,seq,combination method,orf1_source,orf2_source,orf1start,orf1end,orf2start,orf2end,length,length-orf2end
L1HS,GGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCAGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGTGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1HS.ORF1.hs0_human.pars,L1HS.ORF2.hs0_human.pars,905,1918,1985,5809,6029,220
L1PA2,GGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTGGGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACTCGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCTAGTCAAAGAAAGGGGTGACGGACGGCACCTGGAAAATCGGGTCACTCCCACCCGAATACTGCGCTTTTCCGACGGGCTTAAAAAACGGCGCACCACGAGATTATATCCCGCACCTGGCTCGGAGGGTCCTACGCCCACGGAGTCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTACTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGTGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAAAGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACGGAACAAAGCTGGATGGAGAATGACTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCGATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAACGAGCAAAATAACCAGCTAACATCATATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATGTAAATGGACTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGATCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAAACGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGCCTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAACGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA2.ORF1.hs2_gorilla.marg,L1PA2.ORF2.hs2_gorilla.pars,906,1919,1986,5810,6045,235
L1PA3,GGGGGGCAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGACAGTGGGTGCAGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACTCGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCTAGTCAAAGAAAGGGGTGACAGACGGCACCTGGAAAATCGGGTCACTCCCACCCTAATACTGCGCTTTTCCGACGGGCTTAAAAAACGGCGCACCAGGAGATTATATCCCGCACCTGGCTCGGAGGGTCCTACGCCCACGGAGTCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGTAGGGGCAGACTGACACCTCACACGGCCGGGTACTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGACAGCAGCATTCGCGGTTCACGAAAATCCGCTGTTCTGCAGCCACCGCTGCTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCTAGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGAGGGAAAAAACAGAGCAGAAAACTGGAAACTCTAAAAAGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAATGGAACAAAGCTGGACGGAGAATGACTTTGACGAGCTGAGAGAAGAAGGCACATATCTCAAATTCAGACGATCAAACTACTCTGAGCTACAGGAGGAAATTCAAACCAAAGGCAAAGAAGTTAAAAACTTTGAAAAAAAATTAGACGAATGGATAACTAGAATAACCAATGCAGAGAAGGGCTACCCTCTCTCACCATTAAAGGAGCTGATGGAGCTGAAAGCCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGTAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCGATAGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCAGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCAGATCTCTCGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAAATGGTAAAGACCATCGAGGCTAGGAAGAAACTGCATCAACTAACGAGCAAAATAACCAGCTAACATCATATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATGTAAATGGACTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTTAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATTAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACGCAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGCTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATTGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGACGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAACGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAACTGGAAATCATCATTCTCAGTAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTAGGAGATATACCTAATGCTAAATGACGAGTTAATGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTATAATAATAATAAAATA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA3.ORF1.hs4_gibbon.marg,L1PA3.ORF2.hs3_orang.marg,1035,2073,2140,5964,6185,221
L1PA4,GGGGTGGAGCCAAGATGGCCGAATAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGGTACCGGGTTCATCTCACTGGGGAGTGTCGGACAGTGGGTGCAGGACAGTGGGTGCAGCGCACCGAGCGTGAGCCGAAGCAGGGCGAGGCATCGCCTCACCCGGGAAGCGCAAGGGGTCAGGGAATTCCCTTTCCTAGTCAAAGAAAGGGGTGACAGACGGCACCTGGAAAATCGGGTCACTCCCACCCTAATACTGCGCTTTTCCAACGGTCTTAGCAAACGGCACACCAGGAGATTATATCCCGCGCCTGGCTCGGAGGGTCCTACGCCCACGGAGCCTCGCTCATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCGAGGCTTGAGTAGGTAAACAAAGCGGCCGGGAAGCTCGAACTGGGTGGAGCCCACCGCAGCTCAAGGAGGCCTGCCTGCCTCTGTAGACTCCACCTCTGGGGGCAGGGCATAGCCAAACAAAAGGCAGCAGAAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGACAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGAGTAGCCTAACTGGGAGGCACCCCCCAGTAGGGGCAGACTGACACCTCACACGGCCGGGTACTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGGCAGCAACATTTGCTGTTCACCAATATCCGCTGTTCTGCAGCCTCCGCTGCTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGACTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAACCCCATCTGTACGTCACCATCATCAAAGACCAAAGGTAGATAAAACCACAAAGTGGGGAAAAAACAGAGCAGAAAAACTGGAAACTCTAAAAATCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGCTCCTCACCAGCAACGGAACAAAGCTGGACGGAGAATGACTTTGACGAGTTGAGAGAAGAAGGCTTCAGACGATCAAACTACTCCGAGCTAAAGGAGGAAGTTCGAACCCATGGCAAAGAAGTTAAAAACCTTGAAAAAAAATTAGACGAATGGCTAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGGACCTGATGGAGCTGAAAACCAAGGCACGAGAACTACGTGACGAATGCACAAGCCTCAGTAGCCGATTCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATCAAATGAATGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAACGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAAATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCTGATCTCTCGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGGTAAAGACCATCGAGGCTAGGAAGAAACTGCATCAACTAACGAGCAAAATAACCAGCTAACATCATATGACAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTTAACAAGGATATCCAGGAATTGAACTCAGCTCTGCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCTAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACGCAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGAGGCAATAATTAATAGCTTACCAACCAAAAAAAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCCTGATGAACATCGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACGCAAATCAATAAACGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAGGATACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGACCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACACCGGGGCCTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTAGGAGATATACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAAAAAAAAAAAATAAAATAAAAAAAAAAAAAATTAAAATATATTATTATTCTTAAATACAAAATAATAATAAATAAAATATGCAACACCTTATAATATATTTGGATTATTCTTTTCTTTTAATAAAATTTCGAAATAAATAGATTTAAGAAAGAGCTAAAATACAATTATTGTAGAGAATTTTTGGAATTTTTAAATAAACATAATTGGAAAAGTATTTTCCAAGTCCTAGATCTATTTATTCTGAAAAAGTTTAGACATTGTGATTCAGTTATAATTTAGACATATACTACAAGGTAAATTGCATTTCTGTTAATACTATATTTTTCTAGGTATACAGTTTATAGATAAAAGGGAAAACATTTCAAAATTTAACTCAAACTTGTATAT,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA4.ORF1.hs4_gibbon.marg,L1PA4.ORF2.hs4_gibbon.marg,1027,2040,2107,5931,6537,606
L1PA5,GGGGCGGTTCCAAGATGGCCGAATAGGAACAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGGTACCGGGTTCATCTCACTGGGGCTTGTCGGACAGTGGGTGCAGGACAGTGGGTGCAGCCCACCGAGTGTGAGCCGAAGCAGGGCGAGGCATCGCCTCACCCGGGAAGCGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACAGATGGCACCTGGAAAATCGGGTCACTCCCACCCTAATACTGCGCTTTTCCAATGGTCTTAGCAAACGGCACACCAGGAGATTATATCCCGCGCCTGGCTCGGAGGGTCCCACGCCCACGGAGCCTCGCTCATTGCTAGCACAGCAGTCTGAGATCGAACTGCAAGGCGGCAGCGAGGCTGGGGGAGGGGCGCCCACCATTGCTGAGGCTTGAGTAGGTAAACAAAGCGGCCAGGAAGCTCGAACTGGGTGGAGCCCACCGCAGCTCAAGGAGGCCTGCCTGCCTCTGTAGACTCCACCTCTGGGGGCAGGGCATAGCCGAACAAAAGGCAGCAGAAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGTAGTGGTTCTCCCAGCACGGAGTTTGAGATCTGAGAATGGACAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGAGTAGCCTAACTGGGAGGCACCCCCCAGTAGGGGCAGACTGACACCTCACACGGCCGGGTACCCCTCTGAGACGAAGCTTCCAGAGGAACGATCAGGCAGCAACATTTGCTGTTCAGCAATATTCGCTGTTCTGCAGCCTCCGCTGCTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGTCCTGACTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACCAAAACCCCATCTGTACGTCACCATCATCAAAGACCAAAGGTAGATAAAACCACAAAGTGGGGAAAAAACAGAGCAGAAAAGCTGAAAATTCTAAAAATCAGAGCGCCTCTCCCCCTCCAAAGGAACGCAGCTCCTCGCCAGCAACGGAACAAAGCTGGACGGAGAATGACTTTGACGAGTTGAGAGAAGAAGGCTTCAGACGATCAAACTTCTCCGAGCTAAAGGAGGAAGTTCGAACCCATCGCAAAGAAGCTAAAAACCTTGAAAAAAGATTAGACGAATGGCTAACTAGAATAACCAGTGTAGAGAAGTCCTTAAATGACCTGATGGAGCTGAAAACCATGGCACGAGAACTACGTGACGAATGCACAAGCTTCAGTAGCCGATTCGATCAACTGGAAGAAAGGGTATCAGTGATTGAAGATCAAATGAATGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAAGAGTAAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAACCTAGCAAGGCAGGCCAACATTCAAATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTACAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGGTAAAGACCATCGATGCTAGGAAGAAACTGCATCAACTAACGAGCAAAATAACCAGCTAACATCATATGACAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCTCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAGACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTTAACAAGGATATCCAGGAATTGAACTCAGCTCTGCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTCTCAGCACCACATCGCACTTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTGTCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAATGAGAACAAAGACACAACATACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCTAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAGATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACGCAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCCCTGAATAGACCAATAACAGGCTCTGAAATTGAGGCAATAATTAATAGCCTACCAACCAAAAAAAGTCCAGGACCAGACGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCCTGATGAACATCGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACGCAAATCAATAAACGTAATCCAGCATATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACAGCCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATCTCAAAATAATAAGAGCTATTTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAAGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATTTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAACGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGACAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGACCAATGGAACAGAACAGAGCCCTCAGAAATAATACCACACATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAAAGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAACAGACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCATCAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTATCGCAAGGACAAAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTTGAACAATGAGAACACTTGGACACAGGAAGGGGAACATCACACACCGGGGCCTGTCGTGGGGTGGGGGGAGGGGGGAGGGATAGCATTAGGAGATATACCTAATGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAACCTGCACGTTGTGCACATGTACCCTAGAACTTAAAGTATAATAAAAAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA5.ORF1.hs4_gibbon.pars,L1PA5.ORF2.hs4_gibbon.pars,1027,2040,2107,5931,6150,219
L1PA6,CCGTTCCAAGATGGCCGAATAGGAACAGCTCTGGTCTGCAGCTCCCAGCGTGATCGACGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGGTACCTGGTTCATCTCATTGGGACTGGTTGGACAGTGGGTGCAGCCCATGGAGGGCGAGCCGAAGCAGGGCGGGGCGTCGCCTCACCCGGGAAGTGCAAGGGGTCGGGGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGACAGACTGTACCTGGAAAAACGGGACACTCCCGCCCAAATACTGCGCTTTTCCCATGGTCTTAGCAACCGGCAGACCAGGAGATTCTCTCCCGTGCCTGGCTCGGTGGGTCCCACGCCCACGGAGCCTTGCTCACTGCTAGCGCAGCAGTCTGAGATCGACCTGCGAGGCTGCAGCCTGGTGGGGGGAGGGGCGTCCGCCATTGCTGAGGCTTGAGTAGGTAAACAAAGCGGCCAGGAAGCTCGAACTGGGTGGAGCCCACCGCAGCTCAGCAAGGCCTACTGCCTCTATAGACTCCACCTCTGTGGGCAGGGCATAGCTGAACAAAAGGCAGCAGAAACTTCTGCAGACTTAAACGTCCCTGTCTGACAGCTCTGAAGAGAGCAGTGGTTCTCCCAGCATGGCGTTTGAGCTCTGAGAATGGACAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGTGTAGCCTAACTGGGAGACACCTCCCAGTAGGGGCCGACAGACACCTCATACAGGCGGGTGCCCCTCTGGGACGAAGCTTCCAGAGGAAGGATCAGGCAGCAATATTTGCTGTTCTGCAATATTTGCTGTTCTGCAGCCTCCGCTGGTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGACCTGACTGTTAGAAGGAAAACTAACAAACAGAAAGGAATAGCATCAACATCAACAAAAAGGACATCCACACCAAAACCCCATCTGTAGGTCACCAACATCAAAGACCAAAGGTAGATAAAACCACAAAGTGGGGAGAAACCAGAGCAGAAAAGCTGAAAATTCTAAAAACCAGAGCGCCTCTTCTCCTCCAAAGGATCGCAGCTCCTCGCCAGCAACGGAACAAAGCTGGACGGAGAATGACTTTGACGAGTTGACAGAAGTAGGCTTCAGAAGGTCGGTAATAACAAACTTCTCCGAGCTAAAGGAGCATGTTCTAACCCATCGCAAGGAAGCTAAAAACCTTGAAAAAAGGTTAGACGAATGGCTAACTAGAATAAACAGTGTAGAGAAGACCTTAAATGACCTGATGGAGCTGAAAACCATGGCACGAGAACTTCGTGACGCATGCACAAGCTTCAATAGCCGATTCGATCAAGTGGAAGAAAGGATATCAGTGATTGAAGATCAAATTAATGAAATAAAGCGAGAAGACAAGTTTAGAGAAAAAAGAGTAAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTTTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTTCAGGATATTATCCAGGAGAACTTCCCCAACCTAGCAAGGCAGGCCAACATTCAAATTCAGGAAATACAGAGAACACCACAAAGATACTCCTCGAGAAGAGCAACCCCAAGACACATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCTTACAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGGTAAAGACCATCGATGCTATGAAGAAACTGCATCAATTAACGGGCAAAATAACCAGCTAACATCATATGACAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAGACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAGGTTAACAAGGATATCCAGGACTTGAACTCAGCTCTGCACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTCTCAGCACCACATCGCACTTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCACTCCTCAGCAAATGTAAAAGAACAGAAATCACAACAAACTGTCTCTCAGACCACAGTGCAATCAAATTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCACAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTAAATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAATGAGAACAAAGACACAACGTACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGAGAAAGCAGGAAAGATCTAAAATCGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACAAATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAGATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACGCAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGAGGCAATAATTAATAGCCTACCAACCAAAAAAAGTCCAGGACCAGACGGATTCACAGCCGAATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAGCCTGGCAGAGACACAACAAAAAAAGAGAATTTTAGACCAATATCCCTGATGAACATCGATGCGAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCACGATCAAGTCGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACGCAAATCAATAAACGTAATCCATCACATAAACAGAACCAACGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTCGACAAAATTCAACAGCCCTTCATGCTAAAAACTCTCAATAAACTAGGTATTGATGGAACGTATCTCAAAATAATAAGAGCTATTTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATTGTATATTTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCCTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAACGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTATAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGACCAATGGAACAGAACAGAGGCCTCAGAAATAACACCACACATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGAAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAATGTTAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGACTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATAGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTACCCATCTGACAAAGGGCTAATATCCAGAATCTACAAAGAACTTAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAACAGACACATGAAAAAATGCTCATCATCACTGGTCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGATGCTGGAGAGGATGTGGAGAAATAGGAACGCTTTTACACTGTTGGTGGGAGTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTACTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCATCAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGCAGGGACATGGATGAAGCTGGAAACCATCATTCTGAGCAAACTATCACAAGGACAGAAAACCAAACACCGCATGTTCTCACTCATAGGTGGGAATTTGAACAATGAGAACACTTGGACACAGGGCGGGGAACATCACACACCGGGGCCTGTCGGGGGGTGGGGGGCTGGGGGAGGGATAGCATTAGGAGAAATACCTAATGTAAATGACGAGTTGATGGGTGCAGCAAACCAACATGGCACATGTATACCTATGTAACAAACCTGCACGTTGTGCACATGTACCCTAGAACTTAAAGTATAATAAAAAAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA6.ORF1.hs5_gmonkey.pars,L1PA6.ORF2.hs5_gmonkey.marg,1034,2056,2123,5968,6188,220
L1PA7,GGTGGCTGGCAAGATGGCCGAATAGGAACAGCTCCGGTCTGCAGCTCCCAGCGAGATCAACGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAGGTACCCGGCTCATCTCATTGGGACTGGTTAGACAGTGGGTGCAGCCCACGGAGGGCGAGCCGAAGCAGGGTGGGGCGTCGCCTCACCCGGGAAGCGCAAGGGGTCGGGGAACTCCCTCCCCTAGCCAAGGGAAGCCGTGAGGGACTGTGCCGTGAGGAACGGTGCATTCCGGCCCAGATACTACGCTTTTCCCACGGTCTTCGCAACCCGCAGACCAGGAGATTCCCTCGGGTGCCTACACCACCAGGGCCCTGGGTTTCAAGCACAAAACTGGGCGGCCGTTTGGGCAGACACCGAGCTAGCTGCAGGAGTTTTTTTTCATACCCCAGTGGCGCCTGGAACGCCAGCGAGACAGAACCGTTCACTCCCCTGGAAAGGGGGCTGAAGCCAGGGAGCCAAGTGGTCTAGCTCAGCGGATCCCACCCCCACGGAGCCCAGCAAGCTAAGATCCACTGGCTTGAAATTCTCGCTGCCAGCACAGCAGTCTGAAGTCGACCTGGGACGCTCGAGCTTGGTGGGGGGAGGGGCGTCCGCCATTACTGAGGCTTGAGTAGGCGGTTTTCCCCTCACAGTGTAAACAAAGCCGCCGGGAAGTTCGAACTGGGCGGAGCCCACCGCAGCTCGGCAAAGCCGCTGTAGCCAGACTGCCTCTCTAGATTCCTCCTCTCTGGGCAGGGCATCTCTGAAAGAAAGGCAGCAGCCCCAGTCAGGGGCTTATAGATAAAACTCCCATCTCCCTGGGACAGAGCACCTGGGGGAAGGGGCGGCTGTGGGCGCAGCTTCAGCAGACTTAAACGTTCCTGCCTGCCGGCTCTGAAGAGAGCAGCGGATCTCCCAGCACAGCGCTCGAGCTCTGCTAAGGGACAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGTGCCTCCTGACTGGGAGACACCTCCCAGCAGGGGTCGACAGACACCTCATACAGGAGAGCTCCGGCTGGCATCTGGCGGGTGCCCCTCTGGGACGAAGCTTCCAGAGGAAGGAACAGGCAGCAATCTTTGCTGTTCTGCAGCCTCCGCTGGTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAGCAGACCTGCAGCAGAGGGGCCTGACTGTTAGAAGGAAAACTAACAAACAGAAAGGAATAGCATCAACATCAACAAAAAGGACGTCCACACAAAAACCCCATCCGAAGGTCACCAACATCAAAGACCAAAGGTAGATAAATCCACGAAGTGAGGAAAAACCAGCGCAAAAAGGCTGAAAATTCCAAAAACCAGAACGCCTCTTCTCCTCCAAAGGATCACAACTCCTCGCCAGCAAGGGAACAAAACTGGACGGAGAATGAGTTTGACGAATTGACAGAAGTAGGCTTCAGAAGGTGGGTAATAACAAACTCCTCCGAGCTAAAGGAGCATGTTCTAACCCAATGCAAGGAAGCTAAGAACCTTGAAAAAAGGTTAGAGGAATTGCTAACTAGAATAACCAGTTTAGAGAAGAACATAAATGACCTGATGGAGCTGAAAAACACAGCACGAGAACTTCGTGAAGCATACACAAGTATCAATAGCCGAATCGATCAAGCGGAAGAAAGGATATCAGAGATTGAAGATCAACTTAATGAAATAAAGCGTGAAGACAAGATTAGAGAAAAAAGAATGAAAAGGAACGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAACCTACGTTTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACTCTTCAGGATATTATCCAGGAGAACTTCCCCAACCTAGCAAGACAGGCCAACATTCAAATTCAGGAAATACAGAGAACACCACAAAGATACTCCTCGAGAAGAGCAACCCCAAGACACATAATCGTCAGATTCACCAAGGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCTGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGCGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCTTACAAGAGCTCCTGAAGGAAGCACTAAATATGGAAAGGAAAAACCGGTACCAGCCACTGCAAAAACATACCAAATTGGTAAAGACCATCGACACTATGAAGAAACTGCATCAACTAACGGGCAAAATAACCAGCTAGCATCATATGACAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCGGTGTGCTGTATTCAGGAGACCCATCTCACGTGCAAAGACACACATAGGCTCAAAATAAAGGGATGGAGGAATATTTACCAAGCAAATGGAAAGCAAAAAAAAAAAAAAAAAAAAAAAGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGATCAATGCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAGTGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAATTAACAAGGATATTCAGGACTTGAACTCAGCTCTGGACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTCTCAGCACCACATCGCACTTATTCTAAAATTGACCACATAATTGGAAGTAAAACACTCCTCAGCAAATGCAAAAGAACGGAAATCATAACAAACAGTCTCTCAGACCACAGTGCAATCAAATTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCACAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTAAATAACGAAATTAAGGCAGAAATAAATAAGTTCTTTGAAACCAATGAGAACAAAGACACAACGTACCAGAATCTCTGGGACACAGCTAAAGCAGTGTTTAGAGGGAAATTTATAGCACTAAATGCCCACAGGAGAAAGCGGGAAAGATCTAAAATCGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACAAATTCAAAAGCTAGCAGAAGACAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAGATAGAGACACAAAAAACCCCCTTTAAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATTAACAAAATAGATAGACCGCTAGCCAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACTGATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTCGAATCCCTGAATAGACCAATAACAAGTTCTGAAATTGAGGCAGTAATTAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGACGGATTCACAGCCGAATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAAACAATAGAAAAAGAGGGACTCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGACACAACAAAAAAAGAAAATTTCAGGCCAATATCCCTGATGAACATCGATGCGAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCACGATCAAGTCGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACGCAAATCAATAAACGTAATCCATCACATAAACAGAACCAATGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTCGATAAAATTCAACACCCCTTCATGCTAAAAACTCTCAATAAACTAGGTATTGATGGAACGTATCTCAAAATAATAAGAGCTATTTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAGGGTATTCAAATAGGAAGAGAGGAAGTCAAATTGTCTCTGTTTGCAGATGACATGATTGTATATTTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCCTATACACCAATAATAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGGAATACAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAGAGAGGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAAGTAATTTATAGATTCAATGCTATCCCCATCAAGCTACCATTGACTTTCTTCACAGAATTAGAAAAAACTACTTTAAATTTCATATGGAACCAAAAAAGAGCCCGTATAGCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGATATATAGACCAATGGAACAGAACAGAGGCCTCAGAAATAACGCCACACATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGTTGGGAAAACTGGCTAGCCATATGCAGAAAACTGAAACTGGACCCCTTCCTTACACCTTATACAAAAATTAACTCAAGATGGATTAAAGACTTAAACGTAAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAAGACTTCATGACTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCTAATATCCAGAATCTACAAGGAACTTAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCGGCCAACAAACATATGAAAAAAAGCTCATCATCACTGGTCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACGCCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGATGCTGGAGAGGATGTGGAGAAATAGGAACGCTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATTCTACTATAAAGACACATGCACACGTATGTTTATTGCAGCACTGTTCACAATAGCAAAGACTTGGAACCAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGCAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTAACACAGGAACAGAAAACCAAACACCGCATGTTCTCACTCATAAGTGGGAGTTTGAACAATGAGAACACATGGACACAGGGAGGGGAACATCACACACCGGGGCCTGTCGGGGGGTGGGGGGCTAGGGGAGGGATAGCATTAGGAGAAATACCTAATGTAGATGACGGGTTGATGGGTGCAGCAAACCACCATGGCACGTGTATACCTATGTAACAAACCTGCACGTTCTGCACATGTATCCCAGAACTTAAAGTATAATAATAAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA7.ORF1.hs6_sqmonkey.pars,L1PA7.ORF2.hs6_sqmonkey.marg,1341,2363,2430,6272,6491,219
L1PA8,TGGCAAGATGGCCGAATAGGAACAGCTCCGGTCTGCAGCTCCCAGCGAGACCAATGCAGAAGGCGGGTGATTTCTGCATTTCCAACTGAGGTACCCAGTTCATCTCATTGGGACTGGTTAGGCAGTGGGTGCAGCCCACGGAGGGCGAGCAGAAGCAGGGTGGGGCGTCGCCTCACCCAGGAAGTGCAAGGAGCCGGGGGACTCCCTTCCCCAGCCAAGGGAAGCCGTGAGGGACTGTGCTATCCGGCCTAGGTACTACGCTTTTCCCACGGTTTTTGCAATCCGCAGATCAGGAGATTCCCTCGTGTGCCTACACCACCAGGGCCCTGGGTTTCAAGCACAAAACTGGGCGGCTGTTTGGGCAGACACCGAGCTAGCTGGGGGATTTTTTTTTTTTTTTCGTACCCCAGTGGCGCCTGGAACCCCAGCGAGACAGAACCGTTCACTCCCCTGGAAAGGGGGCTGAAGCCAGGGAGCCAAGTGGTCTCGCTCAGCGGGTCCCACTCCCACGGAGCCCAGCAAGCTAAGAACCACTGGCTTGAAATTCTCGCTGCCAGCACAGCAGTCTGAAGTCGACCTGGGACGATCGAGCTTGGTGGGGGGAGGGGCGTCCGCCATTACTGAGGCTTGAGTAGGCGGTTTTCCCCTGACAGTGCTAAGGAGGCTGGGAGGTTTGGACTGGGCGGAACTCACCACAGCGTGGCAAAGCGGCTGTGGCCAGACTGCCTCTCTAGATTCCTCCTCACTGGGCAGGGCATCTCTGAAAGAAAGGCAGCAGCCCCAGTCAGGGGCTTATAGATAAAACTCCCATCTCCCTGGGACAGAGCACCTGGGGGAAGGGGCGGCTGTGGGCGCAGCTTCAGCGGACTTAAACGTTCCTGCCTGCCGGCTCTGAAGAGAGCAGCGGATCCTGACAAGGAGGATTCTCCCAGCACAGCGCTCGAGCTCTGCTAAGGGACAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGTGCCTCCTGACTGGGAGAGACCTCCCAACAGGGGTCGACAGACACCTCATACAGGAGAGCTCCGGCTGGCATCAGGCCGGTGCCCCTCTGGGACGAAGCTTCCAGAGGAAGGAGCAGGCAGCAATCTTTGCTGTTCTGCAGCCTCCGCTGGTGATACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTGCAGCAGACCTGCAGAAGAGGGGCCTGACTGTTAGAAGAAAAACTAACAAACAGAAAGCAATAACATCAACATCAACAAAAAGGACCCCCACACAAAAACCCCATCCAAAGGTCATCAGCCTCAAAGATCAAAGGTAGATAAATCCACGAAGTGAGGAAAAACCAGCGCAAAAATGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAATGATCGCAACTCCTCTCCAGCAAGGGCACAAAACTGGATGGAGAATGAGTTTGACGAATTGACAGAAGTAGGCTTCAGAAGGTGGGTAATAACAAACTCCTCTGAGCTAAAGGAGCATGTTCTAACCCAATGCAAGGAAGCTAAGAACCTTGATAAAAGGTTACAGGAACTGCTAACTAGAATAACCAGTTTAGAGAAGAACATAAATGACCTGATGGAGCTGAAAAACACAGCACGAGAACTTCGTGAAGCATACACAAGTATCAATAGCCGAATCGATCAAGCGGAAGAAAGGATATCAGAGATTGAAGATCAACTTAATGAAATAAAGCGTGAAGACAAGATTAGAGAAAAAAGAATGAAAAGGAACGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAACCTACGATTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAAGTTGGAAAACACACTTCAGGATATTATCCAGGAGAACTTCCCCAACCTAGCAAGACAGGCCAACATTCAAATTCAGGAAATACAGAGAACACCACTAAGATACTCCTCAAGAAGAGCAACCCCAAGACACATAATCGTCAGATTCTCCAAGGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCAGGTTACCTACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCTGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGCGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGGGATTTTGTCACCACCAGGCCTGCCTTACAAGAGCTCCTGAAGGAAGCACTAAATATGGAAAGGAAAAACCGGTACCAGCCACTGCAAAAACATACCAAAATAATAAAGACCAATGACACTATGAAGAAACTGCATCAACTAATGTGCAAAATAACCAGCTAGCATCATGTGACAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGGATAAAGAGTCAAGACCCATCGGTGTGCTGTATTCAGGAGACCCATCTCACGTGCAAAGACACACATAGGCTCAAAATAAAGGGATGGAGGAATATTTACCAAGCAAATGGAAAGCAAAAAAAAAAAGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGATCAATGCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAACAAGTTCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAGTGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAATTAACAAGGATATTCAGGACTTGAACTCAGCTCTGGACCAAGCGGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTCTCAGCACCACATAGCACTTATTCTAAAATCGACCACATAATTGGAAGTAAAACACTCCTCAGCAAATGCAAAAGAACGGAAATCATAACAAACAGTCTCTCAGACCACAGTGCAATCAAATTAGAACTCAGGATTAAGAAACTCACTCAAAACCGCACAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTAAATAACGAAATTAAGGCAGAAATAAAGAAGTTCTTTGAAACCAATGAGAACAAAGACACAACGTACCAGAATCTCTGGGACACAGCTAAAGCAGTGTTAAGAGGGAAATTTATAGCACTAAATGCCCACATCAGAAAGCGGGAAAGATCTAAAATCGACACCCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACAAATTCAAAAGCTAGCAGAAGACAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAGATAGAGACACGAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAGATTAACAAAATAGATAGACCGCTAGCCAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACTGATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTCGAATCCCTGAATAGACCAATAACAAGTTCTGAAATTGAGGCAGTAATTAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGACGGATTCACAGCCGAATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAAACAATAGAAAAAGAGGGACTCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGACACAACAAAAAAAGAAAATTTCAGGCCAATATCCCTGATGAACATCGATGCGAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCACGATCAAGTCGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATATGCAAATCAATAAACGTAATCCATCACATAAACAGAACCAATGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTCGATAAAATTCAACACCCCTTCATGCTAAAAACTCTCAATAAACTAGGTATTGATGGAACATATCTCAAAATAATAAGAGCTATTTATGACAAACCCATAGCCAATATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAGGGTATTCAAATAGGAAGAGAGGAAGTCAAATTGTCTCTGTTTGCAGATGACATGATTGTATATTTAGAAAACCCCATCGTCTCAGCCCAAAAACTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCCTATACACCAATAATAGACAAGCAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGGAATACAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAGAGAGGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAAGTAATTTATAGATTCAATGCTATTCCCATCAAGCTACCATTGACTTTCTTCACAGAATTAGAAAAAACTACTTTAAATTTCATATGGAACCAAAAAAGAGCCCGTATAGCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGATATATAGACCAATGGAACAGAACAGAGGCCTCAGAAATAACACCACACATCTACAACCATCTGATCTTCGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGCAGAAAACTGAAACTGGACCCCTTCCTTACACCTTATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAAGACTTCATGACTAAAACACCAAAAGCAATTGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTATCCATCTGACAAAGGTCTAATATCCAGAATCTACAAGGAACTTAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGCGGCCAACAAACATATGAAAAAAAGCTCATCATCACTGGTCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACGCCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGATGCTGGAGAGGATGTGGAGAAATAGGAACGCTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATTCTACTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTTACAATAGCAAAGACTTGGAACCAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGTTCATGTCCTTTGCAGGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAACTAACACAGGAACAGAAAACCAAACACCGCATGTTCTCACTCATAAGTGGGAGTTTGAACAATGAGAACACATGGACACAGGGAGGGGAACATCACACACCGGGGCCTGTCGGGGGGTGGGGGGCAAGGGGAGGGAGAGCATTAGGACAAATACCTAATGCATGCGGGGCTTAAAACCTAGATGACGGGTTGATAGGTGCAGCAAACCACCATGGCACATGTATACCTATGTAACAAACCTGCACGTTCTGCACATGTATCCCAGAACTTAAAGTAAAATAAAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA8.ORF1.hs6_sqmonkey.marg,L1PA8.ORF2.hs6_sqmonkey.marg,1339,2361,2428,6255,6490,235
