Bahmani et al.—American Journal of Botany 2022—Appendix S14,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Appendix S14. PGLMM correlations among compounds and summary statistics in leaves. Pairwise correlations (R2 value with sign added) in upper and lower triangles correspond to pairwise regressions of the form y~x (lower triangle) and x~y (upper triangle), where y is the variable given by the column name and x is the variable given by the row name. For both GLMM and PGLMM regressions under a BM model, correlations are identical regardless of which variable is dependent vs independent. However, for generalized linear mixed models and phylogenetic regressions estimated with Pagel's lambda parameter, the choice of dependent and independent variable has an impact the correlation, though typically only to a minor extent. Results from both directions are presented to demonstrate the lack of sensitivity to the arbitrary choice of dependent vs independent variable for the reported pairwise correlations.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
,Total.diterpenes,Total.lipids,Total.monoterpenes,Total.others,Total.sesquiterpenes,Total.terpenes,Total.compounds,Number.of.compounds,d..alpha..Pinene,X3.Carene,alpha.Pinene,Camphene,Sabinene,L..beta..Pinene,beta.Myrcene,D.Limonene,gamma.Terpinene,Borneol,Bornyl.acetate,Gentisaldehyde,X1.Pentadecene,Copaene,beta.Ylangene,Caryophyllene,cis..alpha..Bergamotene,Cadina.3.5.diene,Humulene,X....epi.Bicyclosesquiphellandrene,gamma.Muurolene,alpha.Amorphene,alpha.Bergamotene,Germacrene.D,Longipinene,alpha.Cedrene,beta.Selinene,Epizonarene,alpha.Muurolene,beta.Cadinene,gamma.Bisabolene,gamma.Cadinene,delta.Amorphene,trans.Calamenene,Cadine.1.4.diene,alpha.Cadinene,alpha.Calacorene,tau.Cadinol,tau.Muurolol
Total.diterpenes,,-0.04,0.08,0.03,0.13,0.14,0.12,0.1,0.03,0.02,-0.01,0.03,0.08,0.01,0.09,0.03,0.05,0.12,0.05,-0.02,-0.08,0.01,0.02,0.12,0.03,0.07,0.21,0.03,0.02,0.03,0,0.07,0.02,0.04,0,0.06,0.02,0.16,0.04,0.04,0.07,0.05,0.07,0.05,0.02,0.07,0.01
