533397387	2.69198844176742	1.90001502979949	1.41682481430239	0.15653415283731	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.01704424710181
Merged-chr19-34752911-1	1.13595234366037	0	1.52947459746644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19956118-1	1.93495363644742	-0.38795824350916	1.33868432160393	-0.289805622765742	0.77196494604119	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.577068348605183
Merged-chr18-20704302-1	1.38247172001186	0	1.62140090445077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64986290-1	2.59905228104497	0	1.40063284424934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63883460-2	1.55649730181043	0	1.58416190830658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49178574-1	2.31354147169507	0	1.58894508786095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160383049-1	1.36247795779757	0	1.56187846648051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164677183-1	5.6626205121237	0.626047285998343	0.733011943278288	0.854075150806463	0.393063351293676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03785946669997	3.59232457014691
Merged-chr3-30875210-1	1.78694428465745	0	1.54431692949697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111447213-1	2.57891420710916	0	1.40602949443876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-30573156-1	1.72442022539554	-2.2388329137091	1.45623859680979	-1.53740803094613	0.124193420970059	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	0
Merged-chr13-58453766-1	2.29750573376921	0	1.43178670315353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61849380-1	1.30423620468744	0	1.83400261052925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120094275-2	2.47137546181745	0	1.40532203346885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137950019-1	1.79405674341279	0	1.49337671437673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-26583462-1	3.27437074488752	-0.0437984326360017	1.19180809008747	-0.0367495681563859	0.970684685639282	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30806904914164	1.41437199749648
Merged-chr5-121946046-1	3.17377039313073	-0.0382151574332933	0.901312181508546	-0.0423994684830863	0.966180252058847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93847405924208	1.91178115877367
Merged-chr6-95112239-1	3.98362042443552	1.03154599155678	0.856532059050485	1.20432852530973	0.228462625569964	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	2.29865629870409
Merged-chr5-140610806-1	4.14495233105302	0	1.40441310032569	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39543966-2	2.40811751146244	0	1.47111429243198	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-142081116-1	2.23208084208557	0	1.4617489487965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40545697-1	3.66698294419144	0	1.40463623313599	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94265272-1	1.39386916574615	0	1.59196585734235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-43293761-1	0.875373976079971	0	1.69020472589271	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86578049-1	2.88080957264446	0	1.4014343606342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44205938-1	1.34057706588297	-0.0340614313435084	1.64872561802011	-0.0206592479495839	0.983517477500768	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.413263464506793
Merged-chr4-105245113-1	4.40648707783808	5.08753966623077	1.29790973783148	3.91979466517518	8.86244441423181e-05	0.00532324437473179	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.46518860622008
Merged-chr1-159378181-1	2.05638437861468	2.19373026186487	2.39216819610156	0.917046830335725	0.359118100872336	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.37038902724373
Merged-chr14-54496721-1	3.04354167750336	-0.784136820528207	1.43039442147902	-0.548196223890061	0.583557174666495	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63019750495213	1.58767400493002
Merged-chr11-103375969-1	5.09001512094405	-0.28206512284997	0.75300194553549	-0.374587508733968	0.707967264330523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44128132607807	2.93791047511412
Merged-chr10-8012002-1	1.42023081920433	0	1.55796001775849	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-142334422-2	3.74321275433278	-2.28776568549899	1.23531623337624	-1.8519676368587	0.0640304703031594	0.694307471388211	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	0
Merged-chr7-45450073-1	1.19218166533608	0	1.68375375079443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73053266-1	1.69970480625693	0	1.54927694375196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61082304-1	1.14260889767894	0	2.33540833626786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-23534035-1	2.52951869991908	-2.85757114223424	1.1444328539546	-2.4969321112723	0.0125272937276603	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	0.303163067301871
Merged-chr2-165276205-1	4.24807060193868	-0.851889460021912	1.06714865332287	-0.798285653427301	0.424704741551592	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31260716574699	1.21469436624079
Merged-chr17-5566900-1	1.75187162571803	0	1.48995660589484	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88304230-1	2.79799418331906	-2.79884161534958	1.47180752882561	-1.90163561507451	0.0572188084726019	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0995156753045	0.41385117919798
Merged-chr8-26981072-1	1.40744328928539	0	1.56707246752447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-29835141-1	2.06090702587788	-0.171658635491699	1.93103636747988	-0.0888945637599376	0.929165703940305	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80505237968249	1.67993433463714
Merged-chr13-98959982-1	3.50908367069266	3.64025967281013	1.14806103077011	3.17078933544872	0.00152025350038689	0.0499633978401033	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	3.13740203858764
Merged-chr12-33100744-1	1.68359214750237	-1.9337717739458	1.50724245658483	-1.2829865331205	0.199496794176661	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr2-45232489-1	2.09059090962766	0	1.41697112171991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74524649-2	4.12014792831985	-1.04549302741529	1.28142118398353	-0.815885549952576	0.414565597449754	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17595087342351	0.465515277017237
Merged-chr16-87630278-1	4.17086044493016	1.19574039236972	0.944050595035126	1.26660625887877	0.205296113373571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89990973632461	3.94085952365647
Merged-chr14-91591724-1	3.1660352674036	2.60962128097306	1.23448765441306	2.11393064292231	0.034521191557863	0.464259636787203	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.65765604902853
Merged-chr6-24708290-1	1.0326187055683	0	1.78550376501763	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-23838697-1	1.32507224299826	0	1.75884500565469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41999822-1	5.8544771034344	0.350391425805503	0.7433165195748	0.471389262283499	0.637362782519061	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31874020703694	3.40590291950374
Merged-chr4-40014813-1	1.381733094781	0	1.8813519042673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-82761594-1	1.5786338288349	0	1.42435430929359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-89013025-1	0.71858886217091	0	1.99504702997726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-46715571-1	2.60024119056101	-1.34455938693468	1.42217300073475	-0.945426039054342	0.344441413652423	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47305154250924	1.90221032624646
Merged-chr1-75559655-1	2.52506698147875	0	1.41857330247821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87739129-1	3.49037346618497	0.0437041004044499	1.18343198480615	0.0369299638386981	0.970540848348559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.7953101035406	1.67890752592471
Merged-chr1-120028288-1	3.00774911810433	-3.68739596086155	1.10989407129146	-3.32229539398381	0.000892801223597099	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9616503896733	0.303163067301871
Merged-chr10-121263312-1	3.68308293732232	0.697036920681691	0.75360133241218	0.92494119994529	0.354996494172565	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59790867484798	3.41861037183001
Merged-chr11-64828358-1	3.13024195675588	-2.31851647476363	1.71174561578288	-1.354474901753	0.175584915368419	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94795998544764	1.36637784713012
Merged-chr7-30205564-2	5.88667138525013	-0.697000696129472	0.814071639503191	-0.856190858773603	0.391892218052763	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37705875126183	1.51226750748471
Merged-chr12-16890525-1	6.00564972724941	-0.36069960863466	0.99670039844557	-0.361893713694906	0.717431457756238	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62319166842064	1.03321995648104
Merged-chr11-115202497-3	2.9678349932425	0	1.44273282913558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110342191-1	2.88208576855532	0	1.40335512489519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-57928011-1	2.45339471100333	0	1.42692714015646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55629532-2	2.0510188861615	0	1.42680852910983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46936970-1	1.86253835032612	0	1.45698355034461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-86317798-1	2.27108451093058	-0.603337158632173	1.23301040792846	-0.489320410235483	0.624614873406439	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62745902464378	1.18984215491549
Merged-chr17-90271195-2	3.95881329171923	0.338853631406474	0.967715963162907	0.350158150020546	0.726220012396901	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74819222721298	3.52498291448543
Merged-chr12-115614407-1	0.789131715418662	0	1.78023268928124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57809240-1	5.75447251957383	-2.30003953524795	1.06045551343322	-2.16891657039113	0.0300890184769862	0.423769887793595	C57BL6J_F1_Control-BALBCJ_F1_Control	4.47807185732307	1.61141823534019
Merged-chr11-95521738-2	2.33828306449203	0	1.41331921253755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63956070-1	2.28661578873545	0	1.42395646868663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-123523850-2	2.35430890003731	0	1.40489955068021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80182473-2	2.58612759909192	0	1.47818622955256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73914830-1	1.86606579543719	0	1.41904822343842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58502732-1	2.97246644588695	0	1.38496283268281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12488202-1	4.41136443061081	-1.53413690148468	1.14150905496127	-1.34395508718653	0.178962910779536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42488422888851	0.904676873936758
Merged-chr11-78278073-1	1.56837049028979	0	1.43672138345966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40993584-1	2.33155341102131	-0.705597002549679	1.35848072591279	-0.519401555789888	0.603480746628735	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.600815099743027
Merged-chr13-4110704-1	2.37219194577794	0	1.39161830824161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65483478-1	1.27334974909572	0	1.52317775238888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-117366682-1	1.82953587665312	0	1.6365689221035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22789779-1	2.36496847295619	0	1.44249149254432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121985637-1	2.38521665882938	0	1.42792397203679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115554391-1	3.81798612372453	-0.475658298928196	0.944985219445867	-0.503349988063431	0.614718226983931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27913378949743	2.41387450741157
Merged-chr2-128724267-4	4.84242053832361	-3.44351659511928	1.2050462362675	-2.85758047407808	0.00426884373155715	0.109924242730324	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04828035860944	0
Merged-chr11-87974795-1	3.29573720990377	-1.15747555932729	1.06666823589711	-1.08513174047394	0.277863311149316	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21653520045322	0.577068348605183
Merged-chr12-25089545-1	3.90922956999143	1.80586268655574	1.30700133164102	1.38168389185064	0.167068782473637	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr14-13001289-1	1.41255902926512	0	1.52888280339004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27968519-1	2.16879857398579	0	1.42525715261854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59683620-1	2.53947605907499	0	1.4032873332656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16695223-1	3.82591825184356	-1.60696435885968	1.03545274455257	-1.5519436954644	0.120675696443107	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73302203785805	2.18465264107678
Merged-chr3-96229017-1	2.34402099706087	0	1.45155439951368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41316831-1	1.60637125679678	0	1.52373454151877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-132982932-1	1.88049232452845	0	1.53654550105661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67056747-1	1.6192787365077	0	1.58696796053867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-114898960-1	1.92028605208005	0	1.40922421185411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98194292-1	2.30919599894907	0	1.45295881162086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-96546877-1	3.46247503005091	1.12840415118916	2.0729427411919	0.544348924244938	0.586201386040044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.09662457429765	2.94791456588025
Merged-chr16-36642210-1	2.2228147968426	0	1.46276164866855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-13344983-2	2.0758773756161	0	1.57678985937004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-97713789-1	1.37140521439846	0	1.48387783648701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131592273-1	2.23257456760416	-0.298246167791911	1.15364534282103	-0.258525004801393	0.796001753612377	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05199165378257	2.88435693089526
Merged-chr1-132346340-1	2.05334630035462	0	1.43726570576324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97845776-1	5.09857193231657	0.91865039144594	0.698302778887364	1.31554738033502	0.188326004690977	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33702325444368	3.22558822054436
Merged-chr11-73129534-1	3.06893196181222	0.303314951301358	1.04395448514706	0.290544229290446	0.771399919209943	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.28067447403188
Merged-chr16-76563032-1	1.96395096405727	0	1.47622870621338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28012037-1	2.65882526158474	0	1.39484197719966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-56489353-1	1.15645899129349	0	1.70458818943979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16329864-1	1.68448839115581	0	1.52322490070765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-108077670-1	1.34201524054589	0	1.49252612212206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105911077-1	1.81855797687247	0	1.53249763074993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-62172114-1	1.27235606959174	0	1.68240938027034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-150208368-1	1.18381352637571	0	1.8631260874105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21424051-1	1.21625390368191	0	1.95777904959573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25503834-1	2.92192857134263	0	1.43105790803482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91586019-1	1.86840264499962	0	1.47771240673854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36708041-1	2.37379317664984	0	1.41114845714351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5511982-1	3.45449978374531	1.68137138355684	1.13873957104115	1.47651967694384	0.139804436883749	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.43227527902726
Merged-chr12-54825401-1	2.24585974365016	0	1.47133780523663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172405860-1	1.74405584745963	4.54993913372578	1.48072353416303	3.07278099439246	0.0021207406587972	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.55070997882164
Merged-chr4-142135802-1	2.37310312119105	2.82641021463337	1.36647187615369	2.06839984339018	0.038602439934905	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.70138440361224
Merged-chr7-125466469-1	4.11950228580964	-0.0589149415424681	1.1313087284481	-0.0520768027868801	0.958467496574075	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11380129041314	3.2447446914828
Merged-chr13-45477453-2	2.8971239253332	0	1.4024140999427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67494960-1	1.82972003389031	0	1.43648914000957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146185111-1	2.0869915566028	0	1.42375184710348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63146116-1	2.10864742288582	0	1.43820800883113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-72225058-1	2.14608519946109	0	1.43899089309022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55419766-1	2.92544832811933	-0.843744896492437	1.37076089851173	-0.615530321450307	0.538204551261587	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.465515277017237
Merged-chr3-116436343-1	2.25316524789182	0	1.3994890032938	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-14386627-1	2.48035539602026	-3.27787994586638	1.46663038341987	-2.23497343497212	0.0254190928146587	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17761187261032	0.465515277017237
Merged-chr18-38233166-1	3.00077099532403	-1.10638299586021	1.08460402318252	-1.02008011422803	0.307690467011335	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28937764326066	0.94927122251658
Merged-chr18-34380175-1	2.03818640541716	0	1.45384121870081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-8135341-1	1.42145799177525	0	1.56527438690427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92821820-1	1.43304450045274	0	1.58156266811987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34386184-1	2.65783358353949	0	1.47594738653035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75344787-1	1.7015010180148	0	1.69226242005671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136357543-1	3.71248798149811	-0.979483071492419	0.941037507521898	-1.04085444380614	0.297943107562043	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8802875788743	1.78902213248686
Merged-chr4-40157930-1	2.19559241841632	0	1.56123212705773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29190579-1	2.73096400105052	2.22653861795742	1.31888870749781	1.68819295009477	0.0913741960904505	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.815775955292901
Merged-chr17-29499385-1	1.93331457578053	0	1.7362312051089	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38989098-1	4.66142842472945	-1.19195090255202	1.25877395473956	-0.94691417634124	0.343682513531936	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91772676303785	1.61055102041193
Merged-chr2-131821121-1	1.33027539257898	0	1.49620048771608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112907569-1	1.87218425718587	0	1.47535499734632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25331451-1	1.62363960725405	0	1.44538343828774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38110535-1	3.42682940271657	0.304031572455122	1.44689537115012	0.210126854033302	0.833568666841851	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41926493179619	1.5682414637086
Merged-chr15-78624924-1	1.73280790407295	-1.18763528056175	1.58848034023944	-0.747655007415915	0.454668276240282	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr14-45668719-1	2.89932835414704	-0.326295742896066	1.05183940967513	-0.310214410959221	0.756397912380938	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.22548804685604	1.25298535761957
Merged-chr13-95557875-1	2.86606327497092	1.40255756582848	1.15062117728895	1.21895685001482	0.222860570445213	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.33924509967612	1.98363123366187
Merged-chr10-84162825-1	1.44386657331677	0	1.521028741505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-83759393-1	2.17088241345086	-2.9417751933113	1.28674140029403	-2.28622098631402	0.0222413336184601	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	0
Merged-chr12-52503293-1	7.3420747074598	-0.543988140626329	0.671273733811768	-0.810381984615041	0.417720668713872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26492720551813	1.98150492821539
Merged-chr1-128006360-1	1.93949188098657	0	1.44893379609742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31128122-2	2.29953851918779	0	1.43871941103534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17838671-1	11.3863694934295	0.488558050805257	0.643061263891512	0.759737956922997	0.447411235361257	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98790621793328	2.4920649138512
Merged-chr16-55813310-1	1.55437198419663	0	1.70692425773135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112272138-1	5.93579473569811	-0.365020404360732	0.75605850392124	-0.482793861146434	0.629242110063399	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60978507060531	1.93957782847288
Merged-chr5-77194114-1	2.51701307147977	0	1.39283830945037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40647610-1	3.72754941988046	0.956447823432555	0.809216627644228	1.1819428701273	0.237228370066803	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22281280114811	3.40609125818616
Merged-chr17-34785229-1	1.92701665907243	0.570136966086347	1.55138207333502	0.367502613241313	0.713244142925421	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.71701424649985
Merged-chr4-63719465-1	2.34963389464328	0	1.60678324234539	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54796722-1	1.94931896831526	0	1.43174548681753	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56569316-1	2.9418837598089	2.49545999752559	1.30982664773882	1.90518340868508	0.0567562341187519	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.27673210875742
Merged-chr2-72244529-1	1.37586626673986	0	1.67763274249109	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-125214770-1	1.66908129771231	1.85286409740729	1.40260169054851	1.32101943830019	0.186494882921892	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr3-79683002-1	1.86940427739456	2.08902251878801	1.6336478056543	1.27874717644623	0.200986100873001	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.765562747387088
Merged-chr3-95951635-1	5.78394203293647	-0.962374285924752	0.743824286438143	-1.29381939185281	0.195727812819571	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.83740851127071	3.21760868034914
Merged-chr13-49191357-1	5.51418885505523	0	1.36565783323771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-135745165-1	1.33595679399863	0	1.5828547242024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56567124-1	2.88625504422456	-0.689774242648897	1.26651841420979	-0.544622355987823	0.586013275764905	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.67591700901439
Merged-chr16-65471296-1	5.05099111839224	-0.982205151154575	0.871284327332339	-1.12730726393513	0.259612592263325	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35204052049844	1.66624882212637
Merged-chr9-96381584-2	3.16214017371973	-0.287118249334928	1.26951245685409	-0.226164184356584	0.821073725659454	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.859510663435501
Merged-chr4-133422937-2	4.21516604867143	0.840872366556152	0.974927145644483	0.862497644375557	0.388413728802629	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.32724178272127	2.84898530106579
Merged-chr1-166844735-1	2.00349287256366	0	1.45385481520315	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18608370-1	2.15469027263846	0	1.46728581376676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87893167-2	2.92495252657892	0	1.39136742703582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100640229-2	2.39178825888899	0	1.4129616521236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121536017-1	1.95001983639994	0	1.46941705891321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117018659-2	2.28482790652319	0	1.45658274687542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58507585-1	8.73829597862111	2.22019389468636	0.659067433630042	3.36869003291191	0.000755263129268336	0.0289122172140123	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38049358889031	4.79840668637103
Merged-chr6-108672242-1	2.25933219736646	1.78041209894716	1.44293144227316	1.23388544097586	0.217245595387709	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr13-117958438-1	4.57367703698138	-0.00257992718641403	0.952765892050686	-0.00270782907736246	0.997839467626172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.13134338926628	3.82897064067542
Merged-chr5-28419905-1	1.39727121961971	-2.25415911086888	1.49355501547338	-1.50925750140809	0.131232990731303	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.33962963608869	0
Merged-chr1-88584823-1	2.07312417389675	0	1.50279807437944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140706368-1	3.18614923841476	0.217098765541015	1.07534916594014	0.201886766100956	0.8400052481775	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25781653246323	2.92300757767365
Merged-chr13-94721782-1	1.94597837428978	0	1.49821287037847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60186208-1	1.51056702002046	0	1.53679705908657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90639985-1	6.11770785552304	0.390218928233574	0.844668051877339	0.461979031130967	0.6440963576978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82856958860614	3.66548877625124
Merged-chr13-58479348-1	1.15524359808798	0	1.59239902581299	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99130653-1	2.95677249932342	0	1.39221492340706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60408084-1	2.03829185846137	0	1.46085360023519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103480412-1	2.35918407810261	0	1.44148935625238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62952885-1	1.97813884593944	0	1.45247747950476	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72900960-1	3.06578316045029	-1.55124229768632	1.09196739388019	-1.42059397229266	0.155434831847434	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6847444908354	1.14143228603163
Merged-chr7-127129196-1	2.02943543702939	0	1.41193512053871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144997355-2	2.27736321802441	0	1.4915104757267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-59584233-1	4.60535586038403	-0.655834988316093	0.91798942791584	-0.714425426232925	0.474964154132	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40184156770979	1.33175291456033
Merged-chr18-11676777-1	2.2825166195069	0	1.43490704382597	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78627451-1	1.59550535281887	0	1.57404116002037	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31076289-1	2.43050470299401	-1.49147533454104	2.09905206976643	-0.710547087432185	0.477364941908024	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97381856258121	1.46573328458049
Merged-chr6-133973421-1	1.30253633797732	0	1.54289264709907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30771780-1	1.59934675163438	0	1.51958348564486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64193856-1	2.85930461428728	0	1.44975406366454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-106983206-1	2.52221799247786	-4.31585678526073	1.41509121623777	-3.04987885991906	0.0022893368623613	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14095140344808	0.303163067301871
Merged-chr7-80530924-1	3.29540683502368	-0.674735076069308	1.34112980932847	-0.50310944651	0.614887325490688	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.303163067301871
Merged-chr6-31073241-1	2.96455510040649	0	1.4082629747361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64527770-1	1.39420266119962	0	1.46466342982565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123341461-1	1.6442472316045	0	1.5083958482959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97641911-1	5.57987679951052	-1.2884618645812	0.82233903875549	-1.56682560824442	0.117155459922882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73430231295182	1.17788344834821
Merged-chr19-37508499-1	1.16652347084151	0	1.82536704197721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64386144-1	4.60523227465956	1.1968775446484	0.735882688835663	1.62645155648673	0.103853630800365	0.933279957423244	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82422868307434	4.10916699278329
Merged-chr11-120262816-1	2.36922605695191	0	1.40337435949871	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45737051-1	1.61857461985993	0	1.43683128574307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60431373-1	3.72430922516268	3.28133571455274	1.4093048846181	2.32833629569228	0.0198942534442155	0.319194723428014	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.62144175773092
Merged-chr8-70866346-1	8.34443373819432	0.0752795638729753	0.67138733182465	0.112125386203499	0.910723989064429	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25539583189502	4.29680577464043
Merged-chr18-20649702-1	1.52458878037253	0	1.58343260757989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191177027-1	2.153687286334	0	1.51958479368182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110357683-2	3.28373791605698	0	1.37785041934123	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20804482-1	2.02582234425265	-0.034979515354291	1.22567194581796	-0.0285390519654483	0.977232221739234	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr4-117191430-1	1.69589017827325	0	1.55873209141405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117909891-1	3.47267319408519	-0.185281828860162	1.14059356169443	-0.162443340978458	0.870956742884443	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92713101668536	1.79061031525623
Merged-chr16-94606480-1	1.8701628488151	0	1.50408648019516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-73263634-1	1.03150184761395	0	1.83186594871491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-111418776-1	3.26719675658215	-0.00380178531169411	1.14829181506603	-0.00331081808806196	0.997358354189983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32852444445417	0.921168194051549
Merged-chr7-19443646-1	1.90725198577137	0	1.44585736126687	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-58341008-1	2.68656440837032	-1.74871921933212	1.48265877930382	-1.17944819384081	0.238219754154165	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93765107611301	1.34263109599227
Merged-chr13-59666611-1	2.34020746190145	0	1.43784721402742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95141529-1	2.51973806255809	0	1.4206812429921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11002831-1	1.5745985817024	0	1.64323330439435	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-79797764-1	1.2058465477101	0	1.59456491369715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-52294271-1	2.20233176175796	0	1.41362178957043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-40956292-1	2.2526402046619	0	1.4276304535797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30931997-1	2.35978377219313	0	1.43940580033552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72026713-1	2.0122797537934	-1.03187816426864	2.11133672216504	-0.488732163579533	0.62503132974411	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr13-93253104-1	3.40524218613619	0.17961151744933	1.14430613641879	0.156961071633716	0.875275528083917	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40343015234056	1.4994506617149
Merged-chr7-98688837-1	2.17514845513144	0	1.42992311555324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-112149039-1	3.20839081144641	0.429422369919881	1.34912529740536	0.318296877796115	0.750259752419121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96927967908792	2.05819228035257
Merged-chr19-56599505-1	0.992628495620084	0	1.67024107775397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84376130-1	1.59649462487896	0	1.59408976036095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55650482-1	4.95750921713686	-0.0368827119997752	0.81242283911633	-0.0453984184392113	0.963789741592233	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63657599924846	1.61960275079262
Merged-chr5-44066968-1	1.40858109427496	4.14172845182864	1.89167133206265	2.18945457470805	0.028563816734273	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.16268682694509
Merged-chrX-60013311-1	2.03891918754236	0	1.49554954436363	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129504057-1	1.75331445605635	-0.310720962181439	1.41847195017746	-0.21905330037902	0.826608528160388	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.577068348605183
Merged-chr15-93358906-1	2.00209519650512	0	1.48695295381371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103989090-1	1.79606137230255	0	1.43020532691933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120322822-1	1.8656631026978	0	1.51516351677711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-53158324-2	2.53272629093172	0	1.39419725941591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-151579978-1	2.61072633994569	0	1.42164283578857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64611471-1	1.59647953571206	0	1.76921017207576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23758922-1	3.82537797988374	-0.658585175922102	0.911317125308244	-0.722673982121582	0.469880203826116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.53823966306787	1.62830504494315
Merged-chr12-33126441-1	2.26229225954177	0	1.44400654328743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70263892-1	1.34120002098647	0	1.44713605391958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-103923297-1	1.04814243173442	0	1.61702695285107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50853283-1	3.80672877790885	0.252843827244683	0.926688220750021	0.272846704623096	0.784971056036381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37562316341215	2.228867794393
Merged-chr14-21757008-1	0.841900002227533	0	1.987526723006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41761872-1	3.93216658175724	0.460205327570554	0.801402327997824	0.574250050808192	0.565798604394519	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26211881241837	3.55149449114348
Merged-chr11-70247674-1	3.14850176493378	0	1.49867323423307	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-48937657-1	1.97169220702911	0	1.49002249414026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-28862605-1	1.52314479366563	0	1.65690765457611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121754961-1	1.23578957600869	0	1.77009984311285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3428303-1	0.73456359500846	0	2.04425264343952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104456860-1	2.73045638602765	-1.08488479494666	1.40721363438126	-0.770945340807242	0.440739330563406	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	0.679405493272835
Merged-chr7-24390325-1	1.17035949325742	0	1.63628517159604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84719304-1	2.26313793962667	0	1.45855782446403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56723000-1	2.68197426302746	0	1.41334652844705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21804514-1	3.49183579639643	0	1.41025753445824	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93973767-2	2.81273575652664	0	1.41475031323086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120128260-2	2.58171155653187	0	1.44526822650475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-71831932-2	2.3670942187209	0	1.38930939611794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117095645-2	1.33243441331986	0	1.9816605428378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134803468-1	5.00964639841712	-1.37282129010235	0.909215475317369	-1.50989652878835	0.131069828565426	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.37885915011237	3.08717075118912
Merged-chr15-88539497-2	2.2448651421799	0	1.45229461512861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110639695-2	2.67690793061916	0	1.38949059864035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-64397541-1	1.59351621934417	0	1.42626169925478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46873860-2	7.59536111088099	0.665720984991636	0.583818876059142	1.14028684629957	0.254166816026908	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26392576877833	3.79581050329086
Merged-chr5-93117799-1	2.76184594538626	-0.0390330044038777	1.24447250077469	-0.0313650999757563	0.974978373634017	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr2-73458024-1	3.11553067016093	0	1.44422873150261	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-46564981-1	1.70733656821906	0	1.47329639410504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122703008-2	3.7504096769487	0	1.41335798165656	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-40897061-3	7.49140104839989	0.0350210374319741	0.59943247790398	0.0584236569136715	0.953411171461358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.66282395120017	3.06515813826458
Merged-chr7-110205059-3	3.67544066401743	0	1.38647105857338	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34208223-1	4.7565340511571	0.784407840854449	0.903514724210015	0.86817383251866	0.385299177038635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	1.43926704001285
Merged-chr11-8565558-1	6.19228354940759	0.362682913953279	0.882042493335335	0.411185307616914	0.680936660795169	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.52995590494597	3.25968240894555
Merged-chr8-105477203-2	3.70426651782972	0	1.38205490296653	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116785011-2	5.92145515151263	-1.5691053781043	0.622778071516436	-2.51952573455839	0.0117513049882184	0.22460941907685	C57BL6J_F1_Control-BALBCJ_F1_Control	4.25849804578855	2.29394900075919
Merged-chr6-122834548-2	3.04823569995567	0	1.41368092797658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58211662-1	2.28508372526507	-2.08981640004175	1.38237687946099	-1.51175589746308	0.130595972699143	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	0.41385117919798
Merged-chr13-4666970-2	4.40399296370406	-0.0381915114623624	1.19088117629021	-0.0320699598102097	0.974416259681126	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr17-17447986-1	1.88226701283075	0	1.47557384984944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-86848999-1	2.77628539627887	-1.53171523590554	1.25975079857666	-1.21588748952265	0.224027784428138	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9001726754443	0.67591700901439
Merged-chr1-174999874-1	1.37398083906326	-3.54020067823013	1.69470909344507	-2.08897249204787	0.0367101994368604	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05799583614532	0.303163067301871
Merged-chr7-109713679-1	1.62511284896958	0	1.61102574181794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-113639290-1	1.55919036631185	0	1.5893916775094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129736641-1	1.58193751572961	0	1.64010713670514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136783021-1	1.53411043505527	-4.42448827383007	1.74625366929946	-2.53370306480445	0.0112864325326445	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51693545116549	0
Merged-chr14-33851613-1	1.61734561996053	0	1.5230151298314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-109641844-1	0.847014110754858	0	1.71556749928893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83259376-1	2.74839440909931	-2.06544708337559	1.36695653765806	-1.51098226349919	0.130792969852273	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.41385117919798
Merged-chr10-88679312-1	3.01061427990583	-0.691902826323472	1.40588002040793	-0.49214927040695	0.622613823658717	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0
Merged-chr1-97571259-1	1.25484882825999	0	1.62304427669837	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54948356-1	3.6225807974469	0	1.38878028793216	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-83813538-1	1.56843775698561	0	1.55851704309619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122743649-1	1.38036446258321	0	1.56968449491475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-39665670-1	3.3366107760896	-2.13737247600479	0.995429408994495	-2.1471863867914	0.0317784460390852	0.438660372838657	C57BL6J_F1_Control-BALBCJ_F1_Control	4.34560247748483	1.92622810840025
Merged-chr16-87738192-1	2.87045739216543	0	1.46410359646272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136661125-1	2.03994570234519	0	1.43506463573242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-73113767-1	2.18414527767719	-0.53685729512959	1.17270478782734	-0.457794067784291	0.647100398145432	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15658857927843	0.990331813111976
Merged-chr13-119614722-1	1.60992516052316	0	1.4538436768634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122446825-1	1.75576095864015	0	1.53491502760981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75131507-1	1.32415771378219	0	1.66604323173584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88692438-1	1.17070240448296	0	1.62273731394604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-22931536-1	1.92541033658278	0	1.46381399483722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38940363-1	2.49561278332656	0	1.5023270625098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-86443503-1	1.07265096640596	0	1.79603658873049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91475130-1	1.4354524732803	0	1.66065770168486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-44708609-1	1.6685227415975	0	1.57055926676698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56322950-1	1.66054095027295	0	1.541059642922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97155686-1	0.971702810626862	0	1.64535407605495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82469839-1	1.47653426581987	0	1.54173073052269	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49372189-1	2.21101448028741	0	1.40987354500558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93135564-1	2.35300111227904	0.537258020011237	1.36353856140487	0.394017474252941	0.693568138094146	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.723581231604105
Merged-chr19-53774114-1	1.70442419621783	0	1.65793323746094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-178983971-1	2.93345041916505	0.278247648076276	1.17950598868938	0.235901852762489	0.813508830525743	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57794411337625	3.25013509069802
Merged-chr11-22987470-1	2.69324098074753	0	1.42310932610785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135160222-1	4.25109086480229	-0.421005432555676	1.01797369360775	-0.413572015857906	0.679187571094412	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63357992545343	1.7421731315418
Merged-chr2-31767974-1	1.11361222258953	0	1.56709455490319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-14838907-1	1.11608429444769	0	1.73010925524094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-17741085-1	1.91880436251007	0	1.45622734762179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33439330-1	1.73404263078137	0	1.51086609511784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37185433-1	1.34697600648276	0	1.79029755652851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-60667121-1	2.19636564042227	0	1.45470616972489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38446374-1	2.68189587134853	1.62413070985365	1.41766458649525	1.14563820336997	0.251944883037274	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr7-34676338-2	7.11400976490981	0.089826983266282	0.829963064753647	0.108230097315168	0.913813170971963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59740610925562	2.78810699816762
Merged-chr6-125640743-1	0.949890206702577	0	1.60412460280809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-152368976-1	1.93781149278167	0	1.57152326031162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94587560-1	2.4045273634178	0	1.46248942080742	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110676257-1	2.1467679986508	0	1.5173660052366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102959040-1	1.79709746643632	0	1.58014268205422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40480217-1	0.812074324780963	0	2.03937427737696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102930768-1	1.22613110483178	0	1.5208113943259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-32997028-1	0.81179900693463	0	1.79928657563917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-65701082-2	2.21652304165389	0	1.53063853342598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-20662470-1	1.19386059760235	0	1.49767371057025	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35643419-1	5.64767008516415	-0.873885623688343	0.789887570949872	-1.10634178309384	0.268578613226764	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63707381831914	2.44591482799716
Merged-chr6-89606142-1	1.67491274448139	0	1.56850400891662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-94559616-1	2.20916424663363	0	1.42667162787762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33966866-1	3.82994909465345	2.45014913958435	1.14922070015554	2.13200922960468	0.0330060878185974	0.45068523680762	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	3.96572623357486
Merged-chr8-120335545-1	1.56135301920576	0	1.53604699417978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-50905451-1	2.55749288834552	-1.55504609364214	1.24551814737145	-1.24851339735509	0.211843105238178	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	0.723581231604105
Merged-chr8-106527408-1	3.15335535499375	0	1.40751619978784	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-164864744-1	2.63915451839213	0	1.44650580660632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-151942709-1	3.01232467747455	-1.85707689288438	1.30333847670763	-1.42486155827728	0.15419722370228	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr17-79786477-1	2.64410773530327	0	1.41945905479071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146784795-2	3.32797558113415	0	1.38949117147339	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13982401-1	2.4842221938769	0	1.41580987498988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104035092-1	1.78776718732637	0	1.48026781109785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47546328-1	3.1274312705252	-1.2360429163897	1.26884189141802	-0.974150463308186	0.329981836495004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	0.601513806634888
Merged-chr6-3509930-1	1.95645404959951	0	1.42357461677448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36668748-1	4.97674833658482	-0.749112308432034	0.907876887681378	-0.825125431208176	0.409300382929533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.65182216023706	1.48421760435807
Merged-chr2-27734515-1	1.92673794533334	0	1.47587108262382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-9129064-1	1.30087951449382	0	1.56355009069736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65444212-1	4.46804675852019	0.320208852528739	0.96105900935612	0.333183341929513	0.7389958916734	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58511711566533	2.90904249914809
Merged-chr18-50100024-1	1.94296556834103	2.31473840110819	1.46240173959625	1.58283345706854	0.113459428797415	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.13341594473881
Merged-chr10-95297238-1	2.52199023608704	0	1.47959768021155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47676724-1	1.81627705104575	0	1.50969051865189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167276734-2	2.97735838608494	0	1.39787592352159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-14164184-1	1.13378012018976	0.747769344049321	2.45400845448788	0.304713434333041	0.760584416802013	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.51301315377886
Merged-chr19-25134083-1	2.39195735672128	-1.67689602895914	1.06273589191391	-1.57790476610249	0.114587489907688	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.17829743477451	1.34263109599227
Merged-chr14-51237060-1	2.42464445487289	2.11066918331013	1.30154992363553	1.62165825911198	0.104876540901111	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	2.62447456802762
Merged-chr14-57856308-1	2.20127799913678	0	1.42430641525696	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155096094-1	3.27655048029681	0	1.45492164910928	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134357048-1	4.99278678930768	0.774749678319196	1.04056292875141	0.744548606251844	0.456544646861192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98376133073541	2.36765161503938
Merged-chr9-48432643-1	3.08155358257018	-1.89513853195728	1.29535702005272	-1.4630240949944	0.143460785934506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr14-70106790-2	2.36928448983883	0	1.42280547602697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116625954-1	4.24114276494344	0.170268100744106	0.780537460905975	0.218142125486808	0.827318376251866	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27643187026249	2.74160503006196
Merged-chr19-55850921-1	2.4058435950598	0	1.41937730193724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67337407-2	4.73055289215717	1.50601872523879	0.847396050859161	1.77723122937836	0.0755302032294485	0.766855868014492	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24302299519605	3.08722445161716
Merged-chr11-85925614-2	3.06313881327978	0	1.3830280080676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117769152-1	2.18351405320625	0	1.47087870957612	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101679795-1	2.8599551843602	0	1.38869360634817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-28943650-2	3.35595826772943	0	1.37774491515347	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-105275391-2	2.68444636746943	0	1.39987468093369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19818100-1	2.56895186085804	0	1.38215548544534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-43950152-2	2.69164654741633	0	1.39984208124182	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34169482-1	3.66181599655356	-0.0411788058535873	1.02489344153691	-0.0401786216836712	0.967950721290196	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.44790810950236
Merged-chr7-38061668-3	13.960993129425	0.245924750200168	0.443675254877853	0.5542899846147	0.579380403474348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.28767312337587	4.55823191093693
Merged-chr12-82220875-2	3.16819725745208	0	1.41592283337226	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-128321158-1	3.03019416256927	1.7849318690045	1.30073886533956	1.37224458849282	0.169987309059646	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr13-69514875-1	1.97832998734247	-0.0413180853369639	1.30030701334456	-0.0317756383015179	0.97465097464259	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.02674429890598
Merged-chr9-114789836-1	3.1791006526774	-0.584418712121238	1.29360340211113	-0.451775800193073	0.651430505022403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.601513806634888
Merged-chr11-26603186-1	2.42382117979818	-1.91405426787127	1.36930325134909	-1.39783080627718	0.16216388105232	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr17-81581349-1	3.29122520374258	0	1.39906081910316	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34901877-1	3.35897428136943	-3.12553845019765	1.08377272942958	-2.88394269880063	0.00392730207401421	0.10383144877838	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51070657633612	0.71701424649985
Merged-chr12-21320191-1	1.97236045774786	1.06460129487506	1.25750695750724	0.846596743278003	0.397219929805234	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	1.96748130499275
Merged-chr6-72149799-1	2.5285584526877	0	1.45000456890454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-64611213-1	1.63145154281933	0	1.53718271604197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73534722-1	1.82826209733556	0	1.43520929986805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119434542-1	2.68630360129331	0	1.39477951607927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94801188-1	3.38837592024161	0.754432495421407	1.37658340568617	0.548047065150659	0.583659586378598	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.57821186140479
Merged-chr1-121314961-1	1.70195329441011	0	1.49552301474202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-89017900-1	3.86676401189311	3.00387163301496	1.29050415868459	2.32767295851011	0.0199294760958428	0.319564077132495	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.00114351279961
Merged-chr12-114361881-1	2.95445250009711	-0.952936674072588	1.3121209814429	-0.726256715310408	0.467681409135836	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33656249313791	2.74237610359616
Merged-chr4-132753115-1	2.20288904974583	0	1.47669159241063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-89547988-1	3.08532404388102	-1.03531381296491	1.1728156852257	-0.882759180327362	0.377366399549038	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89417081547303	1.46460328489499
Merged-chr13-37801358-1	3.97380836419795	0.491270825101037	0.891913644530222	0.550805370131761	0.581767102485251	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58656857412163	1.67656321522231
Merged-chr4-140478124-1	1.95762037354281	1.34536484821727	2.39647315122333	0.561393666159162	0.574529200912876	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr12-40712502-1	1.34511594215638	0	1.82295175724371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91061165-1	2.62544311629884	-1.50748909578635	1.3398624650017	-1.12510734136017	0.260543550765342	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53350380922037	1.45224061799255