L1PA8A,GGGGCGGGGCCAAGATGGCCGACTAGAAGCAGCGGCGTTCGGAGGCTCCCATCGAAAAAAAACATAATAAGCGTGTGAATCCTTCACCGGCAACCAAGGTATCCAGGTTCTCTCATCAAAATTGACTAGAAGGCTGGCGTGACCCACGGAGAGAAGGAAGAGCAGTGTGGTGCGGTGGCCCACCTGAGAGCCACACGGGGAAGGGGAACCCCCTCCCCCCAGCCAAGGGAGGCGGTGAGTGAGCGTGCTACCCAGCCGGGGAAACTGTGCTTTTTCCACGGAACTGTGCAACCCACGGATCGGAAGATCCCACTCGCGAACCCACGCCACCGGGGCCTAGCGTCCCAACCCCGGAACGCGCAGATTCTTACAGCCTCTCAGCTGGAATCTGCTTAAGCCTACCGAACTCCCGGGGGGAGGGGCGACCAGCACCAGCTGCGGCTGCCTGCTGTCTAAGCCATTTGAGCTCCTTGGGGGAGGGGCAGCAGCCAGCACTGGGACTCGCAACTGCCTAACACGCTAAGCTCCCTGGGCGGGGGAAGGGCGGCACCCATTTCTATAGCTCCAGGCTGTGCTTTTCCCCTGCTGGAGCCAGGGAGGCTGGACGGCTTGGTCCCAAGACTTGTCCCCACAGCCCAACACACCGGCTGTGGCAGTCTGCGGCCAGAGTGCCTCTTCAGGCCTAACCCTGACCCATCCTTCCTCAGTGGGCGGGGCTTCCCTGCAGGATCTCCAATAACTCCAGCCAGAGGCTCAGGGACAGAATTCGGATCTCCCTGGGCCTGAGCCCCTAGGGGGAGGGGTGGCCGCAGTCTCTGTGGACCAGCAGACTTAGCCTCTCCTCCTGGTAGTTCTGAGGAATCCGGGCAGCCCAGACGAGTGGGTTTCCCCCCAGCGAAACACACCCTCTCCACCAAGGGACAAAGTGCTTCGTTAAATGGGTCCTGCTCCCCGTGCCACCCAACTGGGTGAGACCCTCCAACAGGGGTTGTCAGACACCCTATACAGGAGCGATCCTACTGGCATCAGGTTGGTGCCCCTCGAGGTCAGAGGTCCCAGAAGAAGGAGCAGGCACCCATCTTTGCTGCTCTCCAGCCTCCTTGAGTGACATCTCCAGGCACGGGAGCGAATCAGATGAATAGGGCCTGAAGTGAACCCCCAGCAAACTGCAGCAGCCCTACAGAAGAGGGACCTGACTATTGAAAGAAAAACAAACAAGCAGAAAGTGACAACAACAGCATCAACAACAACAACAACAACAACAAAAAGGCCCCCACAAAAACCCCATCCAAGGGTCAGCAGCCTCAAAGACCGAAACTAGACAAACTCACGAAGACCCAAAAGGCCAGAGTGCCTCTTCTCCTCCAAATGATCGCAACGTCTCTCCATCAAGGGCGCAGAACTGGACGGAGGATCAGATGGACGAATTGACAGAAGTAGGCTTCAGAAGATGGGTAATAAAAAACTACGATGAGCTAAAGGAGCATGTTCTAACCCAATGCAAAGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAATAACCAGTTTAGAGAGGAACATAAACGACCTGATGGAGCTGAAAAACACAGCACGAGAACTTCGTGAAGCATACACAAGTATCAACAGCCGAATCGACCAAGCAGAAGAAAGGATATCAGAGTTTGAAGACCACCTTACTGAAATAAGACATGCAGACAAGAATAGAGAAAAAAGAATGAAAAGGAATGAACAAAGCCTCCAAGAAATATGGGACTTCATAAAAAGACCGAACCTACGATTGATTGGAGTACCAGAAGGAGATGGGGAGAATGGAAACAAGCTGGAAAACACACTTCAGGATATTATCCAGGAGAACTTCCCCAACCTAGCAAGACAGGCCAACATGCAAATTCAGGAAATACAGAGAACACCATTAAGATACTCCACGAGAAGATCAACCCCAAGACACATAATCATCAGATTCTCCAAGGTCGAAATGAAGGAAAAACTGTTAAGGGCAGCCAGAGAGAAAGGCCAGGTCACCTACAAAGGGAAGCCCATCAGACTAACAGCAGACCTCTCAGCAGAAACTCTACAAGCCAGAAGAGATTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGCGAAGGAGAAATAAAATCCTTTCCAGACAAGCAAATGCTGAGGGATTTCGTTACCACCAGGCCTGCCCTGCAAGAGCTCCTGAAAGAAGCACTAAATATGGAAAGGAAAAACCGGTACCAGCCACTGCAAAAACACACCAAAATAATAAAGACCAATGACACTATGAAGAAACTGCATCAACTAGTGTGCAAAATAACCAAATAGCATCATGTGACAGGATCAAATTCACACATAACAATACTAACCTTAAATGTAAATGGGCTAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGGATAAGGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAGACCCATCTTACATGCAAAGACACACACAGGCTCAAAATAAAGGGATGGAGGAAAATTTACCAAGCAAATGGAAAGCAAAAAAAAAAAAAAAAAAAAAAAACAGGGGTTGCAATCCTAGTCTCTGACAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGAACAATTCAACAAGAAGAGCTAACTATTCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAACAAGTTCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAGTGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAATTAACAAGGATATTCAGGACTTGAACTCAGCTCTGGATCAAGTGGACCTAGTAGACGTCTACAGAACTCTCTACCCCAAATCAACAGAATATACATTCTTCTCAGTGCCACATGGCACTTATTCTAAAATCGACCACATAATTGGAAGTAAAACACTCCTCAGCAAATGCAAAAGAACTGAAATCATAACAAACAGTCTCTCAGACCACAGTGCAATCAAATTAGAACTCAGGATTAAGAAACTCACTCAAAACCACACAATTTCATGGAAATTGAACAACCTGCTCCTGAATGACTCCTGGGTAAATAATGAAATTAAGGCAGAAATCAAGAAGTTCTTTGAAACCAATGAGAACAAAGAGACAACGTACCAGAATCTCTGGGACACAGCTAAAGCAGTGTTAAGAGGGAAATTTATAGCACTAAATGCCCACATCAGAAAGCTAGAAAGATCTCAAATCGACACCCTAACATCACAATTAAAAGAGCTAGAGAGGCAAGAGCAAACTAATCCAAAAGCTAGCAGAAGACAAGAAATAACTAAGATCAGAGAAGAATTGAAGGAGATAGAGACACGAAAAACCCTCCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAAATTAACAAAATAGATAGACCGCTAGCTAGACTAATAAAGAAGAAGAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACTGACCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCCCTGAATAGACCAATAACAAGCTCTGAAATTGAGGCAGTAATTAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGACGGATTCACAGCTGAATTCTACCAGAAATACAAAGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAAACAATTGAAAAGGAGGGACTCCTCCCTAACTCATTTTATGAAGCCAGCATCATCCTGATACCAAAACCAGGAAGAGACACAACAAAAAAAGAAAACTTCAGGCCAATATCCCTGATGAACATCGATGCGAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAACTTATCCACCACGATCAAGTCGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACGCAAATCAATAAACGTAATCCATCACATAAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGATAAAATTCAACATCCCTTCATGTTAAAAACTCTCAATAAACTAGGTATTGATGGAACATATCTCAAAATAATAAGAGCTATTTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCTTTGAAAACTGGTACAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAGGGTATTCAAATAGGAAGAGAGGAAGTCAAGTTGTCTCTGTTTGCAGATGACATGATTTTATATTTAGAAAACCCCATCATCTCAGCCCAAAAACTCCTTGAACTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCCTTTACACCAACAATAGGCAAGCAGAGAGCCAAATCATGAATGAACTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGGAATACAGCTAACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAGAGAGGACACAAACAAATGGAAAAACATTCCATCCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAAGTAATTTATAGATTCAATGCTATTCCCATCAAACTACCATTGACATTCTTCACAGAATTAGAAAAAACTATTTTAAATTTCATATGGAATCAAAGAAGACCCCGTATAGCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCATGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGACATATAGACCAATGGAGCAGAACAGAGACCTCAGAAATAACACCACACATCTACAACCATCTGATCTTCAACAAACCTGACAAAAACAAGCAATGGGGAAAGGATCTCCTATTCAGTAAATGGTGCTGGGAAAACTGGCTAGCCATATGCAGAAAACTGAAACTGGACCCCTTCCTTACACCTTATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAAACCCAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAAGACTTCATGACAAAAACGCCAAAAGCAATTGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAATTTTTGCAATCTACCCATCTGACAAAGGTCTAATATCCAGAATTTACAAGGAACTTAAACATATTTACAAGAAAAAAAACAACCCCATCAAAAAGTGGGCAAAGGATATGAACAGACACTTCTCAAAAGAAGACATTTATGTGGCCAACAAACATATGAAAAAAAGCTCAACATCACTGATCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACGCCAGTCAGAATGGCGATTATTAAAAAGTCAGGAAACAATAGATGCTGGCGAGGCTGTGGAGAAATAGGAACGCTTTTACACTGTTGGTGGGAATGTAAATTAGTTCAACCATTGTGGAAGACAGTATGGCGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGAATATAAATCATTCTACTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTTACAATAGCAAAGACATGGAACCAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAGGAATGAGATCATGTCCTTTGCAGGGACATGGATGAAGCTGGAAGCCATCATCCTCAGCAAACTAACACAGGAACAGAAAACCAAACACCGCATGTTCTCACTCATAAGTGGGAGTTTGAACATTGAGAACACATGGACACAGAGAGGGGAACAACACACACCAGGGCCTGTTGGGGGGTGGGGGGTGAGGGGAGGGAACTTAGAGGATGGGTCAATAGGTGCAGCAAACCACCATGGCACACGTATACCTATGTAACAAACCTGCACGTTCTGCACATGTATCCCGCTTTTTTTGTTTTTTTTTTTTTTTTTTTAGAAGAAATAAAGAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA8A.ORF1.hs6_sqmonkey.marg,L1PA8A.ORF2.hs6_sqmonkey.marg,1335,2327,2394,6230,6447,217
L1PB1,ATCATGGCGGATGGGAGGCAGGACTAGATTGCAGCTCCGGACAGAGCAGCATGCGGAGGCTCGCATTGTGAATTTTAGCTCCAGATCGACTGCAAGAACAAACCAGCAATCCCGAGAGGACCCACAGACCCTCTGAAGGAAGCGGACTGCTCCTGCAGGACCCGGGAGACACCCCAAATACTGTGAGTGCCCCAACTGCGGAAGTGGGAAAGGGAGACCCTCCTCTCCCGAACACACACCCCCACTGGAGAAGCTGAAGGTCTTTTGCAGGAGAAGTTTCCGACTTTACCTGGAGCTGAGTCAATTTAGAGAGCCGAGCGAAATACAGGGGTAGAGGAAGCAGCAGAAAGGCCCTGGGAGCTCGCTGGGTCCCCAAGCAGGCCATTCCTGCCTGGCACCACAGGGATCCATCGGGAGGGTGGCCAGAGGAGCAGGGGGTAAAACTCCACAGGGAGAAGGAAATCTCTAGCTGAACTTTGTAACAATTTGAACGGGGTGAGAAGCCTCCTGGCCAGAACTCGGGGAGGGTGCAAATCCGGTGTGCAGACTCCACAGGCAGGGGAAGAACCAAGCCCTTTTCTTTCGCAGCTGGGAGGCGGGTAGCCTGGGGCAAGTTTTCAAGCCCGTCTCGCCCTCCGCCTGGAAACAGACTCGGGGCTGTTGGGGGGGGCACGGTGGGAGTGAGACCGGCCCTTCGGTTTGCGTGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCCACTTCCCTGACAACCTGCATGACTCAGCAGAGGCAGCCATAATCCTCCTAGGTACACAACTCCAGTGACCTGGGAATCTCACCCCCATCCCCCACAGCAGCCGCAGCAAGACCCGCCCAAGGAGAGTCTGAGCTCAGACATGCCTAGCCCTGCCCCCACCTGATGGTCCTTCCCTACCCACCCTGGTAGCAGAAGACAAAGGGCATATAATCTTGGGAGTTCTAGGGCCCCGCCCACCGCCGGTCCCTCTCCATACTACCACAGCTGATGCTCTCTGGAAAGCGCCACCTCCTGGCAGGAGGCCAACCAGCACAAAAATAGAGCATTAAACCACCAAAGCTAAGAACCCTCATGGAGTCCATTGCACCCCCCTGCCACCTCCACCGGAACAGGCGCTGGTATCCACGGCTGAGAGACCCATAGACGGTTCACATCACAGGACTCTGTGCAGACAACCCCCAGTACCAGCCCGGAGCTGGGTAGACTCGCTGGGTGGCTAGACCCAGAAGAGAGACAACAATCACTGCAGTTTGGCTCACAGGAAGCCACATCCATAGGAAAAGGGGGAGAGTACTACATCAAGGGAACACCCCGTGGGACAAAAGAATCTGAACAACAGCCTTCAGCCCTAGACCTTCCCTCTGACAGAGCCTACCCAATGAGAAGGAACCAGAAAACCAACCCTGGTAATATGACAAAACAAGGCTCTTCAACACCCCCCAAAAATCACACTAGTTCACCAGCAATGGATCCAAACCAAGAAGAAATCCCTGATTTACCTGAAAAAGAATTCAGGAGGTTAGTTATTAAGCTAATCAGGGAGGGACCAGAGAAAGGCGAAGCCCAATGCAAGGAAATCCAAAAAATGATACAAGAAGTGAAGGGAGAAATATTCAAGGAAATAGATAGCTTAAAGAAAAAACAATCAAAAATTCAGGAAACTTTGGACACACTTTTAGAAATGCGAAATGCTCTGGAAAGTCTCAGCAATAGAATTGAACAAGTAGAAGAAAGAAATTCAGAGCTCAAAGACAAGGTCTTCGAATTAACCCAATCCAACAAAGACAAAGAAAAAAGAATAAGAAAATATGAACAAAGCCTCCAAGAAGTCTGGGATTATGTTAAACGACCAAACCTAAGAATAATCGGTGTTCCTGAGGAAGAAGAGAATTCTAAAAGCTTGGAAAACATATTTGGGGGAATAATCGAGGAAAACTTCCCCGGCCTTGCTAGAGACCTAGACATCCAAATACAAGAAGCACAAAGAACACCTGGGAAATTCATCGCAAAAAGATCTTCGCCTAGGCACATTGTCATCAGGTTATCCAAAGTTAAGACGAAGGAAAGAATCTTAAGAGCTGTGAGACAGAAGCACCAGGTAACCTATAAAGGAAAACCTATCAGATTAACAGCAGATTTCTCAGCAGAAACCCTACAAGCTAGAAGGGATTGGGGCCCTATCTTCAGCCTCCTCAAACAAAACAATTATCAGCCAAGAATTTTGTATCCAGCGAAACTAAGCATCATATATGAAGGAAAGATACAGTCTTTTTCAGACAAACAAATGCTGAGAGAATTCGCCATTACCAAGCCACCACTACAAGAACTGCTAAAAGGAGCTCTAAATCTTGAAACAAATTCCTGGAAACACATCAAAACAGAACCTCTTTAAAGCATAAATCACACAGGACCTATAAAACAAAAATACAAGTTAAAAAGCAAAAACAAAAAACAAAAAAACCAAAGTACACAGGCAACAAAGAGCATGATGAATGCAATGGTACCTACATTTCAATACTAACATTGAATGTAAATGGCCTAAATGCTCCACTTAAAAGATACAGAACTGCAGAATGGATAAGAACTCACCAACCAACTATCTGCTGCCTTCAGGAGACTCACCTAACACATAAGGACTCACATAAACTTAAAGTAAAGGGGTGGAAAAAGGCATTTCATGCAAATGGACACCAAAAGCGAGCAGGGGTAGCTATTCTTATATCAGACAAAACAAACTTTAAAGCAACAGCAGTTAAAAGAGACAAAGAGGGACATTATATAATGGTAAAAGGCCTTGTCCAACAGGAAAATATCACAATCCTAAACATATATGCACCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTAATAGACCTAAGAAATGAGATAGACAGCAACACAATAATAGTGGGGGACTTCAATACTCCACTGACAGCACTAGACAGGTCATCAAGACAGAAAGTCAACAAAGAAACAATGGATTTAAACTATACCTTGGAACAAATGGACTTAACAGATATATACAGAACATTTCATCCAACAACCACAGAATACACATTCTATTCAACAGCGCATGGAACTTTCTCCAAGATAGACCATATGATAGGCCATAAAATGAGCCTCAATAAATTTAAGAAAATTGAAATTATATCAAGCACTCTCTCAGACCACAGTGGAATAAAACTGGAAATCAACTCCAAAAGGAACCTTCAAAACCATGCAAATACATGGAAATTAAATAACCTGCTCCTGAATGAGCATTGGGTCAAAAACGAAATCAAGATGGAAATTAAAAAATTCTTTGAACTGAATGACAATAATGACACAACCTATCAAAACCTCTGGGATACAGCAAAGGCGGTGCTAAGAGGAAAGTTCATAGCCCTAAATGCCTACATCAAAAAGACTGAAAGAGCACAAACTGACAATCTAAGGTCACACCTCAAGGAACTAGAGAAACAAGAACAAACCAAACCCAAACCCAGCAGAAGAAAGGAAATAACCAAGATCAGAGCAGAACTAAATGAAATTGAAACAAACAAAAAAAAAATACAAAAGATAAATGAAACAAAAAGCTGGTTCTTTGAAAAGATAAATAAAATTGATAGACCATTAGCAAGATTAACCAAGAAAAGAAGAGAGAAAATCCAAATAACCTCACTAAGAAATGAAACAGGAGATATTACAACTGACACCACTGAAATACAAAAGATCATTCAAGGCTACTATGAACACCTTTACGCACATAAACTAGAAAACCTAGAAGAGATGGATAAATTCCTGGAAAAATACAACCCTCCTAGCTTAAATCAGGAAGAATTAGATACCCTGAACAGACCAATAACAAGCAGCGAGATTGAAATGGTAATTTAAAATTACCAACAAAAAAAAGTCCAGGACCAGATGGATTCACAGCAGAATTCTACCAGACATTCAAAGAAGAATTGGTACCAATCCTTTTGACACTATTCCACAAGATAGAGAAAGAAGGAACCCTCCCTAATTCATTCTATGAAGCCAGCATCACCCTAATACCAAAACCAGGAAAGGACATAACCAAAAAAGAAAACTACAGACCGATATCCTTGATGAACATAGATGCTAAAATCCTTAACAAAATACTAGCTAACCGAATCCAACAACATATCAAAAAGATAATCCACCATGATCAAGTGGGTTTCATACCAGGGATGCAGGGATGGTTTAACATACGCAAGTCAATAAATGTGATACACCACATAAACAGAATTAAAAACAAAAATCACATGATCATCTCAATAGATGCAGAAAAAGCATTCGACAAAATCCAGCATCCCTTTATGATTAAAACTCTCAGCAAAATCGGCATACAAGGGACATACCTTAATGTAATAAAAGCCATCTATGACAAACCCACAGCCAACATAATACTGAATGGGGAAAAGTTGAAAGCATTCCCTCTGAGAACTGGAACAAGACAAGGATGCCCACTCTCACCACTCCTCTTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCCAAATCGGTAAAGAGGAAGTCAAACTGTCACTGTTTGCTGATGATATGATCGTTTACCTTGAAAACCCTAAGGACTCCTCCAGAAAGCTCCTAGAACTGATAAAAGAATTCAGCAAAGTTTCCGGATACAAGATTAATGTACACAAATCAGTAGCTCTTCTATACACCAACAGCGACCAAGCAGAGAATCAAATCAAGAACTCAACCCCTTTTACAATAGCTGCAAAAAAAATAAAATACTTAGGAATATACCTAACCAAGGAGTCGAAAGACCTCTACAAGGAAAACTACAAAACACTGCTGAAAGAAATCATAGATGACACAAACAAATGGAAACACATCCCATGCTCATGGATGGGTAGAATCAATATTGTGAAAATGACCATACTGCCAAAAGCAATCTACAAATTCAATGCAATCCCCATCAAAATACCACCATCATTCTTCACAGAATTAGAAAAAACAATTCTAAAATTCATATGGAACCAAAAAAGAGCCCGCATAGCCAAAGCAAGACTAAGCAAAAAGAACAAATCTGGAGGCATCACACTACCTGATTTCAAACTATACTATAAGGCCATAGTCACCAAAACAGCATGGTACTGGTATAAAAATAGGCACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAACCCAAATACTTACAGCCAACTGATCTTCGACAAAGCAAACAAAAACATAAAGTGGGGAAAGGACACCCTTTTCAACAAATGGTGCTGGGATAATTGGCTAGCCACATGTAGGAGAATGAAACTGGATCCTCATCTCTCACCTTATACAAAAATCAACTCAAGATGGATTAAGGACTTAAACCTAAGACCTGAAACTATAAAAATTCTAGAAGATAACATTGGAAAAACCCTTCTAGACATTGGCTTAGGCAAGGATTTCATGACCAAGAACCCAAAAGCAAATGCAATAAAAACAAAGATAAATAGCTGGGACCTAATTAAACTAAAGAGCTTTTGCACGGCAAAAGGAACAGTCAGCAGAGTAAACAGACAACCCACAGAGTGGGAGAAAATCTTCACAATCTATACATCTGACAAAGGACTAATATCCAGAATCTACAACGAACTCAAACAAATCAGTAAGAAAAAAACAAACAATCCCATCAAAAAGTGGGCTAAGGACATGAATAGACAATTCTCAAAAGAAGATATACAAATGGCCAACAAACATATGAAAAAATGCTCAACATCACTAATGATCAGGGAAATGCAAATCAAAACCACAATGCGATACCACCTTACTCCTGCAAGAATGGCCATAATCAAAAAATCAAAAAACAGTAGATGTTGGCGTGGATGCGGTGAACAGGGAACACTTCTACACTGCTGGTGGGAATGTAAACTAGTACAGCCACTATGGAAAACAGTGTGGAGATTCCTTAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCTACCCAGAGGAAAAGAAGTCATTATTCGAAAAAGATACTTGCACACGCATGTTTATAGCAGCACAATTCACAATTGCAAAATCGTGGAACCAACCCAAATGCCCATCAATCAACGAGTGGATAAAGAAACTGTGGTATATATATATGATGGAATACTACTCAGCCATAAAAAGGAATGAATTAACAGCATTTGCAGTGACCTGGATGAGATTGGAGACTATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAACATCGTATGTTCTCACTGATATGTGGGAGCCTAAGCTATGAGGACGCAAAGGCATAAGAATGATACAATGGACTTTGGGGACTTGGGGGGAAGAGTGGGAGGGGGGCGAGGGATAAAAGACTACAAATATGGTGCAGTGTATACTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAAGAACTTACTCATGTAACCAAATACCACCTGTACCCCAATAACTTATGGAAAAATAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PB1.ORF1.hs6_sqmonkey.marg,L1PB1.ORF2.hs1_chimp.marg,1402,2382,2529,6337,6552,215
L1PA10,GGGAGGGGCCAAGATGGCCGACTAGAAACAGCTGCAGTCGGAGGCTCCCACCGAGAAGAACGAAAACGGCGAGTGAATCCTGCACCGGCAACTGAGGTATCCAGGTTCTCTCACTGGGACTGACTAGGCGGTTGGCGCGACCCACGGAGAGCGAGGAAAAGCAGGGTGGAGCGACGGCCCACCTGGGAGCCACACGGGGCAAGGGGAGCTCCCACCCCCAGCCAAGGGAGGCAGTGAGTGATTGTGCTACCCTGCCCGGGAAACCACGCTTTTTCCATGGATCTGTGCAACCCGCGGATCAGGAGATCCCCCTCGTGAGCCCACGCCACCAGGGCCTTGGGTCCCAAGCACAGAGCTGTGCAGATTCTCAGCGGCCACTCGGCTGGAGACTGCCTAAGACTACCGAGTTCCCGGGGGGAGGGGCGGCCATCATCACTGTGGCTGCCTGCTGCCTAAGATGACTGAGTTCCTGGGGGGAGGGGTGGCAGCCATCACTGCAGCTCCAGTCTGCTGTTTTTCCCCTGCCGGTGCTGGGGAGACTGGGTGGTTTGGACCAGGAGGAATTCCCCACAGTGCAGCACAGCGGCTGTGGCAGATCGTGGCCAGACTGCCTCTTTAGGCTGGACCCTGACCCATCCCTCCTCACTGGGCGGGGCCTCCCTGCAGGAATTTCAGCAACTCCAGCCAGGGGTTTAGGGACAGAACTCTGATCTCCCTGGGACTGAGCCCCTGGGGGGAGGGGTGGCCGCGGTCTCCACGGATCAGCAGACTTAGTCTTTCCCCCTGCTGGCTCTGAGGAATCCGGGCAGTCCAGATGAGTGGGATTCCCCCCAGCGCAGCGCACCCCCTCTGCCAAGGGGCAGCCAGAGTGCTTCGTTAAGCGGGTCCCTGATCCCGTGCCTCCTGACTGGGTGAGACCCCCCAACAGGGGTCGCCAGACACCTTATACAGGAGCATTCCCGCTGGCATCAGGTCGGTGCCCCTCTGGGACGGAGCTCCCAGAGGAAGGAGCAGGCAGCCATCTTTGCTGTTCTGCAGCCTCCACTGGTGACACCTCCAGGTGCGGGAGGGACCCAGGCGAATAGGGTCTGGAGTGGACCCCCAGCAAACCGCAGCAGCCCTACGGAAGAGGGGCCTGACTGTTAAAAGAAAAACAAACAAACAGAAAGCAACAACAACAGCATCAACAAAAAAGGCCCCCCAAAAACCCCATCCAAAGGTCAGCAGCCTCAAAGATCAAAGCTAGATAAACTCATGAAGTGAGAAAAAATCAATGCAAAAATGCTGAAAACTCAAAAAGCCAGAGTGCCTCTTCTCCTCCAAATGATTGCAACACCTCTCCAGCAAGGGCACAGAACTGGGCTGAGGCTGAGATGGATGAATTGACAGAAGTAGGCTTCAGAAGGTGGGTAATAATGAACTTCGCTGAGCTAAAGGAGCATGTTCTAACCCAATGCAAAGAAGCTAAGAACCATGATAAAACATTACAGGAGCTGTTAACCAGAATAACCAGTTTAGAGAGGAACATAAATGACCTGATGGAGCTGAAAAACACAACACGAGAACTTCACAATGCAACCACAAGTATCAATAGCCAAATAGACCAAGCAGAGGAAAGAATTTCAGAGCTTGAAGACTATCTTGCTGAAATAAGACAGGCAGACAAGATTAGAGAAAAAAGAATGAAAAGGAATGAACAAAACCTCCAAGAACTATGGGATTATGTAAAAAGACCAAACCTACGACTGATTGGGGTACCTGAAAGAGACGGGGAGAATGGAACCAAGTTGGAAAACATACTTCAGGATATCATCCAGGAGAACTTCCCCAACCTAGCAAGACAGGCCAACATTCAAATTCAGGAAATCCAGAGAACCCCAGTAAGATACTCCATGAGAAGATCAACCCCAAGACACATAATCATCAGATTCTCCAAGGTCGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGCCAGGTCACCTACAAAGGGAAGCCCATCAGACTAACAGCGGACCTCTCAGCAGAAACCCTACAAGCCAGAAGAGATTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTCCAACCCAGAATTTCATATCCGGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTTCAGACAAGCAAATGCTGAGGGAATTTGTCACCACCAGGCCTGCCTTGCAAGAGCTCCTGAAGGAAGCACTAAATATGGAAAGGAAAAACCATTACCAGCCACTACAAAAACACACTGAAGTAACAAAGACCAATGACACTATGAAGCAACTACATCAACAAGTCTGCAAAATAACCAGCTAGCATCATGTGACAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCCCCAATTAAAAGACACAGAATGGCAAGCTGGATAAAGAGTCAAGACCCATCGGTGTGCTGTATTCAAGAGACCCATCTCACGTGCAAAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAAATTTACCAAGCAAATGGAAAGCAGAAAAAAGCAGGGGTTGCAATCCTAGTTTCTGACAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAACAAGTTCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAGTGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCATTGAGACAGAAAATTAACAAGGATATTCAGGACTTGAACTCAGCTCTGGATCAAGTGGACCTGATAGATATCTACAGAACTCTCCACCCAAAAACAACAGAATATACATTCTTCTCAGTGCCACATGGCACTTACTCTAAAATTGATCACATAATTGGAAGTAAAACACTCCTCAGCAAATGCAAAAGAACTGAAATCATAACAAACAGTCTCTCAGACCACAGCACAATCAAATTAGAACTCAAGATTAAGAAACTCACTCAAAACCACACAACTACATGGAAATTGAACAACCTGCTCCTGAATGACTCCTGGGTAAATAATGAAATTAAGGCAGAAATCAAGAAGTTCTTTGAAACCAATGAGAACAAAGAGACAACGTACCAGAATCTCTGGGATGCAGCTAAAGCAGTGTTAAGAGGGAAATTTATAGCACTAAATGCCCACATCAAAAAGCTAGAAAGATCTCAAATTGACACCCTAACATCACAACTAAAAGAACTAGAGAACCAAGAGCAAACAAACCCCAAAGCTAGCAGAAGACAAGAAATAACCAAGATCAGAGCGGAACTGAAGGAGATAGAGACAAAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAAAATTAATAAAATAGATAGACTACTAGCTAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACTGACCCCACAGAAATACAAACAACCATCAGAGAATACTATAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTGAACCAGGAAGAAGTTGAATCCCTGAATAGACCAATAACAAGTTCTGAAATTGAGGCAGTAATAAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGATGGATTTACAGCTGAATTCTACCAGAGGTACAAAGAGGAGCTGGTACCATTTCTTCTGAAACTATTCCAAACAATTGAAAAGGAGGGACTTCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGATACAACAAAAAAAGAAAACTTCAGGCCAATATCCCTGATGAACATCGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCACGATCAAGTCGGCTTCATCCCCGGGATGCAAGGCTGGTTCAACATATGCAAATCAATAAATGTAATTCATCACATAAACAGAACTAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTCGATAAAATTCAACATCCCTTCATGTTAAAAACTCTCAATAAACTAGGTATTGATGGAACATACCTCAAAATAATAAGAGCCATTTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCCTTGAAAACTGGCACAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAGGGTATTCAAATAGGAAGAGAGGAAGTCAAATTGTCTCTGTTTGCAGATGACATGATCCTATATCTAGAAAACCCCATCGTCTCAGCCCAAAAGCTTCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCCTATACACCAACAATAGACAAGCAGAGAGCCAAATCATGAATGAACTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGGAATACAGCTAACAAGGGAAGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATCAGAGAGGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAAGTAATTTATAGATTCAATGCTATTCCCATTAAACTACCATTGACATTCTTCACAGAATTAGAAAAAACTACTTTAAAATTCATATGGAACCAAAAAAGAGCCCATATAGCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGACACATAGACCAATGGAACAGAATAGAGATCTCAGAAATAAGACCGCACATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGCAGAAAATTGAAACTGGACCCCTTCCTTACACCTTATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAAACCCAAAACTATAAAAACCCTAGAAGAAAATCTAGGCAATACCATTCAGGACATAGGCATGGGCAAAGATTTCATGATGAAAACATCAAAAGCAATTGCAACAAAAGCAAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAGTGAACAGACAACCTACAGAATGGGAGAAAATTTTTGCAATCTATCCATCTGACAAAGGTCTAATATCCAGAATCTACAAGGAACTTAAACAAATTTACAAGAAAAAAACAAACAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCGGCCAACAAACATATGAAAAAAAGCTCAACATCACTGATCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCATGCCAGTCAGAATGGCGATTATTAAAAAGTCAAGAAACAACAGATGCTGGCGAGGCTGTGGAGAAATAGGAACGCTTTTACACTGTTGGTGGGAATGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAAGACCTAGAACCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGAATATAAATCATTCTATTATAAAGATACATGCACATGTATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAGGAATGAGATCATGTCCTTTGCAGGGACATGGATGGAGCTGGAAGCCATTATCCTCAGCAAACTAACACAGGAACAGAAAACCAAACACCGCATGTTCTCACTTATAAGTGGGAGCCTGAACAATGAGAACACATGGACACAGGGAGGGGAACAACACACACTGGGGCCTGTCGGGGGGGGGCTGGGCGGGGGGAGGGAGAGCATCAGGATAAATAGCTAATGCATGCTGGGCTTAATACCTAGGTGATGGGTTGATAGGTGCAGCAAACCACCATGGCACACGTTTACCTATGTAACAAACCTGCACGTCCTGCACATGTATCCCGGAACTTAAAATAAAATTAAATAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA10.ORF1.hs4_gibbon.pars,L1PA10.ORF2.hs5_gmonkey.marg,1260,2282,2349,6173,6409,236
L1PA11,CAAGATGGCCGATTAGAAGCAGCTGTGGTCCGCAGCACTCACAGAGAGGAATGAAAAGGGGCGAGTGAATTCAGCACCTTCAACTGAAATATCCAGGTTCTCACATTGGGACTGACTAGGCAAACAACTTGACCCACGGAGAACGAAGAAAAGCAGGGGGGGGTGACGGCCCACCCGGGAGCGGCACGGAGCCAAGGGAACCCCCACCCCCAGCCAAGGGAAGCGGTGAGTGATTGTGCGACCCCGCCCGGGAAACCACGCTTCTCCCATGGATCTTTGCAACCCGTGGATCAGGAGATCCCCTCGTGAGCCCACGCCACCAGGGCCTTGGGTCCGATACACAGAGCTGTGTGGAGTCTCGGCAGAGCAGCCGCTCAGGCACACACAGAGACCCAGGAGTTTTACATACTCTGGCCCCGGGATCCCCAGCAAGGCGGGAGATCCATCTGTACATATCCCTAGGAAGGGGGCTGAATCCAGGGAGCCAAGCAGCGTCATTCTGCGGGCCCCACTTCCACGGCACCTCACAAGTTAAGACCCACTGGCTTGGAATTCCAGCCAGCCAGTGGCAGCAGGCTGGAGTCTGCCTGAGATGGGACTGAGTTCCCGGGGGGAGGGGCGGCCACCATCTCTGTGGTTCGGTAGACTCAGCTGTTCCAGCCTGCCGGCTTTGGAGAATACAGATGGTCCGGACGAGGAAGGGTCCCCCACAAGCAGCACAGCTGCTTTGCCAGATCGTGGCCAGACTGCTTCTTTAAGTGGGACCCCAATCCATTCCTCCTCACTGGGCGGGACCTCCCTGTGGGGGCTTCAGCCACTCCAGCCAGGGTTCTACGGACAGAGCTCTGATCTCTCCCTGGGACGGAGCTCCTGGGGGGAGGGGCGGCCACCATCTCTGTGGTTCGGTCGACTCAGCCGTTCCAGCCTGCTGGCTTTGGAGAGTCCAAGCGGTCCGGACGAGGAAGGGTTCCCCCCAATGCAGCACACCTGCTCTACCAAAAAGCAGCCAGACTGCTTTTTAAGCAGGTCCCTGATCCCGTTCCTCCTGACTGGGTGAGACCTCCCAACAGGGGTCTCCAGCCACCTCCTACAGGTGCGTTCGGGCTGGCAACAGGTCAGTACCCCTGGGACGGAGCTTCCAGAGGAAGGAGCAGGCTGCCATCTTTGCTGTTTCGCAGCCTTCACTGGTGATACCTCCAGGTACGGGAAAAACCGAGGCAACTAGGGTCTGGAGCGGACCCCCAGCAAACCGCAGCAGCCCTACAGTAGAGTGGCCTGACTGTTAAAAGAAAAACAAACAAAAAAAAAAAAACAACAACAACAAAAAAAGACCCCACAAAAACCCCATTCAAAGGTCAGCAACCTCAAAGATCGAAGGTAGATAAGCCCACAAAGTGAGAAAGAATCAATGCAAAAACACTGAAAACTCAAAAAGCCAGAGTGCCTCTTCTCCTCCAAATGACCACAACACCTCTCCAGCAAGGGCACAGAACTGGGCTGAGGCTGAGATGGCTGAATTGACAGAAGTAGGCTTCAGAAGGTGGGTAATAACGAACTTCGCTGAGCTAAAGGAGCATGTTGTAACCCAATGCAAAGAAGCTAAGAATCATGATAAAACAATACAGGAGCTGATAGCCAGAATAGCCAGTTTAGAGAGGAACATAACTGACCTGATGGAGCTGAAAAACACAACACAAGAACTTCACAATGCAATCACAAGTATCAATAGCAGAATAGACCAAGTGGAGGAAAGAATCTCAGAGCTTGAAGACTATCTTTCTGAAATAAGACAGGCAGACAAGAATAGAGAAAAAAGAATGAAAAGGAATGAACAAAACCTCTGAGAAATATGGGATTATGTAAAGAGACCGAACCTATGACTGATTGGGGTACCTGAAAGAGACGGGGAGAATGGAACCAAGTTGGAAAACATACTTCAGGATATCATCCAGGAGAACTTCCCCAACCTAGCAAGACAGGCCAACATTCAAATTCAGGAAATGCAGAGAACCCCAGTAAGATACTCCATGAGAAGATCAACCCCAAGACACATAATCATCAGATTCTCCAAGGTCGAAATGAAAGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGCCAGGTCACCTACAAAGGGAAGCCCATCAGACTAACAGTGGACCTCTCAGTGGAAACCCTACAAGCCAGAAGAGATTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTCCAACCCAGAATTTCATATCTGGCCAAACTAAGCTTCATAAGCGAAGGAGAAATAAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATTCGTCACCACCAGGCCTGCCTTGCAAGAGCTCCTGAAGGAAGCACTAAATATGGAAAGGAAAAACCATTACCAGCCACTACAAAAACACACTGAAGTAACACAGACCAGTGACACTATGAAGCAACCACATAAACAAGTCTGCAAAATAACCAGCTAGCATCATGTGACAGGATCAAATTCACACATAACAATACTAACCTTAAATGTAAATGGGCTAAATGCCCCAATTAAAAGACACAGAATGGCAAGCTGGATAAAGAGCCAAGACCCATCGGTATGCTGTCTTCAAGAGACCCATCTCACGTGCAAAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAAATTTACCAAGCAAATGGAAAACAGAAAAAAGCAGGGGTTGCAATCCTAGTTTCTGACAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGTTCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAGTGGGAGACTTTAACACCCCACTGACAATATTAGACAGATCATCAAGACAGAAAATTAACAAAGATATTCAGGACCTGAACTCAGCTCTGGATCAAGTGGACCTGATAGATATCTACAGAACTCTCCACCCCAAAACAACAGAATATACATTCTTCTCATCGCCACATGGCACTTACTCTAAAATTGATCACATAATCGGAAGTAAAACACTCCTCAGCAAATGCAAAAGAACTGAAATCATAACAAACAGTCTCTCAGACCACAGCACAATCAAATTAGAACTCAAGATTAAGAAATTCACTCAAAACCACACAACTACATGGAAATTGAACAACCTGCTCCTGAATGACTCTTGGGTAAATAATGAAATTAAGGCAGAAATCAAGAAGTTCTTTGAAACTAATGAGAACAAAGAGACAATGTACCAGAATCTCTGGGATGCAGCTAAAGCAGTGTTAAGAGGGAAATTTATAGCACTAAATGCCCACATCAAAAAGCTAGAAAGATCTCAAGTTAACAACCTAACATCACAACTAAAAGAACTAGAGAACCAAGAGCAAACAAACCCCAAAGCTAGCAGAAGACAAGAAATAACCAAGATCAGAGCTGAACTGAAGGAGATAGAGACAAAAAAAACCCTTAAAAAAATCAATAAATCCAGGAGCTGTTTTTTTAAAAAAATTAATAAAATAGATAGACCACTAGCTAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAAACACAATCAGAAATGATAAGGGGGATATCACCACTGACCCCACAGAAATACAAACAACCATCAGAGAATACTATAAACACCTCTATGCACATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTGAACCAGGAAGAAATTGAATCCCTGAATAGACCAATAATGAGTTCTGAAATTGAGGCAGTAATAAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGACAGATTCACAGCTGAATTCTACCAGAGGTACAAAGAAGAGCTGGTACCATTTCTACTGAAACTATTCCAAAAAATTGAAAAGGAGGGACTCCTCCCTAACTCATTCTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGATACAACAAAAAAAGAAAACTTCAGGCCAATATCCTTGATGAACATCGATGCAAAAATCCTCAATAAAATACTGGCAAACCAAATCCAGCAGCACATCAAAAAGCTTATCCACCACGATCAAGTTGGCTTCATCCCCGGGATGCAAGGTTGGTTCAACATACGCAAATCAATAAATGTGATTCATCACATAAACAGAACTAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTCGATAAAATTCAACATCCCTTCATGTTAAAAACTCTCAATAAACTAGGTATTGAAGGAACATACCTCAAAATAATAAGAGCCATATATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCCTTGAAAACCGGCACAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAGGGTATTCAAATAGGAAGAGAGGAAGTCAAATTATCTTTGTTTGCAGATGACATGATCCTATATCTAGAAAACCCCATCGTCTCAGCCCAAAAGCTTCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACTAGCATTCCTATACACCAACAACAGGCAAGCAGAGAGCCAAATCATGAATGAACTCCCATTCACAATTGCTACAAAAAGAATAAAATACCTAGGAATACAGCTAACAAGGGAAGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAAGAAATCAGAGAGGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAAGTAATTTATAGATTCAATGCTATTCCCATTAAACTACCATTGACATTCTTCACAGAATTAGAAAAAACTATTTTAAAATTCATATGGAACCAAAAAAGAGCCCAAATAGCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAGAACAGACACATAGACCAATGGAACAGAATAGAGAACTCAGAAATAAGACCACACACCTACAACCATCTGATCTTCGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAGAACTGGCTAGCCATATGCAGAAAATTGAAACTGGACCCCTTCCTTACACCATATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAAACCCAAAACTATAAAAACCCTAGAAGAAAATCTAGGCAATACCATTCAGGACATAGGCACGGGCAAAGATTTCATGATGAAAATGCCAAAAGCAATTGCAACAAAAGCAAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAGTGAACAGACAACCTACAGAATGGGAGAAAATTTTTGCAATCTATCCATCTGACAAAGGTCTAATATCCAGAGTCTACAAGGAACTTAAACAAATTTACAAGAAAAAAAACAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATACATGCGGCCAACAAACATATGAAAAAAAGCTCAACATCACTGATCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACGCCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAACAACAGATGCTGGCGAGGTTGCGGAGAAAAAGGAATGCTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAAGACCTAGAGGCAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGAATATAAATCATTCTATTATAAAGATACATGCACGCGTATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCTAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAGGAACGAGATCATGTCCTTTGCAGGGACATGGATGGAGCTGGAAGCCATTATCCTCAGCAAACTAATGCAGGAACAGAAAACCAAACACCGCATGTTCTCACTTATAAGTGGGCTGAATGATGAGAACACATGGACACATGGGGGGGAACAACACACACTGGGGCCTGTCGGGGGGTGGGGGGGTTGGGGGAGGGAGAGCATCAGGAAGAATAGCTAATGGATGCTGGGCTTAATACCTAGGTGATGGGATGATCTGTGCAGCAAACCACCATGGCACACGTTTACCTATGTAACAAACCTGCACATCCTGCACATGTACCCCTGAACTTAAAAGTTGAAGAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA11.ORF1.hs6_sqmonkey.marg,L1PA11.ORF2.hs6_sqmonkey.pars,1395,2417,2484,6302,6537,235
L1PB2,GGAAGATGGCAGATAGGAGACAGGGCTAACGTGCAGCTCCCACTTGGACGAACAGAACAGTGTGTGGAGACTCACACTGTGAACTTTTGCTCCAAGAACCACCGCAGGAACGTACCAGGAAAACCAAAAGAATTCACAGATCCTTTGAAAGAAGCGGCATGCCACTGCAAACTTCACAAGACAGGTGAAAAACTGTGAGTTCCCAAAGTGTGAGAGGGGGAAAACCTGCCTCCGAACACACATCCCCACTGGGGAATCTGAAAATCCAGATCACGAGAGAAGGATTTAACCTTACCTAGAGCTGAAATGGATTTAGGGAGCTGCGTGAAATATAAAAGTAGAAGCAGCAGCAGGAAGAGCCCTGCAGGCACTCCCAGTCTCCAGCTTGAGCCCAGGGAAGCCATTCCTGACTTTATCTCACAGGGGCCCTTGGGGAAGGCAGCCAGCAGAACGGGGGAGGGGTCATAGGGTGAAGGAAGCTTCCAACTAAACTTTGTGATAATTTTGACTGGGCACAAATTTTCTTGAGCAGAATCCAGGGGGTAAACGGGAGCTGCTGCAGATACGAGTGCTGCCTGCAGAAGAGGCGCTGCCTGTCTTGTGGGCAGACGGGGAGGGGTGAGGCCTGAAAGCCATGCTTGCTTTCTCAGCGGGGAAGCTTATGGCCTGGGGCAGGTTCGAGTTCCGTGCGCAGGCTGCCTGGATCTAAACTCGGCACTGTTAGTGGGGCACTGCAGGAGCGAGACCAGCCTCACCAACTGCGTGGGAGCTGGGTGAGGCCTTTCGCTACTGGCTGTCCCCCACTTCCCTGGCGAACTATATTACACAGCAGAGGCAGCCATAATCCCCTCTGGAACATAACCCCATTGGCCTGAGAACCACCCCCTTCCCCCCATCCCCCACAGTGGCCATGGCAAGCCCCGCCCAAGGAGAGTCTGAGCTCAGACCCGCCTAACCCTGCCCCCACCTGATGGTTTTTCTCTACCTGCCCTGGTAGCCGAACACAAAAGACATAAACTCTTGGGAGCTTTATGGCCCTGCCCATCACCTGAGAAACCAGAATACTTCCCCTGGCCAACTTAGGGCAAGCTTATATCCCCCTGCTACTACCGCAGCTGGTGCTCTCTTGAAAGCGCCACCTCCTGGCTGGAGGCCAACCAACTCAGGCCATTACAGCAACTCATGACAGAATAACCCTGCTCCCAGGAAGGAGAAAACAACAGCTAATTCCACTGCCTGCAACATCCTGGCTAACCAGAGGTCCTGAGTCTGTCCACGTGACAACTTCACTGCTAGCATAACCAGCATTTGAGAAAGCCAGCACACTAAACATATCTACAACCAAGGACTCTCACAGAGTCTACTTCACTCCCCTGCCACCTCCACCAGAGCAGGTGCTGGTATCCACGGCTGGGAGACCTGAAGACGGATCACATCACAGGACTCTTTGCAGACATTCCCCAGCACCAGCCCAGAGCCTGGTAGCCCCGCTGGGTGGCTAGACCCAGAAGAGCAATAACAATCACTGCAGTCTGGCTCTCAGGAAGCCCCATCCCTAGGGGAAGGGGGAGAGCACCACATCAAGGGATCACCCCGTGGGACAAAAGAATCTGAACAGCAGGCCTTGAGTTCCAGATTTTTCCACTGAAATAGTCTACCCAAGTAATATGACAAAACAAGGTTCTATAAACCCCCCAAAAGTCCACACTAGCTCCCCAGCAATGGATCCAAACCAAGAAGAAATCTCTGAATTGCCAGATAAAGAATTCAGAAGGTTGATTATTAAGCTACTCAAGGAGATACCAGAGAAAGGTGAAAACCAACTTAAAGAAATTAAAAAAACAATACAGGATATTGATGAAAAATTCTCCAGAGAAATAGATATCATAAAGAAAAAACAATCACAACTTCTGGAAATGAAAGACACACTTAGAGAAATACAAAATGCACTGGAAAGTTTCAACAATAGACTAGAACAAGTAGAAGAAAGAACTTCAGAGCTCAAAGACAAGGCTTTCAAATTAACCCAATCAGACAAAGACAAAGAAAAAAGAATTTTAAAAAATGAACAAAGCCTCCAAGAAATTTGGGATTATGTTAAATGGCCAAACCTAAGAATAATTGGTGTTCCTGAGGAAGAAGAGAAATCTAAAAGTTTGGAAAACTTATTTGAGGGAATAATTGAGGAAAACTTCCCTGGCCTTGCTAGAGATCTAGACATCCAAATACAAGAAGCTCAAAGAACACCTGGGAAATTCATCACAAAAAGATCATCACCTAGGCACATAGTCATCAGGTTATCTAAAGTCAAGACAAAGGAAAGAATCTTAAGAGCTGTGAGACAAAAGCATCAGGTAACCTATAAAGGAAAACCTATCAGATTAACAGCAGATTTCTCAGCAGAAACCTTACAAGCCAGAAGGGATTGGGGTCCTATCTTTAGCCTCCTCAAACAAAATAATTGTCAGCCAAGAATTTTGTATCCAGCAAAACTAAGCTTCATAAATGAAGGAGAGATAAAGTCTTTTTCAGACAAACAAATGCTGAGAGAATTTACCACTACCAAGCCAGCACTACAAGAAATGCTAAAAGGAGTTCTAAATCTTGAAAACAAAACCTCAAAATACACCAAAATAGAACCTCCTTAAAGCATAAATCTCACAGGGCCTATAAAACAATAACACAATGAAAAATGAAAAAAAACAAGGTATTTAGGCAACAACTAGCATGACATCTCAATACTAACATTGAATGTAAATGGCCTAAATGCTCCACTTAAAAGATACAGAATGGCAGAATGGATAAAAATCCACCAACCAAGTATCTGCTGTCTTCAAGAGACTCACCTAACACATAAGGACTCACATAAACTTAAGGTAAAGGGGTGGAAAAAGATATTCCATGCAAATGGAAACCAAAAGCGAGCAGGAGTAGCTATTCTTATATCAGACAAAACAGACTTTAAAGCAACAACAGTTAAAAAAGACAAAGAGGGACATTATATAATGATAAAAGGATTAGTCCAACAGGAAAATATCACAATCCTAAATATATATGCACCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTACTAGACCTAAGAAATGAGATAGATGGCAACACAATAATAGTGGGGGACTTCAATACTCCACTGACAGCACTAGACAGGTCATCAAGACAGAAAGTCAACAAAGAAACAATGGACTTAAACTATACCCTAGAACAAATGGACTTAACAGATATTTACAGAACATTCTACCCAACAACTGCAGAATATACATTCTTTTCATCAGCACATGGAACATTCTCCAAGATAGACCATATGATAGGCCACAAAACAAGTCTCAATAAATTTAAGAAAATTAAAATTATATCAAGTACCCTCTCAGACCACAGTGGAATAAAACTGGAAATTAACTCCAAAAGGAACCCTCAAAACTATACAAATACATGGAAATTAAATAATCTGCTCTTGAATGATCTTTGGGTCAACAATGAAATCAAGATGGAAATTAAAAAATTCTTTGAACTGAATGATAATAGTGACACAACTTATCAAAACCTCTGGGATACAGCAAAAGCAGTGCTAAGAGGAAAGTTCATAGCATTAAATGCCTACATCAAAAAGTCTGAAAGAGCACAAATAGACAATCTAAGGTCACACCTCAAGGAACTAGAGAAACAAGAACAAACCAAACCCAAACCCAGCAGAAGAAAAGAAATAACAAAGATCAGAGCAGAACTAAATGAAATTGAAACAAAAAAAATACAAAAGATAAATGAAACAAAAAGCTGGTTCTTTGAAAAGATAAACAAAATTGATAGACCATTAGCAAGATTAACCAAGAAAAGAAGAGAGAAGATCCAAATAAGCTCAATTAGAAACAAAATGGGAGATATTACAACTGATACCACAGAAATACAAAAGATCATTCAAGGCTACTATGAACACCTTTATGCACACAAACTAGAAAATCTAGAGGAGATGGATAAATTCCTGGAAATATACAACCCTCCTAGATTAAATCAGGAAGAAATAGAAACTCTGAACAGACCAATAACAAGTAGCAAGATTGAAACAGTAATTAAAAAATTGCCAAAAAAAAAAAGTCCAGGACCAGATGGATTCACAGCTGAATTCTATCAGACATTCAAAGAAGAATTGGTACCAATCTTACTGAAACTATTCCAAAAGATAGAGAAAGAGGGAATCCTCCCTAAATCATTCTATGAAGCCAGTATCACCCTAATACCAAAACCAGGAAAGGACATAACAAAAAAAGAAAACTACAGACCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCTAACCAAATCCAACAGCATATCAAAAAGATAATACACCATGATCAAGTGGGTTTCATACCAGGGATGCAGGGATGGTTTAACATATGCAAGTCAATAAATGTGATACATCACATAAACAGAATTAAAAACAAAAATCATATGATCATCTCAATAGATGCAGAAAAAGCATTTGACAAAATCCAGCATCCCTTTATGATTAAAACCCTCAGCAAAATTGGCATAGAAGGGACATACCTCAAGGTAATAAAAGCCATCTATGACAAACCCACAGCCAACATTATACTGAACGGGGAAAAGTTGAAAGCATTCCCCCTGAGAACTGGAACAAGACAAGGATGCCCACTTTCACCACTTCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCCAAATCGGTAAAGAGGAAGTCAAACTGTCACTGTTCACTGATGATATGATTGTATACCTAGAAAACCCTAAAGACTCATCCAAAAAGCTCCTAGATCTGATAAATGAATTCAGTAAAGTTTCAGGATACAAAATCAATGTACACAAATCAGTAGCACTGCTATACACCAACAATGACCAAGCTGAGAATCAAATCAAGAACTCAACCCCTTTTACAACAGCTGCAAAAAAAATAAAATACTTAGGAATATACCTAACCAAGGAGGTGAAAGATCTCTACAAGGAAAACTACAAAACACTGCTGAAAGAAATCATAGATGACACAAACAAATGGAAACACATCCCATGCTCATGGATGGGTAGAATCAATATTGTGAAAATGACCATACTGCCAAAAGCAATCTACAAATTCAATGCAATTCCCATCAAAATACCATCATCATTCTTCACAGAACTAGAAAAAACAATCCTAAAATTCATATGGAACCAAAAAAGAGCCCACATAGCCAAAGCAAGACTAAGCAAAAAGAACAAATCTGGAGGCATCACATTACCTGACTTCAAACTATACTACAAGGCTATAGTTACCAAAACAGCATGGTACTGGTATAAAAATAGGCACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAAGCCAAATACTTACAGCCAACTGATCTTTGACAAAGCAAACAAAAACATAAAGTGGGGAAAGGACACCCTATTCAACAAATGGTGCTGGGATAATTGGCAAGCCACATGTAGAAGAATGAAACTGGATCCTCATCTCTCACCTTATACAAAAATCAACTCAAGATGGATCAAAGACTTAAATCTAAGACCTGAAACCATAAAAATTCTAGAAGATAACATCAGAAAAACTCTTCTAGACATTGGCTTAGGCAAAGAGTTCATGACCAAGAACCCAAAAGCAAATGCAACAAAAACAAAAATAAATAGATGGGACCTAATTAAACTAAAAAGCTTCTGCACAGCAAAAGAAATAATCAGCAGAGTAAACAGACAACCCACAGAGTGGGAGAAAATATTCACAAACTATGCATCCGACAAAGGACTAATATCCAGAATCTACAAGGAACTCAAACAAATCAGCAAGAAAAAAACAAATAATCCCATCAAAAAGTGGGCAAAGGACATGAATAGACAATTCTCAAAAGAAGATATACAAATGGCCAACAAACATATGAAAAAATGCTCAACATCACTAATTATCAGGGAAATGCAAATCAAAACCACAATGAGATACCACCTTACTCCTGCAAGAATGGCCATAATTAAAAAATCAAAAAATAATAGATGTTGGCATGAATGTGGTGAAAAGGGAACACTTTTACACTGCTGGTGGGAATGTAAACTAGTACAACCACTATGGAAAACAGTATGGAGATTCCTTAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCTACCCAGAGGAAAAGAAGTCATTATATGAAAAAGACACTTGCACACACATGTTTATAGCAGCACAATTCACAATTGCAAAATTATGGAACCAGCCTAAATGCCCATCAACCAATGAGTGGATAAAGAAAATGTGGTATATATACACCATGGAATACTACTCAGCCATAAAAAGGAATGAAATAATGGCATTTGCAGCAACCTGGATGGAGTTGGAGACCATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAATATCATATGTTCTCACTTATAAGTGGGAGCCTAAGCTATGAGGATGCAAAGGCATAAGAATGATATAATGGACTTTGGGGACTCGGGGGGAAGGGTGGGAGGGGGGTGAGGGATAAAAGACTACACATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCACCAAAATCTCAGAAATCACCACTAAAGAACTTATCCATGTAACCAAAAACCACCTGTTCCCCAAAAACTATTGAAATAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PB2.ORF1.hs6_sqmonkey.marg,L1PB2.ORF2.hs0_human.marg,1662,2609,2730,6533,6747,214
