Co-mutation Heatmap of the Top Altered Genes

ggcomut(maf, n_genes = 10, ...)

Arguments

maf

Raw maf dataframe containing alteration data

n_genes

Number of top genes to display in plot

...

Further binmat() arguments

Value

Comutation heatmap of the top genes

Examples

ggcomut(mut)
#> Warning: MUTATION DATA: To ensure gene with multiple names/aliases are correctly grouped together, the #> following genes in your maf dataframe have been recoded. You can supress this with recode.aliases = FALSE #> #> AMER1 recoded to FAM123B
#> Warning: The following genes in the final matrix were not part of the official IMPACT panel and thus couldn't be annotated for missing status. To see a complete list of genes in IMPACT please see 'impact_gene_info': FIP1L1, INSRR