Merged-chr12-34554000-1	2.00962587536842	0	1.53101636896856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-27676953-1	1.62510752730672	0	1.47658709668584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27684192-1	1.72447276718904	0	1.42769085869959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90032339-1	2.25159108326242	0	1.3958206072403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-113587737-1	0.918755298932255	0	1.63792174899904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34852326-1	4.28679605802924	-0.345947519198075	1.15285662039245	-0.300078529349391	0.764117256053713	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.723581231604105
Merged-chr6-29649917-1	5.20416842409692	-0.0524450829397508	0.759174523820273	-0.0690817213884362	0.944924570484323	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09282686802642	2.03427056425014
Merged-chr4-86553452-1	3.04709668106877	0.086159024970406	1.19470722322389	0.0721172713243565	0.94250858148457	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22392366263603	2.68772519508889
Merged-chr7-30206712-1	1.18630416057525	1.0761571493822	1.8628792137872	0.577684876946153	0.563476891177744	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0.788686275880602
Merged-chr10-67760690-1	2.62996174330266	0	1.39277499147996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121720882-1	2.4517352974361	0	1.50300928709392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-51484268-1	1.61242822421654	0	1.56562407523857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13561459-1	1.09439134623855	0	1.66436864208152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77359691-1	1.26228534269937	0	1.62416351206939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101131743-1	4.83655310870774	0.269398497607499	0.859092722065287	0.313584890999723	0.753836336357055	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28465449304378	2.67397940148119
Merged-chr14-115757033-1	2.35684719313546	0.582180285288087	1.43649933155875	0.405277101421524	0.685273836349091	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31387409893957	2.14837054221607
Merged-chr2-181527765-1	1.93481743765299	0	1.52262873022507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34180004-1	2.52075613806934	-2.71614665054268	1.33692901479755	-2.03163116401807	0.0421910093279142	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	0
Merged-chr8-88242067-2	4.97814339620171	2.27166867049862	1.13767409307428	1.99676575596444	0.0458506351739007	0.556876566348899	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	1.73194315363139
Merged-chr6-51209175-1	6.24966844919993	0.703093652271637	0.674561588704415	1.04229719575646	0.297273912087941	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98217603637558	3.87010437118385
Merged-chr17-33986064-1	2.43140121004064	-0.193009113533671	1.25308291705193	-0.154027407849238	0.877588125113818	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61896726489383	1.93681263768315
Merged-chr7-119881382-1	3.77095980561911	-1.34612742163965	1.35386613682922	-0.994283987922398	0.320084628847023	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr2-163804446-1	1.3584658769948	0	1.51027201805698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-4001932-1	2.38104102036982	0	1.44445833957939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-147404719-1	2.03792922202629	0	1.58752921711445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74822837-1	2.35673051558674	0.803629652911652	1.40067309059001	0.573745335946404	0.566140144668253	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.8090753758428
Merged-chr18-65207693-1	1.74982810997943	0.59467321812113	1.64148509920835	0.362277560976903	0.717144624686503	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr2-21909720-1	3.0951453902687	0	1.39207459976977	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-72364722-1	2.38821118966677	0	1.44263237159791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101641223-1	3.05072325501189	0	1.49415101087965	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140181616-1	2.05006848517513	0.438094216060686	1.5251877580216	0.287239530842393	0.773928919795217	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71756895783173	1.57740420521144
Merged-chr7-125626935-1	2.25869195858377	-3.44161836716682	1.4533646037676	-2.36803508097349	0.0178828401695494	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6950503635711	0
Merged-chr3-9946335-1	4.58844478226213	-0.423636837087362	1.16775211251477	-0.362779765112181	0.716769408707765	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56070666783485	1.19182800327718
Merged-chr1-97673623-1	1.59041558995201	0	1.53791450017721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101907399-1	1.66315135844216	0	1.44180174911194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-42159685-1	0.917985077325007	0	1.87954706112926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57035773-1	3.00096035225149	-1.79021303052386	1.46890385418671	-1.21874078103978	0.222942594299945	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64751895429196	0.788686275880602
Merged-chr6-91281305-1	2.03031631119655	0	1.50789355355763	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-89994043-1	1.44314242900065	0	1.59748338847348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65424881-1	2.4091363979124	0	1.53750130605902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19522394-1	2.16464271308025	0	1.4453854092504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27800916-1	3.63217370985398	-0.908173158006463	1.23115770197376	-0.737657861824284	0.460722384551556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.33962963608869	0.601513806634888
Merged-chr10-50699132-1	2.36934251234098	0	1.40889349577226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90448990-1	3.32300172349892	-2.82926690858077	1.19253374078878	-2.37248373929396	0.0176689408470939	0.296022193333029	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0
Merged-chr10-8765075-1	7.49302982659795	-0.776686005072789	0.671717824031348	-1.15626826814192	0.247571443468131	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57876760013094	2.93341994954996
Merged-chr3-114230907-1	2.39551158419338	-1.04144691611791	1.44043817023044	-0.723007024974419	0.469675568270965	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65917935940748	1.14046671619316
Merged-chr2-145469532-1	1.56639834786724	0	1.48735588817004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-32612275-1	1.1102803689571	0	1.69520975504438	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106193169-1	4.32924955493606	0.861925656266833	0.812826723848152	1.06040516505933	0.288960313414527	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92245040002336	3.04134353641259
Merged-chr15-59509212-1	2.33303483062685	0.636622155978318	1.4473581309731	0.439851162165579	0.660044909593996	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.601513806634888
Merged-chr10-70266616-1	1.39397712593238	0	1.86098473563788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124054600-1	3.07083289985694	0	1.43040701805898	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99433065-1	2.06981978410693	0	1.4601605147024	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47022667-1	2.70685355077108	-1.52765654713483	1.31043850498809	-1.16575981346696	0.243711569282473	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65215194967867	0.601513806634888
Merged-chr16-90072912-1	2.52677713097487	0	1.39258200497143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-13343919-2	3.04288989439895	-1.29370073663779	1.00912573105301	-1.28200153541603	0.199842107611073	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.03247245696714	1.02186287315087
Merged-chr7-90139818-1	2.7351413807551	0	1.44261812692368	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-57762784-2	4.97117641346393	0	1.37702809754484	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55550930-2	2.58791692979403	0	1.39098931388619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25192072-2	2.68008990301368	0	1.39989719407765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36589190-1	3.47599592153006	0	1.38196163851459	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-15665249-1	1.88116560249303	0	1.56039945177018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-154823237-1	2.53496934786235	0	1.44000971832173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-29986757-2	2.91526058093868	0	1.41174030001261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-19853398-1	2.6568015608032	1.19937567922074	1.48437668830954	0.807999538571727	0.4190908477719	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52489444364345	2.51344929304801
Merged-chr12-40569737-1	2.65684286533065	0	1.50905073326088	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-102399177-1	1.47462692599737	0	1.56474835975337	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155336426-1	1.47871922642045	0	1.4937377758633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-30840286-1	4.12627784511775	1.49667864263396	0.786686906948105	1.90250864659769	0.0571046895370055	0.646160245325163	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.91688136005783
Merged-chr17-23654664-2	4.72088331657602	2.45384054658931	1.20019139393766	2.04454102819268	0.0409001285429616	0.514927884933812	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.837303648891292
Merged-chr6-52957866-1	3.19451612351848	0	1.40538975585244	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31531990-1	1.74725047086194	0	1.72498247422434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85698344-1	2.24996927937409	0	1.4216426513914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79751770-1	2.65613813015585	0	1.46402362459442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28809558-1	0.87377569652768	0	1.623887535233	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88471723-1	2.41063133965526	0	1.41088030177393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106234491-2	5.47327421883755	1.26806198717926	1.01882367724658	1.24463340958688	0.213266533699241	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69486619385668	2.96697392623531
Merged-chr9-52287581-1	1.89093998535776	0	1.48614516429899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35450413-1	1.53781035228955	0	1.74540796415598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-50377074-1	3.8456976805679	-1.28268338099737	1.10870431304594	-1.15692107075282	0.247304609174715	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42690496303314	0.67591700901439
Merged-chr8-111581695-1	2.21344587908375	0	1.46181273625488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-57335617-1	3.16620018884788	0	1.43189466419255	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120582322-1	2.40985007452233	0	1.44473667507196	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-39852825-1	1.66269912533037	0	1.46298872676283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-63897683-1	1.29295123274042	0	1.56158826241971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102389919-1	1.85630523027059	0	1.5246632048572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-179432698-1	1.53908613340818	1.38893218871186	1.86192837670318	0.745964348623962	0.455688951592065	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr1-154086214-1	1.30400845115849	0	1.95433117792468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-104030993-1	3.04885877956009	0	1.42908285124511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-20797860-1	1.90695371934189	3.18308035613828	1.40237688913301	2.26977525143484	0.0232212228988987	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.56379394835609
Merged-chr9-62353975-1	1.17799853023972	0	1.66666893706466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101992676-1	1.74495398044581	0.594647896637925	1.64168753648531	0.362217464299574	0.717189529795361	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr11-8717018-1	2.14235704366505	0	1.50270662398666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-46905073-1	0.894470335975648	0	1.65061638879216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150188425-1	5.65057388398433	-1.17049849187224	0.734774036737975	-1.5930046971565	0.111159137314542	0.970526749964851	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58458746821983	2.55795048470371
Merged-chr10-75221649-1	1.94436706315274	0	1.46153256308793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-46521024-1	1.4958623392337	0	1.46009873292466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95948774-1	6.09335287789522	-0.947532438672576	0.844486174996231	-1.12202244006754	0.261852898866329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20062585554184	2.50361789555104
Merged-chrX-159810511-1	1.19408637746011	0	1.69121820199843	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116430112-1	1.58076957731149	0	1.47028255575729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-105317590-1	1.27545593865327	0	1.75378984344629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-84048438-1	1.86814094428084	0	1.62540799270122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55766132-1	1.18680819778466	0	1.77974033099422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44136069-1	1.70400168481394	0	1.50101314107922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137481340-1	1.75206977924365	0	1.51445145025263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-72644793-1	1.74908119807493	0	1.60543481469522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46965170-1	0.97477777485594	0	1.75232237223349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20263193-1	2.74292956162934	-0.431908402922321	0.964686933845873	-0.447718723835568	0.65435620688706	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.82306449654395	1.30139522650344
Merged-chr1-131678769-1	6.04689619202704	2.5878876205087	0.786451901616066	3.2905860042946	0.000999789342438375	0.0358729695482559	C57BL6J_F1_Control-BALBCJ_F1_Control	1.4217268527323	3.83416403835403
Merged-chr2-102201679-1	2.75458074343716	1.03367670079594	0.906262926586313	1.14059250408661	0.254039538054302	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.13118170172995
Merged-chr15-64140273-1	4.84327790879768	-0.86139736399645	0.997038478996486	-0.863955987800433	0.387612068635121	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97376143277691	2.24856647897162
Merged-chr14-31237219-1	1.56924422303024	0	1.5183789180856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-190996448-1	1.97487302021298	0	1.45442807023422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-22129793-1	1.3748229964832	0	1.61416317071502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129901152-1	2.84504466291911	-1.9971448465284	1.44815783588821	-1.37909335366299	0.167865972799558	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr8-124955946-1	1.546978979586	0	1.60502418724031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-47259752-1	6.74482360321268	-0.0414640775400895	0.699531024473145	-0.0592741080659265	0.952733783615505	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.2180769473006	2.92084141183272
Merged-chr1-171888285-1	4.55777145517648	0.0328704457791375	0.893536844150774	0.0367868946807425	0.970654923506348	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08074679528142	2.75116276698767
Merged-chr10-91033434-1	3.26000094150422	1.73058500352028	1.20365492180163	1.43777504015016	0.150497893529387	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78590048821142	2.86934763514065
Merged-chr5-129999261-1	8.20375034559241	-0.79989037840111	0.683240956152312	-1.17072955184905	0.241707502709356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.51188125539224	3.07402580647674
Merged-chrX-109163974-1	0.90846555083132	0	1.69544494828713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-159182688-1	2.82975815976085	0.555622148530691	1.24816439614964	0.44515141614733	0.656210334042695	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97028759951809	2.10358638164113
Merged-chr6-134636210-1	2.50889741780535	2.8826302457305	1.42908526132464	2.01711564994978	0.0436834458188877	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	2.01763086299621
Merged-chr1-170478385-1	1.21033759767231	0	1.56531731003142	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75810107-1	3.75203927003933	1.66315222882495	0.919760902583264	1.80824410360756	0.0705685171996635	0.735549576454872	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30083272599378	2.50220634761663
Merged-chr3-100732099-1	3.34170951802809	0.461491414955521	0.943340097755732	0.489210006076747	0.624693026233253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	1.74224738577465
Merged-chr14-56304386-1	1.45879198102332	0	1.69582186823582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129629842-1	4.52191722711048	-0.646728760691055	0.855465505531189	-0.755996304362358	0.449651411464242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.25280060054708	2.56121441540856
Merged-chr8-119811585-1	3.27586114906868	0	1.40664645353832	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38911953-1	0.951751792872064	0	1.79203530958564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63811276-1	2.85743546914203	-0.304637976683915	1.13945411699815	-0.267354316544551	0.789196369654275	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37850366884776	1.97601552142256
Merged-chr18-55446953-1	2.53408084298786	0.526925067636966	1.31339780400367	0.401192286168535	0.688278559570138	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.10669213789164	1.36707655402198
Merged-chr11-50206199-1	1.98057411866347	0	1.4022611806987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40617618-1	3.14062177599433	0.903389636479096	1.06082863312197	0.85158866217672	0.39444243455235	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	2.06611709152988
Merged-chr4-88503880-1	2.20564641907414	0	1.46675077286868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97718031-1	2.08427191958062	0	1.46748761434521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146749987-1	2.70065422548517	-0.0352991140529115	1.40290933932658	-0.0251613650742789	0.979926253396588	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.601513806634888
Merged-chr16-33408521-1	2.43444922845036	0	1.42391903184645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-14630930-1	1.50731158939755	0	1.5427983535836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6172583-1	1.53333022250827	0	1.46811665788128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129385854-1	2.0397361274564	0	1.40943251156048	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102880770-1	1.29754125056578	0	1.66268499090575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-22122739-1	1.99959073455242	0	1.47941145030644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127489574-1	4.42274441317136	1.68612128991683	0.949880106292566	1.77508853880291	0.0758832691167769	0.769291052950182	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	2.97132237404599
Merged-chr17-34636208-1	7.53884969281308	-0.449252165378655	0.769004142756763	-0.584199928713199	0.559085809492315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.99545268060564	2.99857077066224
Merged-chr8-56064804-1	1.78790726782715	0	1.57215554313846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58711948-1	2.72045022971537	-4.11698919435666	1.18806085339701	-3.46530161530447	0.000529637121672108	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98794568696598	0
Merged-chr10-121387052-1	5.9927401757595	-0.2192674075095	0.869513720391611	-0.252172452679351	0.800907769724737	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3931664686665	3.4436174369594
Merged-chr19-58064559-1	4.72207933012292	-0.571881353051088	1.28989007278785	-0.443356658924492	0.657507779729872	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.465515277017237
Merged-chr18-38484142-1	2.62058062891596	0	1.39409590759604	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36719560-2	6.06914574067469	-0.064683722166187	0.898584894628021	-0.0719839856566513	0.942614652380747	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50954942419772	1.35418021299255
Merged-chr10-99253595-2	1.97061214180466	0	1.45866508405217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146047971-1	2.28357592661775	0	1.42495734224205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25240811-1	2.58534690011986	1.41275829654512	1.3301326330537	1.0621183643181	0.288181954140586	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.28051966905443
Merged-chr13-35940617-2	3.69435469413138	0.326340751930146	1.06185928451008	0.307329564934503	0.758592534312478	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00443616959195	1.39293125551424
Merged-chr15-89231198-1	1.92765286620342	0	1.50250988656776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92509773-1	2.56213971036501	0	1.40443422565867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139681667-1	4.2642639522167	1.17276507581287	1.03552559688121	1.13253122795322	0.257411163219268	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.6036906679178
Merged-chr7-130859007-2	4.22748401759866	0	1.40638787383369	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-30727308-2	2.26288693568175	0	1.46321515403293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52729160-1	5.3426902925445	1.0861527232776	0.793982716252217	1.36798031121445	0.171318239080783	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24287124256397	2.91472213702626
Merged-chr17-45478663-2	2.45757590838347	0	1.42262405552548	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-57667184-2	2.96665954438158	0	1.3790362071047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-179232213-2	2.48627044012998	0	1.42835606049111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136434612-1	3.54739706855075	0.555739479363114	1.34244124152433	0.413976762761011	0.678891124832602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	1.41398715281163
Merged-chr8-22139851-1	1.10267093020424	0	2.32391033695035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-115662387-2	2.32834755691782	0	1.39531307357632	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-158552393-1	2.18697788492337	0.475506793691203	1.52140164880269	0.312545207286595	0.75462621203874	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	1.45451904642141
Merged-chr13-5302673-1	2.19427431682019	0	2.42487138533169	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77782573-1	1.87818261964444	0	1.54557103342043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52945455-1	2.16438424352979	0	1.43434953778051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129600050-1	6.99387657604188	0.256144391888634	0.659326682590948	0.388493896352059	0.697650570080167	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57847521883182	3.35277743905368
Merged-chr14-54581992-1	2.07547774506524	1.75720740014106	1.4744135227805	1.1918009249042	0.233339313048815	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.31037834433945
Merged-chr10-52331051-1	1.5605320681397	0	1.55638731645515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-37656424-1	1.84765477412473	0	1.43941274382423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-119070610-1	1.5957946113675	0	1.45710374412786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75495502-1	2.92429412866324	0	1.44079431383238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62118744-1	1.45145288466669	0	1.47490811129833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-26443275-1	3.12773701626509	0	1.40243295848549	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25250217-1	2.57396065624911	5.37202461105714	1.26527303052277	4.24574339408593	2.17869859735003e-05	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.89075978549605
Merged-chr11-106687534-1	1.99494426556124	0	1.41697926540832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81016453-1	1.46712835412906	0	1.63676810912098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134989561-1	1.30879817459112	0	1.54217616422265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-3426011-1	1.28057607243812	0	1.64083251866415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129854357-1	5.03749599060354	-0.0153794020189356	0.820946855494139	-0.0187337364361772	0.985053515188521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.69652264620186	2.59428058095379
Merged-chr10-67201181-1	2.72726095241148	0	1.45088319940381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-58511837-2	2.44710879440007	0	1.47529743627688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84945104-1	1.90554052796737	0	1.43329312430246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-143368393-1	1.49030922037365	0	1.55769911406523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15701789-1	2.12278038805305	0	1.58716231101896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19006293-1	1.43335632135349	0	1.91047146887694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-36211079-1	1.01408921020392	0	2.16042228356686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3579892-1	4.94703512361878	-1.02075064623317	0.749721994023454	-1.36150553721282	0.173353984870409	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49523235442522	2.16354697850882
Merged-chr13-120320787-1	1.1533239420828	0	1.54016446093378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-136362800-1	1.71463473625603	-3.62427032471589	1.42581063361996	-2.54190159566584	0.011025120870082	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62319166842064	0
Merged-chr8-119686384-1	1.85401505915802	0	1.41523828697883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64174688-3	3.26998376863531	0	1.385932771423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-60138521-2	3.00851064645891	3.43682638658501	1.24407237890396	2.76256144326015	0.00573497663749633	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.02930922537333
Merged-chr9-115855781-1	2.44004639957625	0.1731741531613	1.24089123874559	0.139556270327415	0.889010593625913	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65013357957091	2.06611709152988
Merged-chr2-11113456-1	1.83165536722479	0	1.4648922866755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8735462-1	3.77335380819059	-1.57627566302103	1.17510057718889	-1.34139638224997	0.179791791554884	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34781116627824	1.19182800327718
Merged-chr6-55054168-1	1.42037525253264	-1.21596557366852	1.56953658331028	-0.774729042061542	0.438499786183711	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chrX-159765003-1	2.22420740261883	-2.77981541373242	1.23074164005207	-2.25865065686314	0.0239051240825596	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61438578437986	0
Merged-chr5-139785872-1	4.20636923876682	0.0442785290320371	1.00649085876128	0.0439929768329264	0.964910002124607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94305846690019	2.93944821803766
Merged-chr1-152756650-1	1.57398595387895	0	1.53093444519146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-57765185-1	1.60164579021613	0	1.53366076771655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64328827-1	2.06316189329576	0	1.63517077211001	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66942788-1	2.15496247226663	0	1.5183045526934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-38139122-1	2.26081407333306	2.03098281200695	1.49319140931038	1.36016240070987	0.173778537932734	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.44591482799716
Merged-chr3-81503983-1	1.74623263733186	-2.69218988806096	2.39098591150813	-1.12597480190205	0.260176185241677	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.26536785917363	0.71701424649985
Merged-chr8-126751597-1	1.75239139741021	0	1.65904796428471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15470289-2	6.04166350111087	0.174744198666099	0.927000996061027	0.188504866131336	0.850480901276553	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08209013916031	2.74024820630341
Merged-chr12-52615904-1	1.89995776532992	1.38896507050485	1.2500896159018	1.11109239916601	0.266528579227764	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.14478899401529
Merged-chr19-46985346-1	2.59394587134639	1.6660216472207	1.32425060404086	1.25808637892024	0.208360518851913	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.03838943879457
Merged-chr2-91500041-1	2.92186488227404	2.13225657612738	1.27053234275146	1.67823872276227	0.0933005051323742	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.97908007631626
Merged-chr10-95262623-1	1.84030789906901	0	1.53101105545691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34282518-1	3.24895414522836	0.131282286568068	0.989800327546849	0.132635121361742	0.894481954972502	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21550655935007	2.28242002473277
Merged-chr7-39526384-1	2.61022313196975	1.04712863024937	1.3145528176763	0.796566418761589	0.425702886964465	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6950503635711	2.51208348622137
Merged-chr17-45029305-1	1.45422722818279	0	1.66520601096814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71090028-1	4.35846690465316	0.561849880922547	0.990373421712189	0.567311146083871	0.570502805634773	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.85449916425446
Merged-chr4-137911616-1	2.22541753210827	-0.962367654495374	1.64157617508885	-0.586246114618035	0.557710136492086	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00182956598795	1.27336184263348
Merged-chr8-6634114-1	3.00536445193148	1.87669304514694	1.78312186407281	1.05247604381924	0.292581195951747	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	3.47870516110469
Merged-chr2-32992298-1	1.13455940865096	0	1.52339282816791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-128361671-1	3.22221654964054	-0.800316088677633	1.13158899356335	-0.707249799379418	0.479411256159612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.57732336166398	2.43214483180638
Merged-chrX-140479390-1	2.3229390411129	0	1.4523025864555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-23687273-1	1.76995996138232	2.55426326560418	1.32389531900461	1.92935440509348	0.0536868799439803	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.28067447403188
Merged-chr6-145308921-1	3.88685391313807	-0.211094226925184	0.863368807036412	-0.244500641214712	0.806843105422011	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03728135155531	3.46536478828742
Merged-chr8-31033504-1	2.27346677600891	0	1.42124948313364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102176038-1	0.777847761384347	0	1.8653134180677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54767338-1	2.06055333355119	0.191043992114238	1.47591586373009	0.129440977503563	0.897008725038226	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	1.09982365757507
Merged-chr1-8141452-1	1.87040415416717	-0.622181535634215	1.64911193818706	-0.377282779432307	0.705963468263389	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	1.08976818821237
Merged-chr19-11777411-1	1.20811839115442	-1.346277255841	1.54718541615472	-0.870146035364628	0.384220602577022	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0
Merged-chr17-17655241-1	4.05419901447025	1.25425626170814	1.04552819516704	1.19963886914379	0.230279623987204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	1.75754683437929
Merged-chr7-128133207-1	1.95319948077633	0	1.41637690544957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133198889-2	5.95183955658642	0.0164674857781356	0.865864500866054	0.0190185482389733	0.984826308730534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44972672878163	2.82334827302368
Merged-chr4-155144440-1	3.9103957065152	1.29469476586851	0.83598347671081	1.54870855936353	0.121451795363006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	3.06155674521588
Merged-chr9-119265896-2	3.37916716790488	0	1.40648362391109	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127553674-1	2.43961587704279	-1.91825458720998	1.39541429300321	-1.37468463439737	0.16922923697526	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr5-64424957-1	1.76263391187274	0	1.45583735467486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-6741721-1	1.54750996141706	0	1.51800092651406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-73985118-1	2.80707479395964	-0.132425992183686	1.15257280255517	-0.114895989121127	0.908527564259438	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	0.662147012823607
Merged-chr11-113133558-1	1.44208657077241	0	1.59788161682582	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-100164267-1	2.31728463754385	0	1.42082288644396	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-48124914-1	1.933820836829	0	1.45263541371392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-97110845-1	1.86987805394298	0	1.56938376021595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116512555-1	2.06596578325615	-0.612938356403891	1.29142792523194	-0.474620646207422	0.635057387650978	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.02674429890598
Merged-chr6-71419073-1	1.49108638708296	0	1.55694506178546	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70029629-1	1.47595105698194	0	1.58093456212353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117413525-1	1.79546790827635	0	1.51108414817069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-106301252-1	1.12095425661811	0	1.75031464797394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73896714-1	1.80736956209899	0	1.75990227719241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118739671-1	1.42974063118093	0	1.51716922814017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102807803-1	6.26296955932763	0.00264878873796116	0.877240661754352	0.00301945504060878	0.997590827101842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70086729228753	2.7420114413225
Merged-chrX-160604464-1	1.47658794099759	0	1.73643111021547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-48435870-2	6.38232325037748	0.732916805556924	0.604747840272854	1.21193786359988	0.225536166850777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66613800347615	3.10384060363691
Merged-chr10-29445625-1	1.7143456049505	0	1.5228725624162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75976885-1	1.21465503409457	0	1.56664642339883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-67106610-1	1.38553695453016	-1.3009742968257	1.55004410412006	-0.839314373937928	0.401292919257432	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.376242425970964
Merged-chr5-148809695-1	4.67198642629621	-1.56472992935022	1.12103221675683	-1.39579389955181	0.162776567966658	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.94785502978191	1.7877231627864
Merged-chr7-73648183-1	2.12867297717586	0	1.48169070193011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68373120-1	1.71321619919762	0	1.45789112698506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-97956300-2	3.40401035384431	0	1.42892333550858	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68257888-1	4.02095612356353	0.762846431479495	0.999399444099602	0.763304838704181	0.445281617047036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	2.12597045106784
Merged-chr15-63555110-1	1.94719108321093	-0.0356087207175199	1.56753370428648	-0.0227163987735296	0.981876494881439	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.55634759613363
Merged-chr14-7850949-1	2.41392125837176	0	1.42702051725602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32932753-2	3.41305971703599	0	1.39521749433423	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117839616-2	2.23438564504286	0	1.45944731536985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140536816-2	3.2055490155572	0	1.38509796450712	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-4048037-1	2.65335055201825	0	1.38925587551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-47439532-1	1.54318716616407	0	1.60034237171598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58599276-1	2.27218880306765	0	1.42010255789249	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-98614196-1	2.5917134185855	0	1.41837667334862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118283378-1	1.46933917290653	0	1.53647031195495	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67496605-1	3.97732681689094	1.03221448324495	1.2668086027121	0.814814867088128	0.41517828957374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.948404007588321
Merged-chr7-27402885-1	1.83683531073815	0	1.4476183871439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167250863-1	2.41551915413615	0	1.45721638967716	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29853939-1	2.2036633797835	0	1.43084861721167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-43987646-2	2.18992384544344	0	1.43655989295581	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17315559-1	3.46490614773688	2.58240672173282	1.02296760737029	2.52442668089103	0.0115887176033271	0.222204973615259	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41293295987929	3.82671795117445
Merged-chr9-63037635-1	1.31854599164242	0	2.04455009530934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133922680-1	3.06161049230999	-0.580301015272799	1.14568068269909	-0.506512001149987	0.61249726692853	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76406665166042	1.45906058849386
Merged-chr6-86806637-1	4.97075337370873	-0.139251684150887	0.919491556512923	-0.151444222803942	0.879625306975413	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01259914296816	1.41478649953382
Merged-chr15-73643028-1	1.95062234374165	0	1.47103650168492	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-139067387-1	2.13219409214478	0	1.45538850351949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66143870-1	1.49853198823454	0	1.46127058637816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124291505-1	5.10623418130584	-0.725552897549425	0.72839333505234	-0.996100407065489	0.319201362115444	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5388322769015	2.87934406150668
Merged-chr4-115986928-1	4.30688354275858	0.2891575616336	0.878733709843834	0.329061646770087	0.742109092772623	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7266942667982	3.53388619098102
Merged-chr2-59137487-1	1.67325163620478	0	1.48257771294845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4068868-1	2.76321903372383	0	1.37960765495162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52633225-1	2.2953560987981	0	1.41135642518059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144730518-1	1.73079230835458	0	1.47941536918665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-116907406-1	1.95325987554909	0	1.4703963290092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76586700-1	4.63654585436912	0.157619492266209	0.777486408100787	0.202729579094811	0.839346402440955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.61764137552359	3.72576965445344
Merged-chr1-127496942-1	4.61361255650872	0.843739420645166	0.933428023442206	0.903914816627966	0.366040571942634	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72189711188045	3.44081611712685
Merged-chrX-78518567-1	2.23793631492776	0	1.46180322909522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-96547449-1	2.5571939931611	1.17884923336906	1.23269695349723	0.956317146744463	0.338912029587874	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.40008246705937
Merged-chr12-26427948-1	2.58958403876973	-0.287098955448987	1.14710503442267	-0.250281314120012	0.802369805884812	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50690972966086	1.87417694237651
Merged-chr4-100028873-1	2.06131096729192	0	1.48317073046375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183637142-1	1.80082499852232	0	1.42908844215264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-111886783-1	2.66617409724879	0	1.42562317438797	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81917809-1	2.23729296854293	0	1.41134279130674	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-92787523-1	1.11028695995212	-2.69137147278345	1.65642247039865	-1.62480980600059	0.104203090972022	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0
Merged-chr13-12423407-1	1.46679589712494	0	1.49020156928221	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74682738-1	4.54275876240919	0.889500795418478	0.797443607673245	1.11544037328713	0.264661756649067	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.87613034754277	3.56224055876094
Merged-chr3-31424883-1	0.814324959552096	0	1.8404374396548	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-149342914-1	1.63656443240175	0	1.52500909162034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135099614-1	3.75394687879133	0.919983189726329	1.14751180910245	0.801720019287571	0.422714932861066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94340037943601	3.09702769537446
Merged-chr10-120364327-1	2.27035623468206	0	1.43439962529466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103687385-1	2.55119265239693	0	1.43956760408073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103856008-1	3.94220128597648	0.579326535072495	1.08972845273597	0.53162467550332	0.594985971015085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19361279780801	2.63021724508202
Merged-chr9-32582245-1	1.7009109415994	0	1.56995981783614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-107167918-1	1.98255499962806	0	1.42788718138324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-99088361-1	1.08447570176693	0	1.53434026300231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47767702-1	2.90767576575845	0	1.39330545940773	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-36710529-1	3.42006126550616	0.107299410276602	0.813623356118094	0.131878478499612	0.895080411600736	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58707500045288	2.2188304655635
Merged-chr5-100706734-1	2.4251009909881	0	1.46371233100431	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8701588-1	2.04562583859892	0	1.61049664984822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25525244-1	3.32755228976864	-0.101151507369934	1.17474135176248	-0.0861053432895457	0.931382676071933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.91919773928489	2.3840174190015
Merged-chr11-58790901-1	3.00988948843005	-0.945472294524608	1.27511259093293	-0.741481419952775	0.458401593307824	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04220233489076	0.55634759613363
Merged-chr4-44911167-1	1.48733225860558	0	1.59696515424323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142865615-1	0.900327293642729	0	2.03361305452443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55618992-1	0.650082229256413	0	1.82865728145866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-44075766-1	2.88493417246304	0	1.41408576402061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52615595-1	3.16127608662945	0	1.42104892667474	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-101265427-1	2.34849155358713	0	1.40820018009302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110072057-1	1.74243146489482	0	1.49964541179262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-8720170-1	2.88181468241645	3.05110598325298	1.40296020734278	2.17476302412867	0.0296478792883285	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.53935718689701
Merged-chr17-10772448-1	2.47146092040489	0	1.40253567924213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50134081-1	6.21839760738174	0.753188996654549	0.736005308508429	1.02334723397708	0.306143698323998	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60946488036042	3.95945937202504
Merged-chr8-83257829-1	3.95668562937154	-0.859975913928617	1.00244685745516	-0.857876811656407	0.390960489694987	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48626511518304	1.61141823534019
Merged-chr2-164928446-1	4.38054138698406	-0.6243702202534	0.879272696338254	-0.710098497148382	0.477643058208014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.62267797289389
Merged-chr17-34578236-1	1.86630528279909	0	1.42070755935335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84598377-1	1.91693709510268	-0.702908735928065	1.58753221033953	-0.442768172733788	0.657933426551321	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.376242425970964
Merged-chr10-81518690-1	2.04798185705647	0	1.41547737985542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-118898268-1	3.44848375556513	-1.25191913275082	1.08221738525963	-1.15680929709928	0.247350282571285	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97815176992225	0.990919527803163
Merged-chr16-92732635-1	2.03028030438428	0	1.44316078990701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34857454-1	2.1714415280753	1.11516175648471	1.49885899430903	0.74400711522487	0.45687217054536	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.54998568242928
Merged-chr12-35262602-1	2.14133220467782	4.12995958184289	1.40927455389259	2.93055712276605	0.00338354779504297	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.55923665963412
Merged-chr15-21692266-1	3.63398388515569	1.21466933723662	0.982472298945525	1.23633952686534	0.216332384369842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.46523198860284	3.91218346754085
Merged-chr11-88951077-1	3.69318675445621	0.736104860208248	1.16744873485084	0.630524354718064	0.528351573466012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95563186934823	3.1093367867945
Merged-chr9-21454782-1	2.2013203000161	0	1.43315692474734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142967462-1	2.14281459506633	0	1.41464378673646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105927216-1	1.40365224769175	0	1.55267460683867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-105836185-1	2.32843470949768	0	1.41218249143627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13166705-1	2.01825338718032	0	1.47872206292964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15999713-1	1.6161622700996	0	1.49526769034508	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8437454-1	3.27117563040509	0.591585005528573	0.970580780258375	0.609516505541238	0.542182135713726	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16286647593625	2.93077615073197
Merged-chr9-116112683-1	2.8038413245068	-1.71809829623402	1.37608768462543	-1.24853838562016	0.211833960245198	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0.465515277017237
Merged-chr11-16619273-1	1.55334335094845	-2.72647087574368	1.66254702486083	-1.63993609502379	0.101018454907151	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	0
Merged-chr6-32400730-1	3.34844412674124	-1.68584198781637	1.24998414281242	-1.34869069940622	0.177436334113896	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30166531184945	1.45451904642141
Merged-chr7-125586726-1	2.77515221826806	3.50875779366294	1.39618820514446	2.51309800550843	0.0119676083092777	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.71483396990367
Merged-chr15-3338699-1	1.51250716186956	0	1.76447639206964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75687558-1	1.88559631600129	0	1.47936356275418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121477428-2	3.57475594112336	0	1.37788079102662	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59342062-2	2.6253595204894	0	1.47108129571701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-6480562-1	1.5798305785196	1.28157260907532	1.61268770752651	0.79468120398893	0.426798968654615	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr9-70841567-1	3.03378278053733	-1.89311464756814	1.33614955827145	-1.41684337344484	0.156528725428917	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr4-95843032-1	1.27261931947199	0	1.63967049812335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88175437-1	2.00210030296096	-1.02328702144211	1.44333794913784	-0.708972574339474	0.478341496293742	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	0.577068348605183
Merged-chr10-122528434-1	1.3208914346608	0	1.52259396595413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129065737-1	2.27825717320828	0	1.45933514989128	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-77061614-1	1.82799557678274	0	1.40921460220163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52472071-1	3.88508570258535	0	1.43619722137142	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59282618-1	1.95691530938996	0	1.49024354926966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-21271399-1	2.58321178236446	-1.29972507881638	1.34019475506509	-0.969803137868017	0.332144628470036	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43250738636416	1.56277881816808
Merged-chr12-34777168-1	2.05526481586149	-2.31200522801463	1.4513847244443	-1.59296511054285	0.111168018181808	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	0
Merged-chr3-59201589-1	1.36674165204503	0	1.51519288462507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31400537-1	1.1900289585254	0	1.5969642274225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101599508-1	2.14538283731267	0	1.54042395848896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21514892-1	2.34236510994694	0	1.47590650407933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70117336-1	2.32191968348331	-0.0434619420113952	1.50009313753617	-0.0289728290356552	0.97688626078264	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.723581231604105
Merged-chr6-115524634-1	1.39008882608311	0	1.45994298351156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-150834066-1	0.789538269936338	0	1.95417085065331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115184147-1	4.14818495540202	-0.203137921351836	1.04142350971512	-0.195057937003366	0.845347591426404	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.71691836698322	2.43245228691853
Merged-chr10-69308089-1	2.46731147979813	0	1.42745749789722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55210281-1	2.21461017137125	0	1.42813549347259	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122474308-2	1.89037838567304	0	1.56634422774661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-44780846-1	2.82294835574601	0	1.37894155765895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-54758158-2	3.10533166756489	0	1.37689191860909	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23917069-2	6.21093936563214	0.622093269391237	0.818170367917089	0.760346859022738	0.447047279023619	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99521245973132	2.83279938010673
Merged-chr8-125176522-2	5.20671915158182	-1.97595597625568	0.859073288581945	-2.30010175210703	0.0214424560463095	0.336292691350645	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72825486667633	1.46665878981685
Merged-chr9-121458591-2	2.44139746343979	0	1.43524640609479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-137397520-1	1.89951822302264	0	1.55766742790954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145928340-1	2.19739090764248	0	1.43814255274263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157416001-1	4.17629145630879	-0.448015775768388	1.07696115890135	-0.415999938405789	0.677410048287123	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.900948542443349	1.06702908365212
Merged-chr2-52942995-1	2.10269048041406	0	1.42775688806947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21425936-1	2.0434769088846	0	1.60248204822022	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-37395842-2	2.53227222407089	0	1.42404239108651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115306368-1	4.61086807220415	1.71253167249806	0.990611974044017	1.72876132872382	0.0838518199695285	0.817304485702221	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34805514843284	2.80834058676988
Merged-chr2-172477028-1	1.09292884467006	0	1.59876940008564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59622778-1	2.5110103018832	0	1.39069772676738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-72955764-2	2.60162448767559	0	1.45323682483406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37600979-1	1.56022330410409	0	1.49257959831268	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53204895-2	2.07612372815884	0	1.47656383283121	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112767650-1	3.78649834926199	1.03843619390079	1.18961504428664	0.872917839168293	0.382707862068056	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31345086927531	2.00105898665567
Merged-chr7-33982498-1	1.85095560836796	0	1.47329915603006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112397679-2	2.51525939920023	0	1.42395258218036	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-4098499-1	2.78936533664683	-0.694691117195106	1.4716999360916	-0.47203312316504	0.636903146189188	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.679405493272835
Merged-chr13-54983990-1	2.62398233628942	1.66633228187747	1.29496479515628	1.28677805613732	0.198171657546133	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.7258799784184
Merged-chr14-105198684-1	2.9947662948255	0	1.40188056018659	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79568643-2	2.25143681222238	0	1.41405693351379	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24920557-1	1.83926723123256	0	1.48195101135518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-83384266-1	3.38467644200781	-0.250286455578969	0.941821110712049	-0.265747340691635	0.790433801247508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	1.34263109599227
Merged-chr13-20185684-1	2.1876196041382	0	1.44094530577458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105701029-1	2.68033657473084	0	1.44584890904534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50581379-1	5.72320071786126	0.00193630223662076	0.92111993437521	0.00210211739466277	0.998322754221066	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39268946214402	2.61229786651188
Merged-chr19-31756221-1	1.24703764795251	0	1.69738084337786	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117970847-1	1.25154495813929	0	1.70306036493677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26461596-1	5.34944445544302	-0.200971065083124	0.848067756841236	-0.23697524574177	0.812675994373085	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04227591496094	2.10257130558249