L1MA1,GGGGAGGCGGAGCAAGATGGCAGAATAGAAAGCTCCACCGATTGTCCCCCCTGCAAGGACACCAAGTTAACAACTATCTACACAGAAAAAAACACCTTCATAAGAACCAAAAATCAGGTGAGCTCATAGTACCTGGTTTTAACTTCATATCGCTGAAAGAGGCACTGAAGAAATAGAAAAAACAGTCCTGAATCACCGATGCCACCCCTCCCCCACCCCCGGCAGCGGCAGCATGGTGCAGAGAGCATCTCTGGGTGCTGGGGGAGGGAGAACACAGCAATTGTGAGGCATTGAACTCAGTGCTGTCCTGTTAGAGCAGAAAGGAAAACCAGACCAAACTCAGCTGATGCCCGCCCACGGAGGGAGCATTTAAACCAGCCCTAGCCAGAGGGGAATCGCCGATCCCAGTGGTCCGAACTTGAGTGCCTGCAAACCTCACCACCGAGGGCTACAGCGCTCTGTGTCTCCAAGTAAACTTGAAAGGCAGTCTAGGCCATAAGGACTGCAACTCTTAGGCGAGTCCTAGTGCTGAACTAGGCCCAGAGACAGTGGACTGGGGGGGCACGTGACATACTGAGACACCAGCTGGGGCAGCCAAGGGAGTGCTGGCATCACCCCTCCCCTAACCCCAGGCTGCACAGCTCATGGCTCCAAAAGAGACCCCTTCCTTCCACTTGAGGAGAGGAGAGGGAAGAGTGGGGAGGATTTGTCTTGCATCTTGGATACCAGCTCAGCCACAGCAGGATAGGGCGGTCAGAGTCGTGAGGCCCCTGTTCCAGCCCTAGCTCCCAGATGACATTTCTAGACACACCCTGGGCCAGAAGGGAACCCGCTGCCTTGAAGGAAAGGACCCAGTCCTGGCAGCATTCATCACCTGCTAACTGAAGAGCCCTTGGGCCCTGAATAACCAGCAGCGATACCCAGGTACTACATCGAGGGCCTTGGGTGAGCCTCTGAGACTTGCTGGCTTCAGGTGAGACTCAGCACATTACCAGCTGTGGTGGCTATGGGGCAAAACTCCTTCTGCTTGAGAAAAGCAGAGGGAAAAGTAAAGGGGACTTTGTCTTGCACCTTAGGTACCAGCACGGCCACAGGGGGGTAGAGCACCAAGTGGGCTCTTGGGGTCCCTGATTCCAGGACTTGACTCTTGGATGGCATTTCTGGACCTGCCCTGGGCCAGAGGGGAGCCCACTGCCCTGAAGGGTGAGTCCCAGGCCAGGCAGCATTCACCACAAGCTGACTTAAGAGACCTTGGGCCTTAAGGGAACATCGGTGGTAGTCTGGCAGTACTCCTCGTGGCCTGGGGTGGCGGTGGCTATGGGGTGAGGCTCCTCTGCCTTTGGAAAGGGGAGGGAAGAGTGGGAAGGACTGCATCTTGTGGTTTGAGTGCCAGCTCAGCTGCAATACAATAGAACACCAGGTAGACTTCTAAGGTTTTTGACTCTAGTCCCTGACTCCCGGATGGCACTTCTGGACCCACCCGGGGCCTGGGGGACCTCGCCGCCCTGAAGGGAAGGACACAGGCCTGGCTGGCTTTGCCACCTGCTGATTGTAGAGCCCCAGGGCCTTGAGCGAACATAGGCAGTAGCCAGGGAGTGGTTACAGCAGGCCTTGGGTGAGACCCAGTGCTGTGCTGGCTTCAGGTCTGACCCAGTGCAGTCATAGTGGTGGTGGCCACAGGGGTGCTTGTGTCACTCCACCCCCAGCTTTAGGTGGCTCAGAACAGAGAGAGAGACTCTGTATGTTTGGGAGAAAGTAAGGGAAGAGAACAAGAGTCTCTGCCTGGTAATCCAGAGAATTCTCCCGGATCTTGTCCAAGACCATCAAGGCGGTACCTCTATGAGTCTGCAAGAACCACAGTGTTACTGGGCTTGGGGTGCCCCCTAAAGCAGATACAGCTTAGATCACAACACCCAAGTCCTTTCAAATATCTGGAAAGCCTTCCCAAGAAGGATGGCTACAAATAAGCCCAGACAGTGAAGACTACAATAAATACCTAACTCTTCAATGCCCAGACACCGAAGAACATCTACTAGCATCAACACCATCCAGGAAAACATGACCTCACCAAATGAACTAAATAAGGCACCAGGGACCAATCCTGGAGAAACAGAGATATGTGACCTTTCAGACAGAGAATTCAAAATAGCTGTGTTGAGGAAACTCAAAGAAATTCAAGATAACACAGAGAAGGAATTCAGAATTCTATCAGATAAATTTAACAAAGAGATTGAAATAATTAAAAAGAATCAAGCAAAATTCTGGAGCTGAAAAATGCAGAAATTTTATTGTATAAATTTACCGGAGAAACAGAGATATGGTATAACAAAGAGATTGAAATAATTTTAAAAAATCAAAGAGAAATTCTGGAGCTGAAAAATGCAATTGGCATACTGAAGAATGCATCAGAGTCCTTTAATAGCAGAATTGATCAAGCAGAAGAAAGAATTAGTGAGCTTGAAGACAGGCTATTTGAAAATACACAGTCAAAGAAGACAAAAGAAAAAAGAATAAAAAACAATGAAGCATGCCTACAGGATCTAGAAAATAGCCTCAAAAGGGCAAATCTAAGAGTTATTGGCCTTAAAGAGGAGGTAGAGAAAGAGATAGGGGTAGAAAGTTTATTCAAAGGGATAATAACAGAGAACTTCCCAAACCTAGAGAAAGATATCAATATCCAAGTACAAGAAGGTTATAGAACACCAAGCAGATTTAACCCAAAGAAGACTACCTCAAGGCATTTAATAATCAAACTCCCAAAGGTCAAGGATAAAGAAAGGATCCTAAAAGCAGCAAGAGAAAAGAAACAAATAACATACAATGGAGCTCCAATACATCTGGCAGCAGACTTTTCAGTGGAAACCTTACAGGCCAGGAGAGAGTGGCATGACATATTTAAAGTGCTGAAGGAAAAAAACTTTTACCCTAGAATAGTATATCTGGTGAAAATATCCTTCAAACATGAAGGAGAAATAAAGACTTTCCCAGACAAACAAAAAGCTGAGGGATTTCATCAATACCAGACCTGTCCTACAAGAAATGCTAAAGGGAGTACTTCAATCAGAAAGAACAAAACTCACTGGTAATAGTAAGTACACAGAAAAACACAGAATATTATAACACTGTAACTGTGGTGTGTAAACTACTCTTATCCTAAGTAGAAAGACTAAATGATGAACCAATCAAAAATAATAACTACAACAACTTTTCAAGACATAGTACAATAAGATATAAATAGAAACAACAAAAAGTTAAAAAGCAGGGGGACGAAGTTAAGGCATAGAGTTTTTATTAGTTTTCTTTTTGCTTGTTTGTTTATGCAAATAGTGTTAAGTTGTTATCAGGTTAAAATAATGGGTTATAAGATAGTATTTGCAAGCCTCATGGTAACCTCAAACCAAAAACATACAATGGATACACAAAAAATAAAAAGCAAGAAACTAAATCATATCACCAGAGAAAATCACCTTCACTAGAGGAAGACAGGAAGGAAAGAAAGAAGGAAGAGAAGACCACAAAACAACCAGAAAACAAATAACAAATGGCAGGAGTAAGTCCTTACTTATCAATAATAACATTGAATGTAAATGGACTAAACTCTCCAATCAAAAGACATAGACTGGCTGAATGGATGAAAAAACAAGACCCATTGATCTGTTGCCTACAAGAAACACACTTCACCTATAAAGACACACATAGACTGAAAATAAAGGGATGGAAAAAGATATTCCATGCCAATGGAAACCAAAAAAGAGCAGGAGTCACTATACTTATATCAGACAAAATAGATTTCAAGACAAAAACTATAAGAAGAGACAAAGAAGGTCACTATATAATGATAAAGGGGTCAATTCAGCAAGAGGATATAACAATTTTAAATATATATGCACCCAACACTGGAGCACCCAGATATATAAAGGAAATATTATTAGAGCTAAAGAGAGAGATAGGCCCCAATACAATAATAGCTGGAGACTTCAACACCCCACTTTCAGCATTGGACAGATCTTCCAGACAGAAAATCAACAAAGAAACATCAGACTTAATCTGCACTATAGACCAAATGGATCTAATAGATATTTACAGAACATTTCATCCAAGAGCTGCAGAATACACATTCTTTTCCTCAGCACATGGATCATTCTCAAGGATAGACCATATGTTAGGTCACAAAACAAGTCTTAAAACATTCAAAAAAATTGAAATAATATCAAGCATCTTCTCTGACCACAATGGAATAAAACTAGAAATTAATAACAAGAGGAATTTTGGAAACTATACAAATACATGGAAATTAAACAATATGCTCCTGAATGACCAGTGGGTCAATGAAGAAATTAAGAAGGAAATTGAAAAATTTCTTGAAACAAATGATAATGGAAACACAACATACCAAAACCTATGGGATACAGCAAAAGCAGTACTAAGAGGGAAGTTTATAGCTATAAGTGCCTACATCAAAAAAGAGGAAAAACTTCAAATAAACAATCTAATAATGCATCTTAAAGAACTAGAAAAGCAAGAGCAAACCAAACCCAAAATTAGTAGAAGAAAAGAAATAATAAAGATCAGAGCAGAAATAAATGAAATTGAAATGAAAAAAATACAAAAGATAAATAAAACAAAAAGTTGTTTTTTTGAAAAGTTAAACAAAATTGACAAACCTTTAGCCAGACTAAAAAAAAAAAGAGAGAAGATCCAAATAAATAAAATCAGAAATGAAAAAGGAGACATTACAACTGATACTGCAGAAATTCAAAGGATCATTAGTGGCTACTATGAGCAACTATATGCCAATAAATTGGAAAATCTAGAAGAAATGGACAAATTCCTAGATACATACAACCTACCAAGATTGAACCAGGAAGAAATCCAAAACCTGAACAGACCAATAACAAGTAATGAGATCAAAGCCATAATAAAAAGTCTCCCAGTAAAGAAAAGCCCAGGACCTGATGGCTTCACTGCTGAATTCTACCAAACATTTAAAGAAGAACTAATACCAATCCTACTCAAACTATTCCAAAAAATAGAGGAGGAGGGAATACTTCCAAACTCATTCTATGAGGCCAGTATTACCCTGATACCAAAACCAGACAAAGACACATCAAAAAAAGAAAACTACAGGCCAATATCTCTGATGAATATTGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATTCAACAATACATTAGAAAGATCATTCATCATGACCAAGTGGGATTTATCCCTGGGATGCAAGGATGGTTCAACATATGCAAATCAATCAATGTGATACATCATATCAACAGAATGAAGGATAAAAACCATATGATCATTTCAATTGATGCTGAAAAAGCATTTGATAAAATTCAACATCCCTTCATGATAAAAACCCTCAAAAAACTGGGGATAGAAGGAACATACCTCAACATAATAAAAGCCATATATGACAGACCCACAGCTAGTATCATACTGAATGGGGAAAAACTGAAAGCCTTTCCTCTAAGATCTGGAACACGACAAGGATGCCCACTGTCACCACTGTTATTCAACATAGTACTGGAAGTCCTAGCTAGAGCAATCAGACAAGAGAAAGATATAAAGGGCATCCAAATTGGAAAGGAAGAAGTCAAATTATCCTTGTTTGCAGATGATATGATCTTATATTTGGAAAAACCTAAAGACTCCACAAGAAAACTATTAGAACTGATAAACAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGCATTTCTATATGCCAACAGTGAACAATGTGAAAAAGAAATTTAAAAAGTAATCCCATTTACAATAGCCACACATAAAATTAAATACCTAGGAATTAACTTAACCAAAGAAGTGAAAGATCTCTATAATGAAAACTATAAAACACTGATGAAAGAAATTGAAGAGGACACCAAAAAATGGAAAAATATTCCATGTTCATGGATTGGAAGAATCAATATTGTTAAAATGTCCATACTACCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAAATACCAATGACATTCTTCACAGAAATAGAAAAAAAAATCCTAAAATTTATATGGAACCACAAAAGACCCAGAATAGCCAAAGCTATCCTAAGCAAAAAGAACAAAACTGGAGGAATCACATTACCTGACTTCAAATTATACTACAGAGCTATAGTAACCAAAACAGCATGGTACTGGCATAAAAACAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAACAAATCCACACACCTACAGTGAACTCATTTTTGACAAAGGTGCCAAGAACATACACTGGGGAAAAGACAGTCTCTTCAATAAATGGTGCTGGGAAAACTGGATATCCATATGCAGAAGAATGAAACTAGACCCCTATCTCTCACCATATACAAAAATCAAATCAAAATGGATTAAAGACTTAAATCTAAGACCTCAAACTATGAAACTACTACAAGAAAACATTGGGGAAAATCTCCAGGACATTGGTCTGGGCAAAAATTTCTTGAGCAATACCCCACAAGCACAGGCAACCAAAGCAAAAATGGACAAATGGGATCACATCAAGTTAAAAAGCTTCTGCACAGCAAAGGATACAATCAACAAAGTGAAGAGACAACCCACAGAATGGGAGAAAATATTTGCAAACTACCCATCTGACAAGGGATTAATAACCAGAATATATAAGGAGCTCAAACAACTCTATAGGAAAAAATCTAATAATCTGATCAAAAAATGGGCAAAAGATTTGAATAGACATTTCTCAAAAGAAGACATACAAATGGCAAACAGGCATATGAAAAGGTGCTCAACATCATTGATCATCAGAGAAATGCAAATCAAAACTACAATGAGATATCATCTCACCCCAGTTAAAATGGCTTATATCCAAAAGACAGGCAATAACAAATGCTGGCAAGGATGTGGAGAAAAGGGAACCCTTGTACACTGTTGGTGGGAATGTAAATTAGTACAACCACTATGGAGAACAGTTTGGAGGTTCCTCAAAAAACTAAAAATTGAGCTACCATATGATCCAGCAATCCCACTGCTGGGTATATACCCAAAAGAAAGGAAATCAGTATATCAAAGAGATATCTGCACTCCTATGTTTGTTGCAGCACTGTTTACAATAGCTAAGATTTGGAAGCAACCTAAGTGTCCATCAACAGATGAATGGATAAAGAAAATGTGGTACATATACACAATGGAGTACTATTCAGCCATAAAAAAGAATGAGATCCAGTCATTTGCAACAACATGGATGGAACTGGAGATCATTATGTTAAGTGAAATAAGCCAGGCACAGAAAGACAAACATCACATGTTCTCACTTATTTGTGGGGATCTAAAAATCAAAACAATTGAACTCATGGACATAGAGAGTAGAAGGATGGTTACCAGAGGCTGGGAAGGGTAGTGGGGGGTGGGGGGGAGGTGGGGATGGTTAATGGGTAAAAAAAAAATAGAAAGAATGAATAAGACCTACTATTTGATAGCACAACAGGGTGACTATAGTCAATAATAACTTAATTGTACATTTTAAAATAACTTAAAGAGTGTAATTGGATTGTTTGTAACTCAAGGATAAATGCTTGAGGGGATGGATACCCCATTCTCCATGATGTGCTTATTTCACATTGCATGCCTGTATCAAAACATCTCATGTACCCATAAATATATACACCTACTATGTACCCACAAAAATTAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA1.ORF1.hs0_human.marg,L1MA1.ORF2.hs2_gorilla.marg,2256,3069,3542,7357,7724,367
L1PA14,GAGGTGGCCAAGATGGCCGACTAGAAGCAGCTAGTGTGCGTGGCTCTCACAGAGAGGAATGGAAGGGGCGAGTAAATACAGCACCTTCAACTGAAACATCCAGGTACTCGCATTGGGACTAATCAAGGAAACAACTTGACCCACGGAGAATGGAGAAAAGCAAGGCAGGACGATGGCCCACCTGGGAGCAACATGGAGCCAGGGGAACCTCCCCTGCCCAGGGAAGCGGTGAGTGAATGTGTGACCCCGGGAACCCACGCTTCTCCCATGGATCTTTGCAACCCTCAGGTCAGGAGATCCCCTTGTGAACCCACTCCACCAGGGCCTTCAGTCTGACAGACAGAGCTACGTGGAGTCTTGGCAGAGCAGCCACTCAGGCACACGTGGAGACCTGGGAGCCTTAGATACTTGGGCTTTCCGGGCTTCCCAGCAAAAGTAGCTGCAACTCTGGCAAAGTGGGAGGTTAGACCCCTGTACATACCCCTAGGAAAGAGGCTGAATCCAGGGGGCTGAGCAGCAACAGTCTGCAGGCCCCACTTCCATGGCACCTCACAGGATAAGACCCACTGGCTTGGAATTCCAGCCAGCCACTGGTAGCAGCATTGCACCTCCCTGAGACGGAGCTCCCAGGGGGAGGGGTGGGCCGCCATCTTTGCTGTTTGGGCAACTTAGCCATTCCAGCCTTCGGGCTTTGGAGAGTCCAAGCTGACCAGGGGTGGAAGGGATCCCCCAGCACAGCACAGCTGCTCTACAAAAATGTGGCCAGACTGCTTCTTTAAGCAGGTCCCCGATCCTGTTCCTCCTCACTGGGTGGGACCTCCCAACCGGGGCCTCCAGCCACCCCTACTGGTGTTCTCTGGCTGACAGAGATTTGAAACCTCCCTGGGATGGAGCTCCCAGAGGGAGGGGTGGGCCACCATCTTTGCTGTTTGGGTGACTTAGCTATTCCAGCCTTTGGGCTTTAGAGTGTCTGAGGCAACCGGGGGCTGAAGTGGACCCCCAGCACAGCACAGCTGCTCTATGAAAACGTGGCCAGACTGCTTTTTTAAGTGGGTCCCCGATCCCATTCCTCCTCACTGGGTGGGACCTCCCAACTGGGGTCTCCAGCCACCTCCTACAGGTGCGTTTGGGCCAGCAACAGGTCTGTACCTCCCTGGGATGGAGCTCCCAGAGGGAGGGGCAGGCTGCCATCTTTGCTGTTTTGCAGCCTTCACTGGTGATACCTCCAGGTACTGGAAAATCTGAGGTGACTAGGGACTGGAGCAGGCCCCCAGCATACCGCAGCAGCCCTACGGAAAAGTGGCCAGACTGTTACATGGGTGCCTGTTCCCATATCTCCTCACTGGGCAGGTCCTCCAGGCCTGGGCCTCCAGCCACCCCCTGCCAGAGCTATTGAGCCAGTAGCAACTCAGCAACTCCCTGGACAGAGCCTCCAGGGGCAACTGAAAGCCTCTCTGCCACTGCCTCTGCAGTGGAACTGCCCTTGCTACCCTCGGACTAACGAAGGAGCAAAGACCCTAAGTGCCTTATCCACACCTCCAACAAGCTGCAGTTGACCCAAGGAGAGGAGGCCAGTCCATCTCCCATGGGTCCCACACACCCCCCACTGCTCGTCACCAGACAGGGAACCCCTGGCTTGGGCCCACAGCACAGACCCTCCATCCTGGGCTGATTGCACTGAGTGATTGCTGACCTGCATCTCTCTGGGGTGGAGCCCCCAGGAGACAAGCAAAAGACCCTTGGCCACAACCACTACTAAGGTCCCTTCCTCTGCTGCCTCCAAGTTGGGGAAGGAACATAAACACTGAGATTGCCCCAGAGCTGCAGTGGGCAGCCCAGGAGTGCCAAGCCATGATCTACAGCCAGCACTCAAGGGGGAGAGGAACCCACACTTTCAGAGCATTGAGAGGGAACATGGCTGCAACTGTGAGGAAACATAGGGGAGCCACACAACTGAGCAAGAGTCTACCAACTGACCAATAAGCCTAAGTGCCACCTACTGGATCACACCCCAAAGCTTCAACACCAAAAATACCTCACTAACATACCCCCCTCTGAAACCAGAGACAAGAAGTCAGCTTCAAATAAAGACCCTGCACAAAGCCTCGGCCCAGTGAAAACATCCAGAAAAGAAGTCTATTGACTGTACTCAATCTACACTGCAGTTAAAGGAACACCCACATGCATGAGAATGAGAAAGAACCAATGCAAGAACTCTGGTAACTCAAATGGCCAGAGTGTCATATGTCCTCCAAATGACTACACCAGTTCTCCAACAAGAGTTCTTAACCAGGCTGAACTGGCTGGAATGACAGAAATAGAATTCAGAATATGGATAGGAACAAAGATCATTAAGATTCAGGAGGATGGCAAAACCCAATCCAAGGAAAATAAGAATCACAATAAAGTGATACAGGAGCTGAAGGACAAAATAGCCAGTATAAAAAAGAACCTAATGGGTCTGACAGAGCTGAATAACACAATACAAGAATTTCACAATGCAATCACAAGTATTAACAGCAGAATAAACCAAGCTGAGGAAAGAATCTCAGAACTTGAAGACTGGTTCTCTGAAATAAGACAGTCAGACAAAAATAAAGAAAAAAGAATAAAAAGGAATGAACAAAACCTCCAAGAAGTATGGGATTATGTAAAGAGGCCAAATCTACAAATCATTGGCATCCCTGAAAGGGAGGGGGAGAAAGCAAACAACTTGGAAAACATATTTCAGGATATCATCCATGAAAACTTCCCCAACCTTGCTAGAGAGGCCAACAGTCAAATTCAGGAAATACAGAGAACTCCTGCAAGATTCTACACAAGAAGATCATCCCCAAGACACATAATCATCAGATTTTCCAAGGTCAAAATGAAAGAAAGAATGTTAAAGGCAGCTAGAGAGAAAGGGCAGGTCACCTACAAAGGGAACCCCATCAGGCTAACAGTGGACCTCTCAGCTGAAACCCTACAAGCCAGAAGAGATTGGGGGCCTATATTCAACATTCTTAAAGAAAAAAATCTTCAACCAAGAATTTCATATCCAGCCAAACTAAGCTTCCTAAGTGAAGGAGAAATAAGATCCTTTTCAGATAAGCAAATGTTGAGGGAATTTATTACCACCAGACCTGCCTTACAAGAGATCTTGAAAGGAGCACTAAATATAGAAAGGAAAGACCACTACCAGCTAATACAAAAACACTTAAACACACAGACCAGTGTCACTATAAAGCAACCACACAAACAAGCCAACATAATAACCAGCTAACAACACAATGACATGACAGGATCAAATCCACACATATCAATACTAACCTTGAATGTAAATGGGCTAAATGCCCCACTTAAAAGGCACAGAGTGGCAAGCTGGATAAAAAAGCAAGACCCAATGGTATGCTGTCTTCAAGAGACCCATCTCACACGTAATGACACTCATAGGCTCAAAATAAAGGGATGGAGGAAAATCTACCAAGCAAATGGAAAACAGAAAAAAGCAGGGGTTGCAATCCTAATTTCAGACAAAACAGATTTCAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGTTCAATTCAACAAGAAGACCTAACTATCCTAAATATATATGCACCCAACACAGGAGCACCCAGATTCATAAAGCAAGTTCTTAGAGACCTACAAAGAGACATAGACTCCCACACAATAATAGTGGGAGACTTCAACACTCCACTGACAGTATTAGACAGATCATCGAGGCAGAAAATTAACAAAGATATTCAGGACCTGAACTCAACATTGGACCAAATGGATCTGATAGACCTTTACAGAACTCTCCACCCCAAAACAACAGAATATACATTCTTCTCATCGCCACATGGCACATACTCTAAAATCGACCACATAATTGGACATAAAACAATCCTCAACAAATGTAAAAGAACCGAAATCATACCAAACACACTCTCAGACCACAGTACAATAAAAATAGAAGTCAAGACTATGAAAATTGCTCAAAACCATGCAATTACATGGAAATTAAACAACATGCTCCTGAATGACTTTTGGGTAAATAATGAAATTAAGGCAGAAATCAAGAAGTTCTTTGAAAATAATGAGAACAAAGATACAACATACCAGAATCTCTGGGACACAGCTAAGGCAGTGTTAAGAGGGAAATTCATAGCACTAAATGCCCACATCAAAAAGTTAGAAAGATCTCAAATTAACAACCTAACTTCACAACTGAAAGAATTAGAGAAGCAAGAACAAATCAACCCCAAAGCTAGCAGAAGACAAGAAATAACAAAAATCAGAGCTGAACTGAAGGAAATTGAGACACAAAAAACCATTCAAAAGATCAATGAATCCAGGAGTTGGTTTTTTGAAAAAATTAATAAAATAGATAGGCCACTAGCTAGACTAATAAAGAAGAAAAGAGAGAAGATCCAAATAAACACAATTAGAAATGATAAAGGGAATGTTACTACTGACCCCACAGAAATAAAAACAACCATCAGAAACTACTATGAACACCTCTATGCACACAAACTAGAAAACCTAGAAGAGATGGATAAATTCCTGGACACATACACCCTCCCAAGACTGAGCCAGGAAGAAATTGATTCCCTGAACAGACCAATAATGAGCTCCAAAATTGAATCAGTAATAAATAGCCTACCAACCAAAAAAAGCCCAGGACCTGATGGATTCACAGCCAAATTCTACCAGATGTACAAAGAAGAGCTGGTACCATTCCTACAGAAACTATTCCAAAAAATTGAGGAGGAGGGACTCCTCCCCAACTCATTCTATGAGGCCAGCATCATCTTGATACCAAAACCTGGCAGAGACACAACAAAAAAAGAAAACTTCAGGCCAATATCCTTGATGAACATTGATGCAAAAATCCTCAACAAAATACTTGCAAACCAAATCCAGCAGCACATCAAAAAGCTAATCCACCATGATCAAGTAGGCTTCATCCCTGGGATGCAAGGTTGGTTCAACATATGCAAATCAATAAATGTGATTCATCACATAAACAGAACTAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCTTTTGATAAAATTCAACACCCCTTCATGTTAAAAACTCTCAATAAACTAGGTATTGAAGGAACATACCTCAAAATAATAAGAGCCATCTATGACAAACCCACAGCCAACATTATACTGAATGGGCAAAAGCTGGAAGCATTCCCCTTGAAAACCGGCACAAGACAAGGATGCCCTCTCTCACCACTTCTATTCAACATAGTATTGGAAGTCCTAGCCAGAGCAATCAGGCAAGAGAAAGAAATAAAGGGCATCCAAATAGGAAGAGAGGAAGTCAAACTATCTCTGTTTGCAGATGACATGATTCTATATCTAGAAAACCCCATAGTCTCAGCCCAAAAGCTCCTTCAGCTGATAAACAACTTCAGCAAAGTTGCAGGATACAAAATCAATGTACAAAAATCACTAGCATTCCTATACACCAACAACAGCCAAACTGAGAGCCAAATCAGAAAGGCAATCCCATTCACAATTGCCACAAAAAGAATAAAATACCTAGGAATACAGCTAACCAGGGAGGTGAAAGATCTCTACAATGAGAATTACAAAACACTGCTCAAAGAAATCAGAGAAGACACAAACAAATGGAAAAACATCCCATGCTCATGGATAGGAAGAATCAATATCATTAAAATGGCTATACTGCCCAAAGCAATTTACAGATTCAATGCTATTCCTATCAAACTACCAATGACATTCTTCACAGAACTAGAAAAAACTATTTTAAAATTTATATGGAACCAAAAAAGAGCCCAAATAGCCAAGGCAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACGTTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGGCACATAGACCAATGGAACAGAATAGAGAGCCCAGAAATAAGGCCACACATCTACGACCATCTGATCTTTGACAAAGCTGACAAAAACAAGCAATGGGGAAAAGACTCCCTATTCAATAAATGGTGCTGGGATAACTGGCTAGCCATATGCAGAAGATTGAAGCTGGACCCCTTCCTTACACCATATACAAAAATCAACTCAAGATGGATTAAAGACTTAAATGTAAAACCCAAAACTATAAAAACCCTGGAAGACAACCTAGGCAATACCATCCTGGACATAGGAACGGGCAAAGATTTCATGACAAAGACACCAAAAGCAATCACAACAAAAGCAAAAATTGACAAGTGGGATCTAATTAAACTTAAGAGCTTCTGCACAGCAAAAGAAACTATCAACAGAGTAAACAGACAACCTACAGAATGGGAGAAAATATTTGCAAACTATGCATCTGACAAAGGTCTAATATCCAGCATCTATAAGGAACTTAAACAAATTTACAAGAGAAAAACAAACAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATACATGTGGCCAACAAGCATATGAAAAAAAGCTCAATATCACTGATCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAATAACAGATGCTGGCAAGGTTGCAGAGAAAAGGGAACACTTATACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAAGCAGTATGGCGATTCCTCAAAGAGCTAAAAGCAGAACTACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAGAGGAATATAAATCATTCTACCATAAAGACACATGCACGCAAATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCTAAATGCCCATCAATGACAGATTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGATCATGTCTTTTGCGGGAACATGGATGGAGCTGGAGGCTATTATCCTTAGCAAACTAATGCAGGAACAGAAAACCAAATACCACATGTTCTCACTTATAAGTGGGAGCCTAAATGATGAGAACTTATGAACACAAAGAAGGAAACAACAGACACTGGGGTCTACTTGAGGGTGGAGGGTGGGAGGAGGGAGAGGAGCAGAAAAGATAACTATTGGGTACTGGGCTTAATACCTGGGTGATGAAATAATCTGTACAACAAACCCCCGTGACACGAGTTTACCTATGTAACAAACCTTCACATGTACCCCCAAACCTAAAATAAAAGTTAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA14.ORF1.hs2_gorilla.marg,L1PA14.ORF2.hs5_gmonkey.pars,2192,3199,3278,7102,7327,225
L1MA3,GGGGGGAGGCAGAGCAAGATGGCCGAATAGAAGCCTCCACCAATCATCCTCCCTACAGGAACACCAAATTGAACAACTATCCACAAAAAAGCACCTTCATAAGAACCAAAAATCAGGTGAGTGATCACAGTACCTGGTTTTAACTTCATATCACTGAAAGAGGCACTGAAGAGGGTAGGAAAGACAGTCTTGAATTGCCGACGCCACCCCTCCCCCATCCCCTGGCAGTGGCCGCATGGCGTGGAGAGAGAATCTGTGTGCTTGGGGGAGGGAGAGCGCAGTGATTGTGGGACTTTGCATTGGAACTCAGTGCTGCCCTGTCACAGTGGAAAGCAACACTGGGCAGAACTCAGCCAGTGCCCACGGAGGGAGCATTTAGACCAGCCCTAGCCAGAGGGGAATCACCCATCCCAGCGGTTGGAACCTGAGTTCTGGCAAGCCTCGCCACTGCGGGCTAAAGTGCTCTGGGGTCCTAAATAAACTTGAAAGGCAGTCTAGGCCACAAGGACTGCAATTCCTGGGCAAGTCCTGGTGCTGTGCTGGGCTCAGAGCCAGTGGACTTGGGGGGCACATGACCTAGTGAGACACCAGCCGGGGTGGCCAAGGGAGTGCTTGCGCCACCCCTCCCCCAACCCCAGGCAGCACAGCTCGCAGCTCCAGGAGAGACTCCTTCCTTCTGCTTGAGGAGAGGAGAGGGAAGAGTAAAGAGGACTTTGTCTTGCAACTTGGATACCAGCTCAGCCACAGTAGGATAGGGCACCAGGCAGAGTCCTGAGGCCCCCATTCCAGGCCCTAGCTCCCGGACGACATTTCTAGACACACCCTGGGCCAGAAGGGAACCTGCTGCCTTGAAGGGAAGGACCCAGTCCTGGCAGGATTCATCACCTGCTGACTAAAGAGCCCTTGGGCCCTGAATAATCAGCAGTGGTACCCAGGCAGTACTTGCCGTGGGCCTTGGGTGAGACTCAGAGACGTGCTGGCTTCAGGTGTGACCCAGCACATTCCCAGCTGTGGTGGCTATGGGGAGAGACTCCTTCTGCTTGAGGAAAGGAGAGGGAAGAGTAAAGGGGACTTTGTCTTGCAGCTTAGGTACCAGCTTGGCCACAGTGGGGTAGAGCACCAAGCGGGCTCTTGGGGTCCCTGATTCCAGGCCTTGGCTCTTGGATGGCATTTCTGGACCTGCCCTGGGCCAGAGGGGAGCCCACTGCCCTGAAGGGAGAGTCCCAGGCCTGGCAGCATTCACCACAAGCTGACTGAAGAGCCCTTGGGCCTTGAGTGAACATTGGTGGTAGCCAGGCAGTACTCGCCACGGGCCTGGGGTGGTGGTGGCCACGGGGAGAGACTCCTCTGCTTGTGGAAAGGGGAGGGAAGAGTGGGAAGGACTTTGTCTTGTGGCTTGGGTGCCAGCTCAGCCACAGTAGAATAGAGCACCAGGTAGATTCCTAAGGTTTCTGACTCCAGGCCCTGGCTCCTGGATGGCATCTCTGGACCCACCTGGGGCCAGGGGGAACTTGCCACCCTGAAGGGAAGGACACAAGCCTGGCTGGCTTTGCCACCTGCTGATTGTAGAGCCCTAGGGCCTTGAGTGAACATAGGTGGTAGCCAGGCAGTGGTTACTGCAGGCCTTGGGTGAGACCCAGTGCTGTGCTGGCTTCAGGTCTGACCCAGCACAGTCCCAGTGGTGGTGGCCACAGGGGTGCTTGTGTCACCCCTCCCCCAGCTCCAGGCAGCTCAGCACAGAGAGAGACTCCATTTGTTTGGGGGAAAGTAAGGGAAGAGAACAAGAGTCTCTGCCTGGTAATCCAGAGAATTCTTCTGGATCTTATCCAAGACCACCAAGGTGGTACCTCTATGAGTCTGCAAGAGCCACAGCGTTACTGGGCTTGGGGTGCCCCCTAATGCAGATATGGCTGCAGTGACCAAAAACTTAGATCACAACACCCAAGTCCCTTTGAATACCTGGAAAGCCTTCCCAAGAAGGATGGGTACAAACAAGCCCAGACTGTGAAGACTACAATAAATACCTAACTCTTCAATGCCCAGACACTGATGAACATCCACAAGCATCAAGACCATCCAGGAAAACATGACCTCACCAAATGAACTAAATAAGGCACCAGGGACCAATCCTGGAGAGACAGAGATATGTGACCTTTCAGACAGAGAATTCAAAATAGCTGTTTTGAGGAAGCTCAATGAAATTCAAGATAACACAGAGAAGGAATTCAGAATCCTATCAGATAAATTTAACAAAGAGATTGAAATAATTAAAAAGAATCAAGCAAAATTCTGGAGTTGAAAAATGCAATTGATATACTGAAGAATGCATCAGAGTCTCTTAATAGCAGAATTGATCAAGCAGAAGAAAGAATTAGTGAGCTTGAAGACAGGCTATTTGAAAATACACAGTCAGAGGAAACAAAAGAAAAAAGAATAAAAAAGAATGAAGCATGCCTACAAGATCTAGAAAATAGCCTCAAAAGGGCAAATCTAAGAGTTATTGGCCTTAAAGAGGAGGTAGAGAGAGAGATCGGGGTAGAAAGTTTATTCAAAGGGATAATAACAGAGAACTTTCCAAACCTAGAGAAAGATATCAATATTCAAGTACAAGAAGGTTATAGAACACCAAGCAGATTTAACCCAAAGAAGACTACCTCAAGACATTTAATAATCAAACTCCCAAAGGTCAAGGATAAAGAAAGGATCCTAAAAGCAGCAAGAGAAAAGAAACAAATAACATACAATGGAGCTCCAATATGTCTGGCAGCAGACTTCTCAGTGGAAACCTTACAGGCCAGGAGAGAGTGGCATGACATATTTAAAGTGCTGAAGGAAAAAAACTTTTATCCTAGAATAGTATATCCAGTGAAAATATCCTTCAAACATGAAGGAGAAATAAAGACTTTCCCAGACAAACAAAAGCTGAGGGATTTCATCAACACCAGACCTGTCCTACAAGAAATGCTAAAGGGAGTTCTTCAATCTGAAAGAAAAAGGATATTAATGAGCAATAAGAAATCATCTGAAGGTAACAAAACTCACTGGTAATAGTAAGTACACAGAAAAACACAGAATATTATAACACTGTAATTGTGGTGTGTAAACTACTCATATCTTGAGTAGAAAGACTAAAAGATGAACCTATCAAAAATAATAACTACAACAACTTTTCAAGACATAGTATAATAAGATATAAATAGAAACAACAAAAAGTTAAAAAGCGGGGGGATGAAGTTAAAGTGTAGAGTTTTTATTAGTTTTCTCTTTGCTTGTTTGTTAGTTTGTTTATGCAATCAGTGTTAAGTTGTCATCAGTTTAAAATAATGGGTTATAAGATATTATTTGCAAGCCTCATGGTAACCTCAAATCAAAAAACATACAACAGATACACAAAAAATAAAAAGCAAGAAATTAAAACATACCACCAGAGAAAATCACCTTCACTAAAAGGAAGACAGGAAGGAAGGAAAGAAGGAAGAGAAGACCACAAAACAACCAGAAAACAAATAACAAATGGCAGGAGTAAGTCCTTACTTATCAATAATAACATTGAATGTAAATGGACTAAACTCTCCAATCAAAAGACATAGAGTGGCTGAATGGATAAAAAAAAAAGACCCAATGATCTGTTGCCTACAAGAAACACACTTCACCTATAAAGACACACATAGACTGAAAATAAAGGGATGGAAAAAGATATTCCATGCCAATGGAAACCAAAAAAGAGCAGGAGTAGCTATACTTATATCAGACAAAATAGATTTCAAGACAAAAACTATAAAAAGAAAAGAAGGTCATTATATAATGATAAAGGGGTCAATTCAGCAAGAGGATATAACAATTATAAATATAAATGCACCCAACACTGGAGCACCCAGATATATAAAGCAAATATTATTAGAGCTAAAGAGAGAGATAGACCCCAATACAATAATAGCTGGAGACTTCAACACCCCACTTTCAGCATTGGACAGATCATCCAGACAGAAAATCAACAAAGAAACATTGGACTTAATCTGCACTATAGACCAAATGGACCTAATAGATATTTACAGAACATTTCATCCAATGGCTGCAGAATACACATTCTTCTCCTCAGCACATGGATCATTCTCAAGGATAGACCATATGTTAGGCCACAAAACAAGTCTTAAAAAATTCAAAAAAATTGAAATAATATCAAGTATCTTCTCTGACCACAATGGAATAAAACTAGAAATCAATAACAAGAGGAATTTTGGAAACTATACAAACACATGGAAATTAAACAATATGCTCCTGAATGACCAGTGGGTCAATGAAGAAATTAAGAAGAAAATTGAAAAATTTCTTGAAACAAATGATAATGGAAACACAACATACCAAAACCTATGGGATACAGCAAAAGCAGTACTAAGAGGGAAGTTTATAGCTATAAGTACCTACATCAAAAAAGTAGAAAAACTTCAAATAAACAACCTAATGATGCATCTTAAAGAACTAGAAAAGCAAGAGCAAACCAAACCCAAAATTAGTAGAAGAAAAGAAATAATAAAGATCAGAGCAGAAATAAATGAAATTGAAATGAAAAAAAAAATACAAAAGATCAATGAAACAAAAAGTTGGTTTTTTGAAAAGATAAACAAAATTGACAAACCTTTAGCCAGACTAAAAAAAAAAAGAGAGAAGACCCAAATAAATAAAATCAGAGATGAAAAAGGAGACATTACAACTGATACCACAGAAATTCAAAGGATCATTAGAGGCTACTATGAGCAACTATATGCCAATAAATTGGAAAACCTAGAAGAAATGGATAAATTCCTAGACACATACAACCTACCAAGATTGAACCATGAAGAAATCCAAAACCTGAACAGACCAATAACAAGTAATGAGATTGAAGCCATAATAAAAAGTCTCCCAGCAAAGAAAAGCCCAGGACCCAATGGCTTCACTGCTGAATTTTACCAAACATTTAAAGAAGAACTAATACCAATCCTACTCAAACTATTCCAAAAAATAGAGGAGGAGGGAATACTTCCAAACTCATTCTATGAGGCCAGTATTACCCTGATACCAAAACCAGACAAAGACACATCAAAAAAAGAAAACTACAGGCCAATATCCCTGATGAACATTGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATTCAACAACACATTAAAAAGATCATTCATCATGACCAAGTGGGATTTATCCCAGGGATGCAAGGATGGTTCAACATATGCAAATCAATCAATGTGATACATCATATCAACAGAATGAAGGACAAAAACCATATGATCATTTCAATTGATGCTGAAAAAGCATTTGATAAAATTCAACATCCCTTCATGATAAAAACCCTCAAAAAACTGGGTATAGAAGGAACATACCTCAACATAATAAAAGCCATATATGACAGACCCACAGCTAGTATCATACTGAATGGGGAAAAACTGAAAGCCTTTCCTCTAAGATCTGGAACAAGACAAGGATGCCCACTTTCACCACTGTTATTCAACATAGTACTGGAAGTCCTAGCTAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCCAAATTGGAAAGGAAGAAGTCAAATTATCCTTGTTTGCAGATGATATGATCTTATATTTGGAAAAACCTAAAGACTCCACCAAAAAACTATTAGAACTGATAAACAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGCATTTCTATATGCCAACAGTGAACAATCTGAAAAAGAAATCAAGAAAGTAATCCCATTTACAATAGCTACAAATAAAATAAAATACCTAGGAATTAACTTAACCAAAGAAGTGAAAGATCTCTACAATGAAAACTATAAAACATTGATGAAAGAAATTGAAGAGGACACAAAAAAATGGAAAAATATTCCATGTTCATGGATTGGAAGAATCAATATTGTTAAAATGTCCATACTACCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAAATACCAATGACATTCTTCACAGAAATAGAAAAAACAATCCTAAAATTTATATGGAACCACAAAAGACCCAGAATAGCCAAAGCTATCCTGAGCAAAAAGAACAAAACTGGAGGAATCACATTACCTGACTTCAAATTATACTACAGAGCTATAGTAACCAAAACAGCATGGTACTGGCATAAAAACAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAATCCATACATCTACAGTGAACTCATTTTTAACAAAGGTGCCAAGAACATACATTGGGGAAAGGACAGTCTCTTCAATAAATGGTGCTGGGAAAACTGGATATCCATATGCAGAAGAATGAAACTAGACCCCTATCTCTTGCCATATACAAAAATCAAATCAAAATGGATTAAAGACTTAAATCTAAGACCTCAAACTATGAAACTACTAAAAGAAAACATTGGGGAAACTCTCCAGGACATTGGACTGGGCAAAGATTTCTTGAGTAATACCCCACAAGCACAGGCAACCAAAGCAAAAATGGACAAATGGGATCACATCAAGTTAAAAAGCTTCTGCACAGCAAAGGAAACAATCAACAAAGTGAAGAGACAACCCACAGAATGGGAGAAAATATTTGCAAACTATCCATCTGACAAGGGATTAATAACCAGAATATATAAGGAGCTCAAACAACTCTATAGGAAAAAAAATTCTAATAATCTAATTAAAAAATGGGCAAAAGATCTGAATAGACATTTCTCAAAAGAAGACATACAAATGGCAAACAGGTATATGAAAAGGTGCTCAACATCATTGATCATCAGAGAAATGCAAATCAAAACTACAATGAGATATCATCTCACCCCAGTTAAAATGGCTTTTATCCAAAAAACAGGCAATAACAATGCTGGTGAGGATGTGGAGAAAAGGGAACCCTTGTACACTGTTGGTGGGAAAGTAAATTTAGTAAAACCCCTATGGAAAACAGTTTGGAGGTTCCTCAAAAAACTAAAAATAGAACTACCATATGATCCAGCAATCCCACTGCTAGGTATATACCCCAAAAAAAAGAAAATCAGTATATTGAAGAGATATCTGCACTCTCATGTTTATTGCAGCACTATTCACAATAGCCAAAATTTTGGGAAGCAACCTAAGTGTCCATCAACAGATGAATGGATAAAGAAAATGTGGTACATATACACAATGGAGTACTATTCAGCCATAAAAAAGAATGAGATCCTGTCATTTGCAACAACATGGATGGAACTGGAGGTCATTATGTTAAGTGAAATAAGCCAGGCACAGAAAGACAAACTTCGCATGTTCTCACTTATTTGTGGGCTAAAAATTAAAACAATTGAACTCATGGAGATAGAGAGTAGAATGATGGTTACCAGAGGCTGGGAAGGGTAGTGGGGGGGGGGGGGGGGAAGTGGGGATGGTTAATGGGTACAAAAATATAGTTAGAATGAATAAGATCTAGTATTTGATAGCACAACAGGGTGACTACAGTCAACAATAATTTATTGTACATTTTAAAATAACTAAAAGAGTATAATTGGATTGTTTGTAACACAAAGAAAGGATAAATGCTTGAGGTGATGGATACCCCATTTACCCTGATGTGATTATTATGCATTGTATGCCTGTATCAAAATATCTCATGTACCCCATAAATATATACACCTACTATGTACCCACAAAAATTAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA3.ORF1.hs2_gorilla.pars,L1MA3.ORF2.hs5_gmonkey.marg,2284,3031,3514,7335,7706,371
