twestWTCN/WhenDoBurstsMatter_West_2022-v1.0.1.zip
twestWTCN-WhenDoBurstsMatter_West_2022-b1303da
.gitattributes
66 Bytes
LICENSE
1.1 kB
README.md
1.7 kB
WhenDoBurstsMatter_West_2022_MasterScript.m
2.5 kB
dataprep
KMGenericPrepareData.m
5.7 kB
fingerTapsPrepareData.m
8.9 kB
investigateNLTransBehaviour.m
4.3 kB
motorBasicPrepareData.m
9.5 kB
motorImageryPrepareData.m
6.3 kB
routineDataPrep_preFitGenericDataCheck.m
2.6 kB
routineDataPrep_reduceFeaturesToGroupLevel.m
1.8 kB
dependencies
ABCFits
ABCErrorFX.m
337 Bytes
KMiller_toolbox
.DS_Store
6.1 kB
_histogram.m
1.6 kB
affine.m
16.1 kB
altgwin.m
362 Bytes
aranalysis.m
9.2 kB
barpic.m
315 Bytes
bonf_holm.m
4.3 kB
bootmean.m
644 Bytes
calc_corr.m
970 Bytes
calc_rsqu.m
1.3 kB
car.m
774 Bytes
check_order.m
857 Bytes
cohanalysis.m
6.7 kB
cohere.m
2.5 kB
condentropy.m
3.6 kB
crossfreqCoh.m
1.3 kB
ctrc.m
2.9 kB
delay.m
2.6 kB
dprime.m
932 Bytes
edist.m
478 Bytes
entropy.m
3.0 kB
entropy2.m
3.6 kB
exportfig.m
15.0 kB
fftplot.m
352 Bytes
figfix.m
360 Bytes
fileinfo.m
1.1 kB
findsta.m
1.6 kB
flat_plot.m
2.9 kB
freezeColors.m
9.8 kB
gen_ctmr_surf_colormap.m
487 Bytes
gen_figs.m
6.8 kB
gen_pois_ill.m
688 Bytes
gen_spectrafig.m
1.1 kB
geostd.m
423 Bytes
getButterFilter.m
1.1 kB
get_OL_pct.m
439 Bytes
get_bcode.m
996 Bytes
gridcolor.m
6.9 kB
hanning.m
2.3 kB
herrorbar.m
3.5 kB
histg.m
3.2 kB
histogram2.m
2.5 kB
information.m
3.7 kB
kjm_computepsd.m
1.9 kB
kjm_errbar.m
1.4 kB
kjm_errbar2.m
1.3 kB
kjm_errbar_grps.m
726 Bytes
kjm_imagesc.m
303 Bytes
kjm_natbar.m
2.7 kB
kjm_plv.m
506 Bytes
kjm_printfig.m
441 Bytes
kjm_printfig2.m
509 Bytes
kjm_tf 2.m
607 Bytes
kjm_tf.m
607 Bytes
linfit.m
2.7 kB
load_bcidat.m
1.1 kB
localmaxmin.m
3.5 kB
logspectraparse.m
2.1 kB
matparse.m
1.2 kB
mexpfit.m
4.5 kB
mni2tal.m
923 Bytes
mscohere.m
4.4 kB
noisepic.m
2.9 kB
ns_1k_1_300_filt.mat
2.3 kB
old_spatialPattern.m
2.6 kB
parseandmark.m
1.6 kB
parseandmarkws_2.m
2.0 kB
parseandmarkwsc.m
1.9 kB
pathdef.m
41.1 kB
pcr.m
711 Bytes
pivot.m
984 Bytes
plane_intersect.m
2.6 kB
posact.m
2.9 kB
psd.m
6.2 kB
psdchk.m
5.0 kB
pt_ln_dist.m
366 Bytes
randel.m
295 Bytes
readegi.m
6.2 kB
resample_2group_means.m
883 Bytes
resamplevs0.m
603 Bytes
roc_curve.m
1.7 kB
rotateticklabel.m
1.7 kB
rsa.m
357 Bytes
rsqu.m
353 Bytes
runica.m
42.7 kB
runpca.m
2.8 kB
rvalue.m
424 Bytes
scalefactor_1kHz.m
100 Bytes