Merged-chr5-120522871-1	1.74413125257114	0	1.45994181780551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-52971253-1	1.50944093395656	0	1.47103707137014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-112775011-1	1.03254356308223	0	1.88148687062979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8747409-1	1.76698416003435	0	1.47692341262905	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-18588476-1	3.30924877990249	0.501576010765157	1.06747591267242	0.469871033913508	0.63844716026178	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	1.90216338684418
Merged-chr1-23897423-1	2.55207169914605	-0.661038138094676	1.29127720716387	-0.511925816104635	0.608702929496423	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.577068348605183
Merged-chr3-81135973-1	1.75897595152585	0	1.55485485321371	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-111171410-1	2.10010002565428	0	1.47801297325658	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-88982476-1	1.62918235510849	0.9331423345147	2.07149699114912	0.450467627277149	0.652373291579298	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76302217368042	1.94177129634429
Merged-chr13-63702905-2	3.90431313940841	0.472461407536956	1.07818722097001	0.438199784182102	0.661241465023253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.74294609266651
Merged-chr13-54593829-1	2.24376646310884	0	1.46328453032262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-79595069-1	1.48130830493215	0	1.54687043425465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55085144-1	1.88073219529574	0	1.42952873049002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85658524-1	5.7009937245772	-0.740368991704859	0.851083381132201	-0.869913580876108	0.384347633071403	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94434536189135	2.76468004867007
Merged-chr2-146623426-1	1.42586336807211	4.19970092562443	1.99132641160341	2.10899674767174	0.0349448623642128	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.90422170799422
Merged-chr10-68072114-1	3.80069952637606	-0.625398889873459	1.08900975189792	-0.574282175879068	0.565776868726204	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59982791176663	0.97908007631626
Merged-chr17-4778373-1	2.92704503512061	0	1.41048109767346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137967664-1	2.67510790785008	0.18214236918337	1.33476275405618	0.136460482306584	0.891457262813543	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70769829698481	2.65150288644981
Merged-chr9-110897036-1	3.73624780954072	-1.42019910643589	0.959573756505753	-1.48003120844768	0.138864918241601	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20769124048265	2.12705403103447
Merged-chr3-144242262-1	2.90392833961668	0	1.39574697772303	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83398237-1	1.40906612173141	0	1.63640332773688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67105182-1	1.54580114292278	0	1.53485487437029	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-186610139-1	0.865104714205914	0	2.00003575741385	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44124046-1	1.45674694881642	0	1.56140741798887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34299696-1	1.24170549174653	0	1.48320195677831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72146550-1	2.5268081907836	-0.863738723025895	1.1231654691205	-0.769021793113216	0.441880373243715	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	1.02674429890598
Merged-chr7-108944113-1	1.78194778829509	0	1.47612962425426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91509192-1	1.57971702986166	0	1.662839301973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157099680-1	2.36421408117229	0	1.46113064072122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-95270583-1	1.6577803414276	0	1.48819233848127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35584463-1	4.95996098250955	1.32954110967728	0.834404950397077	1.59340031365416	0.111070415406643	0.970321372626234	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87822650685341	3.1274403975258
Merged-chr10-78493682-1	1.75245880476793	0	1.41500544404628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-38484013-1	1.67846485424476	-1.82670272328679	1.48418195772502	-1.23078084447731	0.218404841769475	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96490577938442	1.15786140276852
Merged-chr7-110394144-2	3.23103850789868	0	1.393561539428	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-10268563-1	2.44142456385605	0	1.43910047366021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54080476-1	1.75811952027812	0	1.47117578914711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-73548817-1	1.47498349013012	0	1.45363864666239	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25112315-1	4.41491156578549	1.36593925810082	0.950537743040367	1.43701738105818	0.150713054893522	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.80266505334835
Merged-chr2-18916124-1	1.68187686019414	0	1.56608542041541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160673657-1	2.37240719406785	0	1.43084757330663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76734854-1	2.73355239382416	0.0835968368430151	1.48356288742733	0.0563486978216216	0.95506402518039	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79795952835561	1.61881475415901
Merged-chr11-54879052-1	2.59303017950189	0	1.51461968301997	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-65888339-1	1.13146878753903	0	1.81543195064322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-85117920-1	2.4214184521984	0	1.39030604268819	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-52460547-1	5.79723454685095	0.509471663890441	0.908160646123844	0.560992888279113	0.574802385320875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43204988179119	3.64105404136796
Merged-chr6-129095406-2	3.53026131945996	0	1.38792132935173	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115374312-1	2.16766688053679	0	1.44684940904563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119442304-1	1.42509185477382	0	1.57664532869614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127979065-1	2.89692917759136	-1.2721338320266	1.14742090057547	-1.10868978540359	0.267564029934299	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33937007872476	0.838451940269823
Merged-chr1-88697515-1	1.54156819415575	0	1.4976206976676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65119629-1	3.05828608085613	0	1.39872313348618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18949343-1	1.50326384630592	0	1.58387131101134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81204803-2	2.58906068269293	0	1.46400022032784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62013688-1	2.02468582369254	0	1.47107857336838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-121970157-1	3.20528142231998	-1.11862199727437	0.881250834004413	-1.26935709347512	0.204313731891411	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1491193207941	1.55002395216531
Merged-chr7-121080153-1	1.30536562246634	0	1.49458868385882	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46574685-1	1.29510263606091	0	1.79435865452761	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-12536440-1	1.44996256634376	0	1.63963421502205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112796021-1	1.62286458405662	0	1.54329183795512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-5447726-1	1.90936350779743	0	1.44128057058986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55747513-2	4.60489684094871	-2.42839902346454	1.27730185395694	-1.901194315143	0.0572765654402998	0.647296636334564	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	0
Merged-chr2-128436392-1	1.44522629590972	0	1.49473095415994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67167569-1	3.48335810241694	-0.0491755847885111	0.87512579949371	-0.0561925894733772	0.955188384580315	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93112180545279	2.02497645810754
Merged-chr18-36713103-1	6.97987785534481	-0.0185495138352687	0.658871479253963	-0.028153463033902	0.977539753615288	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3719626198815	2.7986741421031
Merged-chr4-94900915-1	5.78551109846425	-0.877529800209416	0.652751663151748	-1.3443547519624	0.178833698250029	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.14371900439321	2.78597213134036
Merged-chr2-72221453-1	3.28055297795667	1.54171424019811	1.26104712174222	1.22256671746582	0.221493390339326	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02748994520012
Merged-chr16-70700276-1	2.2518565766691	0.362847553199238	1.47953409242298	0.245244469226806	0.806267146015673	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.805218875278971	0.878778741524029
Merged-chr14-73241495-1	1.83010459783086	0	1.52859634141866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-120236597-1	2.34379222795669	0	1.4382352081576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-45970384-1	2.39002144697723	0	1.4167923794264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-84145578-2	3.52043201658683	0	1.37022156149144	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-21621111-1	2.46764422406955	0	1.41820457178972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-16438684-1	1.76280548005636	0	1.46252417184592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-105978825-1	4.20853963417285	0.293123620476556	0.712644438924559	0.411318189641533	0.680839233505968	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	2.40938238731737
Merged-chr1-136139482-2	3.87823455880603	0	1.41820400268577	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-55841503-1	1.68385148661766	0	1.48630430197047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-130492227-1	6.73676151160921	-0.568582847139162	0.72502269721773	-0.784227651521938	0.432906542742798	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93295256676719	2.02173749792077
Merged-chr1-59315205-1	3.88852763192665	-3.37961109163641	1.18503668650494	-2.85190419007533	0.00434581971171068	0.111326302407578	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91790730682473	0.376242425970964
Merged-chr17-83025468-2	2.05920224955673	0	1.47730603421529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-131982796-2	3.61762072437121	0	1.3936885435953	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-70894440-1	1.99010243554579	0	1.48960119572616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50106573-1	1.74520240881372	-1.71366171891421	1.61880354832496	-1.0585977036481	0.289783033167556	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.303163067301871
Merged-chr10-42958335-1	2.47300858062811	0	1.4304141334946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3839064-1	1.75350700319379	0	1.56960382003181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107412207-1	3.1587105190268	-0.977805320876521	1.47422734725608	-0.663266301969278	0.507160014610652	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38099347700105	0.948471875794396
Merged-chr9-31221226-1	3.07821053529211	0	1.41446846740445	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143567942-1	1.90056175330991	0	1.45012481476789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43057918-1	4.46136279679508	-2.16458718868476	0.831589213821431	-2.60295245862768	0.00924247691523108	0.190235442118533	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75201798978952	1.33245162145219
Merged-chr8-99839054-1	3.51931108423447	-2.94257933167689	1.38987125262129	-2.1171596477927	0.0342463007915596	0.461940513330008	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37225955669785	1.08976818821237
Merged-chr15-81086903-1	3.58930686269225	0.540804561893337	0.881532501605186	0.613482271962275	0.539557501290821	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	2.08695703474815
Merged-chr2-101896018-1	0.9457115400521	0	1.78021105437688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118608140-1	4.75915349459218	-0.727338643032001	0.826352274534601	-0.880179876604848	0.378761873082586	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.004925761231	2.97076722193977
Merged-chr1-177179833-1	2.86836591017206	0	1.37733373234278	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-41818936-1	2.546034860202	0	1.41520238733129	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-85805160-1	2.19340066383969	-1.77700445568769	1.38972975258026	-1.27866907388892	0.201013614577146	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.892489746801999	0
Merged-chr4-99210012-1	5.1196529414896	0.593487096259339	0.77011971294316	0.770642649817669	0.440918773885358	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43960369102427	4.01176494183296
Merged-chr1-138160501-1	2.2592743550541	0	1.45364124037358	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32382383-1	1.91727604856318	0	1.50428109811672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53028442-1	1.76426649360029	0	1.54848060902904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40708824-1	1.72607517215466	0	1.45196334085342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96953493-1	1.36801903163943	0	1.54198176175795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-81915762-1	2.71801296365802	0	1.38787187142896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67891987-1	2.74688038396441	1.82740131719886	1.31859056037114	1.38587471510831	0.165785162831345	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr6-116181007-1	1.65445814843106	0	1.44180879104874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67770911-1	4.53028892882663	0.814342866289999	1.06737296428254	0.762941252533392	0.445498432507933	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.30064958020929
Merged-chrX-7313752-1	2.08161880960842	0	1.50481865180802	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51466341-1	1.68435950356753	0	1.58431267521961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30216887-1	2.20082450294708	0	1.41978095261159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-6357743-1	2.25011698355365	0	1.45294874715992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100497098-1	1.11974924239873	0	1.7039543708755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68127494-1	1.74108701208969	0	1.48264786998776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-24521165-1	1.67968002617845	1.18464665984685	1.44970948623637	0.817161418266181	0.413836187746919	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr19-22572540-1	3.12448595758461	-0.985548386531753	1.88477383232232	-0.522900079378443	0.601043789369536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.72103481781833	2.14038034075193
Merged-chr5-122952373-1	1.88706509292606	0	1.52425394253853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69491454-1	3.51291215856467	-1.10933174000465	1.42897831125504	-0.776311110719623	0.437565314375858	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0.376242425970964
Merged-chr3-65923359-1	2.44124751302859	0.943034882208322	1.41042873658265	0.668615760405744	0.503740616364334	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.39284430389808
Merged-chr16-29438314-1	3.21698805143959	-1.16890385607686	1.33264666467918	-0.877129615116893	0.380416240645308	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73893482823591	2.00836863046658
Merged-chr17-7396225-1	2.39772241562498	0	1.43287243164676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62542616-1	2.04562978588158	0	1.43264578397211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-117311172-1	1.22271967440871	0	1.66868442382929	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70148195-1	1.07603868857509	0	1.56876340470218	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3518051-1	1.89444005914054	-3.56231597347279	1.33268069865918	-2.67304537167595	0.00751660833720045	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	0
Merged-chr2-166270185-1	1.65563053451923	0	1.62675230455211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-24479021-1	2.89502861919573	0	1.4392354253678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-54659139-1	1.79205601950604	0	1.67490916724953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10520588-2	2.70809973520543	0	1.47271018481047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34898048-1	1.58390252119167	0	1.62299330363727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-25266475-1	2.50428625115036	0	1.51165186046155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-84444852-1	1.4359976182164	0	1.59977084649373	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13830235-1	3.74102509144602	1.33306762546763	1.09981686055929	1.21208145944383	0.225481200145008	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	2.61485233109839
Merged-chr13-6690224-1	2.06577442774974	0	1.41659847990084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165367180-1	5.30383854341152	0.627102994124887	0.687195928722973	0.912553418775694	0.361477462539253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54911206455162	2.73504674720227
Merged-chrX-37074723-1	1.84704888392886	0	1.52652793014001	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-3004062-2	5.6199804242698	0.426160251734015	0.641109578053588	0.664722952709332	0.506227710340881	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.49247014348464	4.0831112861597
Merged-chr6-117277081-1	1.90179522365634	0	1.58217738892876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-64899239-1	2.65581944862004	0	1.38912947950952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75601088-1	7.30077569054417	0.998051384029357	0.64218780851138	1.55414252777997	0.120150422873781	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.56574940097612	4.56960724090107
Merged-chr16-65467246-1	3.0317259510223	0.88478799633239	1.37111809429831	0.645304004091052	0.518730198411272	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.815775955292901
Merged-chr7-110631291-1	1.58251171605413	0	1.46085510784153	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-34615307-1	2.38297616530802	0	1.41250339361809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131741596-1	3.85655587554403	-1.46487697849982	1.32012913023066	-1.10964673451594	0.267151284196004	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.02488303352725	1.6454950719498
Merged-chr5-136936510-1	3.56400425072307	0.811752702623952	0.853939777738131	0.950597130835243	0.341808925684731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69969229296561	2.09906462022006
Merged-chr6-49208488-2	2.30725952953108	0	1.46802122159861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114840074-1	1.4138866888487	0	1.46026005754307	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33988393-1	4.26832763767989	0.361454939738271	1.14095482724896	0.316800394814755	0.751395064610044	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40587561760828	2.8180742070208
Merged-chr19-45037056-1	2.07557159746423	0	1.42236725129273	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43378170-1	1.81085812429939	0	1.45970613395602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31665093-1	2.21205550378816	0	1.46583226731428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-97977582-1	2.76269225845585	-2.1119330476157	1.3002774572225	-1.62421722831906	0.104329455215788	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chrX-78523281-1	1.85742025047088	0	1.43980303881314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93819947-1	7.68277796348192	-0.200696138994443	0.698827004032728	-0.287190016751333	0.773966829979139	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81888951683988	3.1203134551996
Merged-chr2-14210885-1	1.40122869215038	0	1.69913078320053	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-69193270-1	1.42758771117777	0	1.51827251493018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41288941-1	4.81747529434498	-0.0570328512128471	1.04760489938469	-0.0544411841204114	0.956583667305955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.63900399389441	2.01588580413136
Merged-chr11-121679959-1	2.46653336267377	0	1.39459751944586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-29849006-1	2.32285278359393	-1.82642367765994	2.00591438040247	-0.910519260195682	0.362548729076657	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3916856522559	1.49440988531003
Merged-chr12-3725178-1	1.93619317310648	0	1.4185202624245	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45089259-1	2.42406435965811	0	1.42622323240387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117536497-1	4.46195954482106	0.831708410245315	0.980695126825471	0.848080496675426	0.396393142487504	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65199033198162	2.47175683101492
Merged-chr4-150965330-1	2.36834358077868	0	1.4287777048816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68885339-1	4.2745922151599	-2.29919974007051	1.06846912361207	-2.15186353003616	0.0314081043888245	0.436617608739689	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75165205936934	1.06702908365212
Merged-chr9-21100592-1	1.59107016431432	0	1.50884264267844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-56301135-1	4.28600485569882	0	1.3955572910998	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124617672-1	2.62907788971556	-3.2591727376652	1.2285490277837	-2.65286338921673	0.00798121656643511	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02938698498506	0
Merged-chr8-3309690-1	3.3406398523874	0	1.40527489739283	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-177398317-1	2.03735107927366	0	1.4513923784143	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-156956690-1	4.10651979700969	2.66122653572967	1.10066572984224	2.41783355616161	0.0156132167657669	0.274064220491497	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	2.79749557103482
Merged-chr15-27706817-1	3.01201966950394	0	1.41621684806828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35687376-1	4.14235577238848	1.0199565097544	1.17513353280127	0.867949455346613	0.385422003389666	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41083941945204	1.68580115571326
Merged-chr18-74870124-1	3.66950646171937	3.03222885551124	1.29625808339515	2.33921693091336	0.0193242092772895	0.312970665370429	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.36232305499238
Merged-chr19-21280021-1	2.72843192197411	-0.0331021602675844	0.958249776011994	-0.03454439656156	0.972443040120712	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72774128397143	1.7079953405313
Merged-chr2-117376960-1	3.29068295251071	0.470090453648999	1.03046117397702	0.45619424149161	0.648250305974556	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	1.97194432603249
Merged-chr9-37590505-1	1.30517591461227	0	1.56467367551205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56565338-1	2.19673875211965	0	1.45305980700587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35541059-1	3.79449356044324	0.365905075003642	1.01532351218365	0.360382745610504	0.718560928003509	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15718255140544	3.18499839297128
Merged-chr3-89798725-1	2.07499001199174	0	1.53650824804111	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55177489-2	2.51012999686139	0	1.38535863890167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55736584-2	2.34200203375821	0	1.40582855029227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-24598453-1	5.44121988741131	1.53390440012375	0.732076850955953	2.09527783609161	0.0361463015383152	0.476218324120523	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44575596919856	4.36931278722603
Merged-chr9-118726722-3	4.87216963149092	3.18624106246745	1.12804308182528	2.82457391371242	0.00473435272836233	0.118484350014654	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	2.69685223506132
Merged-chrX-71086144-1	2.75027616335455	0	1.43476528430298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35026966-2	2.02729410027608	-0.0326813243054771	1.44830206447032	-0.0225652680523034	0.98199704884807	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.465515277017237
Merged-chr2-155787121-2	6.87958460402167	-0.10322059518619	0.662951313066525	-0.155698605842918	0.876270596144797	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63489024549046	3.16532119470734
Merged-chr12-12256204-1	5.63003370190009	-0.23737639107107	0.953530695782178	-0.24894467699999	0.803403575664882	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56104072393284	1.33175291456033
Merged-chr7-35092662-1	2.10441331519198	0	1.41222872165388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76613749-1	2.97374630738616	0.381603159126071	1.17891127000017	0.323691162207665	0.746171862477919	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	1.30064958020929
Merged-chr17-7400127-2	5.47289000867042	1.75365541312787	0.833042765598265	2.10512051187246	0.0352808191617757	0.470748661957527	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8789122704428	3.54464768968701
Merged-chr19-40727968-1	5.58713551361757	-0.834163494499917	0.659969703811903	-1.26394210170845	0.206250808907684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.27979026553152	3.41970898870643
Merged-chr13-120321029-1	1.64852154771043	0	1.43724607831306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120531086-2	4.47490381012584	0.553256601837513	0.904482910951839	0.611682758334581	0.540747671483173	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.41437199749648
Merged-chr4-149339948-1	2.81292745305851	-0.355978979105328	1.15052565204234	-0.309405512578896	0.757013077559153	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.97908007631626
Merged-chr1-62697108-1	3.39256658323976	0	1.39589389654097	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56737526-1	1.7329759430784	0	1.57659066348136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111455309-1	2.0276399657353	0	1.51006959110338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58567626-1	2.33131970080707	0	1.41930736175554	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136462043-1	6.19168434817111	0.59818300727049	0.716380582267734	0.835007288132958	0.403713604881304	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3137690657033	3.66238452184401
Merged-chr10-117571453-1	3.79780028513273	-1.31664010248763	1.02867733116363	-1.2799349831091	0.200568002966753	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98733255708278	1.06702908365212
Merged-chr18-40895256-1	2.52132525722812	0.274465173396529	1.93095510780723	0.142139593140624	0.88696974485142	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.98465223817743	2.79350126489132
Merged-chr4-53092690-1	0.799812337538342	0	1.91124241683389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-81783071-1	1.01380286375089	0	1.62571139915631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17214985-1	1.81751827137825	2.03107141504979	2.31478774472444	0.877433112249165	0.38025143456489	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.08815580974227
Merged-chr18-61092652-1	2.81464829963957	0	1.41112212746961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149785476-1	1.62964578442896	0	1.54080470327944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155272697-1	4.16392549511789	1.19117036463361	1.22943655784073	0.968875015987548	0.3326075523262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17585887006086	3.26148621653491
Merged-chr11-115272446-1	3.49269856577011	-0.996970231683837	1.19083677100573	-0.837201416649098	0.402479361322704	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83977088234384	1.99710100584055
Merged-chr15-78859588-1	6.14882792519049	1.39291284003886	0.716615677714469	1.94373760351062	0.051927101549763	0.605100388982881	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47679065818919	4.29855269685794
Merged-chr14-46183144-1	1.72059579466796	1.09636310926677	1.70784369861633	0.64195752231602	0.520900763779409	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	2.03009722200694
Merged-chr4-106300934-1	1.33499164842285	0	1.51180494584163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17548962-1	1.55407402488991	0	1.58309166446387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-52119381-1	2.63474953359227	0	1.42592299608959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32775017-1	1.41661790297612	0	1.54851972651992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-37158187-1	1.47478362409822	0	2.36987392926998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-96519402-1	2.46342704975999	0	1.42145199650205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-18070868-1	1.99771999981481	0	1.43835668819502	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-33962237-1	2.25246896994769	0	1.43712864580434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126629296-1	2.6697402167933	1.84251262572978	1.21985276938999	1.51043853157063	0.1309315629184	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.11893902259477
Merged-chr2-48609950-1	1.52449468879078	0	1.75706846585646	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-116630420-1	4.82516515866544	-0.134596525041765	0.988351947509392	-0.136182789320082	0.891676780540161	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75857160280443	3.51031627606358
Merged-chr1-153300504-1	1.71580908267356	0	2.26057585089814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102713086-1	2.63661539337195	2.91943056221311	1.56659182266614	1.86355534350014	0.0623841737561248	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	2.4923630101438
Merged-chr11-85183125-1	1.37555154928682	0	1.58953646592141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112354728-1	3.2246210174166	-1.44132578728795	1.20689244226276	-1.19424543299456	0.23238197574242	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29226631604904	1.36232305499238
Merged-chr2-45754418-2	1.7026405112005	0	1.51473691216704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170705412-1	1.27051561336367	0	1.82793532552681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110928383-1	1.11842686126369	0	1.56924302665284	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-61766921-1	3.86604639693494	0.441212926499957	1.07786063057066	0.409341350807443	0.682289173645069	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79586598792836	1.15589752119199
Merged-chr8-34485133-1	1.53935463746416	0.615765904480768	1.45525882502965	0.423131537764922	0.672199293488352	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.413263464506793
Merged-chr2-78988379-1	2.31514781764473	0	1.41334191776405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34839895-1	1.20380435348296	0	1.61845744234066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91794507-1	1.58548642107201	0	1.56475599438486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119935666-1	1.3926821632847	0	1.47120063624807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-43398880-1	3.88278118924654	0.169149148248671	1.28985793288764	0.131137812882999	0.895666289082668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.74723369056052	2.36498691267205
Merged-chr7-145114803-2	7.65333285433083	-0.376685575274569	0.613358105615425	-0.614136459314603	0.539125157341931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.29492926749591	2.95741208968871
Merged-chr1-51669165-1	3.78995599189274	-0.804838997719941	0.927088112980363	-0.868136465618763	0.385319630400206	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79867782631271	1.338064021838
Merged-chr2-165042389-1	2.40487613849309	-2.74355521379661	1.22122201258964	-2.24656547745877	0.0246678105506345	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9001726754443	0.376242425970964
Merged-chr1-43338738-1	1.64436864300672	0	1.65275028208408	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40682355-1	1.58354674550537	0	1.48433303920838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-77266036-1	1.76366576637673	0	1.47900940699833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162509892-1	3.7240177259613	2.10330643006697	1.25067287030446	1.68173986979901	0.092619293190764	0.866465987312787	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.40024388691264
Merged-chr7-135647668-1	2.16578961934423	0	1.52837604037919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-121224621-1	2.2607409336524	0	1.4190623890308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-147008369-2	6.80602644205715	-0.251616052981015	0.639312011611564	-0.393573166796516	0.693896195317752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5465999697838	2.81096007761579
Merged-chr18-46143613-1	2.92795545156063	1.84907791631145	1.36240159280866	1.35721943226701	0.174711498070177	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr13-83341590-1	1.98868467463225	0	1.48065855707411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56490134-1	3.35824536500926	-0.607017736381207	1.40053180916889	-0.433419457099961	0.664710067730089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.303163067301871
Merged-chr7-129398982-1	2.10799192915626	0	1.49966751144641	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-15027060-1	2.08536723009368	-1.52334396085792	1.24708964114833	-1.22151921609678	0.221889494465803	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.465515277017237
Merged-chr7-68302796-1	2.83853308117464	0	1.42074473840682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125759238-1	2.0903388556424	0	1.41086827568953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114372085-1	3.26501823747356	3.68566129854949	1.27323007348895	2.89473314783551	0.00379480982416472	0.10116825268846	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.228867794393
Merged-chr13-82937358-1	1.38260805017249	0	1.79092851636074	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-58062806-1	2.45478677231271	2.55683688586392	1.21898104050476	2.09751981442235	0.0359475850197013	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	3.37911896792117
Merged-chr13-44414787-1	3.70759343517168	-1.02073006218304	0.979101685358404	-1.04251690855725	0.297172090345746	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47926873502901	1.6655665839746
Merged-chr5-64752094-1	1.45271118279227	0	1.60291513030745	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33897320-1	2.7051395814411	3.90492169517377	1.27963467989358	3.05159101775714	0.00227632023489474	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.70303879967302
Merged-chr14-120216757-1	1.39555012218691	0	1.52335401998991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150595249-1	1.56394998500317	0	1.53887005760465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68240737-1	4.11138384322775	0	1.3682493977059	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3496271-1	2.727387742668	0	1.40878917947673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132939618-1	2.34035419687903	-0.647100547618792	1.09680878557087	-0.589984832481065	0.55520081825753	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65199033198162	1.28091929990772
Merged-chrX-36096206-1	1.65097841119236	0	1.47208354468657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42860482-2	3.01013661063156	0	1.40323407427854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148683687-1	2.30706023394044	0	1.49858999164828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-153959610-1	1.87518642541599	0	1.47758997448978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157472888-1	1.93291228471632	0.229643486892121	1.44239738397852	0.159209583602198	0.873503753548663	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	1.25298535761957
Merged-chr2-180347248-2	7.19189490441059	0.147422356099367	0.788989821653081	0.186849503065185	0.851778632509607	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.19090291045955	2.8507258943229
Merged-chr12-77100033-1	0.724125434033057	0	1.76377218090547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65505310-1	1.30569966038356	0	1.57738502427413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-29101062-1	2.66051872126862	0	1.40947124250557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-91278687-1	3.0171424765482	2.37893543390824	1.23761235981825	1.92219754031675	0.0545809062172898	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.75132748634479
Merged-chr3-139878644-1	2.36782992639414	1.19817375251888	1.42292300620623	0.842051008587897	0.399759402245994	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	2.22737092014164
Merged-chr2-79228787-1	1.614484410161	0	1.45427135143226	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-77128497-1	2.61192015360972	1.19654619400044	1.40956410882765	0.848876746014495	0.395949879594772	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr10-26862388-1	2.11475835526219	0	1.43794264010767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-44297651-1	4.30408645491829	-1.78979292356761	0.84132443942132	-2.12735163713855	0.0333908773158447	0.453834340749972	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8879781797114	1.27743081564928
Merged-chr6-31124962-1	1.85933319171716	0	1.45365223634607	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124898902-1	1.33954492986127	0	1.5983999344246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-101679558-1	4.08464285463101	0	1.45836661120321	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81976134-1	1.89687872620659	0	1.48883475949861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-89383217-1	3.5007021013783	0	1.42689823760505	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120661107-2	2.83868790867923	0	1.4256476339799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-126931906-1	5.3712888433018	0.304575739496197	0.818273135173628	0.372217694072981	0.709730773102005	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51324457365836	2.89892374609951
Merged-chr1-128725607-1	6.53200297371691	1.5236589933771	0.676984036163405	2.25065719719472	0.0244072577219784	0.368542811808061	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66828971316851	4.62269379965692
Merged-chr10-66774509-1	2.01186948402489	0	1.51565927958562	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54569184-1	1.99087060409185	0	1.41254601325297	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62233322-1	2.37746050753829	0	1.47422304827254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-26428519-1	1.29240554442095	0	1.45918376962281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-46525858-2	2.58206210957311	0	1.48290288469722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-7553764-2	2.53231547862806	0	1.51373172050055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123168984-2	6.55332083243324	-0.227208871928307	0.7344445253595	-0.309361516197689	0.757046541114717	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66258977942235	2.54444516623674
Merged-chr3-135607893-2	3.97794814223225	0	1.37983602873513	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64835350-2	4.52246889404117	-0.0354033328715996	1.41281354470425	-0.0250587439540797	0.980008107394823	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.303163067301871
Merged-chr18-61419793-2	3.41998710255212	0	1.38055394794525	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119127965-2	4.65267074664406	1.48711465369358	0.963554682154909	1.54336300911099	0.122742723525996	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	2.55278887686869
Merged-chr8-111313029-1	1.68960072721452	0	1.46202163486115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102993062-1	3.12249804966485	0	1.43276012584463	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23661482-2	4.66292780529437	-0.737516398094262	0.907855194099728	-0.812372284575204	0.416578044539046	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82986663084093	1.84638610234924
Merged-chr8-37033127-1	3.93294966705562	0.375536279422699	1.06795921393898	0.351639158613182	0.725108894112497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27416815045033	1.9285153451005
Merged-chr18-81566725-2	3.00037767700473	0	1.39114356278269	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39185855-2	7.56884151490224	1.53000607127844	0.736045640094531	2.0786836955952	0.0376464325392693	0.488639547851514	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31711242604998	3.80959111870843
Merged-chr19-40690749-1	4.41588771289869	0	1.41396630612605	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83517336-1	1.37700148874818	0	1.74105502693229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39240625-1	2.08450518276857	0	1.41030510925914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81703289-1	2.34325954099677	0	1.43289697126558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-101980393-1	1.52765197635228	0	1.60847881302403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36403386-1	1.82834502077457	0	1.42496431362909	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72950450-2	3.67721745786019	0	1.41715852138615	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-72491370-1	1.60439305166469	0	1.48069052251073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32410006-2	3.58307442132889	0.108577335457894	1.32295539553312	0.0820718036484819	0.934589614891788	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.953310774576147
Merged-chr5-140623491-1	1.43483119339468	0	1.55397696624263	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8339352-1	1.5931983076864	0	1.81898354292468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-70145171-1	1.9960944429081	0	1.46315161949713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88221320-1	2.74777810525902	0	1.43766821126999	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-139378428-1	1.84042056316998	2.09240311580737	2.02042878456072	1.0356232953107	0.300377919723947	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.02361125061813
Merged-chr4-102665194-1	1.14165894135891	0	1.56996416015755	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25151392-1	1.91894237535181	0	1.4163745132664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44923762-1	2.59157189191172	0	1.40666116140811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139086227-1	7.2387405722601	-0.0623789507880556	0.663146407268183	-0.0940651266513293	0.92505742241477	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.35822082392563	2.83178321694297
Merged-chr3-87581187-1	2.51843820203022	4.447528081138	1.42699845694347	3.11670139480338	0.00182886713956341	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.85498306541325
Merged-chr13-119617388-1	1.90949049933218	0	1.6623037699432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106150518-1	1.42971864970356	0	1.48870453727055	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117657543-1	2.58366839333795	0	1.43957523487589	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-16551151-1	2.80618098382602	0	1.43397294892611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91251730-1	1.60220360800304	0	1.52849701502941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-83973898-1	1.54463276662772	0	1.43846152127079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72280399-1	1.60865954043511	0	1.50214189692524	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-148523753-2	3.39861480941331	2.17036206859515	1.27321050457156	1.70463726210418	0.0882620973282446	0.841135930691803	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.62438888480879
Merged-chr6-71487107-1	1.71925956793463	0	1.4328423230676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-124454888-1	2.58313006656464	0	1.41351738857388	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-151298446-1	1.40895757263697	0	1.55268041499232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133459435-1	3.92937223808828	-2.33388500234021	0.884531116847807	-2.6385561320414	0.0083259915326407	0.177758418570414	C57BL6J_F1_Control-BALBCJ_F1_Control	3.48415374011609	1.44075340970692
Merged-chr18-76245185-1	1.580941577437	0	1.49794552890254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-75297046-1	2.01998068575526	0	1.48594479857348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49456336-1	2.43611080170716	0	1.42908090891984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-74812017-1	3.32212059383103	-1.83052671436495	1.03909198234621	-1.76165993527515	0.0781267708796763	0.782716247593365	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11480110409737	0.723581231604105
Merged-chr5-137107242-1	2.67137599569621	0	1.41608296998465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20553272-1	1.50854564957326	0	1.5411855397866	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-17249635-1	2.84311313408459	3.15136267238776	1.25755135388266	2.50595147677906	0.0122122377877926	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.36166747209511
Merged-chr5-116031342-1	5.21184753139235	-0.0766186984926197	0.813005928897126	-0.094241254300022	0.924917514389655	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0500197815571	2.60076777446727
Merged-chr13-108390798-1	4.03344453924251	0	1.4344818711374	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-66113928-1	1.49205485798401	0	1.63605987353688	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-84742430-1	1.17670260061574	0	1.50476405489873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-56681329-1	2.62793247098075	0	1.53097539979926	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-112808882-1	3.22773121741923	-0.037124978464311	1.68442185967045	-0.0220401903781838	0.982415896029956	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86961804807321	1.84899591177394
Merged-chr6-38712987-1	1.44051390639741	0	1.47721244495253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16225723-1	2.63253534707746	-0.535031169239429	1.47618255510036	-0.362442414314436	0.71702144890153	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	1.09982365757507
Merged-chr7-99249761-1	5.52931469961481	0.054958073786372	0.764100262109236	0.0719252125822661	0.942661425270039	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75703864874546	2.78389072722304
Merged-chr19-46527094-1	2.81400640191015	-0.291010641695378	1.33875104679063	-0.217374725788647	0.827916326194513	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90763661962622	1.32551364848754
Merged-chr17-27700062-1	4.04801386434039	-0.528113954507675	0.825819847806978	-0.639502617804741	0.522496011209641	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	1.55431789539114
Merged-chr17-64559234-1	2.24177883773139	0	1.44134981504186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88322639-1	3.46598428434708	-0.860117461624761	1.17280922774557	-0.733382242633031	0.463325326583539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03361807480644	2.22306211139653
Merged-chr9-100357624-1	2.50617464866295	-1.58292686688874	1.38844014393816	-1.14007569847335	0.254254765322969	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.303163067301871
Merged-chr4-6469051-1	2.50442194970107	0	1.40227583216836	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35384404-1	4.5160571435144	2.4410523164768	1.07437369503756	2.27207006998757	0.0230822785130256	0.355648973268016	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	2.16285061185201
Merged-chr8-14376152-1	5.33791546379917	-2.13984344828884	0.789671265660661	-2.70979018908405	0.00673257817513623	0.151920388967302	C57BL6J_F1_Control-BALBCJ_F1_Control	4.26966215745558	0.988408630094828
Merged-chr10-59268980-2	2.94578554288475	0	1.41747597620577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95390726-1	2.14595160021059	1.86238141990256	1.46373704131664	1.27234699084156	0.203249859467774	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr1-118514742-1	4.38743974638926	-0.294518551461012	0.706570406796908	-0.416828314104112	0.676803990672697	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.78031746813851	3.67100614857181
Merged-chr8-46422896-1	0.571422945638317	0	2.35437295368201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-84947588-1	1.14350789591812	0	1.94845396885767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-32899068-1	1.76302593888191	1.09162455302671	1.69761222947837	0.643035278652615	0.520201208722683	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr17-5479141-1	1.75385480274884	0	1.50529361636341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39150629-1	5.09645450295484	-0.859816761188481	0.943719185454597	-0.911093866099904	0.362245918100696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	1.19182800327718
Merged-chr7-113312005-1	1.18278892938871	0	1.55355798760633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94153751-1	2.65781483216396	-0.590095747825452	1.08870780853566	-0.542014802501643	0.587808308625523	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88086620139027	1.28067447403188
Merged-chr18-44389641-1	1.34837607991349	1.12545475432494	1.4442071206199	0.779289021814165	0.4358094801092	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.904676873936758
Merged-chr4-154937919-1	3.65681016144741	1.32856569587909	1.03678553554817	1.28142769196394	0.200043482664795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.11667041872131
Merged-chr11-17898927-1	0.954903638392649	0	1.86157070278152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22010385-1	2.26661744825788	0	1.46600963467046	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103607287-1	1.31806699475529	0	1.60716051524877	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163532169-1	3.35735775071653	0	1.40415149361893	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-14200418-1	2.98350264640372	0	1.40042322651873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-14337294-1	2.4450184297784	-1.49242789996667	1.92996765049035	-0.773291666099941	0.439349786804732	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	0.601513806634888
Merged-chr18-77799436-1	2.33497509924026	0	1.44646786371443	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-120002589-1	2.59688909119933	1.12797200325942	1.35451421448573	0.832750214945272	0.404985617799704	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0.67591700901439
Merged-chr18-76978153-1	2.48381179431395	0	1.45670287925338	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-93070621-1	2.88587192796192	0	1.39983669372649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-54527542-1	9.35009607404764	-3.46385877439902	0.74169186755171	-4.67021269335615	3.00888036203072e-06	0.00032452326904688	C57BL6J_F1_Control-BALBCJ_F1_Control	4.89170149815698	1.30139522650344
Merged-chr2-14244340-1	2.50997330644594	0	1.39687549719119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-153515664-1	0.583926620545181	0	2.28344041180947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-110737032-1	1.34758081388412	0	2.28086280838778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-10173106-1	1.90209885989966	-0.788150193815423	1.38551795109775	-0.568848778314975	0.569458768686523	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	0.730937814817307
Merged-chr4-133200024-1	2.12705347725052	0	1.44387400951649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80103776-1	1.93547834207341	0	1.4158343590387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108055255-2	2.49779905480034	0	1.41247253587994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82848170-2	2.66730254737434	0	1.42528023298547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-91886043-1	1.53970856729632	0	1.51505294866012	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142355729-1	5.60503013727888	-5.13836757330287	1.1816607908772	-4.34842859556034	1.37116445605612e-05	0.00113794089567564	C57BL6J_F1_Control-BALBCJ_F1_Control	3.90167802036664	0
Merged-chr16-90694896-2	2.82022753236266	0	1.45038338389267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-55436785-1	1.71492220186699	0	1.45646468003231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-20742531-2	2.37088582529107	0	1.47332968878925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73301494-1	2.42022945576431	0	1.38746012158442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116072397-2	2.73627815304657	0	1.41651846693066	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-20917747-1	2.43033960496871	-2.89434629162558	1.31326307597589	-2.20393487380644	0.0275289245460298	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0
Merged-chr9-70843620-1	3.59849746893004	0	1.39145346190065	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67360025-1	2.528564627535	0	1.412370595665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87466422-2	2.65391730990794	0	1.39877682929681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-3880042-2	2.31910224147456	0	1.40001315622907	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-49090381-1	2.58207497704632	0.620947927207832	1.40322811505394	0.442513886763139	0.658117383656606	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr7-80741200-1	1.94526276440465	0	1.41265540678536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8387441-1	1.97017351067528	0	1.52852870567911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-34217262-1	2.90175682159383	-1.44150140316938	1.25075445222814	-1.15250551425297	0.249113405115576	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.601513806634888
Merged-chr17-43675372-1	1.3706593425632	0	1.57684602811296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-82783574-1	2.90345119894985	0.822656696151776	1.22803405174838	0.669897300470243	0.502923260751426	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.75238521850622	2.49104571813713
