Bahmani et al.—American Journal of Botany 2022—Appendix S13,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Appendix S13. GLMM correlations among compounds and summary statistics in leaves. Pairwise correlations (R2 value with sign added) in upper and lower triangles correspond to pairwise regressions of the form y~x (lower triangle) and x~y (upper triangle), where y is the variable given by the column name and x is the variable given by the row name. For both GLMM and PGLMM regressions under a BM model, correlations are identical regardless of which variable is dependent vs independent. However, for generalized linear mixed models and phylogenetic regressions estimated with Pagel's lambda parameter, the choice of dependent and independent variable has an impact the correlation, though typically only to a minor extent. Results from both directions are presented to demonstrate the lack of sensitivity to the arbitrary choice of dependent vs independent variable for the reported pairwise correlations.",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
,Total.diterpenes,Total.lipids,Total.monoterpenes,Total.others,Total.sesquiterpenes,Total.terpenes,Total.compounds,Number.of.compounds,d..alpha..Pinene,X3.Carene,alpha.Pinene,Camphene,Sabinene,L..beta..Pinene,beta.Myrcene,D.Limonene,gamma.Terpinene,Borneol,Bornyl.acetate,Gentisaldehyde,X1.Pentadecene,Copaene,beta.Ylangene,Caryophyllene,cis..alpha..Bergamotene,Cadina.3.5.diene,Humulene,X....epi.Bicyclosesquiphellandrene,gamma.Muurolene,alpha.Amorphene,alpha.Bergamotene,Germacrene.D,Longipinene,alpha.Cedrene,beta.Selinene,Epizonarene,alpha.Muurolene,beta.Cadinene,gamma.Bisabolene,gamma.Cadinene,delta.Amorphene,trans.Calamenene,Cadine.1.4.diene,alpha.Cadinene,alpha.Calacorene,tau.Cadinol,tau.Muurolol
Total.diterpenes,,-0.04,0.09,0.02,0.09,0.12,0.11,0.09,0.04,-0.01,0,0.06,0.09,0.03,0.04,0.03,0.07,0.11,0.06,0,-0.07,-0.01,-0.01,0.09,0.02,0.05,0.13,0.02,0.02,0.02,-0.02,0.06,-0.02,0.06,0.01,0.04,0,0.12,0.04,0.02,0.04,0.03,0.05,0.03,0.01,0.06,-0.01
Total.lipids,-0.05,,-0.03,0.04,-0.04,-0.03,-0.02,0.01,0,-0.01,-0.01,-0.03,-0.06,-0.01,-0.18,0,-0.03,0.01,0,-0.03,0.06,-0.07,-0.02,-0.02,-0.07,-0.14,-0.06,-0.07,-0.11,-0.13,0.05,-0.15,-0.03,-0.12,0.09,-0.09,-0.05,-0.1,-0.05,-0.07,-0.05,-0.16,-0.01,-0.18,-0.1,-0.14,-0.13
