Preview

bcgsc-pori_ipr_python-2a70eef
- .github
  - ISSUE_TEMPLATE
    - bug_report.md
      
      677 Bytes
    - feature_request.md
      
      604 Bytes
  - workflows
    - publishdevdocs.yml
      
      824 Bytes
    - pypipublish.yml
      
      868 Bytes
    - pytest.yml
      
      2.2 kB
    - quick-pytest.yml
      
      1.4 kB
- .gitignore
  
  273 Bytes
- LICENSE
  
  35.1 kB
- MANIFEST.in
  
  53 Bytes
- README.md
  
  1.7 kB
- buildout.cfg
  
  114 Bytes
- codecov.yml
  
  158 Bytes
- docs
  - images
    - expression_correlation.png
      
      104.7 kB
    - mixcr.circos_trb_vj_gene_usage.png
      
      571.5 kB
  - index.md
    
    124 Bytes
  - overrides
    - 404.html
      
      8.7 kB
- ipr
  - __init__.py
    
    0 Bytes
  - annotate.py
    
    18.0 kB
  - connection.py
    
    3.9 kB
  - constants.py
    
    697 Bytes
  - content.spec.json
    
    44.1 kB
  - inputs.py
    
    19.7 kB
  - ipr.py
    
    15.3 kB
  - main.py
    
    13.0 kB
  - py.typed
    
    0 Bytes
  - summary.py
    
    14.6 kB
  - therapeutic_options.py
    
    2.6 kB
  - types.py
    
    3.1 kB
  - util.py
    
    5.9 kB
- mkdocs.yml
  
  150 Bytes
- pyproject.toml
  
  40 Bytes
- setup.cfg
  
  1.1 kB
- setup.py
  
  38 Bytes
- tests
  - __init__.py
    
    0 Bytes
  - constants.py
    
    90 Bytes
  - test_annotate.py
    
    9.4 kB
  - test_connection.py
    
    3.5 kB
  - test_data
    - copy_variants.tab
      
      244.0 kB
    - expression.tab
      
      584.7 kB
    - fusions.tab
      
      2.0 kB
    - json_examples
      - no_variants.json
        
        127 Bytes
      - sm_and_exp.json
        
        690 Bytes
      - sm_only.json
        
        561 Bytes
    - small_mutations.short.tab
      
      1.8 kB
    - small_mutations.tab
      
      206.4 kB
    - small_mutations_probe.tab
      
      501 Bytes
  - test_inputs.py
    
    11.2 kB
  - test_ipr.py
    
    11.0 kB
  - test_main.py
    
    4.1 kB
  - test_probe.py
    
    2.2 kB
  - test_summary.py
    
    6.5 kB
  - test_util.py
    
    958 Bytes
  - util.py
    
    317 Bytes

bcgsc/pori_ipr_python-v3.7.0.zip