Merged-chr5-147848414-1	2.16125545228343	0	1.40084440465835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-103315159-1	1.64590992306593	0	1.44993530970789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-76049796-1	2.42496690899691	0	1.39708099630649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-123346176-1	2.15597699955918	0	1.4260042445433	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-95494047-3	2.87227780597073	0	1.40735950860334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-99953110-1	2.59865140203943	0	1.43900982628689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152609721-1	1.43890076670986	0	1.49192698553512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58402293-1	4.91237148927506	0.295954728967587	0.667244615797736	0.443547571551033	0.657369718176091	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1143152953673	3.28876478035681
Merged-chr2-35733901-1	1.77813438638552	0	1.61234274433199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77921956-1	1.28841405822964	0	1.69045420845343	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125560084-1	4.4270056750989	2.26698076769367	1.2759041722665	1.77676413085681	0.0756070557672116	0.767349504191534	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.93493833859813
Merged-chrX-9654653-1	0.764059174909515	0	2.07302264764702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142356437-1	2.75322643676685	-4.81946615963667	1.2855032395695	-3.74908908144848	0.000177478040612787	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.5355383688018	0
Merged-chr3-44715690-2	2.11304970864569	0	1.48277321086837	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-80048434-1	1.90135408808539	0	1.46999253019172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18202050-1	1.9153061359802	0	1.42553515276593	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121619366-1	2.16176156225078	0	1.48572213717044	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16204341-1	2.41322408417339	0	1.45697527174192	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72230850-1	2.01015641958635	0	1.41771465229082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46926464-1	1.85690000393477	0	1.5922878936116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152582967-1	2.61653349503664	0	1.40986229767566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84138022-1	2.96584065568807	-3.60498444327364	1.19724606174715	-3.01106393953209	0.00260334026857862	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3532311534736	0
Merged-chr19-12831668-1	2.95034369572637	0.0630266657832297	1.13502031092139	0.0555291083135471	0.955716940638523	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	2.00101204725338
Merged-chr14-27357339-1	2.01507639323732	0	1.47754467398423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13661606-1	1.46291070238866	0	1.50974109761349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-137899087-1	1.58963776747501	0	1.51383062557335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93767136-2	2.61209678951514	0	1.4263885324339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4959350-1	2.29324779640123	0	1.50190853334779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5287896-1	3.06674692772374	0	1.4120044865314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10918818-1	2.30656710651998	2.03943898603197	1.35987028429927	1.49973053281539	0.133684218129401	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.50561881865021
Merged-chr2-178870142-1	1.74850436213432	0	1.49886844054253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106206787-1	1.50212840155388	0	1.63605273310979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-21575725-1	1.24576798876049	0	1.95788383890865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-83096113-1	2.51731072230537	0	1.39800790788209	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76358964-1	1.46437368341339	0	1.55123870218072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57500000-1	1.28917690449569	0	1.68585859035779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191448205-1	3.29817796850549	-0.62879368607789	1.28493201656481	-0.489359497601228	0.624587205278353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	1.44257280273123
Merged-chr17-31052455-1	3.16262714214557	0	1.43495440553744	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30699883-1	2.80749796346978	1.83599022086763	1.34766989903997	1.36234416319272	0.17308929632407	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr4-125201845-1	1.06702007207531	0	1.65481544900768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134064271-1	5.39966257341757	1.09542590115449	0.8764302369636	1.24987232862892	0.211346189173567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	2.82451045193657
Merged-chr11-6497402-1	3.33521866670284	2.80797654149317	1.17122214007636	2.39747563285484	0.0165084789524567	0.283982407397657	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.71641155326692
Merged-chr19-40371925-1	3.11091578171478	1.68419519284404	1.31978506817564	1.27611323499221	0.201915493719561	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr1-135369054-1	1.52573303806071	0	1.48570112088734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55878142-1	1.59904199335941	0	1.63325836434626	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99173952-1	1.10209681968254	0	1.63182976848302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82195125-1	2.67367685771229	0	1.41911806032301	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111748777-1	3.55677811505001	-0.0439217913826182	1.21973958711687	-0.0360091546150742	0.971275059362347	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35476842211225	2.32584950509381
Merged-chr13-31963980-1	2.85996534856598	-1.46350823791235	1.3539599996776	-1.08090950859762	0.279737368540119	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0023426291647	0.376242425970964
Merged-chr17-17841120-1	1.36484193311335	0	1.79020386878549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53499712-1	1.85898628688386	0	1.43009744384837	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-50036498-1	3.19959844101172	-0.636895999791327	1.28601850952076	-0.495246370931837	0.620426221727497	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6263180312234	1.71273550799308
Merged-chr7-97313326-1	1.89829315794066	0	1.53809599234324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117238338-1	2.29161264103155	0	1.45785375977166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41539767-1	1.51778381304586	0	1.46545884692117	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-32572698-1	1.8939211784152	0	1.42714566311126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28446577-1	1.8610004218465	0	1.43608382968244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-87793722-1	1.34943707743768	0	1.48021210468483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31111039-1	2.12869871031205	0	1.44528037908073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-83586582-1	2.08336035500351	0	1.40848260696734	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126806420-1	3.03753850236949	0	1.39994239132485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-9433288-1	1.60399170494814	1.61327357945634	1.52864170218852	1.05536410340413	0.291258833626066	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.13743241080208
Merged-chr18-24972677-1	0.975569374367022	0	1.73011931181681	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102286878-1	1.65557617531792	0	1.45887478957276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-61052394-1	2.00392592227552	0	1.44572615900367	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-43322089-1	1.42596367096985	0	1.63534721021775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39451217-1	1.93551282024932	0	1.41668364737107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19876135-2	2.40407087340133	0	1.41576441155455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-31082628-1	1.25489089726297	0	1.54192978419152	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68050299-1	1.95301430082573	-2.35615640673131	1.39062249536964	-1.69431777105334	0.0902049154381998	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	0
Merged-chr16-93081741-2	3.26085267530216	0.655342344750645	1.07663021370389	0.608697709212615	0.542724825719733	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.338064021838
Merged-chrX-47846245-1	1.55580739852529	0	1.49367439733458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181127297-1	2.15039413034457	0	1.51294508463394	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-184664221-1	2.04371112834968	0	1.44308667992354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-88725476-1	2.41891547847645	0	1.61276663094351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134365627-1	2.27744825683863	-1.1092049490577	1.12321585481386	-0.987526079073654	0.323384804583354	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22563229031312	1.30064958020929
Merged-chr13-102866240-1	3.0030175041604	0	1.46378081362253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-100023100-1	1.63133051794526	0	1.53051176228947	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117771133-1	4.19578633113862	-1.90605940640945	0.927936683125701	-2.05408347473558	0.039967613188067	0.507240561847799	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72248972571407	0.921168194051549
Merged-chr2-10359943-1	1.49208959901591	0	1.47950823008857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-6054499-1	2.76310738873674	-0.139873639082467	1.07182452164324	-0.130500502888311	0.896170456298125	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.897114879832661
Merged-chr7-102292372-1	4.6004167236132	0.962519649045863	0.923968388950574	1.04172357036919	0.297539857847663	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	2.7351935204533
Merged-chr10-34201493-1	2.01580301899025	0	1.43734630332229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78848596-2	2.75595780776971	0	1.55423231531885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93464410-2	2.63142244860824	-4.54372700143029	1.29022388879018	-3.52165778428647	0.000428857368977287	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.82036772805142	0
Merged-chr6-86871979-1	2.00234999181642	0	1.46884838936461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-128441916-1	1.54343613246661	1.1398616096274	1.44112990839105	0.790949936567483	0.428973206386158	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.67591700901439
Merged-chr15-84212374-1	4.83726727516174	-1.18824625710674	0.791259545533428	-1.50171490987282	0.133170751608947	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.95343506933758	1.41437199749648
Merged-chr2-114157564-1	4.96164382107342	0.660114897887971	0.882826998447131	0.747728489329274	0.454623943366612	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.04403056204475	2.66716795699449
Merged-chr14-47518813-1	2.01631130672945	0	1.40272824577736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-34231905-1	1.62777779006389	0	1.6713549976793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83667373-1	3.09035051087411	0	1.466268054722	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93958673-1	1.43029584063946	-1.29574314114937	1.65590324388597	-0.782499307211095	0.433921192344974	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr10-94144670-1	2.11366805081033	-3.01448335940903	1.60434227668224	-1.87895276663964	0.0602509429177914	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88906532169278	0
Merged-chr16-38701532-1	2.88844551580119	0	1.43749749327186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5818731-1	1.16879340397307	0	1.72442891635623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46763693-1	1.70802617495017	0	1.49273987812219	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26325954-1	2.41317215300433	0	1.47769430315217	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46321890-1	4.72416679676514	0.919298066051874	0.898980242245761	1.0226009681318	0.306496551677135	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93871841517079	2.42400265594801
Merged-chr14-50981386-1	3.193655545788	0.325791606454729	1.01347313042552	0.321460526849824	0.747861421113742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.4068548238317
Merged-chr12-51673405-2	2.45830712266695	0	1.53864927447154	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34722882-1	5.09949414543087	-2.3589899884849	0.91506447456139	-2.57794948231993	0.00993885268687123	0.200552454151491	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33178800780166	1.74294609266651
Merged-chr12-105906816-1	2.88957396072272	-4.1959527880429	1.36587665276668	-3.07198514561598	0.00212640306651817	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57230422574174	0
Merged-chr6-88384829-1	1.36264566223396	0	1.57293337114287	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125443238-1	1.97685766872344	0.740795461797847	2.07311350138406	0.357334734110444	0.720841230078731	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00259395741298	2.11482992828633
Merged-chr10-21623907-1	1.84335334048611	0	1.46012980111354	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-51016647-2	1.91694096215705	0	1.50221597366406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31188935-1	1.54583992910288	0	2.22935739945881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-18059882-1	2.37840036275715	1.13016504987417	1.3084376635329	0.863751542295581	0.38772439273521	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.47792296811651
Merged-chr19-41380739-1	5.02472530074577	-0.481978299142752	0.868371630978867	-0.55503690119338	0.578869420450825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48366051229539	2.08188782053321
Merged-chr11-65795890-1	2.46767870225662	0	1.47705888957306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27781258-1	1.43535165518265	0	1.81020863107173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146332085-1	5.1615702556581	-0.758387006782229	0.946293628399672	-0.801428841980874	0.422883423508795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48516551763465	1.67575558916111
Merged-chr8-117538866-1	2.08563872853335	0	1.44359672306148	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-44574325-1	1.72314664742664	0	1.7414634400056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31735566-1	2.24288754176233	0	1.44449511310038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53595363-1	2.43455647900043	0.788816802258197	2.00931708312799	0.392579552964439	0.694630043912008	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	1.53935718689701
Merged-chr5-142478970-1	1.58804395305534	0	1.55723001727637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73953045-1	2.0232417541174	0	1.58269305282184	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-152292556-1	1.20919148263551	0	1.53537633859395	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4891999-1	1.8976165441554	0	1.44351291349662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-79144397-1	1.90981992349778	-1.26738154211196	1.42603031050437	-0.888747968943031	0.374138544693659	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr11-58982084-1	2.94472228827265	0	1.40740153458853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111797738-1	4.91304622683295	0.171473118504246	0.897206879216996	0.191118818275104	0.848432504529493	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64109723835872	2.19776446004195
Merged-chr1-166940359-1	0.92594347164287	0	2.41047867452525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35021369-1	1.35832213789028	0	1.67637779341881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-88223294-1	1.56129826529919	0	1.49061850166998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53408602-1	1.55967568074863	0	1.57856565377404	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17431193-1	3.30500241849069	-1.22792515604017	1.3154539473326	-0.933461151209498	0.350581919720533	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.303163067301871
Merged-chr2-35464723-2	3.16972212777139	0	1.40865513625098	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-53570901-1	1.44019579924042	0	1.59690912215426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-9494962-1	2.23500498484322	0	1.42035548012766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-35751550-1	2.64546286154559	0	1.39570629681957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-12709232-1	1.56933040195694	0	1.53906889636285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49642317-1	1.51313115708906	0	1.69952904054459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135616900-1	5.07203947431557	-0.462553319942758	0.732065382203621	-0.631847006001577	0.527486854576216	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47341853569617	2.16975527034349
Merged-chr18-75174516-1	2.42715227887659	0	1.49720121609855	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-91240477-1	1.14465512144326	0	1.99020186214901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72325952-1	4.0179545062717	0.187012339236375	0.872534335538587	0.21433235532323	0.830287888347035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.89117471195386	3.11879872956561
Merged-chr9-25519912-1	2.426591418606	0	1.43485632550255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38349163-1	1.84509100160044	0	1.48657779436034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78806034-1	0.948089061810839	0	1.65879245610246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-55774622-1	4.90833999528393	-0.00948734704389674	0.853593489877945	-0.0111145962995258	0.991132017796684	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40918939303534	1.70340695421451
Merged-chr19-45154625-1	4.09397358710378	-0.577677568731378	1.00671145839102	-0.57382635701262	0.56608531109012	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69181239031707	1.02674429890598
Merged-chr5-53572748-1	1.668006705711	0	1.55338850532188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5527488-1	2.5830807670732	0	1.44193528062419	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53079584-1	1.68475384036732	0	1.46170935740176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-26354373-1	3.3629194715551	-0.455682100386055	1.08086257129775	-0.421591155514743	0.673323463069036	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27254432176078	1.99898171566066
Merged-chr2-157514339-1	1.79925347776491	0	1.50246233803666	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61464313-1	2.61623096421559	-0.274849051815872	1.36368693594324	-0.201548496631863	0.840269712528944	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.577068348605183
Merged-chr6-121054083-1	4.96654990621772	-2.20038404447239	1.01909306505831	-2.15915907969258	0.0308378274810233	0.430486251679749	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30810693946836	0.723581231604105
Merged-chr4-149856540-1	2.30309411540204	0	1.41797229009519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-156183950-1	2.44881843300166	0	1.41462693608952	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-149958831-1	3.99481779544091	-2.11734228334613	1.27079010685412	-1.66616207659003	0.0956811371206907	0.88514821864255	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26648457881507	0.303163067301871
Merged-chr15-51083393-1	3.30268573967604	2.29272442015032	1.28865609332978	1.77915925902784	0.0752136556145202	0.764950726027757	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.730937814817307
Merged-chr7-102333861-1	3.76905121463437	-0.939915291643396	1.19776905453106	-0.784721635684088	0.432616794659707	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20440436174322	0.724326877898254
Merged-chr14-76332368-1	2.04390241254877	0	1.49074962521447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-13866508-1	2.20290530454698	0	1.43316361993648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-104042825-1	2.87711032642921	0.919176791647359	1.82524448311469	0.503591053226376	0.614548780924018	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	2.50116237726445
Merged-chr10-59259525-1	1.83906168191239	0	1.52524951786064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25011653-1	2.37332937521272	0	1.46250761657216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128858438-1	1.9593866016499	0	1.41878922327784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-75189612-1	2.72695849380829	0	1.42031328466859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69293028-1	2.32713729003807	-3.6144753965359	1.36699181697278	-2.64410902220337	0.00819062701699334	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.71218713769806	0
Merged-chr10-87639442-1	1.12706936315873	0	1.69225074791785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-103472185-1	3.40455216842373	0.989622080433675	1.33157780678055	0.743195084353618	0.45736357901491	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22933943739997	2.55755177139911
Merged-chr17-37250727-1	4.1037603577502	2.28287145684354	1.12985752631913	2.02049497716824	0.0433320706237285	0.53460917545058	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	2.00450053151183
Merged-chr4-140565458-1	5.47322841820421	-0.391883828100498	0.781996083393784	-0.50113272485939	0.616277717145772	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.18460203800064	3.76739608452347
Merged-chr6-42612493-1	1.00512016643509	0	1.81862515166411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-90137834-1	2.47702095701677	1.08923219075806	1.02828029142531	1.05927556896793	0.289474297991286	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29072512625674	1.97656658922368
Merged-chr1-134782879-1	0.986511490387024	0	1.79757465726161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107514743-1	4.779616822603	-1.29800241026864	0.882620702577368	-1.47062311871714	0.141393068205254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60998193236576	1.17788344834821
Merged-chr4-152491482-1	2.92901676556878	0	1.42104036635267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-183508043-1	3.53642640175686	-0.530930798298635	0.912002617449593	-0.582159292243456	0.560459390299665	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.44790810950236
Merged-chrX-18188363-1	1.84690846032637	0	1.45940205627792	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101998676-1	7.7238084649482	-0.312444529472807	0.592568472837107	-0.527271604540285	0.598004990114705	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.60746428566538	3.23742544357038
Merged-chr16-57383800-2	2.90777886997806	0	1.42032953423603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64861094-1	2.64387931472468	0	1.42601080060897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91091942-1	2.39459544976555	0	1.43641073398984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103345510-1	2.16001508533414	1.20273786534801	1.39971735307146	0.859271954233327	0.390190493529288	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr19-46505813-1	2.31825686856515	0	1.43089854762006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-165958320-2	2.44979292182756	0	1.48971708538621	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-127142256-2	3.37824367368955	0	1.39986402817186	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157382110-2	3.41768379369074	0.933248574082072	1.0367326387285	0.900182495678594	0.368023139852827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	2.55167191869051
Merged-chr10-120234187-1	1.87153058837828	0	1.46192402116723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-26545088-1	2.48573566116309	1.19874860746645	1.42113765655688	0.84351336546156	0.398941393994207	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr6-31077004-1	1.24408630914507	0	1.51623937008925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-25118833-1	1.39255803513877	0	1.72975991596004	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87510442-1	2.40704070143423	-0.260709234548166	1.16660917221194	-0.22347607129974	0.823165004570869	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	1.13341594473881
Merged-chr6-145657472-1	2.35270062255631	-0.573336108371687	1.47612001258043	-0.388407516655391	0.697714482539706	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17934440858676	1.44707113567902
Merged-chr7-122979313-1	1.22906576484446	0	1.55518556518611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-9889840-1	4.7947630841404	4.05382063529639	1.1093588391476	3.65420141098008	0.000257983696428016	0.0128652626132345	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.9291097258959
Merged-chr9-116157364-1	3.35177245084455	-2.20535839142824	1.82281147989969	-1.20986641556021	0.226330156093281	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.11407565701881	0.94927122251658
Merged-chr13-62627238-1	1.53923683724606	0	1.48990446120059	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-42176376-1	2.31708575355595	0	1.40904046830244	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83564948-1	2.92070377465152	-2.49868250331656	1.33065792597104	-1.87777974680695	0.0604113020139256	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74881841521221	0.724326877898254
Merged-chr5-30625114-1	1.45408339597531	0	1.52907460495444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-51868951-1	0.790725558198567	0	1.84222503940911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-121654866-1	1.86227343780713	-3.35123172276091	1.36845655511515	-2.4489134932595	0.0143287857254495	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97815176992225	0
Merged-chr10-122665988-1	0.733195004008337	0	2.44672158578227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165779132-1	2.73145697306816	0	1.38297951374353	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90286710-1	5.47459983555958	-0.250894577104442	0.937298581613773	-0.267678391951122	0.78894688376229	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58148496924487	1.70266130792036
Merged-chr8-120312602-1	0.918268648673813	0	1.65309702086507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115496715-1	3.06945661568848	-1.82443239886106	1.22013673580402	-1.49526880498261	0.134844302976214	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.04885222765555	0.376242425970964
Merged-chr2-73279129-1	0.866646059923767	0	1.61758573804966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39684854-1	2.98789249441818	-1.22165755125001	1.18989392967116	-1.02669449838073	0.30456434069685	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58180101474665	0.953310774576147
Merged-chr4-141476272-2	5.40723200829965	-0.267479222326294	0.965478200448446	-0.277043254008278	0.781746893587119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24040030834546	2.45279641610098
Merged-chr15-33183572-1	1.49600709879889	0	1.62916065594667	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167978420-1	1.7685281595348	0	1.45824545325339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127545446-2	3.61597524435537	0	1.38917820128184	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-87071210-1	2.65498855843342	0	1.4348097053951	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-122268741-1	2.57756547776191	0	1.45167414935718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62066862-1	2.00221607855209	0	1.46125176269448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30984293-1	3.14300815760081	1.17393403038993	1.45326953838896	0.807788231556348	0.419212500988104	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr16-92865114-1	1.87833768090061	0	1.45464719721213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-17773062-1	1.81828213303613	0	1.50169703700261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130738727-2	2.80712264035244	0	1.41709098002917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-90672612-1	3.24629034898232	1.69948922774311	1.69412720483938	1.00316506510752	0.315781225639354	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57272540080272	2.9423679385174
Merged-chr4-78448837-1	1.77555088608982	-0.346567864831876	1.66653103526463	-0.207957642251075	0.835262040855898	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	0.88866493597531
Merged-chr3-87090128-1	2.15485616192294	0	1.44823815188647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50285083-1	1.23524232243738	0	1.50540484817878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-15954564-1	1.56497249556516	0	1.5264548704341	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-80602808-1	1.39564994811929	0	1.70855538075509	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65415027-1	3.40554086510012	0.291964990566339	0.750323007715842	0.38911906947269	0.697188067563978	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88854826306555	3.02426955069745
Merged-chr4-26248387-1	2.36342087692177	0	1.41342902351486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61266929-1	3.73985796173063	0.109635579535289	0.974946992113942	0.112452861973112	0.910464343292696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16975473850456	1.74628343417448
Merged-chr6-129682939-1	3.13986113566315	-0.191008723684528	1.2329388742571	-0.154921486922553	0.876883214040615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.577068348605183
Merged-chrX-57304278-1	1.63005074248212	0	1.45531624281116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13543032-1	3.73582796410138	-0.88907039545102	1.1018714402258	-0.80687307338579	0.419739613572486	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30889993389418	1.66954091443199
Merged-chr7-93093933-1	1.47033328609467	0	1.47180206359162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-70899673-1	2.10030083223246	0.00671563287803936	1.39871980296475	0.0048012710364183	0.996169154686055	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0.55634759613363
Merged-chr5-44282304-1	2.79240702055027	-0.103088620725604	1.31443634639987	-0.0784280052875555	0.937487597137363	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59940250466392	2.62868091312828
Merged-chr7-98913151-1	5.56891315031053	1.87490113931687	0.850705256994425	2.20393740828753	0.0275287462784663	0.400223353557409	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46316345736407	3.11315779962494
Merged-chr15-35464701-1	1.6492332737407	0.506050199855403	1.40513006597049	0.360144738277938	0.718738898030019	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.977756232605852
Merged-chr7-45678378-1	1.83049206026991	1.26349159404081	1.60847149825587	0.78552314754154	0.432146904098921	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr18-8656076-1	2.38722160475819	1.79149659227048	1.44483617517522	1.23993060462597	0.215001062837107	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr3-115799766-1	0.971710957283521	0	1.58570519141377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-71311435-1	1.49512341479205	0	1.50747155125979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-103122800-1	2.65572363941059	0	1.40671027000542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11454928-1	4.704570138232	0	1.37055867231106	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-90321623-1	1.69335521626467	-1.28204712039466	1.62185464660906	-0.790482132955092	0.429246252663892	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88300575199072	1.25298535761957
Merged-chr16-22123858-1	1.81129095115288	0	1.51409381995945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-126955911-1	2.59397150635287	0	1.39627969982498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-81184352-1	1.97216070344178	0	1.50506160049203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-5047575-1	2.34751617117303	0	1.49061879859086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117276078-1	1.75313441964376	0	1.47902861544714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141470115-1	1.3436394303461	0	1.45826915477795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76199203-1	1.34908950266665	-3.59753796279635	1.57149917730002	-2.28923948212131	0.0220654417624698	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11480110409737	0
Merged-chr9-111552594-1	4.75185999863494	1.62694209358716	1.11688308809881	1.4566807492417	0.145204526135668	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90781241071831	3.20267606236337
Merged-chr12-26390240-1	2.08630261107138	-1.17819437638276	1.4720501680672	-0.800376510217538	0.423492686362877	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72320011534497	0.67591700901439
Merged-chr9-107278171-1	2.99843249125645	2.98347187116342	1.21706285377191	2.4513704135469	0.0142313419023344	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.57877988104955
Merged-chr1-7109584-2	2.05257994759095	0	1.54125068377829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58063577-1	5.38816297248798	-0.0119351594059493	0.900477903156756	-0.0132542501755	0.989424948049825	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30670691456252	1.7421731315418
Merged-chr7-29042354-1	3.58233406805368	-0.0401338056585806	1.29898752085893	-0.0308962211061451	0.975352303606498	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr11-117208020-1	1.61434882365609	0	1.57546764364767	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-75425894-1	1.40735717472926	0	1.75951879377592	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110464710-1	1.82720390944894	0	1.57569829352768	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-64063012-1	3.12592184861182	1.77836379364134	1.02468459401204	1.7355231102659	0.0826481917386439	0.810220568930738	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03295826569721	2.64982009797431
Merged-chr16-70868456-1	1.51954760664144	0	1.44463737523838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-44284580-1	1.66030543455767	0	1.45005593941127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-33124666-1	2.26284327162337	0	1.45743894265769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-63844305-1	1.11998294608019	0	1.5104832619041	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72070608-1	1.89480159157317	0	1.52019241558854	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-41337540-1	2.02549275785769	2.02346789549064	1.43791391585971	1.40722464201261	0.159360786803231	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.990331813111976
Merged-chr2-25694829-1	1.53892079891682	0	1.58343098254519	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72038407-1	2.24820950427186	0	1.40090003703869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-39344237-1	2.21396984424348	0	1.41122980743393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122739645-1	2.38025522944392	0	1.48667712335572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59267491-1	2.26239714590373	0	1.42171660905912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-59522045-1	2.53671544576452	-1.5945342803156	1.33867281978312	-1.19113069059991	0.233602283225427	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	0.716426531808663
Merged-chr8-56287500-1	1.78288018586276	1.28270866081808	1.45496086779102	0.88161041936856	0.377987518640978	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.600815099743027
Merged-chr2-71955760-1	1.8969690427602	0.757780911320815	1.43615115109785	0.527647045188478	0.597744333895474	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.662147012823607
Merged-chr17-30658252-1	4.65456466078401	1.50526631416211	0.998092016603088	1.50814382754522	0.131517720195552	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.40946581534446
Merged-chr1-166169240-1	2.01957129016615	0	1.59833214552461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59910504-3	2.67884979310688	0	1.4292606734784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8483137-1	1.40539293182594	0	1.5494636426921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77318928-2	2.88511443466891	0	1.39262539404382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41291276-1	2.04164955258714	0	1.42098306739728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-108519023-2	2.68249483510946	0	1.45156987821613	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123129128-2	2.65795488682465	0	1.39262925402912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75186363-1	1.22488481191272	0	1.96579399227645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-64598297-1	0.978733242110827	-1.69653265498778	1.92675463422154	-0.88051307875703	0.378581423204526	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr2-145858625-1	1.47102696354213	0	1.4755904252977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155820071-1	1.59893571220435	-0.167276109401807	1.46713507251971	-0.114015479920688	0.909225522263521	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.67591700901439
Merged-chr9-48561661-1	3.52722832573509	-3.3639641402446	1.19282173013329	-2.82017342178088	0.00479977019676506	0.11973873709314	C57BL6J_F1_Control-BALBCJ_F1_Control	3.88087153413708	0.859510663435501
Merged-chr7-113186624-1	1.78806082685532	0	1.60599827233405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62267415-1	1.68453477411551	0	1.6175480533256	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96625320-1	2.05805314545091	0	1.57374395463102	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98344518-1	2.33009111460367	0	1.50477709984335	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106717392-2	2.49464898371982	0	1.40243814177386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-95153410-1	3.9258801747383	0.587187154847961	0.839168180757882	0.699725237815442	0.484098912092148	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70053333418224	3.80789382893983
Merged-chr1-144355198-1	1.11598870179612	0	1.94062860597255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-64018188-1	1.99936645911024	0	1.41619360538769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160361360-1	4.79621868647732	0	1.37006129633546	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69752124-1	3.14443065374045	0	1.38834244392523	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98782184-1	1.73904229394686	0	1.49696979043553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-30468772-2	2.95052018792446	0	1.39656751020483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45045508-1	3.1035639745003	0	1.38200228009524	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-52097016-1	1.63454344331009	0	1.43175730513175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55389929-1	1.57239816518159	0	1.58882818358536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135355665-1	1.30747363085496	-1.17046446564287	1.67339979071604	-0.699452977188453	0.484268989892433	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr4-144906060-1	1.71784628330714	0	1.52502654491817	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5092153-1	1.65401897274995	0	1.45186946880188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-75372174-1	1.21579437721312	0	1.50652977771834	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-58724675-1	3.75446897324328	0	1.39104851704139	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-8983342-1	1.29946689518937	0	1.48626531560739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108567357-1	2.77709426710812	0.0369496107039013	0.924052547518656	0.0399864821574504	0.968103903350026	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1359713465465	2.42698818581862
Merged-chr17-70705139-1	1.82449649009185	0.898091887279251	1.44550783185	0.621298527403929	0.534403222435722	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.09982365757507
Merged-chr10-98666749-1	0.931055950787492	0	1.97574029031809	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-79806850-1	1.27186188786417	0	1.51613940456486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91210787-1	1.71469413420151	0	1.43769772440904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117284241-1	1.29573073816285	0	1.62503276546195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46921323-1	1.87616833805171	0	1.45347016816156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136474185-1	2.44275640092493	2.16329481496403	1.61362335581597	1.34064421363689	0.180035994950039	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.38950137562363
Merged-chr19-55921619-1	1.22197570370105	0	1.75515783770172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-35441696-1	1.8715976009866	0	1.48611985775229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27128677-1	2.48370871508773	1.30893410398608	1.39752466236132	0.936608948120057	0.34895974748356	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.2679693671925	2.73143370605982
Merged-chr15-35358896-1	1.27991628324328	0	1.96568816174517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59415147-1	2.29837989050876	0	1.4819348895527	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-71257232-1	2.70080711226546	-1.54399592376511	1.33553301839106	-1.15608966794785	0.24764448173444	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10370544471103	0.953310774576147
Merged-chr4-152171722-1	1.94086203987448	0	1.43534387330694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101775983-1	1.74866591362892	0	1.53127548580082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124321643-1	1.19734562136252	0	1.46504811249903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-137863603-1	1.73929378060299	0	1.54399812948741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-110382639-1	4.11244309554111	0.111887891241075	0.869380284823634	0.128698445541324	0.897596265459656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37490486545505	1.47418322843784
Merged-chr18-70520854-1	4.05780795075554	1.07295372212619	0.929594913480539	1.15421642972303	0.248411448366848	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25258823419701	3.62483806670318
Merged-chr13-33953039-1	2.20762449882005	0	1.42478446552969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125540358-1	1.85281300422515	-1.91528237415673	1.37430459844248	-1.39363746314125	0.163427109564192	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr4-58902097-1	1.52452655272623	0	1.51066462558351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119897766-1	1.17051828199677	0	1.5351009915966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77793770-1	3.57766269946753	0	1.41293159684959	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149843594-1	2.69986295983009	0	1.38844396150291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-124645912-1	1.00210907905326	0	1.56629908648281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66985592-2	2.00013388881457	0	1.48926891077576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-28165756-1	2.61986104091304	0	1.40320573692542	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-97665682-1	2.51120445032961	0	1.4068548389941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123207565-1	3.05113657898411	-3.20461199072048	1.30277013111726	-2.45984453755645	0.01389972107635	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.9069419865589	0
Merged-chr1-173391937-1	2.91899211079784	0.000118023220104884	1.13663914968369	0.000103835258655069	0.999917151450401	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.27673210875742
Merged-chr2-150868882-1	1.16750751797001	0	1.57495809404661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121500263-1	4.16317958294858	0.840060563785044	0.925117873486665	0.908057867933035	0.363847648761778	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34557707159302	2.17763454888709
Merged-chr12-76319397-1	7.12804636429598	0	1.35941723054021	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74703714-1	3.59383370817625	1.21733048016458	1.03469738818529	1.17650870106051	0.239391657500014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.92520958238212
Merged-chr18-9495637-1	3.77589734318571	-1.58567646612491	0.994214497411398	-1.59490378610801	0.110733752856309	0.968307815001739	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56041795642383	0.887876939341704
Merged-chr16-20213803-1	1.30044617278324	0	1.53178905886737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-31432037-1	1.4217384347324	0	1.5010234697417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30914948-1	2.01190958013818	-2.33406585277545	1.55681026092758	-1.49926160647526	0.133805778391744	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11035253202893	0.723581231604105
Merged-chr16-33693824-1	1.71928017628934	0	1.52403746500712	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-4186968-2	2.2062512430419	0	1.40906359559956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-116108949-1	1.57161790450124	0	1.57925846991841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-146965285-1	2.25067572544955	1.47735889172886	1.39180586815178	1.06146907807673	0.288476778375741	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15637648126681	2.1402320108655
Merged-chr13-37619430-1	2.34734843424797	0	1.43188022485823	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-3322888-1	1.88899718016864	0	1.41495460058614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-81053766-1	2.11308982024068	0	1.45465123644892	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40479638-1	1.40915848688353	0	1.56007974644731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-114596419-1	1.41038688656579	0	1.56354211132493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50379034-1	2.1937052309777	-1.08079383948071	1.20095838326131	-0.899942791144614	0.368150696342451	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.88893749265627	1.44790810950236
Merged-chr11-54155097-1	1.51828615501934	0	1.49334502000815	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30677104-1	1.97919219504434	0	1.40883641258472	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129544389-1	3.17002741783563	0	1.37172966463518	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-58383646-1	2.78876218247944	2.89935804192798	1.16346619898554	2.49200023555132	0.012702595317369	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.338064021838
Merged-chr7-80039779-1	2.01589634049982	0	1.41333244531503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-57804927-1	1.00825621467954	0	1.70415790526649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75756375-1	1.05821358493224	0	1.79341014166876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-31172159-1	1.4818992928288	0	1.44929727175069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78821753-1	0.628443736527653	0	1.99063943155603	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-60074582-1	4.21363267264964	-0.136387188868076	1.60356817564718	-0.085052317038552	0.932219798370298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20522465958855	3.67991107535628
Merged-chr13-107794736-1	1.27412722315015	0	1.50423607809326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-168824339-1	2.33163478713826	0	1.45097329684302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67682495-1	1.38889719200531	0	1.55717117835114	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-5802809-1	5.01418970054974	2.88902867399551	0.970941821279184	2.97549102395168	0.0029251991065356	0.0833696030377574	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.01459971557561
Merged-chr7-16199513-1	3.34531780688267	1.41993480167948	1.02772025711958	1.38163551009413	0.16708364495033	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3532311534736	2.96070790024861
Merged-chr16-65469920-1	5.77545726654126	0.302206387381475	0.942399340628527	0.320677630334419	0.748454701118441	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.25271128942763	2.65859372250627
Merged-chr8-128652907-1	2.80426039554001	0	1.3920083402304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34007528-2	7.91750433465267	0.861529668153877	0.690259268166188	1.24812473788683	0.211985380260427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71006424143027	4.58447858861341
Merged-chr13-37520163-2	5.66529958827009	0.314556451413056	0.743505146771979	0.423072325428738	0.67224249307499	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63349449381055	2.43209395204333
Merged-chr6-88500988-1	1.4163253483925	0	1.53840010417392	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106643478-2	2.07799843413936	0	1.45256932061503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-5006449-2	4.38942769246079	0	1.37367929638167	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-80672384-1	2.46081012180002	0	1.541324755262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63206493-2	5.54663081634496	0.645462017721145	0.701200798986519	0.920509529729664	0.357306555362098	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27378670316772	3.37502210815471
Merged-chr12-119106428-2	1.40936800569472	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-145950225-2	6.49232830422298	0.691511160598699	0.714380945302743	0.967986569554495	0.333051077207228	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.50077645420998	3.03248631275913
Merged-chr18-10894272-1	1.27718654855309	0	1.63198671509318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138964062-1	2.43581184566972	0	1.38991987506642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-7892903-1	1.60130229061826	0	1.49940734242334	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34309400-1	4.05789855802087	1.39789755871649	0.956816770192002	1.46098772749977	0.144018809426226	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45547307112966	3.29893475867859
Merged-chr14-17712062-1	1.45297897795798	0	1.59835163240073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95336563-1	1.78710164193235	0	1.45549961796197	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-53346717-1	2.09423552818543	0	1.48073476376103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-21950522-1	2.02482328134215	0	1.46462581431662	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126691808-1	2.03080170788358	1.84445489853133	1.59036502470856	1.15976827324239	0.24614316465871	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr10-21054949-1	1.47165502050181	0	1.5643928874383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-105675423-1	4.79255491565884	0.565979551561496	0.83646590017792	0.676631948105845	0.498639503542299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70982598363525	3.11028567172458
Merged-chr5-86187003-1	2.17921332094833	0.767438884268456	1.99864803900416	0.383979004452849	0.700994008922719	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	2.47481144691616
Merged-chr18-20695175-1	2.21110129199697	0	1.43047257334931	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83616462-2	2.48458861718366	0	1.42558559720565	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173546162-1	4.05697204134722	-0.584313823741857	0.957557938358273	-0.610212500293883	0.541721050256356	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99844440789185	2.33847304688892
Merged-chr6-7648643-1	3.53881772748254	2.21217524987405	1.09244754253111	2.02497160160992	0.0428702803581959	0.53083953758341	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.35362373703631
Merged-chr5-140349147-1	1.03404323266809	0	1.58910844109721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130001948-1	3.84510008227008	3.77965987247051	1.20547542070126	3.13541015234619	0.00171613988353205	0.0549720965992449	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.02118723225548
Merged-chr5-150215135-1	0.896617481516193	0	2.02873463856497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24675533-1	2.23522568964568	-0.717215085882925	1.38805716672822	-0.51670428500684	0.605362604375495	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3733717703108	1.65345633230702
Merged-chr7-4460710-1	0.890614844709779	0	1.83943701226775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-87070407-1	3.03526272881264	0.389050603052473	1.09045526032836	0.356778143227372	0.721257900042723	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18885111947556	2.79660994316778
Merged-chr15-8706488-1	2.15828694195399	0	1.42688216342251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-85151584-1	1.91340650097204	0	1.45999692392531	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94594451-1	1.86218100716985	0	1.43838003236842	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-76924955-1	1.29499558915723	0	1.626175422703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-76222508-1	2.2410469635461	0.694064958182663	1.23042395895891	0.564086023462942	0.572695589438284	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.948471875794396
Merged-chr3-127760140-1	3.76498445770768	-1.22565316406569	1.18069250594756	-1.03807990470986	0.299232856157279	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27065540242443	2.64818605663689
Merged-chr16-50306908-1	1.69779476411636	0	1.50320817996639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-121155501-1	1.0404084456047	0	1.77734996944084	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-139416933-1	1.32251167722149	0	1.66375086550629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-159503309-1	2.35308449883095	0	1.43032817253885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-143988944-1	1.82469943770404	0	1.41787181539724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65170782-1	2.25476425727292	0	1.41834131767847	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34189688-1	1.6447170757894	0	1.47689007982953	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137801864-1	4.04033898718419	-0.322334045764325	1.08567239539019	-0.296898076374576	0.766544324823191	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.01243752527112	1.35418021299255
Merged-chr5-148536347-1	2.31957872134993	0	1.4545435498934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155121576-1	2.27099807056219	0	1.55988621509364	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25632704-1	4.60829036553936	0	1.3698418206477	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20672003-1	1.37493843527834	0	1.57111729770741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27122898-1	2.53556426829465	1.26669407237185	1.41984103466948	0.892137951673387	0.372318995012586	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.55634759613363
Merged-chr18-67983804-1	2.48577769698334	1.45175257308999	1.51174084832105	0.960318413504744	0.336894985513656	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.40715059974788