Total.monoterpenes,0.1,-0.04,,0.02,0.18,0.53,0.42,0.11,0.34,0,0.06,0.16,0.28,0.06,0.25,0.22,0.23,0.25,0.32,0.03,-0.54,0.02,0.02,0.19,-0.01,0.06,0.06,0.04,0.02,0.08,-0.05,0.05,0.04,0,0.05,0.06,0.04,0.04,-0.05,0.08,0.11,0.01,0.01,0.02,0.03,0.08,0.04
Total.others,0.02,0.06,0.02,,0.28,0.21,0.34,0.03,0,-0.01,0.01,0.01,0,-0.03,0.02,-0.01,-0.01,0.1,0.06,0.06,0,0.03,0.01,0.13,0.08,0,0,0,0.01,0,0.02,0,0.04,-0.01,0.03,0,0,0,0.04,0.06,0.07,-0.01,0,0.01,0,0.02,0.02
Total.sesquiterpenes,0.12,-0.02,0.18,0.29,,0.76,0.73,0.3,0.02,0.05,0.03,0.06,0.01,0,0.16,0.08,0.02,0.24,0.19,0.04,-0.23,0.29,0.1,0.71,0.06,0.37,0.35,0.27,0.34,0.23,0.01,0.15,0.09,0.03,-0.01,0.3,0.12,0.33,0.03,0.58,0.59,0.07,0.16,0.35,0.16,0.33,0.26
Total.terpenes,0.13,-0.02,0.52,0.21,0.74,,0.92,0.23,0.12,-0.02,0.05,0.14,0.1,0.01,0.24,0.17,0.08,0.31,0.33,0.03,-0.4,0.12,0.04,0.54,0.04,0.2,0.24,0.14,0.17,0.15,-0.01,0.1,0.06,0,0.01,0.17,0.09,0.16,0.01,0.36,0.39,0.02,0.07,0.15,0.09,0.21,0.15
Total.compounds,0.11,-0.01,0.41,0.34,0.72,0.92,,0.18,0.09,-0.02,0.05,0.15,0.08,0.01,0.19,0.14,0.06,0.32,0.3,0.03,-0.2,0.13,0.04,0.5,0.05,0.17,0.22,0.12,0.14,0.13,-0.01,0.08,0.07,0,0.01,0.15,0.06,0.14,0.01,0.31,0.33,0.01,0.06,0.13,0.07,0.19,0.13
Number.of.compounds,0.1,0.01,0.11,0.04,0.3,0.24,0.19,,0.04,-0.03,0.03,0.07,0.03,0.04,0.07,0.07,0.05,0.16,0.1,0.01,-0.23,0.22,0.09,0.31,-0.01,0.35,0.33,0.35,0.24,0.26,-0.04,0.19,0.07,0.01,-0.07,0.31,0.13,0.36,0,0.3,0.32,0.01,0.26,0.33,0.12,0.35,0.11
d..alpha..Pinene,0.03,0,0.42,0,0.01,0.12,0.09,0.02,,-0.03,0.03,0.11,0.1,0.06,0.08,0.07,0.07,0.05,0.19,0.05,-0.17,-0.02,-0.01,0.02,-0.01,0,0,0,-0.02,0.01,-0.02,0,0,-0.03,0.08,0,0.01,-0.02,-0.09,0.02,0.02,-0.01,0.01,-0.02,0,0.03,0
X3.Carene,-0.01,-0.02,0,0,0.02,-0.01,-0.01,-0.02,-0.04,,-0.1,-0.04,-0.01,-0.02,0.02,0,-0.01,0.03,0.01,0.03,0,0.02,0,0.01,-0.02,0.02,0.02,-0.03,0.03,0,0.02,0.04,-0.01,0.08,-0.04,0.02,0,0.05,0.02,0.03,0.03,0.01,0.07,0.03,0.01,0.02,0.02
alpha.Pinene,0,-0.01,0.08,0.02,0.04,0.06,0.06,0.02,0.05,-0.11,,0.05,0.02,0.01,0.05,0.02,0,0,0.03,0.02,-0.04,0.01,0.03,0.03,0.03,0.02,0.01,0.03,0.01,0.06,-0.02,0.01,0.05,0,-0.01,0.03,0.04,0,-0.01,0.01,0.02,0,-0.01,0.01,0,0.02,0.03