L1MA2,TGATGGGGGGGGGGGGAGAGAAAAAGAGGGAAAGAAATCGGGACACATCATTCTTCCCCCGTGAGAAGGACACCAATTTAACAATACTCACAAAAAAAAAAGCACCTCCATAAGAACCAAAAATCAGGTGAGCACTCATAGTACCTGGTTTTAACTTCATATTACTGAAAGAGGCACTGAAGAGGTAGGAAAAACAGTCCTGAATCGCTGATGCCACCCCTCCCCCAACCCCCGGCAGCGGTGGTGTGGTGTGGAGAGTGTTTCTGGGCGCTGGGGGAGGGAGAGCACAGCAATTGTGAGGCATTGAACTCAGTGCTGTCCTGTTATAGCAGAAAGGAAAACCAGACCAAACTCAGCTGATACCCACCCATAGAGGGAGCATTTAAACCAGCCCTAGCCAGAGGGGAATCACTGATCCCAGCGGTCAGAACTTGAGTTCCCACAAGCCTCACCACCACGGGCTAAAGTGCTCTGGGGCTCCAAATAAACTTGAAAGGCAGTCTAGGCCACAAGGACTGCAACTCCTAGGTGAGTCCTAGTGTTGAACTTGGCCCAGAGACAGTGGACCTGGGGGGGCATGTGACCTACCGAGACACCAGCCAGGGCAGCTAAGGGAGTGCTGGCATCACCTCTCCCCCAACCCCCGGCTGCACAGCTCACAGCTCCAAAAGAGACCCCTTCCTTCCACTTGAGGAGAGGAGAGGGAAGAGTGGGGAGGACTTTGTCTTGCATCTTGGATACCAGCTCAGCCACAGCAGGATAGGGCACCGGTCAGAGTCATGAGGCCCCCATTCCAGGCCCTAGCTCCCAGACGACATTTCTAGACACACCCTAGGCCAGAAGGGAACCCGCTGCCTTGAAGGGAAGGACCCAGTCCTGGCAGGATTCATCACCTGCTAACTGAAGAGCCCTTGGGCCCTGAATAACCAGCAGTGATACCCAGGTACTACGTCGAGGGCCTTGGGTGAGACTCTGAGACTTGCTGGCTTCAGGTGAGACTCAGCACATTCCCAGCTGTGGTGGCTATGGAGCAAGACTCCTTCCTCCTTGAGAAAAGCAGAGGGAAAAGTAAAGGGGACTTTGTCTTGCACCTTAGGTACCAGCTCGGCCACAGGGGGGTAGAGCACCAAGTGGGCTCTTGGGGTCCCCGATTCCAAGACTTGGCTCTTGGACGGCATTTCTGGACCTGCCCTGGGCCAGAGGGGAACCCACTCCCCTGAAGGGTGAGTCCCAGGCCAGGCAGCATTCACCACAAGCTGACTGAAGAGCCCTTGGGCCTTAAGGGAACATCAGCAGTAGTCTGGCAGTACTCCCCGTGGGCCTGTGGTGGTGGTGGCCATGGGGTGAGGCTCCTCTGCCTTTGGAAAGGGGAGAGAAGAGTGGGAAGGACTGCGTCTTGTGGTTTGAGTGCCAGCTCAGCCGCAGTACAATAGAACACCAGGTAGACTTCTAAGGTTTTTGACTCTAGTCCCTGGCTCCCAGACGGCACCTCTGGACCCGCCTGGGGCCTGGGGGAACTTGCTGCCCTGAAGGGAAGGACACAGGCCTGGCTTGCTTTGCCACCTGCTGATTGTAGAGCCCCAGGGCCTTGAGTGAACATAGGCGGTAGCCAGGGAGTGGTTACAGCAGGCCTTGGGTGAGACCCAGTGCTGTGCTGGCTTCAGGTCTGACCCAGCGCAGTCCTAGTGGTGGTGGCCACAGGGGTGCTTGTGTCACTCCATCCCCCGCTCGATTTGGCTCGGTCAGAAAAGAGAGACTCCCTTTGTTTGGGAGAAAATAAGGGAAGAGAACAAGAATCTCTGCCTGGTAATCCAGAGAATTCTTCCGGATTTTGTCCAAGACCATCAAGGTGGTACCTCTATGAGTCTGCAAGAACCACAGCGTTACTGGGCTTGGGGTGCCCCCTAAAGCAAATACAGCTTAGATCACAACACCCAAGTCCTTTCGAATATCTGGAAAGCCTTCCCAAGAAGGATGGGTACAAACAAGCCCAGACTGCGAAGACTACAATAAATACCTAACTCTTCAATGCCCAGACACAGATGAACATCTACAAGCATCAAGACCATCCAGGAAAACATGACCTCACCAAATGAACTAAATAAGGCACCAGGGACCAATCCTGGAGAAACAGAGATATGTGACCTTTCAGACAGAGAATTCAAAAAAGCTGTTTTGAGAAAACTCAAAGAAATTCAAGATAACACAGAGAAGGAATTCAGAATTCTATCAGATAAATTTAACAAAGAGATTAAAAATAATAAATAAAATAAAGGAGATGGAATAGATAAGAAGAATCAAGCAGAGTTGAAAAATGCAATTGACATACTGAAGAATGCATCAGAGTCTCTTAATAGCAGAATTGATCAAGCAGAAGAAAGAATTAGTGAGCTTGAAGACAGGCTATTTGAAAATACACAGACAGGAGAAACAAAAGAAAAAAGAATAAAAAACAATGAAGCATGCCTACAAGATCTAGAAAATAGCCTCAAAAGGGCAAATCTAAGAGTTATTGGCCTTAAAGAGGAGGTAGAGAAAGAGATAGGGGTAGAAAGTTTATTCAAAGGGATAATAACAGAGAACTTCCCAAACCTAGAGAAAGATATCAATATTCAAGTACAAGAAGGTTATAGAACACCAAGCAGATTTAACCCAAAGAAGACTACCTCAAGGCATTTAATAATCAAACTCCCAAAGGTCAAGGATAAAGAAAGGATCCTAAAAGCAGCAAGAGAAAAGAAACAAATAACATACAATGGAGCTCCAATACGTCTGGCAGCAGACTTTTCAGTGGAAACCTTACAGGCCAGGAGAGAGTGGCATGACATATTTAAAGTGCTGAAGGAAAAAAACTTTTACCCTAGAATAGTATATCCAGTGAAAATATCCTTCAAACATGAAGGAGAAATAAAGACTTTCCCAGACAAACAAAAGCTGAGGGATTTCATCAACACCAGACCTGTCCTACAAGAAATGCTAAAGGGAGTTCTTCAATCTGAAAGAACAAAACTCACTGGTAATAGTAAGTACACAGAAAAACACAGAATATTATAACACTGTAACTGTGGTGTGTAAACTACTCTTATCCTAAGTAGAAAGACTAAATGATGAACCAATCAAAAATAATAACTACAACAACTTTTCAAGACATAGACAGTACAATAAGATATAAATAGAAACAACAAAAAGTTAAAAAGCAGGGGGACAAAGTTAAGGTGTAGAGTTTTTATTAGTTTTCTTTTTGCTTGTTTGTTTGTTTATGCAATCAGTGTTAAGTTGTTATCAGCTTAAAATAATGGGTTATAAGATAGTATTTGCAAGCCTCATGGTAACCTCAAACCAAAAAACATACAATGGATACACAAAAAATAAAAAGCAAGAAACTAAATCATATCACCAGAGAAAATCACCTTCACTAAAAGGAAGACAGGAAGGAAAGAAAGAAGGAAGAGAAGACCACAAAACAACCAGAAAACAAATAACAAATGGCAGGAGTAAGTCCTTACTTATCAATAATAACATTGAATGTAAATGGACTAAACTCTCCAATCAAAAGACATAGAGTGGCTGAATGGATGAAAAAACAAGACCCATTGATCTGTTGCCTACAAGAAACACACTTCACCTATAAAGACACACATAGACTGAAAATAAAGGGATGGAAAAAGATATTCCATGCCAATGGAAACCAAAAAAGAGCAGGAGTAGCTATACTTATATCAGAAAAAATAAATTTTAAGAAAAAAAATTTTAAAAAGAAACAAAAAAGGTCACTATATAATGATAAAGGGGTCAATTCAGCAAGAGGATATAACAATTTTAAATATATATGCACCCAACACTGGAGCACCCAGATATATATAAAACAAATATTATTAGAGCTAAAGAGAGAGATAGACCCCAATACAATAATAGCTGGAGACTTCAACACCCCACTTTCAGCATTGGACAGATCTTCCAGACAGAAAATCAACAAAGAAACATTAGACTTAATCTGCACTATAGACCAAATGGATCTAATAGATATTTACAGAACATTTCATCCAATGGCTGCAGAATACACATTCTTTTCCTCAGCACATGGATCATTCTCAAGGATAGACCATATGTTAGGTCACAAAACAAGTCTTAAAACATTCAAAAAAATTGAAATAATATCAAGCATCTTCTCTGACCACAATGGAATAAAACTAGAAATCAATAACAAGAGGAATTTTGGAAACTATACAAATACATGGAAATTAAACAATATGCTCCTGAATGACCAGTGGGTCAATGAAGAAATTAAGAAGGAAATTGAAAAATTTCTTGAAACAAATGATAATGGAAACACAACATACCAAAACCTATGGGATACAGCAAAAGCAGTACTAAGAGGGAAATTTATAGCTATAAGTGCCTACATCAAAAAAGAAGAAAAACTTCAAATAAACAACCTAATGATGCATCTTAAAGAACTAGAAAAGCAAGAGCAAACCAAACCCAAAATTAGTAGAAGAAAAGAAATAATAAAGATCAGAGCAGAAATAAATGAAATTGAAATGAAGAAAACAATACAAAAGATCAATGAAACAAAAAGTTGGTTTTTTGAAAAGTTAAACAAAATTGACAAACCTTTAGCCAGACTAAGAAAAAAAGAGAAGACCCAAATAAATAAAATCAGAGATGAAAAAGGAGACATTACAACTGATACTGCAGAAATTCAAAGGATCATTAGTGGCTACTATGAGCAACTATATGCCAATAAATTGGAAAATCTAGAAGAAATGGACAAATTCCTAGACACATACAACCTACCAAGATTGAACCATGAAGAAATCCAAAACCTGAACAGACCAATAACAAGTAATGAGATCAAAGCTGTAATAAAAAGTCTCCCAGTAAAGAAAAGCCCAGGACCTAATGGCTTCACTGCTGAATTCTACCAAACATTTAAAGAAGAACTAATACCAATCCTACTCAAACTATTCCAAAAAATAGAGGAGGAGGGAATACTTCCAAACTCATTCTATGAGGCCAGTATTACCCTGATACCAAAACCAGACAAAGACACATCAAAAAAAGAAAACTACAGGCCAATATCTCTGATGAATATTGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATTCAACAATACATTAAAAAGATCATTCATCATGACCAAGTGGGATTTATCCCTGGGATGCAAGGATGGTTCAACATATGCAAATCAATCAATGTGATACATCATATCAACAGAATGAAGGACAAAAACCATATGATCATTTCAATTGATGCTGAAAAAGCATTTGATAAAATTCAACATCCCTTCATGATAAAAACCCTCAAAAAACTGGGGATAGAAGGAACATACCTCAACATAATAAAAGCCATATATGACAGACCCACAGCTAGTATCATACTGAATGGGGAAAAACTGAAAGCCTTTCCTCTAAGATCTGGAACACAACAAGGATGCCCACTTTCACCACTGTTATTCAACATAGTACTGGAAGTCCTAGCTAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCCAAATTGGAAAGGAAGAAGTCAAATTATCCTTGTTTGCAGATGATATGATCTTATATTTGGAAAAACCTAAAGACTCCACAAAAAAACTATTAGAACTGATAAACAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGCATTTCTATATGCCAACAGTGAACAATCTGAAAAAGAAATAAAAAAAGTAATCCCATTTACAATAGCCACAAATAAAATTAAATACCTAGGAATTAACTTAACCAAAGAAGTGAAAGATCTCTACAATGAAAACTATAAAACACTGATGAAAGAAATTGAAGAGGACACCAAAAAATGGAAAAATATTCCATGTTCATGGATTGGAAGAATCAATATTGTTAAAATGTCCATACTACCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAAATACCAATGACATTCTTCACAGAAATAGAAAAAACAATCCTAAAATTTATATGGAACCACAAAAGACCCAGAATAGCCAAAGCTATCCTAAGCAAAAAGAACAAAACTGGAGGAATCACATTACCTGACTTCAAATTATACTACAGAGCTATAGTAACCAAAACAGCATGGTACTGGCATAAAAACAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAACAAATCCACACACCTACAGTGAACTCATTTTTGACAAAGGTGCCAAGAACATACACTGGGGAAAAGACAGTCTCTTCAATAAATGGTGCTGGGAAAACTGGATATCCATATGCAGAAGAATGAAACTAGACCCCTATCTCTCACCATATACAAAAATCAAATCAAAATGGATTAAAGACTTAAATCTAAGACCTCAAACTATGAAACTACTACAAGAAAACATTGGGGAAACTCTCCAGGACATTGGTCTGGGCAAAAATTTCTTGAGTAATACCCCACAAGCACAGGCAACCAAAGCAAAAATGGACAAATGGGATCACATCAAGTTAAAAAGCTTCTGCACAGCAAAGGAAACAATCAACAAAGTGAAGAGACAACCCACAGAATGGGAGAAAATATTTGCAAACTACCCATCTGACAAGGGATTAATAACCAGAATATATAAGGAGCTCAAACAACTCTATAGGAAAAAATCTAATAATCTAATTAAAAAATGGGCAAAAGATTTGAATAGACATTTCTCAAAAGAAGACATACAAATGGCAAACAGGCATATGAAAAGGTGCTCAACATCATTGATCATCAGAGAAATGCAAATCAAAACTACAATGAGATATCATCTCACCCCAGTTAAAATGGCTTTTATCCAAAAGACAGGCAATAACAAATGCTGGCGAGGATGTGGAGAAAAGGGAACCCTTGTACACTGTTGGTGGGAATGTAAATTAGTACAACCACTATGGAGAACAGTTTGGAGGTTCCTCAAAAAACTAAAAATAGAGCTACCATATGATCCAGCAATCCCACTGCTGGGTATATACCCAAAAGAAAGGAAATCAGTATATAAAAGAGATATCTGCACTCCCATGTTTGTTGCAGCACTGTTCACAATAGCCAAGATTTGGAAGCAACCTAAGTGTCCATCAACAGATGAATGGATAAAGAAAATGTGGTACATATACACAATGGAGTACTATTCAGCCATAAAAAAGAATGAGATCCTGTCATTTGCAACAACATGGATGGAACTGGAGGTCATTATGTTAAGTGAAATAAGCCAGGCACAGAAAGACAAACATCACATGTTCTCACTTATTTGTGGGGATCTAAAAATCAAAACAATTGAACTCATGGAGATAGAGAGTAGAAGGATGGTTACCAGAGGCTGGGAAGGGTAGTGGGGGGGTGGGGGGGGAGGTGGGGATGGTTAATGGGTACAAAAAAAAATAGTTAGAAAGAATGAATAAGACCTAGTATTTGATAGCACAACAGGGTGACTATAGTCAATAATAATTTAATTGTACATTTTAAAATAACTAAAAGAGTATAATTGGATTGTTTGTAACACAAAGGATAAATGCTTGAGGGGATGGATACCCCATTTTCCATGATGTGATTATTATGCATTGCATGCCTGTATCAAAACATCTCATGTACCCCATAAATATATACACCTACTATGTACCCACAAAAATTAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA2.ORF1.hs3_orang.marg,L1MA2.ORF2.hs4_gibbon.marg,2304,3003,3486,7304,7680,376
L1PB3,AGATGGCAGATTGGAGGCATTGCTAGCATGCCTCTCCCACTTGGAAAGACAAAATAGTGTGTAGAGATTCACACTGTGAACTTTTTTCCAAGAAGCAACGCAGGAACTTAACAGGAAAACTGAAAGAAACCACAGACTCTTTGAAAGAAGCAGTAGGCTGCAGCCTACACTGTGAGCCAGGCAAAAAACTGTGAGTCCCCAGAGTGTGAGAGGGGGAGAGACTGCCTTCAGGATACACACCCCCACCGGGGAACCTGAAAATCCAGGCCACAGGGGAAGGCCTTAACCCTACCCAGTGCTGGAACTGATTTAGGGAGCAGTGGGGAATATAAAAGTAGGAGCAGCAGCGGGAAGAGCCTTGTGTGCACTCCCAGTCTCCAGCATGGACCGAGGGAAGCCATTCCTTATTCTACCTCACAGGGGACCTTGCGGAAGTCTGCCAGCTAACTCAGGCAGTGGTCACAGGTTGAGAGAAGCTCCCAACTGAAATTCATGATATAATCTCGAGTGGGGATAAACTCCCTTGGCCAGAACCGGGGGGTGAGTGGGAAGTGTGCTGCAGCCATGGGCACAGGAGCTGGGCGCCCCGGCTTTGCGGGTAGACTGGGAGGGGCATGGCCTGAAAGCCATGGTTGCTGTCTCCGCCGGGAAGGCTTATGGCCTGGGGCAGTTTTGAGTTCTGAGTACAGGCTGCCTGGAACTTAGCTTGCTGCTGCTAGTGGAACACTGTGGGTGTGAGATCTGCCTTGCCAAGTGCGTGGGAGCTGGGTGGGGCTTACTGCCGCCTGCTACTCCCCACTCCCTGTGCAAACTCTTCTGTGCAGCAGAGGCAGCTATGCTCCTCTCTGGAACATTACCCCAGTGGCCTGAGAACCGCCCCCCGACCCCCACAGGGGCTGCTGCTTGCCCCGCATGTGGAGAGCCAGAGCGCAGACCTGCCTGACCCAGCCCCCACCTGGCTTTGCCCCTCCACCCGCCCTGGTAGCTTAACACAAAGGACAGAAACTTTTGGGAGCTTTATGGCCCCGCCCATTGCCTGAGAAACCAGAGTACCTCCCCTGGGTAACATAAGGCAAGCACAAATCCCACTGCTACTACCACAGCTGGTGCTCTTTTGCAAGCGCCACCTCCTGGCTGGAGGCCAACCAACACAGTCCATTATAGCATCTGCAGGTAGAATAACACTGCACCCAGGAAGGAGAAAACTTGTGCGTGACCTCAGCTATCACCATTGCCTGCACCACGCTGGCTAACCAGGAGGTCCTGAGTCTGTCCATGTGACCAGTTCATTACTACTACAACTGGCATTTGAGAAAGCCAACACACTAAGGCTATTAATAATCTATAAATCTAAGAAAATTTCTAAAGTCCATCTCACCCCCCTGCCACCCCCACCAGAGCTGGTGCTGGTACCCACTGCTGGGAGACTTGAGAACAGGTCACATCACTGGATCCCTTGCAGACATTCCCCAGCACCAGCCTGGAGTGTGGCAGCCCCACTGGGTGGCTAGACTCAGAGGAGCAACAGCATTCACAGTAGTCTGGCTCTCAGGGACTCCTACTCCTAGGGGAAGGGGGAGTGCACCACATCAAGGGAACACCCCATGGGACAAAAGGAATCTGGATGGCAGGCCTTGAGTCCCAGATCTTTCTACTGGTGGGAAGTTTCTTTCAGCAGAGGCACAGTTGCAGTGCTGGGCTCAGTGGGGAAAGTCTGAAGCTCTACCCCAACAGTCAGGCATCCCTGGTGCTCATGAAGGGTCTTTTGGAGAAGGGGACGTCTTTTCCCCCTTGTCCACCACTGCAGACACAGCTGGGGCTTTTCCCATGGGAGCTCAGCATGGGTACACCTATAGACAGCCTTTCTGGAACACTTCAGGGTGACTGCATCCCCACAGGAGGAGTACACTCCAGGTTCGGGCTTGCATGAGAGGCAGAGTCACAATTCCTCTCTACTTGGAACATCAACATTCCTACAGATGAAAAGAGGTGCTGGTCTGATCTGAATAGCCAGAATACTGGGTCAGGAGTGTGACTGGGAGGTGGATTGCTTTCCTGCTGGCCTGGCAGGGGAGCTGAGGTGGCTCCAACCCTTCCCCCTGATAAGACCTCAGTGTGTTTCACTGAGAGTTTCTCCACCTACCTCTGTCAAGGCTGGGACCTCTGCCCACTATTGGGTATTGCATTTATCCACCTGCTTTAGCCACAACCAGTTTCTACCCAGGGACACCTCCCCTACTGGCCTGAAGCCTGAACTATTCAACCCATTAAAAAAATTACTGGGGAAAAAATAAATATAAAAAAATATCCCCCAGGGAAGGAATGAGATAAGCTTCAAGAGACCTCTGCCATTCCAACCCCATAGGAGATAGTGAACTTGCTCACACACCAAGCACATTGCTACTACAACCAGCATCTGAGAAAGCCATCATACAAAGACTCTCTATTACCAAGAAACTAGGAACTTATACAGAGAGTCTTCACCCCTGAAAGCACCAAGAGCCGAATTAGGCTATAATAAACTATAAACATTAAAGTCACATCCTTAAGGGGAACAATAAATTTAAAAACAAACAGAAAAAAAAATTTTTAAAAAAAGTCAAATCAAAAATAAATTCAAGAATAATTAGAAGAAATAGTCTACCCAAAAGAGAAGAAAAAAGAAAAATAATTGAGAAGGAACCAGAAAAATAATTCTGGCAATATGACAAAACAGGGTTCTATAACACCCCCAAAAGATCACACTAACTCTCCAGCAATGGATCCAAACCAAGATGAAATCTTTGAAATACCAGATAAAGAATTCAAAAGGTTGATTATTAAGTTACTCAAGGAGATACAAGAGAAAGGTGAAAACCAACATAAAGAAATTACAAAAAAAATTCAGGATATGAATAAAAAATTTTCTAAAGAGATAGATATTTTAAAGAAAAATCAATCAGAACTTCTGGAAATGAAAGACACATTTAGGGAATTACAAAATGCAGTGGAAAGTTTTAACAATAGACTAGACCAAGTAGAAGAAAGAATTTCAGAGCTTGAAGACAAGGCTTTTGAATTAACCCAATCAGACAAAAATAAAGAAAAAAGAATAAAAAGAAATGAACAAAGTCTCCAAGAAATATGGGATTATGTAAAATGGCCAAACCTAAGAATCATTGGTGTTCCTGAGGGAGAAGAGAAAGCAAAAAGTTTGGAAAACTTATTTGAGGGAATAATTGAGGAAAACTTCCCTGGCCTTGCTAGAGATTTAGACATCCAAATACAAGAAGCTCAAAGAACTCCTGGGAGATTCATTGCAAAAAGAACATCACCAAGGCATATAGTCATCAGGCTATCTAAAGTCAATATGAAGGAAAGAATTCTAAGAGCAGTGAGACAAAAGCATCAGGTAACCTATAAAGGAAAACCTATCAGACTAACAGCAGACTTCTCAGCAGAAACCTTACAAGCCAGAAGGGATTGGGGTCCTATCTTTAGCCTCCTTAAACAGAATAACTGTCAGCCAAGAATTTTGTATCCAGCAAAACTAAGTTTCATAAATGAAGGAGAAATAAAGTCTTTTTCAGACAAGCAAATGCTGAGGGAATTTGTCACTACCAGACCAGCCCTACAAGAAATGCTAAAAGGAGTTCTAAATCTTGAAACAAAAGGTCATTTTGAACAAGAATAGAACCTCTTGAAAGCATAAAACTCACAGGGCCTATAAAACAATAACACAATGAAAAAACACAATAAAGAAAACAAAGTATCTAGGTAACAACTAACATGTGACTGGAACAGTACCTCACATCTCAATATTAACATTGAATGTAAATGGCCTAAATGCTCCACTTAAAAGATACAGATTGGCAGAATGGATAAAAAATCACAAACCAAATATCTGCTGTCTTCAAGAGACTCACCTAACATATAAGGATTCATATAAACTCAAGGTAAAGGGGTGGAAAAAGATATTCCATGCAAATGGAAACCAAAAGCAAGCAGGAGTAGCTATTCTTATATCAGATAAAACAGACTTTAAAGCAACAACAGTAAAAAAAGACAAAGAAGGTCATTATATAATGATAAAAGGATCAATCCAACAAGAAGATATTACAATCCTAAATTTATATGCACCTAACACTGGAGCTCCCAGATTCATAAAACAATTACTACTAGACCTAAGAAATGAGATAGACAGCAACACAATAATAGTGGGGGACTTCAACACTCCACTGACAGCACTAGACAGATCATCAAGACAGAAAGTCAACAAAGAAACAATGGACTTAAACTACACTCTAGAACAAATGGACCTAACAGATATTTACAGAACATTCTACCCAAGAACTGCAGAATATACATTCTTCTCATCAGCACATGGAACATTCTCCAAGATAGACCATATGATAGGCCACAAAACAAGTCTCAATAAATTTTAAAAAATCAAAATCATATCAAGTATCTTCTCAGACCACAGTGGAATAAAACTAGAAATCAACTCCAAAAGGAACCCTCAAAACTATACAAATACATGGAAATTAAACAATCTGCTCCTGAATGATTTTTGGGTTAACAATGAAATCAAGATGGAAATTAAAAAATTCTTTGAAATGAATGATAATAGTGACACAAGTTATCAAAACCTCTGGGATACAGCAAAAGCAGTGCTAAGAGGAAAGTTTATAGCACTAAATGCCTACATCAAAAAGTCTGAAAGATCACAAATTGACAACCTAATGTCACACCTCAAGGAACTAGAGAAACAAGAACAAACTAAACCCAAAGCTAGCAGAAGAAAAGAAATAACAAAGATCAGAGCAGAACTAAATGAAATTGAAACAAAAAAAATACAAAAGATCAATGAAACAAAAAGTTGGTTCTTTGAAAAGATAAACAAAATTGATAGACCATTAGCTAGATTAACCAAGAAAAGAAGAGAGAAGATTCAAATAAGCTCAATTAGAAATGAAACTGGAGACATTACAACCAACACCACAGAAATACAAAAGATCATTTAAGACTACTATGAACACCTCTATGCACACAAACTAGAAAATCTAGAGGAAATGGATAAATTCCTGGAAACATACAACCCTCCTAGATTAAATCAGGAAGAAATAGAAACCCTGAACAGACCAATAACAAGCAGTGAGATTGAATCAGTAATTTAAAAAATTTCCAAAAAAAAAAAAAGCCCAGGGCCAGATGGATTCACAGCTGAATTCTACCAGACATTCAAAGAAGAATTGGTACCAATCCTACTGAAACTATTCCAAAAGATTGAGAAAGAGGGAATCCTCCCTAACTCATTCTATGAAGCCAGTATCACCCTGATACCAAAACCAGGAAAGGACATAACAAAAAAAGAAAACTACAGACCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCTAACCAAATCCAACAGCACATCAAAAAGATAATACACCATGATCAAGTGGGTTTCATCCCAGGGATGCAGGGATGGTTTAACATATGCAAGTCAATAAATGTGATACATCACATAAACAGAATTAAAAACAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCATTCAATAAAATCCAGCATCCCTTTATGATAAAAACCCTCAACAAACTAGGCATAGAAGGGACATACCTCAAAATAATAAAAGCCATATATGACAAACCCACAGCCAACATCATACTGAATGGGGAAAAGTTGAAAGCATTCCCCCTGAGAACTGGAACAAGACAAGGATGCCCACTTTCACCACTTCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGGCAAGAGAAAGAAATAAAGGGCATCCAAATTGGAAAAGAGGAAGTCAAACTATCACTGTTTACCGATGATATGATTGTATACCTAGAAAACCCTAAAGACTCCTCCAAAAGACTCCTAGATTTGATAAATGAATTCAGTAAAGTCTCAGGTTACAAAATCAATGTACACAAATCAGTAGCACTGCTATACACCAACAATGACCAAGCTGAGAATCAAATCAAGAACTCAATCCCTTTTACAATAGCTGCAAAAAAAATAAAATACCTAGGAATATACTTAACCAAGGAGGTGAAAGATCTCTACAAGGAGAACTACAAAACACTGCTGAAAGAAATCATAGATGACACAAACAAATGGAAACACATCCCATGCTCATGGATTGGAAGAATCAATATTGTGAAAATGACCATACTGCCCAAAGCAATCTACAGATTCAATGCAATTCCTATCAAAATACCAACATCATTTTTCACAGAATTAGAAAAAACAATCCTAAAATTCATATGGAACCAAAAAAGAGCCCAAATAGCCAAAGCAATCCTAAGCAAAAAGAACAAATCTGGAGGCATCACATTACCAGACTTCAAATTATACTACAAGGCTATAGTTACCAAAACAGCATGGTACTGGTATAAAAGTAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAAGCCAAATACTTACAACCAACTGATCTTTGACAAAGCATACAAAAACATAAATTGGGGAAAGGACACCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCACATGTAGAAGAATGAAACTGGATCCCTATCTCTCACCTTATACAAAAATCAACTCAAGATGGATCAAAGACTTAAATCTAAGACCTGAAACCATAAAAATTCTAGAAGATAACCTAGGAAAAACTCTTCTGGACATTGGCCTAGGCAAAGAATTTATGACTAAGACCCCAAAAGCAAATGCAACAAAAACAAAAATAAATAAATGGGACCTAATTAAACTAAAAAGCTTCTGCACAGCAAAAGAAATAATCATCAGAGTAAACAGACAACCCACAGAATGGGAGAAAATATTTGCAAACTATGCATCTGACAAAGGACTAATATCCAGAATCTACAAGGAACTCAAACAAATCAGCAAGAAAAAAAATAATCCCATCAAAAAGTGGGCAAATGACATGAATAGACATTTCTCAAAAGAAGATATACAAATGGCCAACAAACATATGAAAAAATGCTCAACATCACTAATCATCAGGGAAATGCAAATTAAAACCACAATGAGATACCACCTTACTCCTGCAAGAATGGCCATTATTAAAAAGTCAAAAAACAATAGATGTTGGCATGGATGTGGTGAAAAGGGAATACTTATACACTGCTGGTGGGAATGTAAATTAGTACAACCTCTATGGAAAACAGTATGGAGATTTCTTAAAGAACTAAAAGTAGATCTACCATTCGATCCAGCAATCCCACTACTGGGTATCTACCCAAAGGAAAAGAAGTCATTATATCAAAAAGACACCTGCACACATATGTTTATTGCAGCACAATTCACAATTGCAAAGATATGGAACCAACCTAAGTGCCCATCAACCAATGAGTGGATAAAGAAAATGTGGTATATATACACCATGGAATACTACTCAGCCATAAAAAAGAATGAAATAATGTCTTTTGCAGCAACTTGGATGGAGCTGGAGGCCATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAATACCATATGTTCTCACTTATAAGTGGGAGCGAGCTAAGCTATGGGTATGCAAAGGCATACAGAGTGGTATAATGGACATTGGAGACCAGAAGGGGGGAGGGTGGGAGGGGGGTGAGGGATAAAAAACTACATATTGGGTACAATGTACACTACTCGGGTGACGGGTGCACTAAAATCTCAGACTTCACCACTATACAATTCATCCATGTAACCAAAAACCACTTGTACCCCAAAAGCTATTGAAATAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PB3.ORF1.hs6_sqmonkey.marg,L1PB3.ORF2.hs4_gibbon.marg,2672,3666,3771,7592,7812,220
L1PA13,GGAGAGGGCAAGATGGCCGACTAGATGCAGCCAGGTGGAACAGCTCCCACTGAGGGACTGAGATGACTGGCGTGCTCCTAACAGATCTTCAGAGGGAAGGCACTGAGAGTGGACGGAGGGAAGACACAGAAGCTGGGCTGAAGGGGGAGAAAGCTGGGAACCCTGCATGGGGCTACTGCGCACCGGGACTCATTCCTGGCCCCCAACGGCTCCGGGGGAATGGGTGAGTTGAACTGGCAAGGAGCAACCTGCTCTCACCATGGGCCTCTGGAACCCCGGCAGGAGGAGACCCCTCGACCACCACAGACACTTGAGTTGGCAGGGAGAGCTGCTTAGAGAAGTGGTAGGGGCAGCAAGCCAGCTGATGTGGAGCCCAGAGGGTTTGGTGCGGGAGCATCTGTAGTGGAGCATGGCCAGGGACGGCCATCCCCCTAGGCTCGACTTGCTCCCATAGGAGACTTTAGCCCTAGGGGAACTGTCGGACCTGAACTCTGCAGGGCGGTCTTGCCCATCAGATGGGGCTGGTCTGACCTGAGCACCCCTTGGTCTGCTGGCCTCTCCTGGGGCCCCAGCCTGGCCATGCCTGCTTGCAGGGCAGTCTCGGGTGCCCTGGGGGCCCACACCATAGCTTCTGCGCTGGCGGACCATGCCTGACCAGTGGAGAGCTCCAGCAGGGCAGCCCCTATGGCCACGCACCAGCCTGCATGCTCCCTCCCCATACTGCAGCTTCCCCCGGGCCCATGGCAACTCCCCACATCACTTTGCTGGTGTGTGTCTGCACGGGCGGGTTTTGCTTTCCTTGCCCCGCCAGCATGCGGGAGTGCAGTCCGCCCCCCCCCCCCCCGCCGACCACCATTGCAGACGGAGCCTTGGTGGGCACAGAGCCAGCCAGCCCCGCCCCACCAGTGCCCTGCCCTTGCGCTAACACTGCACAGAGAACAGCGGATCCTCCCCCACCCTGAGCGACCACTCCTGCTTGCGGGCACAGAGAAGGCACCCAGACCTGTGCCTGCCAGCACCCCCCCCCCGAGCCAACACCACCTCCAGTGTGACTGCGCACACAGTCTCCAGCAGGGGCCCCCTTCCCCCCCCCCCCCCAGCTGCATTGCCTCTGCCACTGTGGTGAATGCCCGCAGGGAGGCAGGCACCCCGGCACCCGCTAGCACTCTGCTGCAGCTGCTGATCGTGCACCCCACTCCGCTGCTGCTACCACTGCTGCTGGCACGTGCGAATGAGGATGGATCCCGCTGTCACCGCACTACGAAATGCTTTGGCTGACACCACCCATCGGAGTGTAGTGACCAGCGGTCTGGGAGATCTCCATTGTCCAGGCGCCCCTCGGCCCCCCCAGCGCAGTGGATTCCTAACCTCGAGGAGCCAGAGAACAAAGTCGGGGCCCAATACAAGTCCCCCAGAGTTAGAGCACGCAGTCCAGGAGTTGGGAGCTGAGCGTTGGCCCCCTAAAATCTTCCAGAAATGAAGCCAGTCAGCTGAATCCACCTTATACCACAATCAAACCCTCAAGGTCATCAAATAGGATAAAAAAAAAAAAAAAACATCCAAAGGTCAGCAACCTCAAAGATTGAAGGTAGATAAGCCCACAAAGTGAGAAAGAATCAGCACAAGAACCCTGACAACTCAAAAAGCCAGAGTGCCTTCTTTCCTCCAAATGACCGCATCACCTCTCCAGCAAGGGTTCTGAACCAGGCTGAGATGGCTGAAATGACAGAAATAGAATTCAGAATATGGATAGGAACGAAGATCATTGAGCTACAGGAGTACATTGAAACCCAATCCAAGGAAGCTAAAAATCATGATAAAACAATGCAGGAGCTGACAGACAAAATAGCCAGTATAGAAAAGAATGTAACCAACCTGATAGAGCTGAAAAACACACTACAAGAATTTCATAATGCAATCACAAGTATTAATAGCAGAATAGACCAAGCAGAGGAAAGAATCTCAGAGCTTGAAGACTGGCTTTCTGAAATAAGACAGTCAGACAAGAATAGAGAAAAAAGAATGAAAAGGAATGAACAAAACCTCCGAGAAATATGGGATTATGTAAAGAGACCAAATCTATGACTCATTGGTGTCCCTGAAAGAGATGGGGAGAATGGAACCAACTTGGAAAACATATTTCAGGATATCATCCATGAGAACTTCCCCAACCTAGCTAGAGAGGCCAACATTCAAATTCAGGAAATGCAGAGAACCCCAGTAAGATACTTCACAAGAAGATCATCCCCAAGACACATAATCATCAGATTCTCCAAGGTCGAAATGAAAGAAAAAATGTTAAAGGCAGCTAGAGAGAAAGGTCAGGTCACCTACAAAGGGAAGCCCATCAGACTAACAGCAGACCTCTCAGCAGAAACCCTACAAGCCAGAAGAGATTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAAATTCCAACCCAGAATTTCATATCTGGCCAAACTAAGCTTCATAAGCGAAGGAGAAATAAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATTTGTTACCACCAGACCTGCCTTACAAGAGCTCCTGAAGGAAGCACTAAATATGGAAAGGAAAGACCATTACCAGCCACTACAAAAACACACTGAAGTAACACAGACCAGTGACACTATAAAGCAACCACATAAACAAGTCTGCAAAATAACCAGCTAACATCATGTGACAGGATCAAATCCACACATATCAATACTAACCTTGAATGTAAATGGGCTAAATGCCCCAATTAAAAGACACAGAGTGGCAAGCTGGATAAAGAACCAAGACCCATTGGTATGCTGTCTTCAAGAGACCCATCTCACATGCAATGACACACATAGGCTCAAAATAAAGGGATGGAGAAAAATCTACCAAGCAAATGGAAAACAGAAAAAAGCAGGGGTTGCAATCCTAGTTTCAGACAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGTTCAATTCAACAAGAAGATCTAACTATCCTAAATATATATGCACCCAACACAGGAGCACCCAGATTCATAAAGCAAGTTCTTAGAGACCTTCAAAGAGACTTAGACTCCCACACAATAATAGTGGGAGACTTTAACACCCCACTGACAATATTAGACAGATCATTGAGACAGAAAATTAACAAAGATATTCAGGACCTGAACTCAGCACTGGATCAAATGGACCTGATAGACATCTACAGAACTCTCCACCCAAAAACAACAGAATATACATTCTTCTCATTGCCACATGGCACATACTCTAAAATTGATCACATAATCGGAAGTAAAACACTCCTCAGCAAATGCAAAAGAACTGAAATCATAACAAACCTCTCAGACCACAGCACAATCAAATTAGAAATCAAGACTAAGAAATTCACTCAAAACCATACAATTACATGGAAATTGAATAACCTGCTCCTGAATGACTTTTGGGTAAATAATGAAATTAAGGCAGAAATCAAGAAGTTCTTTGAAACTAATGAGAACAAAGATACAACATACCAGAATCTCTGGGACACAGCTAAGGCAGTGTTAAGAGGGAAATTTATAGCACTAAATGCCCACATCAAAAAGTTAGAAAGATCTCAAGTTAACAACCTAACATCACAACTAAAAGAACTAGAGAACCAAGAGCAAACAAATCCCAAAGCTAGCAGAAGACAAGAAATAACCAAAATCAGAGCTGAACTGAAGGAGATTGAGACACAAAAAACCATTCAAAAGATCAATAAATCCAGGAGCTGTTTTTTTGAAAAAATTAATAAAATAGATAGACCACTAGCTAGACTAATAAAGAAGAAAAGAGAGAAGATTCAAATAAACACAATCAGAAATGACAAGGGGGATATTACCACTGACCCCACAGAAATACAAACAACCATCAGAGAATATTATGAACACCTCTATGCACATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTGAACCAGGAAGAAATTGAATCCCTGAACAGACCAATAATGAGCTCTGAAATTGAGTCAGTAATAAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGATGGATTCACAGCTGAATTCTACCAGATGTACAAAGAAGAGCTGGTACCATTCCTGCTGAAACTATTCCAAAAAATTGAGGAGGAGGGACTCCTCCCTAACTCATTCTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGACACAACAAAAAAAGAAAACTTCAGGCCAATATCCTTGATGAACATTGATGCAAAAATCCTCAACAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTAGGCTTTATCCCTGGGATGCAAGGTTGGTTCAACATATGCAAATCAATAAATGTGATTCATCACATAAACAGAACTAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCTTTTGATAAAATTCAACACCCCTTCATGTTAAAAACTCTCAATAAACTAGGTATTGAAGGAACATACCTCAAAATAATAAGAGCCATCTATGACAAACCCACAGCCAACATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCCTTGAAAACCGGCACAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTCCTGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAGGGCATCCAAATAGGAAGAGAGGAAGTCAAACTATCCCTGTTTGCAGATGACATGATCCTATATCTAGAAAACCCCATAGTCTCAGCCCAAAAGCTCCTTAAGCTGATAAACAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACTAGCATTCCTATACACCAACAACAGTCAAGCCGAGAGCCAAATCAGGAATGCAATCCCATTCACAATTGCCACAAAAAGAATAAAATACCTAGGAATACAGCTAACCAGGGAGGTGAAAGATCTCTACAAGGAGAACTACAAAACACTGCTCAAAGAAATCAGAGATGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATTGTTAAAATGGCCATACTGCCCAAAGCAATTTATAGATTCAATGCTATTCCTATTAAACTACCATTGACATTCTTCACAGAACTAGAAAAAACTATTTTAAAATTCATATGGAACCAAAAAAGAGCCCGAATAGCCAAGGCAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAGGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAGGCCACACACCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTCAATAAATGGTGCTGGGATAACTGGCTAGCCATATGCAGAAGATTGAAACTGGACCCCTTCCTTACACCATATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAAACCCAAAACTATAAAAACCCTGGAAGACAACCTAGGCAATACCATTCTGGACATAGGAACGGGCAAAGATTTCATGACAAAGACACCAAAAGCAATTGCAACAAAAGCAAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCAACAGAGTAAACAGACAACCTACAGAATGGGAGAAAATTTTTGCAAACTATGCATCTGACAAAGGTCTAATATCCAGCATCTATAAGGAACTTAAACAAATTTACAAGAAAAAAAACAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTTTCAAAAGAAGACATACATGTGGCCAACAATCATATGAAAAAAAGCTCAACATCACTGATCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAATAACAGATGCTGGGAAGGTTGTGGAGAAAAAGGAAAACTTATACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCAATTCCTCAAAGACCTAAAAACAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGAATATAAATCATTCTATTATAAAGACACATGCACATGTATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCTAAATGCCCATCAATGGTAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGATCATGTCCTTTGCAGGAACATGGATGGAGCTGGAGGCCATTATCCTTAGCAAACTAATGCAGGAACAGAAAACCAAATACCGCATGTTCTCACTTATAAGTGGGCTAAATGATGAGAACACATGGACACATAGAGGGGAACAACACACACTGGGGCCTATTGGAGGGTGGAGGGTGGGAGGAGGGAGAGGATCAGGAAAAATAACTAATGGGTACTAGGCTTAATACCTGGGTGATGAAATAATCTGTACAACAAACCCCCATGACACAAGTTTACCTATATAACAAACCTGCACATGTACCCCTGAACTTAAAATAAAAGTAAAATAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA13.ORF1.hs6_sqmonkey.pars,L1PA13.ORF2.hs5_gmonkey.pars,1606,2622,2689,6504,6730,226
L1PA15,AGCCAAGATGGCTGACTAGACGCAGCCAGGAGGAACATCTCCCACGGAGAGACTGGGACATCAGGAAGACTGGCACACTCTGAGCAGATCTTCGGAGGGAAGGCATTGAGAGTGGATGGAGGGAGGACACAGATGCTGGGCTGAAGGGGGAGGAAGCTGGGAACCCTGCACGGGGCTACTGAGCACCGGGACTCGTTCCTGGCCCCCAGCAACTCCTGGGGAAGGGGTGAGTTGAGCAGGCGAGGAGTGGCCCACTCTCACCATGGACCTCCGGAATCCTGGCAGCAGGAGACCCCACAACCCCCCCGACACTTGAGCTGGCAGGGAGAGCTGCTTAGAGAGGTGGTAGGGGCAGGACTCCAGCCTGTGCGGAGCCCAGAGGGTTTGGTGTGGGAATGTCTGCAGTGGAGCACGGCCAGGGATGCCCATCCCTCAAGGCTCGCCATGCTCCTCTAGGAGACTTTAGCCTTAGGGTGACTGTCAGACCTGGACAGAGCAGGGCGGTCTTGCCCATGAGATGGGGCCAGTCTGATCTGAGTGCCCCCCTGTCTGCTGGCCTCTCCCGGGGCCCCAGCCTGGCCGCACCTGCTTGCAGTGCAGCCTTGGATGCCCAACCAGGGTGCCTCCTAGGGGCCCTCATCATAGCTCCTTCGCTGGCAGACCATGCCTGACCATCAGAGAGCTCCAGCAGAGTGGCCCCCGCCGACGTGCACCAGCCCACCCGCATCCCCTCCCCCCCGCAGCCTCCCCTGTGCCTCTTCTCTGGCGTGCTCTCTCGCACCCACTTTCCCCTGCCCCCCCCCCCATCGCTTTGTTGGTGCGGGTGGATGGGCGCACCTCCCCTCCCTTCCCCCACCAGCTTGTGTGTGTGCGTGCACCCGGCCACGCCACTGCTGCTGCCAGGATTGGTCCCCACTGCCCTACCGCCTGACCATTGACAATCGGGCACTTGGCAATGCTGCCATTGCAAGCGGCAGCACCTGCATGGATGCCACAAACCTTGCTCCCCATTGTTCTTGAATGCACAATGATACAAACACACACATGGAACCCACCCCCCCCCCCCCCTGCCCCGTGCTGCCGCCGCTGCTGGCGCGAATGCGCGCACGGACGCCGGCAGCCCTGCCCCCCCCCGCCCCCTCCGCCAGCTGCCACCGCCAGGGCGGCCGGCGCTGCCGTGCCTCCCTGCACGAAACCCTCCCCCCCGCCCCACCCCCTTCTTGCCCCCACCGCCGGCGTAAGCACATGCAGGAATGCTGCAGCCCTACTCCTGCTGGTACCCCGCCCCAGCCGACGCGCGTGCACCCCGCTGCGCTGCCACGGCTGCTGGCATGCACGAGTGAGCACGGATCCCGCTGCCACCACCCCGATGAAGTTTTGGCCGGCACCAGAGTGTTGTGGCCAGCGGACTGGGAACACCTCGGCCCCTCCAGTGCGCAGGTTCCTAACCTCGAGGGGCCAGAGAACAAAGCCGGGGGCCCGGTACCAGCCCCCCAGAGTTAGAGCATGCAGCCCAGGAGTGCTGAGCTGAGCCTTGGCCCCCTAAAATCTTCCAGAAACGAAGCCAGTTGACTGAACCCACCTTATACCACAATCAAACCCCCAAGGGCATCAAAGAAGATAAAAGCAAAAAAAAAAACAAAAAAAAAAAAACCCATCCAAAGGACAGCAACTTCAGATTGAAGGAACATCAGCCCACACAGAAGAACCAGTGCAAGAACTCTGGCAACTCAAAAAGCCAGAGTGTCTTCTTACCTCCAAACGACTGCACTAGTTCCCCAGCAATGGTTCTTAACCAGGCTGAAATGGCTGAAATGACAGAAATAGAATTCAGAATATGGATAGGAATGAAGATCATTGAGATTCAGGAGAAAGTTAAAACCCAATCCAAGGAATCTAAGGAATACAATAAAATGATACAGGAGCTGAAAGATGAAATGGCCATTTTAAGAAAGAACCAAACTGATCTGATAGAGCTGAAAAACTCACTACAAGAATTTCATAATACAATCACAAGTATTAACAGCAGAATAGACCAAGCTGAGGAAAGAATCTCAGAGCTCAAAGACTGGTTCTCTGAAATAACTCAGTCAGACAAAAATAAAGAAAAAAAAATAAAAAAGAATGAACAAAACCTCCAAGAAATATGGGATTATGTAAAGAGACCAAATCTATGACTCATTGGCATCCCTGAAAGAGAGGGAGAGAAAGCAAGCAACTTGGAAAACATATTTGAGGATATCATCCATGAAAATTTCCCCAACCTCACTAGAGAGGCCAACATTCAAATTCAGGAAATGCAGAGAACCCCTGTGAGATACTATACAAGAAGACCATCCCCAAGACACATAGTCATCAGATTCTCCAAGGTTAAAATGAAAAAAAAAATGTTAAAGGCAGCTAGAGAGAAGGGGCAGGTCACCTACAAAGGGAACCCCATCAGGCTAACAGCAGACCTTTCAGCAGAAACCCTACAAGCCAGAAGAGATTGGGGGCCTATATTCAGCATTCTTAAAGAAAAGAAATTCCAACCAAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGCAAAGGAGAAATAAGATCCTTTTCAGACAAGCAAATGCTAAGGGAATTCATTACCACCAGACCTGCCTTACAAGAGGTCCTTAAGGGAGTGCTAAATATGGAAAGGAAAGACCATTACCAGCCACCACAAAAACACACTTTAAGTACATAGACCATTGACACTATAAAGCAACCACACAATCAAGTCTGCATAATAACCAGCTAACAACATGTGACAGGATCAAATCTGCACATATCAATATTAACCTTGAATGTAAATGGGCTAAATGCCCCAATTAAAAGGCACAGAGTGGCAAGTTGGATAAAGAAGCAAGACCCAACTGTATGCTGTCTTCAAGAGACCCATCTCACATGCAATGACACCCATAGGCTCAAAGTAAAGGGATGGAGAAAAATCTACCAAGCAAATAGAAAACAGAAAAAAGCAGGGGTTGCTATTCTAATTTCAGACAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGTTCAATTCAACAAGAAGACCTAACTATCCTAAATATATATGCACCCAACACAGGAGCACCCAGATTCATAAAGCAAGTTCTTAGAGACCTACAAAGAGACTTAGATAACCACACAATAATAGTGGGAGACTTCAACACCCCACTGACAGTATTAGACAGATCATTGAGGCAGAAAACTAACAAAGATATTCAGGACCTGAACTCGACACTTGACCAAATGGACCTAACAGACATCTACAGAACTCTCCACCCAAAAACAACAGAATATACATTCTTCTCATCTGCACATGGCACATACTCTAAAATTAACCACACAATCGGCCATAAAACAATCCTCAGCAAATTCAAAAAAACTGAAATCATACCAACCACACTCTCAGACCACAGCACAATAAAAATAGAAATCAATACTAAGAAAATCGCTCAAAACCATACAATTACATGGAAATTAAACAACCTGCTCCTGAATGACTTTTGGGTAAACAATGAAATTAAGGCAGAAATCAAGAAATTCTTTGAAACTAATGAGAACAAAGATACAACATACCAGAATCTCTGGGACACAGCTAAAGCAGTGTTAAGAGGGAAGTTTATAGCACTAAACACCCACATCAAAAAGTTAGAAAGATCTCAAATTAACAACCTAACATCACACCTAGAGGAACTAGAAAAACAAGAGCAAACCAACCCCAAAGCTAGCAGAAGACAAGAAATAACCAAAATCAGAGCTGAACTGAAGGAAATTGAGATGCAAAAAACCATACAAAAGATCAATGAATCCAGGAGTTGGTTTTTTGAAAGAATAAATAAGATTGATAGACCACTAGCTAGACTAATAAAGAAAAAAAGAGAGAAGATCCAAATAAACACAATCAGAAATGACAAAGGGGACATTACCACTGACCCCACAGAAATACAAAAAACCCTCAGAGACTACTATGAACACCTCTATGCACACAAACTAGAAAACCTAGAAGAAATGGATAAATTCCTGGAAACATACAACCTCCCAAGATTGAACCAGGAAGAAATTGAATCCCTGAACAGACCAATAATGAGTTCTAAAATTGAATCAGTAATAAAAAGCCTACCAACCAGAAAAAGCCCAGGACCAGATGGATTCACAGCTAAATTCTACCAGATGTATAAAGAAGAGCTGGTACCATTCCTACTGAAACTATTCCAAAAAATTGAGGAGGAGGGACTCCTCCCTAACTCATTCTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGACACAACAAAAAAAGAAAACTTCAGGCCAATATCCTTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACCGAATCCAGCAGCACATCAAAAAGCTAATCCACCACGATCAAGTAGGCTTTATCCCTGGGATGCAAGGTTGGTTCAACATATGCAAATCAATAAATGTGATTCATCACATAAACAGAACTAAAAACAAAAACCACATGATCATCTCAATAGATGCAGAAAAGGCTTTTAATAAAATTCAACATCCCTTCATGTTAAAAACCCTCAACAAACTAGGCATTGAAGGAACATACTTCAAAATAATAAGAGCCATCTATGACAAACCCACAGCCAACATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCCTTGAGAACCAGAACAAGACAAGGATGCCCACTCTCACCACTCCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGGCAAGAGAAAGAAATAAAAGGCATCCAAATAGGAAGAGAGGAAGTCAAACTATCTCTGTTTGCAGATGATATGATTCTATACCTAGAAAACCCCATAGTCTCTGCCCAAAAGCTCCTAGATCTGATAAACAACTTCAGCAAAGTTTCAGGATACAAAATCAATGTACAAAAATCAGTAGCATTTCTATACACCAACAACATCCAAGCTGAGAGCCAAATCAAGAATACAATCCCATTCACAATAGCCACAAAAAGAATAAAATACCTAGGAATACAGCTAACCAGGGAGGTGAAAGATCTCTACAATGAGAATTACAAAACACTGCTCAAAGAAATCAGAGATGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATTGTTAAAATGGCCATACTGCCCAAAGCAATTTACAGATTCAATGCTATTCCTATCAAACTACCAATGACATTCTTCACAGAATTAGAAAAAAACTATTTTAAAATTCATATGGAACCAAAAAAGAGCCTAAATAGCCAAGGCAATCCTAAGCAAAAAAACAAAGCTGGAGGCATCACATTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGACACATAGACCAATGGAACAGAATAGAGAGCCCAGAAATAAAGCCACACACCTACAACCATCTGATCTTTGACAAAGTTGACAAAAACAAGCAATGGGGAAAGGACTCCCTATTCAATAAATGGTGCTGGGATAACTGGCTAGCCATATGCAGAAGATTGAAACTGGACCCCTTCCTTACACCATATACAAAAATCAACTCAAGATGGATTAAAGACTTAAATGTAAAACCTAAAACTATAAAAACCCTGGAAGATAACCTAGGAAATACCATTCTGGACATAGGCCCTGGCAAAGATTTCATGATGAAGATGCCAAAAGCAATTGCAACAAAAACAAAAATTGACAAATGGGACCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCAACAGAGTAAACAGACAACCTACAGAATGGGAGAAAATATTTGCAAACTATGCATCTGACAAAGGTCTAATATCCAGAATCTATAAGGAACTTAAACAAATTAACAAGCAAAAAACAAACAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTTTCAAAAGAAGACATACATGTGGCCAACAAGCATATGAAAAAATGCTCAACATCACTAATCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAATAACAGATGCTGGCGAGGTTGTAGAGAAAAGGGAATGCTTATACACTGCTGGTGGGAATGTAAATTAGTTCAGCCATTGTGGAAAGCAGTTTGGGAATTTCTCAAAGAACTAAAAACAGAACTACCATTTGACCCAGCAATCCCATTATTGGGTATATACCCAAAGGAATATAAATCATTCTACCATAAAGACACATGCATGCGTATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCTAAATGCCCATCAATGGTAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGATCATGTCCTTTGCAGCAACATGGATGGAGCTGGAGGCCATTATCCTAAGTGAACTAACGCAGGAACAGAAAACCAAATACTGCATGTTCTCACTTATAAGTGGGAGCCTAAACATTGAGTACACATGGACACAAAGAAGGGAACAACAGACACCGGGGCCTACTTGAGGGTGGAGGGTGGGAGAGGGTGAGGATCGAAAAACTACCTATCGGGTACTATGCTTATTACCTGGGTGAAATAATCTGTACACCAAACCCCCGTGACATGCAATTTACCTATATAACAAACCTGCACATGTACCCCTGAACCTAAAATAAAAGTTAAAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA15.ORF1.hs6_sqmonkey.pars,L1PA15.ORF2.hs3_orang.marg,1703,2708,2781,6605,6829,224