Merged-chr15-67107212-1	1.28201465381248	1.7017969280235	1.74267667291985	0.976541979627317	0.328795955305819	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr2-60813199-1	1.15568505175551	0	1.63096120600893	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23332428-1	1.73149383664136	0	1.53631995549362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131605407-1	1.867868768498	0.306254275453103	1.54595222783676	0.198100736839483	0.842966248343848	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	1.20027794713453
Merged-chr19-6663576-1	2.59017404635615	0	1.42936393905232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-114886204-1	1.37416169957174	0	1.60491230103689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52328831-1	3.43021064943179	-3.59673323213672	1.16138143435659	-3.09694397183931	0.00195526825705492	0.0612601885793938	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20491078807447	0
Merged-chr5-62751880-1	1.28591933719414	0	1.50519689817062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-78130195-1	2.46631343346118	0	1.42874329982348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3624488-1	2.41224302080692	3.02112309731495	1.32370098282405	2.28233047834529	0.0224698364285201	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.93328653765623
Merged-chr4-47037499-1	2.74287133848327	0	1.43868767730845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-85161909-1	1.2382868841699	0	1.46685345446964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-46531837-1	3.44535788360352	-0.991124231138701	0.995779304459247	-0.995325195754019	0.319578127362952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94767211644437	1.11893902259477
Merged-chr15-73610049-1	2.66769390212866	0	1.47802738502021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-91161424-1	1.01352933211041	0	1.657895105281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-79465482-1	1.98910835242754	1.86473506377821	1.45153054501946	1.28466815264518	0.198908271763388	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr18-24112707-1	3.0113323246891	0	1.41328848561821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-4107565-1	2.06599189360453	0	1.40668857840622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103306587-1	1.59703353704359	0	1.50710436919398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102628433-1	1.14746846310928	0	1.8521653384465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153408575-1	1.34217034310514	0	1.54690055920535	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-39006907-1	1.20301758545535	0	1.78748239817177	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-99005993-1	2.23738510492099	0	1.40928291454558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-123116470-1	1.75553892317343	0	1.48038243460902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-49983330-1	2.67613612316105	0.547965553438224	0.945387714602534	0.579619922042887	0.56217095537257	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.79795952835561	2.25209014842511
Merged-chr2-118805004-1	3.44843562874147	0.903042616418406	0.948504225850167	0.952070208869114	0.341061376460969	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	1.61960275079262
Merged-chr11-58341497-1	0.963382183479799	-0.0277041527446261	1.88631806518852	-0.014686893613489	0.988281975613594	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.890396206374751	0.878778741524029
Merged-chr10-122687431-1	3.62907909235648	-0.217428680278617	1.01988444563056	-0.213189524764434	0.831179138493407	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.25298535761957
Merged-chr7-125762530-1	1.62000452098698	0	1.72627274402806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-54019665-1	1.29106073925498	0	1.57402185004298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5786758-1	1.07556172515926	0	1.77649746013264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-82808790-1	2.10850253051301	-0.569955594272221	1.53994409820174	-0.370114470348491	0.711297200733395	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.00182956598795	1.25298535761957
Merged-chr1-138542058-1	2.53596608236804	0	1.40971195130516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85455967-1	3.69428476375049	0	1.39556198945269	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-17295412-1	2.61867591881902	0	1.41635625589977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70627949-1	1.78373887877952	1.6013663784872	1.29359410472485	1.23792028166966	0.215745621224125	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.74224738577465
Merged-chr7-30812467-2	2.40906855592792	0.562826233212295	1.47916248302247	0.380503318379355	0.703571833756259	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.679405493272835
Merged-chr5-130067717-1	2.47757325455674	0.430469971811961	1.27423261248052	0.337826836007574	0.735493685396877	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40264952818025	1.55926189265627
Merged-chr11-110608693-1	1.77061211231807	-0.0420272337081954	1.55855203886998	-0.0269655633306072	0.978487200518673	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0.724326877898254
Merged-chr12-86687190-1	1.50807764851446	0	1.61828431839702	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-13615257-1	2.97301536690822	0.371757859222443	1.43459642491474	0.259137589335995	0.795529083002356	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.879366456215217
Merged-chr13-30766600-1	1.70702145149372	0	1.58469775887405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-87949192-2	3.43068854909946	0	1.38511519233771	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82906310-2	2.53443437890036	0	1.39100873145295	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-134486088-2	2.65884463821118	0	1.44834999078383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-26104880-1	1.45378462657887	0	1.45619091370739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-79785196-2	2.30160529302106	0	1.43301135716701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-140577585-2	1.86023796266326	0	1.42929991855091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-106220626-1	2.39478743298524	0	1.42260100045515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119079328-2	3.03518268695357	0	1.45621890402389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36127872-2	3.64288328540675	0	1.3853575601421	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85252594-1	2.38993813769903	1.97867321945468	1.11972252709112	1.76711030776078	0.0772097565804464	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45601292859778	2.72641927828261
Merged-chr1-135110328-1	1.66196284130687	0	1.44564876424235	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72135502-1	1.42362607909693	0	1.611505930995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-107521886-1	2.74551793999394	-0.975196203998958	1.35875956680826	-0.717710644194177	0.472935718821366	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.773587911294612	0.679405493272835
Merged-chr15-76550325-1	2.21200143437948	0	1.46716454348571	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-75219403-1	2.31936475606297	0	1.42344011664978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-166115963-1	0.761998411289436	0	1.83435212081785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-148893674-1	0.871633857708216	0	1.71049158746324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-81355533-1	2.40963424246222	0	1.41665130705553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107565740-1	5.33358893730172	-0.586827083797544	0.801971264529089	-0.731730811006208	0.464332886644127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31447273151311	1.51301315377886
Merged-chr7-104240763-1	3.1440767682406	-0.569544401310488	1.16333905405402	-0.48957730708492	0.624433037768116	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57481894122996	1.14143228603163
Merged-chr15-103281551-1	1.64462220730478	0	1.50388242415507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45944895-1	1.27968298405039	0	1.56209673087122	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157308555-1	3.52435591929427	-1.94025821563248	1.52690853862504	-1.27071017454631	0.203831774589774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr19-29505757-1	1.22695092973066	0	1.62056539300346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47699878-1	3.1705160680287	0.557272786845123	1.2564649029464	0.443524355943667	0.657386506293777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.723581231604105
Merged-chr3-90086178-1	6.02949324134949	1.7424598004046	0.975922930060334	1.78544816064203	0.0741886527486901	0.759333642396167	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	1.55716820277606
Merged-chr10-6462371-1	1.10577045909148	0	1.84757380892899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70545934-1	2.58774034095495	3.53346573015761	1.32076991474246	2.67530755411445	0.0074660723657498	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.086211388454
Merged-chr9-41046169-1	4.86583310356	1.02792714652246	0.796311474314021	1.29086064897905	0.196752002762875	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.96407117436956	3.3068394359208
Merged-chr3-126399660-1	1.76666204741757	-4.44133567098171	1.53877362964779	-2.88628267693818	0.00389821861561124	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86354445431429	0
Merged-chr19-25050950-1	6.90959526898154	-1.24648727425169	0.704855740759486	-1.76842891697044	0.0769892258767071	0.77600040147172	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32926715505813	1.4050022446214
Merged-chr5-112153991-1	2.85175144224278	-0.0370377335199531	1.25078945996562	-0.0296114851503234	0.976376905505791	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr2-129598567-1	3.0282873817128	-0.944980779208141	1.08537161574822	-0.870651826063006	0.383944289533229	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.78424187151255	1.55373018069996
Merged-chr2-44818875-1	1.07643933432583	0	1.7066693828003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36749895-1	2.7056351428589	-0.0352083260692468	1.37310403559828	-0.0256414118351245	0.979543355050102	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.600815099743027
Merged-chr6-26393116-1	1.4640362949004	0	1.5636819306174	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146778440-1	1.98707999983337	0	1.44107247299383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49195753-1	2.50731345846939	0	1.4508495502561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173388414-1	1.07528759846714	0	1.59450120699141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-181060377-1	1.80179182095648	0	1.46222456417302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-100745290-1	1.74348190576452	0	1.43240021731701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52807850-1	3.20168873030228	-1.95815811835562	1.27090630417874	-1.54075726268507	0.12337587440857	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6918997744453	1.01466627894101
Merged-chr12-35607909-1	1.9988527906268	-2.62850246109215	1.41458967577085	-1.85813773853525	0.0631494568654388	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34574950999398	0
Merged-chr10-125316780-1	1.61399503222639	0	1.52649216062488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47733710-1	16.7124827574112	0.730483654198083	0.578841592140777	1.26197506211756	0.206957760008529	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77167105195599	2.73110151720281
Merged-chr1-67017655-1	1.02701438421816	0	1.7164859735888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14989676-1	4.57876028142819	0.0673670119515006	0.988067096787119	0.0681806045060672	0.945641866400487	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84396608304482	1.73331651334413
Merged-chr14-13966686-1	1.92239458448015	0	1.43567797933383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-104662574-1	3.58637776724461	-0.95467534299746	1.62612118146058	-0.587087453187204	0.557144973693587	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75554977558781	2.2374989443617
Merged-chr11-8576853-1	3.87480394149094	-0.0628015785103648	0.683478470764698	-0.0918852329614719	0.926789224213244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88838860959597	2.89077428347377
Merged-chr16-91823353-1	1.76623499971571	0	1.47873882680954	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-110499393-3	2.83503244271255	0	1.45769762782977	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-64494367-1	1.52635557913708	0	1.62824974267124	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52419503-1	2.37519599284489	0	1.44405525126961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-76237583-1	1.978638661366	0	1.43109394987134	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22423467-1	2.36782085419279	0	1.45481870809406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-23482151-1	1.65011074843673	0	1.54748672779957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-102440448-1	2.52373892360827	0.617875032729544	1.43442660094264	0.430747054135432	0.666652301017059	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.376242425970964
Merged-chr16-19974625-1	1.03871179380494	0	1.75184604504433	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-95915143-1	2.88712905305987	0	1.37814601827948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-58046525-1	2.92616712553235	-2.85285658183978	1.29412130941688	-2.2044738472974	0.0274910372200112	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53974014236321	0.465515277017237
Merged-chr9-45263282-2	6.05448891968313	0	1.38701158750672	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119724588-1	1.86718491863795	0	1.49219134940547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42176310-1	1.93466259358758	0	1.43799753554685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81129904-1	3.46421373843672	0	1.39403429975382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-142867991-1	2.391213282127	0	1.44515409563126	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42161884-1	1.07262917584912	0	1.54399691306432	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172422724-1	2.7064079413924	3.08626945580019	1.37336265857215	2.24723559835893	0.0246249742515075	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.00114351279961
Merged-chr16-18406108-1	2.05937005794673	0	1.48697549177051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-102067372-1	1.96427822344563	0	1.47840631275446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-15730371-1	2.45938921449357	0	1.39241625946973	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102644989-1	1.64931618742812	0	1.46818237307006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-12569453-1	4.50778139263263	-0.520912756026626	0.832744243482143	-0.625537504586541	0.531618341312168	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.15904272356132	2.73951397513776
Merged-chr10-99085591-1	2.20363860755247	0	1.48982551784187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-20292087-1	3.56784390328095	-0.240679314167699	0.774246327186378	-0.310856255582549	0.755909900969389	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25143168552214	2.43227527902726
Merged-chr1-172565126-1	2.14406743440534	0.257918658964717	1.52797903932185	0.168797249391056	0.865956121948824	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.02674429890598
Merged-chr10-94844947-1	2.74785228133696	0	1.40862973651478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-97530608-1	2.82237883799368	-2.26193031649499	1.19419668103029	-1.89410199544644	0.0582114729299618	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.8834919615147	0.601513806634888
Merged-chr9-25549311-1	1.68784728318665	0	1.47094938523461	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-18191049-1	2.34051837992462	0	1.50350477317656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-67820810-1	3.07134306167398	-1.49346076897899	0.998272959522401	-1.49604449838399	0.134642059639561	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.87663144399141	1.6028325397791
Merged-chr18-57881924-1	4.28939983009342	1.86482569708014	0.990667845551992	1.88239247438285	0.0597827469543232	0.664838449609258	C57BL6J_F1_Control-BALBCJ_F1_Control	1.17595087342351	2.60269955915679
Merged-chr6-131022417-1	3.50949938438568	-3.05195680273379	1.26903318542079	-2.40494640943674	0.0161748375472602	0.279837044631291	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46894927517136	0
Merged-chr14-104919815-1	1.18166003341777	0	1.79113331350738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-30920881-1	1.35756649894414	0	1.50067315616456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-118428522-1	1.99485891770102	0	1.49217319751199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-28986323-1	1.53295165824675	0	1.46674335512805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25959523-1	2.54976105008277	0	1.39153646042019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-81113230-1	3.14059118928055	-0.0425885461339219	1.16772523769853	-0.0364713759358833	0.970906502213086	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.83508240977611	3.17289566885817
Merged-chr5-96769266-1	4.93192920428116	-3.66547394250836	0.966469353813058	-3.79264373779343	0.000149051922531904	0.00815510509747813	C57BL6J_F1_Control-BALBCJ_F1_Control	4.24383330055997	0.841757702988201
Merged-chr16-76054464-1	1.83288803101368	0	1.47960401978724	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127426918-1	4.89988108740248	0.0442600544488504	0.851517761718861	0.0519778405555602	0.95854635021608	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.93177134892138	1.97656658922368
Merged-chr3-60590680-1	1.98248480110735	0	1.49833755710234	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62077061-1	1.41896285662537	0	1.52714692310896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85281912-2	4.06676922603784	2.34684102836601	0.99677141024012	2.35444255749738	0.0185505105870922	0.304740683953492	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.87315716250753
Merged-chr18-62068200-2	3.08898449296718	0	1.39312324707773	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-13164519-1	2.18876961785201	0	1.50575109571372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28909457-1	2.41332165484845	0	1.44186485060386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-64068472-1	2.98012590732482	0	1.40632898233816	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32159955-2	2.60244104752902	0	1.42123005892458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171974038-1	2.7170535298099	-3.47303533827019	1.29571412986394	-2.68040245778201	0.00735336918503606	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.3480509837169	0
Merged-chr8-91411025-1	1.43652674708801	-2.39850792343852	1.44108775329179	-1.66437326107294	0.0960378601444475	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.14490468848716	0
Merged-chr11-86999718-1	2.00646343927218	0	1.48265075621828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43090546-1	2.84832624168298	-0.200287409115022	1.18367217706625	-0.169208513130246	0.865632633837387	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.61093010937348	1.62518823153097
Merged-chr5-32104658-1	3.17402094987227	0	1.39710685238942	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-85005419-1	3.7106469524801	1.8042436687104	1.19367109245546	1.51150822040848	0.130659015798433	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47126464988938	3.54061485315131
Merged-chr4-9337618-1	1.97318217729741	0	1.48004067786342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123015262-1	2.2179703603364	0	1.49174774701507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73360467-1	1.79885265928356	0	1.53304927062052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99371755-1	1.21114897829922	0	1.57657067512859	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85899460-1	2.07909464832848	0	1.47023043977318	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35726723-1	5.89139398983027	-0.652826527002618	0.880861685875164	-0.741122627389582	0.45861909110072	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72487234908502	3.24029886222938
Merged-chr14-20845469-1	2.78879852801795	0	1.4042939613342	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-83566355-1	2.53219915054488	-1.62558784420336	1.24312014222287	-1.30766752865623	0.190986101548624	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0295486026821	0.577068348605183
Merged-chr11-93861015-1	1.52955526918009	0	1.49577765461813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-81401430-1	1.19967926969129	0	2.06523419373577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96503498-1	1.95116654385032	0	1.46874737716026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-96135048-1	2.066227931978	0	1.41624674586591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-79322691-1	1.76371591150558	0	1.42349258440732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-101999641-1	1.43539065038701	0	1.54372551288959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-76005866-1	1.91628547093583	0	1.45802894866073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-34991018-1	1.84986899545707	0	1.52492766235193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82792457-1	1.80339943998736	0	1.47584902197552	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-185278569-1	5.59095919697234	-0.67253689435929	0.803246581916644	-0.837273272616406	0.402438979121523	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86653995946335	2.66136271091996
Merged-chr14-27186430-1	0.910184779852811	0	1.98008605111903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-105749886-1	2.48350266305231	-0.729697554249844	1.83256988203835	-0.398182662173957	0.690495545189195	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65917935940748	0.948404007588321
Merged-chr11-114980335-1	1.08808686655787	0	1.89879853268158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123034812-1	2.41486239957489	0	1.44879298227706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82535338-1	1.87198797479317	0	1.5126545274613	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181245746-1	1.45708344081754	0	1.52872180201799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-99155336-1	3.63663741654829	0.378380930429796	0.962580263949622	0.393090264366359	0.694252814446205	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.62900736250262	3.46382943790751
Merged-chr2-129174585-2	2.11560959571291	0	1.42844121129006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-94095011-1	4.4409959533003	-0.883927916257894	0.945387618520826	-0.93498994374488	0.349793481968548	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.70095120031762	3.01351449837329
Merged-chr16-57398830-1	2.13184562182777	0	1.43225578979789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-37605887-1	3.07683368751124	0	1.4276589907678	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-101792357-1	1.66858361788184	2.7887866222928	1.58390066895461	1.76070802731173	0.0782878333931015	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.94927122251658
Merged-chr14-51103472-1	5.70286420438937	0.734468408078615	0.849730629803027	0.864354399286358	0.387393234974244	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.55093274776611	3.35869455212719
Merged-chr12-8435644-1	4.82252115955588	0.942673782561889	1.00376869737386	0.939134468955034	0.347661709011602	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56763655772049	2.40888287881156
Merged-chr17-67222477-1	1.4711348978279	2.19209442768108	1.66383574488543	1.31749449091925	0.187672926490894	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.01818211024981
Merged-chr1-172496669-1	7.1835239227722	-0.735478262358687	0.862595653183077	-0.852633861119852	0.393862378723089	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71489092404964	3.55438017069506
Merged-chr10-78264934-1	1.68662598543208	0	1.43772338637878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68766923-1	4.3320638345971	1.76550597318838	1.32747360409759	1.32997444750591	0.183526690464828	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr5-32720790-1	1.43582081151708	0	1.90459606047252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-121938316-1	4.36575311599704	-0.46148752626675	0.936014177920681	-0.493034760746815	0.621988026229253	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65946941398048	2.09074318537823
Merged-chrX-143051700-1	1.14482901268286	0	1.47246907102511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-115245696-1	1.97710075931503	0	1.44110913922821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-86418864-1	1.94128408572339	0	1.45718369213489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22113336-1	1.9281299011023	0	1.48495601265018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9100835-1	2.44960769201673	0	1.52471332512706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19069031-1	1.86170488101077	1.17217201254217	1.49629732186708	0.783381748675147	0.433402970637927	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.465515277017237
Merged-chr1-59583517-1	1.75720386622633	2.02487810552975	1.3539213938058	1.49556548466815	0.134766923197441	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.56379394835609
Merged-chr15-39769115-1	1.2393252274833	0	1.53593410414251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-13474465-1	2.76786756213336	0	1.45105567364838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-61738528-1	2.2146506994094	0	1.42194579724216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-67869770-1	5.03131557575565	-1.26724750920231	0.947783564285467	-1.33706423803381	0.18120166927254	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93205587445077	2.2152741959114
Merged-chr16-90214188-1	1.32035393770313	0	1.49702814145513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99162123-1	2.11834250473504	0	1.3957590243747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-38645105-1	1.98648251489765	0	1.5506310345853	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45079370-1	2.48235316452454	0	1.41110425384683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-116669484-1	1.85143066385288	0	1.51548313185598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-37674875-1	1.36248534053077	0	1.67020776308922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36054774-1	0.55579114460854	0	2.22301195729769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102698626-1	1.20431448970325	0	1.63982444334118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-42227470-1	2.16090638315102	0	1.40958639396193	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-52458945-1	1.91956208933092	0	1.51808500127896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30753309-1	1.52329086193078	0	1.49716171606718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-164014794-1	2.05283418746556	0	1.44672413141525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60273016-1	2.13940693043847	0	1.43207765208227	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169862006-1	2.02059493535374	0	1.43515678105835	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-72874522-1	3.35280357272659	-1.26119536133844	1.18788353428785	-1.06171634249863	0.288364477977897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	0.55634759613363
Merged-chr15-99825212-1	1.19026050947017	0	1.65670806940349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191122053-1	2.08637642847603	-1.77234824315399	1.36385483112439	-1.29951385052677	0.193767643329174	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.851599296279844	0
Merged-chr2-35906629-1	1.91266915056653	0	1.41738362288057	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120421459-1	1.60578228624846	0	1.61913737021479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75436630-1	2.22677829555932	0	1.41357410938697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-43906151-1	2.93185116818713	-0.970007657525741	1.15600636039082	-0.839102353379613	0.401411875599347	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9353401517067	2.13618807085394
Merged-chr6-136056513-1	1.5874817288126	0.580636720299074	1.74720428987692	0.33232331425879	0.739645137092773	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr8-47666439-1	1.59467645544863	0	1.47896128858511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-94808918-1	1.29321833369507	0	1.53035926902481	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-147450458-1	0.927795461210104	0	1.63701813588512	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-21379038-1	2.30446465945543	0	1.44693185220961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-81041767-1	2.50574319560393	0	1.43715712602799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3322051-1	1.5761032572232	0	1.50674938010636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30557266-1	3.92349730436431	1.71914429230049	1.17874797895682	1.45844940817792	0.144716710426283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	2.50514783228644
Merged-chr18-4314769-2	2.86121466399913	0	1.41079057263266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-110921988-1	1.33960926480095	0	1.60001636384831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-86890243-1	2.15516716207689	-3.41967857495029	1.33187661421757	-2.5675640959874	0.010241585341429	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05529040810265	0
Merged-chr4-149901727-1	1.95810363080667	0	1.43882127578175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31016367-1	2.31389861237945	0	1.51154110726869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20025729-1	1.75896517146969	0	1.43734089684125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-20006773-1	1.76207912919705	0	1.4474279239189	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-88540581-1	4.57472690217864	-1.38095191764173	0.759266947553599	-1.81879630358102	0.0689425125534929	0.725304052621505	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70317705787455	1.71450075940727
Merged-chr6-119220514-2	3.03655868555591	0	1.39396932009976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-90778529-1	1.82817115200933	0	1.41034023715978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166228581-2	2.68917091769664	0	1.41352695139991	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94621906-1	1.93877611717886	0	1.48906092394445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64794942-2	3.51078264053626	0	1.37241601798736	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41556752-1	2.6749948235639	0	1.44034742559645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-182909350-1	2.31017601146647	0	1.4058962410069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-93576020-1	2.62270042796345	0	1.42325075696051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-36175001-1	1.8490044314128	0.451062992334821	1.63172535277855	0.276433158047546	0.782215392074564	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47954504644696	1.73709028346892
Merged-chr1-191392698-1	4.79406670264537	0.643561207761596	0.763092974590407	0.843358842488401	0.399027782894194	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6847444908354	3.29696603390973
Merged-chr1-155462715-1	2.09978256521008	0	1.41394486168448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-103411222-1	1.92407598119908	0	1.65497694061473	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-69250564-1	2.38054090064101	0	1.42436092592785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37049187-1	1.08564937923984	0	1.67948133104253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-144470587-1	1.22099571268182	0	1.52852938042097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-94417941-1	2.13004693701711	0	1.55620397310188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-98759193-1	1.71269333642783	0	1.50755167859631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-119472405-1	1.95043681293353	0	1.44622000626677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17867817-1	2.53473526227409	0.44558681726097	1.3843432569366	0.32187596178061	0.74754666458711	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.803125334851723	0.904676873936758
Merged-chr18-61232184-1	1.49096124257682	-1.62607764653006	1.67840078374827	-0.968825600104071	0.332632211403694	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61760369666849	0.465515277017237
Merged-chr17-66532499-1	0.855224322116392	0	2.04176143547861	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-133087474-1	1.77609433550818	0	1.63646629476577	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24751275-1	5.45945751956267	0	1.35713789405229	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-102806917-1	5.10886939585741	0.306745813587705	0.866565678675289	0.353978724447781	0.723354827721461	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55771059403982	2.7804345304524
Merged-chr7-30301082-1	7.39246171706957	-0.88219457938133	0.678350220539715	-1.30050017331671	0.193429596905567	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72006568789831	3.33207201869011
Merged-chr4-139204440-1	3.07390369883202	-0.162612796873787	1.0161202666693	-0.160033021885105	0.872855061734294	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.52696130946871	1.43996574690471
Merged-chr1-180226668-1	2.26466593777969	0	1.47755567711261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132776944-1	2.52467457444323	0	1.4105045928266	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95442481-1	1.36064901620522	0	1.46477800499281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34258651-1	1.69319850742172	0	1.48374793927921	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99217204-1	3.18569860489936	0.949516605663188	1.07725739791278	0.88142036202574	0.378090340687045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1935786047746	2.72172514343895
Merged-chr1-154787836-1	1.8975145470079	0	1.4192085556533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47534390-1	5.26022846992893	0.0626210938118555	0.957322357601892	0.0654127560216209	0.94784536799583	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.448669955687	3.21959318617608
Merged-chr17-71256548-1	2.18337779228428	-1.67604058197491	1.45179812603223	-1.15445842773991	0.248312272894427	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0
Merged-chr9-90028041-1	6.10081384494853	-0.239814249629306	0.859451228920348	-0.27903183049789	0.780220397287973	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44070193550272	3.01991394554802
Merged-chr9-24217923-1	1.19356720305007	0	1.88687839811086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-42978293-1	3.92131050384676	1.93645729695784	1.03196016235978	1.8764845461958	0.0605887747771037	0.670957911219113	C57BL6J_F1_Control-BALBCJ_F1_Control	0.916190436775555	1.78902213248686
Merged-chr15-59077368-1	1.52514547286338	0	1.4515099788566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27969965-1	1.18188454634749	0	1.56850422571063	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160317978-1	1.63091949750949	0	1.49471737912737	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-146655115-1	5.31164715360884	0	1.36187611180949	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-136961621-1	2.22630767534098	-0.907399854047861	1.24826729717173	-0.726927522737964	0.467270355919043	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	0.662147012823607
Merged-chr5-82457479-1	2.20999490244527	2.31521726484825	1.91257805850568	1.21052171154633	0.226078764755232	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11548603074465	2.37128863965128
Merged-chr6-97282592-1	7.15532265816978	0.835627599075815	0.705001864021733	1.18528424068118	0.235905082292584	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.56041795642383	3.17371667764308
Merged-chr11-83668315-1	2.69228539813481	0	1.4812487968311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-103282533-1	1.03610433020024	0	1.84407589317981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-17728691-1	2.28240934201769	-2.71687455406688	1.36044466036582	-1.99704893055799	0.0458198678616979	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0
Merged-chr15-79524264-1	1.56284034184979	0	1.55379115478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-127658658-1	2.42502420444836	1.44882309652139	1.3553960002221	1.06892974177582	0.28510132905969	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0295486026821	2.87982218541378
Merged-chr15-31347233-1	0.860422586697153	0	1.80776670963365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-95921599-1	4.83349103016799	-1.56925970650427	0.840949123470813	-1.86605784191502	0.0620332733789393	0.681363246636848	C57BL6J_F1_Control-BALBCJ_F1_Control	3.58000019006356	1.79264310302021
Merged-chr2-18205316-1	1.34170129967369	0	1.54185050713321	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-75437136-2	5.82781854398072	-0.0173577695541981	0.674774517005531	-0.0257238071633577	0.979477634767847	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76501444179017	2.61161563923993
Merged-chr10-39246598-1	1.31277508574318	0	1.58402660421106	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75049414-1	2.93651646465484	0.010108708855751	1.04153218785451	0.00970561349291983	0.992256162417943	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.32852444445417	1.4277097602107
Merged-chr8-126539432-1	1.3775667164138	0	1.49893880799201	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60682430-1	1.09806275877619	0	1.73569602564778	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27897775-1	0.973602427864845	0	1.59459727016695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141531855-1	1.83467145836842	-2.01582814585064	1.53178703097055	-1.31599765835163	0.188174828618731	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.54028618764495	0.789505890477757
Merged-chr8-88105630-1	1.15066877261154	0	1.82094947520232	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-4551219-2	2.89712596943692	0	1.39943349591913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-119089490-1	2.34938742480596	0	1.468147198918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121419817-2	4.85760111008581	0.367307597414655	0.896022118434284	0.409931395506722	0.68185627399258	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	2.12731360277519
Merged-chr19-40742072-1	2.16816376195953	0	1.43537968757454	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36208841-1	1.27189903448967	0	1.52534046047992	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-42093356-1	1.61798918303968	0	1.47694994376928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-42953107-1	2.50206827414511	-0.561573354463903	2.15817609055754	-0.260207383874236	0.794703808887635	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00071484268282	1.44648342098783
Merged-chr13-113494936-1	1.92874456884416	0	1.45715457125069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-23893350-1	1.84810649126928	0.244073436576437	1.23332224795037	0.197899159754928	0.843123961594966	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.926147595614233	1.97731223551783
Merged-chr15-27520127-1	1.3297636839762	0	1.53566674582964	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-57692281-1	4.21599912093633	0.165475250044936	1.16223787000998	0.142376405308076	0.886782698349295	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	1.28129123231014
Merged-chr19-6502162-1	2.00341846126872	0	1.45024506309416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30673876-1	1.72441649938853	0	1.44013026217714	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-45974509-1	2.02292903367699	-2.18136879459692	2.31964874880013	-0.940387546056386	0.347018808009093	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2679184501	0.724326877898254
Merged-chr16-21646195-1	1.88933054788745	0	1.47103491262713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-6284764-1	2.22323127919899	0	1.45584008460615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-98772786-1	2.20731046870644	0	1.42143487915327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32816161-1	1.90654466609808	0	1.47296009689045	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30095601-1	4.39195675878974	-0.965508962257573	1.26576269956701	-0.762788287716055	0.44558966720373	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.67591700901439
Merged-chr2-71633672-1	2.69064720250255	0.527865170292236	1.1721640718292	0.450333859378992	0.652469728047101	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87671264857868	2.3532682208703
Merged-chr8-36933333-1	4.85840670521627	0.843458225347061	1.05222120350935	0.80159782233429	0.42278563771661	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92839347452618	3.14350625140665
Merged-chr19-11810979-1	1.58527930930836	0	1.52344067655434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124835386-1	1.23881734283469	0	1.65679225317586	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78605393-1	2.28993610402661	0	1.65647199783067	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-32001853-1	2.659056895579	0.0321335169280745	1.28332410266124	0.0250392842006465	0.98002362916129	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	1.39949824061849
Merged-chr12-79725894-1	2.13364937749864	0	1.39955680967324	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-79820712-1	1.61034522680906	0	1.5123755971611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-54423552-1	3.44873828121222	0.246600057213111	1.05591736997414	0.233541055602818	0.815341293022448	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.03956264035389	1.18909650862134
Merged-chr6-120981770-1	2.87483227585897	-2.07424583375759	1.32753290932448	-1.56248166745116	0.118174561299556	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0
Merged-chr3-135669636-1	1.08021796780427	0	1.5678205083047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-35718260-1	0.94446629928026	0	1.680919817068	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12438473-1	3.33339687731774	-0.70527650168461	1.26292025327743	-0.558448959745742	0.576537848359163	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52497320336197	1.73694414934445
Merged-chr8-68205591-1	1.89693827584695	0	1.4656557618087	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-77597836-1	1.93756923042905	0	1.54707168791986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52034250-1	0.890353279183028	0	1.82053159714205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-8511695-1	2.21659972545742	1.13749372636701	1.38589216920948	0.820766399896645	0.411779340799851	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.67591700901439
Merged-chr13-105022465-1	1.07091545626566	0	2.45119191531155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-66676746-1	1.61168731064721	0	1.52140747664793	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-125122751-1	2.21513011213536	1.91640931724789	1.2391494978828	1.54655214768053	0.121971276200537	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.24876900881727	2.86684216541749
Merged-chr16-33937781-1	1.69842277584329	0	1.63788714794689	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80172845-1	2.40432286880258	0	1.4373658295769	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65864894-1	2.20546314482086	0	1.43732896496806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-98747067-1	1.52951056574407	0	1.55077860891332	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-64414673-1	4.11992807628736	-2.80330804200428	0.98429372860529	-2.84804013328061	0.00439893768286435	0.112263780987241	C57BL6J_F1_Control-BALBCJ_F1_Control	3.44100413654379	0.879366456215217
Merged-chr13-83131523-1	1.03225293590868	0	1.86991562650676	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-79118749-2	6.90184369859182	0.296332007711811	1.06635930447567	0.277891332187997	0.781095777859811	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.41346904493103	3.35592922384307
Merged-chr11-76033553-1	2.30284658655634	0	1.47534890133865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-83675771-2	3.07464296598741	0	1.39035599654598	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34465068-1	1.99900978820319	0	1.43733021673238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-108692739-1	1.98251095128023	0	1.44766266794897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-76230363-1	1.30490164091075	0	1.76228503757113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76264594-1	2.54400745687015	-3.1893912436935	1.35795830273842	-2.34866655129385	0.0188407709396402	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0389482955368	0.577068348605183
Merged-chr2-146650040-1	2.31072687499399	0.945940238802303	1.19507354758023	0.791533074025135	0.428632983817487	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18208293037817	2.20216913186932
Merged-chr17-50122716-1	1.41271073398308	0	1.46646592292794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79130193-1	1.65265513966553	0	1.74678844978639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-94054128-1	1.73600655154009	0	1.59874102870003	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-63375271-1	2.65723176436625	0	1.45561566844458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-73033260-1	4.12105851288737	0.00439799514913882	0.913553618570012	0.00481416203684138	0.996158869274714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.75908667180769	2.76675494967861
Merged-chr3-138982464-1	2.69321593674923	-0.753667569043435	0.915278342674805	-0.823429916238289	0.410263556425925	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37850366884776	1.85774282263707
Merged-chr5-134704346-2	2.4799555839495	0	1.40067008218707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167050410-1	2.32502200835636	0	1.44856292706806	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-11476327-1	1.51991818944776	0	1.58424708649031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-162001500-1	4.39600148863575	0.632406631109784	1.15190267699333	0.549010470884984	0.582998264047893	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53995253633776	2.67216643268663
Merged-chr9-116102775-1	3.76982111057858	-0.29159369697604	0.961552178802607	-0.303253118659825	0.761696970806676	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99528851702169	2.37386910212741
Merged-chr11-19829854-1	1.74462315044532	1.81381974321763	1.73682256922904	1.04433220488537	0.296331717837019	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr16-20829173-1	1.4387401257465	0	1.54868263426241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66914034-1	2.1561552860798	0	1.47007637811467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-68199217-1	3.42049983622468	0.0144467851461115	1.11108543315021	0.0130024071192719	0.989625872419898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36436284074327	2.9286871554391
Merged-chr11-83630775-1	1.75216928837474	0	1.47253280281311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126910756-1	1.44213369533476	0	1.55597223669331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-64178834-1	1.30925424846298	0	1.59095161001723	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-145593847-1	1.29606605394187	0	1.56898073874731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24620012-1	1.68432891711066	-1.02300072425096	1.80161975979478	-0.567822770975544	0.5701553162084	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.42539729206526	0.601513806634888
Merged-chr2-71655964-1	5.41764644868992	-1.03255850682335	0.732270579471746	-1.41007782610661	0.158516703907714	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.09234664168005	2.29350574780863
Merged-chrX-169888378-2	2.07745630040277	0	1.43432005165073	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-31881144-1	2.10333309476881	0	1.42753883984936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-24953514-1	2.00518655772504	0	1.4787083556439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84050429-1	1.13347264713402	-0.649224201971798	1.73456741463563	-0.374285943857752	0.708191588543389	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	0
Merged-chr7-99071411-1	0.828646931657579	0	1.98823556681132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-169804675-1	0.929099986168654	0	1.79676338252384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94381397-1	1.6711753409822	0	1.61960013844762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-91323813-1	2.50139101782026	-1.5954197765591	1.36628552362251	-1.16770598017395	0.242925383755739	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.97566325357712	1.51226750748471
Merged-chr10-22298303-1	1.77953325051637	0	1.4466366831888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-33658986-1	1.95084568987908	0	1.43339027112864	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157503151-1	1.66977460808739	0	1.52866870090296	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104228043-1	3.34223977300843	-2.29635223003997	1.04949329466746	-2.18805802924886	0.0286653756233065	0.411524908928344	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26052545081215	1.06702908365212
Merged-chr9-120035393-1	3.87826797324069	-0.940794451435254	1.20506903355564	-0.780697557765117	0.434980397366675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93240605911337	2.43644614976811
Merged-chr8-70844127-1	3.86315113211559	-0.793465202688408	1.09129775599472	-0.727084059625104	0.467174463050136	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.7265364221448	2.50699023263474
Merged-chr9-32636185-1	2.2020167822279	0	1.48107695692103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61664461-1	1.75296654397048	0	1.43446749240627	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139075313-1	1.88792525820274	0	1.44468225542643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31194068-1	1.45229945458558	0	1.55561613362098	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-13851870-1	2.47803592631536	0	1.49266243296933	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-77425931-1	1.91329622630235	0	1.50210923525935	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-103142478-1	2.14047972854678	-0.479926205368615	1.14056797923656	-0.42077825618939	0.673917010790289	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61477032079243	1.10056930386922
Merged-chr4-12023893-1	2.31872393742557	0	1.51368027417149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-44408769-1	1.31346903288033	0	1.51454303709545	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-65943983-1	3.31296534805522	-0.0744941043562353	0.940462727072585	-0.0792100550205918	0.93686554697397	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94878297793229	2.06611709152988
Merged-chr9-62488811-1	1.79735659298106	0	1.51686051194736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-78399847-1	1.54531607648844	0	1.44923723156771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-72942787-1	2.86791386355113	0	1.45049213401139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-14622072-1	0.93273668275786	0	1.74694832338944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115322266-1	2.67870539381765	2.4438931752315	1.42298206798308	1.71744481551721	0.0858979292142019	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.51301315377886
Merged-chr11-49271470-1	1.92679592601711	0	1.42307312163477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44975455-1	2.02569887201241	0	1.47768525252359	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-22062141-1	1.40144601707655	0	1.61539948674709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40728408-1	1.19330423086576	-2.59177381893317	1.49175425403848	-1.73739998522995	0.0823165938654961	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.89200393807192	0.303163067301871
Merged-chr3-127356577-1	3.21966476948675	1.8215288713993	0.999388278328224	1.82264382212522	0.0683573539151368	0.722363413972185	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64536602019594	4.04197002962243
Merged-chr1-151690761-1	1.6864839604519	0	1.51875876482698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52944199-1	5.09347500657043	0	1.36545663444522	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111102609-1	1.14609885007098	3.34251030722231	1.68866644974086	1.9793786438614	0.0477733911252895	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.97993309388876
Merged-chr1-72317103-1	0.801007370113314	0	1.65585082549794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10976816-1	2.6960111970494	0.622731951779952	1.38463087002589	0.449745824147564	0.652893725551675	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr4-55617949-1	1.73650876489314	0.858036586177211	1.2686778215188	0.67632346969699	0.49883529487309	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.207189364431	1.7877231627864
Merged-chr17-67614599-1	1.5324425854559	0	1.61930551806175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-44359083-1	1.36473432185865	0	1.56317935941517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-65845569-1	2.54153834362009	0.618984181354138	1.38181780802344	0.447949199785997	0.654189859626006	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.977057525713991
Merged-chr6-122720113-1	2.41744072526207	0	1.42662216274998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64281688-1	1.27816834262962	0	1.53292857947061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-54040779-1	2.27603233235837	0	1.43479785928293	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53717633-1	1.13072307947507	0	1.61814015665188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139158498-1	4.30159635881665	-0.223742819191677	0.925915161432301	-0.241645054008586	0.809055208365892	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73531645649947	1.62069611143677