sem.m
138 Bytes
spectraparse.m
2.1 kB
staparse.m
1.8 kB
staparse_facehouse.m
1.8 kB
stastat.m
1.7 kB
sub_rand.m
264 Bytes
topoparse.m
2.0 kB
topoplot.m
10.9 kB
trc.m
2.7 kB
trpca.m
1.3 kB
vidpatch.m
927 Bytes
welch.m
1.9 kB
colouredNoise
f_alpha1.m
2.2 kB
ffGn.m
4.5 kB
r8vec_sftb.m
1.0 kB
r8vec_sftf.m
1.2 kB
drtoolbox
.DS_Store
6.1 kB
._.DS_Store
120 Bytes
._Contents.m
120 Bytes
._compute_mapping.m
406 Bytes
._drgui.m
120 Bytes
._generate_data.m
120 Bytes
._intrinsic_dim.m
120 Bytes
._mexall.m
120 Bytes
._out_of_sample.m
120 Bytes
._out_of_sample_est.m
120 Bytes
._prewhiten.m
120 Bytes
._reconstruct_data.m
120 Bytes
._test_toolbox.m
120 Bytes
Contents.m
1.3 kB
Readme.txt
14.3 kB
compute_mapping.m
20.1 kB
drgui.m
571 Bytes
generate_data.m
5.2 kB
gui
._adaptive_callback.m
120 Bytes
._case1.m
120 Bytes
._choose_method.m
120 Bytes
._ded.m
120 Bytes
._drtool.m
120 Bytes
._lnst.m
120 Bytes
._load_data.m
120 Bytes
._load_data_1_var.m
120 Bytes
._load_data_vars.m
120 Bytes
._load_xls.m
120 Bytes
._mapping_parameters.m
120 Bytes
._no_history.m
120 Bytes
._not_calculated.m
120 Bytes
._not_loaded.m
120 Bytes
._plot12n.m
120 Bytes
._plotn.m
120 Bytes
._scatter12n.m
120 Bytes
._scattern.m
120 Bytes
._update_kernel_uipanel.m
120 Bytes
._update_type_uipanel.m
120 Bytes
adaptive_callback.m
680 Bytes
case1.m
874 Bytes
choose_method.m
5.3 kB
ded.m
871 Bytes
drtool.m
52.4 kB
lnst.m
866 Bytes
load_data.m
6.4 kB
load_data_1_var.m
4.8 kB
load_data_vars.m
7.7 kB
load_xls.m
4.8 kB
mapping_parameters.m
23.4 kB
no_history.m
7.5 kB
not_calculated.m
7.6 kB
not_loaded.m
7.5 kB
plot12n.m
1.3 kB
plotn.m
3.9 kB
scatter12n.m
1.3 kB
scattern.m
3.5 kB
update_kernel_uipanel.m
1.4 kB
update_type_uipanel.m
798 Bytes
intrinsic_dim.m
9.0 kB
mexall.m
1.5 kB
out_of_sample.m
10.2 kB
out_of_sample_est.m
2.2 kB
prewhiten.m
1.1 kB
reconstruct_data.m
1.8 kB
techniques
._L2_distance.m
120 Bytes
._backprop.m
120 Bytes
._backprop_gradient.m
120 Bytes
._cca.m
120 Bytes
._cfa.m
120 Bytes
._cg_update.m
120 Bytes
._charting.m
120 Bytes
._checkgrad.m
120 Bytes
._combn.m
120 Bytes
._components.m
120 Bytes
._compute_recon_err.m
120 Bytes
._csdp.m
120 Bytes
._d2p.m
120 Bytes
._diffusion_maps.m
120 Bytes
._dijk.m
120 Bytes
._dijkstra.cpp
120 Bytes
._dijkstra.m
120 Bytes
._em_pca.m
120 Bytes
._fa.m
120 Bytes
._fastmvu.m
120 Bytes
._find_nn.m
120 Bytes