L1PREC2,AAGATGGCTGACTAGACGCAGCCAGGAGGAACATCTCCCACCGACGGGACATCGGGAAGACTGGCGCACTCCTAGCAGATCTTCAGAGGGAAGGCATTGAGAGTGGATGGAGGGAAGACACAGATGGCTGAAGGGGGAGGAAGCTGGGAACCCTGCATGGGGCTACCGCGCACCAGGACTCGTTCCTGGCCCCCAGTGACTCCTGCGGAAGGGGTGAGTTGAACAGGCAAGGAGCAACCTGCTCTCACCATGGGCCTCTGGAATCCCGGCAGGAGGAGACCCCTTGACCACCATGGACACTTGAGTTGGCAGGGAGAGCTGCTTAGAGAAGTGGTAGGGGCAGAACTCCAGCCGGTGCAGAGCCCAGAGGGTTTGGTGTGGGAGCATCTGTAGTGGAGCATGGCCAGGGATGCCCATCCCCCTAGGCTCAACTTGCTCCCATAGGAGACTTTAGCCCTAGGGGAACTGTCGGACCTGAACTCTGCAGGGCGGTCTTGCCCATGAGACGGGGCCAGTCTGACCTGAGCACCCCTTAGTCTGCTGGCCTCTCCTGGGGCCCCAGCCTGGCCATGCCTGCTTGCAGTGCAGCCCCCAGGTACCTCCTGGGGGCCCGCATCATAGCTCCTGCGCTGGTGGACTGTGCCTGACTGGCAGAGTGCTCCAGCAGAGTGGCCACCCTTGCCACTCCGCAGCCTCCCCTGCCCACGCCCTCCCTCCCCTGCAGCCTCCCCTGTGCCACTTTGCCTGCATGCACCCACCCACGGCCACCCCCCACATCGCTTTGCCGGCGCATGTGTGCACGGGCGGACCTTGCCTTCCCTTCCCTGCCAGCGCGTGTGTGCACATGCACCCTGCCATGCCACTGCTGCTGGCGTGAGTCCCCTCCCCCCCTCCCCCCCCCCCTGCCATTGTCGTTGGAGCATTGGCGGGCATGGAGCCCGCCAGCCCTGCCCCCACCAGCGCCCTGCCCCTGCGCCAACACTGCCACCAGCGTGAAACTAGGCATGGAGAACAGCGGACCTGCCCCCACCCTGAGCGGCCACCGCCACCCGCGTGAACGTGCACAGAGGGTACACACAGTCCTGTGCCCACCAGCACCCTGCCCCCATGCTAACACCACCACCAGTGAACATGCACACACAGTTGCTGGCAGGGGCCCCCCCCCCCCCCCCCCGAGCCATGCTGCCACCGCCGCTGCTGTGAATGCCTGCACGGAGGCCGGCACCCTAGCACCTACTAGCACCCTGCCGCAGCTAATGAGTGTGCACCCCGCCATGCTGCTGCTGCTGCTGCTGCTGGCATGTGTGAACGAGGATGGATCCCGCTGCCACTGCCCTATGAAGTGCTTTGGCTGGCACCACCCATTGGAGTGTTGTGACCAGCGGTCTGGGAGCACCTTGGCCCCTCCAGTGCAGCAGGTTCCTAACCTTGAGGAGCCAGAGAACAAAGCCAGGGCCCAATACCAGTCCCCCAGAGTTAGAGCATGCAGTCCAGGAGTCCTGAGCTGAGCCTTGGCCCCCTAAAATCTTCAGAAATGAAGCCAGTTGACTGAACCCACCTTATACCACAATCAAACCCCCAAGGTCATCAAATAGGATAAAAGAAAAAAAAACCATCCAAAGGACAGCAACTTCAAAGATTGAAGGAACATCAGCCCACAAAGAAACTCTTGACAACTCAAAAAGCCAGAGTGTCTTCTTTCCTCCAAATGACCACACTAGTTCTCCAGCAAGGGTTCTTAACCAGGCTGAGATGGCTGAAATGACAGAAATAGAATTCAGAATATGGATAGGAATGAAGATCATCAAGATTCAGGAGAATGTTGAAACCCAATCTAAGGAAGCTAAGAATCACAATAAAATGATACAGGAGCTGACAGACAAAATAGCCAGTATAGAAAAGAATGTAACTAACCTGATAGAGCTGAAAAACACACTACAAGAATTTCATAATGCAATCACAAGTATTAACAGCAGAATAGACCAAGCTGAGGAAAGAATCTCAGAGCTTGAAGACTGGCTTTCTGAAATAAGACAGTCAGACAAGAATAAAGAAAAAAGAATAAAAAGGAACAAACAAAACCTCCAAGAAATATGGGATTATGTAAAGAGACCAAATCTATGACTCATTGGCATCCCTGAAAGAGATGGGGAGAATGGAAGCAACTTGGAAAACATATTTCAGGATATCATCCATGAGAACTTCCCCAACCTAGCTAGAGAGGCCAACATTCAAATTCAGGAAATGCAGAGAACCCCCACAAGATACTTCACAAGAAGATCATCCCCAAGACACATAATCATCAGATTCTCCAAGGTTGAAATGAAAGAAAAAATGTTAAAGGCAGCTAGAGAGAAAGGACAGGTCACCTACAAAGGGAAGCCCATCAGACTAACAGTAGACCTCTCAGCAGAAACCCTACAAGCCAGAAGAGATTGGGGGCCTATATTCAACATTCTTAAAGAAAAGAAATTCCAACCAAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTAAAGGAGAAATAAGATCCTTTTCAGACAAGCAAATGCTGAGGGAATTTGTTACCACCAGACCTGCCTTACAAGAGCTCCTGAAAGAAGCACTAAATATGGAAAGGAAAGACCATTACCAGCCACTACAAAAACACACTTTAAGTACACAGACCAGTGACACTATAAAGCAACCACACAAACAAGTCTGCATAATAACCAGCTAACAACATGTGACAGGATCAAATCCACACATATCAATACTAACCTTGAATGTAAATGGGCTAAATGCCCCAATTAAAAGGCACAGAGTGGCAAGCTGGATAAAAAAGCAAGACCCAATGGTATGCTGTCTTCAAGAGACCCATCTCACATGCAATGACACCCATAGGCTCAAAATAAAGGGATGGAGAAAAATCTACCAAGCAAATGGAAAACAGAAAAAAGCAGGGGTTGCAATCCTAATTTCAGACAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGTTCAATTCAACAAGAAGACCTAACTATCCTAAATATATATGCACCCAACACAGGAGCACCCAGATTCATAAAGCAAGTTCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAGTGGGAGACTTCAACACTCCACTGACAGTATTAGACAGATCATTGAGGCAGAAAATTAACAAAGATATTCAGGACCTGAACTCAACATTGGACCAAATGGATCTGATAGACCTCTACAGAACTCTCCACCCCAAAACAACAGAATATACATTCTTCTCATTGCCACATGGCACATACTCTAAAATCGACCACACAATTGGACATAAAACAATCCTCAGCAAATGCAAAAGAACTGAAATCATACCAAACACACTCTCAGACCACAGCACAATAAAAATAGAAATCAAGACTAAGAAAATCACTCAAAACCATACAATTACATGGAAATTAAACAACCTGCTCCTGAATGACTTTTGGGTAAATAATGAAATTAAGGCAGAAATCAAGAAGTTCTTTGAAACTAATGAGAACAAAGATACAACATACCAGAATCTCTGGGACACAGCTAAGGCAGTGTTAAGAGGGAAATTTATAGCACTAAATGCCCACATCAAAAAGTTAGAAAGATCTCAAATTAACAACCTAACATCACAACTAAAAGAACTAGAGAAGCAAGAGCAAACCAACCCCAAAGCTAGCAGAAGACAAGAAATAACCAAAATCAGAGCTGAACTGAAGGAGATTGAGACACAAAAAACCATTCAAAAATTAAAAAAACCAAGGAGTTGTTTTTTTGAAAAAATTAATAAGATAGATAGGCCACTAGCTAGACTAATAAAGAAGAAAAGAGAGAAGATCCAAATAAACACAATTAGAAATGACAAAGGGGATGTTACCACTGACCCCACAGAAATACAAATAACCATCAGAGACTACTATGAACACCTCTATGCACACAAACTAGAAAACCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTGAACCAGGAAGAAATTGAATCCCTGAACAGACCAATAATGAGCTCTGAAATTGAATCAGTAATAAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGATGGATTCACAGCCAAATTCTACCAGATGTACAAAGAAGAGCTGGTACCATTCCTACTGAAACTATTCCAAAAAATTGAGGAGGAGGGACTCCTCCCCAACTCATTCTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGACACAACAAAAAAAGAAAACTTCAGGCCAATATCCTTGATGAACATTGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATCCAGCAGCACATCAAAAAGCTAATCCACCATGATCAAGTAGGCTTTATCCCTGGGATGCAAGGTTGGTTCAACATATGCAAATCAATAAATGTGATTCATCACATAAACAGAACTAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCTTTCAATAAAATTCAACATCCCTTCATGTTAAAAACTCTCAATAAACTAGGTATTGAAGGAACATACCTCAAAATAATAAGAGCCATCTATGACAAACCCACAGCCAACATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCCTTGAAAACTGGCACAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTCCTGGCCAGAGCAATCAGGCAAGAGAAAGAAATAAAGGGCATCCAAATAGGAAGAGAGGAAGTCAAACTATCCCTGTTTGCAGATGACATGATTCTATATCTAGAAAACCCCATAGTCTCAGCCCAAAAGCTCCTTCAGCTGATAAACAACTTCAGCAAAGTTTCAGGATACAAAATCAATGTACAAAAATCACTAGCATTCCTATACACCAACAACAGCCAAGCCGAGAGCCAAATCAGGAATGCAATCCCATTCACAATTGCCACAAAAAGAATAAAATACCTAGGAATACAGCTAACCAGGGAGGTGAAAGATCTCTACAATGAGAATTACAAAACACTGCTCAAAGAAATCAGAGATGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATCATTAAAATGGCCATACTGCCCAAAGCAATTTACAGATTCAATGCTATTCCTATCAAACTACCAATGACATTCTTCACAGAACTAGAAAAAACTATTTTAAAATTCATATGGAACCAAAAAAGAGCCCAAATAGCCAAGGCAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACATTACCTGACTTCAAACTATACTACAGGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGACACATAGACCAATGGAACAGAATAGAGAGCCCAGAAATAAGGCCACACACCTACAACCATCTGATCTTTGACAAAGCTGACAAAAACAAGCAATGGGGAAAGGACTCCCTATTCAATAAATGGTGCTGGGATAACTGGCTAGCCATATGCAGAAGATTGAAACTGGACCCCTTCCTTACACCATATACAAAAATCAACTCAAGATGGATTAAAGACTTAAATGTAAAACCCAAAACTATAAAAACCCTGGAAGACAACCTAGGCAATACCATTCTGGACATAGGAACTGGCAAAGATTTCATGACGAAGACGCCAAAAGCAATTGCAACAAAAGCAAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCAACAGAGTAAACAGACAACCTACAGAATGGGAGAAAATATTTGCAAACTATGCATCTGACAAAGGTCTAATATCCAGCATCTATAAGGAACTTAAACAAATTTACAAAAACAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTTTCAAAAGAAGACATACATGTGGCCAACAAGCATATGAAAAAAAGCTCAATATCACTGATCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAATAACAGATGCTGGCGAGGTTGTGGAGAAAAAGGACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAAGCAGTGTGGCAATTCCTCAAAGAGCTAAAAACAGAACTACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGAATATAAATTATTCTACCATAAAGACACATGCACGTGTATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCTAAATGCCCATCAATGGTAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGATCATGTCCTTTGCAGGAACATGGATGGAGCTGGAGGCCATTATCCTTAGCAAACTAACGCAGGAACAGAAAACCAAATACCACATGTTCTCACTTATAAGTGGGAGCCTAAATGATGAGAACACATGGACACAAAGAGGGGAACAACAGACACTGGGGCCTACCTGAGGGTGGAGGGTGGGAGGAGGGAGAGGAGCAGAAAAAAATAACTATTGGGTACTAGGCTTAGTACCTGGGTGACGAAATAATCTGTACAACAAACCCCCATGACACGAGTTTACCTATATAACAAACCTGCACATGTACCCCTGAACCTAAAATAAAAGTTTA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PREC2.ORF1.hs5_gmonkey.pars,L1PREC2.ORF2.hs4_gibbon.pars,1663,2655,2728,6534,6756,222
L1PA12,GGGGGCCAAGATGGCTGACTAGAAGCAGCTATGGTGTGTGGCTCTCACGGAGAGGAATGAAAGGGGTGAGTAAATACAGCACCTTCAACTGAAACATCCAGGTACTCGCATTGGGACTGATCAGGGAAACAGCTTGACCCACGGAGAATGGAGAAAAGCAGGGCAGGGCAATGGCCCACCTGGGAGTAACATGGAGCCAAGGGAACCCCCATCCCCAGCCCAGGGAAGCGGTGAGTGAATGTGTGACCCTGGGAAACCACGCTTCTCCCATGGATCTTTGCAACCCTTGGATCAGGAGATCCCCTTGTGAACCCACTCCACCAGGGCCTTCGGTCTGACACACAGAGCTGTGTGGAGTCTCGGCAGAGCAGCTGCTCAGGCATGCACAGAGACCCAGGAGCTTTACATACTCGGGCTCTGGGATCCCCGGCAAAGGTGACTGCAACTCAGGCAAGGCGGGAGGTTGGACCTCCGTACATACCCCTAGGAAGGGGGCTGAATCCAGGGGGCTGAGCAGTGTCAGTCTGTGGGCCCCACTTCCATGGCACCTCACAGGATAAGACCCACTGGCTTGGAATTCCAGCCAGCCACCGGCAACAGTGTTGTACCTACCTGGGAATGGGACGGAGCTCCTGGGGGGAGGGGCGGGCTGCCATCTTTGCTGTTTGGATAACTCAGCCATTCCAGCCTGTGGGCTTTGGAGAGTCCAAACCAACTGGGGATGGAAGGGATCCCCCAGCACAGCACAGCTGCTCTACCAAAATGTGGCCAGACTGCTTCTTTAAGCAGGACCCTAAATCCATTTCTCCTCACTGGGCGGGACCTCCCAACTGGGGCCTCCAGCCACCCCGCCGATATCCTCCGGCTGGCAGAGTTTTGATTTCTCCCTGGGATGGAGTGCCTGGGGGGAGGGGCGGGCCACCATCTTTGCTGTTTGGACAACTTAGCCATTCCAGCCTGTGGGCTTTGGAGAGTCCAAACCGACTGGGGCAGAAGTGGTCCCCCAGCACAGCACAGCTGCTCTACCAAAGCATGGCCAGACTGCTTCTTTAAGTGGTCCCTGAACCATTCCTCCTCACTGGGTGGGACTTCCCAACCGGGGCCTCCAGCCACTCCCGCCAATGTTCTCTGGCTGACAGAGATTTGAAATCTCCCTGGGACAGAGCTCCTAGAGGGAGGGGTGGGCTGCCATCTTTGCTGTTTGGGCAACTTAGCTGTTCCAGCCTTCAGGCTTTGGAGAGCCCAAGCTGACCAGGGGCAGAAGCGGTACCCCAGCACAGCACAGCTGCTCTACGAAAATGTGGCCAGACTGCTTCTTTAAGTGGGTCCCTGATCCCATTCCTCCTGACTGGGTGGGACCTCCCAACTGGGGTCTCCAGCCACCTCCTACAGGTGCGTTTGGGCCGGCAACAGGTCTGTACCCCCCTGGGACGGAGCTCCCAGAGGAAGGGGCAGGCTGCCATCTTTGCTGTTTCACAGCCTTCACTGGTGATACCTCCAGGTACTGGAAAATCTAAGGTGACTAGGGTCTGGAGTGGACCCCCAGCAAACTGCAGCAGCCCTATAGAAAAGTGGCCAGACTGTTAAATGGGTGCCCATTCCCATATCTCCTCACTGGGCAGGTCCTCCAGGCCTGGGCCTCCAGCCACCCCCCGCCAGAGCTATCGAGCCAGTAGCAGCTCTGCAACTCCCTGGACAGAGCCCCCAGGGGCAACTGAAAGCCTCTCTGCCACTGCCTCTGCAGTGGAACTGCCCTTGCTACCCTCAGATTAATAGAGGAGCAAAGACCCTAAGTGCCTTATCCACACCTCCAACAAGCTGCAGTTGACCCAAGGAGAGGAGGCCAGTCTGTCTCCCATGGGTCCCACCCACCCCCCACTGCTCATCACCAGACAGGGAACCCCTGGCTTGGGCCCACAGCACAGACCCTCCATCCTGGGCTGATTGCACTGAGCGATTGCTGACCTGCATCTCTCTGGGGTGGAGCCCCCCGGAGAAAGGCAAAAGCCACTTGGCCACAACCACTACTAAGGTCCCTTCCTCTTCTGCCTCCAATATGGTGAAGAAAAATAAACAAACAAAGATCACCCCAGAGCTGCAGTGGGCAGCCCAGGAGTGCCAAGCCATGATCTACAGCCAGCACTCAAGGGGGAGAGGAACCCACACTTTCAGAGCATTGAAAGTGAACACAGCTGCAACTACAAGGAAACACACGGGAGCCACACAACCGAGCAAGAGTCTACCAACTGACCAACACACAAAAACCCCATCCAAAGGTCAGCAACCTCAAAGATTGAAGGTAGATAAGCCCACAAAGTGAGAAAGAACCAATGTAAGAACTCCGGTAACTCAAATGGCCAGAGTGTCATATGTCCTCCAAATGACCGCACCAGTTCTCCAACAAGAGTTCTTAACCAGGCTGAACTGGCTGGAATGACAGAAATAGAATTCAGAATATGGATAGAAACAAAGATCATTGAGATTCAGGAGGACGGCAAAACCCAATCCAAGGAAAATAAGAATCACAATAAAGTGATACAGGAGCTGAAGGACAAAATAGCCAGTATAAAAAAGAACCTAATGGGTCTGACAGAGCTGAATAACACAATACAAGAATTTCACAATGCAATCACAAGTATTAACAGCAGAATAAACCAAGCTGAGGAAAGAATCTCAGAACTTGAAGACTGGTTCTCTGAAATAAGACAGTCAGACAAAAATAAAGAAAAAAGAATAAAAAGAAATGAACAAAACCTCCAAGAAGTATGGGATTATGTAAAGAGGCCAAATCTACAAATCATTGGCATCCCTGAAAGGGAGGGGGAGAAAGCAAACAACTTGGAAAACATATTTCAGGATATCATCCATGAAAACTTCCCCAACCTTGCTAGAGAGGCCAACAGTCAAATTCAGAAAATACAGAGAACTCCTGCAAGATTCTACACAAGAAGATCATCCCCAAGACACATAATCATCAGATTTTCCAAGGTCAAAATGAAAGAAAGAATGTTAAAGGCAGCCAGAGAGAAAGGGCAGGTCACCTACAAAGGGAACCCCATCAGGCTAACAGCAGACCTCTCAGCTGAAACCCTACAAGCCAGAAGAGATTGGGGGCCTATATTCAACTTTCTAAAGAAAAAAAAACTTCAACCAAGAATTTCATATCCAGCCAAACTAAGCTTCCTAAGTGAAGGAGAAATAAGATCCTTTTCAGATAAGCAAATGTTGAGGGACTTCATTACCACCAGACCTGCCTTACAAGAAATCTTGAAAGAAGCAACACAGACCAGTGACACTATAAAGCAACCACATAAACAAGTCTGCAAAATAACCAGCTAGCATCATGTGACAGGATCAAATCCACACATAACAATACTAACCTTAAATGTAAATGGGCTAAATGCCCCAATTAAAAGACACAGAGTGGCAAGCTGGATAAAGAACCAAGACCCATTGGTATGCTGTCTTCAAGAGACCCATCTCACATGCAAAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAAATTTACCAAGCAAATGGAAAACAGAAAAAAGCAAGGGTTGCAATCCTAGTTTCTAACAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGTTCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAACACAGGAGCACCCAGATTCATAAAGCAAGTTCTTAGAGACCTTCAAAGAGACTTAGACTCCCACACAATAATAGTGGGAGACTTTAACACCCCACTGACAATATTAGACAGATCATTGAGACAGAAAATTAACAAAGATATTCAGGACCTGAACTCAGCTCTGGATCAAATGGACCTGATAGATATCTACAGAACTCTCCACCCAAAAACAACAGAATATACATTCTTCTCATTGCCACATGGCACTTACTCTAAAATTGATCACATAATCGGAAGTAAAACACTCCTCAGCAAATGCAAAAGAACTGAAATCATAACAAACAGTCTCTCAGACCACAGCACAATCAAATTAGAACTCAAGACTAAGAAATTCACTCAAAACCATACAATTACATGGAAATTGAATAACCTGCTCCTGAATGACTTTTGGGTAAATAATGAAATTAAGGCAGAAATCAAGAAGTTCTTTGAAACTAATGAGAACAAAGATACAACATACCAGAATCTCTGGGACACAGCTAAGGCAGTGTTAAGAGGGAAATTTATAGCACTAAATGCCCACATCAAAAAGCTAGAAAGATCTCAAGTTAACAACCTAACATCACAACTAAAAGAACTAGAGAACCAAGAGCAAACAAATCCCAAAGCTAGCAGAAGACAAGAAATAACCAAAATCAGAGCTGAACTGAAGGAGATAGAGACACAAAAAACCATTCAAAAGATCAACAAATCCAGGAGCTGGTTTTTTGAAAAAAATAATAAAATAGATAGACCACTAGCTAGACTAATAAAGAAGAAAAGAGAGAAGATTCAAATAAACACAATCAGAAATGATAAGGGGGATATTACCACTGACCCCACAGAAATACAAACAACCATCAGAGAATATTATAAACACCTCTATGCACATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACACATACACCCTCCCAAGACTGAACCAGGAAGAAATTGAATCCCTGAACAGACCAATAACGAGTTCTGAAATTGAGGCAGTAATAAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGACGGATTCACAGCTGAATTCTACCAGATGTACAAAGAAGAGCTGGTACCATTCCTACTGAAACTATTCCAAAAAATTGAAAAGGAGGGACTCCTCCCTAACTCATTCTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGATACAACAAAAAAAGAAAACTTCAGGCCAATATCCTTGATGAACATTGATGCAAAAATCCTCAACAAAATACTGGCAAACCAAATCCAGGAGCAAAATAAAAAGCTTTTCTACCATGAACAAGTAGGCTTTCATCCCCAGGATGCAAGGTTGGTTAAACATATGCAAATAAATAAATGTGATATTCATCACATAAACAGAACTAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCTTTCGATAAAATTCAACATCCCTTCATGTTAAAAACTCTCAATAAACTAGGTATTGAAGGAACATACCTCAAAATAATAAGAGCCATATATGACAAACCCACAGCCAACATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCCTTGAAAACCGGCACAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGAGCAATCAGGCAAGAGAAAGAAATAAAGGACATTCAAATAGGAAGAGAGGAAGTCAAACTATCTCTGTTTGCAGATGACATGATCCTATATCTAGAAAACCCCATCGTCTCAGCCCAAAAGCTTCTTAAGCTGATAAACAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATTACTAGCATTCCTATACACCAACAACAGTCAAGCCGAGAGCCAAATCATGAATGAACTCCCATTCACAATTGCCACAAAAAGAATAAAATACCTAGGAATAAAACTAACAAGGGAAGTTGAAAAGCTCTTCAAAAAGAAGAACTACAAACCACTGCTCAAAGAAATCAGAGATGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATCATTAAAATGGCCATATTGCCCAAAGCAATTTATAGATTCAATGCTATTCCCATTAAACTACCACTGACATTCTTCACAGGACTAGAAAAAACTATTTTAAAATTCATATGGAACCAAAAAAGACAAATAGCCAAGGCAATCCTCAGCAAGAACAAAGCTGGAGGCATCATGCTACCTAACTTCAAACTATACTACAGGGCTACAGTAACCAAAACAGCATGGTACTGGTAAAAACAGATACATAGACATAAATGGAAGAAAAAAGAGACCAGAGAAATAAGACCACACACCTACAACTATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTCAATAAATGGTGCTGGGATAACTGGCTAGCCATATGCAGAAAATTGAAACTGGACCCCCTTATAACACAAACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAAACCTAAAACCATAAAAACCCTAGAAGAACACCTAGGCAATACCCTTCAGGACATAGGCATGGGCAAAGATTTCATGAAAAAAACACCAAAAGCAATTGCAACAAAAGCAAAAATTGACAAAGGGGTTATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCAACAGAGTAAACAGACAACCTACAGAATGGGAGAAAATTTTTGCAAACTATGCATCTGACAAAGGTCTAATATCCAGCATCTATAAGGAACTTAAACAAATTTACAAGAAAAAAACAAACAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATACACGTGGCCAACAAACATATGAAAAAAAGCTCAACATCACTGATCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAACATCAGATGCTGGACAGGTTGTGGGGAAAATGGAAAGCTTAAACACTGTTGGTGGGAGTTTAAAGTGGTTGTACCAATTAGTTCAACCATTGTGGAAGACAGTGTGGTGATATTTCTAAGAGATCTAAAAACAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAGGAATATAAATTATTCTATTATAAAGACACATGCACGCATATGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATGAGATCATGTCCTTTGCAGGGACATGGATGGAGCTGGAGGCCATTATCCTTAGCAAACTAACACAGGAACAGAAAACCAAATACCGCATGTTCTCACTTATAAGTGGGAGCCTAAATGATGAGAACACATGGACACATAGAGGGGAACAACACACACTGGGGCCTATCGGAGGGTGGAGGGTGGGAGGAGGGAGAGGATCAGGAAAAATAACTAATGGATACTAGGCTTAATACCTGGGTGATGAAATAATCTGTACAACAAACCCCCATGACACACGTTTACCTATGTAACAAACCTGCACATCCTGCACATGTACCCCTGAACTTAAAATAAAAGTTA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA12.ORF1.hs6_sqmonkey.marg,L1PA12.ORF2.hs0_human.marg,2317,3279,3346,7179,7408,229
L1PA16,TTTTTTTTCCAAGATGGCGGATTAGAGGCTTTTAGCATGCCTCAGCCACTTGGAAATAGCAAGATAGTGCATAAAGATCAACTCTGTGAGCTTTAATTCAAGAAGGAAAATGGGAATCCACTGGAATCATGAAGGACACCCCAGATCCCCTTCCGGGGAGGAGAACACCAGCAAACAGCCCCCGTGACAGCGTCTGGCTGATAAAAGTGAGTGAAGCCCCAGTACATGAGAGAGGCAGAGAGCCTCCCTCTGTGACTCACCTTTCCACTGGGGATCTAAGCAACCCAGGCCAAGGGAGAGCACTTTGTTTCTCCCAAGCCCTGGAGCTAACTTGGGGAGAGGCTTGGAGACGCTGTGAGGGAAAGACACCGGGAAAAGCTGCAGGCATTTTCCCAGACCTGGGACTGGGAGCAGGACGCCATTTTTAATCCGGGCGCATACAAAGTCAGCCATTCTTTGGTGACCCGGCAGTGTGGCCATGCAGGCATTTTAGTCTTGGGCCAGAGATTGGAGCGCCTGCTCTGGAGCAGGGTAGGGGCCTCCACAGCCAGAACTGTGGAAAGCACCTCAGCAGTAGGTGCTGGAATTGTGCTCTCCCCCATTGCAGGCCTGGGGCAGGAGGAGAGCTGCTACAGCTGCAGTTTCTCCTGGGTGGTGAGACTTGCAGCCAGGGCCAGCTTGGCGACCTGGAACTGGTCTGCATGTGCCATTGCTGGGTGCCCCAGCCTGCTCCCCTGAGATCGTGGTGCAGTGGGGCCCTCTCTGCTCCATGCCCAGGCAGATCTCCAGGCATTTGGAGCACCCACTTGCCTGGATCAGCAGCCTGAGCTGCCCCACCCTTCCTGTGCAGAGATCTGTGTTCCGTCGGGGCCTCTCTGCTCCCCGCCCAGGCAGATCTCCAGGCATTCAGAGCACCCGCTTACCTGGTTCAGCAGCCTGAGCCACCCCACCCTTCCTGGACATAGATTGTGGTGCAGCAAGGCCTCTCTGCTCCATGCCCAGGCAGATCTCCAGGCATTTGGAGCACCTGCTTGCCTGGATCAGCAGCCTGAGCCGCCCCACCCTTCCTGTGCAGAGATTCTGGTGCAGGGGGGCCCTCTCTGCTCCATGCCCAGGCAGATCTCCAGGCATTCAGAGCACCTGCTTGCCTGGTTCAGCAGCCTGAGTTGCCCCACCCCTCCTGTGCAGAGATTTTGGTGCAGGGGGGCCCTACCCTCTCTGCTCCATGCCCAGGCAGATCTCCAGGCATCTGGAGCACCCACTCTCCTGGATTAGGAGTTTAGGCTGCCCCCCCTCCCGTGCAGAGAACTTGGGGCGAGGAGGTTTCCCAGCCATGCCTAGGCACACCTCTGGGTGCTTGGTGGCCGCCCACTGGATTCTCCCTCGGCGCTGGTGCTTGTGCCTGCCATCAGGGGACCTGTAGGTGGGCCTGCCTGGTCTGGCCCTGCCCATCTTGGCTCCCGCCCCCCAGGGCCCCGGGGCTGAGCAGGGAGCTCAGACCACTGTGCACTCCATGAATCAGCCCATTGCCTGAGGCAACAGAGAGCTTCTCCCAGTAAACAAGGATCAAGTATATACCCAGCCATGTTGGCTGCAGCTATTACCTATAAGTGCCATCTACTGGCTTGTAGGTCAAACTGCACAGCCCAATATAAAACCTGCCAAAAGAAGTGCATAGGGCTATAGAAGCAAAGCCAAAAGACCCTACCCAGCATTCTCTACAGTCACACCCCCTAGGGAGGGGGGAAAAGGAAAAAGGAAAAAAAAAAGAAAATATTATAGGAAAAAAAAAAAAAAAAAAAAAAGAAAAAATCCTACCCGCATGAAAATAATTACAAAAATTAGAAGTGCCAGCGTCTCCAGTGAGAAAGAACCAGCACAAGAACTCTGGCAACTCTAAAAGCCAGAGTGTCTTCTTACCTCCAAATGACCACACTAGCTCTCCAGCAATGGTTCTTAACCAGACTGAAATGGCTGAAATGACAGACATAGAATTCAGAATCTGGATGGCAAGGAAGCTCATTGAGATACAGGAGAAGGTTGAAACCCAATCCAAGGAAACCAGTAAAATAATCCAAGAGTTGAAAGACAAAATAGCCATTTTAAGAAAGAACCAAACTGAACTTCTGGAATTGAAAAATTCACTACAAGAATTTCATAATACAATTGGAAGTATTAACAACAGAATAGACCAAGCTGAGGAAAGAATCTCAGAGCTTGAAGACCAGTTCTTTGAATCAACTCAGTCAGACAAAAATAAAGAAAAAAGAATTTTAAAAAATGAACAAAACCTCTGAGAAATATGGGATTATGTAAAGAGACCAAACCTATGACTCATTGGGACATTCCTGAGAGAGAAGGAGAGAGAGTAAGCAACTTGGAAAACATATTTGAGGATATAGTCCATGAAAATTTCCCCAATCTCGCTAGAGAGGTTGACATGCAAATTCAAGAAATTCAGAGAACCCCTGCGAGATACTATACAAGATGACCATCCCCAAGACACATAGTCATCAGATTCACCAAGGTCAATGCAAAAGAAAAAATCTTAAAGGCAGCTAGAGAGAAGGGTCAGGTCACTTACAAAGGGAACCCCATCAGGCTAGCAGTAGACCTCTCAGCAGAAACCTTACAAGCCAGAAGAGATTGGGGGCCTATTTTCAGCATCCTTAAAGAAAAGAAATTCCAACCAAGAATTTCATATCCTGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTTCAGACAAGCAAATGCTAAGGGAATTTATTACCACTAGACCAGCCTTACAAGAGGTCCTTAAGGGAGTGCTAAACATGGAAATGAAAGAACAATACCTGCCACCACAAAAACACACTTTAAGTACATAGCCCACAGACCCTATAAAGCAACCACACAATAGAAACTACAAAGCAACCAGCTAACAACTTCACGATACAAAACCTCACATATCAATATTAACCTTGAATGTAAATGGTCTAAATGCCCCACTTAAAAGGCACAGAGTGGCAAGTTGGATAAAAAAACAAGACCCATCTATCTGCTGTCTTCAAGAGACCCATCTCACATGTAATGACACCCATAGGCTCAAAGTAAAGGGTTGGAGAAAGATCTATCATGCAAATGGAAAACAAAAAAGAGCAGGGGTCACTATTCTTATATCAGATAAAACAGACTTTAAACCAACAACAGTAAAAAAGGACAAAGAAGGGCATTACATAATGATAAAGGGTTCAATTCAACAAGAAGACTTAACTATCCTAAATATATATGCACCCAACATTGGAGCACCCAGATTCATAAAACAAGTACTTCTAGACCTACGAAAAGACTTAGACAGCCACACAATAATAGTGGGGGACTTCAACACCCCACTGACAGCATTAGACAGATCATTGAGGCAGAAAACTAACAAAGAAATTCTGGACTTAAATTCGACACTTGACCAATTGGACCTAATAGACATCTACAGAATACTCCACCCATCAACCACAGAATATACATTCTTCTCATCTGCACACAGAACATACTCTAAGATTGACCACATGCTCAGCCATAAAGCAAGTCTCAATAAATTCAAAAAAATTAAAATCATACCAACCATACTCTTGGACCACAGTGGAATAAAAATAGAAATCAATACCAAGAAGATCTCTCAAAACCACACAATTACATGGAAATTAAACAACTTGCTCCTGAATGACTTTTGGGTAAACAATAAAATTAAGGCAGAAATCAAAAAATTCTTTGAAATAAATGAAAACAGAGACACAACATACCAAAATCTCTGGGATGCAGCAAAAGCAGTGTTAAGAGGAAAGTTTATAGCACTAAATGCCTACATCAAAAAGTTAGAAAGATCTCAAATTAACAATCTAACATCACACCTAGAGGAACTAGAAAAACAAGAACAAACTAACCCCAAAGCTAGCAGAAGAAAAGAAATAACTAAAATCAGAGCAGAACTGAATGAAATTGAGACCCAAAAATCCATACAAAGAATCAATAAAACCAAAAGTTGGTTCTTTGAAAGGATAAACAAGATTGATAGACCACTAGCTAGATTAACAAAGAAAAAAAGAGAGATCCAAATAAGCACAATCAGAAATGACAAAGGTGACATTACAACTGATCCCACAGAAATACAAAAGATCCTCAGAGACTATTATGAACACCTCTATGCACACAAACTAGAAAATCTAGAGGAAATGGATAAATTCCTGGAAACACACAACCTCCCAAGATTGAATCAGGAAGAAATTGAAACCCTGAACAGACCAATATTAAGTTCTGAAATTGAATCAGTAATAAAAAACCTACCAACCAAAAAAAGCCCTGGACCAGATGGATTCACAGCCAAATTCTACCAGATATACAAAGAAGAGCTGGTACCAATTCTACTGAAACTATTCCAAAAAATTGAGGAGGAGGGACTCCTCCCTAACTCATTCTATGAAGCCAGCATCACCCTGATACCAAAACCTGGCAAAGACACAATGAAAAAAGAAAACTACAGGCCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATCCAGCAGCACATCAAAAAGTTAATTCACCATGATCAAGTAGGCTTTATTCCTGGGATGCAAGGTTGGTTCAACATATGCAAATCAATAAATGTGATTCACCACATAAACAGAATTAAAAACAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCTTTTGATAAAATCCAACATCCCTTCATGATAAAAACCCTCAACAAACTAGGCATCAAAGGAACATACCTCAAAATAATAAGAGCCATCTATGACAAACCCACAGCCAACATCATACTGAATGGGCAAAAGCTGGAAGCATTCCCCTTGAGAACTGGAACAAGACAAGGATGCCCACTCTCACCACTCCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGGCAAGAGAAAGAAATAAAAGGCATCCAAATAGGAAAAGAAGAAGTCAAACTATCTCTCTTCACTGATGATATGATTCTATACCTAGAAAACCCTAAAGACTCTGCCAAAAGGCTCCTAGAACTGATAAACAACTTCAGTAAAGTTTCAGGATACAAAATCAATGTACAAAAATCAGTAGCATTTCTATACACCAATAACATTCAAGCTGAGAGCCAAATCAAGAATGCAATCCCATTTACAATAGCCACAAAAAAAATAAAATACCTAGGAATACATCTAACCAAGGAGGTGAAAGATCTCTACAAGGAGAACTACAAAACACTGCTGAAAGAAATCATAGATGACACAAACAAATGGAAAAACATTCCATGCTCATGGATTGGAAGAATCAATATTGTTAAAATGGCCATACTGCCCAAAGCAATCTACAGATTCAATGCTATTCCTATCAAACTACCAATGTCATTTTTCACAGAATTAGAAAAAACTATTCTAAAATTCATATGGAACCAAAAAAGAGCCCAAATAGCCAAAGCAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACATTACCTGACTTCAAACTATACTATAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACAAAAACAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAAGCCACACACCTACAACCATCTGATCTTTGACAAAGTTGACAAAAATAAGCAATGGGGAAAGGACTCCCTATTCAATAAATGGTGCTGGGATAACTGGCTAGCCATATGCAGAAGAATGAAACTGGACCCCTACCTTTCACCATATACAAAAATTAACTCAAGATGGATTAAAGATTTAAATGTAAGACCTCAAACTATAAGAATCCTAGAAGAAAACCTAGGAAATACCATTCTGGACATTGGCCTTGGGAAAGAATTTATGACTAAGTCCTCAAAAGCAATTGCAACAAAAACAAAAATTGACAAGTGGGACCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCAACAGAGTAAACAGACAACCTACAGAATGGGAGAAAATATTCACAAACTATGCATCTGACAAAGGTCTAATATCCAGAATCTATAAGGAACTTCAATTCAACAAGCAAAAAACAAATAACCCCATTAAAAAGTGGGCAAAAGACATGAACAGACACTTCTCAAAAGAAGACATACAAGTGGCCAACAAACATATGAAAAAATGCTCAACATCACTAATCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAACAACAGATGTTGGGGAGGCTGTGGAGAAAAGGGAATGCTTATACACTGTTGGTGGGAATGTAAATTAGTTCAGCCACTGTGGAAAGCAGTTTGGAGATTTCTCAAAGAACTTAAAACAGAACTACCATTTGACCCAGCAATCCCATTACTGGGTATATACCCAAAAGAAAATAAATCATTCTACCAAAAAGACACATGCACTCATATGTTCATCACAGCACTATTCACAATAGCAAAGACATGGAATCAACCTAGGTGCCCATCAATGGTGGATTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTATGCAGCCATAAAAAAGAATAAAATCATGTCCTTTGCAGCAACATGGATGCAGCTGGAGGCCATTATCCTAAGCAAATTAATGCAGGAACAGAAAACCAAATACCACATGTTCTCACTTATAAGTGGGCTAAACATTGGGTACTCATGGACATAAAGATGGCAACAATAGACACTGGGGACTACTAGAGGGGGGAGGGAGGGAGGGGGGCAGGGTTGAAAAACTATTGGGTACTATGCTCACTACCTGGGTGATGGGATCATTTGTACCCCAAACCTCAGCATCATGCAATATACCCATGTAACAAACCTGCACATGTACCCCTGAATCTAAAATAAAAGTTGAAATAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA16.ORF1.hs6_sqmonkey.pars,L1PA16.ORF2.hs5_gmonkey.pars,1863,2866,2945,6751,6974,223
L1PA17,TTTTTTTCCAAGATGGCTGACTAGGGACATCAGATGCTCGCCATTCTCTGAAAGGGGATCTAAGTTATCGGTTAAAGTACCAGTTTTGGATGGTAAACTGTGGGAAGAGAGCCAGGAGATGGCGGCGTGCCCATGGGAAAAACCTGGGGTGTAGAAAGGGAAAGCTGAGAGAGCTTGGCGGAGACACACTGCGTTGGGCCCCGGAGGCGCCCAGAGACCCTACTGAAGGGAAGAGTGCGGGGGGGATCCTCGCTGCTCCGCATTCCGCCCCCGCCCCCCGCCTATGGCTCAACTGGTAGTGCGCACCTCTGCCCACCTAACCCAGGGTAGCATTGTTGGTGGCGATTGGGGAACTTGCCGAGAAAACAGGAACCGGTTGCCTGGTCTTGCGGGCAGGATGTGGCTCGCTCCTCGCCTCCCGCGTCCGGCGTTGTCCTGTGTGCTGCGCAGCAGTAGTTCCTAGGGGGTGCATCTCTCCTGCACGGCGGTACTCCCCCCTTGAGACACCGCACGACCATAGCCCCCGTAAACATACCTCACAACTTGCTCTCACTTTGGCGACCTCAGGGTGCCTGCGGGACCCTGGGGGCCCGCTGTGCGGACTAGGAGGGTGGGAGTCTCCGGTCCCCTGGAGATCTAACCCTCGGTGTGGACTGCCCCTAAGGGAGGGGGGGGTGCAGCCCCCCAAAGCCCCCCTTGGGTCAAAGGAAATGTGGGTGTGGCGCCAGCCGCTGAAGGGGGCACCACCAAAGCCTGGGAATGGACATGGAGAGGGGGTGGGGGGTTCTCCCCTTCCCCCCCCCCCCCCTCCTCAGTGCACTGTTGCGGATTCGGCAGTGGCTCTTCCCACTGGGGCCTGGTGAGCGTGGGCTGGAAAAGGCTGCTTCTCAGGCTTCTCCAGTGGCTCCACCCCCGCTGAAGGTGAATACGAGCTGGCGGGGGCCTTTTTCCTGGTTTCTGCTTTGCCCCCCCCCCCTACACAGAGTCACAGCACCAGGGCCCTGGCAAGAAAGGGCGGACATGCCCCGGAGTTGCCTGCCCTCGACAGGGGGAAGCTGCTCTGCCCTCCACCCATTTTGCTGGTGGCCCCCAGGGGGGACTATCCACTGCCCACGGCCTACCGCCAGCCTGGGGCCGGGAACCAAGGGCCAGAAGCCATGTGACTTGAAGGACATGCGCGCCCCGTGACAGGGGTGTGATAGGGAAGTGGATTGCCCTCTTGCTGGCTCAGGATGAGGAGCTGGTGCACCCCCCCCCCCCATTCCCCCCAAACCTTCCCCCCTGCCTTTCCCCTCCCCTGCCTCCCTTCTGCTCCTCTCCCCCCCCCATCGAGAGCAGAATTTGCAGGTTTCATCTGCCTACGACCCTATCTGCTGGCTCTTACTCTTAAGTGCCATCTACTGGACTGCAGCCTGAATTACACCACCAAACAAAAATACATTGCTACAACAAGCAATATCTGAGAAAGCCACTGCATGAACCTATCTGCAACCAGGAACCCGTACAGAGCCTTGGCCCTCTGAAAGCACCCAGAAATGAAGCCAATCGATTATACACAACATACACCACAGTCATACCCTCAAGGGAAAAAAGAATAAAAAATCAAAAAGCCCCATCCAAATGATAGCAAATTCAAAAAAAAAAAAAAAAAAAAAAAGAAGCATCAGCTCCCTCAGTAAGAACTCAGGCAATACAAAAAGCCAGAGTGTTTAAACACCTCCAAAGGATCCCACTAGCTCCCTAGCAATGGATCCTAACCAGAATGAAATGTCTGAAATGACAGATATAGAATTCAGAATATGGATGGCAAGGAAACTCAATGAGATCCAAGAGAAAGTTGAAATCCAATACAAAGAAACCAGAAAAATAATCCAAGATTTGAAAGATAACATAGCTATATTAAGAAAGAACCAAACAGAACTTCTGGAAATGAAAAATTCACTAAAGGAATTTCAAAATACAGTTGGAAGCTTTAACAATAGACTAGACCAAGCAGAAGAAAGAATTTCAGAGCTTGAAGACTAGTCTTTCAAATTAACCCAGTCAAAAAATAAAGAAAAAAGAATTTTAAAAAATGAACAAAGCCTTTGAGAAATATGGGATTATGTAAAGTGACCAAACCTATGACTTATTGGCATTCCTGAGAGAGAAGAAAAAGTAAGCAACTTGGAAAACATATTTGAGGGAATAATTCAGGAAAATTTCCCTAATCTTGCTAGAGAGGTAGACATCCAGATACAAGAAATTCAGAGAACACCTGCAAGATACTATACAAGATGACCATCCCCAAGGCACATAGTCATCAGACTATCCAAGGTCAATGTAAAAGAAAAAATCTTAAAGGCAGCTAGAGAAAAGGGTCAAATTACCTATAAAGGAAATCCCATCAGACTAACAGCAGACTTCTCAGCAGAAACCTTACAAGCCAGAAGAGATTGGGGGTCTATTTTTAGCCTTCTTAAAAAAAAAAAATGCCAGCCAAGAATTTTATATCCTGCCAAACTAAGCTTCATAAATGAAGGAGAAATAAAGTCTTTCCCAGACAAGCAAATGCTAAGGGAATTTATCACCACCAGACCAGCCCTACAAGAAATGCTCAAAGGAGTTCTAAACATGGAAATGAAAGAAAAATACATTCTCCCACAAAAACACAATGAAAGAATGATACTGCTACCACAAAAGCACACATAAGTACATAGCCCACAGACCCTATAAAGCAACTACACAATTGAGACTACAAAGCAACTAGCTAACAACACTTGACAGGAACAAAACCTCACATATCAATATTAACCTTGAATGTAAATGGCCTAAATGCTCCACTTAAAAGACATAGAGTGGCAAATTGGATTAAAAAACAAGACCCAACCTTCTGCTGCCTTCAAGAGACCCATCTCACATGTAATGACACCCATAGGCTCAAAGTAAAGGGATGGAGAAAGATCTATCATGCAAATGGAAAACAAAAAAGAGCAGGGGTTGCTATTCTTGTATCAGATAAAACAGACTTTAAACCAACAACAGTAAAAAAAGACAAAGAAGGGCATTATATAATGATTAAAGGTTCAATAAGACAAGAAGATTTAACTATCCTAAATATATATGCACCCAACATTGGAGCACCCAGATTTATAAAACAAATACTACTAGACCTTAGAAAAGAGATAGATAGCCATACAATAATAGTGGGGGACTTCAACACCCCACTGACAGCACTAGACAGATCATTGAGGCAGAAAACTAACAAAGAAACTCTGGACTTAAATTGGACTCTTGACCAAATGGACCTAATAGACATCTACAGAATACTCCACCCAACAACCACAGAATATACATTCTTCTCATCTGCACATGGAACATTCTCTAAAATTGACCACATGCTTGGTCATAAAGCAAGTCTCAATAAATTCAAAAAAATTGAAATCATATCAAGCATCTTCTCAGACCACAGTGGAATAAAATTAGAAATCAATACCAAGAGGAACTCTCAAAACCACACAAATACATGGAAACTAAACAACTTGCTCCTGAATGACTTTTGGGTAAACAATAAAATTAAGGCAGAAATCAAAAAATTTTTTGAAACAAATGAAAATAGAGACACAACATACCAAAACCTCTGGGATACAGCAAAAGCAGTGTTAAGAGGAAAGTTTATAGCACTAAATGCCTACATCAAAAAGATAGAAAGATCTCAAATTAACAACCTAACATCACACCTAAAGGAACTAGAAAAACAAGAAACTAAACCCAAAGCTAGCAGAAGAAAAGAAATAACTAAGATCAGAGCAGAACTAAATGAAATTGAGACCAAAAAAACAATACAAAGGATCAATGAAATAAAAAGTTGGTTCTTTGAAAGGATAAACAAGATTGATAGACTACTAGCTAGATTAACCAAGAAAAAAAGAGAGAAGATTCAAATAAGCACAATCAGAAATGACAAAGGTGACATTACAACTGATCCCACAGAAATACAAAAGATCCTCAGAGACTACTATGAACATCTCTATGCACACAAACTAGAAAATCTAGAGGAAATGGATAAATTCCTGGAAACACACAACCTCCCAAGATTGAACCAGGAAGAAATTGAAATCCTGAACAGACCAATAACGAGTTATGAAATTGAATCAGTAATAAAAAACCTACCAACCAAAAAAAGCCCTGGACCAGATGGATTCACAGCCAAATTCTACCAGATGTACAAAGAAGAGCTGGTACCAATCCTACTGAAACTATTCCAAAAAATTGAGGAGGAGGGATTCCTCCCTAACTCATTCTATGAAACCAGTATCATCCTGATACCAAAATCTGGCAAAGACACAACAAAAAAAGAAAACTACAGGCCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATCCAGCAGCACATCAAAAAGATAATTCACCATGATCAAGTGGGCTTTATTCCTGGGATGCAAGGATGGTTCAACATATGCAAATCAATAAATGTGATTCACCACATAAACAGAATTAAAAACAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCATTTGATAAAATCCAACATCCCTTCATGATAAAAACCCTCAACAAACTAGGCATCAAAGGAACATACCTCAAAATAATAAGAGCCATCTATGACAAACCCACAGCCAACATCATACTGAATGGGCAAAAGTTGGAAGCATTCCCCCTAAGAACTGGAACAAGACAAGGATGTCCACTCTCACCACTCCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGGCAAGAGAAAGAAATAAAAGGCATCCAAATAGGAAAAGAGGAAGTCAAATTATCTCTCTTCACTGATGATATGATTCTATACCTAGAAAACCCTAAAGATTCCGCCAAAAGACTCCTAGACCTGATAAACGACTTCAGTAAAGTTTCAGGATACAAAATCAATGTACAAAAATCAGTAGCATTTCTATACACCAATAACATTCAAGCTGAGAACCAAATCAAGAACTCAATCCCATTTACAATAGCCACAAAAAAAATAAAATACCTAGGAATACATCTAACCAAGGAGGTGAAAGATCTCTACAAGGAGAACTACAAAACACTGCTGAAAGAAATCATAGATGACACAAACAAATGGAAAAACATTCCATGCTCATGGATTGGAAGAATCAATATCATTAAAATGACCATACTGCCCAAAGCAATCTACAGATTCAATGCAATTCCTATCAAATTACCAATGTCATTTTTCACAGAATTAGAAAAAAACAATTCTAAAATTCATATGAAACAAAAAAAAGCCCAAATAGCCAAAGCAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACATTACCTGACTTCAAACTATACTACAAGGCTATAGTAACCAAAACAGCATGGTACTGGTACAAAAATAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAAGCCACACACCTACAACCAACTGATCTTCGACAAAGTCAACAAAAATAAACAATGGGGAAAGGACACCCTATTCAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGCAGAAGAATGAAACTGGACCCCTACCTCTCACCATATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAGACCTCAAACTATAAAAATCCTAGAAGAAAACCTAGGAAATACTCTTCTGGACATTGGCCTAGGCAAAGAATTTATGACTAAGTCCTCAAAAGCAAATGCAACAAAAACAAAAATTGACAATTGGGACCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCAACAGAGTAAACAGACAACCTACAGAATGGGAGAAAATATTTGCAAACTATGCATCCAACAAAGGACTAATATCCAGAATCTATAAGGAACTTAAACAAATCAACAAGAAAAAAAAAAAAAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATACAAGCAGCCAACAAACATATGAAAAAATGCTCAACATCACTAATCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAATAACAGATGTTGGCAAGGATGTGGAGAAAAGGGAACACTTATACACTGTTGGTGGGAATGTAAATTAGTTCAGCCACTATGGAAAACAGTTTGGAGATTTCTCAAAGAACTAAAAATAGAACTACCATTTGACCCAGCAATCCCATTACTGGGTATCTACCCAAAGGAAAATAAATCATTCTACCAAAAAGACACCTGCACTCATATGTTTATCACAGCACTATTCACAATAGCAAAGACATGGAATCAACCTAGGTGCCCATCAATGGTGGATTGGATAAAGAAAATGTGGTACATATACACCATGGAATACTACACAGCCATAAAAAAGAATGAAATCATGTCCTTTGCAGCAACATGGATGCAGCTGGAGGCCATTATCCTAAGTGAATTAACGCAGAAACAGAAAACCAAATACCACATGTTCTCACTTATAAGTGGGAGCCTAACATTGGGTACACATGGACATAAAGATGGGAACAATAGACACTGGGGACTCCAAAAGGGGGGAGGGAGGGAGGGGGGCAAGGGTTGAAAAACTTCCTATTGGGTACTATGTTCACTATTTGGGTGATGGGATCAATAGAAGCCCAAACCTCAGCATCATGCAATATACCCATGTAACAAACCTGCACATGTACCCCCTGAATCTAAAATAAAAATGAAAATAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PA17.ORF1.hs2_gorilla.pars,L1PA17.ORF2.hs5_gmonkey.marg,1676,2652,2760,6581,6812,231