Merged-chr6-43261209-1	1.28208009517926	0	1.78616745778478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102663642-1	2.07305181451371	0	1.46132824129874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19549667-1	1.87996794001551	0	1.48695208711397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-110672286-1	2.26263478686523	0	1.45137957075856	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-55480642-1	5.5360425710018	-0.0764236508904496	0.752045832784229	-0.101621001751334	0.919057508759624	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.83076147239238
Merged-chr17-5672796-1	1.46760141140681	0	1.53337995962648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-38669770-1	3.0818071694406	0	1.39019699863763	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-125622653-1	2.23532526222204	0	1.42020314232566	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139168504-1	2.7448565226191	-1.48348725046096	1.08598785894076	-1.36602563117778	0.17193091861646	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18738482224545	1.86501351763573
Merged-chr7-97799723-1	4.14371577798049	1.08616392773816	0.983060651351939	1.10487987312322	0.269211644657393	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6950503635711	3.39893916195482
Merged-chr6-17410975-1	4.20227375407688	1.87624865770187	0.895911494708251	2.09423438451682	0.0362391061690905	0.477094108075949	C57BL6J_F1_Control-BALBCJ_F1_Control	1.27663763006505	2.83084128943041
Merged-chr1-118553242-1	1.51284699039563	0	1.65543277907708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-25562337-1	2.53278034644694	0	1.44878997114056	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-34269855-1	1.80328076035211	0	1.54020219428664	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-56747479-1	2.56970064941461	0	1.39698304493914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-29676121-1	3.96371517536267	0.419505568061905	0.96535481708547	0.434561013875132	0.66388109849539	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	1.95540490230258
Merged-chr1-176799063-1	1.51330294096118	0	1.6274651650729	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59776046-1	2.06203114592316	-0.990217858291281	1.46167262112349	-0.677455296063606	0.498117124477452	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	0.724326877898254
Merged-chr15-86236423-2	2.8507840197127	0	1.38591913627194	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49471558-1	2.17425492116513	0	1.40540111284179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-57548756-1	3.1926953262172	0	1.40199742515757	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-40306328-1	2.39772180953481	0	1.40858945355356	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-82866972-1	1.41567208829556	0	1.49723899660969	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-172976778-1	4.74025526063424	0.786772437944538	1.1233191749798	0.700399722063574	0.483677709800183	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	1.30064958020929
Merged-chr3-11682199-1	4.27736643649358	-0.709772111306233	0.999346499458608	-0.710236251080831	0.477557644312997	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.79495071635813	3.14698198213049
Merged-chr3-122191264-1	2.66896072978585	0	1.38533792636981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-51783853-1	1.85750972448657	0	1.48463913448585	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-90697984-1	2.06232827275229	0.723191673106803	1.06448793700753	0.679379867037126	0.496897203079723	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.9134233865196
Merged-chr1-77329809-1	2.30604365741963	2.16108346200675	1.25658564822844	1.71980594005151	0.0854677225151309	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.97908007631626
Merged-chr4-112055313-1	1.80119107568938	-1.48434527132881	2.36352841782432	-0.628020911504497	0.529990241169811	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.76071477186363	1.23107802440432
Merged-chr3-13712192-1	1.49780255962257	0	1.57191002141308	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-133904735-1	2.1624724814438	1.46224920595649	1.48639433067702	0.983755909032877	0.325235542900801	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.94927122251658
Merged-chr15-58259410-1	1.73483715612689	0	1.47411414498946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57100148-1	1.8388994781287	0	1.48574608418118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90445761-1	2.87851394045104	0	1.41538320068774	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167382503-1	2.17447301419435	0	1.50167144985996	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-18098292-1	0.868992065443485	0	1.82363219985071	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-110979818-1	2.84139536672919	-0.373121543240394	1.34211049670385	-0.278011046152133	0.781003879288765	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3493545969995	1.6630069827152
Merged-chr13-73620875-1	1.65571552573569	0	1.48507223474873	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140162753-1	0.930216179700476	0	1.83533916273743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133382215-1	2.48383480083197	0	1.50406190647014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16746109-1	4.22587316026277	-0.222521436598652	0.883061375673265	-0.251988641705676	0.801049843186115	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05402110133586	1.94919190003171
Merged-chr17-87242533-1	1.39241830675924	-0.50755502363264	2.42205674051715	-0.209555381235317	0.834014706947763	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80641832399696	0.94927122251658
Merged-chr10-19124593-1	5.17625628868534	-0.79747687302564	0.732821175217233	-1.08822847919104	0.276494255192009	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.62780606857785	2.29457836240096
Merged-chr14-88982134-1	2.45428477393612	-0.394067213022603	1.20908252796342	-0.325922510588561	0.744482983842856	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69469308021391	1.7092907815249
Merged-chr9-97307954-1	1.6465630277641	0	1.49948292671867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127598700-1	4.34803255571406	-0.996989011169729	0.809157136046207	-1.23213275488285	0.21789949758615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.54493961788419	1.82822317669445
Merged-chr18-34878599-1	1.59214376099432	0	1.64227548542813	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-16879435-1	4.55881117841422	0.262952159545302	0.785163828835412	0.334901010322042	0.737699759943931	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59864907237737	3.10757273364405
Merged-chr4-141248042-1	1.91536454413956	0	1.452095822959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157691688-1	2.52970355212162	0.441713268470115	1.38541392751828	0.318831260243907	0.749854472137711	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.67591700901439
Merged-chr3-122739611-1	2.28149491249128	-1.34413062812784	1.41143252276961	-0.952316604898895	0.340936439084479	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr16-52040185-1	1.68058472876981	0	1.53926016147828	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37342944-1	2.53204943181011	0	1.43588193228635	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-73132816-1	1.50681115770902	0	1.565684810482	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-64077237-1	2.30318723686283	0	1.45861788699924	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-24704602-1	4.21739204603699	2.06823122867496	1.02088125151124	2.02592733054241	0.0427722320473476	0.529746129382951	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69686753743604	3.83022345491476
Merged-chr6-134240584-1	1.78897948688837	1.77032715398728	1.48245935174858	1.19418259387629	0.232406550329769	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr4-40289263-1	1.28437910892079	0	1.59287240017471	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-119813989-1	1.82530211874525	0	1.43541953434344	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-57574716-1	3.68258287254731	-1.91644487720696	1.12824835703062	-1.69860196583911	0.0893942058170167	0.847612262068189	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58180101474665	0.601513806634888
Merged-chr7-44140637-1	0.945368598093528	0	1.67258487164869	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-126901907-1	1.66321284658049	0	1.48542296078615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-47357538-1	5.06903281663403	0.0882257993453689	0.936019244328062	0.0942563947055419	0.924905487628546	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.99823733561444	2.6679559536281
Merged-chr19-5819742-1	2.60703986069049	0	1.39630000559651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-12711910-1	1.33468138042277	0	1.51986740025771	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-14363313-1	4.82242259006051	-0.802026106648675	0.683658622754962	-1.1731382885463	0.240740354377045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.12145052561835	3.30861685798119
Merged-chr6-122969311-1	1.01531950394561	0	1.55311681953159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-19515713-1	1.405515749566	0	1.45959917818211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-68888900-1	1.47044669836954	0	1.4754340333993	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-155051842-1	5.10872885012536	-1.13684845661733	0.751786171045003	-1.51219655322614	0.130483867625081	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.33220783354933	2.95399403087158
Merged-chr12-25392071-1	2.9570680431472	1.54088690258024	1.41344907506281	1.0901608906651	0.275642277693825	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64290788048512	2.67166086585641
Merged-chr11-8575049-1	6.21214984420016	-0.13373494127692	0.699883121116425	-0.191081821009759	0.848461489950554	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34008614089274	2.97769544263998
Merged-chr16-32837011-1	1.28060493018899	-1.92157473023537	1.59030765536229	-1.20830376673098	0.226930440133352	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr8-10373253-1	0.780756252961619	0	1.74657996871164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115247363-1	5.56998541237981	-1.51503916046564	0.744985463403519	-2.03364929235542	0.0419869681501263	0.524562078067736	C57BL6J_F1_Control-BALBCJ_F1_Control	3.26459343480996	1.71465869101023
Merged-chr11-20132434-1	3.77983026150786	1.78521182607716	1.00597420360646	1.77460994494401	0.0759623140207883	0.769518342872909	C57BL6J_F1_Control-BALBCJ_F1_Control	1.35032549026822	2.93097927316131
Merged-chrX-23709866-1	1.65192051248568	0	1.57086889563328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-90110747-1	1.25118493435755	0	1.68172466509155	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-87966371-1	3.74406675485291	-0.807782541964461	1.24304993034037	-0.64983917560196	0.515796110711909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.16448544747254	1.41659105503593
Merged-chr14-64656141-1	1.82652920011281	-1.84225369746398	1.44788742526437	-1.2723735736068	0.203240418850325	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.918668513615376	0
Merged-chr6-128318566-1	2.17390979794315	0	1.4485192866105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-46026640-1	1.19317329966566	0	1.79900342404883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47718758-1	4.19029333033685	-2.92539183997919	1.21027158200321	-2.41713668525304	0.0156431416916438	0.27413495722848	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	0
Merged-chr4-105718263-1	2.64914845590573	0	1.44085785997002	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127633353-1	1.9910656545086	0	1.45746537706252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132551427-1	1.59973887594632	0	1.44961934164348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118455074-1	2.12305792698333	0.175792570268924	1.94534405433427	0.0903657992411444	0.927996533719306	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.13737329513592	2.45989369800074
Merged-chr11-88183723-1	2.11635837282521	-2.17899440872264	1.61263791185208	-1.35119879838377	0.176631759412895	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0
Merged-chrX-77740971-1	2.96250209545726	0	1.42504276583339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-149940797-1	3.1445091241543	0	1.42522755637066	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31720957-1	3.0092707301687	0.71743204798768	1.10475381375225	0.649404454691088	0.516076985403488	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47341853569617	3.05307577155024
Merged-chr10-8677454-1	1.44370591379429	0	1.50821729086883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-92493652-1	1.58784743030257	0	1.58737433214608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-102526933-1	2.40869801667849	0	1.50348941178796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-140531695-1	2.03148503969367	0	1.4118539310424	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27000290-1	2.4882537744724	0	1.42434510139583	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-115175228-1	2.9562006924017	2.28423109227909	1.32826849885294	1.7197058382787	0.0854859260515792	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	1.92835129883284
Merged-chr11-20083599-1	1.61751562891984	-1.77765284591868	2.34960468532366	-0.756575289887036	0.449304349958362	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0.303163067301871
Merged-chr13-111666270-1	4.38013990125193	0.250856869509782	1.02100458978674	0.245696123229161	0.805917473442506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	1.66432563910922
Merged-chr13-11907035-1	2.09578135226304	0	1.45359975696199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125293568-1	1.9957765043027	-0.49921599176528	1.24217885438836	-0.40188736911891	0.687766918826905	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.6342703608096	1.34263109599227
Merged-chr13-115130187-1	2.41921148862629	0	1.44865883244747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17837519-1	2.33098865799069	0	1.39648449888039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-36363809-1	2.05958341701798	-1.45991728627863	1.5986003904613	-0.913247172332632	0.361112559394558	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	0.303163067301871
Merged-chr12-111745852-1	2.18890071755975	0	1.46140945500493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-33356959-1	0.939877414506374	0	1.80157717116481	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99126874-1	1.75978129745576	0	1.5101492347141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-120359793-1	1.69426470111699	0	1.43087591844948	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157838899-1	2.22317651903441	0	1.4454716425254	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-35655278-1	5.9690070105786	0.207779649911701	0.765722909283153	0.271350964418994	0.786121112312894	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53388634203561	2.64463819182123
Merged-chr4-139858861-1	1.60822856152456	0	1.46796806170062	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-108632079-1	1.02993612997838	0	1.59338194490457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-48924057-2	2.43833235242845	0	1.41991547512449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-151021023-1	2.49121095212558	0	1.41313507432211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-3743877-1	2.53607595378976	0	1.45391423092644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52658669-2	3.92193239083956	0	1.4122056688011	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-108873961-1	0.969344234754174	0	1.76340899215038	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-38441808-2	3.57149433258951	0	1.39553168115382	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-86018412-2	3.31657857797486	0	1.45700749912253	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-60755473-1	2.27061010102887	2.42370968920724	1.90235959398815	1.2740544410566	0.202644122935911	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.09639038232885
Merged-chrX-23556543-1	1.61363549723612	0	1.52117293758726	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43631875-1	4.27329639680259	1.72951214421724	0.952814860391053	1.81516075799596	0.0694992083224754	0.728965280741381	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40000983364339	2.6336952994852
Merged-chr7-81225197-1	1.42453305333365	0	1.62368304297469	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3793369-1	1.8267378577555	0	1.48448332551386	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52042727-1	1.47550705035938	0	1.44157480769413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-148226645-1	2.26732149410689	0.283982311019111	1.33524291699827	0.212682132519771	0.83157490411293	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.08918047352118
Merged-chr2-126030373-1	2.49940116746805	0	1.45667841901348	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-70863024-1	5.6824293847567	0.515245718284103	0.830741421016792	0.620223941227661	0.535110361453372	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95880986522228	2.96704103014614
Merged-chr13-86106581-1	2.1646750537677	1.65154984353408	2.03516966098177	0.811504748325196	0.417075867173127	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.07982873328226	2.50448563865165
Merged-chr4-124682455-1	1.74230958977235	0	1.49333770315517	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30430394-1	6.07332712841876	0.373959042529485	0.927931859622197	0.40300269750598	0.686946240062286	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69486619385668	1.89774309831098
Merged-chr15-60855258-1	3.20703740518967	0	1.41507548972769	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-135996534-1	1.77047503620872	0	1.62392388844852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-137645066-1	1.55282665020047	0	1.84007835427903	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-99468203-1	1.97603167422958	0	1.54826301656437	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-25538951-1	2.50763983664941	1.06169004964291	1.3476870480886	0.787786787109584	0.430821430944411	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66210910851734	2.81173704134638
Merged-chr16-91962664-1	1.65253624732475	0	1.55294298827824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93255511-1	3.11869170434559	0.315337164428451	1.30350711736215	0.241914417058639	0.808846478684911	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	1.38572824442771
Merged-chr4-114092201-1	2.3921789173751	1.8609509872078	1.94621465919732	0.956189996007587	0.338976253235637	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	2.90596849162704
Merged-chr17-81544652-1	1.26372306029037	0	1.47023971357425	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72294714-1	2.07611869929506	-0.711121744858369	1.28149717133527	-0.554914798693943	0.578952939137658	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.37038362634479	0.815775955292901
Merged-chr2-18987748-1	2.95643677135816	0	1.44002372053082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-94343452-1	2.60869761552591	0	1.3902703126937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-37473526-1	1.47150220002735	0	1.49353073139165	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-189868270-2	2.28917667830552	0	1.46781814420021	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62120963-1	2.42318942565898	0	1.44356898208029	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103210530-1	2.10964457514276	0	1.51135415333486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127459112-1	4.79006489878545	-1.39627468206845	0.981675224960978	-1.42233871912572	0.154927943765475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.75745726092843	1.83714816185828
Merged-chr7-81851838-1	4.31801963036158	0.509897978517053	0.941334790307273	0.541675484394463	0.588042081167755	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.30806904914164	2.22225685747394
Merged-chr6-89268443-1	1.22130646531396	0	1.51232518729049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52034584-1	2.09888962773216	0	1.44913990046622	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124425186-1	1.80432452458442	0	1.52724979547617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130360117-1	2.82132120625047	-1.46196298990271	1.01492284250463	-1.44046712585056	0.149735284299532	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.20411427276889	1.44075340970692
Merged-chr6-33682063-1	0.983884125695116	0	1.67050040679269	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30693870-1	2.00187800259896	0	1.44232369502896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96042970-1	1.30165149137256	0	1.92476210785665	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-67016706-1	0.706144087247913	0	1.77902957747821	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-105562650-1	1.86092812770841	0	1.47002073202722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119847785-1	1.1351348743632	0	1.6383779452908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-138605316-1	1.06681721662308	0	1.68833999044789	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-45473025-1	1.25748907996438	0	1.54511547152186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88145795-1	0.613961501915366	0	2.41599410231845	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-95072191-1	1.18789611955257	0	1.67930718655019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-123018595-1	1.48455706963128	0	1.45779018521615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62328590-1	1.96452086282381	1.85333173203419	1.46075149010557	1.2687522447095	0.204529442391791	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr9-85378055-1	2.18060360957663	0	1.48434201684107	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172470884-1	2.15282824381452	-2.75078136546461	1.77530951931836	-1.54946578922237	0.121269789300717	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	0
Merged-chr2-15029162-1	1.93340752390689	0	1.49838239735418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-76592675-1	1.76852178798051	0.959635259211765	1.49775808202624	0.640714458982268	0.521708218294581	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.577068348605183
Merged-chr15-84889587-1	2.39759993680155	0	1.54401916070631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-92772182-1	3.02418975954237	0.699751232737256	1.15639377049146	0.605115014101006	0.545102578865242	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	2.00484654695269
Merged-chr4-59406175-1	1.97011546382572	0	1.42234527444258	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40496489-1	2.37927546264801	-0.135303811303901	1.31909152471711	-0.102573482407082	0.918301489777574	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	0.723581231604105
Merged-chr15-84622593-1	2.50401365080341	1.94435571178527	1.17224339648247	1.65866211541021	0.0971838974504313	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	3.43511251055346
Merged-chr13-19833211-1	2.99311370788957	-1.81328541969621	1.04142217486403	-1.7411626749094	0.0816550677973911	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.43049365066179	0.97908007631626
Merged-chr2-49359009-1	2.24501028594218	0	1.43387096019095	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-70174763-1	0.967671047745406	0	2.01846833800409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67451062-1	5.15730995358355	0.640972018500743	0.816394330353094	0.785125514313065	0.432379981720141	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.58303346135974	3.59636248610469
Merged-chr16-39466695-1	3.39566144227137	1.98641302525996	1.1107850835914	1.78829645320539	0.0737281917949171	0.756586153842261	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	3.40829182829196
Merged-chr17-67203429-1	0.950788827041218	-1.22698026533148	1.55227350877978	-0.790440768583362	0.429270400962313	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr15-75019699-1	1.79739194471741	0	1.55037333780985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-49962425-1	1.68318685358974	0	1.46355963284413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-99094097-1	2.98870552626514	0	1.39159400004643	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45837672-1	1.44354460020693	0	1.60436158084564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52624994-1	1.29705528175984	0	1.62942315353163	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-52973476-1	1.18172764584276	0	1.5472464005731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91080330-1	5.09506565544053	0.539064934282284	0.9629081866122	0.559830045872677	0.575595367492945	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29358708977899	1.3626301568499
Merged-chr4-105071197-1	4.58389548883105	-0.86345422069146	0.843587023888397	-1.02355085633191	0.306047467304867	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36453465698696	1.54671377011021
Merged-chr7-97311692-1	1.92503099335197	0	1.53654389960883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-61198706-1	3.59473618552607	-0.0400192356092991	1.18783749099004	-0.0336908339001356	0.97312368831277	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.06559681884521	2.03824006400677
Merged-chr8-11113057-1	1.56028423110601	0	1.58736556150557	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86192075-1	4.09696136219843	0	1.41746980475266	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-62127917-1	2.61620082964356	0	1.40042631404747	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-52056393-1	1.65049851782305	0	1.5028175739092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145987351-1	0.961633742073374	0	1.64710635032345	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-32170785-1	4.43700030094558	0	1.40347249979582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-102605163-1	0.922845430294326	0	1.63741218776179	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88546735-1	1.22738106902994	0	1.87631654240719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95841545-1	1.5798311207133	0	1.53360671624255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46871272-1	1.23052950535379	0	1.58092811831693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-53194281-1	1.29483956138393	0	1.62924319381608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105267309-1	2.39470354710105	-1.82223831544825	1.30741291175612	-1.39377414668532	0.163385817552103	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.81534621159246	0.465515277017237
Merged-chr16-64819284-1	1.80109560614979	0	1.48170932282551	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58299693-1	1.70160261685175	0	1.45413973966176	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-25645684-1	3.66907802795188	-0.981103246706247	0.822516925036548	-1.19280615005296	0.232945300946097	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.27127412584984	2.32937334132141
Merged-chr4-84837098-1	1.56827382701001	0	1.47708081694426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-27605872-1	1.47791456202779	0	1.45898823499485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173678763-1	1.28506741327124	0	1.62812656119699	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192756787-1	2.62115140693375	1.05761497049066	1.51015820753836	0.700333889000032	0.483718812508441	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.30064958020929
Merged-chr1-128463749-1	2.77703943080316	-0.042384228406767	0.953767744197549	-0.0444387311949062	0.964554689099924	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	1.91540923488129
Merged-chr2-11508747-2	2.63892791084696	0	1.4189676162971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77032592-2	5.30761822364756	1.0486674378527	0.701943978020841	1.49394748112158	0.135189346796568	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24910369072486	3.44367998116214
Merged-chr8-124743079-1	4.00780825509532	0.506162627018798	1.14599690671103	0.441678877189527	0.658721596912742	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64500873683875	1.87939799956443
Merged-chr6-51939272-1	1.66323307643069	0	1.43531749421896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-41281207-2	4.78239465841018	-0.19935872842865	0.857701544890271	-0.23243368234128	0.816201190440518	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05066483796074	1.74198052282805
Merged-chr4-57902848-1	2.09931065092308	0	1.41887724098927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-49111506-1	0.993146475339469	0	1.53394774881858	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43761348-1	2.51169758005093	1.83356761601047	1.41128827600006	1.29921550911431	0.193869980491434	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr4-138553010-1	2.09410390716346	3.32208901688653	2.17091470049607	1.5302715560991	0.125949525809882	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.29502753908958
Merged-chr10-124399130-1	3.36868899801384	1.88467600528587	0.861506819699109	2.1876507094211	0.028695055046896	0.411783130225506	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0295486026821	3.84971663445236
Merged-chr13-23724968-1	1.98100432443375	-1.0370576002981	1.26268838068056	-0.821309213076901	0.411470161207478	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41959898789419	0.67591700901439
Merged-chr17-5422002-1	2.27805937567709	0	1.50112173276466	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-93293204-1	2.64009773600831	0	1.45593260614971	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-30112648-1	1.95481093357969	0	1.46224184862851	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-42118788-1	2.03894011795025	0	1.78179283485367	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-129316741-1	3.33564064137236	1.15993242352766	1.31062006530722	0.885025686872697	0.376142777488054	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	0.724326877898254
Merged-chr14-50968655-1	4.81342837511906	0.153594972487851	0.844290612620114	0.181921923792561	0.855643998890543	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68807364458303	1.75648227519025
Merged-chr7-63755174-1	1.16397218285827	0	1.57395564505285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131977955-1	0.892298059468585	0	1.74042867868619	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137819860-1	3.14187371508457	1.018438459475	1.17735520939639	0.865022256110062	0.38702657331793	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11349282353426	2.7947746195691
Merged-chr1-85800006-1	1.33445072416504	0	1.54457293491788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-57375333-1	1.44675562870168	0	1.46448607796167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-12095389-1	1.62498539812574	0	1.64581899526377	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-55152243-1	1.70068113371922	0	1.52989723331283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-39301487-1	1.96848858088556	-2.63388571590192	1.52808193651095	-1.72365476809171	0.0847701851170751	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	0
Merged-chr3-108788322-1	2.25719480399789	0	1.45105574205458	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-65167065-1	1.84219829581868	0	1.47255714156187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-78613766-1	3.35537183025918	-1.62307009102293	1.27320122735204	-1.2747946327373	0.202381940942983	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.3257008870488	0.94927122251658
Merged-chr9-25104824-1	2.14213804432409	0	1.41852603860403	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-53786532-1	2.78371861662136	0	1.40385199308922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38281071-1	4.79814559768278	-1.51543967560151	0.996759800446273	-1.5203659647219	0.128419023569506	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.1327297878542	2.43647206672967
Merged-chr16-4458166-1	1.96986815168537	0	1.51950191364421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10606323-1	1.58875249183336	0	1.56433783818082	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-15536444-1	1.59224078960982	0	1.44027611839011	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121781986-1	2.22702020466913	0	1.43984430285285	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132828186-1	1.92720047078667	0	1.54561722886317	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-102045327-1	1.2771339681918	0	1.48321393104173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-27596572-1	1.36166369963484	1.54424842562628	1.5244621094712	1.01297921150821	0.311070090668423	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.5130538207841
Merged-chr16-30184997-1	1.05262563535045	0	1.57946095561733	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-126683268-1	3.13089394044423	0	1.39599421597208	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167702394-1	1.67594242967736	0	1.56694818797399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-75489837-1	1.98956630502855	0	1.49369358039475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-45586607-2	2.63357170036894	0	1.46028811197984	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30447892-1	1.63481876315514	0	1.48185598008944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11012922-1	1.7759720819472	0	1.44343737438081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-84912456-1	1.81675255374654	-1.92136403828546	2.10156643868037	-0.914253293601288	0.360583766535155	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1603440843445	0.788686275880602
Merged-chr14-120521047-1	0.912068514081941	0	1.80507617785614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134721246-1	1.28995643061646	-0.13041282292979	1.30956724678615	-0.0995846706229406	0.92067406439246	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15307255889252	1.03838943879457
Merged-chr11-31820817-1	2.63701856733087	0.0148531045757945	0.881590704052832	0.0168480730428668	0.986557818586974	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.19193974227778	2.68076355596708
Merged-chr3-10211964-1	0.917946544902126	0	2.06651883661514	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-94758165-1	2.3070302992153	0	1.43181722031699	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-39768411-1	1.67704870564655	0	1.4690232792912	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-45058297-1	1.94825358905668	0	1.42870436424722	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134399953-1	4.18881568987368	-0.40986146393784	1.09119323714299	-0.375608508178586	0.707207964581058	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3383215370264	2.6692439381586
Merged-chr4-118143917-1	1.40774521034343	0	1.47997990421427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-38845986-1	1.28948688157396	0	1.62263773086006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26559098-1	1.61603613727828	0	1.58011834871989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-46151831-1	1.14862920486328	-2.44557572713586	1.53349469448123	-1.59477286484071	0.110763037115296	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.775524153257	0.376242425970964
Merged-chr13-77044579-1	2.76930111175055	-0.520597744353511	1.04329727967166	-0.498992717125986	0.617784514716394	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24287124256397	1.82415053547332
Merged-chr16-44962117-1	1.98568029408501	0	1.4931480272994	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173773615-1	1.0157840617329	0	1.83874232627736	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134638093-1	1.61331975067859	0	1.49165980185372	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-23522800-1	1.28754938145499	0	1.73952887855267	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-59299906-1	2.34888801311049	0.573929021830758	2.45093997478345	0.234166902386692	0.814855408796586	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0995156753045	2.11139041490431
Merged-chr11-73006575-1	2.77702397776255	0	1.46871103270456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34596694-1	2.12338680913575	1.90294936709246	1.38480018240212	1.37416891712965	0.169389248022929	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.28067447403188
Merged-chr6-67059097-1	1.18899004578816	0	1.8397569994487	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-33993060-1	6.14245478674133	-1.11605340851468	0.923206262646229	-1.20888847235036	0.226705695483166	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.30746937643262	3.19419154367683
Merged-chr13-6102492-1	1.51118682141928	0	2.4352974038896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-130196593-1	2.04781924340076	0	1.40880844578908	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-38726235-1	3.06012826159033	0	1.43186531445383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-21268344-1	5.99297886550388	-0.944296721926559	0.644369277974073	-1.46545894443551	0.142795745715617	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.63855117189402	2.9220913379402
Merged-chr10-116849012-1	2.06020604463097	0	1.41429381848384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-75051300-1	5.83988084165724	0.16658980023998	0.683166218218469	0.243849587109862	0.807347314307065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.74214509909115	3.78227383420834
Merged-chr8-119676594-1	2.24416543967143	0	1.44561138211695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-156535879-1	3.0531075147285	-1.61213227390008	1.35419319297364	-1.19047435939331	0.233860001976381	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.3480509837169	0.903978167044898
Merged-chr8-122889573-1	2.73098257993292	-1.36247464561946	1.19147727557555	-1.14351710565467	0.252823956725249	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21043983090998	0.730937814817307
Merged-chr3-69214829-1	2.6188013640113	-0.227526341686122	1.4373331672744	-0.158297565843817	0.874222326135992	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.577068348605183
Merged-chr9-16267523-1	1.74816673637817	0	1.56005956116647	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-54013366-1	1.55167538285767	0	1.54813801135814	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45472881-1	1.37171973461751	0	1.63722653304782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-46146622-1	2.28554939936219	-1.4991272754543	1.37909220997142	-1.08703918752856	0.27701949143481	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73801320314375	0.577068348605183
Merged-chr6-32610361-1	3.32163608217445	1.02085748497172	1.09720730289748	0.930414409634224	0.352156560652801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.0995156753045	3.24566588868984
Merged-chr6-100192866-1	0.833295843361478	0	1.67353810850195	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25231125-1	1.97159668718917	0.811411633918152	1.57435371925449	0.515393474791917	0.606278091299664	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.08186277552917	1.45526469271556
Merged-chr7-49074624-1	1.16267884903608	0	1.50922799213707	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-53816118-1	1.50346241454098	0	1.53113363672225	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134347265-1	3.30768863830404	-1.42730769011667	1.22510004540625	-1.16505398515708	0.24399714124496	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35950768455674	1.18984215491549
Merged-chr4-59416597-1	5.04946253715283	0	1.37739104634015	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139300730-1	4.6041735492486	-0.839153096205588	0.889010023934674	-0.943918598905753	0.345211246928963	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.69817054966362	3.10056221433138
Merged-chr8-125375332-1	5.96019748710379	-0.170917665343112	0.669939116475901	-0.255124176420978	0.798627191785776	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.74833268732204	2.52901355174448
Merged-chr8-41191638-1	3.85592430161575	0.454100150101912	1.05371086400368	0.430953277236331	0.66650234360861	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.825079211029734	1.58059388295115
Merged-chr15-73134704-1	1.72630292434576	0	1.4883619572648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-50705022-1	1.15664885009534	0	1.87343182975091	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-88828414-1	2.10373455324052	0	1.4199296997188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131217487-1	2.36971496580919	-0.264733711871854	1.51087780145018	-0.175218480023834	0.860907964000191	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	1.39949824061849
Merged-chr5-113805499-1	1.17905109957877	0	2.43327946547489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-157031016-3	3.8275823549218	0	1.37509054358026	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-153480573-2	2.54694101227887	0	1.4239170335805	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-128400854-2	2.06587244414053	0	1.45529163936276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104001245-2	3.10158971138695	0	1.42355038536044	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-92413180-1	1.61762768605272	0	1.44720582682275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-49393571-1	1.58224882453014	0	1.45013845949906	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-48532492-1	5.79836995774133	-0.885201920681984	0.799400027927211	-1.10733286184297	0.268150041453516	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.11933673955518	2.24992080272587
Merged-chr6-136945622-1	3.61438537735373	1.64388490044927	1.19540563813416	1.37516910411692	0.169079024372974	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.60340856582165	3.30713527232733
Merged-chr11-119404824-1	2.74825581133894	-1.24154614620994	1.2295751671818	-1.00973586597034	0.312621854115879	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.56112970471021	0.723581231604105
Merged-chr4-144974651-1	2.48879097907526	0	1.48277964125602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-131100925-1	5.66989921682378	-0.328399858194968	0.822562559865682	-0.399239977866964	0.689716388739293	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.4360226934973	2.66320599947928
Merged-chr10-59921071-1	1.38002184636587	0	1.53001907739717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-124448627-1	1.63904696467828	0	1.53403210987693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-49042521-1	4.37827892450138	-0.394724515305757	1.11134723311284	-0.355176585269528	0.722457304911672	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8367926637908	2.81099487747951
Merged-chr8-25070709-1	4.85385179183932	-0.423372141903387	0.882812889782203	-0.479571772006904	0.631531922282299	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15258675016244	1.90221032624646
Merged-chr3-65435047-1	2.00686514906023	0	1.62609307939862	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-142761293-1	2.20084516212482	0	1.4742023445434	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32835906-1	1.85656259158611	0	1.48056814104584	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39304348-1	2.1185184112559	0	1.45106690692505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-25415283-1	2.75394417514143	0.0497304866842524	1.23191899877539	0.0403683089015495	0.967799495478143	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.869764003783424	0.724326877898254
Merged-chr14-9638212-1	2.35631467441983	0	1.42987182811978	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-50154992-1	1.52123570326082	0	1.45006118866238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-47895752-1	2.26502449392542	0.284378233996912	1.57383947753296	0.180690748997276	0.856610320495425	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24953473907626	1.80983313002686
Merged-chr17-6153782-1	1.79149687932955	0.60085026733167	1.59070912741593	0.377724787628356	0.705635051798803	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.41385117919798
Merged-chr1-173935054-1	2.97791497922316	-0.803161567659386	1.11515626974733	-0.720223335014171	0.471387498683534	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.45547307112966	1.15716269587666
Merged-chr7-122207498-1	2.10733307108695	0	1.51915917749516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-25894132-2	2.9254009839194	0	1.403340957686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-25535407-1	1.05513736229468	4.19239483104171	2.41899459875319	1.73311458950862	0.0830753037243753	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.49895324106153
Merged-chr2-103007774-1	1.75384487249419	0	1.48667846732637	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74792432-1	1.02389277323257	0	1.87317229033506	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-31765878-1	1.14647603697237	0.702437082280982	2.03244521083456	0.345611817005659	0.729634463970432	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.724326877898254
Merged-chr13-10344588-1	1.29408879393869	0	1.46657382552615	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-55191902-1	1.25107754395198	0	1.55156839968818	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-132516460-1	1.79529339809356	0	1.50505042300416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37046433-1	2.56126925364377	0	1.39732525052925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-74009651-1	2.31790571926133	0	1.46152866468113	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-80413968-1	1.02319337743848	0	1.85381240636103	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86146438-1	3.03494017497633	0	1.43267310719105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-58317589-1	2.02564025878065	1.52221959103694	1.56066170195022	0.975368069284172	0.329377716572294	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.02748994520012
Merged-chr6-89415394-1	1.08607277117479	0	1.93666998687685	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5814323-1	2.14524820880215	0	1.42573913071617	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-11297897-1	2.18951472511677	0	1.51396801261086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66242095-1	2.49116500388555	-0.0240293270578567	1.35183901686774	-0.0177752874107255	0.985818119434903	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0.601513806634888
Merged-chr11-70597491-1	3.36427730333188	0.854975992366944	1.03075547988631	0.829465386360347	0.40684111536542	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59652745948425	2.36227151597399
Merged-chr19-36840528-1	1.57733650937882	0	1.59632701744146	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-106093324-1	2.06512196223338	0	1.52345487878957	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-100507834-1	3.36364723334304	0.00399594621800001	0.906824905429939	0.0044065245606653	0.996484113464514	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.44662439339204	2.88646934604252
Merged-chr2-112401986-1	1.6490457929975	0	1.59215896047264	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-40600595-1	1.36842970774552	0	1.57698922797611	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-46606687-1	0.993178348909976	0	1.56893658898677	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-59194164-1	1.54433965586832	0	1.5020141835031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-69234332-1	1.43198660392002	0	1.62090576072261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92962758-1	2.40638797644747	-0.695433802597126	1.35278400324935	-0.51407600986315	0.607198849376445	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.465515277017237
Merged-chr8-94093536-1	2.37612272991845	0	1.48667754081085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-80210567-1	3.72431447085448	0.932571603752683	1.06561306919549	0.87515030615827	0.381492127999774	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52589952658819	3.15548436387449
Merged-chr15-27643129-1	2.25737526326805	0	1.41557809621054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-68612047-1	2.14087265894462	0	1.47891356619525	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-111799313-1	3.3265276077502	1.28510545076363	1.12000966908502	1.14740567535768	0.251213996699718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.57664565284388	2.8592490113817
Merged-chr17-81591854-1	2.3998261019375	0	1.43454229215715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-128824400-1	2.19001076563307	0	1.42239120781314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-64618834-1	1.90220587019163	0	1.44911756181794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132736253-1	1.77341241313755	0	1.47540036206594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-106328977-1	3.99813774266487	-1.3005516812376	1.14014277273199	-1.14069194871204	0.253998138204035	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.37307834666163	1.67656321522231
Merged-chr3-142588110-1	0.93078264257098	0	1.56204818683987	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158116255-1	1.94116784072031	0	1.46984360820934	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-118865169-1	2.0901661461713	0	1.44255592662135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-7774211-1	2.29305654023636	0	1.4037059285904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103371921-1	2.09671929856134	0	1.53796855524738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-181255876-1	1.91988307490142	0	1.5092006752857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143922591-1	1.00290651008293	0	1.65259458755763	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-179648693-1	2.84617236985234	-0.12684272353583	1.00743950354512	-0.125906045067201	0.899806297487804	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.27668708544805	2.08973793870974
Merged-chr17-26235254-2	6.29811240473138	0.801436526696955	0.569257207191648	1.40786364506605	0.159171449965528	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.86829497697038	3.90318131124908
Merged-chr13-28860408-1	0.738273410985933	0	1.99624285494351	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-42055007-1	2.88313894356685	-3.1080006048164	1.86783556895124	-1.66395835719174	0.096120751569681	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.8185216861781	0.55634759613363
Merged-chr13-47173382-1	2.2326444782682	0	1.42177811266937	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-87085242-1	1.16110962924732	0	1.55633229841516	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-59237957-1	1.57352847494099	-3.50466000459381	1.57311592749777	-2.22784598600333	0.0258907871036799	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.95160684218358	0
Merged-chr4-81105171-1	2.41565721259278	-2.32489729796357	1.57739762770433	-1.47388157375837	0.140513479756104	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18950583898258	1.27336184263348
Merged-chr11-118534902-1	2.20248851044785	0	1.46130677621795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-95281925-1	1.63422604315821	0	1.51560740685416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118802037-1	2.22447455013787	0	1.41157630188981	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-26747604-1	1.75177570379369	0	1.5691412683448	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130661663-1	2.19564846666887	0	1.49949525552349	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-69924206-1	2.60772023849268	0	1.39385406554679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-29681864-1	1.56537494921232	0	1.65634472531686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-4236432-2	3.23106174622976	0	1.39641328442815	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-133632672-2	2.01895054011433	0	1.42133668777564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-92635854-1	2.28866492968665	0	1.51129495024874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-86768010-2	2.73881435904425	0	1.4281700829682	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82987968-1	1.59497227904913	0	1.54776110231865	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157502783-1	4.95906164235412	0.0079528251404704	0.882452868350141	0.00901218118916564	0.992809417105955	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.77110564661746	1.71762629844815
Merged-chr3-138223191-1	3.44912062467262	0.466396888119075	0.95292075935669	0.489439319628146	0.624530704622309	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.84231959469675	2.02782580180638
Merged-chr16-16535464-1	1.70628854831929	0	1.47424434180288	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123580873-1	1.42801117080536	0	1.50043069041418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139364410-1	7.20968090651442	0	1.355466392396	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103208591-1	1.51516019423771	0	1.52136827114846	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-35103653-1	2.10386289473695	0	1.47463099270456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-34957280-1	1.28011395796734	0	1.77294487668001	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-134067260-2	2.71091941315654	0	1.47337223038237	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-39102343-1	4.07698170187479	-2.05276668932145	0.979879909858987	-2.09491660015446	0.036178406924162	0.47652581099843	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09717297272874	1.03838943879457
Merged-chr10-37235704-1	2.31659711786133	0	1.39982285797732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-5429243-1	1.96602597046012	0	1.48407855178968	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112913961-1	1.24018222725924	0	1.54629436236807	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-35482446-1	1.2393433470623	0	1.57832074087748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10921775-1	4.76610274146139	0.852752571580023	0.807533286840786	1.05599680592257	0.290969674138873	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.55833441760924	3.41656695808982
Merged-chr3-83881796-1	2.03383570385378	1.84110777383549	1.38771517746961	1.32671877034061	0.184601729444188	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.723581231604105
Merged-chr11-53785479-1	1.61686196067993	0	1.46234885805795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129788326-1	3.50911993476278	0.114052510676391	0.845433005160456	0.134904256138835	0.89268757440398	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.28083073713509	2.76159079903418