Total.lipids,-0.08,,-0.06,-0.02,-0.1,-0.1,-0.07,-0.04,0,-0.02,-0.01,-0.06,-0.09,0.01,-0.17,-0.02,-0.02,-0.01,0.01,-0.02,0.11,-0.08,-0.01,-0.04,-0.1,-0.23,-0.08,-0.11,-0.14,-0.17,0,-0.15,-0.03,-0.12,0.07,-0.17,-0.05,-0.17,-0.08,-0.1,-0.08,-0.16,-0.03,-0.25,-0.08,-0.19,-0.2
Total.monoterpenes,0.09,-0.04,,0.04,0.27,0.6,0.46,0.1,0.42,0,0.07,0.15,0.3,0.05,0.36,0.28,0.19,0.24,0.38,0.06,-0.58,0.01,0,0.26,0,0.08,0.07,0.05,0.01,0.09,0,0.03,0.02,0,0.04,0.07,0.04,0.03,-0.04,0.09,0.15,0.02,0.01,0.02,0.02,0.11,0.06
Total.others,-0.02,-0.04,0.05,,0.2,0.19,0.36,-0.04,0.01,-0.01,0,0.03,0.01,-0.02,0.03,0.03,0,0.13,0.07,0.07,0,0.03,0,0.07,0.07,-0.01,-0.01,-0.02,0,-0.01,0,0,0.04,-0.01,0.03,0,-0.01,-0.02,0.05,0.06,0.06,0,-0.04,0.01,0.01,0.02,0.01
Total.sesquiterpenes,0.17,-0.06,0.29,0.22,,0.78,0.74,0.26,0.05,0.08,0.01,0.07,0.06,0,0.25,0.17,0.03,0.27,0.21,0.05,-0.26,0.23,0.06,0.67,0.06,0.34,0.3,0.23,0.29,0.19,0,0.29,0.09,0.06,-0.01,0.26,0.12,0.28,0.05,0.62,0.67,0.14,0.11,0.33,0.17,0.36,0.22
Total.terpenes,0.16,-0.06,0.59,0.19,0.76,,0.89,0.17,0.19,0.03,0.04,0.14,0.17,0.01,0.34,0.27,0.11,0.31,0.34,0.05,-0.41,0.07,0.02,0.51,0.06,0.18,0.2,0.12,0.12,0.12,0,0.13,0.05,0.02,0.01,0.13,0.08,0.12,0.02,0.35,0.4,0.07,0.03,0.13,0.07,0.2,0.13
Total.compounds,0.14,-0.03,0.46,0.37,0.72,0.89,,0.11,0.15,0.04,0.04,0.15,0.15,-0.01,0.27,0.22,0.08,0.33,0.32,0.04,-0.19,0.08,0.02,0.47,0.07,0.15,0.17,0.11,0.09,0.09,0,0.1,0.07,0.01,0.01,0.1,0.05,0.09,0.03,0.28,0.32,0.04,0.02,0.1,0.05,0.19,0.11
Number.of.compounds,0.13,-0.04,0.11,-0.07,0.27,0.19,0.13,,0.02,0.05,-0.01,0.05,0.06,0.09,0.14,0.09,0.03,0.17,0.1,-0.01,-0.24,0.18,0.11,0.32,0,0.36,0.35,0.33,0.22,0.23,0,0.32,0.06,0.06,-0.12,0.28,0.12,0.36,0.01,0.28,0.3,0.06,0.25,0.33,0.13,0.37,0.08
d..alpha..Pinene,0.02,0,0.45,0.02,0.06,0.2,0.15,0.01,,-0.03,0.05,0.13,0.15,0.04,0.14,0.13,0.07,0.06,0.28,0.03,-0.19,0,0,0.06,0,0.01,0,0.01,-0.01,0.03,0,0,0.01,-0.05,0.09,0.02,0.04,0,-0.1,0.01,0.03,0.01,-0.02,0,0,0.02,0.01
X3.Carene,0.02,-0.03,0,0,0.03,0.01,-0.01,0.03,-0.05,,-0.11,0.03,-0.01,0.02,0.01,-0.01,-0.01,0.04,-0.01,0.05,-0.01,0.02,0,0.01,-0.04,0.03,0.02,0.05,0.05,0,0,0.05,-0.01,0.07,-0.05,0.03,0.01,0.06,0.01,0.04,0.03,0.02,0.12,0.04,0.01,0.02,0.02