L1PB4,AAGCAGCTTTATGGATGATTGGTAGCGACAGACAGCTGCCTCCTCCTCAAAGAAGAAAAAAATTAGCAGGTAAATAATCACATTTTGAATAAACTTTTGAGAGAAGAGTGCGGGAGCCAACAAGAGAGCTCCCAGGAAAAACTGGGGGTAGGAAAGAAGAAGAAGGGGAGCCTGTTGGAGAGCAGCGACCGGGAATTGAGGAACCTGGTTTTCTATGGAAAAGGGTGGGGGGGGGTTTCTTGGTTCCCCACGTCCCTGTGGCAGACTGCTGGTTTCCGAGCTATTGGAGAGCTCCTCTGCCCTCACAGGCCTAAAGACTGGTGTGGGTAGCGATTGGGAGCTTGTTTGAGGGCACTGCTTGTACTTGCAGGCTGTCCAAGGCTATCTCGCCCTCCCCCCATACCCAGACTGGAGTGGCAGGCACAATACTGAGGTTGCATCCATTGGGGGCCTAAGTCCTGCCCGGGAAATCTAAGCCCTGATGTTTCAAAATACCCGATTCCTCGTAAACATTCCCCAGCATCTACTCAGACTGCGGCAGCCACAAAGGGCTGGCAGGATCCAAGGGAGCTGCAGGATTCCTGGTGGTCTAACCCTCAAGGCATGCTGCTCTTGGGGAAAGGGAGTAAACATTGACAGAATTGAAGGGATAAATACATATCAACACAGTAATAGTAGGAGATTTCAATAGCCCACTTTCAATAATGGATAGGACCACCAGATATAAGATAAGATCAATAAAGAAATAAAGGACTTCTCTTTTTTTTCCCCCAAGGCGGCAGATCAGAGACTCTTTTAGCATGCTTCACCTATTCAGAATCAAAAAAAAAAAAAAACAGAAACAGAAACAAAATAGTAAAAAATTACACAGGGTTCTGCAGCCTGCCATGAGGCGGGTACTGCCAGATGTCAGAACAGGGAGGGTGAGAAGGGGCAAGGTATTTACGCAAACCGACGACAACTGCCGCTGTCTTCTCCGCCATGGGCTGCGGGAAGAAGGTGCACTCTGACGATGTCCTGCGTGCCTGCGAACCTCTACCACAGGTGCCTAGTGGCACGTTCCAAGCGAATGCGCCTAGCGTTGCTGGTGGGAGAAAAACAGAGCGGACGTTCTTGCGTTCAGGGGGTTTCCTCCGTTGGTCCTGTGGTGGGTTTGCCCCCCTCCTGCATGGCTATGGTTTTCGCGCGGGGGTCTTGAGGGGAGGTTCGCGGTTCTGGTTCCGCGCCGCGGTGGCTCTGGCGCCCCGCCCTGGGATGGGAGTGGGGGATTTCTCCTCCGCCCGCCGGGGGGGGGGGCGCCCCCATTGGCCGTGCTGGGAGGAGGGTGGGGGGTGGGCTTGCTGGGTGGATTGGGAGGCTGGGCCCCCCCCCCTTCTGTGGGCCGGACTGGTCGGGGCTTGGCCTGGGGTCCCGGTTTCTCCCCCTGGGAGCGCGGGGCCTCAGCGGGGCCGGGATGGGGAGTTGGGGAGCTGCGGTTCTCCCTTTGTCCTGCTGTGGGAAGTATGGGTGGCCGGGGGCCGTCGGCGCTGCTCCCCCGGGGGGCGCGGGCTGCATAGCCGTCGGTCACTCCACCCTTTGTTGGTGGGCGTGTGTCCCTCTCTCACCGGGGGGCGGGTTCTGGCGCCGGAGGGATGTGGTCCCTACCTGCCTAGTCGTTTTGCTTCCCCGGGCTGGGGGGTTCTTGCGTTCTCCTTGGGCTTTGTGTTGGTCTGTGCGCACCGCAAGGCTGGAGCCAGCTCCCCCCCCCACAGGGGTGGTGGTTGCTCCGGTCGTGACGGGCTGCGGGCTGGGCGCGTGGCCCGGTCCGCCCCCCTCTCCCTTTTCCCCCCCTCCGGGGCTGAGTAGGGAGCTCAGGCCACTGGGCATTCCATAGCCCAGCCCATTGCCTGAGGCAACAGAGAGCTTCTCCTGGTAAACAAAGATCAAGCATATACCCATCTGCTTCCGCCGCAGCTGGCTCTTACCTGCAAGCACCACCTACTGGCCTGGAGGTTGAACTGCACAACCCAATAAAAATCCTGCTGACACAAGTGCACAGCGCTGGGGAATGAGATAAGCTTCCTGAGACCTCCACCCCCCCATCCCTGCAACCGCAGCCCCACAGGAGGCAGTGAGCCTGCTCACATGCCCAGTACATCGCTACTACAACCAGCATTTGAGAAAGCCACCACACTAAGGCTATCTATTAACCAAGGAATTCATACAGAGCCTTGGCCACTTGAAAGCACCCAGAACCAAAGCCAAATGACCCTACACAACATACATTACAGTCACATCCTCAAGGGGAAAAAAATCCCATCCAAATGAAAGTAAATTCAAAAATAAGAAGTGATAGCTTCTCCAGATGATAAGATGAGAAGGAACCAGTGTAAGAATTCTGGAAATATGAAAAAACAGGGTGTTATAACACCTCCAAAGGATCACACTAATTCTCCAGCAATAGATCCTAATCAAAAAGAAATGCTCAAAATGCCAGTTAAAGAATTCAAAATACTAATTATAAGGAAGCTCAATGAGATTCAAGAGAAAGTTGAAAACCAACACAAAGAAATCAGAAAAACAATTCAAGATATAAATAAGAAATTCACTAAAGAGATAAAAATTAAAAAAAAAACAGAACTTCTGGAAATGAAAAATTCACTGAAGGAATTACAAAATACAGTTGAAAGCTTTAACAATAGACTAGACCAAGCAGAAGAAAGAATTTCAGAGCTTGAAGACAGGTCTTTTGAATTAACCCAGTCAGACAAAAAAAAAAAAATATTAAAAAATAAAAAAAGCCTTTAAGAAATATGGGATTATGTAAAGCGACCAAACCTATGAGTTATAGGCATTCCTGAGGGAGAAGAAAAAGTAAAAAGTTTGGAAAACCTATTTGAGGGAATAATTCAGGAAAACTTCCCTGGTCTTGCTAGAGATTTAGACATCCAGATACAAGAAGCTCAGAGAACACCTGGAAGATACTTTGCAAGAAGAACCTCACCAAGGCATATAGTCATCAGACTATCCAAAGTCAATGTGAAGGAAAAAATCCTAAAAGCAGCAAGAGAGAAGCATCTAATCACCTATAAAGGAAATCCCATCAGACTAACAGCAGACTTCTCAGCAGAAACCTTACAAACCAGAAAAGAATGGGGGGCTATTTTTAACTTTCTTAAAAAAAAAAAATGCCAGCCAAGAATTTTATATCCTGCTAAACTAAGCTTCATAAATGAAGGAGAAATAAAGTCTTTCCCAGACAAGCAAATGCTAAGGGAATTTATCACCACTAGACCAGTCCTACAAGAAATGCTCAAAGGAGTTCTAAACATGGAATGACAGGAACAAAACCTCATATATCAATATTAACCTTGAATGTAAATGGATTAAATGCTCCACTTAAAAGATATAGATTGGCAGAATGGATTAAAAAACCAACCATATGCTGCTTACAAGAAACCCACCTAACTGGTAAAGACACTTACAGACTCAAAGTAAAGGGGTGGAAAAAAATATTCCATGCAAAAAGGAAACAAAAAATGAGCGGAGTAGCTATACTTATATCAGATAAAACAGACTTTAAATCAACAACAGTAAAAAAAAAAAAAGGTCATTATATAATGATAAAGGGATCAATTCAACAAGAAGATATAACAATCCTAAATATATATGCACCCAACACTAGAGCACCCAGATTCATAAAACAAATACTACTAGACCTAAAAAAAGAGATAGACAGCAATACAATAATAGTGGGGGACTTCAACACCCCACTGACAGCACTAGACAGATCATTGAGACAGAAAAACAAAGAAACACTGGACTTAAATTGGACTCTAGACCAAATGGACCTAACAGACATTTACAGAACATTCTACCCAACAACTGCAGAATATACATTCTTCTCATCTGCACATGGAACATTCTCCAAAATAGACCATATGTTAGGCCACAAAGCAAGTCTCAATAAATTTTTAAAAATCAAAATCATATCAAGTATCTTCTCAGACCACAGTGGAATAAAACTAGAAATCAATACCAAGAGGAACTCTCAAAACTATACAAATACATGGAAATTAAACAACATGCTCCTGAATGATCTTTGGGTCAATGATGAAATTAAGACAGAAATTAAAAAAATTTTTGAAATAAATGAAAATAGAGACACAACATACCAAAACCTCTGGGATACAGCAAAAGCAGTGCTAAGAGGGAAGTTTATAGCATTAAATGCCTACATCAAAAAGATAGAAAGATCTCAAATTAACAACCTAATGTTACACCTCAAGGAACTAGAAAAACAAGAACAAACCAAACCCAAAGCTAGCAGAAGAAAAGAAATAACAAAGATCAGAGCAGAACTAAATGAAATTGAGACCAAAAAAAAAATACAAAGGATCAATGAAATAAAAAGTTGGTTCTTTGAAAAGATAAACAAAATTGATAGACTACTAGCTAGATTAACCAAGAAAAGAGAGAAGATTCAAATAAGCACAATCAGAAATGAAAAAGGTGACATTACAACTGATACCACAGAAATACAAAAGATCATCAGAGACTACTATGAACATCTCTATGCTCACAAACTAGAAAACCTAGAGGAAATGGATAAATTCCTGGAAACATACAACCTCCCAAGATTGAACCAGGAAGAAATAGAAATCCTGAACAGACCAATAATGAGTAGTGAAATTGAATCAGTAATAAAAAATCTCCCAACAAAAAAAAGCCCAGGACCAGATGGATTCACAGCCAAATTCTACCAGACATACAAAGAAGAACTGGTACCAATCCTACTGAAACTATTCCAAAAAATTGAGGAGGAGGGAATCCTCCCTAACTCATTCTATGAAGCCAGTATCACCCTGATACCAAAGCCAGGCAAGGACACAACAAAAAAAGAAAACTACAGACCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATCCAACAGCACATCAAAAAGATAATACACCATGATCAAGTGGGTTTTATTCCAGGGATGCAAGGATGGTTCAACATATACAAATCAATAAATGTGATTCACCACATAAACAGAATTAAAAACAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCATTTGATAAAATTCAGCATCCCTTCATGATAAAAACCCTCAACAAACTAGGCATAGAAGGAACATACCTCAAAATAATAAAAGCCATATATGACAAACCCACAGCCAACATCATACTGAATGGGGAAAAGTTGAAAGCATTCCCCCTAAGAACTGGAACAAGACAAGGATGCCCACTTTCACCACTCCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGGCAAGAGAAAGAAATAAAAGGCATCCAAATTGGAAAAGAGGAAGTCAAATTATCTCTGTTCACTGATGATATGATCTTATACCTAGAAAACCCTAAAGACTCCTCCAAAAGACTCCTAGATTTGATAAATGACTTCAGTAAAGTTTCAGGATACAAAATCAATGTACAAAAATCAGTAGCATTTCTATACACCAATAATGATCAAGCTGAGAACCAAATCAAGAACTCAATCCCATTTACAATAGCTACAAAAAAAATAAAAGGAATACATTTAACCAAGGAGGTGAAAGATCTCTACAAGGAGAACTACAAAACACTGATGAAAGAAATCATAGATGACACAAACAAATGGAAAAACATCCCATGCTCATGGATTGGAAGAATCAATATTGTTAAAATGACCATACTGCCCAAAGCAATCTACAGATTCAATGCAATTCCTATCAAATTACCAATATCATTTTTCACAGAATTAGAAAAAAAAATCCTAAAATTTATATGGAACCAAAAAAGAGCCCAAATAGCCAAAGCAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACATTACCTGACTTCAAATTATACTACAAGGCTATAGTAACCAAAACAGCATGGTACTGGTATAAAAATAGACACATAGATCAATGGAACAGAATAGAGAACCCAGAAATAAAGCCACATACCTACAACCAACTGATCTTTGACAAAGTTAACAAAAACATACAATGGGGAAAGGACACCCTATTCAATAAATGGTGCTGGGAAAATTGGATAGCCATATGCAGAAGAATGAAACTGGACCCCTATCTCTCACCATATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAGACCTGAAACTATAAAAATCCTAGAAGAAAACCTAGGAAAAACTCTTCTGGACATTGGCCTAGGCAAAGAATTTATGACTAAGACCTCAAAAGCAAATGCAACAAAAACAAAAATAGACAAATGGGACTTAATTAAACTAAAAAGCTTCTGCACAGCAAAAGAAATCAACAAAGTGAACAGACAACCTACAGAATGGGAGAAAATATTTGCAAACTATGCATCTAACAAAGGACTAATATCCAGAATCTACAAGGAACTCAAACAACTCAACAAGAAAAAAAAAAACCCCATTAAAAAGTGGGCAAAGGACATGAACAGACATTTTTCAAAAGAAGACATACAAATGGCCAACAAACATATGAAAAAATGCTCAACATCACTAATCATCAGAGAAATGCAAATTAAAACCACAATGAGATACCATCTTACACCAGTCAGAATGGCTATTATTAAAAAGTCAAAAAACAACAAATGTTGGCAAGAAGGGGAGAAAAAGGAAATACTTATACACTGTTGGTGGGAATGTAAATTAGTACAACCTCTATGGAAAACAGTATGGAAATTTCTCAAAGAACTAAAAATAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCTACCCAAAGGAAAAGAAATCATTATATCAAAAAGATACCTGCACTCGTATGTTTATCACAGCACTATTCACAATAGCAAAGATATGGAATCAACCTAAGTGTCCATCAATGGATGATTGGATAAAGAAAATGTGGTATATATATACATACTATGCAGTCATAAAAAAGAATAAAATCATGTCTTTTGCAGCAACATGGATGGAACTGGAGGCCATTATCCTAAGTGAAATAACTCAGAAACAGAAAATCAAATACCACATGTTCTCACTTATAAGTGGGGTCAAATACCGCATGTTCTCACTTATAAGTGGGAGCTAAATAATGTGTACACATAGACATACAGAGTGGAATAATAGACACTGGAGACTCCGAAAGGTGGGAGGGTGGGAGGGGGGTGAGGGATGAGAAATTACCTATTGGGTACAATGTACACTATTCGGGTGATGGGTACACTAAAAGCCCAGACTTCACCACTATGCAATATATCCATGTAACAAAACTGCACTTGTACCCCCTAAATCTATAAAAATAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1PB4.ORF1.hs4_gibbon.marg,L1PB4.ORF2.hs5_gmonkey.marg,2353,3315,3315,7103,7358,255
L1MA4A,GGCTTCAAGATGGCTGACTAGAGGCATCTGGTACTCGCCTCCTCCACAAAGAAGAACCAAAATAGTGAGTAGATAATCACACTTCGAATAGATCATCTAAGAGAGAACACTGGAATTCAACAGAGAAGTGACAGGAAACACCTAAGGCAAGGAAGGAGAGGGAAGCGAGGCAGCCTGCTTGGCTGGGATTGGCTGGGAGCCTGGAGAGGCTCCCCAATGTGGGGAAAGGGTAAGTGAGAGACCCCCAGTGGTCCACATTCCCACTGTGGACTCCTGCAATCCTAGCCATGGGAGAGCCCCTCGACCCTCACAGGCCCTGAGACTAACATAGGGAGCTGCCTGGAGACTGTACGATGGCATTGCTCCAGAGAGGGAGCTCATGCTGGGTCCCACACACCCCCCGAGTCCTAAGCAGCTACAGCATGGCGCCATTTTGAGAGCCCAGCCCCCACCAGACTGCATCCTGCCCTGGGGCCCAACAGCCCCTGCATCTCCACATCCCTGGAGCCCCACTGACATTCCCTGCCCACAGCCACCGCCGCTGCTGGCTGCTGCTGCCAGGGCTGAAGCGCGAGCCATTGGCAGTGACCCCACCCCCCCCGGAGGCGGGGCTGCTGTGCATTTTCATGTGCCCTGAGGACAGGCTCCCCTACCTGCAGCTGCCACCGCTGTGGGCTGCCACGGCCGGGGCGAAAGCAGGGGTGCCAGGGGCTACCCCGGCCCAACCCAATGCCGGCTGCTGCTGGGCCAAAGTGTGAGCGAAGCGCATGCTCCCCAGCCACCTGCCTATGGCTGCTGCCACTGAAAGCAACCCCACCCTCCCCAGTAGCAGGGCTGCAGTGCAGCCACTGCTGCCCCCACCTGAGCATTCCGCCAGGGGCCTGGGGATCACCCTGCCCCTGCCTACCACAGCCAGTGCCTGCATGCACCACTGGGGGGCCTGAGGACAGGCCTGCCCGGCCCGGCTCCACCCCCCCAGTGCCTGAGCATGCCGTCTGGGGGCCTGGGGATCGCCCAGCCCAGTCCACCACCATTGGCACCTGAGCACTCCTCCCAGGGGCCTGAGGTTGGGCCCACCCAACCTGCTGCACCACAGCTGGCACCCACCTGCATGTGCCACCTGTGGGCCTGGGGACTGGCCTGCCCAGCCCATTGCAGCCACCGCCAACACCAGCGTGGACTGCTTGGGAGCCAGAGGGTTGTCCTGCCACTGCTACTGCCATTGCCCATGCCATGCCTGCTGCCCAGGGGCCCGAGAACCTGCCCACCTGCCTGGCCCACTGCTGCCACTGCTGGCACCTGAGCAAGCCACCTGGAGGCCCAAGAATCGGCCTGCCTGGACCCACTAACACCGGTGCCAGCGTACACCACCCTGGGGCCCAAGGACAGGCATGCTCAGCCCACCACTGCCACCACTGGGGCCCAAGGACTGGCCCACCTGGCATCCCCGTCCCCAGCAAAACTTCACCACAGCCTCCACTAACAACTGCACCCTAAGCCACTGAGGAAATCACAGACACCACTGATGCTGTTTACAGCCAAAGAAATCATACAGAGACTACACTACTGCATGCACCCAGAATCAAAGCCAAAGTGCCCTACCCAACCAACACCATAGATACATCTTCAGGAAAAAGTCTTCCCCTATGAAAGCAAATTCAAAAAATTGGAAGAAGTGACTGTTACACCAGACATAAATACCGCAGATATCAAAATAAGGACACAGGAAACACGAAAAAGCAAGGAAATATGACACCTCCAAAGGAACACAATAATTCTCCAGCAACAGATCCCAATCAAAAAGAAATTTATAAAATCCCAGAAAAAGAATTCAAAATAATGATATTAAAGAAGCTCAGTGAGATACAAGAGAAATCAAAAAAAAAAATAAAAAAAAATAAAAAAAAAACAATTCAGGATATGAATGAGAAATTTACCAAAGAGATAGATATCATAAAAAAGAACCAAACAGAAATTCTGGAACTGAAGAATTCATTGAATGAAATACAAAATACATTTGAAAGCTTCAACAATAGACTAGATCAAGCAGAAGAAAGAATTTCAGAACTTGAAGACAGGTCTTTTGAAATAACCCAGTCAGACAAAAATAAAGAAAAAAAAAAAAAAAAAAAAAAAAAGAATAAACAAAGCCTATGTGACATATGGGAACACCATAAAGTAACCAAATATTTAAATATTTTGGGTGTCCCAGAAGGCGAAGAGAAAACAAAAGGGTTAGAAAACCTATTTAATAAAATAATAGATGAAAACTTCCCAAGTCTAGCAAGAGATTTAGACATCCAGATACAGGAAGCTCAGAGATCCCCAAATAGATACAATTCAAAAAGGTCTTCTCCATGGCACATTATAGTCAAACTGTCAAAAGTCAAAGACAAAGAGAGAATTCTAAAAACAGCAAGAGAAAAGCATCTAGTCACCTATAAAGGAACCCCCATCAGACTAACAGCAGATTTCTCAGCAGAAACCTTACAGGCCAGGAGAGAATGGGATGATATATTCAAAGTGCTGAAAGAAAAAAACTGCCACCCAAGGATACTATATCCAGCAAAATTATCCTTCATAAATGAAGGAGAAATAAAGTCTTTCCCAGACAAGCAAAAGCTGAGGGAATTCATCACCACTAGACTAGCCCTACAAGAAATGCTTAAGGGAGTCCTAAACCTGGAAATAAAACCCACTGGTAGAGCAAACACACAAATAAGGAAGAGAAAGGACTCAAATGTTACCACTACAGAAAACCACCAAACCACAATGATAAACAATAAGAGAGAAAGAAAGGAACAAAGGATATACAAAACAACCAGAAATCAATTAATAAATGACAGGAATAAAACCTCACATATCAATAATAACCTTGAATGTAAATGGATTAAATTTTCCACTTAAAAGATATAGACTGGTTGAATGGATTAAAAAAATTATCCAAATATATGGTTGCTTAAAAGAAACTCACTTTACCTGTAAAGACACATATAGACTGAAAGTAAAGGGATGGAAAAAGATATTCCATGCAAATGGAAACCAAAAGCAAGCAGGAGTAGCTATACTTATATCAGATAAAACAGACTTTAAGTCAAAAACAGTAAAAAAAGACAAAGAAGGTCATTATATAATGATAAAGGGATCAATCCAGCAAGAGGATATAACAATTCTAAATATATATGCACCCAACACTGGAGCACCCAGATTCATAAAGCAAATATTACTAGATCTAAAGAGAGAGATAGACTCCAATACAATAATAGTGGGGGACTTCAACACCCCACTCTCAGCATTAGACAGATCATCTAGACAGAAAATCAACAAAGAAACATTGGATTTAAACTGGACTTTAGACCAAATGGACCTAACAGACATTTACAGAACATTTTATCCAACAACTGCAGAATACACATTCTTCTCATCAGCACATGGAACATTCTCCAGGATAGACCATATGTTAGGCCACAAAACAAGTCTCAACAAATTTTTAAAAATTAAAATCATATCAAGTATCTTCTCAGACCACAATGGAATAAAACTAGAAATCAATACCAAGAGGAACTTTGGAAACTATACAAATACATGGAAATTAAACAACATGCTCCTGAATGACCATTGGGTCAATGAAGAAATTAAGATGGAAATCAAAAAATTTTTTGAAACAAATGAAAATGAAAACAAAACATACAAAAACCTGTGGGATACAGCAAAAGCAGTGCTAAGAGGGAAGTTTATAGCAATAAATACCTACATCAAAAAAGTAGAAAGATTTCAAATAAACAATCTAACAATGCACCTCAAGGAACTAGAAAAGCAAGAACAAACCAAACCCAAAATTAGCAGAAGAAAAGAAATAATAAAGATCAGAGCAGAACTAAATAAAATAGAGACTAAAAAAAAAATAAAAAGGATCAATAAAATAAAAAGTTGGTTTTTTGAAAAGATAAACAAAATTGATAAACCACTAGCTAGACTAACCAAGAAAAAAAAAGAGAAGACCCAAATAAACAAAATCAGAAATGAAAAAGGAGACATTACAACTGATACCACAGAAATACAAAAGATCATCAGAGACTATTATGAACAACTATATGCTAACAAACTGGAAAACCTAGAGGAAATGGATAAATTCCTGGAAACATACAACCTACCAAGATTGAATCAGGAAGAAATAGAAAACCTGAACAGACCAATAATGAGTAGTAAGATTGAATCAGTAATAAAAAGTCTCCCAACAAAGAAAAGCCCAGGACTGGATGGATTCACTGCCAAATTCTACCAAACATATAAAGAAGAACTAATACCAATTCTTCTCAAATTATTCAAAAAAATTGAAGAGGAGGGAATTCTCCCTAACTCATTCTATGAGGCCAGCATTACCCTGATACCAAAACCAGACAAGGACACAACAAAAAAAGAAAACTACAGGCCAATATCCCTGATGAACATAGATACAAAAATCCTCAACAAAATACTAGCAAACCAAATTCAACAGCACATCAAAAAGATAATACACCATGATCAAGTGGGATTTATACCAGGGATGCAAGGATGGTTCAACATATACAAATCAATAAATGTGATACATCACATCAACAGAATGAAGGACAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCATTTGATAAAATTCAACATCCCTTCATGATAAAAACTCTCAACAAACTAGGCATAGAAGGAACATACCTCAAAATAATAAAGGCCATATATGACAAACCCACAGCTAACATCATACTGAATGGGGAAAAGTTGAAAGCCTTTCCTCTAAGAACTGGAACAAGACAAGGATGCCCACTTTCACCACTCCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGGCAAGAGAAAGAAATAAAAGGCATCCAAATTGGAAAAGAGGAAGTCAAATTGTCCCTCTTTGCAGATGACATGATCTTATATCTAGAAAAACCTAAAGACTCCACCAAAAAACTCTTAGATCTGATAAATAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGCATTTCTATACACCAATAATGAACTAGCTGAAAAAGAAATCAAGAAGGCAATCCCATTTACAATAGCTACAAAAAAAATAAAATACCTAGGAATAAATTTAACCAAGGAGGTGAAAGATCTCTACAAGGAAAACTACAAAACACTGATGAAAGAAATTGAAGAGGACACAAACAAATGGAAAGACATCCCATGCTCATGGATTAGAAGAATTAATATTGTTAAAATGACCATACTGCCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAAATACCAATATTATTTTTTACAGAAATAAAAAAAAAAATCCTAAAATTTATATGGAACCAAAAAAGAGCCCAAATAGCCAAAGCAATCCTGAGCAAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAAATATATTACAAGGCTATAGTAACCAAAACAGCATGGTATTGGTATAAAAATAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAATCCATATATTTACAGCCAACTGATTTTTGACAAAGGCACCAAGAACATACATTGGGGAAAGGACACCCTCTTCAATAAATGGGGCTGGGAAAAATGGATAACCATATGCAGAAGAATGAAACTAGACCCCTTATTTCCCCCATATACAAAAATCAACTCAAAATGGATTAAAGACTTAAATGTAAGACCCGAAACTATAAAACTACTAGAAGAAAACATAGGGAAAACACTTCAGGACATTGGTCTAGGCAAAGATTTTATGGCTAAGACCTCAAAAGCACAGGCAACAAAAACAAAAATAGACAAATGGGACTATATTAAACTAAAAAGCTTCTGCACAGCAAAAGAAACAATCAACAGAGTGAAGAGACAACCTGTTGAATGGGAGAAAATATTTGCAAACTATTCATCCAACAAGGGACTAATATCCAGAATATACAAGGAACTCAAACAACTCAACAAAAAAAAAACAATAAAAAAAAAAAAAAATAATCCCATTAAAAAGTGGGCAAAGGACATGAATAGACATTTCTCAAAAGAAGACATACAAATGGCCAACAGGTATATGAAAAAATGCTCAACATCACTAATCATCAGGGAAATGCAAATCAAAACCACAATGAGATATCATCTTACCCCAGTTAGAATGGCTATTATTAAAAAGACAAAAAAAAAAAAATATGTTGGTAAGGATGTGGAAAAAAGGAAACTCTTATACACTGTTGGTGGGAATGTAAATTTAATAAAACCAATAAGGAAAAAAATTTGGAAATTTCTTAAAAAACTAAAAATAGAACTACCATATAATCCAGCAATCCCACTACTGGGTATTTATCCAAAGGAAAAAAAATCAGTATATCAAAGGGATACCTGCACTCCCATGTTTATTGCAGCACTATTCACAATAGCAAAGATATGGAATCAACCTAAGTGTCCATCAATGGATGAATGGATAAAGAAAATGTGGTATATATACACAATGGAATACTATTTAGACATAAAAAAGAATGAAATCATGTCATTTGCAGCAACATGGATGGAACTGGAGGTCATTATGTTAAGTGAAATAAGCCAGGCACAGAAAGACAAATATCACATGTTCTCACTCATATGTGGGAGCCTAAAAAAGTTGATCTCATGGAGGTAGAGAGTAGAATGATAGATACCAGAGGCTGGGAAGGGTGTGTGGGGGGGGGGGGGGGGGGGGTGATGAAGAGAGGTTGGTTAATGGGTACAAACATACAGTTAGATAGAAGGAATAAGTTCTAATGTTTGATAGCAGAGTAGGGTGACTATAGTTAACAACAATGTATTGTATATTTCAAAATAGCTAGAAGAGAGGACTTGAAATGTTCCCAACACATAGAAATGATAAATACTTAGGGTGATGGATACCCTAAATACCCTGACTTGATCATTACACATTCTATGCATGTAACAAAATATCACATGTACCCCATAAATATGTACAAATATTATGTATCAATAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA4A.ORF1.hs4_gibbon.pars,L1MA4A.ORF2.hs2_gorilla.marg,1691,2688,2840,6682,7053,371
L1MA4,GTACCTCTATTTCCAAAATGGCAGCGTAGAAGCAATCTGGCTTCCCTTCCCACCATCATTGACCGCCCCCCCGCCCCCCCCAGGAAAGCAAAAACAGGTACACAGCGGCAACATTATCACCAGTGCTGCCCCAGAAGTCAAATCTGAGGCTGAGACAGTTCCTGGGGTCACAGGGAAGCGAAAAAACAAAACCAAATGACCTCTGAACTGGTCGTAAGTGACTCAGACTTCTATATCTCTGACGCCCCTTCCCCCTAATCTGGCTGTCAGCAAGCACATGGAAAATTTCCCCCCAACTCCCGGTTTCCCCCTTGAAAAAGGTGAGATTAAGGCGGACAACCAGCTTTCCCACCATCTTGGGGTCCTCGGCATGAGACCTGTCCCTGCCTCAACCCACGGGAAGCATCATGAGTGGCTCTAGGGAGAAATATTCCTGAGGACAGCCAGAGAAAAAGGGGGGGGGTGGGACTACCATCCCCAGCCCCGGAAACTCTGCTCTGTAACTTGGCCACTGGAGACGCCAAATCAGAGTGGCTGTTCAGCAGCACCACACTGTAGGACACTTGTTCCACAGGTCCCCTGGGCACGAACACCTAGCCAGCCTTCCCAAACTGCCCGGCTGTCCCCTTTGGATCCCCCACCATTCAGGATGGGCAGCGACTGATGGTTTACAAAATTATCACTCACATCAACAAGCTGCGCTACTGATGTTTGCCAGAGCCACGGCAAACCTGGGCTTAGGGTGCCATCTAGTGCTAAAAAGGAGGCACCGACCCCGCGGGAAAAAAACGCAAAAAAATCCACCCCGTATATTAGACACAATATCTATGGAAAGATATGCAAAAAACAGCACCACAAAAACCCATACTGAAAAGAGTGGAATAAATACCTAATCCTTCAATGCACAGATATTGATGTACATCCACAAGAATCAAGAAGAAACAGGGAAACATGACCTCCCCAAATGGACAAAACAAGGAACCAGTGACTGACCCTAATGAGATAAAGATATGTGAGCTCTCTGACAAAGAATTCAAAATAGCAGTTTTAAGGAAACTCAGTGAACTCCAAGATAACACAGAAAAGCAATTCAGAAATTTATCAGGGAAATTTAACAAAGAGGTTGAATAAAATTTAAAAAATCAAACAAAATCTTGGAACTGAGAAATACAATTACTGAACTGAAAAATTCATTAGAGGCTCTCAACAGCAGAATGGATCAAGCAGAGGAAAGAATCAGTGAGCTCAAAGACAGGCTATTTGAAAATACACAGTCAGAAAAACAAAAAAAAAAAAAAAAAAAAATAAAAAGAAATGAAAAAAACTTACAAGATATAGAAAATAACCTCAAAAGACCAAATCTAAGAATTATTGGTGTTCAAGAGGGAGTTGAGCAAGAGCAAAGGGTAGAAAGCTTATTCAAAGAAATAATAACAGAAAACTTTCCAAAACTTGAGAAAGATATAAATATCCAGGTACAGGAAGGTCAGAGAACACCAAACAGATTCAACCCAAATAAGACTACCCCAAGGCATATAATAATCAAACTCTCAAAGGTCAAGGACAAAGAGAGGATTCTAAAAACAGCAAGAGAAAAAAAGCAAATAACATATAAAGGAGCTCCAATTCATCTGGCAACAGACTTCTCAACAGAAACCATACAGGCCAGGAGAGAGTGGAATGACATATTTAAAGTGCTGAAAAAAAAAAACTGCCATCCAAGAATACTTTATCCAGCAAAGCTATCCTTCAAATATGAAGGAGAGATAAAGTCTTTCCCAGACAAACAAAAGCTGAGAGAATTCATCACCACCAGACCTGTCTTACAAGAAATGCTAAAGGGAGTTCTTCAATCTGAAAAAAAAAAAAAAGTAACAACCAAAAAGAAACTATATGAAGGTGACACTAATGTGCAACAAGAAAACATCTGAAGGTATAAAACTCACTGGTAAAAGTAAGTACATAGACAAGGAAAAAGCAAGAAAAATCAAGAATATTCTAATACTGTAATTGTGGTGTGTAAACCACTCATATCTTTAGTATGAAGACTAAAAGACAAATCTATCAAAAAAAAATAATAACTACAACAACTTGTTAAGAGATAGGCAATTATAAAAATATATAAATTGAGACAACAAAAAGTCAAAATGATGGTGAACGTGGGGGGGATGGAGTTAAAGTGTAGAGTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTCTTTGTTTCCATTCTAAATTTGTGATCAAAGATAAGTTGTCATCTCTTTAAAATAACTTGTTATAACTATAAAATTTTTTTTGTAAGCCTCATGGTAACCACAAAGCAAAAACCTATAATAGATACACTAAAAATAAAAACAAGGAATTAAAACATACTACCAGAGAAAATCACCTAACCACAAAGGAAGACAGTAAGAGAGGAAGAAAGGAAGAGAGGAGTTACAAAACAACCAGAAAACAAGTAACAAATGGCAGTAGTAAGTCCTTACTTATCAATAATAACATTGAATGTAAATGGACTAAATTCTCCAATTAAAAGACATAGAGTGGCTGAATGGATAAAAAAAAAAAACCAAATAATTTGTTCCTTAAAAAAAACCCCTTTCCCTTATAAGAAACCCAATAGAATGAAAATTAAGGGGTGGAAAAAAATATTTCATGCAAATGGAAAAAAAAGAGCAGGAGTAGCTATACTTATATCAGATAAAATAGACTTTAAGTCAAAAACTGTAAAAAGAGACAAAGAAGGTCATTATATAATGATAAAGGGGTCAATTCAGCAAGAGGATATAACAATTATAAATATATATGCACCCAACACTGGAGCACCCAAATATATAAAGCAAACATTAATAGATCTAAAGGGAGAGATAGACTGCAATACAATAATAGTAGGGGACTTCAACACCCCACTTTCAGTAATGGACAGATCATCCAGACAGAAAATCAACAAAGAAACATTGGAGTTAAACTACACACTAGACCAAATAGGCCTAACTGACATTTACAGAACATTTCATCCAACTGCTGCAGAATACACATTCTTCTCATCAGCACATGGAACATTCTCCAGGATAGACCATATGTTAGGCCACAAAACAAGTCTCAACAAATTTAAAAAAATAAAAATCATATCAAGTATCTTTTCTGACCACAATGGAATAAAACTAGAAATCAATAACAAGAGGAACTTTGGAAACTATACAAATACATGGAAATTAAACAACATGCTCCTGAATGACCAATGGATCAATAAAATAAAAAGAAAATTTAAAAATTTCTTGAAACAAATGAAAATGGAAACACAAAATACCAAAAACCTTAGGGAAAAAACAAAAGCAGTACTAAGAAGGAAGTTTATAGCAATAAATGCCTACATCAAAAAAGTAGAAAGACTTCAAATAAACAACCTAATGATGCACCTCAAGGAACTAGAAAAGCAAGAACAAACCAAACCCAAAATTAGTAGAAGAAAAGAAATAATAAAGATCAGAGCAGAAATAAATGAAATTGAGACTAAAAAAATAAAAAAAATCAATAAAATAAAAAGTTGGTTTTTTGAAAAGATAAACAAAATTAACAAACCTTTAGCTAGACTAACAAAAAAAAAAGAGAAGACCCAAATAAATAAAATCAGAAATGAAAAAGGAGACATTACAACTGATACCACAGAAATACAAAGGATCATTAGAGACTATTATGAACAACTATATGCCAACAAATTGGAAAACCTAGAAGAAATGGATAAATTCCTGGACACATACAACCTACCAAGATTGAACCATGAAGAAATAGAAAACCTGAACAGACCAATAATGAGTAATAAGATTGAAGCAGTAATAAAAAGTCTCCCATCAAAGAAAAGCCCAGGACCTGATGGCTTCACTGCTGAATTCTACCAAACATTTAAAGAAGAACTAATACCAATTCTACTCAAACTATTCAAAAAAATTGAAGAGGAGGGAATACTTCCAAACTCATTCTATGAGGCCAGCATTACCCTGATACCAAAACCAGACAAAGACACAACAAAAAAAAACTACAGGCCAATATCACTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACAAAATTCAACAACACATTAAAAAGATCATTCACCATGATCAAGTGGGATTCATCCCAGGGATGCAAGGATGGTTCAACATATGCAAATCAATAAATGTGATACATCACATTAACAGAATCAAGGACAAAAACCATATGATCATTTCAATAGATGCTGAAAAAGCATTTGATAAAATTCAACATCCCTTTATGATAAAAACTCTCAACAAACTGGGTATAGAAGGAACATACCTCAAAATAATAAAGGCCATATATGACAAACCCACAGCTAACATCATACTGAATGGGGAAAAATTGAAAGCCTTTCCTCTAAGATCTGGAACAAGACAAGGATGCCCACTTTCACCACTTTTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAGAGAAAGAAATAAAGGGCATCCAAATTGGAAAGGAAGAAGTCAAATTATCCTTGTTTGCAGATGACATGATCTTATATTTAGAAAAACCTAAAGACTCCACCAAAAAACTGTTAGAACTGATAAATAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGCATTTCTATATACCAACAGTAAACAATCTGAAAAAGAAATCAAGAAAGCAATCCCATTTACAATAGCTACAAAAAATATAAAATACCTAGGAATAAATTTAACCAAAGAAGTGAAAGATCTCTACAAGGAAAACTATAAAACACTGATGAAAGAAATTGAAGAGGACACAAAAAAAGGAAAAATTTTCCAATGTTCATGGATTGGAAGAATTAATATTGTTAAAATGTCAATACTACCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAAATACCAATGACATTCTTCACAGAAATAGAAAAAAAAAATCCTAAAATTTATATGAAACCACAAAAGACCCAAATAGCCAAAGCAATCCTGAGCAAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAAATATACTACAAAGCTATAGTAACCAAAACAGCATGGTACTGGCATAAAAACAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAATCCACACATTTACAGCCAACTCATTTTTGACAAAGGCGCCAAGAACATACATTGGGGAAAGGACAGTCTCTTCAATAAATGGTGCTGGGAAAACTGGATAACCAATTGCAGAAGAATGAAACTAGACCCCTATCTCTCACCATATACAAAAATCAAATCAAAATGGATTAAAGACTTAAATCTAAGACCTGAAACTATGAAACTACTAGAAGAAAACTTTGGGGAAACGCTCCAGGACATTGGTCTGGGCAAAGATTTTTTGGGTAAGACTTCAAAAGCACAGGCAACAAAAGCAAAAATAGACAAATGGGATTACATCAAGCTAAAAAGCTTCTGCACAGCAAAGGAAACAATCAACAAAGTGAAGAGACAACCTACAGAATGGGAGAAAATATTTGCAAACTATCCATCTGACAAGGGATTAATAACCAGAATATATAAGGAACTCAAACAACTCAATAGCAAAAAAAAAAATAATCTAATTATAAAATGGGCAAAAGATCTGAATAGACATTTCTCAAAAGAAGACATACAAATGGCCAACAGGTATATGAAAAAATGCTCAACATCACTAATCATCAGAGAAATGCAAATCAAAACCACAATGAGATATCATCTCACCCCAGTTAAAATGGCTTTTATCAAAAAGACAAAAAATATAACAAATGCTGGTGAGGATGTGGAGAAAGGAGAACTCTTATACACTGTTGGGAAAGTAAAAATTGGTACAGCCACTATGGAAAACAGTATGGAGGTTCCTCAAAAAATTAAAAATATAGAACTACCATATGATCCAGCAATCCCACTACTGGGTATATATCCAAAAAAAAGAAAAAAAATATATATAAAAGATATCTGCACTCCCATGTTTATTGCAGCACTATTCACAATAGCCAAGATATGGAATCAACCTAAGTGTCCATCAATGGATGAATGGATAAAGAAAATGTGGTATATATACACAATGGAATATTATTCAGCCATAAAAAAGAATGAAATCCTGTCATTTGCAGCAACATGGATGGAACTGGAGGTCATTATGTTAAGTGAAATAAGCCAGGCACAGAAAGACAAATATCACATGTTCTCACTCATATGTGGGCTAAAAAAGTGGATCTCATGGAGGTAGAGAGTAGAATGGTGGTTACCAGAGGCTGGGAAGGGTAGGGGGGGGGAGGGGAGGATGAAGAGAGGTTGGTTAATGGGTACAAAAATACAGATAGAAGGAATAAGTTCTAGTGTTTGATAGTACAGTAGGGTGACTATAGTTAACAATAATTTATTGTATATTTCAAAATAGCTAGAAGAGAAGAATTGGAATGTTCCCAACACAAAGAAAAGATAAATGTTTGAGGTGATGGATATCCCAATTACCCTGATTTGATCATTACACATTGTATGCATGTATCAAAATATCACATGTACCCCAAAAATATGTACAACTATTATGTATCAATAAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA4.ORF1.hs3_orang.pars,L1MA4.ORF2.hs5_gmonkey.marg,1149,1901,2489,6298,6660,362
L1MA5,TGACATCAGCAAGTTGGCTGACTACAAGGGGCCCACAACTCTTCTCTCCACCAAAAACGACCAAAACAACGAATAGATAACTACACTTTGAGTAGAATATCTAAGGGAGAGTACTGGAATTCAGCAAGGGAGTGACAGAAACCCTGGGAGGCATAGAAACTCAGGATGGCCGCATAGAGAGCGGAGCTAAGCAGAAGCATGCCACCTCGGGGCCTCAGCATCGCGACTGGCCTGAACCGCCAGCCAGGAGTGACCCTGACCGTCGAGAGACTCTTCATTGCAGGGAAAAAGTAAGTGGGAGATCCCCAGCAGCCCCCATTCCCACCATGGACGCCTGCAATCCTAGCTACAGGAGAGCCCCACAGCCCTCACAGGCCCTGAGCCCAGTATAGGGAGCTGCCTGGAGTCCACACGGCTGCATTGTCCCAGAGAAGGAACCCACACTGGGTCCCCCCCCCCCCCCTGGGCTCAAGGTGTCCTGGCACGGGCTGCCCTCAGCTTCTGTGATTTTGAGAATGGAGCCACTGCTAGACTCCATCCTTCCCTGGGGCCCAATTGCCCCCGCATCCCCACCTCCCTGGGGCCCTTCCCTGAGCCCCCCATCCCCCCGGGAGGCTGCGCCTTCGCAGCCCCAGCTAGACCCAGTGGTGGAGCTGTGACCCGGGCACCTGGGCCCACTGGAAGATCGGTGCCGTGGCTCAGCGCCCCAGCTGCACCCGCCTGTTCGGGGCTCATGCAGTGCCCTACACTCCCAGGAACAGGTGGTGCAGCACATCAGGGAGGCTACCCCCAGCACTCAGGGAGCCGATCCACCCGCTCCCCACGGCCCTGGGGCCTGCCGCCCCGGCGTCCCGCCGCCAGCCGTCACCCCTCCCCCTCCAGCGGCTGAGCCACCCTCTGCCTCCGTGCGCCCCCCGCCCTGCTGGGCTGCCACCCACGCCGCCCACCCCTGCCCAAGCCGCTCGCCTCACAGAGTCTGTGATATACTGACCCTCACTATTTCAGGGTCTAAAGTCACTACTACACAGTACTTAGTGCCCTGGAAGAGATGCTCCAAAAACCCTTGCCAGTCACTGCTGTAGTTTGCTTCCTTGGGCTGGGAAAGAAACAAAGACAGGCATCCAGGGCAAATACTTCCACTGTTGCCCAGGTCAGTGCCACCACTAAAAGCCGCAGCTTCCCCAGTTACCCTCCTCTTCGGCCTGCTTTGCCCAGACTGTCCATATGATCCATGTTCACTACTGCCGAGCCCGTGCTGGTCCCACCCTTCGCGCAGATATCTCGCCCGGCCTGCCCGCCATAGCCACGCACCCCTCCCAGGGTTGTAAGGCTGGGGCCCCGCCTCCGTCCACCCTCCCCTCACAAGGCGAAGCGCCGCCGTGTCCCCGCGATTCGCCCAGGGGTTCGCCCTCACTTCAGGCCAACACCATGGTGGCAGAGCCACCACATGCCCCTTTGCCTGGCACCCCCGGCCACCCCCGCCTCCCGGACAGCGGTGCTGGCCCCTTTGCGCGCTCTCTGGGGTCCTGGAGCCGGGCCGACCGGGGCCCCCCGCCCCCAGGAAAGCAGCAACTTTCCCCACTGGTGCCACAAACTCCTGCAGCCTAGGCCACTGAGGCACTCGCAGACATTGCTGACATTGATTACAGCTAAAGAAATTATACAGAGACTACACTACTGCACCCACCCAGAACCAAAGCCAACGCACCCTACCCAACCGACACCATAGGACCCATCTACAGGAAAAAGTCTTTCCCTATAAAAGCCACTCCATAAAATTGGAAGAGGTGACTGTTCCACCAGATGCGCAGATTGATGATGCACAGACATCAACACAGGGACACAAGAAACATGAAAAAGCAGGGAAATACGATGCCACCAAAGGAACATAATAATTATTTGGTAACAGCAGACCCCAATGAAAAGGAAATCAATTAATTGCCAGAAAAGGAATTCAAAATAATGATTTTAAAGAAACTCAATGAGATACAAGAAAATATAGATAGATCATTCAAAAAAATAAAAATTTATGATCTAAATGACAAATTCAACAAAGAAAAAAATAAAAAAAAAAAGAACCAAACAGAAATATTGCAACTGAAGAATTCAATGAATGAAATAAAAAATACAATCGAGAGCTTCAACAATAGACTAGATCAAGCAGAAGAAAGAATTTCTGAACTTGAAGATAGGTCATTTGAAATAACTCAATCAGAAAAAAAAAAAAAAAGAAATAAAAATGAAAAAAGAATAAAGAAAACTTATAAGATTTATGGGAACACATTAAGTGAAAAAAATATTCAAATTATGGGAGTTCCAGAAGAAGAAGAGATGGAAAAAGGCATAGAAAACCTATTTAATGAAATAATAGCTGAAAACTTCCCAAGTCTTGGGAGAGATATGGACATCCAGATCCAGGAAGCTCAAAGATTCCCAAATAGATTCAACCCCAAAAAGGTCTTCTCTAAGGCAAATTATATTCAAATTGTAAAAGTCAAAGACAAAGAGAGAATTCTAAAAACAGCAAGAGAAAAGTATCAAGTCACATATAAGGGAATCCCCATTAGACTAACAGCAGATTTCTCAGCAGAAACCTTACAGGCCAGGAGAGAATGGGATGATATATTCAAAGTGCTGAAAGAAAAAAATTGCCAGCCAAGAATACTATACCCAGCAAAGCTATCCTTCAGAAATGAAGGAGAAATAAAGTCTTTCCCAGACAAGCAAAAACTGAGGGAATTCATCACCACTAGACCAGCCTTACAAGAAATGCTTAAGGGAGTCCTACATCTGGAAAAGAAAAAGGATAATAATCACCATCATGAAAACATTCAAAAGACTACATCTGGAAGTGAAAGGATAATAACTACCATCATGAAAACACACAAAAGTATAAAACTCACTGGTAGAGCAGATGAAAGAGAAAGGAATAAATCTTATCACTACAGAAAACCACCAAACCACAAAGATAAACAATAAGAGAGGAAGAAAGGAACAAAGGATACAAAACAACCAGAAAACAATTAACAAATAACAGGAGTAAGTCCTCACCTATCAATAATAACCTTGAATGTAAATAGATTAAATTCCCCAATTAAAAAATATAGACTGGCTGAATGGATTAAAAAAAAAACCCAACTATATGCTGCCTAAAAGAAACTCACTTTACCTTTAAAGACACAAATAGACTGAAAGTAAAGGAATGAAAAAAGATATTCCATATAAAAAGAAACCAAAAAAGAACAGGAGAGGAGCTATACTTATATCAGATAAAATAGACTTTAAGTCAAAAAATATAAAAAGAGACAAAAAAGGTTATTATATAATGATAAAGGGATCAATTCAGCAAGAGGATATAAAAATTATAAATATATATGCACCCAACACCAGAGCACCCAGATATATAAAGCAAATATTATTAGATCTAAAGGGAGAGATAGACTCCAATACAATAATAGTTGGGGACTTCAACACCCCACTCTCAGCATTGGACAGATCATCTAGACAGAAAATCAACAAAGAAACATTGGATTTAAACTGCACTATAGACCAAATGGACCTAACAGACATTTACAGAACATTTCATCCAACAGCTGCAGAATACACATTCTTCTCATCAGCACATGGAACATTCTCCAGGATAGACCATATGTTAGGCCACAAAACAAGTCTCAACAAATTTTTAAAAATTAAAATCATATCAAGTATCTTTTCTGACCACAATGGAATAAAACTAGAAATCAATAACAAGAGGAACTTTGGAAACTGTACAAATACATGGAAATTAAACAACATGCTCCTGAATGACCAATGGGTCAATAAAGAAATTAAAAAGAAAATTAAAAAATTTAAACAAATGAAAATAGAAACAAAACATAACAAAACCAATGGATAAAAAAAAACAGTACTAAGAGGGAAGTTTATAGCAATAAAAGCCTACATCAAAAAAGTAGAAAGATTTCAAATAAACAACCTAATGATGCACCTCAAGGAACTAGAAAAGCAAGAACAAACCAAACCCAAAATTAGTAGAAGGAAAGAAATAATAAAGATCAGAGCAGAAATAAATAAAATAGAGACTAAAAAAAAAAAAAAAATAAACAAAAAAAAAATTTTTTTTGAAAAGATAAACAAAATCAACAAACTATTAGCTAGACTAACTAAAAAAGAGAGAAGACCCAAATAAATAAAATCAGAAACAAAAAAGGAGACATTACAACTGATACCACAGAAATACAAAGGATCATTAGAGACTATTATGAACAACTATATACCAACAAATTGGAAAACCTAGAGGAAATGGATAAATTCCTGGACACATACAACCTACCAAGATTGAACCAAGAAGAAATAGAAAACCTGAACAGACCAATAATAAGTAATAAGATTGAATCAGTAATAAAAAGTCTCCCAACAAAGAAAAGCCCAGGACCAGATGGCTTCACTGCTGAATTCTACCAAACATTTAAAGAAGAACTAATACCAATTCTTCTCAAACTATTCCAAAAAATTAAAGAGAAGGAAATTCTTCCAAACTCATTCTACAAGGCCAGCATTACCCTGATACCAAAACCAGACAAGGACACAACAAAAAAAGAAAACTACAGGCCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAAACCAAATCCAACAGCACATCAAAAAGATTATACACCATGATCAAGTGGGATTTATCCCAGGGATGCAAGGATGGTTCAACATATACAAATCAATAAATGTGATACATCACATCAACAGAATGAAGGACAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCATTTGATAAAATTCAACATCCCTTCATGATAAAAACTCTCAACAAATTAGGTATAGAAGGAATATACCTCAACACAATAAAGGCCATATATGACAAACCCACAGCTAACATCATACTGAATGGGGAAAAGCTGAAAGCTTTTCCTCTAAGAACTGGAACAAGACAAGGATGCCCACTTTCACCACTTTTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAGAGAAAGAAATAAAGGGCATCCAAATTGGAAAGGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATCTTATATATAGAAAAACCTAAAGACTCCACCAAAAAACTCTTAGAACTGATAAATAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGCATTTCTATACACCAATAATAAACTAGCTGAAAAAGAAATCAAGAAAGCAATCCCATTTACAATAGCTAAAAAAAAATACCTAGGAATAAATTTAACCAAGGAGGTGAAAGATCTCTACAATGAAAACTATAAAACACTGATGAAAGAAATTGAAGAAGACACAAAAAAAAAATGAAAAAAAATCCCATGTTCATGGATTGGAAGAATTAATATTGTTAAAATGACCATACTACCCAAAGTAATCTACAGATTCAATGCAATCCCTATCAAAATACCAATGACATTCTTCACAGAAATAGAAAAAAAAAATCCTAAAATTTATATGGAACCACAAAAGACCCCAAATATAGACAAAGCAATTCTGAGCAAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAAATATACTACAAAGCTATAGTAACCAAAACAGCATGGTACTGGCATAAAAACAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAATCCATATATTTACAGCCAACTGATTTTTGACAAAGGTGCCAAGAACATACATTGGGGAAAGGACAGTTTCTTCAATAAAGGTGCTGGGAAAACTGGATATCCATATGCAGAAAAATAAAACTAGACCCTCTCTCACCATATATAAAAAAATAAACTCAAAATGGATTAAAGACTTAAATGTAAGACCTGAAACTATGAAACTACTAGAAGAAAACATAGGGGAAATGCTTCAGGACATTGGTCTGGGCAAAGATTTTATGGATAAGACCTCAAAAGCACAGGCAACAAAAACAAAAATAGACAAATGGGATTATATCAAACTAAAAAGCTTCTGCACAGCAAAGGAAACAATCAACAGAGTGAAGAGACAACCTGCAGAATGGGAGAAAATATTTGCAAACTATTCATCTGACAAGGGATTAATATCCAGAATATACAAGGAACTCAAAAAAATAAACAACAAAATTAAAAAATGGGCAAATGATCTGAATAGACATTTCTCAAAAGAAGACATACAAATGGCCAACAAGTATATGAAAAAATGCTCAACATCACTAATCATCAGGGAAATGCAAATCAAAACCACAATGAGATATCATCTCACCCCAGTTAGAATGGCTATTATCAAAAAGACAAAAAAAAAAAAATGTTGGTGAGGATGTAGAGAAAAGGAAACTCTTATACACTGTTTGTGGGAATGTAAATTATAACACCCATTATGAAAAACAGTATGAAGTTTCCCAAAAAACTAAAAATAGAACTACCATATGATCCAGCAATCCCACTACTGGGTATATATCCAAAGGAAAGGAAATCAGTATATCAAAGAGATATCTGCACTCCCATGTTTATTGCAGCACTATTCACAATAGCCAAGATATGGAATCAACCTAAGTGTCCATCAACAGATGAATGGATAAAGAAAATGTGGTATATATACACAATGGAATACTATTCAGCCATAAAAAAAAATGAAATTTTGTCATTTGTGGCAACATGGATGAGCCTGGAGGACATTATGTTAAGTGAAATAAGTCAGGCACAGAAAGATAAATACTACATGTTCTCACTCATATGTGGAAGCCTAAAAAAGTTGATCTCATAGAAGTAGAGAGTAGAATAGTGGTTACTAGAGGCTGGGAAGGGTAGGGGGGAGGGGGGATAGGGAGAGGTTGGTTAATGGATACAAAATTACAGCTAGATAGGAGGAATAAGTTCTAGTGTTCTATAGCACTGTAGGGTGACTATAGTTAACAATAATTTATTGTATATTTTCAAATAGCTAGAAGAGAGGATTTTGAATGTTCCCAACACAAAGAAATGATAAATGTTTGAGGTGATGGATATGCTAATTACCCTGATTTGATCATTACACATTGTATACATGTATCAAAATATCACTCTGTACCCCATAAATATGTACAATTATTATGTGTCAATTAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA5.ORF1.hs2_gorilla.marg,L1MA5.ORF2.hs0_human.pars,1813,2839,3031,6813,7175,362
