Published January 13, 2023
| Version 0.0.13rc1
Software
Open
neurostuff/NiMARE: 0.0.13rc1
Creators
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Salo, Taylor1
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Yarkoni, Tal2
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Nichols, Thomas E.3
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Poline, Jean-Baptiste4
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Kent, James D.5
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Gorgolewski, Krzysztof J.6
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Glerean, Enrico7
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Bottenhorn, Katherine L.1
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Bilgel, Murat8
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Wright, Jessey6
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Reeders, Puck1
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Kimbler, Adam1
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Nielson, Dylan N.9
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Yanes, Julio A.10
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PĆ©rez, Alexandre11
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Oudyk, Kendra M.11
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Jarecka, Dorota12
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Enge, Alexander13
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Peraza, Julio A.1
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Eickhoff, Simon B.14
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De La Vega, Alejandro15
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Liu, Zhen-Qi11
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Laird, Angela R.1
- 1. Florida International University
- 2. University of Texas at Austin
- 3. Big Data Institute, University of Oxford
- 4. Neurology and Neurosurgery, McGill University
- 5. Neuroscience Program, University of Iowa
- 6. Department of Psychology, Stanford University
- 7. Department of Neuroscience and Biomedical Engineering, Aalto University
- 8. National Institute on Aging
- 9. National Institute of Mental Health
- 10. Auburn University
- 11. Montreal Neurological Institute, McGill University
- 12. MIT
- 13. Max Planck Institute for Human Cognitive and Brain Sciences
- 14. Heinrich-Heine-UniversitƤt DĆ¼sseldorf
- 15. Department of Psychology, University of Texas at Austin
Description
What's Changed
Testing release code
š Breaking Changes- Remove Peaks2Maps from NiMARE by @tsalo in https://github.com/neurostuff/NiMARE/pull/644
- Remove duecredit in favor of BibTeX references by @tsalo in https://github.com/neurostuff/NiMARE/pull/736
- Switch from face+edge connectivity to face-only by @tsalo in https://github.com/neurostuff/NiMARE/pull/733
- Remove conperm and scale CLI workflows by @tsalo in https://github.com/neurostuff/NiMARE/pull/740 ### š Exciting New Features
- Add
tablesattribute to MetaResult class by @tsalo in https://github.com/neurostuff/NiMARE/pull/734 - Add FocusFilter class for removing coordinates outside of a mask by @tsalo in https://github.com/neurostuff/NiMARE/pull/732
- Add parallelization option to
CorrelationDecoderandCorrelationDistributionDecoderby @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/738 - Append the top 3 words to LDA topic names by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/741
- Enhance LDA annotator by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/742 ### š Bug Fixes
- Shift centers of mass into clusters in Jackknife/FocusCounter by @tsalo in https://github.com/neurostuff/NiMARE/pull/735
- fix a bug in conversion from z statistics to p values by @yifan0330 in https://github.com/neurostuff/NiMARE/pull/749
- Remove "dataset"
return_typeoption from kernel transformers by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/752 ### Other Changes - Fix import in download_neurosynth example by @PTDZ in https://github.com/neurostuff/NiMARE/pull/743
- Optimize compute_kda_ma by @liuzhenqi77 in https://github.com/neurostuff/NiMARE/pull/745
- Optimize dataset.get by @liuzhenqi77 in https://github.com/neurostuff/NiMARE/pull/746
- Fix MACM analysis example by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/750
- Remove upper bound for matplotlib version by @ghisvail in https://github.com/neurostuff/NiMARE/pull/751
- Fix neurosyth download_abstracts example; inc biopython by @WillForan in https://github.com/neurostuff/NiMARE/pull/753
- Raise deprecation warnings with Python 3.6 and 3.7 by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/754
- [MAINT] Fix various errors due to major version changes in dependencies by @jdkent in https://github.com/neurostuff/NiMARE/pull/757
- @PTDZ made their first contribution in https://github.com/neurostuff/NiMARE/pull/743
- @liuzhenqi77 made their first contribution in https://github.com/neurostuff/NiMARE/pull/745
- @yifan0330 made their first contribution in https://github.com/neurostuff/NiMARE/pull/749
- @ghisvail made their first contribution in https://github.com/neurostuff/NiMARE/pull/751
- @WillForan made their first contribution in https://github.com/neurostuff/NiMARE/pull/753
Full Changelog: https://github.com/neurostuff/NiMARE/compare/0.0.12...0.0.13rc1
Files
neurostuff/NiMARE-0.0.13rc1.zip
Files
(15.9 MB)
| Name | Size | Download all |
|---|---|---|
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md5:a9d312714433517cf3503a401d2c7902
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Additional details
Related works
- Is supplement to
- https://github.com/neurostuff/NiMARE/tree/0.0.13rc1 (URL)