Merged-chr18-5187351-1	1.06505642418203	0	1.71651567621275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-72145407-1	2.16538801247814	-1.97203284842343	1.35631011349775	-1.45396899189803	0.145954903265904	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63732062367281	1.14143228603163
Merged-chr5-143312079-1	1.79046882911129	0	1.42720799038352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-90543300-1	11.7952432487594	0	1.39065603735402	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-69241845-1	1.71605409022317	0	1.51272086205511	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167793887-1	2.66830114906962	0	1.40653061750158	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120815869-1	1.38298797055042	-1.84428025857816	1.50064010973575	-1.22899571097225	0.219073414115254	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr5-49472768-2	5.27138015912669	0.422035959301732	0.696310683782854	0.606102949632962	0.544446392431262	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0451916841249	3.36821942342533
Merged-chr12-35897646-1	4.7913810452525	0.203684590709382	1.0603152958107	0.192098134879444	0.847665335855898	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.59147400027056	4.08627606675118
Merged-chr4-106875800-1	1.76563504862923	0	1.50067661236988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57583653-1	2.21838654671154	0	1.46107638110874	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-91545600-1	1.93740197304782	3.58687203782545	2.21463605466811	1.61962144085249	0.105313620951236	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.10436939698639
Merged-chr16-36942183-1	1.65337738238214	0	1.60404878496914	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-162531142-1	1.83540980485505	0	1.48222627659606	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-40358337-1	1.87648138295767	0	1.52115253229711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-45440283-1	6.37196421071801	0.727803235297259	0.712855891557923	1.02096825447661	0.307269479355833	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.628416560482	2.49279345794171
Merged-chr3-138454446-1	1.34515473124048	0	1.57828238120211	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-41708526-1	2.45404704180453	0	1.41297006775863	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-142665259-1	1.7919817492475	0	1.4528778014139	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-63066177-1	2.21794226740683	0	1.41648579967422	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-10565693-1	2.07321436852822	0	1.53904826238362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-61913128-1	2.03246675101986	0	1.48581135033765	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-105152115-1	2.56205699373146	0	1.43178331067803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42840789-1	3.36549967972069	-2.9612703117559	1.14818151802232	-2.57909595762917	0.00990592654874378	0.200102661190325	C57BL6J_F1_Control-BALBCJ_F1_Control	2.93666388734499	0.601513806634888
Merged-chr2-124670097-1	0.921436149770015	0	1.64130339579675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-40985047-1	3.6266970336893	0.485717799362424	0.953783826515259	0.509253549766136	0.610574512209473	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33086707361887	2.47825882472277
Merged-chr11-54127091-1	1.43641138365772	0	1.68576292062159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-10721698-1	1.64363473797529	0	1.74405172771077	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-5195363-1	1.94660960568121	0	1.44978553023034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-130967086-1	1.09776855334194	0	1.61430659172291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-117018827-1	4.16711919147146	0.276273719165222	1.03816171329097	0.26611819298309	0.790148184070889	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.18984215491549
Merged-chr1-152617140-1	3.1889112538271	0	1.41704190480444	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-80963056-1	1.2863212655567	-1.17958744118305	1.6954958620794	-0.695718266004125	0.486605284067264	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.413263464506793
Merged-chr10-12017479-1	1.03445752594807	0	1.65320922639051	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-49562758-1	2.22387056095846	1.78395629288793	1.55446010732265	1.14763723075568	0.251118353456704	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58492111464609	2.65683299213183
Merged-chr4-43924902-1	2.2247214227388	0	1.43424498605561	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-85186977-1	1.51657329580782	0	1.48676625753283	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-145306393-1	17.8543160512099	0.208578337183844	0.356875039000985	0.58445762350801	0.558912467841877	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.82853118669401	4.96698892732094
Merged-chr6-29276706-1	1.59066726137015	0	1.6631520709928	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-48578423-1	1.9344800594339	0.922222723983649	2.07755984679439	0.443897067709798	0.657117004668571	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.58458601743443	2.10460389575585
Merged-chr13-101541993-1	1.57864661125497	0	1.576757717942	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19256729-1	1.72948571602869	0	1.45769088745628	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-65740011-1	4.71977010630782	-0.383587165012411	0.751831595685118	-0.510203571137313	0.60990885056696	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36481291013395	2.1538399771309
Merged-chr12-32637909-1	1.75451772365608	-1.92224625441093	1.42508028850129	-1.34886874088512	0.177379130227941	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr5-64751420-1	1.43644953364829	0	1.52769663897108	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-3080921-1	2.1597650841004	0	1.46329254761631	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-58955742-1	1.98921605735446	0	1.48979392010007	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-27753373-1	0.913375777426775	0	1.63905400213069	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155525488-1	1.01610055480288	0	2.02508342815455	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132035973-1	2.95260137784406	0	1.41227222203294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-104583431-1	1.3664047256942	2.53542665042089	1.62983240647178	1.55563642025594	0.119794573144309	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.23107802440432
Merged-chr13-75991360-1	2.78060215408309	0.371069536772398	2.00586776704484	0.184992023337151	0.853235292048829	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.59425606555387	2.81937544856457
Merged-chr2-103682347-1	3.8933604090616	1.26570601677377	0.926259935754208	1.36646957070767	0.171791625458795	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.87744667331019	2.64403178094453
Merged-chr8-68130202-1	2.5198932833525	-0.932505783964237	1.40309274260202	-0.664607374588023	0.506301651189713	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47209300585678	1.39284430389808
Merged-chr17-23664741-1	2.64444005706302	0	1.43112011716467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-93167478-1	4.61245159262864	0.0899162092948056	0.791869856359484	0.113549226015729	0.909595138686283	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84812292246362	2.41513066561124
Merged-chr2-73020026-1	1.28130353759857	0	1.65397152581904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53116501-1	1.99622471633983	0	1.44960766239039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-67549314-1	4.0412973985265	1.30360503350094	0.933306768684341	1.39675943349109	0.162485924977449	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	2.39041776842166
Merged-chr5-72843842-1	1.69086787586697	0	1.5070647053399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-137610915-1	1.70391357589568	0	1.58854429562918	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-106529964-1	2.24097464105998	-0.703948475043153	1.43568086326831	-0.490323785078964	0.623904798680532	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	0.376242425970964
Merged-chr7-16183761-1	3.60839194124665	-1.47476143746968	1.38624853563483	-1.06385067292014	0.287396351694928	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64143129445672	0.977756232605852
Merged-chr2-18983587-1	2.28987493717307	0	1.42076237809715	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-119047640-1	4.21561490976378	0.133156859750798	0.904786908697786	0.147169304143054	0.882998388493378	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.92996439256142	1.6044622311735
Merged-chr19-26854657-1	3.27509174451924	0.0655034173717356	0.93659791373586	0.0699376076020269	0.944243319861979	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2524536714616	2.02913165216847
Merged-chr8-46794048-1	2.65746272538299	0	1.50598680601316	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-101291227-1	2.85269303034332	-1.03833978153542	1.02176551872401	-1.01622119997953	0.309524063167016	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.94051118279724	1.13341594473881
Merged-chr19-36390929-1	1.10013029048426	0	1.71218145447086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-94986446-1	1.74142414395332	0	1.44248435908236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172302549-1	1.98226399334425	0	1.4508670519781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-43569432-1	2.49724684518111	0	1.38877077964257	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-34198579-1	2.04782147621529	0	1.42542742242494	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-130884122-1	1.1628970128103	0	1.61167096798272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38566219-1	2.45543147160122	-1.53870634557686	1.23584770307411	-1.24506146004026	0.213109159382	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.39549090284817	1.49862868646755
Merged-chr10-121515978-1	1.3848826642916	0	1.45222553221796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-106045874-1	0.802453508042382	0	1.71390924991043	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-122241139-1	1.85755137561014	2.3650150751909	1.52545386532007	1.55036814220185	0.121053180456028	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.788686275880602
Merged-chr10-45122713-1	1.30766323626556	0	1.5404777207199	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-34012258-1	3.72260726863177	-1.62155818263361	1.10756678387459	-1.46407260152831	0.143174112445883	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.4314922584484	1.67023962132385
Merged-chr12-8376420-2	5.16012908697142	-0.263185217605727	0.804813704173696	-0.327013837166129	0.743657419546905	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.64254215594465	1.90216338684418
Merged-chr5-18006637-1	2.02689281696374	0	1.47207849787172	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38086215-2	4.5116132610309	1.7471204049666	1.22173221094539	1.43003547693538	0.152706837128427	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.14143228603163
Merged-chr2-57356387-2	3.29207722016462	0	1.47641237031128	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84706701-1	2.21006782699542	0	1.44492293584224	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-85114905-1	1.96002867805821	0	1.4494478508101	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67202296-1	1.9676625645539	0	1.51300838809831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-72380991-1	0.881175102437886	0	1.82931873610166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-116739460-1	4.39640374951969	0.398195054440442	0.989842748008955	0.402281125200343	0.687477143929431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.07906840187467	2.81873652192028
Merged-chr5-21568057-1	0.999707690745493	0	1.64246526169166	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56675224-1	2.09242042879456	0	1.45524989752061	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-82755539-1	1.59418648172854	0	1.56646905255979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87408855-1	2.77376804824973	2.44373016608755	1.40944717990112	1.73382174297514	0.0829497165094326	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	2.64850348086362
Merged-chr2-15098580-1	0.872002220339432	0	1.83134397389375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-115815276-1	2.50133391413045	0	1.48505254870616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18766604-1	2.37222114187325	0	1.39966022095093	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-111068608-1	3.93305140651548	-0.0385540042610291	0.845378609995156	-0.0456056065355734	0.96362460045462	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.80363332130919	1.78499181917437
Merged-chr15-58991334-1	0.849120207365832	0	1.65941983262803	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44601262-1	2.15382017952384	0	1.41656508896673	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-168250448-1	2.30392341101188	0	1.41822303828099	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-121604282-1	1.25920684401904	0	2.29258987544881	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-67766026-1	1.67361821573121	0.260959268677034	1.57126530807813	0.166082244249523	0.868092227129036	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	1.02674429890598
Merged-chr5-5719954-1	1.02638840665492	0	1.89748232201972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-133989054-1	2.12557398558329	-1.73104718748261	1.42352066419015	-1.21603235627592	0.223972596526411	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.40684701627341	0.601513806634888
Merged-chr6-28488523-1	2.33487909943684	0	1.46951639619945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-69066167-1	2.85352582775788	0	1.42925162046137	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-42697171-1	1.94527659703877	-1.58963032174453	2.17980686875052	-0.729252827180838	0.465847022122951	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24913491029145	1.38647389072186
Merged-chr1-172639505-1	3.6726680337109	1.29581951733621	1.18526667009275	1.09327255210408	0.274274150444792	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78466604272045	3.18806776357394
Merged-chr3-14592322-1	1.01598173099618	0	1.69047673015229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117964291-1	1.31769990354098	0	1.61557727838116	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-78900190-1	1.61348195764306	0	1.44830759422397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-112473994-1	1.6625324179271	0	1.54984107954824	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-47732901-1	1.10433874152915	0	1.80247855493462	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-144907500-1	1.5050473028152	0	1.46275684967092	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-70017697-1	1.56553217262906	1.61320972258482	1.50298432221732	1.07333769137717	0.283119629806039	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.609949614787909	1.79061031525623
Merged-chr8-3264364-1	3.36803030278595	0.865071332903948	0.853024418603511	1.01412259020692	0.310524259963508	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.85297260998396	2.44872188423148
Merged-chr8-108984583-1	2.08710824873984	0	1.44661202353231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-110968835-2	1.617533252765	0	1.47731833061543	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99233367-1	1.36879896544325	0	1.62356547199695	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-122057389-1	3.9765081069251	1.00282396902723	0.691024747089533	1.45121281582308	0.146720609316144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.52879699405213	3.82365563684869
Merged-chr8-34142993-2	6.75336859055588	1.06743269386067	0.753111615749864	1.41736320558254	0.156376764454673	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.17645330757991	3.78762610924089
Merged-chr11-120518665-1	4.1786397201372	0	1.38563452093567	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-141553737-1	1.99843509785471	0	1.46474812868785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-39549372-1	5.24162581760952	0.506261861697935	0.794091395275415	0.637536012491797	0.523775760201958	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36869737571727	3.11909169717413
Merged-chr12-41149220-1	1.00537803847846	0	1.74507454974896	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-34051643-1	1.79919797578412	0	1.50000252036583	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89973902-1	1.30801474044401	0	1.71973840208229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-20257141-1	1.35836058724192	0	1.5691884059911	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134248170-1	6.282131380849	0.183386743730313	0.685847419709304	0.267387087069659	0.789171140642635	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.72524396956073	3.95955222408046
Merged-chr15-83157498-1	5.64417154015081	-1.05901777408005	0.910389017224754	-1.16325851261737	0.244724632754878	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.57762704975293	1.60294768781932
Merged-chr11-35642512-1	2.28985862846467	4.50424766016801	1.33342479055558	3.37795404140587	0.00073027284560475	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	3.79695374459442
Merged-chr3-55693311-1	1.73447079005792	0	1.66921580703833	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-86283323-1	2.14158196117775	0	1.42815836557941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47629998-1	2.26030188887138	-0.215777037292067	1.115996999176	-0.193349119622533	0.846685560123543	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.58059388295115
Merged-chr6-38806524-1	0.849565435980344	0	1.71860613619563	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46449959-1	1.76487155728856	0	1.46867245988642	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132113579-1	2.30063855700178	0	1.47799112225748	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-57193820-1	3.23194666733597	-0.0833264169984965	1.07294686395727	-0.0776612708397974	0.938097502413266	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	1.54671377011021
Merged-chr3-146766774-1	2.02817165776186	0	1.56934461011564	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-55954320-1	1.94699293378995	0	1.49866791170955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-146414636-1	2.48468648515329	1.73059686498753	1.34710006323075	1.28468323343185	0.19890299963391	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.879366456215217
Merged-chr6-136838521-1	1.23625353798385	0	1.56108031268239	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-129544375-1	2.8299239293562	0.295246439165485	1.19471493968752	0.247127100664454	0.804809860765274	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62042974503458	1.78692381606422
Merged-chr2-129631741-1	4.77086483920144	0.321746108752062	0.817785072091814	0.393436025836308	0.693997465803767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6206607351343	3.41613098343371
Merged-chr10-60351942-1	1.94391953137198	0	1.4355011276639	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-41194890-1	1.65336715527796	0	1.52607109072526	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22566352-1	1.42456694911936	0	1.57169143210175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54626686-1	1.47212240412791	0	1.59855547752369	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-53721805-1	1.83164531310267	0	1.42428702067026	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-106055991-1	3.6936251745329	-1.2130373447024	1.2784358165806	-0.94884493141539	0.342699485887006	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr11-54442515-1	1.67584380225023	0	1.49178781736609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-64190550-1	1.48402182451623	0	1.4669897862515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-65282942-1	2.21118021405116	0	1.48779802629393	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99917861-1	1.7896814114373	0	1.46782858556756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-165983600-1	3.28847357712582	0	1.38367709624168	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-30322511-1	2.45418895158337	0	1.39550312696796	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-17948295-1	1.57575976422604	0	1.50245523643086	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-53474797-1	0.979993991667174	0	1.58044977187493	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-92250642-1	2.47501663076927	0	1.48222122303868	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34612266-1	4.12631936505691	-0.350234348844741	0.953291049945329	-0.36739498274407	0.713324413521381	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.21527596580555	2.442913959243
Merged-chr9-50885417-1	1.40791437104681	0	1.45856473684785	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-124761761-1	3.43419968851123	2.33940206145687	1.37742430567302	1.69838883474168	0.089434398010941	0.847700861635003	C57BL6J_F1_Control-BALBCJ_F1_Control	0.887107926668329	3.36254275042161
Merged-chr6-29929709-1	2.67329114755194	0	1.4681871037397	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-81743196-1	1.88071795065269	0	1.50021472496449	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-123185066-2	2.8737576727633	0	1.41965883054465	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-75636925-1	2.28332112187341	0	1.43204285727405	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-136136250-1	2.90457635788516	0	1.40124175459366	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167204564-2	2.36904685640423	0	1.42894277949089	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-11662302-1	1.56040374688665	0	1.57855126650895	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-41762472-1	3.05681511537469	3.03370038200778	1.27487294022824	2.37960998800764	0.0173309700894169	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.986577844696341	3.37332772669201
Merged-chr15-67692724-1	1.2437864946449	0	1.95190469714272	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36915855-1	1.84978778735692	0	1.45377609322829	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-6706381-2	3.05296402700119	0	1.47003141184839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96090248-1	3.81723200336574	-0.510924941354514	1.06499376351633	-0.479744538284969	0.63140905406699	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.24476717970129	1.53935718689701
Merged-chr5-100662692-1	4.509718985345	-1.12819444725179	0.77626909869112	-1.45335483423732	0.146125259860888	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98030565572904	1.67689200618025
Merged-chrX-60356784-1	1.25924376213112	0	1.61846242656115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73341096-1	1.45791035930986	-1.20790353703674	1.55818835640953	-0.775197383594919	0.438223034001962	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0
Merged-chr15-78516042-1	3.8457088458574	2.20149255358086	1.24787018376324	1.76419998027499	0.0776983160693467	0.780414405619663	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.13743241080208
Merged-chr8-71387245-1	4.36552104921226	-0.508465532688471	1.57520686161661	-0.32279286300635	0.74685211842289	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21003394305841	1.21389156331856
Merged-chr3-142263884-1	2.09687669848166	0	1.5572813563039	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-106618814-1	1.76071146943591	1.24740258473899	2.36092609980385	0.52835308349661	0.597254294348855	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31495854024319	2.757952308748
Merged-chr8-84955852-1	3.44613002160421	1.32639775160568	1.09877395339888	1.20716162546689	0.227369905811484	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47878878667606	3.79650980244697
Merged-chr2-167271682-1	1.88434051268937	0	1.53625222494164	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167205378-1	1.8950278476443	0	1.4787384886697	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53862109-1	0.942208272503157	0	1.60761647828897	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-94506102-1	2.9222000800702	0	1.38078751524052	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-52010708-1	3.00230456066007	-1.31339225860021	1.19049544437511	-1.10323165435514	0.269926578175492	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.69017997474274	1.02674429890598
Merged-chr18-75214717-1	2.7219967616681	-1.26339522403669	1.00251655339773	-1.26022380354199	0.207588638215188	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47429076154865	1.13341594473881
Merged-chr2-92007633-1	2.0134391811265	-2.52154249153162	1.38483571792457	-1.82082427460105	0.0686335730815482	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.845523456341755	0
Merged-chr6-82916059-1	4.75131140288087	0.176137445607992	0.894764309248734	0.19685345491248	0.843942218479957	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.30281892590853
Merged-chr2-122138126-1	3.89213305242598	0.931085123398955	1.19244035724216	0.780823223353776	0.434906473216211	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.25298535761957
Merged-chr3-87423882-1	1.92028537684091	-1.28607630143963	1.50428598040478	-0.854941359683197	0.392583612135173	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.303163067301871
Merged-chr10-7296890-1	2.41850181518301	-1.92221367207737	1.40970737112008	-1.36355509764419	0.172707632390362	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0
Merged-chr5-43276636-1	1.93604123449858	0	1.55312419013488	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-57427369-1	2.28171696394691	-1.6497374968752	1.27259571281422	-1.29635632138581	0.194852752925586	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.3480509837169	0.67591700901439
Merged-chr2-6309613-1	2.67709065601737	1.14408427576458	1.28675168136034	0.889125922536244	0.373935408711393	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	1.18909650862134
Merged-chr1-88272947-1	1.96408251382024	0	1.44751486798976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53818939-1	1.74435272615996	0	1.52516001420574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-143919082-1	1.76499111167771	0	1.50036274839459	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-160653149-1	1.38283085460894	0	1.69588115715961	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-32907525-1	0.966231075084184	0	2.00643342664852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-36019038-1	2.47508107577101	0	1.39359876926876	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-73646188-1	4.18071201878078	0	1.3737018929849	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-62287501-1	1.45361874576457	0	1.97152625586205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-50275633-1	3.03416163461797	0	1.39649774828402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-75159740-1	2.22037475191779	-0.725196056605767	1.12241682946645	-0.646102265724665	0.51821312814954	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20539659680455	0.904676873936758
Merged-chr7-89168759-1	2.41810436353402	0	1.41557501263483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-49135251-1	2.14435520450969	0	1.48347647189972	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63595345-1	2.01875006123876	0	1.49320837747533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-85663070-1	2.33514348715402	0	1.42439534664161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-17796105-1	4.43208373407974	-0.651722543610018	0.823333367864363	-0.791565809242634	0.42861388961271	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47394001682376	2.0616452534421
Merged-chr19-14508349-1	2.58528912894614	0	1.40111879685081	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171594340-1	2.47525465545537	0	1.44902938638979	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-40763151-1	2.10960198279598	1.82570843482202	1.41069698782039	1.29418893680552	0.195600167222138	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	2.5578269655395
Merged-chr2-173081053-1	1.66759249621248	0	1.63563547330574	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14100715-1	1.43902882077462	0	1.5033182444213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-121124905-1	1.30494578762397	-1.27103423896892	1.54614021025309	-0.822069195626742	0.411037516204343	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.688405034366054	0
Merged-chr7-118471375-1	3.85595899096567	0.458732607905932	0.965531709250222	0.475108796025102	0.634709429314388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30811930973386	2.33434016178782
Merged-chr16-10769858-1	2.22204289905447	0	1.45382974635047	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-52979720-1	1.55773473092692	0	1.47412561602901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27229615-1	2.08184941242065	0	1.45371521725294	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-109123002-1	2.64408616174127	0	1.40956060460306	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-11271009-1	0.938646759047068	0	1.7274729009034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-123280462-1	1.13362943282899	0	1.57641658786791	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-47454873-1	1.87351338641971	0	1.53028024939029	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-31151272-1	1.87740514763644	0	1.41339851242732	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37964240-1	4.54900415913595	-1.17654727508733	0.871065957718856	-1.35069826189565	0.176792109294831	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30243522796951	1.56533893459231
Merged-chrX-51065971-1	1.79316683956971	0	1.44215317008555	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-52794404-1	1.46361944762339	0.391227446873582	1.54081851723132	0.25390884292887	0.799565982957518	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.469435083901436	0.577068348605183
Merged-chr14-76875229-1	5.62031439217841	-1.40030259687188	0.889717862286562	-1.57387263561634	0.115516897351023	0.992630892049363	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36601290795399	1.62830504494315
Merged-chr10-94960995-1	1.80464844844894	0	1.49507822251085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115957545-1	5.0146692658623	1.05815726619942	0.802234981795631	1.31901162403933	0.187165226408609	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.99834080004871	2.65622196149644
Merged-chr1-51518842-1	1.2957415112694	0	1.49490555925381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-137369038-1	4.07189528307809	1.17660902661378	0.949646878254589	1.23899636123307	0.215346845626065	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.7727513274741	3.87309437432833
Merged-chr19-6283249-1	1.38104891244808	0	2.28433866704886	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-135628942-1	3.65096210366829	-0.673348241968767	1.15329727343772	-0.583846209886258	0.559323785412899	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	0.577068348605183
Merged-chr13-70618953-1	2.14644364793773	0	1.47536403443326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-18277635-1	1.68100206280871	0	1.43701243460407	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-82820846-1	1.06352513405164	0	1.78804124193956	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-9136658-1	1.8332605074338	0	1.43155171404339	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-112142794-1	2.1214153588611	0	1.46263729687304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-24854506-1	1.17920741725217	0	1.87527024530776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-104369781-1	1.28923757389524	0	1.54240375765286	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-158534291-1	1.99165983265173	0	1.42548550720822	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-136919558-1	2.4467293453928	0	1.40965681602848	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155070038-1	2.12229468390913	0	1.40033385528958	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-56692743-1	1.57628245443991	0	1.45625727708629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88232876-1	1.59424979952304	0	1.61600145290486	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-104189130-1	6.49296278750775	-0.457229380285455	0.773691496564442	-0.590971184659223	0.554539728281846	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.10004569325541	3.33712439280187
Merged-chr10-93941267-1	2.20341144693758	0.755172697702997	1.34012290774737	0.563510028324476	0.573087633310099	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.843323834477631	1.62805269464997
Merged-chr11-107625790-1	1.52504096513716	0	1.5568532153375	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96876539-1	1.49131319849762	0	1.47746214004329	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-58570590-1	4.22409454119229	-0.0359914544569213	0.981410434911959	-0.03667319316831	0.970745583012785	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.73775798795819	1.71450075940727
Merged-chr4-129086205-1	1.48920805368346	0	1.54373995212346	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-77792255-1	1.9227421651516	0.725518090832321	1.52497392127392	0.475757703598133	0.6342470060916	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15692263537643	1.53935718689701
Merged-chr4-40285851-1	1.86448478529617	0	1.50573004720191	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-53827790-1	1.49802297494651	0	1.50860217915832	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-77813846-1	1.83621305427018	0	1.46106590564875	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-171498372-1	2.69803768151712	3.08121779207316	1.33210540854636	2.31304352666468	0.0207202461421739	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	2.96245072032376
Merged-chr2-144730000-1	1.04067406525707	0	1.73946089979477	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-5777664-1	1.29480980011155	0	1.62884867778238	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-46442086-1	1.77384899443302	0	1.43268462421913	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125172635-1	2.4041434591032	1.66271696103134	1.37211649772378	1.21178993459348	0.225592802241353	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.577068348605183
Merged-chr7-139168880-1	2.70906283582474	1.3554052108347	1.10603055722417	1.22546814098554	0.220398886688034	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08628700317133	3.00768223784027
Merged-chr2-162922391-1	2.1731118141254	0	1.46271844875498	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-120473871-1	1.40925066057458	0	1.66208412100253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-41614691-1	1.51717863371813	0	1.67119694813573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99406057-1	1.60034637558816	0	1.50500251403518	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-36836656-1	1.51150058791677	0	1.51706824609352	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59109263-1	3.06342554175907	0	1.39011675233945	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67842526-2	2.73068347318895	0	1.39242821766699	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-149092807-2	3.81996052245835	-0.693596615872788	1.39010864113633	-0.498951373545751	0.617813640949559	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	0
Merged-chr8-43370112-2	2.95006064353703	-1.84634966148785	1.4691265814083	-1.25676690140474	0.208838054554741	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0
Merged-chr9-48413260-1	5.27257236069379	1.7736720794067	0.782619924239539	2.26632625169893	0.0234314152631935	0.359398505161381	C57BL6J_F1_Control-BALBCJ_F1_Control	2.15271387927268	4.16297832190212
Merged-chr6-38826058-1	1.55469813502255	0	1.55353964512446	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-86753260-1	1.01351158368549	0	1.71325758102412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123959943-1	2.96217743816674	0.332770083193875	1.23565465477603	0.269306704674851	0.78769367313464	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.05637383168099	2.87268025111496
Merged-chr15-59005233-1	1.40454561753112	0	1.50798908025661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74526684-1	2.01364415339387	0	1.44393563469027	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-78690419-1	3.24317147943211	-0.0966286280320422	1.14122655761543	-0.0846708546933446	0.932523067321904	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.958904680953568	1.39949824061849
Merged-chr2-161041418-1	2.22605834932606	0	1.4063631576481	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-94648728-1	0.58843318646671	0	2.16979570818187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-111326274-1	1.15524550250925	0	1.63187206690648	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-109466735-1	2.21690341286848	2.96200364046479	1.31062279847345	2.25999703645837	0.0238214347665558	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.2523031194678
Merged-chr13-23401116-1	1.08027635597646	0	1.67729005727175	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-23473312-1	2.72092080368997	-0.804942200408901	1.13560223424295	-0.708824072493587	0.478433657346386	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	0.577068348605183
Merged-chr14-76764762-1	3.50407481365468	1.77366144422714	1.34423354220991	1.31945929671659	0.187015609230209	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.67591700901439
Merged-chr8-36937740-1	2.38243340883576	0.221503092887671	0.985489161487622	0.224764615932769	0.822162394162196	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.72583980988184	1.93957782847288
Merged-chr2-69676892-1	1.90327668487415	0	1.49406283539608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11121281-1	2.558523345992	0	1.43600521680838	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-144338310-1	2.00723041455412	0	1.42949943322949	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-88252790-1	1.60002986189987	0	1.53903928114728	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-166026146-1	1.59294396340359	0	1.48351801155717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-134110895-1	3.32682313790742	-0.0404739944844832	1.26486855439044	-0.0319985775154229	0.974473185296172	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.11812572528152	1.10056930386922
Merged-chr2-166968728-1	2.84474793949522	0	1.3946074023106	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-163727582-1	1.20835676600811	0	1.55193211230831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-148903132-1	2.66361333558061	-3.4669279665333	1.20373961642129	-2.88013115065571	0.00397509775956855	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.29698610158585	0
Merged-chr1-24249329-1	4.96827839234133	-0.28638112680224	0.981004818097135	-0.291926320359707	0.770342958852127	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.6709456269636	3.01091647595868
Merged-chr4-109472771-1	1.57384902367307	0	1.53427372956694	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-59335078-1	1.46973960713	0	1.5240635297982	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-35293870-1	1.97849233563173	0	1.48994796448537	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132728637-1	1.8719776759784	0.5929948685476	1.65480601068284	0.358347059848366	0.72008360455631	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr1-138253116-1	1.42554797193185	0	1.45666751460325	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90894360-1	3.10990415397959	-0.276405106293761	1.21807231258948	-0.226920112572099	0.820485862398827	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.21171060354126	1.30064958020929
Merged-chr6-145822339-1	0.720347381751544	0	2.11353634294105	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-14639279-1	2.48679465363325	0.599893098277074	1.59876362467325	0.375223134313979	0.707494526336044	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.303163067301871
Merged-chr14-70859031-1	1.66773505836411	-0.0334456868377428	1.56417285768327	-0.0213823470171193	0.98294065538682	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	0.67591700901439
Merged-chr7-41599768-1	1.19349356484931	0	1.52876232391941	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-125398149-1	4.98002565066345	-1.0936309428211	0.929827408729881	-1.17616552550862	0.239528737716536	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.91096270096113	1.737158151675
Merged-chr9-62963835-1	2.06473893077244	0	1.44492779959251	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-56897230-1	1.69355906868025	0	1.54416247547529	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-62196966-1	2.69888240938473	0	1.40723744787327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140414361-1	3.35282803981852	1.99273632859156	1.31038402001491	1.52072697633239	0.128328366131134	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.961728545204858	2.36100561577437
Merged-chr11-45649453-1	1.30454542229719	0	1.5371950949115	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74840213-1	1.24728107979574	0	1.81536009068904	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-40723802-1	3.10786745933218	-1.01187038292132	0.970111093929832	-1.04304588335582	0.296927042637415	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.71020808893923	2.24670182487872
Merged-chrX-73363495-1	1.84126352493279	0	1.49108929056899	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-37543728-1	1.24323825042186	0	1.54835484734757	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-83608234-1	1.77162060316961	0	1.49618004047188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-20955480-1	1.04715571450482	0	1.62831497369322	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139253220-1	4.45229941222468	1.34091894140671	0.774843653491157	1.73056710907424	0.0835290022373322	0.815619369969308	C57BL6J_F1_Control-BALBCJ_F1_Control	1.66210910851734	3.69925140842477
Merged-chr11-11771740-1	1.36556057373081	0	1.55523240387033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36265493-1	1.23625963820005	0	1.64903700501475	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-167942415-1	2.59505703123059	0	1.39341420558206	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49097787-1	2.13589341855552	0	1.51920919966504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-45945651-1	1.1784519682476	0	1.53174225399447	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-84648268-1	1.14190238011479	0	1.4906256149944	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-49323253-1	2.77706503927018	0	1.38880251980541	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-127559534-1	4.12808770295061	0.444451644191815	0.897383424714026	0.495275076351506	0.620405961636329	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.90896656829731	2.32834156555516
Merged-chr3-103854750-1	2.97016136353001	-1.15778280514491	1.87905007872363	-0.61615324586312	0.53779338269432	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.03502929532434	1.09401177751657
Merged-chr8-124241116-1	3.92211735885239	0.810997498683417	1.03402795946657	0.784309061721884	0.432858783587083	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.6776376524744
Merged-chr5-92442414-1	2.78366765314682	0	1.42959043048985	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-75505486-1	2.76302691846853	-1.83978359596287	1.27807216054131	-1.43949899916734	0.150009193325413	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53825835672906	1.54667940924561
Merged-chr9-35110016-1	2.12646266129805	0	1.44440710529857	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-121089806-1	1.34826574690538	0	1.56234977327633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-96475101-1	1.3426764107881	0	1.53705871025782	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-68362418-1	0.999314931357011	0	1.58795567726014	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-57577181-1	1.32425691615121	0	1.61875618310701	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-60444830-1	3.26545343158782	1.77547326801915	1.26360609793304	1.40508444120633	0.159996170126052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.666688015277142	1.43496577401111
Merged-chr4-75318319-1	1.56074307885334	0	1.50970312013644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-8524037-1	1.66334939735417	0	1.4813578750505	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-25035551-1	2.60548855050327	-3.96622592123837	1.36211175889621	-2.91182121829153	0.00359328235501868	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38097024974186	0
Merged-chr5-28043068-1	2.62561266037929	2.92603844838376	1.35163911811529	2.16480746167202	0.0304024331589401	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.70266130792036
Merged-chr2-53001344-1	1.47995420936829	0	1.56893335178731	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-121394050-1	6.61183948595746	-1.32495104090254	0.781561207545721	-1.69526203208471	0.090025723957998	0.851375840054421	C57BL6J_F1_Control-BALBCJ_F1_Control	3.67284931279951	2.14752886985324
Merged-chr17-65728211-1	2.88376060610201	0	1.48059389913382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-30705668-1	2.22459757213525	0	1.45247336496794	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-88475258-1	1.12301688607336	0	1.61287604362474	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-129687375-1	2.5056524825621	-1.19742772641082	1.21148977906105	-0.988392759977611	0.322960331921807	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73372131812677	1.85324938956148
Merged-chr5-4537077-1	1.79315719990216	0	1.51632049647675	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-60730477-1	1.41593168400214	0	1.52893981463491	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-125509661-1	4.37306655774752	0.905881049855902	0.920929965733281	0.983659000752141	0.325283204853425	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.36155420913382	3.01966504370777
Merged-chr10-5264590-1	3.92166850133235	0.57357901242269	1.06738303140562	0.537369431166013	0.591012454419059	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15658857927843	1.5608848804954
Merged-chr7-30180977-1	4.82936188419734	0.529257034623696	0.91218397788885	0.58020865028632	0.56177392092805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.63882497122968	3.10493975236211
Merged-chr2-31768784-1	2.35074017265661	0	1.43452188181132	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-155533653-1	1.26712922163426	0	1.57982977800946	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-7391222-1	1.48016006279317	0	1.44689728140428	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-61257137-1	3.78541529609198	-0.581719138264972	0.832473963515314	-0.698783582141751	0.484687290295683	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.11086637835816	1.4068548238317
Merged-chr5-90908398-1	1.84051516949624	0	1.49729220286553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-192943792-1	3.62666033325841	1.08289585840907	0.941145058019537	1.15061525232659	0.24989055537952	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48233004913473	2.61290217134251
Merged-chr1-7099093-1	1.42067922112725	0	1.5121654397054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88757197-1	2.92262852259473	-3.50919447125348	1.14601914986393	-3.06207315267823	0.00219809726788935	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9868467483527	0.41385117919798
Merged-chr12-17564690-1	2.07509929867662	-0.910063935575687	1.25562194460941	-0.724791358961779	0.468580037691435	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.37317289713092	2.11639961854063
Merged-chr1-38039145-1	1.89088618073715	0	1.54082705316173	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-17749577-1	1.94054793798281	0	1.40585495215399	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167357569-1	1.83241085555402	0	1.44410757235135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25989480-1	3.76596666293567	0.467912250036189	0.901868704943054	0.518825243044368	0.603882613051144	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53388634203561	2.89577176413687
Merged-chr16-58702486-1	3.19352502235123	-1.93227481003957	1.20769908699468	-1.59996379135134	0.109606616218861	0.963782926405866	C57BL6J_F1_Control-BALBCJ_F1_Control	1.486851288245	0.601513806634888
Merged-chr1-131993370-1	1.70711739123786	0	1.467562373362	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80502562-1	2.00790953918092	-0.339076619347078	1.26969155662384	-0.267054323215865	0.789427335490923	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.1517642783294	1.14143228603163
Merged-chr10-61602516-1	1.33382506286216	0	1.62798068636867	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-32194237-1	5.97660294737489	0.568156384525964	0.551456006886132	1.03028415219218	0.302876636235395	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.43445235166372	3.9673018822448
Merged-chr4-89470118-1	2.33423418473487	0	1.46152577051891	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-23855418-1	1.78087740204625	0	1.44898852668746	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78499303-1	1.6205142409042	0	1.57088733535253	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-167318413-1	2.21899100859213	0	1.4518190186503	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-81434419-1	1.76391264633909	0	1.50295090584181	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-17467003-1	0.784124833576419	0	1.90183596520085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-104352315-1	1.90600112862196	0	1.44674675296754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-29244073-1	1.07424920906108	0	1.54794545304418	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-121550583-1	2.4107213625276	0	1.45274382521588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-26404709-1	3.63814432494861	0.0620531733485854	1.08820187439327	0.0570235861642705	0.954526406665786	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.39668277347939	2.12021133680407
Merged-chr3-101609522-1	1.79477650824462	0	1.49106675487522	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-38160235-1	1.32964988943435	0	1.85891344752507	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-103335539-1	5.1299042870221	0.720410670494865	0.808390269318435	0.891166924983218	0.372839625503234	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.0894787037384	3.04546665930614
Merged-chr18-7756982-1	2.44995330079504	0	1.41924087318291	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-115138774-1	2.34509806168875	0	1.50911716395779	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-90185098-1	2.76823006846305	-2.12981921675649	1.41826282959387	-1.50170981874099	0.13317206700632	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.0644347080784	0.730937814817307
Merged-chr17-31095502-1	1.71572669773438	-0.751804820156958	1.57427927093532	-0.477554925632917	0.63296701888764	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	0.765562747387088
Merged-chr1-54846512-1	3.72163635015751	-1.64758991035925	1.02529023864411	-1.60694976725624	0.108065387884999	0.956571401738133	C57BL6J_F1_Control-BALBCJ_F1_Control	1.86231980429102	0.815775955292901
Merged-chr9-78625964-1	4.44458619605852	-0.0351955724294912	1.36353067881659	-0.0258120869418482	0.979407221076353	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	0.601513806634888
Merged-chr1-23918495-1	2.76309992216864	1.18926161356091	1.46412336597291	0.81226872079228	0.416637454626279	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.32509503823899
Merged-chr6-114655453-1	2.10056450812053	0	1.44084193894718	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-19005434-1	1.3658628426137	0	1.7111560141413	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-70035865-1	1.15539647559722	0	1.65248027205415	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3753961-1	2.2977641260227	0	1.43406855637223	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97802924-1	1.65754816341621	0	1.47849580648034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-130264951-1	2.21637503307884	0	1.42886360377127	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-122591576-1	2.22334088057284	0	1.48828541347261	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-21916110-1	1.50217864556228	0	1.58556553583888	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-119614007-1	1.56521865484385	0	1.53361178294149	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-99219942-1	2.24643115496677	0	1.44517623085161	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-27957138-1	1.41117127091082	0	1.46966627577417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-97678776-1	1.23706047076173	0	1.90610469315049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12587778-1	3.02886892326984	-0.312434043311069	1.13975379007854	-0.274124153857421	0.783989212437788	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94640134381309	2.09965233491124
Merged-chr6-146586584-1	1.90573982662789	1.90585912400001	2.0867516382433	0.913313826653767	0.361077512469142	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	2.57201051220628
Merged-chr7-81318994-2	2.98912745711811	0	1.5427013871754	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-8420818-1	0.917697050617712	0	1.58413923607776	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-117941637-1	1.24654397824882	0	1.6764224560691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-99607802-1	1.00288747508562	0	1.61194202915976	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-46850314-1	1.25641579920702	0	1.53500262598186	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85051905-1	2.68539792499594	0	1.44374009041719	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-36238713-1	3.95729454467286	-0.796280552252195	0.947130451106937	-0.840729543983683	0.400499465585694	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.40111519105355	2.32066643467004
Merged-chr18-48927642-1	4.13303258358727	0.0731688959445261	1.24262941325592	0.0588823145211171	0.953045844575431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.81129108659853	3.06842981310764