alpha.Pinene,0,-0.01,0.09,0.01,0.01,0.05,0.04,0,0.08,-0.12,,0.02,0.13,0.01,0.1,0.03,0.02,0,0.03,0.01,-0.04,-0.02,0,0.02,0.06,0,0,0,-0.03,0.03,0,-0.01,0.04,0,0.02,0,-0.02,-0.01,0,0,0,0,-0.03,0,0,0.01,0.01
Camphene,0.05,-0.06,0.13,0.03,0.08,0.12,0.13,0.05,0.11,0.05,0.02,,0.11,0.08,0.11,0.04,-0.01,0.32,0.17,0.03,-0.03,0.04,0.03,0.04,0.08,0.1,0.03,0.1,0.03,0.12,0,0.03,0.06,0.02,-0.01,0.13,0.09,0.03,-0.01,0.05,0.06,0.03,0.05,0.08,0.05,0.2,0.07
Sabinene,0.06,-0.07,0.27,0.01,0.06,0.16,0.14,0.05,0.15,-0.01,0.07,0.1,,0.01,0.23,0.07,0.31,0.09,0.19,0.03,-0.09,-0.01,-0.01,0.05,0.05,0.03,0.05,0.01,0,0.06,0,0.01,0.05,-0.01,0.01,0.02,0,0,0.01,0.01,0.02,0,0,0.01,0,0.05,0.02
L..beta..Pinene,0.02,0.02,0.05,-0.02,0,0.01,0,0.08,0.06,0.03,0,0.11,0.01,,0.07,0.05,0,0.06,0,0,-0.04,-0.02,0.02,0.01,-0.11,0.01,0.03,0.03,-0.02,0,0,0,-0.01,0.04,-0.03,0.01,0,0.01,-0.01,0.01,0.01,-0.03,0.07,0,-0.02,0.02,0.01
beta.Myrcene,0.07,-0.08,0.28,0.04,0.18,0.26,0.21,0.1,0.16,0.01,0.05,0.09,0.19,0.05,,0.08,0.04,0.12,0.13,0.06,-0.19,0.01,0.02,0.11,0.01,0.18,0.08,0.14,0.01,0.14,0,0.07,0.02,0.04,-0.01,0.15,0.05,0.05,0,0.09,0.12,0.01,0.04,0.09,0.01,0.19,0.09
D.Limonene,0.02,-0.03,0.27,0.03,0.15,0.26,0.19,0.06,0.13,-0.01,0.04,0.05,0.08,-0.03,0.06,,0.06,0.15,0.18,0.06,-0.22,-0.01,-0.07,0.19,0,0.01,0.03,0,0.01,0,0,0.09,0.07,-0.02,0.04,0,0.01,0,-0.04,0.05,0.09,0.02,-0.01,0,0.01,0.02,0
gamma.Terpinene,0.05,-0.02,0.15,0,0.02,0.08,0.05,0.02,0.09,-0.02,0.03,-0.02,0.33,0,0.03,0.06,,0.01,0.03,-0.01,-0.09,0,-0.03,0.06,0.01,-0.01,0.08,-0.03,-0.01,-0.01,0,-0.01,0,-0.01,0.04,-0.02,-0.01,0.01,0.07,0.01,0.02,0.01,-0.03,-0.01,0,0,0
Borneol,0.12,-0.01,0.24,0.14,0.26,0.32,0.34,0.15,0.07,0.03,0,0.24,0.1,0.05,0.14,0.16,0.02,,0.37,0.06,-0.09,0.07,0.03,0.23,0.03,0.09,0.1,0.09,0.07,0.07,0,0.08,0.05,0.02,-0.01,0.11,0.08,0.05,0,0.14,0.17,0.07,0.04,0.07,0.07,0.19,0.01
Bornyl.acetate,0.06,0.01,0.37,0.06,0.18,0.33,0.31,0.08,0.25,0,0.05,0.17,0.21,0.01,0.16,0.18,0.03,0.37,,0.07,-0.15,0,0.03,0.14,0.02,0.03,0.02,0.04,0.03,0.05,0,0.01,0.01,-0.01,0.07,0.06,0.07,0,-0.05,0.06,0.1,0,0.01,0,0.02,0.06,0.01
Gentisaldehyde,-0.02,-0.02,0.09,0.04,0.04,0.06,0.04,0,0.04,0.05,0.02,0.03,0.03,0,0.05,0.08,-0.01,0.04,0.07,,-0.09,0.01,-0.04,0,-0.01,0.01,-0.02,0.03,0.02,0.03,0,0.04,0.04,0.02,0.03,0.02,0.04,0,-0.04,0.03,0.03,0.02,0,0,0.05,0.03,0.02