Camphene,0.07,-0.04,0.17,0.01,0.07,0.15,0.15,0.08,0.12,-0.06,0.03,,0.05,0.09,0.05,0.08,0.01,0.32,0.19,0.04,-0.03,0.04,0.01,0.04,0.03,0.11,0.06,0.1,0.04,0.11,-0.02,0.04,0.03,0.02,-0.01,0.14,0.08,0.06,-0.02,0.05,0.06,0.01,0.03,0.07,0.06,0.18,0.09
Sabinene,0.07,-0.06,0.26,0,0.01,0.09,0.08,0.03,0.09,-0.01,0.02,0.05,,0.02,0.16,0.05,0.48,0.04,0.07,-0.01,-0.07,-0.02,-0.12,0.01,0.03,0.01,0.01,0.01,-0.02,0.02,-0.06,0.02,-0.01,0,0.03,0.01,-0.02,0.02,-0.04,0,0,0.01,-0.02,-0.01,0.02,0.02,0
L..beta..Pinene,0.03,-0.01,0.07,-0.03,0.01,0,0.01,0.04,0.08,-0.02,0.01,0.12,0.02,,0.08,0.01,0.01,0.03,0,0.02,-0.03,-0.03,0,0,-0.11,0,0.01,0.01,-0.03,0,-0.03,0.01,-0.03,0.04,-0.02,0,0,0,-0.01,0,0,0,0.02,0,-0.01,0.01,0
beta.Myrcene,0.03,-0.11,0.18,0.02,0.11,0.16,0.13,0.04,0.07,0.01,0.04,0.04,0.14,0.05,,0.05,0.06,0.06,0.1,0.05,-0.13,0.01,0.01,0.08,-0.01,0.14,0.06,0.09,0.03,0.11,-0.06,0.12,0.01,0.04,-0.01,0.11,0.03,0.05,-0.01,0.07,0.08,0.02,0.02,0.07,0.03,0.12,0.06
D.Limonene,0.02,0,0.25,-0.02,0.11,0.22,0.18,0.06,0.07,-0.01,0.01,0.08,0.05,0,0.04,,0.05,0.17,0.2,0.02,-0.18,0,0.01,0.13,-0.02,0.05,0.05,0.04,0,0.02,-0.09,0.04,0.03,0,0.02,0.03,0.01,0.02,-0.03,0.04,0.06,-0.01,0,0.01,0.03,0.03,0
gamma.Terpinene,0.07,-0.04,0.2,-0.01,0.01,0.05,0.04,0.03,0.07,-0.02,0,0.01,0.5,0.01,0.06,0.07,,0.01,0.01,-0.03,-0.06,-0.04,-0.17,0.01,-0.03,0.07,0.03,-0.09,-0.04,0.08,-0.19,0.02,-0.06,0,0.07,-0.09,-0.07,0.05,0.08,0.05,0.05,0.02,-0.04,-0.05,0.04,-0.01,-0.02
Borneol,0.1,0.01,0.25,0.1,0.23,0.33,0.34,0.15,0.05,0.01,0.01,0.27,0.04,0.02,0.08,0.14,0.01,,0.36,0.09,-0.09,0.06,0.03,0.21,0.02,0.08,0.12,0.09,0.07,0.07,0.01,0.05,0.05,0.01,0.01,0.1,0.07,0.06,0,0.11,0.13,0.02,0.03,0.06,0.06,0.17,0.03
Bornyl.acetate,0.05,0,0.33,0.07,0.19,0.34,0.31,0.09,0.16,0,0.03,0.18,0.07,0,0.14,0.17,0,0.37,,0.06,-0.16,0.01,0.04,0.16,0.02,0.04,0.04,0.05,0.05,0.06,0,0,0.03,0.02,0.06,0.07,0.05,0.01,-0.06,0.06,0.1,0,0.02,0.01,0.04,0.07,0.01
Gentisaldehyde,0,-0.04,0.06,0.05,0.06,0.05,0.04,0,0.06,0.02,0.01,0.04,-0.01,0.01,0.06,0.02,-0.03,0.07,0.08,,-0.08,0.01,0,0.02,0.01,0.02,-0.01,0.03,0.03,0.05,-0.01,0.03,0.01,0.03,0.05,0.03,0.04,0,-0.03,0.04,0.04,0.06,0,0.01,0.04,0.05,0.03