L1MA5A,GAGAGTGATGTCAGCAAGATGGCTGACTAGAGATGCCTGGCATTCATCCCCCACAAAAAAAGGGCCAAAGCAACGAATAAACAGCTAAGATTTGACTGGAGTGTCGAAGGGAGAGTGCTGGAGTGCAGCAGGGGAGTGGAGATGCACCTGTGGTGACTGGAAGTCCAGGAGGGCAGCATGGAGGCACCTGGCCTCTGCAGCCTCATCTCCCCCACCTGGATCAGATTGGCCTAGAGTCAGGAGGGACTTCCCATTGTGGGGAAAAGGTAAGCAGAAGATCCCCACCAGCCCCCATTGCCACTGCAAACACCTACAGTCCTTACTACAGGAGAATCCCACAGTCCTCACAAGCCCTGAGCCCAGTTTGGAGAGCTGCCGGGAATTCATGCAGCTGCATTGCCCCAGATTAGGAGCACAAGGTGTGCACTCCCCCCACCCCCACCCACCCCCTGTGAGCCAAGCTGCTGCAGCATGGTGCCATCTTGAGACCAGAGCCACCTCTGGAGTGCACCCTGCTCTGGGGGCCAGTAGCCACTGCACCTCTCCAGCACTGGGGCTCCATCTTCATTCCACCAAGCCCACACAGGTGGCTGAATGCCACAACCCCAGCTGTGCGGAGCCTGGGCCCAGGATTGGCTGTGACTCTGGTCCTGCACATCAGGGAAACCAACCCCTGCCTCCCCCACCTTCCAGCAAGAGAAACGGTTTGCCGTTCCACCCAGGGCAAACCCACCCTTGAGCCAGCCAAACTACTGTGTGCCCTCCCCCGAGCAGGAGAGGTCCCCAAGCCACCAAGCAGCTGACATGCCCCCAGGCCAGCCGAGTGGCTATGTGCCCATGCCCAGGGCCTGAGAAACAGCCCCGTGGGTCCCCCCCGGCAAACAGACCCCCAGGCCAGCTGAGCAGCTGTGCACCCACATCCCAGGCCTGAAAAACAGCCCCATGGGCCCCCCCCAGTGGACACGCCCCCAGGCCAGCCAAGCAGCCTTGTACCCACATCCTGGGCCTGAGAAACAGCCCTGTGGGCCAATATGCCCACAGGTTGGACGAGCAGCTATATGGCCATGTCCCAGGTCCAAAAGAGTCCTGTGGGCCACCACCCACAGAAACGCCCCAAACCAGCCAAGCAACTGTGCAGTTATATCGTGGGCCTGACAAACAGCCCTGTACCCACCCATGGTAGCCATGCCCACCCAGGCTGGTCAGGCCACTGCATGCCCATGTCTCAAGCTGGAGAAATGGCCTTGGTAGGATGCCCTCCCCCCCGGCCAATTGAGCACTGCTGTGTTTCATAGGCCCATGTCTCATGCCTAAGAACCCGTCTCACAGGCAACCCCCGGCAGACACACCCCCAGGCCAGCCGAGCAGCCTTGTGCCTGTGTCCTGGGCCTGAGAAACAGCCCTATGGGCTGCCCCTGGCAGACATGCCCCCAGGCCAGCCGAGCAGCTGTGTGCCCGCATCCTAGGCCTGAGAAACAGTCCTATGAGCTGCTCCTGGCAGGAAACCCCTCAGGCTGGCCAAGCAACCACATGCCCATGCTCCTAGCCAGAGTAACAGCCCTGTGGCCCCAACCCCAGCGAGCCAGACCCTAAGTTGGCTGACCCATCATGTGCATGCACGTGCCCCCGACCTGAGAAACAGCCCAGTGAGCCCACCCCTGGCAAAGCCACACCACTGCCACCACAAATTCTCTCAGCCTAGGCCACTGAGACACTCACAAATGTCACTAGTGTGGATTACAGCTGAAGAAACTACATGGAGACTACACTACTGCATCCACCTAGAACCAAAGCCAACACACCCCACCAAACTGACACCCCAAGACCCATCTATACGAATAAGTCTTTCCCTACAAAACCTACTCCATAAAATTGGAAGAGGTGACTTTTCCACCAGCAAGCAGAAGAAAAATTTCAGAACTTGAAGATAGATCTTTTGAAATAACACAAACACTGGCAAAAAAAAAAAAAAAAAAAATGAAAAAAAGCTACAGGATTTTTGGTGTTCCACAAGGAAAAGAAAAGAATAAAGGTAAAGAAAACATATTTAATGAAATAATAGCTGAAAACTTCCCAAGTCTTGGGAGAGAGATGGACATCCAGATCCAGGAAGCTCAAAGAACCCCAAATAGATTCAACCCAAAAAGGTCCTCTCCAAGGCACATTATAGTCAAATTGTCAAAAGTCAAAGACAAAGAAAAACTAAAAACAGCAAGAGAAAAGCATCAAGTCACATATAAGGGAATCCCCATTAGACTAACAGTGGATTTCTCAGCAGAAACCTTACAGAGCCCAAGAGAGAATGGTATGATATATAAAAAAGACAAAAAAAAAAAACTGTCTCCGACAAGAATATTATACCCAGCAAAGCTATCCTTCAGAAATGAAGGAGAAATAAAATCTTTCACAGACAAGCAAAAACTAAGGGAATTCATCACCACTAGACTAGCCTTACAAGAAATGCTCAAAGGAGTCATACATCTGGAAATAAAACTCACTGGTAGAGCCAATACACAAAGGAGAAAGAGAAAGGAATCAAACCTTATCACTACAGAAAACCACCCAACCACAAAAATAAACAATAAGAGAGGAAGTAAGGAACAAAGGATATACAAAACAACCAGAAAACAATCAATAAATGACAGGAGTAAGTCCTCACCTATCAATAATAACCTTGAATGTAAATAGATTAAATTCCCCATTTAAAAGATATAGACTGGCTGAATGGATTAAAAAAATAAAAAAAAAAAAAGACCCAACTATATGCTGCCTACAAGAAACTCACATCACCTGTAAAGACACACATAGACTGAAAGTGAAGGGATGGAAAAAAAATTTTCAATCAAAAAGAAAACAAAAAGAAGCAGGAGTAGCTATACTTATATCAGACAAAACAGACTTCAAGTCAAAAACTGTAAAAAGAGACAAAGAAGGACATTATATAATAATAAAGGGATCAATTCAGCAAGAGAATATAACAATTGTAAATATATATGCACCCAACACCGGAGCACCCAGATATATAAAGCAAATATTATTAGATCTAAAGGGAGAAATAGACCCCAATACAATAATAGTTGGGGACTTCAACACCCCACTCTCAGCATTGGACAGATCATCTAGACAGAAAATCAACAAAGAAACATTAGATTTAAACTGCACCATAGACCAAATGGACCTAACAGACATTTACAGAACATTTCACCCAACAGCTGCAGAATACACATTCTTTTCATCAGCACATGGAACATTCTCCAGGATTGACCATATGTTAGGACACAAAACAAGTCTCAAAAAATTTTTAAAAATTAAAATTATATCAAGTATCTTATCTGACCACAATGGAATAAAACTAGAAATCAATAACAAGAGAAACATTCGAAACTATACAAATACATGGAAATTAAACAACATGCTCCTGAATGACCAATGGGTGAAGGAAGAAATTAAGAATGAAATTTAAAAATTCCTTGAAACAAATGAAAATAGAAACACAACATACCAAAACCTATGGGACACAGCAAAAGCAGTATTAAGAGGCAAGTTTATAGCAATAAATGCCTACATCAAAAAACTAGAAAGATTTCAAATAAACAACCTAATAATGCACCTCAAAGAACTAGAAAAGCAAGAACAAACCAAACCCAAAATTAGTAGAAGGAAAGAAATAATAAAGATCAGAGCAGAAATAAACAAAATTGAGACTAAAAAAATACAAAAGATCAATGAAACAAAAAGTTGGTTTTTTGAAAAGATAAACAAAATTGACAAACCATTAGCTAGACTAAGAAAAAAAAAAAGAGAGAAACAAATAAATAAAATCAGAAATGAAAAAGGAGACATCACAATAGATACCACAGAAATACAAAGGATCATTAGAGACTACTATGAACAACTATATACCAATAAATTTGAAAACCTAGAGGAAATGGATAAATTCCTGGACACATACAACCTACCAAGATTGAACCAAGAAGAAATAGAAAACCTGAACAGACCAATAACAAGTAATAAGATTGAATCAGTAATAAAAAGTCTTCCAACAAAGAAAAGTCCAGGACTGGATGGCTTCACTGCTGAATTCTACCAAACCTTTAAAGAAGAATTAATACCAATTCTTCTCAAACTATTCCAAAAAATTGAAGCGGAGAAAATTCTTCCTAACTCATTCTATGAGGCCAGCATAACCCTGATACCAAAACCAGACAAGGACACAACAAAAAAAAAAAACTACAGGCCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATCCAACAACACATCAAAAAGATAATACACCATGATCAAGTGGGATTTATCCCAGGAATGCAAGGATGGTTCAACATATGCAAATCAATAAATGTGATACATCACATCAACAGAATGAAGGACAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCATTTGATAAAATTCAACATCCCTTCATGATAAAAACTCTCAATAAATTAGGTATAGAAGGAAAGTACCTCAACACAATAAAGGCCATATATGACAAACCCACAGCTAACATCATACTGAATGGGGAAAAGCTGAAAGCTTTTCCTCTAAGAACTGGAACAAGACAAGGATGCCCACTCTCACCACTCTTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAGAGAAAGAAATAAAGGGCATCCAAATTGGAAAGGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATCTTATATATAGAAAAACCTAAAGACTCTACCAAAAAACTCTTAGAACTGATAAATAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGCATTTCTATACACAAACAACAAACTAGCTGAAAAAGAAATCAAGAAGGCAATCCCATTTACAATAGCTACAAAAAAAATAAAATACCTAGGAATAAATTTAACCAAGGAGGTGAAAGACCTCTACAAGGAAAACTACAAAACACTGATGAAAGAAATTGAAGAGGATACAAATAAATGGAAAGACATCCCATGCTCATGGATTGGAAGAATTAATATTGTTAAAATGACCATACTACCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAAATACCAATGACATTCTTCACAGAAATAGAAAAAAATATTCTAAAATTTATTTGGAAACAAAAAAAACCCCAAATAGCCAAAGCAATCCTGAGCAAAAAGAAAAAAGCTGAAGGCATCACACTACAAGACTTCAAAATACAAACTATAGTAAACAAAACTAGAAGGCAACTGGCACATAAAAACAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATTAATCCACATATCTACAGCCAACTGATTTTTGACAAAGATGCCAAGAACACTCATTGGGGAAAGGACAATCTCTTCAATAAATGGTGCTGGGAAAACTGGATATCCAAATGCAGAAAAATAAAACTAGAACCCCCACTCTCACCCTATAAAAAAATCAACTCAAAATGGATCAAAGACCTAAATGTAAGACCTGAAACTATAAAACTACTAGAAGAAAATATAGGGGAAATGCTTCAGGACATTGGTCTGGGAAAAGATTTTATGAATAAGACCTCAAAAGCACAGGCAACAAAAGCAAAAATAAACAAATGGGATTATATTAAACTAAAAAACTTCCGCACAGCAAAAGAAAACAATCAACAGAGTAAAAAGACAACCTACAAAAAATGGGAGAAAATATTTGCAAACTATTCATCTAACAGGGGATTAATATCCAGAATATACAAGGAACTCAAACATCTCAACAGCAAAAAAAAAAAAAATCTTATTAAAAAATGGGCAAATGATCTGAATAGACATTTCTCAAAAGAAGACATACAAATGGCCAACAAATATATGAAAAAATGCTCAACATCACTAATCATCAGGGAAATGCAAATCAAAACCACAATGAGGTATCATCTCACCCCAGTTAGGATGGCTATTATCAAAAAGACAAAAAAAAAAAATGCTGGTGAGGGTGCGGAGAAAAGGGAACTTTTTTAAACCGTTGGTGGGAAATTAAAACTAGTAAAGCCACTATGGAGAACAGTATGGAGGTTCCTCAAAAAACTACAAATAGAACTACCATATGATCCAGCAATCCCACTACTGGGCATTTATCCAAAGGAAAGGAAAATAAGTATATTAAAGAGACATCTGCACCCCCATGTTTATTGCAGCACTATTCACAATAGCCAAGATATAGAGTATAACCCTAGGTGTCCAACAACGGATGAATGGATAAAGAAAATGTGGTATATATACACAATGGAATACTATTCAGCCATAAAAAAGAATGAAATCCTGTCATTTGTAGCAACATGGATGGAACTGGAGGACATTATGTTAAGTGAAATAAGCCAGGAACAGAAAGTTAAACACTGCATGTTCTCACTCATATGTGGACTAAAAAAAGTTGATCTCATAGAAGTAAAAAGTAGAACAGAGGATACTAGAGGCTGGGAAGGGTAGGGGGAAGGGGGGGATAGGGAGAGATTTGTTAAAGGATACAAAATTACAGCTAGATAGGAGGAATAAGTTCTAGTGTTCTATACCACTGTAGGATGACTATAGTTAACAATAATATATAGTTTCAAATAGCTAGAAGGAGGATATTGAATGTTCCCAACACAAAGAAATGATAAATGTTTGAGATGATGGATATGCTAATTACCCTGATCTGATCACTATACATTATATGTATCGAAACATCACTATGTACCCCATAAATATGTACAATTATTATGTGTCAATTTAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA5A.ORF1.hs4_gibbon.pars,L1MA5A.ORF2.hs1_chimp.marg,1897,2487,2639,6469,6825,356
L1MA6,GATAAGCATGTCATCTAGAGGGTTGTGTCCAGCATTCACCCCGCCTTTCTCCCCCAAGAAAAAGAGACCAAAGCAACAAATAAACAACTATATTTCAACTGAAGTGACTGAGGAAGAGTGCTGGGCAGCACCAGGGGAGTGGCAAAATCTGTGTGGCATAGAAGCACCGGAGATCGCAATAGAAAGGGGAGAGAGACACCCTGCCTCTGCGCCACTGTCTCCCCTCCCAGGATTAGCTCCGAGTCGAGGAGGGCTTCTTCTTACAGGAGAAAGGTAAGGTGGAAGCCCCTAGTTGTCCCCCATTCCTGCCACAAATACCAGCAGTTTCTGCTAGAGGGTCCCATCCGTCCCTCCCCGACCTCAATCGCACTGGGGCCATTGCTTGAGGTATCTGCACTGTCTTGCTCTACGGGTAGGGGCCCATCTTTAGTCCCCCCCACTCCTGTGACCTAAGCTGCTATGGCACAGCACCATCTTGAACCCAGACCCACTGCTAGAGCATGGTAGACGCTAAGGGCGCGTCTCCAATGATTCTCTCCTTGCCACAGCCCCTAGCCCAACTGTCCCTGGATGACATTACCTTCACAAGAGCTACGGATCCCTGAACACATAAGCGAGGCCCTGAAGCCCCCTTGGAATACAAAGATGAGCAAATCCGTGCCTGGACCCTAGTGGGACTGGTTCCCTATCTCTATGATACTGCTGCCCCCGGGCCACAAGGCTACCTAGTCCGCATGCCCCCCCGGACCTAGGGTTTTGCACCCCAGAACAATGACCAGAGAGACAGTCATTTTGCCTCACCACCCTCCTGCGTGTCGCGCCTGACAGCCGGCTGCCCCAGCCCCCCAGCGCCAGCATGACCACACTTACAGCCAGGCCCCCTCAGTGCCCCGCCAGGCCCAGAGAGGGGAGTTGGTTCGCGACACTTCCAGTGTACAACACTGGACCGGGTCTCTACCCATGCCCAAGGAGACATGCCACAACAGAGAGGTTCCTTCCGGTCTCCCCGATGCAGGCAGCCTGGGCCACTGACGTGTCCGCCTTGACCACCTATGTGGGTCTCCCCCACAGCACCTGCACTGCCCCCGCACCACCCATTGCATTCTTGGCCTGAGCCATCGCGCCTGTTTTGACCGGCTCCCCAGGCTCAGTTGCTAGGAAAAGGTTTTCTCTTATAAATTTTGAAACAAGTCCCCAGAAGGATGGGCACAAACAAAGCCAGACTGCAAAGACTGAAATAAATACCTAACTCTTCAATGCGCAGACATCGATGTACATTCACAAGCATTAAGAACAATCAGGGAAATATGACCTCACCAAATGGACAAAACAAGGCGCCAGTGACCGACCCTAAAGAGATGGAGATGTATGATCTGTCAGACAAGGAATTCAAAATAGCTGTTTTAAGGAAGCTCAGTGAACTTCAAGAAAACACAGAGAAACAATTCAGAAATTTATCAGAAAAATTTAACAGAGAGATTGAAATATTAAACAAAAAAAAAAATAAAAAAATATATAAAAAAATCAAACAAAATCTTGGAGTTGAAAAATTCAATAAATGAATTAAAAAATACAATTGACAGTGTCAATAACAAATCTGATCTTAAACAAAAGAAAGAAATTTTTGAACTTGAAGACAGGTAAGTTGAAATATTAATAATCCAGAGGGGTAAAAAAGATTTAAGAATAAAAAGGAATAAAGAAAGCCTACAGGACTCATGGGACACAATTAAGCAAACAAATATTTGCATTATAAGGATGCCAGAGGGGGAAGAGATGAAGAAAGGCACAGAAAACTTATTTAACAAAATAATAGCTGAAAACTTTCCAAGTATTGAGAGAGATATGGACATCCAGATCCAGGAAGCTCAAAGATTCCCAATTAGATTCAACCCAAAAAGATTCTCTCCAAGGCACATTATAATCAAACTGTCAAAAGTCAAAGACAAAAAGAGAATTCTAAAAGCTGCAAGAGAAAAGCATCAAGTTACATATAAGAGAATCTCTATTAGACTATCAGCAGATTTTTTAACAGAAATCTTGCAAGCCAGGAAAGAATGGGATGATATATTCAAAGTGCTGAAAGAAAAAAAAACTCAAACAAGAATATTATATCCAGCAAAGCTATCTTTTAAAAATGAAGGAGAAATAAAGACCTTCGCAGACAAGCAAAAACTGAGGGAATTCATCACCACTATGCTGGCCTTACAAGAAATGCTTAAAGGAGTGCTACAACTGGAAGTGCTAATGTGTAACAAGAAAACATCTGAAGGTATAAAACTCACTGAAAGTAAGTATACAAACAAATTCAGAATACTCTAATACTGTAATTGTGGTGTGTAAACCACTTATATCTTTAGTATGAAGACTAAAAGACAAAACTATTAAAAATAATAATAACTACAATAATTTGTTAAGAGATAGGCTATAAAAAGATGTAAATTGGAAATTCAAAAATTCAAAATGTGGGGGGAAGGGAAGGTAAATGAAGGTGTTTTTTTTTTTTTTTTTTTTGTTTTTTTTGTGATCAAAGTTAAGTTGTTATCAGCTTAAAATAACCTGTTATAACTATAAGAGTTTTTTGTAAGCCTCATGGTAACCACAAAGCAAAAATCTATAATAGATACACTAAAAATAAAAAGCAAGGAATCAAAACATACTACTAGAGAAAATCACTTAACCACAAAGGAAGACAGTAAGAGAGGAAGAAAGAAGAAAGAATCTACAAAACAACTAGAAAACAAGTAACAAATGGCAGTAGTAAGTCCTTACCTATCAATAATTACCTTGAATGTAAATGGATTAAATTCTCCAATTAAAAGACATAGAGTGGCTAAATGGATAAAAAAAAAAGACCCAACTATATGCTGCCTACAAGAGACTCACTTCACCTGTAAAGACACACATAGACTGAAAGTGAAAGGAAGGAAAAAAAAATTTCATTGAAAAGGAAAACAAAAAAAAGCAGGAGTAGCTATACTTATATCAGATAAAATAGACTTTAAGTCAAAAAATGAAAAAAAAGGCCATTATATAATAATAAAGGGATCAATTCAGCAAGAGGATATAACAATTATAAATATATATGCACCCAACATTGGAGCACCTAAATATATAAAGCAAATATTAATAGATCTAAAGGGAGACTGCAATACAATAATAGTAGGGGACTTCAACACCCCACTTTCAACAATGGACAGATCATCCAGACAGAAAATCAACAAAAAAAAAATAGAATTAAAAATGGACCTAACAGACATTTATAGAAAATTCCATCCAACAACTATAGAATATACATTCTTCTCAACTGCACATGGAACATTCTCCAGGATAGATCATATGTTAGGCCACAAAACAAGTCTTAACAAATTTAAAAAAATCAAAATCATATCAAGTATCTTTTCTGACCACAATGGAATAAAACTAGAAATTAATAACAAGAAAAACTTTGGAAACTTTACAAATACATGGAAATTAAACAACATGCTCCTGAACAACCAATGGGTCAATAAAGAAATTAAAAGGAAATTAAAAAAATTTTTTAAGACAAATAAAAATGGAAAACACACAATACCAAAACCTATGGGATACAGCAAAAGCAGTTCTAAGAGGGAAGTTTATAGAAATAAATACCTAAATAAAAAAAAAAAAAAAATTATAAACAACCTAACAATGCACCTTAAAGAACTAAAAAAAAAAAAAAAAACTAAACCCAAAATTAGTAGAAGAAAAGAAATAATAAAGATCAGAGCAGAAATAAATAAAATAGAGACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTTTGTTTTTTGAAAAGATAAACAAAATTGACAAACCTTTAGCTAGACTAAGAAAAAAAAGAGAGAAGACTCAAATAAATAAAATCAGAGATGAAAAAGGAGACATTACAACTGATACCACAGAAATACAAAGGATCATAAGAGACTATTATGAACAACTATATGCCAACAAATTGGAAAACCTAGAAGAAATGGATAAATTCCTGGACACATACAACCTACCAAGATTGAATCATGAAGAAATAGAAAATCTGAACAGACCAATAATGAGTAATGAAATTGAATCAGTAATAAAAAGTCTCCCATCAAAGAAAAGCCCAGGACCTGATGGCTTCACTGCTGAATTCTACCAAACATTTAAAGAAGAACTAATACCAATTCTTCTCAAACTATTCCAAAAAATTGAAGAGGAGGGAATTCTTCCAAACTCATTCTATGAGGCCAGCATTACCCTGATACCAAAACCAGACAAGGACACAACAAAAAAAGAAAACTACAGGCCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAAAATTAAATTAAAACAGCACATTAAAAAGATCATTCACCATGATCAAGTGGGATTCATCCCAGGGATGCAAGGATGGTTCAACATATGCAAATCAATAAATGTGATACATCACATTAACAGAATGAAGGACAAAAACCATATGATCATTTCAATAGATGCAGAAAAAGCATTTGATAAAATTCAACATCCCTTCATGATAAAAACTCTCAACAAATTAGGTATAGAAGGAATATACCTCAACACAATAAAGGCCATATATGACAAACCCACAGCTAACATCATACTGAATGGGGAAAAGTTGAAAGCTTTTCCTCTAAGATCTGGAACAAGACAAGGATGCCCACTTTCACCACTTCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAGAGAAAGAAATAAAAGGCATCCAAATTGGAAAGGAGGAAGTCAAATTGTCCCTGTTTGCAGATGACATGATCTTATATATAGAAAACCCTAAAGACTCCACCAAAAAACTGTTAGAACTAATAAACAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGCATTTCTATATGCTAATAGTGAACTATCTGAAAAAGAAATCAAAAAAACAATTCCATTTAAAATTGCCAAAAAAATAAAATACCTAGGAATAAATTTAACCAAGGAGGTGAAAGATCTCTACAATGAAAACTATAAAACATTGATGAAAGAAATTGAAGAGAACACAAATAAATGGAAAAATATATCATGTTTATATATTGGAAAAATTAATATTGTTAAAATGTCCATACTACCCAAAGTAATCTACAGATTCAATGCAATCCCTATCAAAATACCAATGACATTCTTCACAGAAATAGAAAAAAAAATCCTAAAATTTTTATGGAAACACAAAAGACCCCAAATAGCCAAAGCAATCTTGAGCAAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAAATATACTACAAAGCTATAGTAACCAAAACAGCATGGTACTGGCATAAAAACAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAATCCATACATTTACAGCCAACTGATTTTTAACAAAGGTGCCAAGAACACACATTGGGGAAAAAACAGTCTCTTTAATAAATGGTGCTGGGAAAATTGGATATCTAAAAGCAAAAAAATAAAACTAGACCCCTATCTCTCACCATATACAAAAATCAACTCAAAATGGATTAAAGACTTAAATGTAAGACCCAAAACTATGAAACTACTAGAAGAAAACATAGGGGAAATGCTTCATGACATTGGTCTGGGCAAGGATTTTTTGAATAAAACCTCAAAAGCACAGGCAACAAAAGCAAAAATAGACAAATGGGATTACATCAAACTAAAAAGCTTCTGCACAGCAAAGGAAACAATCAACAGAGTGAAGAGACAACCTACAGAATGGGAGAAAATATTTGCAAACTATACATCTGACAAGGGGTTAATATCCAGAATATATAAGGAACTCAAACAACTCAAAAAAAAAAAAATAAAAAATATAATTAAAAAATGGGCAAAAGACCTGAATAGACATTTCTCAAAAGAAGACATACAAATGGCCAACAGGTATATGAAAAAATGCTCAACATCACTAATCATCAGGGAAATGCAAATCAAAACCACAATGAGATATCACCTCACCCCAGTTAGAATGGCTATTATCAAAAAAAAAAAAACAAATGTTGGTGAGGATATAGAGAAAAGGGAACACTTATACACTGTTGATGGGAATGTAAATTAGTACAACCATTAAGGAAAACAGTATGGAGGTTCCTCAAAAAATTAAAAATAGAACTACCATATGATCCAGCAATCCCACTACTGGGTATATATCCAAAGGAAATGAAAGCAATCTGCACTCCCATGTTTATTGCAGCACTATTCACAATAGCCAAGATATGGAATCAACCTAAGTGTCCATCAATGGATGAATGGATAAAAAAAAATGTGTATATATACACAATGGAATACTATTCAGACATAAAAAAAAATGAAATCCTGTCATTTGTAACAACATGGATGAACCTGGAGGACATTATGTTAAGTGAAATAAGCCAGGCACAGAAAGACAAATACTGCATGATCTCACTCATATGTGGAAATCTAAAAAAGTTGATCTCATAGAAGTAGAGAGTAGAATAGTGGTTACCAGAGGCTGGGGAGGGGAGGGGGGAAGGGGGGATGGGGAGAGGTTGGTCAATGGGTACAAAGTTACAGTTAGATAGGAGGAATAAGTTCTGGTGTTCTATTGCACAGTAGGGTGACTATAGTTAACAATAATGTATTGTATATTTCAAAATAGCTAGAAGAGAGGATTTTGAATGTTCTCACCACAAAGAAATGATAAATGTTTGAGGTGATGGATATGCTAATTACCCTGATTTGATCATTACACAATGTATACATGTATTAAAACATCACATTGTACCCCATAATATGTACAATTATTATGTGTCAATTAAAAATAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA6.ORF1.hs6_sqmonkey.marg,L1MA6.ORF2.hs5_gmonkey.pars,1531,2241,2752,6515,6883,368
L1MA7,TCCACTGCTCCTGATTCCAGGCCAGTGCCCATGGAGGAAGAATTCAGACCTGCCCCAGGCCAGACGGAAATCTGCTACCCTATCAGGAGAAACCTGAGTACAAGTCCCCTTTAACAACAGCTGACTGAAGTGGCCTTGGGCCCCGCCCTGAATAAATTTCAGTGGTAGCCAAGCTATAGCAATCATGGTCCTTGGGTAAACCCCAGTGATGCACTGTTCTGGGAGGCTGTGGGCTTGTGGTATGACCCAGAGTGATACCAGCTGTGGAGGTCATGGGAGTGCTCTTGTCACCTCTTCCCCAACACCAGGCAGTGCAGTGTGGAGACAGAATCCTTCTACTCTGAATAAGGAGAGGAAAAAGTAGAAGGGACCAGCCCCGCCCACCACAGAACAATGCAGCCAACCAAATCCTGGGGCTATCCTTAGCCACATAGCCGACCCAGTGTCATGTCCCTAGAAGTGACTTTCCTCTGACGGGAAATTTTGACTCAGTTAAGAGCCAGCCGCTGCTCAGCTTATTAAACAAACAGCCGTCCTATGCTGCCGAAAACCCTAATCCAGTGGCCCAGCCTGTCAGGGTGGAAATCTTTCAAGCCTTGTTTGCAAACAGGCCTGGCCTGTGTTGTTACGTGCCCAAGTGGTCACCTCTCCCAGCCTCAGAACTAAGGCCGTCAGCCTTGTCCAACTTTAGATCCCAAATAGCTGAATAGCCCAGCAAGGGAATACATCTTCTGCCCAGTCTGACCAGAGGCAATTGCAGAATCCAGTCAGCAACTTTGCCTAATAGAAGACCCCAGCCAGCGATCTCGCTGGACCTCAGAGCACAGCCAGCTGTCCCATGAGACACCGGATCAAAGGTAGCAGCCCAGCCCAAACTAAAGAAATGACAACAATGTCTACATGTCTGGGGTTATTACCAGCTAGCCCACCCAGAATCACAGGCAAGACTAAATAGTGAAGATCTATCCCCACAAAAGAACACTAGGAAGGCTAGAAGAGGGAGCCTGTTTCTTAAAGTTCAAAGATACCAGTATGAGACATAATAACAAAGAAGTAAAGAAGAATAAGACAATCCTGACAAAGTTACAAGAATGCAATAAAGTTCCAATAATCGACCTCAAAGGAAGGAAGATTTATGAATTCACTGAAAAAGAATTCTAAAAAATTCTTTTAATGAAGTTCAGTGAACTACAAGAAAATACAGATAAGAAATTAAATGAAATTTGGAAAACAAATCATTGACAAAATTAAAAATTTAATAAAAAAAAAAAAAACAAAAAAAGAAGAAATAAGAAAGATAGAGAATAGAATAACAATGACTAAACTAAAAAAATAAATTAAAAAGTAAAGCTTAACAGCGAGCTAAATTGTAGATATAAAAAATAAAATAACTGAAATGAAAAATTCAATAGAAAGGTTTAACAGCAGAATTGATCAAGCAGAAGAAAAGATCAGTGAACTTAAAAAAAGGAAATTTAAAATTATCAAATTAGAAGAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAACAGCCTAAGGAAATTATGGGACACCATCAAACGGACTAATCTATGCATAATTGGAGTTCTAAAAGAAAAAGAGAAAAAAAAAGGAACAGAAAGTATATTTAAAGAAATAATGACTGAAAACTTCCCAAATCTGGGGAAAGATATAAACATTCAGATACAGGAAGCTCAAAAGATTTCAAATAAAATTAATCCAAAAAAGACTCAAAGACATATCATAATCAAATTTCAAAAAATCAAAGAAAAAAAAAAAATTTTGAAAACAGCAAAAGAAAAAAAACACATCACATACAAGGGAACCCCAATAAATTTGTCAGCAGAATTTTTAGAAAAAAAATCTAAGGCCAGAGGGAAGATGGAAGTAATATATAAAAAAATTAATGAAAAAAAAAAATTTCCACACAAAATTTTGTATACAGACAAAATATGCTTTACAAAAGAAGGAGAAATAAAAAATTTTTCAAACCAAAAAAAGGTTAAGGGATTTTATAACAACCAACCCTGCTTAAAAGAAATGCTAAAAAGAGTTCTTTATAGGGATAATTTAAACAGAAACAACCAAACTTAAGCTGAAACAAAAGGCTGCTAATTAATAACATAAAAAAAAATAAAAATCTAAAATTCACAATTAAATAAGTAATACATAGTCATATTCAGAATACTCTAATACTGTAATGGTGGTGTGTAAAGCAATTTTATCCCTAGTATGAGGGTTAAAAGACAAAACTATTAAAAACAACTATAGCTACAATAAATTGTTATGAAATAAAAAAATATAAATTATGAAAATAGTGACATCAAAATCATAAAAGGTGGAGGGGGGGGAAAAAAGAGTGAAGGTTTTGTATGTAATCAAAGTTAAGTTGTTATCAGCTTAAAATAGCCTGTTTTAAGTATAAGATGTTTTATGTAAGCCTCATGGTAACCACAAAGCAAAAACCTATAGTAGATACACAAAAAATAAAAAGAAAGGAATCAAAGCATACCACTACAGAAAACCATCAAACCACAAAGGAAGACAGCAAGAAAGGAAGAAAGAAACAAAAGATCTACAAAACAACCAGAAAACAATTAACAAAACCTATCAATAATTACCTTGAATGTAAATGGATTAAATTCTCCAATAAAAAGACATAGAATGACTGAATGGATTATAAAAAAAAAAAACCAAACTATAGCTTGTTTAAAAGAAACTCACTTTACTTTTAAAGACACACATAGACTGAAAGTGAAGGGATGGAAAAAAATATTTCATGCAAATAGAAACCAAAAAAGAGCAGGGGTAGCTATACTTATATCAGACAAAATAGACTTTAAGTCAAAAACTGTAAAAAGAGACAAAGAAGGTCATTATATAATGATAAAAGGGTCAATTCATCAAGAGGATATAACAATTGTAAATATATATGCACCCAACATTGGAGCACCTAAATATATAAAGCAAATATTAAAAGATCTGAAGGGAGAGATAGACTGCAATACAATAATAGTAGGGGACTTCAATACCCCACTTTCAACAATGGACAGATCATCCAGACAGAAAATTAATAAGGAAACATTGGACTTGAACTACACTTTAGACCAAATGGACCTAACAGATATATACAGAACATTCCATCCAACAGCAACAGAATACACATTCTTCTCAAGTACACATGGAACATTCTCCAGGATAGATCATATGTTAGGCCACAAAACAAGTCTTAACAAATTTAAGAAGATTGAAATCATATCAAGTATCTTTTCTAACCACAATGGTATAAAACTAGAAATCAATAACAGGAGAAATTTTGGAAAATTCACAAATATATGGAAATTAAACAACATGCTCCTGAACAACCAATGGGTCAAAGAAGAAATAAAAAGGAAAATTAAAAAATATCTTGAGACAAATAAAAATGAAAACAAAAAATACCAAAAATTAATGGAATGCAGCAAAAGCAGTTCTAAAAGGAAAATTTAAAGCAATAAATATCAAAAAAAAGAAGAAAGATCTCAAATAAACAACCTAATATTACACCTCAAGGAACTAGAAAAAAAAGAACAAACTAAGCCCAAAGTTAGCAGAAGGAAGGAAATAATAAAGATCAGAGCAGAAATAAATGAAATAGAGACTAGAAAAACAATAAAAAAAATCAATAAAACTAAGAGTTGGTTTTTTGAAAAGATAAACAAAATTGACAAACCTTTAGCTAGACTAAGAAAAAAAGAAAAAAAACAAATAAATAAAATCAGAAATGAAAGAGGAGACATTACAACTGATACCACAGAAATACAAAGGATCATAAGAGACTACTATGAACAATTATATGCCAACAAATTGGATAACCTAGAAGAAATGGATAAATTCCTAGACACATACAACCTACCAAGACTGAATCATGAAGAAATAGAAAATCTGAACAGACCAATAATGAGTAAGGAGATTGAATCAGTAATAAAAAGTCTCCCATCAAAGAAAAGCCCAGGACCTGATGGCTTCACTGCTGAATTCTACCAAACATTTAAAGAAGAACTAATACCAATCCTTCTCAAACTCTTCCAAAAAATTGAAAAGGAGGGAATACTTCCAAACTCATTTTATAAGGCCAGCATTACCCTGATACCAAAGCCAGACAAGGACACTACAAGAAAAGAAAATTACAGGCCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATTCAACAACACATTAAAAGAATCATTCACCATGATCAAGTGGGATTTATCCCTGGGATGCAAGGATGGTTCAACATATGCAAATCAATAAATGTGATACACCACATTAACAGAATGAAGGACAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCATTTGACAAAATTCAACATCCTTTCATGATAAAAACTCTCAACAAATTAGGTATAGAAGGAATGTACCTCAACACAATAAAGGCCATATATGACAAGCCCACAGCTAACATCATACTCAATGGTGAAAAGTTGAAAGCTTTTCCTCTAAGATCAGGAACAAGACAAGGATGCCCACTCTCACCACTTCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAGAGAAAGAAATAAAAGGCATCCAAATAGGAAAGGAAGAAGTGAAATTGTCTCTGTTTGCTGATGACATGATCTTATATATAGAAAACCCTAAAGACTCCACCAAAAAACTGTTAGAACTAATAAACAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGCATTTCTATACACTAACAACAAACTATCTGAAAAAGAAATTAAGAAAACAATCCCATTTACAATAGCTACAAAAAAAATAAAATACTTAGGAATAAATTTAACCAAGGAGGTGAAAGATCTGTATACTGAAAACTATAAAACATTGATGAAAGAAATTGAAGAAGACACAAATAAATGGAAAGATATCCTATGTTCATGGATTGGAAGAATTAATATTGTTAAAATGTCCATACTACCCAAAGTAATCTACAGATTCAATGCAATCCCTATCAAAATTCCAATGTCATTTTTCACAGAAATAGAAAAAAAAATCCTAAAATTTATATGGAACCACAAAAAACCCAAAATAGCCAAAGCAATCATGAGCAAAAAGAACAAAGCTGGAGGCATCACACTACCTGATTTCAAAATATATTACAAAGCTATAGTAATCAAAACAGCATGGTACTGGCATAAAAATAGACACATTAACCAATGGAACAGAATAGAAAGCCCAGAAATAAACCCACACATTTATAGTCAATTGATTTTTGACAAAGGTGCCAAAAAAAAACAATGGGAAAAAGACAGTCTCTTCAATAAATGGTGTTGGGAAAACTGGATATCCACATGCAGAAGAATGAAATTGGACCCTTATCTCACACCATATACAAAAATCAATTCAAAATGGATTAAAGACTTAAATGTAAGACCTGAAACTGTAAAACTACTAGAAGAAAACATAGGGGAAAAACTCCATGACATTGGTCTGGGCAATGATTTTTTGGATATGACCCCAAAAGCACAGGCAACAAAAGCAAAAATAGACAAATGGGATTGCATTAAAATAAAAAGCTTCTTCAAAACAAAAGAAATCAACAGAGTGAAGAGACAACCTATAGATTGGGAGAAAATATTTGCAAACCATACATCTGATAAGGGGTTAATATCCAAAATATATAAGGAACTCAAACAACTCAATAGAAAGAAAACAAATAACCTAATTAAAAAATGGGCAAAAGACCTGAATAGACATTTCTCAAAAGAAGACATACAAATGGCCAACAGATATATGAAAAAATGCTCAACATCACTAATCATTAGGGAAATGCAAATTAAAACCACAATGAGATATCACCTCACACCTGTTAGAATGGCTATTATCAAAAAGATAAAAGATAACTGTTGGCAAGGATGTGGAGAAAAGGGAACCCTTGTACACTGTTGGTGGAAATGTAAATTAGTAAAACCATTTTTGAAAACTGTATAGAGGTTCCTCAAAAAACTAAAAATAGAATTACCATATGATCCAGCAATCCCACTTCTGGGTATATATCCAAAAGAAAAAAAATCAGTTTTTCAAAGAGATATCTGCACCCCCATGTTCATTGCAGCATTATTCACAATAGCCAAGATATGGAATCAACCTAAGTGTCCATCAATAGATGAATGGATAAAAAAAATGTGGTATATATACACAATGAAATACTATTCAACCTTTAAAAAGAAAGAAATTCTGTCATTTGTAACAACATGGATGAACCTGGAGAACATTATGCTAAGTGAAATAAGCCAGGCACAGAAATACTGCATGTTCTCACTTATAAATCTAAAAAAGTTGAACTCATAGAAGTAGAGAGTAGAATGGTGGTTACCAGAGGCTGGGGGGGGGGGGGGGGAGGGGGATGGGGAATGGGGAGATGTTGGTCAAAGGGTACAAAGTTTCAGTTAGACAGGAGGAATAAGTTTTAGTGATCTATTGCACAGCATGGTGACTATAGTTAATAATAATGTATTGTATATTTCAAAATTGCTAAAAGAGTAGATTTCAAATGTTCTCACCACAAAAAATGTTAAGTATTTGAGGTGATGGATATGTTAATTAGCTTGATTTAATCATTCCACAATGTATACATATATCAAAACATCACATTGTACCCCATAAATATATACAATTATTATTTGTCAATTAAAAATAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA7.ORF1.hs1_chimp.pars,L1MA7.ORF2.hs0_human.marg,1364,2091,2606,6385,6758,373
L1MA8,CAGGCTCCAGGTCTTCCCAGTGCCAGGCTTGTCTCTATGTCTTTACCCTCCAAACCAGTCCTTACACCCTAGTGTTCCAGCAGACTCATAGTTCAAGTAAGTCCCAGTAGACCCAAGCACTGGAGAAGCCAGTCCCCAGGCTTTCCCTCCAGGTCCCAGGACTTTCCCTTTGTGCCCAGGTTCCAGGTCAGCCCCTGAGGCCCTAAGAACCAGGCCACCCTCAGGGACTTAACCTCTCGGTAAGTCCGTACAGAACCATCCTCTAGTCAGCCCCCACTGGAAGACCGATTTAGACAGATATGTGTGCACAAAGATTCCTGGGCAACCCATAAAAGAACCAGGTGAATGACAACAATAATTGATCATGAGGATCTGTCAAAGAACTCGGCAATATGTTGGGCCAGTGGTGCAGGTCATGTTACATTACTCCTCGCTCCCTAGGATCAATAGTGAGGAGTAAACCCAGGAGACCGGAATTCTTGACTTAAGGAAAAAACAGGGTTCAGAGGGACAACTTTGACGATTAAGTCCACAAGGATGCAGCCCTCGGCAAAGTCCCTCGGTACCTGCCAGCGGTGTCCGCTTCCTCCCCGGGTCCGCCCCAGGCTCGCCTCTCGTGACTCACTCACAAGAACCATGCCTCCGACAGGCCCGGCGCTATCAACCCAGGCTTCAGGGTGGCCTCTATACACTCAGCCACTCAGTCCGTTCTTATGGGACAAGGCGGAAGGCCGACACCGCTGCAACCCCAGACTACGCCTCCCCCCGCACATCCAGTATCTACTCCCAACCCTAGGACCTCCAGCTCCCTGCTCCTCCACCTGCCAACGCACCCAGCTGCACGGACTGCCCAAGGTCTCAAACGGCGCGCCCGCTCATGGCACAGCCCATATGCCCTACCCAGCATGTCCCGACCGGCTGACTGGTAAAGGAATTTCCCCGACAAAGCCAGCCCGTGAAGTCTAGAAGAGGTCCTTACTTCTTCAAATGCATAGACATCAATCTAGGGCAACAAGAAACAGGAAAAACAAGGAAAGCGTGACAACACCAAAAGAATAAAATAATCCACCATTGGCGACCCTCTAAATATAGATATATAAACTGCCTGACACAGGATTCAAAATAATTGGTTTAGGGAAGCTCAGTGAACTACAGGAAAAAAAATTAAAAAATTTCAGAAAGATAAGAAAAAAATAACTGGACAAAGTGAAATATTTAAAAAAAAGAAAGAAATAAAAAAAAACAAAAATAAAACTTGAAGAAGTAGAAGAAAAATAATAAAAATTTATTAAGAAAAGAAATAACAAAAAAAAAGAAGAAATGGAAAAGACAATGAAAGGATCAAAAAGAAAAAAGAATGAATCATTGAGGACAAAAAAGGTAGAGTTTAATAAACATGAGAAGAGAAAAAGGAAAAGAAATAAAAAAAAGTAAAAAAAGAACAAATAGTTTATGTAACACAGTATAAAGAGCAAATGTATGAGTTGTTGGAGTTAAAGAGGGAGAGGAGAAAAACAAAGGGGCAAATATATCATTGACAGCAAAGTTGATCAAACAGAAGAAAGAATCTGTGAACTTGAAGACACATTATTTAAAAATATAGCGAGGATTAAAAAGAAAAAGAATAAAAAGGAATAAAAAAACTTTCAGGAACTTATGGGAACAGCATCAAAAGAGCAATTGTTTGAGTTATAAGTGTTTAAATAGTTATCAATTTATAGGGAAAAAAAAAAAAGAAAAGGGGGTAGAAAGCTTATTTAAAGAAATAATAGCAGAAAACTTTCCAAATCTGGAGAAAGATATAAATATCCAGGTACAGGAAGGTCAAAGGTCTCCAATCAGATTCAATCCAAACAAGACTACACCAAGACATATTATAATCAAATTGTCAAAAATCAAAGACAAAGAGAAAATCTTGAAAGCAGCAAGAGAAAAGAAGCAAATAACATATAAGGGAGTTCCAATAAGGCTAACAGCAAATTTTTCAGCAGAAAACTTACAGGCCAGGAGAGAGTGGGATGATATATTCAAAGTGCTGAAGGAAAAAAATTGCCAACCAAGAATACTGTACCCAGCAAAGTTGTCCTTCAGAAATGAAGGAGAAATAAAGACTTTCCCAGACAAACAAAAGCTGAGGGAGTTCATCACCACCAGACCTGTCTTACAAGAAATGCTAAAGGGAGTTCTTCAAGCTGAAAGAGAAAGGAGGCAAGTTAGCAAATTAGTAACACAAAAACATATGAAAATATAAAACTCACTGGTAAAAGTAAGTACACGGCCAAATTGAATACTCTAATACTGTAATGGTGGTGTGTAAATCACTTATATCTTTAGTATGAAGGTTAAAAGACAAAACTATTAAAAATAATAAAGGCAAAATTAATTTGTTAGGGCATACATAATTTACAGGAACAGCTACAGTGAATTCCTCAATCTATAATAATTTGTTAAGAGATATACAATATAAAAAGATGTAAATTGTGACATCAAAAACATAAAATGTGGGGGGGGGGGTGGAAAGAAAAGGTAGAGATTTTAGAATGTAAGGCATAAAGTGTAGAGTTTTTTTATGTAATCAAAGTTAAGTTGTTATCAGCTTAAAATAGCCTGTTATAACTATAAGATGTTTTATGTAAGCCTCATGGTAACCACAAAGCAAAAACCTATAGTAGATACACAAAAGATAAAAAGTAAGGAATCAACACACCACTAGAGAAAATCACCTAATCACAAAGGAAGACAGCAAGAGAGGAAGAAAGAAAAAAAAAAGATCCACAAAACAACCAGAAAACAATTAACAAATAGTAAATCCTTACCTATCATTAATTACCTTGAATGTAAATGGATTAAATTCTCCAATCAAAAGACATAGAGTGGCTGAATGGATTAAAAAAAAAAAACCAAAATTATACTCCCTACAAGAGACTCACTTCACATTTAAGGACACACATAGACTGAAAGTGAAGGGATGGAAAAAAATATTCCATGCAAATAGAAACCAAAAGAGAGCAGGAGTAGCTATACTTATATCAGATAAAATAGACTTTAAGTCAAAAACTGTAAAAAGAGACAAAGAAGGTCATTATATAATAATAAAGGGATCAATTCATCAAGAAGATATAACAATTATAAATATATATGCACCCAACATTAGAGCACCTAAATATATAAAGCAAATATTAATAGATCTGAAGGGAGAGATAGACTGCAATACAATAATAGTAGGGGACTTTAATAACCCACTTTCAACAATGGACAGATCATCCAGACAGAAAATCAATAAGGAAACATTAGACTTAAACTACACTTTAGACCAAATGGACCTAACAGACATATACAGAACATTCCATCCAACAGCTGCAGAATACACATTCTTCTCAACTGCACATGGAACATTCTCCAGGATAGATCATATGTTAGGCCACAAAACAAGTCTTAACAAATTTAAGAAGATTGAAATTATATCAAGTATCTTTTCTGACCACAATGGTATAAAACTAGAAATCAATAACAGGAGGAATTTTAGAAAATTCACAAATACATGGAAATTAAACAACATGCTCCTGAACAACCAATGGGTCAAAAAAAAAATTAAAAGGAAAATTAAAAAATTTCTTGAGACAAAAAAAAATGGAAACACAACATACCAAAACTTATGGGATACAGCAAAAGCAGTTCTAAGAGGGAAGTTTATAGCAATAAATACCTACATAAAAAAAAAAAAAAAAAATCAAATAAACAACCTAATATTACACCTCAAGGAACTAGAAAAAGAAGAACAAACTAAGCCCAAAGTTAGTAGAAGGAAGGAAATAATAAAGATCAGAGCAGAAATAAATGAAATAGAGACTAGAAAAACAATAGAAAAAATCAAAAAAACTAAGAGTTGGTTTTTTGAAAAGATAAACAAAATTAACAAACCTTTAGCTAGACTAAGAAAAAAAAAAAAAAAGACTCAAATAAATAAAATCAGAAATGAAAAAGGAGACATTACAACTGATACCACAGAAATACAAAAGATCATAAGAGACTATTATGAACAATTATATACCAACAAATTGGATAACCTAGAAGAAATGGATAAATTCCTAGACACATACAACCTACCAAGACTGAATTATGAAGAAATAGAAAATCTGAACAGACCAATAATAAGTAAGGAGATTGAATCAGTAATAAAAAGTCTCCCATCAAAGAAAAGCCCAGGACCTGATGGCTTCACTGCTGAATTCTACCAAACATTTAAAGAAGAACTAATACCAATTCTTCTCAAACTCTTCCAAAAAATTGAAGAGGAGGGAATACTTCCAAACTCATTTTACAAGGCCAGCATTACCCTGATACCAAAGCCAGACAAGGACACTACAAAAAAAAAAAATTACAGGCCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATTCAACAGCACATTAAAAAAATCATTCACCATGATCAAGTGGGATTTATCCCAGGGATGCAAGGATGGTTCAACATATGCAAATCAATAAATGTGATACATCACATTAACAGAATGAAGGACAAAAACCATATGATCATTTCAATAGATGCAGAAAAAGCATTTGACAAAATTCAACATCCTTTCATGATAAAAACTCTCAACAAATTAGGTATAGAAGGAATGTACCTCAACACAATAAAGGCCATATATGACAAACCCACAGCTAACATCATACTCAATGGGGAAAAGTTGAAAGCTTTTCCTCTAAGATCTGGAACAAGACAAGGATGCCCACTCTTACCACTTCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAGAGAAAGAAATAAAAGGCATCCAAATTGGAAAGGAAGAAGTTAAATTGTCTCTGTTTGCAGATGACATGATCTTATATATAGAAAACCCTAAAGACTCCACCAAAAAACTGTTAGAACTAATAAATAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTAGTATTTCTATACACTAACAACAAACTATCTAAAAAAGAAATCAAGAAAACAATCCCATTTATAATAACTACAAAAATAAAATACTTAGGAATAAATTTAACCAAGGAGGTGAAAGATCTGTACACTGAAAACTATAAAACATTGATGAAAGAAATTGAAGAAGACACAAATAAAAAGATATTCTATGTTTATTGATTGGAAGAATTAAATTTTGTTAAAATTTCCATATTACCCAAAGTGATCTACAGATTCAATGCAATCCCTATCAAAATTCCAATGACATTTTTCACAGAAATAGAAAAAAAAATTCTAAAATTTTTATGGAACCAAAAAACCCCCAAAATAGCCAAAGCAATCTTGAGCAAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAAATATACTACAAAGCTATAGTAATCAAAACAGCATGGTACTGGCATAAAAACAGACACATAGACCAATGGAACAGAATAGAGAGCCCAGAAATAAATCCACACATTTATAGTCAACTGATTTTTGACAAAGGTGCCAAGAACACACACAATGGAGAAAGGAGAATCTCTTCAATAAATGGTGTTGGGAAAACTATATATATACACATGCAAAAAAATAAAATTAGACCTTTATTTCACACAAAATAAAAAATTAACTCAAAATGGATTAAAGACTTAAATGTAAGACCTGAAACTATAAAACTACTAGAAGAAAACATAGGGGAAAAGCTCCATGACATTGGTCTGGGCAATGATTTTTTGGATATGACCCCAAAAGCACAGGCAAAAAAAGCAAAAATAGACAAATGGGATTACATCAAACTAAAAAGCTTCTGCACAGCAAAGGAAACAATCAACAGAGTGAAGAGACAACCTAAGAAATGGGAGAAAATATTTGCAAACCATACATCTGATAAGGGGTTAATATCCAAAATATATAAGGAACTCAAACAACTCAATAGCAAAAAAACAAATAACCTAATTAAAAAATGGGCAAAAGACCTGAATAGACATTTTTCAAAAGAAGACATACAAATGGCCAACAGGTATATGAAAAAATGCTCAACATCACTAATCATCAGGGAAATGCAAATTAAAACCACAATGAGATATCACCTCACACCTGTTAGAATGGCTATTATCAAAAAGACAAAAGATAACAAATGTTTTGGAGAGGATGGGGAAAAAAGAAAACTTTTAAACACTTTGGGGGGAAATGTAAAAATTAGTACAGCCATTATGAAAAAAAGTATGAAGTTTCTTAAAAAATTAAAAATAGAACTACCATATGATCCAGCAATCCCACTACTGGGTATATTTTCAAAAGAAATTAAAATCAGTATTTTGAAAAGATATATCCGCTCTCATGTTTATTGCGCAATATTTTACAAAATAGCAAATATATGGAATCAACCTAAGTGTCCATCAATAGATGAATGGATAAAGAAAATGTGGTATATATACACAATGGAATACTATTCAGCCATAAAAAAGAAGAAAATCCTGTCATTTGCAACAACATGGATGAACCTGGAGGACATTATGTTAAGTGAAATAAGCCAGGCACAGAAAGACAAATACTACATGATCTCACTTATATATGGAAATCTAAAAAGTTGAACTCATAGAAGCAGAGAGTAGAATGGTGGTTACCAGGGGCTGGGGGGGGGGGGGGTTGGGGAGATGTTGGTCAAAGGATACAAAATTTCAGTTAGACAGGAGGAATAAGTTCAAGAGATCTATTGTACAACATGGTGACTATAGTTTAACAATGTATTGTATTCTTGAAAATTGCTAAGAGAGTAGATTTTAGTGTTCTCACCACAAAAAAGATAAGTATGTGAGGTAATGCATATGTTAATTAGCTTGATTTAGCCATTCCACAATGTATACATATTTCAAAACATCATGTTGTACACCATAAATATATACAATTTTTATTTGTCAATTAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA8.ORF1.hs6_sqmonkey.marg,L1MA8.ORF2.hs0_human.marg,1525,2200,2802,6617,6967,350