Merged-chr18-55041083-1	2.11720384414377	0	1.44400895004706	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-91361698-1	1.5910572276225	0	1.45667464414085	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-58503075-1	1.05065592899093	0	1.4890473667145	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-133177576-1	1.63032445491007	0	1.47269366066072	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-118766555-1	1.68080927076283	0	1.59499944401499	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35029696-1	1.68002662854538	0	1.49175706988559	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31471546-1	2.18565357263284	0	1.40574015436411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140756853-1	0.808105524832303	0	1.85242562213058	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-24047648-1	1.27096703744884	0	1.48663661032986	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-139701437-1	4.74942576152975	0.55111637052812	0.802756573029579	0.686529875984975	0.4923790312902	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84917241302084	3.59535775050695
Merged-chr5-76118577-1	0.958927370243882	0	1.74608542340323	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-69530486-1	3.32735611339106	-1.97190355259306	1.11935269986916	-1.76164630935679	0.0781290744760132	0.782716247593365	C57BL6J_F1_Control-BALBCJ_F1_Control	2.48475512893435	0.990919527803163
Merged-chr6-136718528-1	3.29927784963316	-2.05166390033376	1.1647873415781	-1.76140641909285	0.078169639356178	0.782834087281223	C57BL6J_F1_Control-BALBCJ_F1_Control	2.88486980732542	1.38647389072186
Merged-chr11-61457102-1	1.83674480692582	0	1.50401479873998	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-82915176-1	3.2307486694169	-2.16444928053213	1.03947586479241	-2.08225063596294	0.0373195823054884	0.48592330019945	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46026986523757	1.27743081564928
Merged-chr2-167739217-1	1.80050771302184	0	1.47610096840035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-34609669-1	3.10354993213939	1.07119832798903	1.28879300191861	0.831163985523163	0.405880997033146	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.26501898168246	1.70863195646908
Merged-chr5-41857739-1	3.54607252563448	-0.954936146103946	1.24893277833277	-0.764601716498073	0.444508746728432	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.905469781553611	0.67591700901439
Merged-chr8-8225306-1	1.16576172318475	0	1.58025069368623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-75900380-1	1.58908685661571	0	1.48246466834709	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97397807-1	1.69350584420035	0	1.52166283747572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-92479835-1	2.7911203920924	0.699603561029646	1.86140823938277	0.375846386745139	0.707031100168754	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18210741161866	2.72635092201581
Merged-chr2-168112142-1	1.71562180268141	0	1.496935249799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-9062896-1	2.50033283753086	0	1.44994023539605	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-42394739-1	3.01617799794971	0	1.48371340887536	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-76668173-1	1.17409982050529	0	1.58505771676889	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53124165-1	2.81460173173478	0	1.38922017975298	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-117557411-1	1.31669410302236	0	1.51137743535439	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-89679578-1	2.63363395202978	0	1.45089860396844	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74646610-1	1.27139934488669	0	1.47225762196468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-12013684-1	8.44381597605816	-0.478556164400451	0.567651630483768	-0.843045520705388	0.399202985737948	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.81823535195718	3.16294450103693
Merged-chr10-12968464-1	2.12692255500436	0	1.45348227853248	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-139271446-1	2.2372270510698	2.15519356388229	2.00371510818741	1.0755987989889	0.282106724783549	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	2.77775226870143
Merged-chr11-72946549-2	2.67841156793348	0	1.48409871527302	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43725866-1	2.4325592576799	0	1.41929798633136	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-120700243-1	1.96127857086312	0	1.43945691464602	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-125450918-1	2.03743315294959	0.292324157516955	2.34852557887731	0.124471353493496	0.900942080569229	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76331258957479	2.04229173714305
Merged-chr6-119520844-1	1.66949014684198	1.89888702450388	1.52238729439871	1.24730877056739	0.212284302782964	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.2636608194585
Merged-chr18-60658682-1	3.20007535250703	-0.625870657071404	1.33685606753992	-0.468166074320276	0.639665831068718	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.16895159875229	2.36284387329087
Merged-chr1-51580281-1	1.47603480136086	0	1.5557341288523	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-77336590-1	2.72343450555455	0	1.42966043231162	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83730397-1	1.1703391069818	0	1.75184458664703	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-74529827-1	3.35968254386261	1.57776310703411	1.30399335464106	1.20994719905487	0.226299154330186	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.61242769162773	1.34503387201423
Merged-chr16-94066384-1	1.58642854413582	0	1.5195822913704	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-68369965-1	1.01803853278782	0	1.55717724564504	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-58734028-1	4.3978456396211	0.431461398677164	0.901991293860646	0.478343196451986	0.632405956175995	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.41695929335733	1.93887912158102
Merged-chr7-117481077-1	0.906027213308853	0	1.78369530595236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-5112822-1	1.42821213469405	0	1.61626536749762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-82235665-1	1.01526521682675	0	1.57823164984365	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-76317131-1	1.35674241957361	0	1.65031700283936	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-107978999-1	1.39932790904634	0	1.45849428659741	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-12781107-1	1.70478334540747	0	1.55614996124412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-84405409-1	1.45909502411163	0	1.55849745778634	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129066513-1	1.83257686960723	0	1.54000988855311	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101339700-1	2.33137669383423	0	1.40442399388213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-28384354-1	1.45981854549093	0	1.54520349349282	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-115096310-1	1.35257539460177	0	1.50784446417528	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-56745266-1	2.08179322148687	0	1.48363834864203	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-100629947-1	2.14127859302382	0	1.44951098272328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-60734451-1	1.51841690069133	0	1.44744106809705	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-71044302-1	2.18271238235488	0	1.53077846500018	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-92147752-1	1.97264191504212	0	1.44131196102579	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-21850461-1	2.96596543886362	-0.000664407374110812	0.966996444836959	-0.000687083574772433	0.999451786666842	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10356013656012	2.00683239531438
Merged-chr5-147056040-1	1.61594601005161	0	1.44041599861468	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-45160726-1	2.54211305745285	0.0831666513318504	1.09958231787941	0.0756347660193745	0.939709676389009	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.00098049458557	1.61881475415901
Merged-chr1-137923868-1	1.06917700615006	0	1.58980524918033	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-73513918-1	2.49231889595065	0	1.44106530761927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-53209405-1	1.41567203235942	0	1.47634441992901	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-120027508-1	2.42817115597339	-0.327673387738663	1.29956052511889	-0.252141690521636	0.800931546335155	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29684500016202	1.09982365757507
Merged-chr8-35988464-1	3.86541203727448	-0.0142865424583997	1.88845069436958	-0.00756521867422594	0.993963886397805	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79419538023548	2.78364309532047
Merged-chr4-118417518-1	3.89641672770541	-0.424518962656836	0.822103320975806	-0.516381520212019	0.605587970033013	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.21307952544685	2.16517866554277
Merged-chrX-53710402-1	1.24276010701894	0	1.70486294606594	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-65404840-1	1.24080464794843	0	1.61692269736426	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22356611-1	1.62123309042821	0	1.51566865100208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-115710229-1	5.12737449509279	-2.61831169854963	1.07241970853827	-2.44149904902293	0.0146264268552826	0.262748822678886	C57BL6J_F1_Control-BALBCJ_F1_Control	2.35287325867535	0.465515277017237
Merged-chr11-113865867-1	1.63835410286895	0	1.41582126745811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-38433923-1	1.7659921663311	0	1.41947870071383	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-98052163-1	5.0871595152651	2.83156849981048	1.00188300215867	2.82624667122764	0.00470969805302222	0.11808785814771	C57BL6J_F1_Control-BALBCJ_F1_Control	0.683637474991079	3.43831820665824
Merged-chr16-95893500-1	2.24000456229305	0	1.45569422126693	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96254481-1	0.968380579396894	0	1.76705103197409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-96374224-1	2.77265409071042	-1.5490901772806	1.4001060040046	-1.10640920962403	0.268549441095597	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20422395464686	0.948471875794396
Merged-chr2-75892248-1	2.58304554784521	0	1.52016706256042	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-63085920-1	1.96019503879573	0	1.41915929874442	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-114294723-1	4.36185348994934	0.63815786586333	0.838738971092305	0.760853957974846	0.446744301595374	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.76628008406346	2.56122006004787
Merged-chr18-36386574-1	2.46911023243021	0	1.45669732842159	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-116676970-1	4.51170517619466	0	1.40351303614756	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-58668197-1	1.98596208277075	0	1.43959291132497	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68778774-1	1.01843773821697	0	1.60413952585614	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-107599635-1	1.76441917286052	0	1.45465732225406	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-11787110-1	2.04707083505712	0	1.47312797002409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-68046009-1	1.8329527360706	0	1.48827030337629	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-35779151-1	1.8155405570077	0	1.56782090787141	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-3077543-1	3.50624782069599	-4.90221615866167	1.31011895282837	-3.7418099692997	0.000182699649199846	0.0096234207663318	C57BL6J_F1_Control-BALBCJ_F1_Control	3.46435260825227	0
Merged-chr11-85652304-1	1.31387390074753	0	1.497000051188	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-140567549-1	2.75197137893518	1.15702187661423	1.46724516300592	0.788567518085293	0.430364821848446	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	2.21726420133
Merged-chr8-82361020-1	1.20691037374132	0	1.54622156031744	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-47643424-1	3.05099602773913	-2.74777819649926	1.22978579868936	-2.23435512056465	0.0254597161868961	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48967077741001	0.303163067301871
Merged-chr9-13673478-1	1.09524768420021	0	1.60767857551548	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-88632000-1	4.64594226734735	0.453165284862279	0.809152319275517	0.560049417232129	0.575445731086656	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66223990676383	3.02464332330605
Merged-chr6-5324845-1	3.59925779909783	4.82112850878949	1.15318123990786	4.18072055106852	2.9058680586936e-05	0.00210894635250368	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.54656896686616
Merged-chr1-165612912-1	1.28037028275811	0	1.64614458952229	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-135549030-1	3.87757676206733	-0.488828286800412	0.835196181762978	-0.585285586158412	0.558355705052897	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.3869501380164	2.92062783385789
Merged-chr14-103350086-1	1.88506560170813	0	1.45486465603213	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-96460793-1	1.18084879263578	0	1.54804730725019	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-16305036-1	2.0607893469181	0	1.44308120988208	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134067157-1	2.33675375083867	0	1.4271560627054	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-3674242-1	1.99746111427096	0	1.48713983183995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-148993951-1	2.31994594587815	0	1.4363056796327	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-59340177-1	1.5109658648245	0	1.42591980391885	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-52444608-1	1.71076190453675	0	1.52405370317549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-33235879-1	2.19616718758146	0	1.40404112590242	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-74322621-1	2.34635843285244	0	1.44682841434815	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-96729238-1	2.05448374894547	0	1.44974359893925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33836146-1	2.21270808871481	-0.613780858975882	2.03414482044115	-0.301739017206636	0.762851022298997	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.40094721382228	2.21213269525289
Merged-chr7-110225861-1	1.5887738650981	0	1.49038649296064	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-77458440-1	1.22477084746164	0	2.30244601861489	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-96924452-1	1.83599334003069	1.81573093406097	1.60145097175018	1.13380363563463	0.256876925637827	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.20275690226768	2.71307136459934
Merged-chr11-65720148-1	2.29397113884836	0	1.41438265988204	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-16198395-1	3.20485021923885	0.396528363094682	1.94414782752946	0.203959985696444	0.838384768364119	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.09093093088911	2.34131617969248
Merged-chr8-122835258-1	2.36871629324071	0	1.39460492490756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-22358194-1	1.66621212039249	0	1.51604115908534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-82441803-1	1.56401266594102	0	1.50184940338417	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-63957504-1	2.20107078366283	0	1.5240507024636	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-45940640-1	2.92729952386633	2.99938297981863	1.24457114491096	2.40997309963603	0.0159536967708412	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.91199869800507
Merged-chr7-30176639-1	3.41825298594644	0.506277035116366	0.833457332293513	0.607442055519735	0.543557585899946	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.96789871560186	3.55318478826308
Merged-chr12-76345956-1	2.83086776255045	0	1.39564493629708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-24386416-1	3.14167407916305	-1.37690671919367	1.05254244302632	-1.30817215810769	0.190814923215475	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.20901305541235	1.62069611143677
Merged-chr5-8911725-1	1.95062612413057	0	1.43060040713467	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-92400755-1	2.65347861805749	-2.52760440222563	1.91722107805848	-1.31836877403062	0.187380228588831	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.1974551018134	1.17788344834821
Merged-chr7-101227637-1	1.52412339934746	0	1.51784067091798	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-31213116-1	1.12148083299018	0	1.66185040401427	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-88301349-1	4.31505425568837	-0.194375437637084	0.7626377652979	-0.254872557433813	0.79882153243615	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.79592662927084	2.28733524435458
Merged-chr4-139226158-1	4.30390579078033	0.321742441905523	0.988358043865359	0.32553227436408	0.744778260203675	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.97634481356229	1.97941593292252
Merged-chr5-25023164-1	1.77452008652521	0	1.46708306131983	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-157144857-1	2.85128641353797	-0.548740395721657	1.44654615916036	-0.379345237099222	0.704431511168556	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.793480537552656	0.723581231604105
Merged-chr1-171612557-1	2.96632635713633	4.03551215996068	1.21442264150213	3.32298824317793	0.000890586678777587	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.96227705878657
Merged-chr1-39896715-1	2.07559918664505	0	1.60327122163902	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-3292218-1	2.21943548926624	0	1.4153187272034	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-57180565-1	1.51317195302452	0	1.49535914760739	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-91207504-1	2.23305183149547	0	1.43821903186686	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-107795098-1	1.28598985741794	0	1.57268183670456	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-154874537-1	2.40792445095257	-2.26645647229189	1.92854503209233	-1.17521573755162	0.239908415588446	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.2378570496781	0.730937814817307
Merged-chr11-50259819-1	1.2919575856359	0	1.69595196833841	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-173214731-1	2.17015138423008	0	1.5340554431436	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-128769432-1	1.85765471926214	0	1.45350579509691	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-89336137-1	3.09447517566695	1.46138524432952	1.3115173995085	1.11427057306078	0.265163127257332	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.43116362910629	2.97087357660473
Merged-chr4-148494690-1	3.79658111811915	-0.0738677116224705	1.25737156187766	-0.0587477193393511	0.95315305040885	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18923496216865	1.58922372983786
Merged-chr15-4580748-1	2.17338995575179	0	1.47519107096319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87653279-1	2.16513629035298	0	1.47024480629331	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-19911025-1	1.71007247065655	0	1.51845944504205	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-71252475-1	2.02875259517677	0.308686522790789	1.03127151523698	0.299326140817392	0.764691210904738	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.68598010415578	2.00101204725338
Merged-chr12-80730730-1	1.19712953813814	0	1.57729200224572	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-127318528-1	1.48364306807411	0	1.59411401234656	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-5710706-1	2.01163188542516	3.31155324123669	1.34298991114185	2.46580649174134	0.0136705164930873	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.88412288135434
Merged-chr9-52174303-1	3.5784619492613	2.020694364763	1.29518483167492	1.560159071775	0.118722294872189	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr1-124103204-1	2.51680466371184	-0.0374460295146932	1.32470666371547	-0.0282674123565338	0.977448871380641	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr18-39481704-1	1.65153622695929	0	1.43241070786588	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-29491586-1	2.05498750597044	0	1.46070985122922	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132784024-1	4.48729061027804	4.71878939627827	1.18781369620334	3.97266794562239	7.10720925494693e-05	0.00439523080648077	C57BL6J_F1_Control-BALBCJ_F1_Control	0	3.50146549621504
Merged-chr1-4963370-1	1.89877182711834	0	1.52784773689262	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73322757-1	1.97855531881505	-1.95417862962948	1.361933070615	-1.43485658127609	0.151327970509521	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.15868211970568	0.376242425970964
Merged-chr6-124425786-1	2.36981118861093	0	1.41415528903878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-8980650-1	2.50597669061513	1.45874189994411	1.38524412054558	1.05305763677927	0.292314577008403	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	1.06702908365212
Merged-chr18-76331492-1	2.59400903788974	-1.34779813753484	1.07549759878713	-1.25318563152051	0.210138157816847	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.73780465134031	1.30139522650344
Merged-chr7-111663292-1	1.41594030565332	0	1.56652313392839	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-79974262-1	1.61140568344288	0	1.43477571188547	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-68271482-1	3.57569399841267	0.582553230528846	1.15568300788826	0.504077006023758	0.61420726450063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.42594657933142	2.90849902250956
Merged-chr1-170850038-1	3.15533425621776	0	1.38105086475035	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-10960295-1	2.86435325130757	-0.673380157485506	1.22955380079876	-0.547662214575771	0.583923861696772	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.34526607128738	1.83150711868652
Merged-chrX-12959620-1	1.33969721457936	0	1.57137922363521	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-3386032-1	2.90603830900765	0.937134008235124	0.940925554683402	0.995970407616835	0.319264523656626	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.65215194967867	2.24986710229783
Merged-chr12-44936885-1	4.20661471240897	2.83353789787189	1.17841569522535	2.40453170248214	0.0161932016139017	0.279976541517202	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.74644670820198
Merged-chr3-94841629-1	4.60737164629658	-0.448160558786905	0.910992824009676	-0.49194740833891	0.622756522655558	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.08355090189567	2.06936074991249
Merged-chr8-83751297-1	4.28387138455032	1.04902887034105	0.849804998707226	1.2344348079111	0.217040925242391	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.33380954640862	3.58707611723535
Merged-chr1-169459573-1	1.3062482845251	0	1.60590478771781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-29148747-1	2.09178363318218	0	1.41264761677361	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-39705286-1	1.86936298492256	0	1.53415713326591	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-38516437-1	2.31068752864873	0	1.41476685759236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-89758631-1	2.34589954390734	-3.41122329023111	1.70117395756597	-2.00521720607096	0.0449398314253965	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.02277216991188	0.303163067301871
Merged-chr3-144531224-1	1.50344692218584	0	1.55179135411319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-122409405-1	1.67775026927287	-2.23761128960307	1.76329687244662	-1.26899294416506	0.204443580602583	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	0.303163067301871
Merged-chr18-4370493-1	1.60491971181993	0	2.34275415357567	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-32556219-1	2.75511398530125	-0.186624365414911	1.1847479178096	-0.157522425327362	0.874833135658878	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30929522906377	0.993299420549897
Merged-chr12-112947564-1	2.19632508285133	0	1.51229580840955	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-129506143-1	3.13129572479266	1.61038832408103	1.35274467208401	1.19045992737129	0.233865671199695	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.62128842389662	3.10668998547451
Merged-chr2-132570943-1	1.04410399801555	0	1.71691658133398	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-111128655-1	5.67417711817577	0.392470037786278	0.899102076961033	0.436513325731409	0.662464333014298	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.95685815637649	2.24477058319332
Merged-chr5-110613604-1	1.1307682689436	0	1.5811336382595	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-59419853-1	3.02504748611868	0.296568098337845	1.10879594518415	0.267468599272872	0.789108387882507	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.897114879832661
Merged-chr5-16424924-1	1.80713249553382	0	1.46530106998587	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-150841374-1	1.67114595395576	0	1.59064246125513	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-132475251-1	1.85055901614224	0	1.48188108866616	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-5635751-1	3.11392760745493	0.47092281682098	1.08099948443919	0.435636486048176	0.663100494305667	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	1.25298535761957
Merged-chr12-78206755-1	1.93375509742855	0	1.46229039453925	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-124281635-1	2.31945956554427	0	1.4522401150644	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-21071254-1	1.08050912067202	0	1.74522454565326	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-99202512-1	2.32064013190416	0	1.4582524522125	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-62887140-1	3.29388007049799	0.804365006540247	1.15967099327647	0.693614836625029	0.487923786792388	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.50871668602081	1.82190623236164
Merged-chr1-138612598-1	1.190820820342	0	1.64691740467421	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-52793771-1	3.44994293456245	-0.393742897170809	0.905154036025789	-0.435000984914783	0.663561712532045	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47158896970822	1.84897751685564
Merged-chr19-5839492-1	2.70764819053424	0	1.45757939834683	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-118595112-1	2.12120306048204	0	1.42299119099939	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-86702111-1	3.45746354519134	-2.39395884133226	1.92769887857705	-1.24187385692696	0.214283107149063	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.18231844094686	0.724326877898254
Merged-chr14-27355800-1	1.47341676191053	0	1.51608630605679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-18840143-1	1.29718827482009	0	1.56591300758608	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-136201957-1	2.90941637122421	0	1.37910390269799	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-143472873-1	1.59225606018216	0	1.52396456583167	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-112621712-1	1.9468163876549	-0.0752152052318397	1.68416615582902	-0.0446602046784484	0.964378154094635	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.662147012823607
Merged-chr7-100497614-1	1.62984994731094	0	1.58969235378576	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr17-28879991-1	1.73993985836735	0	1.43144098922423	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69629906-1	2.10688928378293	0	1.45132540846966	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-33902966-1	3.66380686996299	1.04971262339876	0.999438977757596	1.05030186610688	0.293579347492839	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29606516661881	2.09070350854821
Merged-chr14-68609140-1	1.62632050785104	0	1.49502715413959	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-6983884-1	2.03411483027815	0	1.46335920106963	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-74190220-1	2.3690191936333	0	1.4468216345872	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-58346695-1	1.51064690326493	0	1.73064055823721	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-71636025-1	3.25081880671419	-0.97947603996152	1.11493766409122	-0.878502961652019	0.379670831185534	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.9679029645664	1.80983313002686
Merged-chr7-135557442-1	2.00544733288723	0	1.43927074337378	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-193463197-1	1.37823549438271	1.93215304700427	1.77862042968465	1.08632118171882	0.277336918920269	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.02186287315087
Merged-chr5-146734232-1	2.39882411081781	0	1.493333446411	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-55915592-1	3.67250217022971	2.39017127917238	0.965888871115246	2.47458206699557	0.0133392170158838	0.245798812802178	C57BL6J_F1_Control-BALBCJ_F1_Control	0.989878296978726	3.04010068833034
Merged-chr9-90200743-1	1.74460667015484	0	1.5553293601281	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-117433277-1	2.52786251069765	-3.53949775699224	1.96646352739292	-1.7999305391058	0.0718716068087127	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	3.32525312339942	0.600815099743027
Merged-chr10-80696703-1	3.84037952475552	0.535193186852571	1.12764617393472	0.474610918941986	0.635064322167869	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	1.97731223551783
Merged-chr11-31820544-1	2.63314773335648	-1.81271549648093	1.48057199278585	-1.22433458508837	0.220826035211154	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30670691456252	0.662147012823607
Merged-chr17-51111426-1	1.84617951580041	0	1.46113580116878	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-108932303-1	2.42829278078612	0	1.43123857595661	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-72092838-1	1.57824445992643	0	1.55647354623451	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-121253401-1	1.68619253893218	-0.551758957808104	1.45720639140479	-0.378641598789718	0.704954026895862	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.46928333126936	1.14143228603163
Merged-chr19-43584969-1	1.24523880562415	0	1.55881136235414	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101670591-1	1.38239511945196	0	1.50749781347216	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-36252712-1	1.95589169205071	0	1.48730445612609	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-37323132-1	2.44981869408292	0	1.40331824114384	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-65396258-1	1.88289990073353	0	1.46424653900221	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102226834-1	2.0310395959954	0	1.49703506037231	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-94470887-1	2.45156196868671	0	1.4167349698989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-117551222-1	2.43361333102928	-1.4206913842722	1.2775679411647	-1.11202804836901	0.266126090853134	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.34591112769102	0.465515277017237
Merged-chr10-7673847-1	2.3869635538867	0	1.46077593238079	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chrX-170677857-1	0.944366198748678	0	1.65200723281781	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-103986075-1	2.41563385929797	3.24409736500005	1.29196299567379	2.51098319058913	0.0120395429711397	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	2.35532669962609
Merged-chr7-46770863-1	1.4034717172981	0	1.58278017144784	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-44673823-1	2.9923060500433	0	1.42550656485623	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-55121523-1	1.55139516014073	0	1.46452404786246	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-120600482-1	1.79405301694374	0	1.48700756194265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-81312547-1	4.35036389049675	-1.1352171641044	1.05823472338009	-1.07274609216982	0.28338505381731	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.84647287135764	2.15466444879897
Merged-chr9-90251916-1	1.79472603130806	0	1.4648876680553	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-104442238-1	2.73082340136602	2.74866910279907	1.2843610866591	2.14010618302752	0.0323461865264136	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.735627456805112	3.73154638672159
Merged-chr6-8336995-1	2.02602449348908	0	1.45566613981252	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-30346844-1	2.96077400769828	0.707379972136833	1.35897333817345	0.520525276152656	0.602697515493798	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.729295484888209	0.662147012823607
Merged-chr7-101228246-1	3.84128957288943	-1.85736585801143	0.990627870903628	-1.87493801917483	0.0608012508862791	0.67245070130768	C57BL6J_F1_Control-BALBCJ_F1_Control	2.94640134381309	1.06702908365212
Merged-chr18-9507967-1	4.65506640718104	-2.28240192751825	1.1393197717292	-2.00330230735322	0.0451448499898683	0.550630514255841	C57BL6J_F1_Control-BALBCJ_F1_Control	2.51109349299861	0.67591700901439
Merged-chr12-21332326-1	1.82172642771831	-2.15079365973064	1.35820717919079	-1.58355344654566	0.113295374980854	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.53886770318549	1.25560888218618
Merged-chr11-100692479-1	1.60213313114267	0	1.58183961050663	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-107492676-1	1.77285865307076	0	1.46486579309382	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-22144333-1	2.56487485654703	0.600256225120587	1.19973121562002	0.500325587352809	0.616845840080214	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31470332505763	1.88925557974982
Merged-chr3-31087795-1	2.7300894255528	0	1.45796888974319	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150194139-1	4.35329510030449	1.95966775598998	1.16995393723963	1.67499565035321	0.0939350850797058	0.875218409686524	C57BL6J_F1_Control-BALBCJ_F1_Control	0.423054662900563	1.1442012793241
Merged-chr6-47780894-1	6.14887335754083	-0.0396187118415919	0.803488233680143	-0.0493083908150465	0.96067353275003	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.84476081090671	2.81222874524007
Merged-chr1-177705380-1	2.36195141383494	0	1.40719729523478	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-117073469-1	1.783425511141	0	1.45536029596752	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-31042909-1	3.72166193851547	3.63429465444802	1.21108068221668	3.00086914754189	0.00269210223888486	0.0780063889144681	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.737158151675
Merged-chr6-86822403-1	1.73917383679627	0	1.46752863434917	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-31928465-1	1.65459417697012	0	1.44492191954927	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-95343343-1	1.41217420674174	0	1.72192333948314	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-75883653-1	2.3918489676371	0.817450776306717	1.41866031110052	0.576213185010147	0.56447109425589	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	0.788686275880602
Merged-chr10-19562798-1	2.44690281311542	-1.34255496834675	1.39253302869084	-0.964109964134158	0.334990797643447	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.563523181795778	0
Merged-chr11-32567551-1	1.0108970799071	0	1.58165094993654	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-67756378-1	2.99686709236039	-2.10939609166666	1.11276706868675	-1.89563130598041	0.0580088146178653	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.31711242604998	0.577068348605183
Merged-chr4-59532112-1	1.39643146184684	0	1.53614877230711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-3184564-1	0.72887267161365	0	2.08499448873727	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-27352629-1	1.00749298492601	0	1.65707450201457	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-36769553-1	3.36121711744607	0.494281451666572	1.08657189611486	0.45489990440018	0.649181251690909	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.38713383244935	2.83069842619719
Merged-chr14-63127030-1	2.04826143813579	0	1.50516923997515	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-34218465-1	1.81214982400247	0	1.53974031230005	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-146376717-1	2.1805574900707	2.83239075831304	1.54114500523813	1.83784831971434	0.0660847592134323	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	3.1594905279678
Merged-chr6-34994836-1	2.10804949046406	0	1.43404914009249	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-191227826-1	1.96092181324593	0	1.47027655943241	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-37855524-1	2.03523551453623	0	1.42665127160135	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-124783442-1	2.59755858487414	1.85969803381465	2.07743186687439	0.895190866891181	0.370685066126399	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	2.83550072976473
Merged-chr5-43675277-1	3.00363070257689	2.06900799379656	0.988071598846907	2.09398589759195	0.0362612365251315	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.29948469469889	3.21085668221835
Merged-chr18-24074550-1	2.27554840402077	0	1.41910546258811	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-63868981-1	2.28018825183385	0	1.43816211449795	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-56694026-1	1.25630454957163	0	2.29796537426097	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-54569256-1	2.21914524908686	0	1.4433803852618	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-140081116-1	1.37023895586101	0	1.79833863762756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-19473109-1	1.30634060544855	0	1.53886333646402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-134946304-1	3.01733136087853	-1.43297860768248	1.24709577758432	-1.14905256952936	0.250534304466545	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.31734301959449	0.55634759613363
Merged-chr19-37072649-1	2.02108288201395	0	1.45211932351265	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-120823436-1	2.69258580082457	0	1.44104476533236	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-13237241-1	1.50751078059406	0	1.50217463616995	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-55147944-1	1.53414413925909	0	1.57606163082887	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-118668792-1	1.44726687494292	0	1.48837244137679	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30771210-1	2.59200137199148	0	1.39231652433255	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-86107594-1	1.20356227412986	0	1.55807240106444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-74834837-1	2.50127500545822	-0.113422908530193	0.991460436332784	-0.114399833189231	0.908920846223967	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.48967077741001	1.90363402565156
Merged-chr2-122449607-1	1.25803935985701	-1.71776866691325	1.6583586396763	-1.0358245953653	0.300283980952177	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19380919831911	0.376242425970964
Merged-chr5-117140005-1	1.98447738415092	2.02682419974254	1.34481893316275	1.50713538437167	0.131775958577373	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.662147012823607
Merged-chr11-96310338-1	0.944547003187067	0	1.65928681192328	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-37003395-1	2.93718536732478	0	1.47671940116919	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-76378715-1	2.1804508213005	0	1.42755478946304	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-30633453-1	2.16848412796823	0	1.45611222860416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr18-69407019-1	2.17175936923369	0	1.47954653491633	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-102504001-1	1.96176776991381	-1.47958008346231	1.36883659053209	-1.08090336983699	0.279740099497272	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.278467196053	1.14143228603163
Merged-chr5-30482510-1	2.15602794175406	0	1.40177089504708	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-103377956-1	2.25221591125888	0	1.48399729007672	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-105117005-1	1.96871879555323	0	1.49768575829698	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-15007131-1	1.16466004906432	0	1.70146492016756	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-51940301-1	2.01349779772006	-3.07398474348473	1.39687266552861	-2.20061915401677	0.0277629964612533	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.78481374055866	0
Merged-chr6-50221081-1	1.43926653421924	0	1.52211218517544	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-9082532-1	1.92140379221235	0	1.45406462496883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-155539030-1	1.53334272829087	0	1.85562456725989	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-77474183-1	2.46157684019648	0.368299574857776	1.86589720940573	0.197384707475432	0.843526495878433	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19604688794884	2.61212576380067
Merged-chr6-52270623-1	2.14927260613003	0	1.44463842434479	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-84570577-1	1.71788850994204	1.70634475662509	1.4633467672059	1.16605632708861	0.243591672527962	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.382164212378408	1.14143228603163
Merged-chr10-93768349-1	2.63206584973437	0	1.43042882235533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-97853638-1	4.411794791303	-1.913273212711	0.879022333637813	-2.17659226562875	0.0295110027636424	0.418946781962249	C57BL6J_F1_Control-BALBCJ_F1_Control	3.65520218850103	1.66624882212637
Merged-chr16-75876156-1	2.15264487976079	0	1.43475984844049	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91279141-1	2.35614768735312	-1.89994110096696	1.33420445444182	-1.42402545175269	0.154439104505121	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.73596151290311	0
Merged-chr5-64268009-1	1.33949099394144	0	1.50806036062275	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-59223036-1	4.34421461121082	0.375031883034555	0.900968345034122	0.416254228133123	0.6772239821761	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.354969417986	1.84197571055146
Merged-chr2-65283126-1	1.41082335019553	0	1.61667911437558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-93323821-1	4.61440869145069	0.0410059036895869	0.827840564502175	0.0495335762076915	0.960494080086777	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.70824109725134	2.72273146289852
Merged-chr2-150845928-1	1.68495481907106	0	1.55511863377649	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-123371951-1	2.02720288193405	4.147930106577	1.45368050698612	2.85339872595306	0.00432543122980078	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.94664334300064
Merged-chr1-37154327-1	1.57518040056743	0	1.64458241025035	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-41007325-1	8.29064348557535	-0.193105816268899	0.62451528066568	-0.309209113447256	0.757162461849192	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.53901644661592	2.72267446608857
Merged-chr9-104277742-1	2.63267235507746	0	1.40173888953409	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54106512-1	1.8149136154852	0	1.49786812952445	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-59127898-1	1.51974664222805	0	1.51242692739187	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-118297826-1	2.56079993973082	0	1.44148724070568	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-73318265-1	1.22203919420535	0	1.96101164031412	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-36661826-1	2.22205532944258	0	1.42278065736222	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-59667957-2	2.94857249316133	0	1.43109598451387	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-62148514-1	1.20773608931939	0	2.06065165169713	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-172316611-1	4.75460583415329	0.244647917624167	0.668551712876673	0.365937163740835	0.714411964164752	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.64850223368472	3.25843115304695
Merged-chr6-4686196-1	2.04119817114304	0	1.41541914208031	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-44978690-1	1.48175146342315	0	1.59540332798883	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-150092551-1	1.52215520482054	0	1.47822102629575	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr14-74909239-1	0.905073023810267	0	1.60409153385389	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-25774938-1	0.740619971402702	0	2.07316635633094	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-169870741-1	2.52274712159838	0.656246127356705	1.25825938163652	0.521550752519069	0.601983159920231	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.963545719069792	1.56533893459231
Merged-chr12-8508472-1	2.16102927069721	1.63317255978698	1.33480666223583	1.22352742610034	0.22113055186184	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.306240821987646	0.730937814817307
Merged-chr11-32608441-1	1.46125597821123	0	1.4987252135601	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-119204920-1	2.35105854979776	0	1.42272728471655	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-170740206-1	1.78276990174885	0	1.62744013949988	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-85125134-1	6.31766156295507	0.722367989749089	0.879111328047977	0.821702515599556	0.411246227111052	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.47898020589019	2.56205938946738
Merged-chr19-57138109-1	1.78146945256739	2.54088425596798	1.38186094176983	1.83874091752946	0.0659533020193493	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.27992882773773
Merged-chr8-46400833-1	2.75878029459203	0	1.40063800724483	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-84394315-1	1.57343461543327	-0.0370141348459018	1.77048660815329	-0.020906193063222	0.983320486354678	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.733321818366247	0.723581231604105
Merged-chr15-94539679-1	1.81932100504127	0	1.46252566710204	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr19-16067444-1	3.27355346379639	0	1.40731412662582	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83821249-1	1.12760351313766	0	1.74450085847788	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-132895589-1	4.00551608672862	-0.0361994443079526	1.12950997716512	-0.0320488043840099	0.974433130596842	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.61477032079243	1.30064958020929
Merged-chr6-149323993-1	2.49282143826784	0	1.43644900970645	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-115490827-1	7.72089783882499	0.516412779262439	0.599867954754736	0.860877423388255	0.389305557211202	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.08561748733286	4.10829205553926
Merged-chr6-118302941-1	2.04231948008992	0	1.52573081816485	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-66511119-1	1.36781580039743	0	1.57263041861775	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr16-25967516-1	2.5970863744185	0	1.38343830128762	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-60478826-1	1.41360597904754	0	1.5482807544202	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-117471790-1	1.1540243141771	0	1.5098770311276	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-80095826-1	2.87745731765222	0	1.41908876042573	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67766358-1	2.41920516554015	0	1.39758819031558	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-66385804-1	4.60143572740117	1.48785493638311	0.834137125988913	1.78370544845272	0.0744715403488846	0.760522430373596	C57BL6J_F1_Control-BALBCJ_F1_Control	1.59982791176663	2.62781369820002
Merged-chrX-7862587-1	1.77933742987678	0	1.44131855261711	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-66831489-1	1.55746617974568	0	1.65166152902444	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-37224300-1	3.39891155120436	0.946115547767948	1.11963896795053	0.845018416516696	0.398100556616767	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.25389865972503	2.973409777081
Merged-chr14-30217201-1	1.53642284687089	1.28235080105214	1.49488088308388	0.857828082199234	0.390987400744216	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.601513806634888
Merged-chr2-61734404-1	2.00578304537534	0	1.44093994315017	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-11979842-1	0.755918569124563	0	1.86060301025549	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-91271797-1	2.37820992088075	1.8490333894656	1.47318269955502	1.25512836257451	0.209432165840333	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0.724326877898254
Merged-chr15-13088825-1	2.38967734799624	0	1.43030047272118	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-87501254-1	3.04643472767634	-2.46113946072734	1.26735845853565	-1.94194424170336	0.0521438507305042	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.1639482234215	0.55634759613363
Merged-chr11-80159711-1	1.52659020188698	0	1.51773170746223	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-83854431-1	1.34073063413285	0	1.59312735012533	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-62396013-1	1.15907580002889	0	1.62285614365119	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr7-35030545-1	1.30643261522968	0	1.71034925898974	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr12-84546224-1	2.68317420205547	0	1.42723250585968	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-67042371-1	1.73706024971499	0	1.60323421169717	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-87042147-1	2.18070096641838	0	1.43012316571852	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-102888572-1	0.957079536773776	0	1.57676120398772	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-54988132-1	1.60172771858237	0	1.47344572794156	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-72177345-1	4.30501177535191	0.698415959874225	0.89405943532146	0.781173971530326	0.434700180159961	1	C57BL6J_F1_Control-BALBCJ_F1_Control	1.5268023559189	2.40373656850996
Merged-chr11-19965101-1	3.55509036511212	0	1.46068445615129	0	1	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr9-78073577-1	3.2327708593549	-0.162998149606745	0.794684734034613	-0.205110457802812	0.837485825991801	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.66070805023717	2.4599335956395
Merged-chr11-67112906-1	3.11382377105039	0.297635546041125	0.910790591138014	0.326788121152235	0.743828144560384	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.10514468042323	2.52359390920102
Merged-chr16-10769045-1	1.79267699608613	0	1.59346794214381	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr11-118739062-1	2.06069927137229	0	1.44021005089764	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-6572466-1	2.86728401990425	0	1.40359727851198	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-101689824-1	1.70137850705266	0	1.42686022738657	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr1-119522837-1	2.81341609507254	0	1.42731986739305	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-4115477-1	1.31760545474611	-1.80870625971949	1.41599964291094	-1.2773352513008	0.20148391333874	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.19133112147929	0.303163067301871
Merged-chr3-123149931-1	2.90838198563	0	1.40515105312416	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr5-140225308-1	1.12450437651354	0	1.5218910172738	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr2-104002934-1	1.42369546852329	0	1.58629239030831	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-44941707-1	1.22128360972456	0	1.65634564989671	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr8-14824940-1	3.17496862400287	3.6223171962831	1.19405339113054	3.03363084363713	0.00241629904085243	0.0720107453737375	C57BL6J_F1_Control-BALBCJ_F1_Control	0	2.18927216584514
Merged-chr5-146905977-1	3.25964948058189	1.67641663159163	1.14879007276169	1.45928892609729	0.144485602023014	1	C57BL6J_F1_Control-BALBCJ_F1_Control	0.581381506691384	1.62518823153097
Merged-chr10-44690052-1	1.01230864947683	0	1.86600211147006	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr3-126591176-1	3.77678488361407	0.587346032956231	1.28390385324491	0.457468860671915	0.647334079303431	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.30491330480933	2.50200698894025
Merged-chr19-17142635-1	2.34208784087084	0.0832329461387398	1.11714774049691	0.0745048690710483	0.940608666978876	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	1.47711801254374	2.00101204725338
Merged-chr8-83076731-1	2.00388755833052	2.69176558267367	1.54722575971279	1.73973679392032	0.0819052454609891	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	1.338064021838
Merged-chr17-31576841-1	1.35409916621976	0	1.54629351148441	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr4-136449168-1	1.77305881999966	-3.7389188505187	1.31759259125754	-2.83768964346573	0.00454413432776936	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.22017310661124	0
Merged-chr8-41235786-1	3.20802880286579	-1.15818343328151	0.84197728079622	-1.37555188209623	0.168960412624367	1	C57BL6J_F1_Control-BALBCJ_F1_Control	2.98794568696598	1.71465869101023
Merged-chr5-146820243-1	3.00319704101523	-0.241773288195033	1.12477898136721	-0.214951819157528	0.829804883185596	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	2.60706636077045	2.68483804261906
Merged-chr2-84049004-1	1.30966796695074	0	1.72378358677766	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr6-131003518-1	1.74146827018712	0	1.50605456962651	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr13-43759256-1	3.8263240764305	-1.11006545287348	1.09628953437576	-1.01256594910902	0.311267531161521	1	C57BL6J_F1_Control-BALBCJ_F1_Control	4.21607361705739	2.64625418696582
Merged-chr5-65991632-1	7.24863888243836	-0.0433930291687151	0.695916951037258	-0.0623537465268494	0.950281128167236	1	C57BL6J_F1_Control-BALBCJ_F1_Control	3.18928444155521	3.15732442650782
Merged-chr17-74888321-1	1.85856660553522	3.33822302736778	1.56391387444948	2.1345312436357	0.0327993189242492	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0.420961122473315	1.96683913513607
Merged-chr2-27657036-1	1.53021419555869	0	1.48733205868743	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr10-30808400-1	2.59304194948602	0	1.51285798732402	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0
Merged-chr15-101309063-1	1.70107458037585	0	1.53675271671534	0	1	NA	C57BL6J_F1_Control-BALBCJ_F1_Control	0	0