This function is related to plot_scatterviolin, but this one maps a single or same colour, therefore _sc. The only new argument is colour, which can be any hexcode or name of colours in the all_grafify palette. The default colour is ok_orange. ColPal and ColRev arguments are not available. Colours available can be seen quickly with plot_grafify_palette.

plot_scatterviolin_sc(
  data,
  xcol,
  ycol,
  colour = "ok_orange",
  symsize = 2.5,
  symthick = 1,
  bwid = 0.2,
  bvthick = 1,
  b_alpha = 1,
  v_alpha = 1,
  s_alpha = 1,
  jitter = 0,
  trim = TRUE,
  scale = "width",
  TextXAngle = 0,
  fontsize = 20,
  ...
)

Arguments

data

a data table object, e.g. data.frame or tibble.

xcol

name of the column to plot on X axis. This should be a categorical variable.

ycol

name of the column to plot on quantitative Y axis. This should be a quantitative variable.

colour

colour of boxes and dots; a number between 1-64, any hexcode or names from grafify colour palettes. Default is ok_orange.

symsize

size of dots relative to binwidth used by geom_point. Default set to 2.5, increase/decrease as needed.

symthick

thickness of dot border (stroke parameter of geom_point), default set to 1.

bwid

width of boxplots; default 0.2

bvthick

thickness of both violin and box plot lines; default 1.

b_alpha

fractional opacity of boxplots, default set to 1 (i.e. maximum opacity & zero transparency). For white boxplots inside violins, set b_alpha = 0.

v_alpha

fractional opacity of violins, default set to 1 (i.e. maximum opacity & zero transparency). Set s_alpha = 0 to not show scatter plot.

s_alpha

fractional opacity of symbols, default set to 1 (i.e. maximum opacity & zero transparency).

jitter

extent of jitter (scatter) of symbols, default is 0 (i.e. aligned symbols). To reduce symbol overlap, try 0.1-0.3 or higher.

trim

set whether tips of violin plot should be trimmed at high/low data. Default trim = TRUE, can be changed to FALSE.

scale

set to "area" by default, can be changed to "count" or "width".

TextXAngle

orientation of text on X-axis; default 0 degrees. Change to 45 or 90 to remove overlapping text.

fontsize

parameter of base_size of fonts in theme_classic, default set to size 20.

...

any additional arguments to pass to ggplot2geom_boxplot, ggplot2geom_point or ggplot2geom_violin.

Value

This function returns a ggplot2 object of class "gg" and "ggplot".

Examples

plot_scatterviolin_sc(data = data_doubling_time, 
xcol = Student, ycol = Doubling_time, 
colour = "ok_grey", 
symsize = 2, trim = FALSE, scale = "width")


#white boxplots and no symbols
plot_scatterviolin_sc(data = data_1w_death, 
xcol = Genotype, ycol = Death, 
colour = "pale_blue", b_alpha = 0, s_alpha = 0,
symsize = 2, trim = FALSE, scale = "width")