neurostuff/NiMARE: 0.0.12

<!-- Release notes generated using configuration in .github/release.yml at main --> This release continues ongoing work on improving memory usage. We have eliminated the memory_limit option in our Estimators in favor of using sparse arrays. We expect to see a corresponding increase in fit times, especially for Monte Carlo FWE correction- however, we plan to address this in future releases.

• Replace multiprocessing with joblib for parallelization and change n_cores default to 1 by @tsalo in https://github.com/neurostuff/NiMARE/pull/597
• Incorporate joblib into ALESubtraction and fix SCALE docstring by @tsalo in https://github.com/neurostuff/NiMARE/pull/641
• Stop storing MetaResults as attributes of fitted Estimators by @tsalo in https://github.com/neurostuff/NiMARE/pull/657
• Refactor Correctors and remove statsmodels requirement by @tsalo in https://github.com/neurostuff/NiMARE/pull/679 ### 🎉 Exciting New Features
• Add FocusCounter diagnostic tool by @tsalo in https://github.com/neurostuff/NiMARE/pull/649
• Support cluster-level Monte Carlo FWE correction in the MKDAChi2 Estimator by @tsalo in https://github.com/neurostuff/NiMARE/pull/650
• Support vfwe_only in CBMAEstimator even when null_method isn't montecarlo by @tsalo in https://github.com/neurostuff/NiMARE/pull/678
• Add warning when coordinates dataset contains both positive and negative z_stats by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/699
• Add parameter estimate standard error to IBMA results by @tsalo in https://github.com/neurostuff/NiMARE/pull/691
• Use sparse array in ALE, ALESubtraction, SCALE, KDA, and MKDADensity by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/725 ### 🐛 Bug Fixes
• Retain updated Estimator in Corrector-generated MetaResults by @tsalo in https://github.com/neurostuff/NiMARE/pull/633
• Do not inherit IBMAEstimator's aggressive_mask from previous Datasets by @tsalo in https://github.com/neurostuff/NiMARE/pull/652
• Use beta maps in PermutedOLS instead of z maps by @tsalo in https://github.com/neurostuff/NiMARE/pull/715 ### Other Changes
• Reduce SCALE memory usage by @tsalo in https://github.com/neurostuff/NiMARE/pull/632
• Improve memory management in MKDAChi2 Estimator by @tsalo in https://github.com/neurostuff/NiMARE/pull/638
• Remove Peaks2Maps-related tests by @tsalo in https://github.com/neurostuff/NiMARE/pull/643
• Disable MA map pre-generation in CorrelationDecoder by @tsalo in https://github.com/neurostuff/NiMARE/pull/637
• Switch testing from CircleCI to GitHub Actions by @tsalo in https://github.com/neurostuff/NiMARE/pull/642
• Override unusable methods and improve documentation by @tsalo in https://github.com/neurostuff/NiMARE/pull/645
• Document other meta-analysis tools outside our ecosystem by @tsalo in https://github.com/neurostuff/NiMARE/pull/654
• Reorganize and streamline examples by @tsalo in https://github.com/neurostuff/NiMARE/pull/656
• Convert CBMAEstimator method to function by @tsalo in https://github.com/neurostuff/NiMARE/pull/658
• Add explicit support for Python 3.10 by @tsalo in https://github.com/neurostuff/NiMARE/pull/648
• Use BibTeX citations in documentation by @tsalo in https://github.com/neurostuff/NiMARE/pull/670
• Replace relative imports with absolute ones by @tsalo in https://github.com/neurostuff/NiMARE/pull/674
• Simplify organization of base classes by @tsalo in https://github.com/neurostuff/NiMARE/pull/675
• Note why we don't implement TFCE in NiMARE (currently) by @tsalo in https://github.com/neurostuff/NiMARE/pull/680
• Dropping the memory-mapping option for Estimators and kernel transformers by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/681
• Optimize locating coordinates in convert_neurosynth_to_dataset by @ryanhammonds in https://github.com/neurostuff/NiMARE/pull/682
• Reduce memory usage of KernelTransformer.transform and meta.utils.compute_kda_ma by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/676
• Generate automatic CHANGELOG from release note and add it to docs by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/684
• Add manual changelog to documentation by @tsalo in https://github.com/neurostuff/NiMARE/pull/635
• Automatically update CHANGELOG.md for prereleases as well by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/688
• Fix tag-name issue in update-changelog workflow by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/689
• Optimize numpy operations in MKDADensity Estimator and (M)KDAKernel by @adelavega in https://github.com/neurostuff/NiMARE/pull/685
• Add PAT to automatically commit release notes to CHANGELOG.md by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/695
• Fix CHANGELOG formatting issues by @JulioAPeraza in https://github.com/neurostuff/NiMARE/pull/701
• Add citation information to documentation by @tsalo in https://github.com/neurostuff/NiMARE/pull/712
• Add a glossary page to the documentation by @tsalo in https://github.com/neurostuff/NiMARE/pull/706
• Remove extraneous copy() statements by @jdkent in https://github.com/neurostuff/NiMARE/pull/662
• Add information about maintaining NiMARE to developer's guide by @tsalo in https://github.com/neurostuff/NiMARE/pull/703
• Pin minimum version of pandas by @jdkent in https://github.com/neurostuff/NiMARE/pull/722

• @ryanhammonds made their first contribution in https://github.com/neurostuff/NiMARE/pull/682
• @adelavega made their first contribution in https://github.com/neurostuff/NiMARE/pull/685

Full Changelog: https://github.com/neurostuff/NiMARE/compare/0.0.11...0.0.12