n.;Strain ID;Collection year ;Country;Federal state (Germany);Isolation source;MLST Type;Subspecies (NGS);C. fetus SNP Markers *;ISCfe1 (+/-);Phylogenetic sublineage ;Accession number;Publication
1;BS210-02;2002;Germany;Baden-Wuerttemberg;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927905;This study
2;BS212-02;2002;Germany;Baden-Wuerttemberg;Cow vaginae;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927904;This study
3;BS38-03;2003;Germany;Baden-Wuerttemberg;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927893;This study
4;BS47-03;2003;Germany;Baden-Wuerttemberg;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927882;This study
5;BS57-03;2003;Germany;Baden-Wuerttemberg;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927871;This study
6;BS99-03;2003;Germany;Baden-Wuerttemberg;Cow placenta (Abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927860;This study
7;BS101-03;2003;Germany;Baden-Wuerttemberg;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927852;This study
8;BS105-03;2003;Germany;Baden-Wuerttemberg;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927851;This study
9;BS109-03;2003;Germany;Baden-Wuerttemberg;Cow vaginae;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927850;This study
10;BS51-01;2001;Germany;Baden-Wuerttemberg;Artificial vagina;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927849;This study
11;BS52-01;2001;Germany;Baden-Wuerttemberg;Artificial vagina;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927903;This study
12;BS135-02;2002;Germany;Baden-Wuerttemberg;;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927902;This study
13;BS201-02;2002;Germany;Baden-Wuerttemberg;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;ERS686632;Irola et al., 2017
14;BS111-03;2003;Germany;Baden-Wuerttemberg;Cow vaginae;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927901;This study
15;BS84-04;2004;Germany;Baden-Wuerttemberg;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927900;This study
16;BS89-04;2004;Germany;Baden-Wuerttemberg;Fetus (abortion) - 21.04.2004;-;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-2;SRR21927899;This study
17;BS38-06;2006;Germany;Baden-Wuerttemberg;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;ERS686634;Irola et al., 2017
18;14CS0001;unknown;Germany;Baden-Wuerttemberg;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;ERS686641;Irola et al., 2017
19;BS147-00;unknown;Germany;Baden-Wuerttemberg;Artificial vagina;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927898;This study
20;BS149-00;unknown;Germany;Baden-Wuerttemberg;Artificial vagina;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927897;This study
21;BS09-04;2004;Germany;Bayern;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927896;This study
22;BS76-04;2004;Germany;Bayern;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;ERS686633;Irola et al., 2017
23;BS136-04;2004;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927895;This study
24;BS149-04;2004;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927894;This study
25;BS11-05;2005;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927892;This study
26;BS62-05;2005;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927891;This study
27;BS63-05;2005;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927890;This study
28;BS64-05;2005;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927889;This study
29;BS68-05;2005;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927888;This study
30;BS69-05;2005;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927887;This study
31;BS70-05;2005;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927886;This study
32;BS71-05;2005;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927885;This study
33;BS134-05;2005;Germany;Bayern;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927884;This study
34;BS01-06;2006;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927883;This study
35;BS67-06;2006;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927881;This study
36;BS68-06;2006;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927880;This study
37;07BS0002;2007;Germany;Bayern;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927879;This study
38;07BS0020;2007;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;ERS686635;Irola et al., 2017
39;08CS0029;2008;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927878;This study
40;15CS0204;2015;Germany;Bayern;Bull prepuce ;75;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BW;SRR21927877;This study
41;BS206-02;unknown;Germany;Bayern;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;BA;SRR21927876;This study
42;13CS0183;2013;Germany;Brandenburg;Bull penis;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;ERS686640;Irola et al., 2017
43;13CS0131;2013;Germany;Brandenburg;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927875;This study
44;09CS0018;2009;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927874;This study
45;09CS0029;2009;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927873;This study
46;09CS0030;2009;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927872;This study
47;09CS0031;2009;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927870;This study
48;09CS0032;2009;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927869;This study
49;09CS0074;2009;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927868;This study
50;11CS0190;unknown;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927867;This study
51;11CS0191;unknown;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927866;This study
52;06BS0114;unknown;Germany;Lower Saxony;Cow vaginae;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927865;This study
53;14CS0123;unknown;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927864;This study
54;14CS0124;unknown;Germany;Lower Saxony;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;LS;SRR21927863;This study
55;BS210-99;1985;Germany;Thuringia;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-1;SRR21927862;This study
56;BS211-99;1987;Germany;Thuringia;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-1;SRR21927861;This study
57;BS208-99;1988;Germany;Thuringia;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-1;SRR21927859;This study
58;BS209-99;1988;Germany;Thuringia;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-1;SRR21927858;This study
59;BS212-99;1988;Germany;Thuringia;Fetus (abortion);4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-1;SRR21927857;This study
60;BS327-99;1993;Germany;Thuringia;Bull prepuce ;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-1;SRR21927856;This study
61;BS74-04;2004;Germany;Thuringia;Bull sperm - 30.03.2004;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-2;SRR21927855;This study
62;BS75-04;2004;Germany;Thuringia;Bull prepuce - 30.03.2004;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-2;SRR21927854;This study
63;BS85-04;2004;Germany;Thuringia;Bull prepuce - 14.04.2004;4;cfv;T-T-C-T-A-C-A-C-C-A-G;+;TH-2;SRR21927853;This study