BioNovogene MZKit: Data toolkits for processing NMR, MALDI MSI, MALDI single cell, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization
Description
Mzkit is an open source raw data file toolkit for mass spectrometry data analysis, provides by the BioNovoGene corporation. The features of mzkit inlcudes: raw data file content viewer(XIC/TIC/Mass spectrum plot), build molecule network, formula de-novo search and de-novo annotation.
This open source mass spectrometry data toolkit is developed at the BioDeep R&D laboratory and brought to you by BioNovoGene corporation.
Downloads: http://www.biodeep.cn/downloads?lang=en-US
๐๐๐2023 ๐Happy chinese new year! ๐งจ๐งจ๐งจ๐๐๐๐
fixedMake bugs fixed for the web query cache system: empty cache could make the empty query result always returned, now it has been fixed!newAdd mzkit background services process viewernewReconstruct of the mzkit workbench desktop application framework for implements the plugin feature, the mzkit app sotre online services is comming soon!enhancementfixed for the possible null reference error and the index out of range error, make the MS-imaging viewer more stableenhancementmake improvements of the task progress UIenhancementadd copy text and save log output text function to the log text output windownewAdd custom action for view scatter 3d data on the table data.newView spatial metabolism tissue spot cluster data in 3d scatter plot viewnewAdd new feature for connect to the cloud services for processing ms-imaging data analysis and visualizationnewAdd a new feature for view virtual pathology slide in tiff, dzi or ndpi format!newView NMR raw data spectrumnewView 3D MALDI scan data, MS-imaging in 3DnewAdd single cell metabolism data processing feature into the mzkit R# package!enhancementAdd data context menu in the spectrum matrix viewer: [Open in table view] for send the spectrum matrix to the table viewer for the further data analysis or visualization, and the [Save] menu item for export the selected spectrum matrix into an excel file.enhancementAdd shortcut button for launch the ms data file conversion toolnewMerge multiple ms-imaging sample data file into one larger slide, and you also can custom the sample location layout in a super easy waynewAdd an excited feature which you can make the spatial mapping between the spatial transcription sample slide and the spatial metabolism sample slide!enhancementmake improvements of the ms-imaging render output post image processing functionfixedmake bugs fixed for the in-correct slide scan width and height when do background clean in manually.enhancementchange the [install Mzkit] button from install package internally to calling the external pipeline script for initialize the R# runtime environment.updatemake improvements of the MS-imaging viewer, update to v2.0 version: do zoom, rotation of the ms-imaging outputupdateAdd parameter adjustment for the peak finding algorithm pageenhancementAdd functional buttons/context menu to the peak finding page: save matrix, imports matrix and copy peak list data.enhancementAdd options for check sample row data normalization when do row sample data merge of the MS-imaging row scans.
Full Changelog: https://github.com/xieguigang/mzkit/compare/3.5.593.3968...4.1.9.5689
Notes
Files
xieguigang/mzkit-4.1.9.5689.zip
Files
(393.6 MB)
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md5:f3cae2df29a378af25e302a5d75a3558
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Additional details
Related works
- Is supplement to
- https://github.com/xieguigang/mzkit/tree/4.1.9.5689 (URL)