._find_nn_adaptive.m
120 Bytes
._gda.m
120 Bytes
._gplvm.m
120 Bytes
._gplvm_grad.m
120 Bytes
._gram.m
120 Bytes
._hill_obj.m
120 Bytes
._hillclimber2c.m
120 Bytes
._hlle.m
120 Bytes
._infermfa.m
120 Bytes
._isomap.m
120 Bytes
._jdqr.m
120 Bytes
._jdqz.m
120 Bytes
._kernel_function.c
120 Bytes
._kernel_function.m
120 Bytes
._kernel_pca.m
120 Bytes
._landmark_isomap.m
120 Bytes
._laplacian_eigen.m
120 Bytes
._lda.m
120 Bytes
._llc.m
120 Bytes
._lle.m
120 Bytes
._lltsa.m
120 Bytes
._lmnn.m
120 Bytes
._lmvu.m
120 Bytes
._lpp.m
120 Bytes
._ltsa.m
120 Bytes
._mcml.m
120 Bytes
._mcml_grad.m
120 Bytes
._mds.m
120 Bytes
._mgs.m
120 Bytes
._minimize.m
120 Bytes
._mppca.m
120 Bytes
._mvu_x.m
120 Bytes
._mvu_x_grad.m
120 Bytes
._nca.m
120 Bytes
._nca_lin_grad.m
120 Bytes
._npe.m
120 Bytes
._pca.m
120 Bytes
._readsol.m
120 Bytes
._recon_data_from_autoenc.m
120 Bytes
._roll_out.m
120 Bytes
._run_data_through_autoenc.m
120 Bytes
._run_data_through_network.m
120 Bytes
._run_llc.m
120 Bytes
._sammon.m
120 Bytes
._sdecca2.m
120 Bytes
._sne.m
120 Bytes
._sparse_nn.m
120 Bytes
._spe.m
120 Bytes
._sym_sne.m
120 Bytes
._train_autoencoder.m
120 Bytes
._train_deep_autoenc.m
120 Bytes
._train_grbm.m
120 Bytes
._train_lin_rbm.m
120 Bytes
._train_rbm.m
120 Bytes
._tsne.m
120 Bytes
._tsne_d.m
120 Bytes
._tsne_p.m
120 Bytes
._welcome.m
120 Bytes
._writesdpa.m
120 Bytes
._x2p.m
120 Bytes
L2_distance.m
2.2 kB
backprop.m
3.2 kB
backprop_gradient.m
3.0 kB
cca.m
14.8 kB
cfa.m
6.4 kB
cg_update.m
3.7 kB
charting.m
3.1 kB
checkgrad.m
2.0 kB
combn.m
2.9 kB
components.m
1.6 kB
compute_recon_err.m
2.0 kB
computegr.c
2.8 kB
computegr.dll
7.2 kB
computegr.mexa64
9.3 kB
computegr.mexglx
6.6 kB
computegr.mexmaci
12.8 kB
computegr.mexmaci64
9.1 kB
csdp.exe
1.1 MB
csdp.m
6.3 kB
csdplinux
1.7 MB
csdpmac
82.5 kB
csdpmaci
89.6 kB
d2p.m
3.5 kB
diffusion_maps.m
1.7 kB
dijk.m
3.6 kB
dijkstra.cpp
30.7 kB
dijkstra.m
2.2 kB
dijkstra.mexglx
16.9 kB
dijkstra.mexmaci
23.0 kB
dijkstra.mexmaci64
20.8 kB
em_pca.m
3.5 kB
fa.m
2.0 kB
fastmvu.m
4.5 kB
fibheap.h
3.0 kB
find_nn.c
3.7 kB
find_nn.m
2.3 kB
find_nn_adaptive.m
3.0 kB
gda.m
3.6 kB
gplvm.m
1.3 kB
gplvm_grad.m
1.4 kB
gram.m
2.1 kB
hill_obj.m
781 Bytes
hillclimber2c.m
1.1 kB
hlle.m
4.1 kB
infermfa.m
1.8 kB
isomap.m
2.5 kB
jdqr.m
73.1 kB
jdqz.m
79.0 kB
kernel_function.c
7.1 kB
kernel_function.m
5.4 kB