X1.Pentadecene,-0.07,0.04,-0.45,0.01,-0.21,-0.38,-0.19,-0.19,-0.12,0,-0.02,-0.03,-0.07,-0.02,-0.2,-0.14,-0.06,-0.1,-0.16,-0.05,,-0.01,-0.01,-0.26,0.01,-0.1,-0.09,-0.07,-0.05,-0.07,0,-0.07,-0.01,-0.01,-0.01,-0.07,-0.04,-0.07,0,-0.12,-0.17,-0.02,-0.04,-0.05,-0.04,-0.09,-0.07
Copaene,-0.01,-0.08,0.02,0.03,0.29,0.13,0.14,0.22,-0.03,0.02,0.01,0.03,-0.02,-0.02,0.01,0.01,-0.05,0.06,0.01,0.01,-0.01,,0.07,0.25,0.03,0.6,0.22,0.4,0.66,0.41,-0.07,0.3,0.08,0.03,-0.21,0.44,0.33,0.44,0.01,0.62,0.53,0.18,0.24,0.73,0.56,0.53,0.26
beta.Ylangene,-0.01,-0.03,0.01,0.01,0.08,0.03,0.04,0.08,-0.01,0.01,0.03,0.01,-0.11,0,0.01,0,-0.17,0.03,0.04,0,-0.01,0.06,,0.07,0,0.1,0.12,0.13,0.08,0.11,-0.05,-0.01,0.04,0.02,-0.05,0.11,0.08,0.11,0,0.09,0.08,0.01,0.16,0.08,0.04,0.06,0.05
Caryophyllene,0.1,-0.01,0.22,0.15,0.74,0.59,0.53,0.32,0.02,0.02,0.07,0.03,0.01,0,0.13,0.11,0.01,0.22,0.17,0.01,-0.3,0.27,0.09,,0.02,0.3,0.46,0.23,0.26,0.21,-0.02,0.13,0.07,0.02,-0.02,0.25,0.1,0.3,0.01,0.44,0.52,0.05,0.14,0.28,0.15,0.27,0.13
cis..alpha..Bergamotene,0.02,-0.05,-0.01,0.09,0.07,0.05,0.07,-0.01,-0.01,-0.02,0.01,0.03,0.03,-0.1,-0.01,-0.03,-0.03,0.02,0.02,0.02,0,0.03,0,0.02,,-0.05,0.01,-0.01,0.03,0.03,0.17,-0.04,0.02,0.01,0,-0.03,-0.01,-0.05,0.1,0.02,-0.01,0.05,0,0.06,0.02,0.05,0.03
Cadina.3.5.diene,0.05,-0.11,0.06,0,0.38,0.21,0.19,0.34,0,0.03,0.01,0.09,0.02,0,0.2,0.1,0.11,0.08,0.05,0.03,-0.11,0.59,0.12,0.28,-0.05,,0.34,0.68,0.57,0.64,-0.24,0.4,0.12,0.06,-0.22,0.77,0.35,0.74,0,0.56,0.53,0.13,0.32,0.77,0.5,0.64,0.46
Humulene,0.14,-0.05,0.05,0,0.29,0.2,0.19,0.32,0,0.01,0.01,0.05,0.02,0.01,0.07,0.06,0.03,0.13,0.04,-0.01,-0.09,0.19,0.13,0.44,0.01,0.33,,0.3,0.18,0.38,-0.1,0.16,0.04,0.06,-0.11,0.28,0.11,0.5,0.03,0.33,0.37,0.04,0.19,0.31,0.09,0.23,0.09
X....epi.Bicyclosesquiphellandrene,0.02,-0.06,0.04,0,0.28,0.15,0.13,0.35,0.01,-0.06,0.01,0.1,0.02,0.01,0.12,0.07,-0.09,0.09,0.05,0.03,-0.08,0.41,0.16,0.22,-0.01,0.69,0.34,,0.42,0.63,-0.12,0.24,0.08,0.05,-0.18,0.84,0.42,0.49,-0.03,0.46,0.4,0.07,0.39,0.58,0.36,0.55,0.28
gamma.Muurolene,0.03,-0.09,0.02,0.01,0.35,0.17,0.15,0.25,-0.03,0.03,0.03,0.03,-0.03,-0.03,0.04,0,-0.05,0.07,0.06,0.02,-0.05,0.68,0.11,0.26,0.04,0.59,0.2,0.43,,0.42,-0.03,0.3,0.09,0.07,-0.22,0.48,0.32,0.51,0.02,0.52,0.42,0.15,0.25,0.72,0.52,0.53,0.31
