Published January 6, 2023 | Version v1
Dataset Open

Halictus ligatus Halictidae UCSB-IZC00036803 https://library.big-bee.net/portal/collections/individual/index.php?occid=72096 Male - Bee Library - 73e389aa-5886-4c48-8778-ba8932d1bd7e hash://sha256/3a178bd2f588c35eb9729309d1baa769ea819bcd5bb5142c2de208dd8e299d1a hash://md5/88a7c9b9b2df777a17e707aab635b3ef

Description

A biodiversity dataset graph: UCSB-IZC00036803

The intended use of this archive is to facilitate (meta-)analysis of the Halictus ligatus Halictidae UCSB-IZC00036803 https://library.big-bee.net/portal/collections/individual/index.php?occid=72096 Male - Bee Library - 73e389aa-5886-4c48-8778-ba8932d1bd7e (UCSB-IZC00036803). UCSB-IZC00036803 provides an animated GIF, and wavefront 3D object model, of male bee specimen Halictus ligatus Halictidae UCSB-IZC00036803 University of Santa Barbara Invertebrate Zoology Collection as well as the original digital data/image files that were used to find and build this animated GIF and associated 3D model. 

This dataset provides versioned snapshots of the UCSB-IZC00036803 network as tracked by Preston [2,3] between  and 2023-01-06 using "preston update -u https://library.big-bee.net/portal/content/dwca/UCSB-IZC_DwC-A.zip". 

The archive consists of individual files with hexadecimal filenames (e.g., 00017797ddefeae2a7e84ef8897961f6912ad46a17571dadb4eeb78415036274) to allow for parallel file downloads. The archive contains three types of files: index files, provenance logs and data files. Index files provide a way to links provenance files in time to establish a versioning mechanism. Provenance files describe how, when, what and where the UCSB-IZC00036803 content was retrieved. For more information, please visit https://preston.guoda.bio or https://doi.org/10.5281/zenodo.1410543 .  

To retrieve and verify the downloaded UCSB-IZC00036803 biodiversity dataset graph, download all files. Then, extract the archives into a "data" folder. Alternatively, you can use the preston[2] command-line tool to "clone" this dataset using:

$ java -jar preston.jar clone --remote https://zenodo.org/record/7510912/files

After that, verify the index of the archive by reproducing the following provenance log history:

$ java -jar preston.jar history --log tsv
hash://sha256/3a178bd2f588c35eb9729309d1baa769ea819bcd5bb5142c2de208dd8e299d1a    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/ae55cd4df206144e7500ce1d6d9164333fe846ee47c361c851bf86e3ebc8f292    
hash://sha256/ae55cd4df206144e7500ce1d6d9164333fe846ee47c361c851bf86e3ebc8f292    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/ff2bc87beb11a8232f23d4ea3d1023b78d837c863e69caa570aec579b8965ef0    
hash://sha256/ff2bc87beb11a8232f23d4ea3d1023b78d837c863e69caa570aec579b8965ef0    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/dc645edcfc9b474c5dada538de1fcc8a50fde2e723452ca2b177c1d00f1644a2    
hash://sha256/dc645edcfc9b474c5dada538de1fcc8a50fde2e723452ca2b177c1d00f1644a2    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/f42f82027cc61d06aa57930c17e6d9dd459f7293e010f1f40e3500c9e68d4d96    
hash://sha256/f42f82027cc61d06aa57930c17e6d9dd459f7293e010f1f40e3500c9e68d4d96    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/e7169b1514767a7d02a7ac61ca131da1521498ca42940f5acf1ffe43a17ba611    
hash://sha256/e7169b1514767a7d02a7ac61ca131da1521498ca42940f5acf1ffe43a17ba611    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/1c74a3918246f45786aef0e23103f2cdabba55f7eb64657c6837d58358f819a4    
hash://sha256/1c74a3918246f45786aef0e23103f2cdabba55f7eb64657c6837d58358f819a4    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/d462468c73343bbadd6964302df27d5aba90069dcd62a2cdede57daa6e43c7ae    
hash://sha256/d462468c73343bbadd6964302df27d5aba90069dcd62a2cdede57daa6e43c7ae    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/f0d1ba006950ab2727473681f4708ee0b702ac36f06d827498d0033a8f44b724    
hash://sha256/f0d1ba006950ab2727473681f4708ee0b702ac36f06d827498d0033a8f44b724    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/de6838210317fbfd0ac4d5c430e088a927466fbce1213e51c136fc31c305f0cf    
hash://sha256/de6838210317fbfd0ac4d5c430e088a927466fbce1213e51c136fc31c305f0cf    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/f36ca5bf301d832ffdeb8a7845941aa384fdece722bb07c9adefb075c54d9ce7    
hash://sha256/f36ca5bf301d832ffdeb8a7845941aa384fdece722bb07c9adefb075c54d9ce7    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/3b333607244a7a31f1b1237b43378a5ad379d19c4c57b3e1c4d0fd93c7a84bc2    
hash://sha256/3b333607244a7a31f1b1237b43378a5ad379d19c4c57b3e1c4d0fd93c7a84bc2    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/80eea4389d774d0dc656f8a8c705facf86261bedd98ce163f0c6ce97c660f442    
hash://sha256/80eea4389d774d0dc656f8a8c705facf86261bedd98ce163f0c6ce97c660f442    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/8e72c0e1fe9d19c4a5acc30ad7ef252cc5e77b071d69e326065804d4adbbb60a    
hash://sha256/8e72c0e1fe9d19c4a5acc30ad7ef252cc5e77b071d69e326065804d4adbbb60a    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/2be2593151de5840700b42f02e4b2a9233b041cb35ab0145eb2999cab07d642f    
hash://sha256/2be2593151de5840700b42f02e4b2a9233b041cb35ab0145eb2999cab07d642f    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/950bd498c2f8ea1ce2f306daa18d756f5b1d01bbaab8570cea8dd0ba5db2a373    
hash://sha256/950bd498c2f8ea1ce2f306daa18d756f5b1d01bbaab8570cea8dd0ba5db2a373    http://www.w3.org/ns/prov#wasDerivedFrom    hash://sha256/99b99ae3062100874cdce3a7e539e32faa898212f637601e8d986ac0bb011f63    
urn:uuid:0659a54f-b713-4f86-a917-5be166a14110    http://purl.org/pav/hasVersion    hash://sha256/99b99ae3062100874cdce3a7e539e32faa898212f637601e8d986ac0bb011f63    

