duncanobrien/plankton-FD-v1.0.0.zip
duncanobrien-plankton-FD-25669a0
.gitignore
73 Bytes
Code
Figure1.R
6.3 kB
Figure2.R
4.2 kB
Figure3.R
4.2 kB
Figure4.R
5.1 kB
README.md
2.2 kB
calc_FD.R
14.3 kB
calc_permuted_ccf.R
35.1 kB
calc_permuted_ccm.R
40.5 kB
calc_system_states.R
20.2 kB
ccm_perm_fn.R
11.3 kB
diff_perm_ccf_fn.R
18.9 kB
fisher_information
CalcMeanFishfunc.R
2.4 kB
FI Doc.pdf
5.1 MB
G.Fisherfunction.R
3.7 kB
NFisherpdffunc.R
2.8 kB
README.md
815 Bytes
SmoothFIfunc.R
972 Bytes
roundTOfunc.R
337 Bytes
melodic_fn.R
3.1 kB
mvi_fn.R
683 Bytes
supplementary_figures.R
19.9 kB
tidy_FD_fn.R
11.2 kB
Data
all.system.states.RData
100.3 kB
fuzzy_phytoplankton_traits.xlsx
910.7 kB
fuzzy_zooplankton_traits.xlsx
484.5 kB
raw_FD
FD_LZ_phyto_mth_raw.csv
66.0 kB
FD_LZ_phyto_yr_raw.csv
5.3 kB
FD_LZ_zoo_mth_raw.csv
65.4 kB
FD_LZ_zoo_yr_raw.csv
5.3 kB
FD_kas_phyto_mth_raw.csv
75.7 kB
FD_kas_phyto_yr_raw.csv
6.3 kB
FD_kas_zoo_mth_raw.csv
76.0 kB
FD_kas_zoo_yr_raw.csv
6.3 kB
FD_kin_phyto_mth_raw.csv
93.1 kB
FD_kin_phyto_yr_raw.csv
7.4 kB
FD_kin_zoo_mth_raw.csv
91.7 kB
FD_kin_zoo_yr_raw.csv
7.0 kB
FD_mad_phyto_mth_raw.csv
47.3 kB
FD_mad_phyto_yr_raw.csv
3.9 kB
FD_mad_zoo_mth_raw.csv
47.3 kB
FD_mad_zoo_yr_raw.csv
3.9 kB
FD_wind_phyto_mth_raw.csv
47.9 kB
FD_wind_phyto_yr_raw.csv
3.6 kB
FD_wind_zoo_mth_raw.csv
44.4 kB
FD_wind_zoo_yr_raw.csv
3.5 kB
README.md
1.8 kB
Results
ccf
Figure2.pdf
29.1 kB
ccf_tables
supplementary_table1.csv
1.7 kB
supplementary_table2.csv
2.1 kB
raw_data
raw.ccf.RData
43.1 MB
summary.ccf.csv
117.6 kB
supplementary_figure3.pdf
697.0 kB
supplementary_figure4.pdf
710.1 kB
supplementary_figure5.pdf
12.8 kB
ccm
Figure3.pdf
29.6 kB
Figure4.pdf
39.2 kB
ccm_tables
supplementary_table3.csv
1.7 kB
supplementary_table4.csv
1.7 kB
supplementary_table5.csv
1.4 kB
supplementary_table6.csv
2.1 kB
supplementary_table7.csv
2.1 kB
supplementary_table8.csv
1.6 kB
raw_data
LZ_ccm_lag.csv
344.7 kB
LZ_ccm_raw.csv
40.6 MB
LZ_ccm_summary.csv
12.8 kB
ccm_lag.csv
1.7 MB
ccm_raw.RData
49.8 MB
ccm_summary.csv
62.3 kB
kas_ccm_lag.csv
338.2 kB
kas_ccm_raw.csv
40.0 MB
kas_ccm_summary.csv
12.7 kB
kin_ccm_lag.csv
331.1 kB
kin_ccm_raw.csv
39.4 MB
kin_ccm_summary.csv
12.4 kB
mad_ccm_lag.csv
326.6 kB
mad_ccm_raw.csv
39.0 MB
mad_ccm_summary.csv
12.4 kB
wind_ccm_lag.csv
338.7 kB
wind_ccm_raw.csv
39.9 MB
wind_ccm_summary.csv
12.7 kB
supplementary_figure10.pdf
682.4 kB
supplementary_figure6.pdf
702.3 kB
supplementary_figure7.pdf
701.9 kB
supplementary_figure8.pdf
683.8 kB
supplementary_figure9.pdf
20.9 kB
raw_visualisations
FD_traitspace_concept.pdf
142.6 kB
FD_traitspace_concept.tiff
144.3 kB
Figure1.pdf
1.3 MB
lake_overview_map.png
470.7 kB
plankton-FD.Rproj
205 Bytes
vert.txt
73 Bytes