X1.Pentadecene,-0.09,0.06,-0.51,0.01,-0.23,-0.4,-0.19,-0.19,-0.17,-0.01,-0.02,-0.03,-0.11,-0.03,-0.29,-0.22,-0.1,-0.09,-0.16,-0.07,,-0.01,-0.01,-0.27,0.01,-0.12,-0.1,-0.07,-0.05,-0.08,0,-0.1,-0.01,-0.02,0,-0.08,-0.05,-0.09,0,-0.14,-0.22,-0.05,-0.04,-0.05,-0.04,-0.09,-0.07
Copaene,0.01,-0.09,0.01,0.04,0.22,0.08,0.09,0.17,-0.01,0.04,-0.01,0.03,-0.01,-0.01,0.01,0.01,-0.01,0.06,0,0.01,-0.01,,0.05,0.18,0.03,0.55,0.13,0.33,0.69,0.36,0,0.42,0.07,0.05,-0.23,0.39,0.35,0.35,0.02,0.52,0.41,0.29,0.19,0.61,0.64,0.51,0.19
beta.Ylangene,0.02,-0.03,0,0,0.05,0.02,0.02,0.09,0,0.01,0.02,0.03,-0.01,0.02,0.03,-0.04,-0.04,0.03,0.03,-0.03,-0.01,0.04,,0.04,0,0.08,0.09,0.15,0.06,0.09,0,0,-0.01,0.1,-0.04,0.12,0.06,0.08,0.01,0.07,0.06,-0.03,0.21,0.06,0.02,0.06,0.04
Caryophyllene,0.16,-0.02,0.32,0.09,0.72,0.61,0.55,0.33,0.06,0.02,0.07,0.04,0.06,0.01,0.19,0.22,0.08,0.26,0.19,0,-0.33,0.22,0.05,,0.01,0.29,0.46,0.18,0.22,0.17,0,0.24,0.07,0.04,-0.01,0.23,0.08,0.27,0.02,0.41,0.54,0.06,0.1,0.25,0.14,0.27,0.11
cis..alpha..Bergamotene,0.04,-0.09,0.01,0.07,0.06,0.06,0.08,0,0,-0.02,0.04,0.06,0.06,-0.11,0.01,0,0.01,0.03,0.02,0.02,0,0.03,0,0.01,,0.03,0.01,0.01,0.06,0.03,0,0.02,0.09,0.01,-0.01,0.01,0.03,0.01,0.11,0.02,0.02,0.11,-0.02,0.07,0.04,0.07,0.02
Cadina.3.5.diene,0.08,-0.12,0.08,-0.02,0.34,0.19,0.16,0.32,0,0.06,0,0.06,0.03,0,0.25,0.02,-0.02,0.1,0.04,0.03,-0.13,0.55,0.09,0.23,0.02,,0.25,0.61,0.57,0.62,0,0.61,0.09,0.1,-0.23,0.71,0.38,0.64,0.01,0.52,0.47,0.21,0.32,0.8,0.5,0.73,0.42
Humulene,0.23,-0.04,0.07,-0.01,0.24,0.17,0.15,0.31,-0.01,0.02,0,0.03,0.05,0.02,0.11,0.05,0.08,0.1,0.02,-0.01,-0.09,0.11,0.09,0.39,0.01,0.25,,0.19,0.15,0.25,0,0.19,0.01,0.1,-0.08,0.2,0.07,0.46,0.03,0.26,0.29,0.03,0.2,0.24,0.04,0.21,0.06
X....epi.Bicyclosesquiphellandrene,0.03,-0.06,0.05,-0.03,0.22,0.12,0.1,0.31,0.02,0.1,0,0.08,0.01,0.03,0.19,0.01,-0.03,0.1,0.05,0.04,-0.09,0.33,0.17,0.16,0.01,0.64,0.21,,0.38,0.65,0,0.36,0.05,0.11,-0.21,0.85,0.48,0.39,-0.01,0.39,0.33,0.1,0.41,0.52,0.34,0.59,0.22