kernel_function.mexmaci
17.2 kB
kernel_pca.m
4.2 kB
landmark_isomap.m
3.2 kB
laplacian_eigen.m
3.5 kB
lda.m
2.3 kB
llc.m
4.1 kB
lle.m
4.6 kB
lltsa.m
3.3 kB
lmnn.m
5.4 kB
lmvu.m
8.5 kB
lpp.m
3.1 kB
ltsa.m
3.4 kB
mcml.m
2.3 kB
mcml_grad.m
1.4 kB
mds.m
1.0 kB
mexCCACollectData.c
8.2 kB
mexCCACollectData.dll
6.7 kB
mexCCACollectData.mexa64
11.8 kB
mexCCACollectData.mexglx
9.1 kB
mexCCACollectData.mexmaci
17.1 kB
mexCCACollectData.mexmaci64
13.4 kB
mexCCACollectData2.c
6.3 kB
mexCCACollectData2.dll
8.2 kB
mexCCACollectData2.mexa64
10.2 kB
mexCCACollectData2.mexglx
7.8 kB
mexCCACollectData2.mexmaci
17.0 kB
mexCCACollectData2.mexmaci64
13.2 kB
mgs.m
1.0 kB
minimize.m
8.3 kB
mppca.m
4.9 kB
mvu_x.m
1.5 kB
mvu_x_grad.m
1.4 kB
nca.m
2.3 kB
nca_lin_grad.m
2.1 kB
npe.m
4.1 kB
pca.m
2.3 kB
readsol.m
4.1 kB
recon_data_from_autoenc.m
1.1 kB
roll_out.m
1.0 kB
run_data_through_autoenc.m
1.4 kB
run_data_through_network.m
973 Bytes
run_llc.m
2.3 kB
sammon.m
7.1 kB
sdecca2.m
7.2 kB
sne.m
3.2 kB
sparse_nn.m
972 Bytes
spe.m
3.7 kB
sym_sne.m
3.2 kB
train_autoencoder.m
2.1 kB
train_deep_autoenc.m
2.3 kB
train_grbm.m
4.7 kB
train_lin_rbm.m
4.2 kB
train_rbm.m
4.2 kB
tsne.m
3.2 kB
tsne_d.m
2.2 kB
tsne_p.m
4.9 kB
welcome.m
1.1 kB
writesdpa.m
7.8 kB
x2p.m
3.6 kB
test_toolbox.m
5.3 kB
fdr_bh
fdr_bh.m
8.8 kB
license.txt
1.3 kB
genContinuumEnvModels_130121
surrogate.m
12.8 kB
helpers
computeAmpSpec.m
415 Bytes
computeBetaSNR_AbsPeak.m
373 Bytes
findBetaPeak.m
412 Bytes
findDesync.m
471 Bytes
stdDiff.m
112 Bytes
unpack.m
227 Bytes
permutest
license.txt
1.5 kB
permutest.m
17.4 kB
plotfx
computePlotSVM.m
2.7 kB
makeBarPlotError.m
903 Bytes
makeGroupBarPlotError.m
313 Bytes
plotBurstConstruction.m
609 Bytes
plotROCCurve.m
375 Bytes
scatterBar.m
724 Bytes
statsfx
getBurstStats.m
1.8 kB
pdfExpVal.m
344 Bytes
restrictedCorrelation.m
961 Bytes
fitting
routineModelFit_compareModels.m
6.9 kB
routineModelFit_fitGroupLevel.m
4.9 kB
methods
ECoG_Space
makeBlockGrid.m
1.1 kB
averageFeatCells.m
505 Bytes
averageFeatCells_BUV2.m
710 Bytes
bddlSurrogate.m
1.7 kB
bursts
HMM
burstAmpHistHMM.m
2.0 kB
burstDurHistHMM.m
2.1 kB
burstIntHistHMM.m
1.7 kB
constructGenCrossMatrixHMM.m
10.7 kB
getTimeLockedBurstWaveform.m
1.5 kB
simpleBurstDefineMMC.m
2.2 kB
computeSyncDesyncMI.m
5.5 kB
convertNameListToReadable.m
2.3 kB
modToolbox
commonPreProc.m
334 Bytes
