oncoKB_annotate OncoKB annotator for MAF files.
oncoKB_annotate(maf, cancer_types, parallelize = T)
maf | A MAF file to be annotated. |
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cancer_types | Data frame with samples mapped to cancer type for accurate levels of actionability. Default is NULL. |
parallelize | Should this be done in parallel. Default is TRUE |
OncoKb annotate MAF.
library(gnomeR)