gamma.Muurolene,0.02,-0.12,0.01,0,0.28,0.12,0.1,0.22,-0.02,0.05,-0.07,0.02,-0.01,-0.02,0.02,0.01,-0.01,0.08,0.03,0.02,-0.05,0.73,0.07,0.21,0.06,0.62,0.18,0.4,,0.4,0,0.5,0.07,0.11,-0.22,0.46,0.4,0.51,0.04,0.54,0.44,0.3,0.23,0.71,0.6,0.55,0.23
alpha.Amorphene,0.03,-0.1,0.09,-0.02,0.18,0.12,0.09,0.2,0.03,0,0.04,0.07,0.06,0,0.17,0.01,-0.01,0.06,0.05,0.04,-0.08,0.34,0.1,0.14,0.03,0.61,0.29,0.61,0.38,,0,0.33,0.04,0.08,-0.12,0.74,0.52,0.28,-0.02,0.34,0.31,0.13,0.29,0.5,0.36,0.55,0.21
alpha.Bergamotene,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
Germacrene.D,0.08,-0.1,0.03,0,0.26,0.12,0.1,0.28,-0.01,0.03,-0.03,0.03,0.01,0,0.1,0.07,-0.02,0.08,0.01,0.04,-0.09,0.41,0,0.19,0.02,0.6,0.19,0.34,0.45,0.33,0,,0.11,0.04,-0.21,0.37,0.25,0.49,0.01,0.41,0.35,0.31,0.18,0.65,0.42,0.58,0.25
Longipinene,-0.01,-0.03,0.04,0.09,0.18,0.12,0.15,0.06,0.02,-0.01,0.03,0.06,0.05,-0.02,0.04,0.1,0,0.08,0.04,0.05,-0.01,0.13,-0.01,0.11,0.15,0.14,0.01,0.09,0.11,0.08,0,0.2,,-0.11,-0.06,0.1,0.06,0.04,0,0.13,0.11,0.1,0.06,0.17,0.13,0.19,0.04
alpha.Cedrene,0.06,-0.09,0,-0.01,0.07,0.02,0.01,0.07,-0.06,0.06,-0.01,0.02,-0.02,0.04,0.07,-0.02,-0.01,0.02,-0.01,0.06,-0.04,0.06,0.14,0.04,0.01,0.13,0.14,0.13,0.13,0.09,0,0.05,-0.15,,-0.12,0.11,0.02,0.21,0.16,0.11,0.09,0.02,0.08,0.13,0.04,0.13,0.09
beta.Selinene,0,0.05,0.04,0.04,-0.01,0.01,0.01,-0.11,0.1,-0.04,0.03,-0.01,0.02,-0.03,-0.02,0.04,0.05,-0.01,0.07,0.05,-0.01,-0.21,-0.04,-0.01,-0.01,-0.24,-0.08,-0.21,-0.2,-0.13,0,-0.21,-0.06,-0.1,,-0.15,-0.09,-0.19,-0.03,-0.1,-0.05,-0.1,-0.1,-0.38,-0.14,-0.21,-0.06
Epizonarene,0.06,-0.08,0.07,-0.01,0.24,0.14,0.12,0.24,0.03,0.08,0,0.08,0.02,0.01,0.19,0.01,-0.03,0.09,0.07,0.02,-0.09,0.37,0.13,0.17,0.01,0.68,0.22,0.79,0.41,0.71,0,0.37,0.08,0.08,-0.13,,0.51,0.42,-0.01,0.39,0.36,0.13,0.47,0.54,0.38,0.6,0.23
alpha.Muurolene,0.02,-0.04,0.05,-0.01,0.1,0.06,0.04,0.1,0.04,0.01,-0.04,0.09,0,0,0.06,0.01,-0.01,0.09,0.07,0.03,-0.04,0.38,0.05,0.07,-0.02,0.4,0.07,0.53,0.38,0.58,0,0.23,0.04,0.02,-0.08,0.65,,0.15,-0.08,0.33,0.28,0.33,0.29,0.29,0.52,0.39,0.07
beta.Cadinene,0.17,-0.11,0.03,-0.03,0.27,0.13,0.1,0.33,0,0.1,-0.01,0.02,0.01,0.01,0.08,0.01,0.02,0.06,0,0,-0.1,0.37,0.1,0.22,0.01,0.64,0.44,0.42,0.49,0.3,0,0.51,0.05,0.17,-0.19,0.42,0.16,,0.06,0.47,0.39,0.15,0.33,0.62,0.26,0.49,0.26