To check the integrity of the extracted archive, confirm that each line produce by the command "preston verify" produces lines as shown below, with each line including "CONTENT_PRESENT_VALID_HASH". Depending on hardware capacity, this may take a while.

$ java -jar preston.jar verify
replace wwith preston verify | head -n4

Note that a copy of the java program "preston", preston.jar, is included in this publication. The program runs on java 8+ virtual machine using "java -jar preston.jar", or in short "preston". 

Files in this data publication:

--- start of file descriptions ---

-- description of archive and its contents (this file) --
README 

-- executable java jar containing preston [2,3] v0.5.2. --
preston.jar

-- preston archives containing UCSB-IZC00036803 data files, associated provenance logs and a provenance index --
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--- end of file descriptions ---


References 

[1] Halictus ligatus Halictidae UCSB-IZC00036803 https://library.big-bee.net/portal/collections/individual/index.php?occid=72096 Male - Bee Library - 73e389aa-5886-4c48-8778-ba8932d1bd7e (UCSB-IZC00036803, https://library.big-bee.net/portal/content/dwca/UCSB-IZC_DwC-A.zip) accessed from  to 2023-01-06 with provenance hash://sha256/99b99ae3062100874cdce3a7e539e32faa898212f637601e8d986ac0bb011f63.
[2] https://preston.guoda.bio, https://doi.org/10.5281/zenodo.1410543 . 
[3] MJ Elliott, JH Poelen, JAB Fortes (2020). Toward Reliable Biodiversity Dataset References. Ecological Informatics. https://doi.org/10.1016/j.ecoinf.2020.101132


This work is funded in part by grant NSF OAC 1839201 and NSF DBI 2102006 from the National Science Foundation.
 

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2.2 kB Download
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1.1 MB Download
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1.0 MB Download
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1.0 MB Download
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1.0 MB Download
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982.5 kB Download
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1.1 MB Download
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996.3 kB Download
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1.0 MB Download
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2.0 MB Download
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1.0 MB Download
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78 Bytes Download
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1.0 MB Download
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1.0 MB Download
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1.1 MB Download
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999.5 kB Download
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2.6 kB Download
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1.0 MB Download
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1.1 MB Download
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78 Bytes Download
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1.0 MB Download
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998.6 kB Download
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78 Bytes Download
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990.2 kB Download
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2.0 MB Preview Download
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993.3 kB Download
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1.1 MB Download
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216 Bytes Download
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1.0 MB Download
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78 Bytes Download
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1.0 MB Download
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1.0 MB Download
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1.1 MB Download
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78 Bytes Download
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1.1 MB Download
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1.0 MB Download
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78 Bytes Download
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4.0 kB Download
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1.0 MB Download
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992.3 kB Download
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1.1 MB Download
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1.0 MB Download
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1.0 MB Download
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1.1 MB Download
md5:1da3c2cf44043434cb59526c4a43036a
982.5 kB Download
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1.0 MB Download
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1.0 MB Download
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7.0 kB Download
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1.0 MB Download
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1.1 MB Download
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41.8 kB Download
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1.0 MB Download
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1.0 MB Download
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1.1 MB Download
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2.6 kB Download
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1.0 MB Download
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1.0 MB Download
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1.0 MB Download
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1.0 MB Download
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5.7 kB Download
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1.0 MB Download
md5:cd8367e095bb784840cb1ff495cf2a2e
41.8 kB Download
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1.1 MB Download
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2.6 kB Download
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1.1 MB Download
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987.8 kB Download
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1.0 MB Download
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999.9 kB Download
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975.1 kB Download
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1.1 MB Download
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1.1 MB Download
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2.6 kB Download
md5:51de0c12825f04c23eddef771f715f65
125 Bytes Download
md5:b32e28f3b5e52b7a204b3b3604eba814
21.0 kB Download
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2.0 MB Preview Download
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3.9 MB Preview Download
md5:fbf98379901d612e46af7161eda103d2
216 Bytes Download
md5:43026d1caaa18d3430fa78d7a0836859
145.4 MB Download