datacarpentry/image-processing-v2023.01.1.zip
datacarpentry-image-processing-086b1d0
.Rhistory
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.editorconfig
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.github
ISSUE_TEMPLATE.md
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PULL_REQUEST_TEMPLATE.md
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workflows
template.yml
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website.yml
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.gitignore
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.zenodo.json
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404.md
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AUTHORS
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CITATION
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CODE_OF_CONDUCT.md
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CONTRIBUTING.md
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Gemfile
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LICENSE.md
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Makefile
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README.md
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_config.yml
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_episodes
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01-introduction.md
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02-image-basics.md
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03-skimage-images.md
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04-drawing.md
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05-creating-histograms.md
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06-blurring.md
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07-thresholding.md
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08-connected-components.md
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09-challenges.md
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_extras
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about.md
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discuss.md
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edge-detection.md
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figures.md
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guide.md
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prereqs.md
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aio.md
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bin
boilerplate
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AUTHORS
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CITATION
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CONTRIBUTING.md
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README.md
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_config.yml
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_episodes
01-introduction.md
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_extras
about.md
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discuss.md
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figures.md
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guide.md
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index.md
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reference.md
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setup.md
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chunk-options.R
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dependencies.R
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generate_md_episodes.R
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install_r_deps.sh
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knit_lessons.sh
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lesson_check.py
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lesson_initialize.py
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markdown_ast.rb
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repo_check.py
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reporter.py
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run-make-docker-serve.sh
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test_lesson_check.py
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util.py
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workshop_check.py
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code
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data
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beads.jpg
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board.jpg
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centers.txt
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chair.jpg
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colonies-01.tif
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colonies-02.tif
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colonies-03.tif
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eight.tif
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gaussian-original.png
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maize-root-cluster.jpg
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maize-roots-grayscale.jpg
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maize-seedlings.tif
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plant-seedling.jpg
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remote-control.jpg
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shapes-01.jpg
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shapes-02.jpg
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sudoku.png
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tree.jpg
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trial-016.jpg
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trial-020.jpg
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trial-216.jpg
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trial-293.jpg
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wellplate-01.jpg
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wellplate-02.tif
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fig
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Gaussian_2D.png
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Normal_Distribution_PDF.svg
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beads-canny-ui.png
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beads-out.png
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black-and-white-edge-pixels.jpg
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black-and-white-gradient.png
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black-and-white.jpg
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blur-demo.gif
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board-coordinates.jpg
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board-final.jpg
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cartesian-coordinates.png
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cat-corner-blue.png
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cat-eye-pixels.jpg
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cat.jpg
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chair-layers-rgb.png
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chair-original.jpg
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checkerboard-blue-channel.png
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checkerboard-green-channel.png
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checkerboard-red-channel.png
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checkerboard.png
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colonies-01-gray.png
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colonies-01-histogram.png
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colonies-01-mask.png
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colonies-01-summary.png
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colonies-01.jpg
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colonies-02-summary.png
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colonies-02.jpg
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colonies-03-summary.png
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colonies-03.jpg
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colonies01.png
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colony-mask.png
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colour-table.png
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combination.png
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drawing-practice.jpg
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eight.png
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five.png
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four-maize-roots-binary-improved.jpg
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four-maize-roots-binary.jpg
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four-maize-roots.jpg
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gaussian-blurred.png
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gaussian-kernel.png
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grayscale.png
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image-coordinates.png
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jupyter_overview.png
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left-hand-coordinates.png
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maize-root-cluster-histogram.png
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maize-root-cluster-mask.png
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maize-root-cluster-selected.png
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maize-root-cluster-threshold.jpg
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maize-roots-threshold.png
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maize-seedling-enlarged.jpg
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maize-seedling-original.jpg
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maize-seedlings-mask.png
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maize-seedlings-masked.jpg
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maize-seedlings.jpg
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plant-seedling-colour-histogram.png
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plant-seedling-grayscale-histogram-mask.png
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plant-seedling-grayscale-histogram.png
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plant-seedling-grayscale.png
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quality-histogram.jpg
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quality-jpg.jpg
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quality-original.jpg
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quality-tif.jpg
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rectangle-gaussian-blurred.png
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remote-control-masked.jpg
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shapes-01-areas-histogram.png
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shapes-01-canny-edge-output.png
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shapes-01-canny-edges.png
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shapes-01-canny-track-edges.png
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shapes-01-cca-detail.png
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shapes-01-filtered-objects.png
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shapes-01-grayscale.png
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shapes-01-histogram.png
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shapes-01-labeled.png
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shapes-01-mask.png
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shapes-01-objects-coloured-by-area.png
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shapes-01-selected.png
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shapes-02-histogram.png
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shapes-02-mask.png
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shapes-02-selected.png
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sudoku-gray.png
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three-colours.png
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wellplate-01-masked.jpg
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wellplate-02-histogram.png
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wellplate-02-masked.jpg
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wellplate-02.jpg
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zero.png
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index.md
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reference.md
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setup.md
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