hpgem/nanomesh-0.9.0.zip
hpgem-nanomesh-06e7648
.bumpversion.cfg
654 Bytes
.editorconfig
503 Bytes
.github
workflows
publish.yml
557 Bytes
test.yaml
1.7 kB
update_dependencies.yaml
2.1 kB
.gitignore
278 Bytes
.pre-commit-config.yaml
1.4 kB
.readthedocs.yaml
413 Bytes
CITATION.cff
846 Bytes
CODE_OF_CONDUCT.md
3.2 kB
CONTRIBUTING.md
3.3 kB
LICENSE
11.4 kB
MANIFEST.in
217 Bytes
README.md
6.2 kB
constraints.txt
3.0 kB
docs
Makefile
767 Bytes
_static
banner.png
91.6 kB
flowchart_structure.mmd
1.1 kB
flowchart_structure.svg
21.0 kB
meshing_dash.png
154.9 kB
metrics_dash.png
70.3 kB
_templates
README.md
104 Bytes
module.rst_t
133 Bytes
package.rst_t
283 Bytes
toc.rst_t
127 Bytes
api.data.rst
918 Bytes
api.helpers.rst
609 Bytes
api.image_data.rst
825 Bytes
api.mesh_data.rst
1.5 kB
api.meshing.rst
979 Bytes
api.metrics.rst
1.4 kB
api.plotting.rst
541 Bytes
api.rst
1.2 kB
conf.py
3.8 kB
development.rst
1.9 kB
examples
examples_customize_regions_in_a_2d_mesh.nblink
79 Bytes
examples_generate_a_2d_triangular_mesh.nblink
91 Bytes
examples_generate_a_tetrahedral_mesh_from_3d_cells_data.nblink
98 Bytes
examples_multi-domain_mesh_from_simulated_data.nblink
98 Bytes
examples_pad_a_2d_mesh.nblink
64 Bytes
examples_pad_a_3d_mesh.nblink
64 Bytes
finite_elements_fluid_dynamics_with_sfepy.nblink
78 Bytes
finite_elements_poisson_equation_with_getfem.nblink
77 Bytes
finite_elements_poisson_equation_with_scikit-fem.nblink
81 Bytes
generate_nblink.py
1.3 kB
index.rst
522 Bytes
nanopores_calculate_mesh_quality_metrics.nblink
82 Bytes
nanopores_examine_nanopore_properties.nblink
97 Bytes
nanopores_generate_a_2d_triangular_mesh.nblink
100 Bytes
nanopores_generate_a_3d_tetrahedral_mesh.nblink
102 Bytes
nanopores_how_to_crop_meshes.nblink
62 Bytes
nanopores_memory-map_a_large_data_set.nblink
77 Bytes
nanopores_segment_image_data_using_local_thresholds.nblink
93 Bytes
nanopores_select_a_region_of_interest.nblink
93 Bytes
nanopores_select_a_region_of_interest_using_ffts.nblink
90 Bytes
other_generate_banner.nblink
52 Bytes
other_hello_world!.nblink
52 Bytes
index.rst
2.8 kB
install.rst
1.3 kB
make.bat
776 Bytes
make_docs.bat
79 Bytes
nanomesh
image.rst
158 Bytes
image2mesh._mesher2d.rst
189 Bytes
image2mesh._mesher3d.rst
189 Bytes
image2mesh.rst
242 Bytes
io.rst
107 Bytes
mesh.rst
174 Bytes
mesh_container.rst
180 Bytes
metrics.rst
135 Bytes
plotting.rst
219 Bytes
region_markers.rst
158 Bytes
utils.rst
116 Bytes
requirements.txt
158 Bytes
structure.rst
172 Bytes
environment.yml
121 Bytes
nanomesh
__init__.py
1.0 kB
_constants.py
119 Bytes
_doc.py
5.8 kB
_tetgen_wrapper.py
4.8 kB
_triangle_wrapper.py
3.9 kB
data
__init__.py
2.8 kB
nanopores3d.npy
8.0 MB
nanopores_gradient.npy
532.1 kB
image
__init__.py
341 Bytes
_image.py
9.5 kB
_plane.py
7.7 kB
_roi2d.py
6.0 kB
_utils.py
3.8 kB
_volume.py
4.5 kB
image2mesh
__init__.py
215 Bytes
_mesher.py
1.9 kB
_mesher2d
__init__.py
173 Bytes
_helpers.py
5.5 kB
_mesher.py
11.0 kB
_polygon.py
5.8 kB
_mesher3d
__init__.py
234 Bytes
_bounding_box.py
2.0 kB
_helpers.py
5.8 kB
_mesher.py
10.5 kB
io.py
2.4 kB
mesh
__init__.py
251 Bytes
_line.py
3.0 kB
_mesh.py
11.3 kB
_mixin.py
654 Bytes
_tetra.py
3.4 kB
_triangle.py
4.6 kB
mesh_container.py
13.9 kB
metrics.py
10.3 kB
plotting
__init__.py
393 Bytes
_meshplot.py
13.9 kB
_widgets.py
4.1 kB
region_markers.py
5.0 kB
utils.py
2.6 kB
notebooks
examples
how_to_crop_meshes.ipynb
804.6 kB
how_to_crop_meshes.md
1.7 kB
how_to_customize_regions_in_2d_mesh.ipynb
541.5 kB
how_to_customize_regions_in_2d_mesh.md
3.6 kB
how_to_do_3d_multi-domain_meshing_using_simulated_data.ipynb