alpha.Amorphene,0.02,-0.13,0.08,0,0.23,0.15,0.13,0.26,0.01,0,0.04,0.1,0.03,0,0.14,0.02,0.1,0.07,0.07,0.05,-0.09,0.41,0.13,0.2,0.03,0.66,0.41,0.64,0.41,,-0.2,0.3,0.1,0.04,-0.16,0.74,0.47,0.42,-0.04,0.39,0.37,0.08,0.28,0.54,0.39,0.52,0.28
alpha.Bergamotene,-0.04,0.05,-0.03,0.03,0.02,0,0,-0.03,-0.05,0.02,-0.02,-0.03,-0.04,-0.11,-0.03,-0.08,-0.13,0,0,-0.03,0,-0.03,-0.02,-0.01,0.09,-0.08,-0.05,-0.05,-0.02,-0.08,,-0.13,-0.14,-0.02,0.04,-0.06,-0.05,-0.08,0.03,-0.04,-0.05,-0.13,-0.01,-0.05,-0.09,-0.01,0.02
Germacrene.D,0.07,-0.12,0.05,0,0.13,0.09,0.08,0.17,0,0.03,0.02,0.04,0.02,0.01,0.14,0.04,0.02,0.05,0,0.03,-0.07,0.28,-0.02,0.11,-0.04,0.39,0.16,0.22,0.29,0.28,-0.23,,0.06,0.05,-0.19,0.24,0.17,0.3,0.01,0.27,0.24,0.19,0.08,0.43,0.37,0.41,0.18
Longipinene,-0.02,-0.03,0.03,0.06,0.16,0.11,0.12,0.09,0,0,0.03,0.03,-0.01,-0.04,0.01,0.03,-0.07,0.07,0.06,0.01,-0.02,0.11,0.06,0.1,0.03,0.13,0.05,0.11,0.12,0.12,-0.1,0.05,,-0.16,-0.08,0.12,0.1,0.07,-0.02,0.12,0.1,0.01,0.08,0.16,0.09,0.16,0.05
alpha.Cedrene,0.07,-0.08,0,-0.01,0.03,0.01,0,0.01,-0.02,0.05,-0.01,0.03,0,0.04,0.05,0,0,0.01,0.02,0.05,-0.01,0.04,0.03,0.02,0.02,0.07,0.07,0.05,0.07,0.04,0,0.07,-0.18,,-0.09,0.06,0.01,0.13,0.14,0.06,0.05,0.05,0.03,0.08,0.05,0.09,0.08
beta.Selinene,0,0.07,0.05,0.03,-0.01,0.01,0.01,-0.07,0.07,-0.03,-0.02,-0.01,0.03,-0.01,-0.01,0.02,0.06,0.01,0.06,0.07,-0.01,-0.21,-0.05,-0.01,0,-0.23,-0.11,-0.19,-0.22,-0.16,0.06,-0.19,-0.08,-0.08,,-0.15,-0.09,-0.18,-0.02,-0.12,-0.08,-0.06,-0.08,-0.35,-0.18,-0.22,-0.09
Epizonarene,0.04,-0.08,0.07,0,0.3,0.17,0.16,0.29,0.01,0.03,0.01,0.11,0.03,0,0.16,0.08,-0.13,0.09,0.08,0.03,-0.07,0.43,0.14,0.23,-0.03,0.75,0.32,0.81,0.44,0.69,-0.24,0.26,0.13,0.05,-0.15,,0.45,0.56,-0.03,0.46,0.43,0.09,0.4,0.57,0.42,0.52,0.3
alpha.Muurolene,0,-0.06,0.04,0,0.13,0.08,0.07,0.13,0.01,0,0.06,0.08,-0.02,0,0.04,0.01,-0.07,0.1,0.07,0.03,-0.04,0.4,0.1,0.11,-0.01,0.44,0.11,0.54,0.37,0.56,-0.08,0.17,0.09,0.01,-0.09,0.65,,0.24,-0.08,0.35,0.31,0.15,0.28,0.37,0.46,0.4,0.13
beta.Cadinene,0.1,-0.11,0.04,0,0.31,0.16,0.14,0.34,-0.01,0.06,0.01,0.05,0.04,0,0.08,0.05,0.1,0.06,0.01,0.01,-0.07,0.44,0.12,0.27,-0.06,0.73,0.46,0.49,0.47,0.43,-0.27,0.35,0.1,0.1,-0.19,0.54,0.24,,0.05,0.51,0.46,0.07,0.31,0.63,0.31,0.48,0.3