findClosest2ROI.m
640 Bytes
gen_inv_pts_TW.m
4.2 kB
getWinMark.m
149 Bytes
selectDataCriteria.m
1.7 kB
permSigStat.m
550 Bytes
plotting
plotNLTransBehaviour.m
3.0 kB
plotRawTimeSeries_burst.m
246 Bytes
plotSensorLocations.m
2.0 kB
reconstructBurstStats.m
324 Bytes
reduceSpectraToGaussians.m
2.6 kB
removeNormOutliers.m
346 Bytes
saveParSets.m
209 Bytes
model_fx
JR_model
model_fx_JR
ABC_fx_JR_mmc.m
5.2 kB
ABC_fx_compile_JR.m
3.0 kB
getStateDetailsJR.m
2.0 kB
sigmoidin.m
86 Bytes
modelspec_JR
MS_burstABC_MMC_JRModel1.m
2.1 kB
priors_JR
getModelPriorsJR.m
1.7 kB
WC_model
model_fx_NH
ABC_fx_NH_mmc.m
2.3 kB
ABC_fx_compile_NH.m
2.9 kB
getStateDetailsNH.m
1.6 kB
sigNevHol.m
85 Bytes
modelspec_NH
MS_burstABC_MMC_NHModel1.m
2.4 kB
recallIntDelayTableWS.m
2.3 kB
recallIntDelayTableWS_emp.m
2.9 kB
priors_NH
getModelPriorsNH_emp.m
1.2 kB
modelanalysis
routineModelAnalysis_analyseGroupLevel.m
4.5 kB
routineModelAnalysis_analyseGroupLevelExampleParCorrs.m
5.6 kB
routineModelAnalysis_analyseGroupLevelParCorelations.m
5.8 kB
routineModelAnalysis_analyseIOControlParameter.m
2.5 kB
outputs
mainproject
burstcortex
dataprep_beta
SAMod_burstcortex_dataprep_beta.mat
15.3 kB
SMod_burstcortex_dataprep_beta.mat
138.5 kB
bigStoreEdit_burstcortex_dataprep_beta.mat
4.9 kB
bigStore_burstcortex_dataprep_beta.mat
7.0 kB
burstSurWaveFormStore_burstcortex_dataprep_beta.mat
512.0 kB
burstWaveFormStore_burstcortex_dataprep_beta.mat
469.3 kB
exampDatStore_burstcortex_dataprep_beta.mat
3.3 MB
featBank_burstcortex_dataprep_beta.mat
111.8 kB
mergeCodes_burstcortex_dataprep_beta.mat
183 Bytes
mergeLabels_burstcortex_dataprep_beta.mat
229 Bytes
subjects_burstcortex_dataprep_beta.mat
260 Bytes
surFeatBank_burstcortex_dataprep_beta.mat
113.3 kB
typeLabels_burstcortex_dataprep_beta.mat
314 Bytes
plotting
data
routineDataPlot_ExampleTimeSeries.m
621 Bytes
routineDataPlot_GroupGenericFeatures.m
3.6 kB
routineDataPlot_GroupHDS_SVM.m
1.1 kB
routineDataPlot_GroupSurrogateResults.m
5.7 kB
model
routineModelAnalysisPlot_ExampleCorrelations.m
3.9 kB
routineModelAnalysisPlot_GroupLevelFeatures.m
3.6 kB
routineModelAnalysisPlot_GroupLevelFitParameters.m
4.1 kB
routineModelAnalysisPlot_GroupLevelFitStats.m
4.8 kB
routineModelAnalysisPlot_IOResponsePerParameter.m
3.4 kB
projectABCConfigurations.m
4.0 kB
setGraphicsDefaults.m
308 Bytes
setupPaths.m
1.4 kB