gamma.Bisabolene,0.04,-0.06,-0.03,0.05,0.04,0.02,0.03,0.01,-0.12,0.03,-0.01,-0.02,0.01,-0.01,0,-0.02,0.07,0,-0.05,-0.03,0,0.02,0.01,0.02,0.1,0,0.03,-0.01,0.03,-0.02,0,0,0,0.12,-0.03,-0.01,-0.07,0.05,,0.02,0.01,0.04,-0.01,0.03,0.01,0.01,0.02
gamma.Cadinene,0.06,-0.09,0.15,0.07,0.67,0.41,0.36,0.35,0.01,0.05,0,0.06,0.01,0.01,0.16,0.07,0.01,0.19,0.09,0.02,-0.21,0.6,0.09,0.48,0.03,0.68,0.31,0.47,0.61,0.43,0,0.55,0.09,0.12,-0.13,0.55,0.38,0.56,0.03,,0.83,0.32,0.25,0.63,0.48,0.65,0.4
delta.Amorphene,0.1,-0.06,0.23,0.07,0.74,0.51,0.43,0.34,0.03,0.04,0,0.06,0.03,0.01,0.2,0.11,0.03,0.21,0.15,0.03,-0.29,0.47,0.07,0.61,0.02,0.59,0.33,0.4,0.49,0.39,0,0.46,0.08,0.09,-0.06,0.49,0.32,0.44,0.02,0.83,,0.27,0.22,0.51,0.41,0.57,0.34
trans.Calamenene,0.03,-0.16,0.04,0.01,0.14,0.08,0.07,0.05,0,0.02,0,0.03,0,-0.03,0.02,0.02,0.01,0.08,0,0.02,-0.04,0.49,-0.01,0.09,0.1,0.3,0.03,0.13,0.43,0.19,0,0.31,0.08,0.02,-0.11,0.2,0.34,0.17,0.04,0.31,0.27,,0.04,0.34,0.52,0.34,0.12
Cadine.1.4.diene,0.1,-0.01,0.01,-0.04,0.08,0.02,0.01,0.24,-0.02,0.13,-0.02,0.06,-0.01,0.07,0.06,0,-0.03,0.05,0.01,-0.01,-0.05,0.18,0.21,0.09,-0.02,0.34,0.23,0.46,0.21,0.31,0,0.18,0.09,0.08,-0.1,0.49,0.3,0.38,-0.01,0.21,0.18,0.04,,0.25,0.15,0.29,0.06
alpha.Cadinene,0.06,-0.13,0.01,0.02,0.34,0.14,0.11,0.3,-0.01,0.05,0.02,0.04,0.01,0,0.12,0.01,-0.01,0.07,0,0.02,-0.04,0.65,0.07,0.22,0.07,0.77,0.27,0.48,0.72,0.51,0,0.63,0.09,0.11,-0.34,0.55,0.33,0.63,0.03,0.59,0.5,0.29,0.25,,0.5,0.7,0.39
alpha.Calacorene,0.02,-0.06,0.03,0.01,0.16,0.07,0.06,0.12,0,0.02,-0.01,0.04,0,-0.02,0.02,0.01,0,0.07,0.02,0.06,-0.03,0.68,0.02,0.12,0.04,0.52,0.05,0.34,0.6,0.4,0,0.41,0.08,0.03,-0.16,0.43,0.5,0.24,0.01,0.4,0.35,0.37,0.16,0.49,,0.54,0.2
tau.Cadinol,0.08,-0.1,0.1,0.05,0.33,0.2,0.18,0.33,0.02,0.02,0.02,0.12,0.07,0.02,0.23,0.04,-0.01,0.17,0.07,0.07,-0.1,0.49,0.06,0.21,0.06,0.72,0.21,0.53,0.49,0.53,0,0.58,0.11,0.11,-0.21,0.62,0.35,0.48,0.01,0.48,0.43,0.22,0.26,0.71,0.51,,0.32
tau.Muurolol,0.01,-0.13,0.07,0.01,0.24,0.15,0.13,0.08,0,0.05,0,0.06,0.02,0.01,0.13,0,0,0.02,0.01,0.04,-0.07,0.23,0.05,0.11,0.02,0.45,0.09,0.25,0.25,0.25,0,0.3,0.02,0.09,-0.09,0.28,0.1,0.29,0.04,0.32,0.29,0.12,0.07,0.43,0.23,0.37,