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Published July 16, 2021 | Version 2.1.0
Software Open

LayNii: A software suite for layer-fMRI

Description

Purpose of the release

LN2_MULTILATERATE and LN2_PATCH_FLATTEN focused release to serve as a checkpoint for:

  • Gulban, O. F., Bollmann, S., Huber, R., Wagstyl, K., Goebel, R., Poser, B. A., Kay, K., Ivanov, D. (2021). Mesoscopic Quantification of Cortical Architecture in the Living Human Brain. BioRxiv. https://doi.org/10.1101/2021.11.25.470023
Modifications
  • LN2_LAYERS now outputs approximately equal number of voxels for each layer with -equal_counts flag. This option can be useful for low resolution inputs (e.g. > 0.5 mm iso.). Note: when activating this flag, it will equalize the number of voxels for each layer without respecting equi-distant and equi-volume cortical depth measurements.
  • LN_RAGRUG now has -scale parameter to create rectangular tessellations at lower resolutions (integer multiples of the input voxel dimensions.
  • Binaries for MACOS M1 chip will be included from now on.
  • [v2.2.1] Minor fixes to outputs of LN2_MULTILATERATE and help menu improvements.

Notes

If you use this software, please cite it as below.

Files

layerfMRI/LAYNII-v2.2.1.zip

Files (80.3 MB)

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Additional details

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