gamma.Bisabolene,0.04,-0.04,-0.03,0.04,0.03,0.01,0.01,0,-0.08,0.03,-0.01,-0.02,-0.06,-0.01,-0.01,-0.02,0.09,0,-0.06,-0.02,0,0.01,0,0.01,0.1,0,0.03,-0.02,0.02,-0.04,0.07,0.01,-0.02,0.12,-0.02,-0.02,-0.07,0.04,,0.01,0.01,0.02,-0.02,0.02,0,0,0.02
gamma.Cadinene,0.03,-0.08,0.09,0.09,0.68,0.43,0.39,0.35,0.02,0.03,0.01,0.06,-0.01,0,0.1,0.04,0.05,0.15,0.09,0.03,-0.19,0.67,0.13,0.54,0.02,0.66,0.38,0.52,0.59,0.44,-0.06,0.31,0.11,0.06,-0.15,0.56,0.37,0.59,0.01,,0.87,0.2,0.29,0.7,0.45,0.6,0.45
delta.Amorphene,0.05,-0.05,0.15,0.1,0.72,0.5,0.45,0.36,0.02,0.03,0.02,0.07,0,0,0.13,0.07,0.05,0.18,0.13,0.03,-0.25,0.57,0.11,0.65,-0.02,0.61,0.41,0.46,0.49,0.42,-0.09,0.28,0.1,0.05,-0.09,0.52,0.33,0.52,0.01,0.88,,0.18,0.26,0.58,0.41,0.54,0.38
trans.Calamenene,0.04,-0.16,0.01,-0.02,0.08,0.03,0.02,0.01,-0.01,0.01,0.01,0.01,0.01,0,0.02,-0.01,0.02,0.02,0,0.04,-0.02,0.23,0.01,0.07,0.06,0.15,0.04,0.08,0.19,0.09,-0.07,0.21,0.01,0.05,-0.07,0.1,0.16,0.08,0.02,0.19,0.17,,0.01,0.21,0.31,0.18,0.07
Cadine.1.4.diene,0.06,0,0.01,-0.01,0.15,0.06,0.05,0.28,0.01,0.08,-0.01,0.03,-0.02,0.02,0.02,0,-0.04,0.04,0.02,0,-0.05,0.24,0.21,0.13,0,0.36,0.22,0.44,0.25,0.3,0,0.08,0.09,0.03,-0.09,0.47,0.26,0.38,-0.02,0.26,0.24,0.01,,0.32,0.16,0.3,0.11
alpha.Cadinene,0.02,-0.12,0.02,0.01,0.33,0.15,0.13,0.31,-0.03,0.03,0.02,0.05,-0.02,0,0.08,0.02,-0.08,0.05,0.01,0.01,-0.04,0.71,0.1,0.25,0.05,0.75,0.34,0.55,0.67,0.52,-0.16,0.4,0.11,0.06,-0.29,0.57,0.37,0.63,0.02,0.65,0.58,0.2,0.27,,0.53,0.67,0.43
alpha.Calacorene,0.01,-0.09,0.03,0,0.18,0.1,0.08,0.12,0,0.02,0.01,0.06,0.02,-0.01,0.04,0.04,0.04,0.07,0.04,0.03,-0.03,0.63,0.04,0.16,0.03,0.54,0.1,0.38,0.57,0.41,-0.15,0.39,0.07,0.04,-0.21,0.44,0.43,0.29,0,0.42,0.38,0.29,0.16,0.56,,0.56,0.24
tau.Cadinol,0.05,-0.09,0.08,0.02,0.33,0.21,0.19,0.32,0.08,0.02,0.01,0.14,0.01,0.01,0.14,0.05,-0.01,0.16,0.07,0.06,-0.1,0.5,0.08,0.24,0.04,0.63,0.23,0.52,0.48,0.47,-0.01,0.37,0.09,0.08,-0.19,0.55,0.31,0.48,0,0.48,0.43,0.12,0.25,0.69,0.49,,0.35
tau.Muurolol,-0.01,-0.07,0.05,0.02,0.27,0.17,0.15,0.1,0,0.04,0,0.07,0,0.01,0.07,0,-0.02,0.04,0.01,0.02,-0.06,0.28,0.07,0.13,0.02,0.43,0.1,0.26,0.3,0.24,0.01,0.18,0.02,0.07,-0.09,0.31,0.12,0.33,0.02,0.32,0.27,0.06,0.1,0.44,0.23,0.35,