1.4 MB
how_to_do_3d_multi-domain_meshing_using_simulated_data.md
4.3 kB
how_to_generate_a_tetrahedral_mesh_from_3d_cells_image.ipynb
3.7 MB
how_to_generate_a_tetrahedral_mesh_from_3d_cells_image.md
7.1 kB
how_to_generate_a_triangle_mesh_from_a_2d_image.ipynb
597.2 kB
how_to_generate_a_triangle_mesh_from_a_2d_image.md
5.6 kB
how_to_pad_a_2d_mesh.ipynb
1.4 MB
how_to_pad_a_2d_mesh.md
4.0 kB
how_to_pad_a_3d_mesh.ipynb
1.2 MB
how_to_pad_a_3d_mesh.md
2.4 kB
finite_elements
how_to_poisson_with_getfem.ipynb
493.8 kB
how_to_poisson_with_getfem.md
3.3 kB
how_to_poisson_with_scikit-fem.ipynb
1.1 MB
how_to_poisson_with_scikit-fem.md
4.6 kB
how_to_use_with_sfepy_horse.ipynb
1.3 MB
how_to_use_with_sfepy_horse.md
7.4 kB
nanopores
how_to_calculate_cell_quality_metrics.ipynb
1.5 MB
how_to_calculate_cell_quality_metrics.md
2.6 kB
how_to_examine_nanopore_properties_using_regionprops.ipynb
6.9 MB
how_to_examine_nanopore_properties_using_regionprops.md
4.0 kB
how_to_generate_a_tetrahedral_mesh_from_3d_nanopores_data.ipynb
4.7 MB
how_to_generate_a_tetrahedral_mesh_from_3d_nanopores_data.md
7.7 kB
how_to_generate_a_triangle_mesh_from_a_2d_nanopore_data.ipynb
4.5 MB
how_to_generate_a_triangle_mesh_from_a_2d_nanopore_data.md
7.2 kB
how_to_process_a_large_data_file.ipynb
17.5 MB
how_to_process_a_large_data_file.md
2.0 kB
how_to_segment_image_data_using_local_thresholds.ipynb
1.6 MB
how_to_segment_image_data_using_local_thresholds.md
6.9 kB
how_to_select_a_region_of_interest_from_an_image.ipynb
389.2 kB
how_to_select_a_region_of_interest_from_an_image.md
2.4 kB
how_to_select_a_region_of_interest_using_ffts.ipynb
870.7 kB
how_to_select_a_region_of_interest_using_ffts.md
3.3 kB
other
banner.png
91.6 kB
hello_world.ipynb
499.1 kB
hello_world.md
2.8 kB
hello_world_files
hello_world_11_1.png
18.3 kB
hello_world_5_1.png
9.8 kB
hello_world_9_1.png
339.2 kB
make_banner.ipynb
335.1 kB
make_banner.md
1.9 kB
source_text.png
16.4 kB
source_text_no_o.png
14.3 kB
source_text_o.png
3.6 kB
readme.md
1.7 kB
requirements.txt
7 Bytes
test_notebooks.PS1
1.0 kB
test_notebooks.sh
1.0 kB
pyproject.toml
98 Bytes
setup.cfg
2.2 kB
setup.py
38 Bytes
tests
baseline_images
test_image_plots
compare_with_digitized.png
2.4 kB
compare_with_other.png
3.4 kB
plane_show.png
15.1 kB
show_image.png
13.5 kB
test_metrics
test_metrics_histogram.png
11.8 kB
test_metrics_plot2d.png
64.2 kB
test_plotting
compare_mesh_with_image.png
5.9 kB
contour_plot_all.png
62.6 kB
contour_plot_fields.png
58.3 kB
contour_plot_floating.png
69.0 kB
line_mesh.png
9.4 kB
linetrianglemeshplot.png
14.8 kB
pointsplot.png
4.4 kB
triangle_mesh.png
11.4 kB
triangle_mesh_hide_A.png
9.1 kB
triangle_mesh_show_A.png
9.1 kB
conftest.py
3.9 kB
expected_tetra_mesh.msh
12.8 kB
helpers
__init__.py
1.5 kB
sample_data.vol
24 Bytes
sample_data.vol.info
258 Bytes
segmented_image.npy
320.1 kB
segmented_mesh_2d.msh
149.6 kB
segmented_mesh_3d.msh
260.3 kB
test_data.py
842 Bytes
test_docs.py
1.1 kB
test_image_plots.py
839 Bytes
test_io.py
655 Bytes
test_mesh.py
4.0 kB
test_mesh2d.py
3.2 kB
test_mesh3d.py
2.7 kB
test_mesh_container.py
3.5 kB
test_mesher2d_helpers.py
4.0 kB
test_mesher3d_helpers.py
3.9 kB
test_metrics.py
968 Bytes
test_nblink.py
527 Bytes
test_plane.py
3.8 kB
test_plotting.py
2.4 kB
test_region_markers.py
2.4 kB
test_roi2d.py
884 Bytes
test_subclassing.py
1.4 kB
test_tetgen.py
3.0 kB
test_triangulate.py
1.0 kB
test_utils.py
1.9 kB
test_volume.py
2.8 kB
triangle
Aq30a2.msh
5.5 kB
pAa2.msh
5.2 kB
pAq30a.msh
8.1 kB
pAq30a2.msh
5.3 kB
pa2.msh
5.2 kB
q30a2.msh
5.5 kB