L1MA9,AATGTTAGCAAGTTGGCAAAATAAAAGTCCCCTGCCCTTTTTCCCCCCAAAGAAACACACATCTACATTTTGTCCCAAATACCTAAAGAAGATTACGAGAACTGCAGAATACACTCGAAAAATCACAGAAATCCAAGATGGTAAAAAAGACAAAAAAAGACAAAGCCTAAACTCTGCCACCCCAAGTCCCACTTTACCCACAGCTCCCCACCGCCGCAGACACCTTGGCTTAGTACCGGGAGGGACCCGCTCACTCCCAGCTCCCCCCAGCGGATAGAACAGTTTGCGTATCGCATCAACCCTTACCACCACCATGAGGAATGCTGGCTTTCACGCCTGACCCCTACAGTCATCACAGATAACATGAGAACAGTAGGTGTAAGTATCCTGCAGATATTTAAGAGTAGAAAAAAGAAAGATAGGCTCACAGACACCAGAGAACAGAACTTAAAATAATATGTTAAAATATTAACATAAAATAATAATAATAATAATAAAAGAACCAAAATAATATATCAAAAGAACTTTAAAAAAGAGCCAAGAACTCCACCAAAAGATTCACTTATAAAGCTTGTCTTCTGAATCCCTCGCAGATTTTATCCACTTCCCCACGTACTCACAGACCATTTAGGGTTTTATTTCTTGAGAAGATTTTATTAGGGGATCGAAAGCCCAGAGTTTGCGAGAGTTCTATTTGTGCCCGCTGAGCTATTACATCAGACCCAGCGAGGGCTCCGCCGTCCCTTAGTCGGACAGGTGGCCGGAGCTTCTCCACCGACCGCTTGGCAGGCCGAATGCACACCTGCTAACGACTCCACCCTTTCTAAGTCACCCTAAGAGGCCAGCTTGGAAACTCTGCCCGGACCTCGCAGCGGCCAACAATCGTTGCCCTAGAGGTGTGAGAGACGGAGCACTGTTGTGGCAGACGTGCCATCCTAGCCTCTGCCCTCTGCAATCCGAAACCTGCCCCCCCCCTTTCCCTGCTCCACGCAGTACATCTTGGATCACCCGCATCTGACCTTCCCTGGTGCTTCGGTTCCCCACAGTTGGGCGTTAAGTGAACCGGATTTCGCATTGGGGATGCAGGCGCAGCTACAGTTCTCTCGGGACCCCAGCAGAGTGGTACTGGCTTCATGGACATCCCCTACCCCTCGGGAATCATTGCCCCTGCAACCGTTTGGCGGCAAGGGTCCTGGGGCCGAGACGAGCTGGTACCGGGCACGCCGGGGGTCTGCAGTGATTGGCGAGCTGGACCCTTCAGTCCTACTGTCTGAGCAGCATCGTCGCACAATCCTCTGAGTGCGCTCGCTCCTGGGGGCCAGGGGCCCGAGAGTGCTTCCAGCCCTTGGCGTCTTAGGGTGAGGCTGTTTTGCCCCCTCCTCCCTGCAGGAAACTAAGCTTCGACTGCTTGCCGTTCCAGCGTTGCTGCTTCCTAGGCACCGTGCCTCCCACCTCCTGGGATACACCTCTGACCGCGCAGTCAGGGGTCTAGCCGGTTATCTGTCTGCCTCCTCCCCCCCGGGGGCAGAGCGGGGGGTCAGGACAGGCGCCCCCAGCCTTGGGGTTGGAGACTTCAGTGGCCCCCTGGCTTCCCAGCGGTGCCCGCAGCCGTCGCTGCCCCGGCGCCCCTCAGTCCCTGCCCGGGCCTTGCTGCCCCGGGTGGAGGGACCGCCCACTAGCGTCCCGGCGCCAGACCCCGCCCCGCATCCCCCAGGCCCACAGCGCATCCACCCCCCGGCACCCCTCCCCACATCCCTGCTGGCGGCTCCCGCAGGTTCTGGCCCCGCCCCCCCCTGTCACCCAGGCCCGCTCCTCGTGAGTGCCCATACAGGGGGGGACTGCAAGCACCCCGCACCGGCACCCTGCCTATGGATGCTAGACTAAAAGCCACCACTCCTGGACCCCCCAGGCCGCGCCCCCAAGGCTATCACGGTCGTTACTGATCCTGCCCTGACGTGAGAAGGCGGCACACAGTCTGCTGCTCTGCCCCCCCAGCGGCAATGAGACCAGTGAACCCCGCCAGCCAGCACACAAAGTCTGAGAGCTCCTAAGATCCTCTCGGGATGCCGGGAGGGGGGTTTCCCTCCTGAAGCCAGTCTGTAAAGACTGGAAGAGGTGACTGCTTCTTCAAATGCGCAGACATCAATGCAAGGACACAAGAAACATGAAAAACAAGGAAACATGACACCACCAAAGGAACAAAATAATTTCCAGTTACCAACCCCCAAGAAATGGAGATCTATGAATTGCCTGACAAAGAATTCAAAATAATTATTTAAGGAAGCTCAGTGAGCTACAAGAGAACACAGATAGACAACTCAATAAAATCAGGAAAACAATACATGAACAAAATGAGAAGTTCAACAAAGAGATAGAAAATATTAAAAAAAAAACCAAACAGAAATTCTGGAGCTGAAGAATACAATGACTGAACTAAAATATTCAATAGAGCCGCATTCTGGAGCTGAAAAATACAATGAGTGAAATGAAAAGAGCAATAGAGAGCTTCAACAGCAGACTTGATCAAACAGAAGAAAGAATGTCTGAAATGGAAATTTATAAATTGCGTAAAAAGTCATTTAAAATAATGATAATAATGGAACTGAATAAGACAATAAAAGAAATAAAAAATTCATTCGATAAAATCAACAACACAATTGATCAAGTAGAAGAAAGAATTTATGAACTAGAAGATAGGTCATTTAAAATGACTAAGTTAAAGGAAAAACAAAAAAAAAAAAAAATAAAAAAAATTAAAAAAACCTACAGGACTTATGGGACACCATTAAGTGAACAAAAATTCACATTTATAGGAATTCAAGAAAGAAAAAAGGGGATAGAAAGCTTATTTAAAGAAATAATGGCTGAAAACTTCCCAAGTCTGGGAAGAGAAATGGACATCCAGATCCATGAAGCTCAAAGATCCCCAAATAGATTCAACCCAAAGAGGTCTTCTCTGAGACACATTATAATCAAATTGTCAAAAGTCAAAGACAAAGAGAAAATTTTAAAAGCAGCAAGAGAAAAGCATCTAATCACATATAAGGAAATCTCCATTAGACTATCAGTGGATTTCTCAGCAGAAACCTTGCAGGCCAGGAGAGAATGGGATAATATATTCAAAGTGCTGAAAGAAAAAAACTGCCAACCAAGAATACTATACCCAGCAAAGCTGTCCTTCAGAAATGAAGGAGAAATAAAGTCTTTCCCAGACAAGCAAAAGCTGAGGGAATTCATTACCACTAGACCTGCCTTACAAGAAATGCTTAAGGAAGTTCTTCAAGTAGAAAACAAAAGGATGCTAATTAGCAACATGAAAACATATGAAAGTATAAAACTCATGGTAAAGGTAAGTATATAGTCAAATTCAGAATACTCTAATACTGTAATGGTGGTGTGTAAATCACTTTTAACTCTAGTATAAAGGTTAAAAGACAAAAGTATTAAAAATAACTATAGCTACAATAATTTGTTAATGGATACACAATATAAAAAGATGTAAATTGTGACATCAATAACATAAAATGTGGTGGGGGGGGGGGAAGTAAAAGTGTAGAGTTTTTGTATGTGATTGAAGTTAAGTTGTTATCAGCTTAAAATAGACTGTTATAACTTAAGATGTTTTATGTAAGCCTCATGGTAACCACAAGGAAAAAACCTGTAGTAGATACACAAAAGATAAAGAGAAGGAATCAAAGCATACCACTACAGAAAAATCATCAAATCACAAAGGAAGACAGCAAGAGAGGAAGAAAGGAACAAAGGAACTACAAAACAGTCAGAAAACAATTAACAAAATGGCAATAGTAAGTCCTTACCTATCAATAATTACTTTAAATGTAAATGGATTAAATTCTCCAACTGGCAGTAGTAAGTTCTTACCTATCAATAATTACTTTAAATGTAAATGGATTAAATTCTCCAATCAAAAGACATAGAGTGGCTGAATGGATTAAAAAAAAAAACCCAACTATATGCTGCCTACAAGAGACTCACTTTAGCTTTAAGGACACACATAGGCTGAAAGTGAAGGGATGGAAAAAAATATTTCATGCAAATGGAAACCAAAAGAGAGCAGGGGTGGCTATACTTATATCAGACAAAATAGACTTTAAGTCAAAAACTGTAAAAAGAGACAAAGAAGGTCATTATATAATGATAAAGGGGTCAATTCATCAAGAGGATATAACAATTGTAAATATATATGCACCCAACATTGGAGCACCTAAATATATAAAGCAAATATTAACAGAACTGAAGGGAGAAATAGACAGCAATACAATAATAGTAGGGGACTTCAATACCCCACTTTCAACAATGGATAGATCATCCAGACAGAAAATCAATAAGGAAACAGTGGACTTGAACAACACTATAGACCAAATGGACCTAACAGACATATACAGAACATTCCATCCAACAGCAGCAGAATACACATTCTTCTCAAGTACACATAGAACATTCTCCAGGATAGATCATATGTTAGGCCACAAAACAAGTCTTAACAAATTTAAGAAGATTGAAATCATATCAAGTATCTTTTCTGACCACAATGGTATGAAACTAGAAATCAATAACAGGAGGAAAATTGGAAAATTCACAAATATGTGGAAATTAAACAACACACTCCTGAACAACCAATGGGTCAAAAAAAAAATAAAAAAAAGAAAATTAAAAAATATTTTGAGACAAATAAAAATGAAAACAAAACATACAAAAACTAGGGATGCAGCAAAAGCAGTTCTAAGAGGGAAGTTTATAGCAATAAATGCCTACATTAAGAAAAAAGAAAGATCTCAAATAAACAACCTAACTTTACACCTCAAGGAACTAGAAAAAGAAGAACAAACTAAGCCCAAAGTTAGCAGAAGGAAGGAAATAATAAAGATCAGAGCAGAAATAAATGAAATAGAGACTAGAAAAACAATAGAAAAGATCAATAAAACTAAGAGTTTGTTTTTTGAAAAGATAAACAAAATTGACAAACCTTTAGCTAGACTAAGAAAAAAAAAAGAGAAAACACAAATAAATAAAATTATAAATGAAAGAGGAGACATTACAACTGATACCACAGAAATACAAAGGATCATAAGAGACTACTATGAACAATTATATGCCAAAAAATTGGATAACCTAGAAAAAATGGATAAATTCCTAGAAACATACAACCTACCAAGACTGAATCATGAAGAAATAGAAAATCTGAACAGACCAATAATAAGTAAGGAGATTGAATCAGTAATCAAAAACCTCCCAACAAAGAAAAGCCCAGGACCTGATGGCTTCACTGGTGAATTCTACCAAACATTTAAAGAAGAATTAATACCAATCCTTCTCAAACTCTTCCAAAAAATTGAAGAGGAGGAAACACTTCCAAACTCATTTTATAAGGCCAGCATTACCCTGATACCAAAGCCAGACAAGGACACTACAAGAAAAGAAAATTACAGGCCAATATCCCTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACCAAATTCAACAGCACATTAAAAGGATCATACACCATGATCAAGTGGGATTTATCCCTGGGATGCAAGGATGGTTCAACATATACAAATCAATAAATGTGATACACCACATTAACAGAATGAAGGATAAAAATCATATGATCATCTCAATAGATGCAGAAAAAGCATTTGACAAAATTCAACATCCTTTCATGATAAAAACTCTCAACAAATTAGGTATAGAAGGAATGTACCTCAACATAATAAAGGCCATATATGACAAGCCCACAGCTAACATCATACTCAATGGTGAAAAGCTGAAAGCTTTTCCTCTAAGATCAGGAACAAGACAAGGATGCCCACTCTCACCACTTCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAGAAAAAGAAATAAAAGACATCCAAATTAGAAAGGAAGAAGTAAAATTGTCTCTGTTTGCAGATGACATGATCTTATATATAGAAAACCCTAAAGACTCCACCAAAAAACTTTTAGAAATAAATAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTTGTATTTCTATACACTAACAATGAACTATCCAAAAAAGAAATTAAGAAAACAATTCCATTTAAAATAGCAACAAAAAAAATAAAATACTTAGGAATAAATTTAACCAAGGAGGTAAAAGATCTGTACACTGAAAACTATAAAACATTGATGAAAGAAATTGAAGAAGACACAAATAAAAATAAAAAGATATCCTATGTTCATGGATTGGAAGAATTAATATTGTTAAAATGTCCATACTACCCAAAAGTAATCTACAGATTCAATGCAATCCCTATCAAAATTCCAATGGCATTTTTCACAGAAATAGAAAAAAAAATTCTAAAATTTATATGGAACCACAAAAGACCCCAAATAGCCAAAGCAATCTTGAGCAAAAAGAACAAAGCTGGAGGCATCACACTTCCTGATTTCAAAATATATTACAAAGCTATAGTAATCAAAACAGTATGGTACTGGCATAAAAACAGACATATAGATCAATGGAACAAAATAGAGAGCCCAGAAATAAACCCACACATATATGGTCAACTAATCTTTGACAAAGGTGCCAAGAAAACACAAAATGGGGAAAGGATAGTCTCTTCAATAAATGGTGTTGGGAAAAATGGATATTCACATGCAAAAAAAAAAAAATTGGACCCTTTTCTTACACCATACACAAAAATCAACTCAAAATGGATTAAAGACTTAAATATAAGACCTGAAACTATAAAACTCCTAGAAGAAAACATAGGGGAAAAGCTCCTTGACATTGGTCTTGGCAATGATTTTTTGGATATGACACCAAAAGCACAGGCAAAAAAAGCAAAAATAAAAAAATTGGATTACATCAAACTAAAAAGCTTCTGCACAGCAAAGGAAACAATCAACAAAATGAAAAGGCAACCTATAGAATGGGAGAAAATATTTGCAAACCATATATCTGATAAGGGGTTAATATCCAAAATATATAAGGAACTCATACAACTCAATAGCAAAAAAAAAAATAACCTGATTAAAAAATGGGCAAAGGACCTGAATAGACATTTTTCAAAAGAAGACATACAAATGGCCAACAGGTATATGAAAAAGTGCTCAACATCACTAATCATCAGGGAAATGCAAATCAAAACCACAATAAGATATCACCTCACACCTGTTAGAATGGCTATTATCAAAAAGACAAAAGATAACAAGTGTTGGGAAGAGGTGTGGAAAAGGGAACCCTTTTCACCTTTTTGGTGGAAATGTAAATTGGTACAGCCATTATGAAAAACAGTATGGAGGTTCCTCAAAAAATTAAAAATAGAACTACCATATGATCCAGCAATCCCACTTCTGGGTATATATCCAAAGGAAATGAAATTATCAATATCTAAAAGAGATATCTACACCCCCATGTTCATTGCAGCATTATTCACAATAGACAAGATATGGAAACAACCTAAATGTCCATCGATAGATGAATGGATAAAGAAAATGTTATATTTATATATAGGGATACTATTGAGCCTTAAAAAAGAGGGAAATCCTGTCATTTGTGAAAACACATACAATGTGTTATATATATATACAATGGAATATTATTTAACTTTAAAAAAGAAAAAAAAGGAAATCCTGCCATTTGCAACAACATGGATGAACCTGGAGGACATTATGCTAAGTGAAATAAGCCAGACACAGAAAGACAAATACTGCATGATCTCACTTATAAATCTAAAAAAGTTGAACTCATAGAAGCAGAGAGTAGAATGGTGGTTGCCAGGGGCTGGGGGGGGGGGGAAATGGGGAGATGTTGGTCAAAGGGTACAAAGTTTCAGTTATAAGATGAATAAGTTCTGGAGATCTAATGTACAGCATGGTGACTATAGTTAATAATACTGTATTGTATACTTGAAATTTGCTAAGAGAGTAGATCTTAAGTGTTCTCACCACACACACACACAAAAACAAATAAAAAGACAAAAAAATGGTAACTATGTGAGGTGATGGATATGTTAATTAGCTTGATTGTGGTAATCATTTCACAATGTATATGTATATCAAAACATCATGTTGTACACCTTAAATATATACAATTTTTATTTGTCAATTATACCTCAATAAAGCTGGAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA9.ORF1.hs3_orang.marg,L1MA9.ORF2.hs4_gibbon.marg,2453,3289,3862,7764,8165,401
L1MB1,GAGTTCCGCAAGCTGGCAGAGTGGGAAGCCCTAGATTCTCCTTCCCTTCACAAACACACCGATTGAGCAACAATTCATGGACAAATTCCCTTTTTAAGAAATTCAGAAACTAATTGAAAGGCTCCTGCACCCTTGATGAGTGTGAAACCAGACTCATCAAAGCTGATAGGGAAATTCAAGACACCCTCTCACCAGAATCTCTACCCCTGGCACAGTTCCATACAATAGGGACGAGACCCCTCATCCCTCAGCTTCTCTGAGGAGAAGGAAAGGGGTATTAACTAGGTTCAACGCTCTACCTTTTTCTGGGGGTACCCAGAGGACTGGGCTCTCCCTAGCCTGCGTTGGGGTCCTACGCGGACTGGTCTAAGCCTGCAGGCTAAAGGGGAAGAGGGATTGTGGTTTGGAACTGGTGGACCCCATAGACCCCCCCCCTGGCTCGGCATAAATCAGAGGGATGAAAAACCCCAGCTCTTAGCTTCTCCCTGGGGAGGAAAAGAGTTGGACAACGGATCCAATGACCCAACTTTTCGGGGGACATCCGAAGAAATTGCATTCAGCTCCTCTATCCTGGAACTCTGGTGGGGTCGGTACAGGCCTGGACAGGTGAGGAGGACAGAAGCATTGGCTTTGAATACTCTAACTTACCCACATCTCACAACTCGACATCTAGGAAAGCCAGGGTAACCCCAGCGTCCGGCGGCTCTATGGGTAGGAAAAAAGGTTTGGGAGGACTCCAGAATCTCTAGCCAGGCTGATTGGTGAAGGTCTTTTTCTGTACAAGGCCAGTCTGTGAAGTCTGGGAAGAGTGTTTTTTTTCTTTTGCAGAAAGTGGACGACACAAAGTGCCAAAGAAAATGAAAAATCAGGCAAAGATGTTCCAAATAAAGGAACAAAATAAATCTCCAGAAACCAACCCTAACGAAATAGAGATATATAATTTACCTGACAGAGAATTCAAAATAACTGTCATAAAGTGTTTCATGGGGGCAAATGAGGAGAAACCAGAACACAAACGCTGAAAATTCGAAAAACCAGAGCGCTTCTTCTCCTCCAAAAGATCACACTTGCTCGCCAGCAATGGATCCAAACTGGACGCAAGAAGAAATCGCTGAATTGCCAGAAAAAGACTTCAGAAGGTTAGTTATTAAGCTATTCACGGAGCTACCAGAGAAAGGTGAAACCCAACGCAAGGAAATTAAAAAACTTAAAATAAAGGTTATGGATGAAATATTCACTAGAATAAAAAGTTTAGAGAAAAACCAAAAAGAACTTTTGGAGCTGAAAAGCACACTAATAAAAATACAAAATTCACTCAAAGGATTCAAAAGCAGATTTGATCAGGCACAGACTAGATTAAATAGAGAAAAAAGAATCAGAAAACTGAAAGACAAAGTATTTGAAATTATCCAGTCAGAGGAGCAAAAAGAAAAAAAAATGAAAAATAAAGAAGAAAGCCTAAGGGACTTATGGGAGTTCATAAAACACACTAAAATATACACAATAGGAGTCCAAGAGAGCCAGAGAAAGAAAGGAAAAAAGGTAGAAAACTTATTTAAAGAAATAATGGCTAAAAACTTCCCAAATCTGGGGAAAAAAAAAGAAATCCAAATTCAAGAAACCCAAAGAAACCCAAAAAAAATGAACTCAAAGAAATCCACACCAAGACACATTATAATCAAATTGTCAAAAGTCAAAGACAAAGAGAGAATTTTGAAAGCAGCAAGAGAAAAGCATCATGTTACATACAAGGGGAAATCCATAAGAATAACAGAAGATTTCTCAGCAGAAATCTTGCAAGCCAGAAGGAAGTGGGATGATATATTCAAAGTGCTGAAAGAAAAAAAATTCCAACCAAAAAAAATTATTCAAGCAAAACTGTCATTCAAAAATAAAAGAGAAATAAAGACTTTCCCAGACAAACAAAAGCTAAGGGAGTTCATCACCACTAGACCTGCCTTACAAGAAATGCTAAAGGGAGTTCTTCAAGTTGAAAATAAAAGGATGCTAAACAGCAACACAATAGCATAAGAAAGTATGAAGCTCATTGGTAAAGGTAAATATATAGACAAATACAGAATACTGTATTACTGTAATAGTGGTGTGTAAATCACTTTTAATTCTGGTATAAAATTTAAAAGAAAAAATATTTTAAATAAATATAAATAAAAATATGTTAAAAGATACACAATATAAATAGATGTAAATTGTGACAATAATATCATAAAGTATATGTGTGGGGGGGGGAAGGGTAAATGTGTAGAGTTTTTGTATGTGATTGAAGTTAAGTTGTTATCAGCTTAAAATAGACTGTTATAACTATAAGATATTTTATGTAAGCCCCATGGTAACCACAAAAAAAATACCTATAGAAGTTACACAAAAGAAAAAAAAAAAAAAATAAAAGCATAGCATTACAAAAAAAAAAACAATAAAACACAAAGGAAGACAGCAAAAGAGGAAAAGAGAGCCAAAAAAACTATAAGACAGACAGAAAACAATTAACAAATGACAAGAACAAATTCATCCCTATCAATAATTACTTTAAATATAAATGGACTAAACTCCCCAATCAAAAGACATAGAGTGGCTGAATGGATAAAAAAACAAAGACCCAACTATATACTCTCTATAAGAAACTCACTTTAGATTTAAGGACACACATAGGCTGAAAGTGAAGGAATGGAAAAAGATATTCCATGCAAATGGTAACCAAAAGAGAGCAGGGGTGGCTATATTTATATCAGACAAAATAGACTTTAAGTCAAAAACTGTCACAAGAGACAAAGAAGGACATTATATAATGATAAAAGGGTCAATTCACCAGGAAGATATAACAATTATAAATATATATGCACCCAACATCAGAGCACCTAAATATATAAAGCAAACATTGACAGAACTGAAGGGAGAAATAGACAGCAATACAATAATAGTAGGAGATTTCAATACTCCACTTTCAATAATAGACAGAACATCCAGACAGAAGATCAATAAGGAAACAGAGGACTTGAACAACACTATAGACCAAATGGACCTAACAGACATATACAGAACATTCCACCCAACAGCAGCAGAATACACATTCTTCTCAAGTGCACATAGAACTTTCTCCAGGATAGATCACATGTTAGGTCACAAAACAAGTCTTAACAAATTTAAAAAAATTGAAATCATACCAAGTATCTTTTCTAACCACAATGGAATGAAACTAGAAATCAATAGCAGAAGGAAAACTGGAAAATTCACAAATATAAAGAAATTAAACAACATACTCTTGAACAACCATTGGGTAAAAAAAGAAATCAAAAAGGAAATTAGAAAATATCTTAAAACAAATGAAAACAAAAACACAACATACCAAAACTTATGGGATGCAGCAAAAGCAGTACTAAGAGGGAAGTTTATAGTGATAAATGCCTACATTAAAAAAGAAAAAATATCTCAAATAAACCTAACTTTATACCTCAAGGAACTAGAAAAAAAAAAACAAACTAAGCCCAAAGTTAGCAGAAGGAAGGAAATAACAAAGATTAGAGCAGAAATAAATAAAATAGAAAATAGAAAAACAAATAGAAAAAAAACAAATAAACTAAAAATTTGTTTTTTTAAAAAAATAAACAAAATTGACAAACTTTTAGCTAGACTAACTAAAAAAAAAAAAGAAAAACAAAAAATAAATAAAATAAGAAATGAAAGAGGAGACATTACAACTGATGCCACAGAAATAAAAAAGATCATAAGAGACTATTATGAACAATTATATACCAACAAATTGGATAACCTAGAAGAAATGAATAAATTCCTAGAAACATACAACCTACCAAAACTAAATCATGAAGAAATAGAAAATCTGAACAGACCTATAACTAGTAAGGAGATTGAATCAGTAATCAAAAACCTCCCAACAAAGAAAAGCCCAGGACCAGATGGCTTCACTGGTGAATTCTACCAAACATTTAAAGAAAAATTAATACCAATTCTTCTCAAACTCTTCCAAAAAATTGAAGAGGAGAGAACACTTCCAAACTCATTTTATGAGGCCAGCATTACCCTGATACCAAAGCCAGAAAAAGACACCACAAGAAAAGAAAACTACAGGCCAATATCCCTGATGAATATAGATGCAAAAATCCTCAACAAAATACTAGCAAACAAATTTAACAACACATTAAAAAGATTATACACCATGACCAAGTGGGATTTATTCCTTGGATGCAAGGATGGGTCAACATTAAAAAATCAATTAATGTGATATACCACATTAACAGAATAAAGGATAAAAATCACATGATTATCTCAATAGATGCAGAAAAAGCATTTGACAAAATTCAACATCCTTTCATGATAAAAACTCTCAACAAACTAGGAATAGAAGGAAATTACCTCAACATAATAAAGGCCATATATGAAAAGCCCACAGCTAACATCATACTCAATGGTGAAAAACTGAAAGCTTTTCCTCTAAAATCAGGAACAAGGCAAGGATGCCCACTTTCACCACTTCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAGAAAAAGAAATAAAAGGCATCCAAATCAGAAAGGAAGAAGTAAAATTTTCTCTGTTTGCAGATGACATGATCTTATATATAGAAAACCCTAAAGACTCCATAAAAAAACTGTTAAAACTAATAAATAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATTAGTTTTGTTTTTATATACTAAAAAAAAACAATATGAAAAAAAAATAAAAAAAAAAATCCCATTTACAATAACAACAAAAAGAATAAAATACTTAGGAAACTTAACTAAGGAGGTGAAAGACTTGTATATTGAAAACTATAAAACATTGATGAAAGAAATTAAAGAAGACACAAATAAATGGAAAAACATCCTTTTTCATTGAATTGGAAGACTTAATATTGTTAAAATGTCCATACTACCCAAAGTAATCTACAGATTCAATGCAATCCCTATCAAAATCCCAATGGCATTTTTTACAGAAATAGAAAAAAAAATTCTAAAATTTATATGGAAAACAAAAAGAACCCTAAAAACCAAAACAATCTTGAGAAAGAAGAACAAAGCTGGAGGCATCACACTTCCTGATTTCAAAATATATTACAAAGCTACAGTAATCAAAACAGTATGGTACTGGCATAAAGACAGACATATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAATCCACACATATATGGTCAACTGATCTTTGACAAGGGTGCCAAGAATACACAATGGGGAAAGGATAGTCTCTTCAACAAATGGTGTTGGGAAAACTGGATATCCACATGCAAAAGAATGAAATTGGACCTTTATCTTACACCATACACAAAAATCAACTCAAAATGGATTAAAGACTTAAATATAAGACCTGAAACTGTAAAACTCCTAGAAGAAAACATAGAGGAAAAGCTTCATGACATTGGTCTTGGCAATGATTTCTTGGATATGACACCAAAAGCACAGGCAACAAAAGCAAAAATAAACAAATGGGACTAAATTAAACTAAAAAGCTTTTTCACAACAAAGGAAACAATTAACAGAGTAAAAAGGCAACCTATGGAATGGGAGAAAATATTTGCAAACCATATATCTGATAAGGGGTTAATATCCAAAATATATAAGGAACTCCTACAACTCAATAGCAAAAAAACAAAAAACCTAATTAAAAAAGGGCAAAGGACTTGAATAGACATTTCTCCAAAGAAGACATACAAATGGCCAACAGGTATATGAAAAGATCAACATCACTAATCATCAGGGAAATGCAAATCAAAACCACAATGAGATATCACCTCACACCTGTTAGGATGGCTATTATCAAAAAAAAAAAAAAAAATAAAATAACAAGTGTTGGTAAGGATGTGGAGCCCTTGTTTACTGTTGGTGGGAATGAAAAATGGTGCAGCCGCTATGGAAAACAATTTCGAGGTTTCCTCAAAAAATTAAAAATAGAACTACCATATGATCCAGCAATCCCACTTCTGGGTATTTATCCAAAAGAATTTAAAATCAGAATCTCAAAGAGAGATATTAGCACTCCTATGTTTATTGCAACACTATTCACAATAGCCAAGATGTGGAAACAACCTAAATGTCCATTAATAGATGAATGGATAAAAAAAATGTGGTATATACATACAATAGAATATTATTCAGCCTTAAAAAAGAAGGAAATTCTGTCATATGCTACAACATGGATGAACCTTGAGGACATTATGCTAAGTGAAATAAGCCAGTCACAAAAAGAAAAATACTTGCATGATTCCACTTATATATCTAAAATAGTCAAACTCATAGAAGCAGAGAGTAGAATGGTGGTTGCCAGGGGCTGGGGGGAGGGGGGAAATGGGGAGTTGCTGTTCAATGGGTATAGAGTTTCAGTTATGCAAGATGAATAAGTTCTAGAGATCTGCTGTACAACATTGTGCCTATAGTTAACAATACTGTATTGTACACTTAAAAATTTGTTAAGAGGGTAGATCTCATGTTAAGTGTTCTTACCACAATAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MB1.ORF1.hs3_orang.marg,L1MB1.ORF2.hs3_orang.pars,994,1995,2509,6321,6558,237
L1MB2,AGTAACCTCAGCAAGATGGTGAACTAAGAAGCTCCAGGCTCTCATTTTCTCACAGGGATACCAAGTTAACAAATAAATACAGAGAATAACAACTTTACAAAAACTCTAAAGAGACCAGTTAAGAAATTGTTAAACCCAGTTCAATATATAACCAAGAAGAGATTATAGTAAAAGAAGTAGGATAATGTGTAGATTTTCGTATAACCACCCCTTCCCTACCTCATGGCACACAAAAATATTGAGATACTACAGCAACCTTCCATTTTCTAGCAGGGGACAGGGAAGGGAAAAAAAATCTTGTTCCCCTAATTTCCCTTGTCAGGGGCTCCCCAAAGGACTGGTTTCTGTCTCGCCTGGCTCAGAGCACTGATGGGACTGTGGGTCATTTTGAAAATCGATAGCTCAGGGGCTTGTGGCGGCAGCAGATAGGCCATATAACTACACAGGCATATACAAGGAAAAAAGAGAGTTAAAAACTCTTGCCCATGAAAAGGCACAAAACCTATTTGATAGGAATATAAACCCAAAGCCCAGGCAGATCCTCTACCGATATAAGATACCTCCTGCATCTCCAGCTAGGCTGATTGATGAAAGTCTTCCCCTGTAAAAAGCCAGTCTTTAAAGACTGGGAGAGGTGGTTTTTTTTAACTGTCCAATTTTAACAAAAAGAATTACAACGAAAAAGAAAAAAAAGGAAGAAACAGACCATTAAAAAAGCAAAAAAAAAGCAACAGAAACTGACCCTAAAGAAAAGCAGATCTAAGACCTACTAGACAAAGACTTTAAAATAACTGTCTTAAAGATGCTCAATGAGCTAAAGGAAAACACAAACAATAAACAGAATCAGAAAAATGATGCATGAACAAAATGGGAATATCAATAAAGATATAAAAATAAAAAAAAAATAAAAAGAAATTTTGGAGCTGAAAAATACAATAACTAAAATGAAAAATTCACTAGAGGGATTCAATAGCAGACTTGATCAGGCAGAAGAAAAAACTTGAAGACAGTTCATTTAAAATAATATCAGGCCGGAGAAACAGAAAGAAAAAAAATGAAGAAAAGTGAAGAAAGCCTAAGGGACTTGTGGGACACCATCAAGCAGACCAATATATGCATTATGGGAGTTTCAGAAGGAAGAGAGAGAGAAGAGGGCAAAATAATAAAGCTTAAAAATACAGTAAGTAAAGTGAATAATTCACTAAAAATGTTCAATAGCAGACTAGATCAGGCAGAAGAAAAAAATGAACAGAACTTGAAGACAGATCATCAAGTCAGAGGAACAACAACAACAAAAAAGAATGAAAAAAGTGAAGACAGCCTAAGGGATTTGTAAGACAACATTAAAGTGATCAATATATGCATAATGGGAATTTCAGAAAAAGAAGTGAGAGAGAGCATAGCAGAAAGCATATTTGAAGAAATAATGGCCGAAAACTTCCCAAAATTGATGAAAGAAATGGATATACAAATCCAAGAAGCTCAACAAACTCCAACTATGATAAATTCAAAGACACCCACACGAAGATATATTATAATCAAACTTTCAAAACAAAAACCAAGAGAAAGCCTTGAAAGCAAAGCAAGACATACTAAACACAAAAAAAAAAATTTCATTAAGTTTACAAAGCAGATTTCTAGACAGAAACTTTGGAGGCCAGAAGGAAGTGGGATGATATTTAAAGAACTAGAAAAAAAAAAAAAACACCCAACCAATTATTGTATCTGGAAAAACTATACTTCACAAAATGAGGGAGAAATTAGGACTTTCCCAGATAAACAAAAGCTGAGGGAGTTCATTATCATTAGACCTGCCTTGCAAAGAAACACAAAAGGAAAATTAAACAATAAAAGAATGCTAGACAGTAACATGAAAGCATATGAAGATATAAATATCTCTGTTAAAGGTAAAATATAAACATTTACAAAAACTAGTATCTTTAATTTTGTAATGTTGGTGCATAAATCAATTTTAATTCTGGTATAGTATTTAAAAGAAAAACATATAAAAATAACTATAAATCTATATTAATGGATACACAATATAAAAAGATGTAATTTGTTACAATAATATAAAGTAGGGGGGGGGGGGATGTAAAGGAGTAGAGTTTTTGTATGCAATTGAAATTAAGTTGTTATCAGTTTAAAATAGATTGTTATAACTTTAAGATGTTTTATGTAATCCCCATGGTAACCACAGAGAAAATACCTATAGAAGATACACAAAAGAAAATGAGAAAGGAATCAAAGCATGTCACTACAAAAAAATCAATGAAAAACAAAGAAAGGAAAAAAGGAAGAAAAGAGGAAAAAAAAAGCCATAAGACATAAAAAACACAAATAACAATACACAAAATAAACAATCAACTAAAATGACAATATTATGTCATTCCCTATCAGTAATTACTTTAAATGTAAATGAATTAAACACTCCAAAAAGACATAGAATGGCTGAATGGTTAAAAAAAAGCGATTATACTATAAAGGACTTTAGATATAAAAATACACATAAGCTGAAAGTGAAAGGAAAAAAAAAGAAATTACATGCAAAAAGTAAAAAAAAGAAAGCAGGGTTTGCTATACTAATATCAAATAATATATATGCACCAAACATCAGAGCTATAAAGCAAACATTGACAGAATTGAAGGGAGAAATAGACAATACTACAATAATAGTAGGAGACTTCAATACCCCACTTTAAATATTGAATAGAACAACCAGACAGAAGATAAATAAGGAAAAAAAGGATTTGAACAACACTATAGACCAATTGGACCTAACAGACATATACAGAACACTCCACCCAACAACAGCAGAATACACATTCTTCTCAAGTGCACATGAAACATTCTCCAAGATAAAACAAATTTTAAGCCACAAAAAAAGTCTTAACAAATTTAAAAAAATTGAAATAATAAAAAGAATTTTTTCTTATAACAATGGAATAAAACTAGAAATCAATAGCAAAAGGAAAATTGGAAAATATAAAAATTAAAAAAAATAATATACAAAAAAACCTAAATATAAAAAAGAAATCACAAGGGAAATTAGAAAATATCTTGAGACAAATGAAAATGAAAACACAACATACCAAAAAATATGATAATGAAATAAAAGAAGTACTAAGAGGAAAGTTTATAAATATAAATGTTTATATTAAAAAAAGATCTCAAATCAATAACCTAACTTTACACCTCAAGGAACTAAAAAAAGAAGAACAAACTAAACCCAAAGTTAGCAGAAGGAAGGAAATAATAAAGATTAGAGCAGAAATAAATAAAATAGAAACTATAAAAAAAATTAAAAAAAAAAAAAATTGGTTTTTTGAAAAGATAAACAAAATTGACAAACCCTTAGCTAGATTAACAAAGAAAAAAAAGACTCAAATAACTAAAATCAGAAATGAAAGAGGAGACATTACAACTGATGCCACAGAAATAAAAAGGATTATAAGAGAATACTATAAACAATTGTATGCCAACAAATTGGATAACCTAGAAGAAATGGATAAATTCCTAGAAACATACAACCTACCAAGACTGAATCATGAAGAAATAAAAAATCTGAACAGACCTATAACTAGTAAGGAGATTGAATCAATAATCAAAAATCTCCCAAAAAAGAAAAGCCCAGGACCAGATGGCTTCACTGGAGAATTCTACCAAACATTTAAAGAAGAATTAACACCAATCCTTCTCAAACTCTTCCAAAAAATTAAAGAAAAGGAAACACTTCCAAACTCATTCTATGAGGCCAGTATTACCCTGATACCAAAGCCAGACAAAGACACTACAAAAAAAGAAAACTACAGACCAATATCCCTGATGAATATTGATGCAAAAATCCTCAACAAAATACTAGCAAACTCAAACAGCACATTAAAAGGATTATACACCATGACCAAGTGGGATTTATTCCTGGAATGCAAGGATGGTTCAACATATAAAAATCAATCAATGTAATACACCACATTAACAGAATGAAGGACAAAAACCACATGATCATCTCAATTGATGCAGAAAAAGCATTTGACAAAATTCAACAACCTTTTCTTGATAAAAACACTCAACAAACTAGAAATAGAAGAAAACTACTTAACAAAATAAAAGCCATATATGAAAAGCCCACAGCTAACATCATACTCAATGGTGAAAAACTGAAAGCTTTTTCTTTAAGATCAGGAACAAGGCAAGGATGCCCACTTTCACCACTTCTATTCAACATAGTATTGGAAGTTCTAGCCAGAGCAATTAGAAAAGAAAAAAAAATAAAAGACATCCAAATTGGAAAGGAAGAAGTAAAATTATCTCTGTTCACAGATGACATGATCTTATATGTAGAAAACCCTAAAGATTCCACAAAAAAACTGTTAGAACTAATAAATAGTAAAAAGGTACAAAATAAAAACTCAAAAAAAAAATTGGTTGTTTTTCTATTAACTATGAACAATTCGAAAAAGAAATTAAAAAAAAAAATTCCAATTTCAATAAGCACAAAAAAAAAAAAATACTTAGGAATAAATTTAACCAAAAAGGTGAAAGACTTGTACACTGAAAACTACAAAACATTGCTGAAAAAAATAAAAGAAGACACACAAATAAATGGAAAGATATCCCGTGTTTATGGATTGAAAGACTTAATTTTTTTTAAATTTCCAATACTACCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAAATCCCAATGAGTTTTTTTGGAAGAAATGGAAAAATTAATCCTAAAATTCATATGAAATCTCAAGGGACCCTGAATAGCAAAAAAAATATTAAAAAAAAAAAAAAAAAATGTGGAGGACTCACACTTCCTGATTTCAAAACATATTACAAAGCTACAGTAATCAAAAAAGTGTGGTACTGGCATAAAGACAGACATATAGACCAATGGAATAGAATAGAGAGCCCAGAAATAAACCCTCACATATATGGTCAAATGATTTTTAACAAGGGTGCCAAGACCACACAAATTGGGAAAAAAAAAACTCTTTAAAAAAAAGGGTTGGGAAAAACCTGGATATCCATATGCAAAAGAATGAAGTTGGACCCTTACTTTACACCATATACAAAAATTAACTCAAAATGGATTAAAGACCTAAACATAAGACCTAAAACTATAAAACTCCTAGAAGAAAACATAGAGGAAAACCTTCATGACATTGGATTTGGCAATGATTTCTTGGATATGACAACAAAAGCACAGGCAACAAAAACAAAAATAGACAAATGGGACTACATCAAACTTAAAAACTTCTGTGCATCAAAGGAAACAATCAACAGAGTGAAAAGGCAACCTACAGAATGGGAGAAAATATTTGCAAATCATATATCTGATAAGGGGTTAATATCCAGAATATATAAAGAACTCCTACAACTCAACAACAAAAAAACAAACCCAACATTAAAAAAATGGGCAAAGGACTTGAATAGACATTTCTCCAAAGAAGATATACAAATGGCCAACAAGCATATGAAAAGATGTTCAACATCACTAATCATTAGAGAAATGCAAATCAAAACCACAATGAGATATCACCTCACATCCATTAGGATGTCTACTATAAAAAAAAAAAACAAAATAACAAGTGTTGGTGAGAATGTGGAGAAATTGGAACCCTTGTGCACTGTTGGTGGGAATGGAAAATGGTGCAACCGCTATGAAAAACATTATGAGGGTTCTCTCAAAAAATTAAAAATAGAATTACCATATGATCCAGCAATCCCACTTCTGGGTATATATCCAAAAGAAATTGAAAGCAGGATTTTGAAGAGATATTTGCACACCCATGTTCATTGCAGCAATATCCAAAAGATGGAAGCAACACACAAATGTCCATTGACAGATGAATGGATAAACAAAATGTGGTATATACATACAATAGAATATTATTCAGCCTTAAAAAAAAAGGAAATTTTGTCACATGCTACAACATGGATGAACCTTGAGGACATTATGCTAAGTGAAATAAGCCAGTCACAAAAAGACAAATACTACTATCTAAAGTAGTCAAATTCATAGAAACAGAAAGTAGAATGGTGGTTGCCAGGGGCTGGGGGGAGGGGGAAAAGGGGAGTTGTTTGTTTAATGGGTATAGATTTTCAGTTTTGCAAGATGAAAAAGTTCTGGAGATCTGTTGCACAACAATGTGAATATATTTAACACTACTGAACTGTACACTTAAAAATGGTTAAGATGGTAAATTTTATTTTATGTGTTTTTTACCATAATAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MB2.ORF1.hs4_gibbon.marg,L1MB2.ORF2.hs4_gibbon.pars,1157,1846,2356,6014,6253,239
L1MC1,TTTAGTTCCAGTTTTCTGGCTTTCAGGTAAGGAGCTTCGAAGTTACCACTCCATCTTAACAACAAGTAAAAAGCTGAACAAACTGGAAAATCAACAACTCTTCTTAGATCCGTAAGAGAAGTGAGGTCACAGGGCAAACCGCTGCCCCCAAAATTGGAGAGACAGACAGGCAAATACAGGAAATCCCAGTTTCCGGAACAAGAACTCAGGAGCCAGAACCTCCTCAGGAATCAGTGCCGGGGTAGGAAAACCTGAACTGTAATTGACAAATTGTTGGAGGCTCAGTGTGGAGAGGTCTGAGAGTTAAAAACTCGAGGAGGGGGGCCCAGTCATGGGGGGGCCCCCACAATTTTGTGAGTTTTTCCTCCAGGAGCTTGACCAGGTTCTCACAGTGAATATCGGAGAAAAATCCCCTCATGCTTCCGGCAGGGAGAGGGGAAAAGGAACCATTTTGAAATACACCAGAGCATTCTGTTCTTCTTAACAAGGCCTGCCCTCAGGAGAAACTATTTTACCAGAGCCTAACCTGCTGGGGTTTTATCAGAGCTTAACCTACCTGGGGGAAGGGAAATACCCAACTCCAGCCCCCTCTAGCCATCCTGTCCCACCTAAGGGGGGGGGGGGGAGAAAGAGGAAGGCTGAGAAGCACTTGTGAAGTTCACAGTCCAGGGGCACAGGCTCACTAAAAGACTGAGACCTAATCATAGGACTATAGAACACTTCCCCCCCCCCCACACCTTACCACCACATTACTAAAGGCCTATTTACCGCAGTTCCTTTTACCCAGTACATCATGTCCACCTTTCAAAAAAATTTCAAGACATACTACAAAAAGGAAAAAAACACAGGTTGAAGAGACAGAGCAAGCATCAGAACCAGAGTCAGATATGGCAGGGATGTTGGAATTATCAGACCAGGAATTTAAAACAACTATGATTAATATGCTAAGGGCTTTAATGGAAAAAGTAGACAGCATGCAAGAACAGATGGGTAAAAAAAATGCTAGAGATCAAAAACACTGTAACAGAAATGAAGAATGCCTTTGATGGGCTCATTAGTAGACTGGACATAGCTGAGAAAAGAATCTCTGAACTTGAGGATATCTCAATAGAAACCTCCAAAACTGAAAAGAAAAGAATGAAAAGCAAAGAGAAAAAAAACTGGTCAAAAATAAAAAACAGAATATCTAAGAAATGTGCGACAACTGCAGAAGACGTACAAAAAACATGTAACATATGTATAATGGGAATACCAGAAAGAAAAGAAAGAGAGAAAGGAACAGAAGAAATATTTGAAACAATAATGACTTATAAATTTCCCAAATTAAAGTCAAAACACAAACCAAAGAAAATCCAAGAAACTCAAAAAACACCAAGCAAAATAAATGAAAATACACATAGACATATAATATTCAAATTACAAAAAATAAAAAATAAAAAAAAAATTTTGAAAGAAGCCAGAGAAAGAAAAAAACACCTTACCTATAGAGGAGCAAAGATAAGAATTACATCTGACTTCTCCTCAGAAACCATGCAAGCAAGAAGAGAGTGGAGTGAAATATTTAAAGTGTTGAGAGAAAAAAAACACCAACCTAGAATTCTGTACCCTGAAAAATTATCCTTCAAAAGTGAAGGAGAAATAAAGACTTTCTCAGACAAACAAAAATTGAGAGAATTTGTTGCCAGTAGACCTGCCTTGCAAGAAATGTTAAAAGAAATTTTTTTAGAAGAAAAAAAAAGGAAAATGATATAGGTCAGAAACTCAGATCTACATAAAGAAAGGAAGAGCATCAGAGAAGGAATAAGTGAAGGTAAAATAAAAACTTTTTTTTTTCTTTTTTTTAATTGATTAACAGATAACAGTTTGTTCAAAATAATAATAGCAACAATGTATTTGATTATGTATGCTTATGTATATATGTATATATATATATATACATATGTATGTTTATGTATAAGTGAAATGAATGACAGCAATGATACAAGGGACAGGAGGAAGGAATTAGATTATTTTGTTATTATAAGGTACTCGCACTACCCGTGAAGTGGTATAGTGTTATTTGAAAGTGGACTTGGATTAGTTGTAAATGTATATTGCAAACTCTAGGGCAACCACTAAAAAAAGTTAAAAAAAAGAAGTATAACTGATATGCTAAGAAAGGAGAGAAAATGGAATCATATAAAATGCTCAATTAAAACCACAAAAGGCAGAAAAAGAGTGGAAGACAAAAATAGGAACAAAGAACAAGGGCAACAAATAGAAAACAGTAACAAATTGGTAGATATTAATCCAACTATATCAATAATCACTTTGAATGTCAATGGTCTAAATACACCAATTAAAAGACACAGATTGTGTCAGAGTGTATAAAAAAAAAAAAAACAAATAAATGTATTTTATATAAAAAAAACACACTTTAAATATAAAGACACATATAAATTAAAAGTAAAAGGAATGAAAAAAATATACCATGCTAACACAAATCAAAAGAAAGCAGAAGTAGCTATATTAATTTCAGACAGAGCAGACTTCAGAGCAAGGAAAGTTATCAGGGATAAAGAGGGGCATTACATAATGATAAAGGGGTCAATTCTACAAGAAGACATAACAATCTTTAATGTGTATGTACCTAACAACAGAGCATCAAAATATATGAGGCAAAAACTGATAGAACTACAAGGAGAAATAGATGAATCCACTATTATAGTTGGAGACTTCAACACCCCTCTATCAGAAATGGACAGATCCAGCAGGCAGAAAATCAGTAAGGACATAGTTGAACTCAACAACACCATCAATCAACTGGATATAATTGACATCTATAGACTACTTCATCCAACAACAGCAGAATACACATTCTTCTCAAGCTCACATGGAACATTCACCAAGATAGACCACATTCTGGGCCATAAAACACACCTTAACAAATTTAAAAAAATAGAAATCATACAATGTCTGCTCTCAGACCACAATGGAATTAAACTAGAAATCAATAACAGAAAGATAGCTGGAAAATCCCAAAATACTTGGAGATTAAAAAACACACTTCTAAATAACATATGGGTCAAAAAAAAAATCTCAAGAGAAATTAAAAAATATTTTGAACTAAATGAAAATGAAAACACAACTTATCAAAATTTGTGGGATGCAGTAAAAGCAGTGCTTAGAGGGAAATTTATAGCATTGAATGCATATATTAGAAAAGAAGAAAGATCTAAAATCAATAATCTAAGCTTCCACCTTAGGAAACTAGAAAAAGAAGAGCAAATTAAATCCAAAGTAAGCAGAAGAAAAGAAAAAATAAAAATTAGAGCAGAAATCAATGAAATTGAAAACAGAAAATCAATAGAGAAAATCAATAAAACCAAAAGCTGGTTTTTTGAAAAGATCAATAAAATTGATAAGCCTCTAGCCAGGCTAAGAAAGAAAAAAAGAGAGAAGACACAAATTACTAATATCAGAAATGAAAGAGGGGACATCACTACAGATCCCATGGACATTAAAAGGATAATAAAGGAATACTATGAACAACTCTATGCCCACAAATTTGATAACCTAGATGAAATGGACCAATTCCTTGAAAGACACAATCTGCCAAAACTCACACAAGAAGAAATAGACAATCTGAATAGGCCTATATCTATTAAAGAAATTGAATCAATAATTAATAACCTTCCAAAACAGAAAGCACCAGGCCCAGATGGGTTCACTGGTGAATTCTACCAAACATTTAAGGAAGAAATTATACCAATTCTCTACAATCTCTTTCAGAAGATAGAAGCAGAGGGAATACTTCCTAACTCATTCTATGAGGCCAGCATTACCCTAATACCAAAACCAGACAAAGACATTACAAGAAAAGAAAACTACAAAATATCTCTCATTAACATAGATTCAAAAATTCTTCAACAAAATATTAGCAAATTAAATCCAACAATGTATATAAAAAAAATTATACACCACGACCAAGTGGGATTTATTCCAGGTATGCAAGGCTGGTTCAACATTTAAAAATCAATTAATGTAATCCATCACATCAACAGGCTAAAGAAGAAAAATCACATGATCATATCAATAGATGCAGAAAAAGCATTTGACAAAATCCAACACCCATTCATGATAAAAACTCTCAGTAAACTAGGAATAGAGGGGAACTTCCTCAACTTGATAAAGAATATCTACAAAAAACCTACAGCTAACATCATACTTAATGGTGAGAAACTAGAAGCTTTCCCACTAAGATCAGGAACAAGGCAAGGATGTCCCCTCTCACCACTCCTTTTCAACATCATACTGGAAGTCCTAGCTAATGCAATAAGACAAGAAAAGGAAATAAAAGGTATACAGATTGGGAAGGAAGAAATAAAACTGTCTTTGTTTACAGATGACATGATTATCTATGTAGAAAATCTAAAAGAATCAACAAAAAAACTCCTGGAACTAATAAGCAATTATAGCAAGGTTGCAGGATACAAGGTTAATATACAAAAGTCAATCACTTTCCTATATACCAGCAATGAACAAGTGGAATTTGAAATTAAAAACACAATACCATTTACATTAGCACCCCCAAAAATGAAATACTTAGGTATAAATCTAACAAAATATGTACAAGATCTATATGAGGAAAACTACAAAACTCTGATGAAAGAAATCAAAGAAGAACTAAATAAATGGAGAGATATTCCATGTTCATGGATAGGAAGACTCAATATTGTCAAGATGTCAGTTCTTCCCAACTTGATCTATAGATTCAATGCAATCCCAATCAAAATCCCAGCAAGTTATTTTGTGGATATTAACAAACTGATTCTAAAGTTTATATGGAGAGGCAAAAGACCCAGAATAGCCAACACAATATTGAAGGAGAAGAACAAAGTTGGAGGACTGACACTACCTGACTTCAAGACTTACTATAAAGCTACAGTAATCAAGACAGTGTGGTATTGGCAAAAAAATAGACAAATAGATCAATGGAACAGAATAGAGAGCCCAGAAATAGACCCACATAAATATAGTCAACTGATCTTTGACAAAGGAGCAAAGGCAATACAATGGAGAAAAGATAGTCTTTTTAATAAATGGAGAACAAATAAAGATATACACACAAAAAAAAAAATGAATCTAGACACAGACCTTACACCCTTCACAAAAATTAACTCAAAATGGATCATAGACCTAAATGTAAAATGCAAAACTATAAAACTCCTAGAAGATAACATAGGAGAAAATCTAGATGACCTTGGGTTTGGCAATGACTTTTTAGATACAACACCAAAGGCACAATCCATGAAAGAAAGAATTGATAAGCTGGACTTCATTAAAATTAAAAATTTCTGCTCTGCAAAAGACAATGTCAAGAGAATGAAAAGACAAACCCCAAAATGGGAGAAAATATTTGCAAAAGACATATCTGATAAAGGACTGTTATCCAAAATATACAAAGAACTCTTAAAACTCAACAATAAGAAAACAAACAACCTAATTAAAAAATGGGCCAAAGACCTTAACAGACACCTCACCAAAGAAGATATACAGATGGCAAATAAGCATATGAAAAGATGCTCCACATCATATGTCATCAGGGAAATGCAAATTAAAACAACAATGAGATACCACTACACACCTATTAGAATGGCCAAAATCCAGAACACTGACAACACCAAATGCTGTGGTGAGGATGTGGACAAAAAGAACTTTCAATCATTGCTGGTTGGAATGCAAAATGGTACAGCCACTTTGGAAGACAGTTTGGCAGTTTCTTACAAAACTAAACATACTCTTATCATATATGATCCAGCAATCATGCTCCTTGGTATTTACCCAAATGAATTGAAAATTTATGTCCACACAAAAACCTGCACATAGATGTTTATAGCAGCTTTATTCATAATTGCCAAAACTTGGAAGCAACCAAGATGTCCTTCAGTAGGTGAATGGATAAATAAACTGTGGTACATCCAGACAATGGAATATTATTCAGCGCTAAAAAGAAATGAGCTATCAAGCCATGAAAAGACATGGAGGAAACTTAAATGCATATTACTAAGTGAAAGAAGCCAATCTGAAAAGGCTACATACTGTATGATTCCAACTATAATGACATTCTGGAAAAGGCAAAACTATGGAGACAGTAAAAAGATCAGTGGTTGCCGGGGGTTGGGGGGGAGGGAGGGATGAATAGGCAGAGCACAGAGGATTTTAGGGCAGTGAAACTACTCTGTATGATACTATAATGGTGGATACATGTCATTATACATTTGTCCAAACCCATAGAATGTACAACACCAAGAGTGAACCCTAATGTAAACTATGGCTTTGGGTGATAATGATGTGTCAATGTAGGTTCATCAATTGTACAAATGTACCACTCTGGTGGGGGATGTTGATAGTGGGGGAGGCTGTGCATGTGTGGGGGCAGGGGGTATATGGGAAATCTCTGTACCTTCCGCTCAATTTTGCTGTGAACCAAAACTGCTCTAAAAAAAAAAGTTTTTT,ORF1 and ORF2 replaced with MACSE reconstructions,L1MC1.ORF1.hs0_human.marg,L1MC1.ORF2.hs6_sqmonkey.marg,994,1737,2275,6099,6498,399
L1MB3,AGAGAAATTCTGAAGCTTAAAGGTATAATAACTAAAATGAAAAATCTACTAGAGAGATTCAAAGGCAGATTTGAGCAGGTAGAAGAAAGAATCAGAGTACTTGAAGATAGGACAATGAAAATTATTAAGCCTGAGAAACAGAAAGAAAAAAGATTAAAGAAAAGTGAACAGAGCCTAAGGAACATGTGGGACACCATCAAGTAGACCAACATACATATTGTTGGAGTCCCAGAAAGGGAAAAAAAAAAAAAAGGGACAAAGAGAATATTTGAAAAAATAATGGCTGAAAACTTCCCAAATTTGATGAAAGACATGAATATAAACATCCAAGAAGCTCAACAAACTCCAAGTAAGATGAACTCAAAGAGACCCACACCGAGACACATTATAATCAAACTGTCAAAAGACAAAGAGAGAATTTTGAAAGCAACGAGAGAAGTGACTTATCATATACAAGGGATCCTCAATAAGATTATCAGCAGATTTCTCATCAGAAACTTTGGAGGCCAGAAGGCAGTGGACAGAAGGCAGTGGGCTAATATATTCAAAGTGATAAAAAAAAAACGAACAAAAAAAAAAAACTGTCAACCAAGAATTCTATATCTGGCAAAACTGTCCTTCAAAAGTGAGGGAGAAATTAAGACATTCCCAGATAAACAAAAGCTGAGGGAGTTTATTACCACTAGACCTGCCCTACAAGAAATGCTAAAGGGAGTCCTGCATATTAAGAATCTGAAGAAATATCAGCGATTACTTTAAATTAATTACTTTAAATCGACTAAACCTACCACAATCAAAAGGCATAGATTGGCAGAATGGATTTTTATAAAAAAATAGCATCCAACTATATGCTGTCTACAAGAGACTCAGTTTTAGATCTAAAGACACAAATAGTTTGAAAGTGAAAGGATGAAAAAAGATATGCCATGAAAATAGTATTATTAACCAAAAGAGAGCAGGGGTGGCTATACGGATATCACACAAAACAGACTTTAAGTCAAAAAAGCTTACAAGAGACAAAAAAGGACATTTTATATTATTAAAAGATACAGTACAGCAAGAAGTACCAACAAGAATAACAATAATAAACATATATACACCAAATATCAGAGCATCAAAATATACGAAGCAAACATTGACAGAATTGAATGGAGAAACAGATAGCTCTACAAGAACAGTAGGAGACATTAGCACTCCGCTTTCAATAATGGATAGAACAAGGAGACATAAGATCCCCACATCCAGACAAAGAATCAATAAGGAAATAAAGAACTTGAACAACACTATAAACCAATTAGACCTAACAGACATATACAGAATACTCCACCCAACAACAGCAGAACACACATTTTTCTCAAGTGCACATAAAACATTCTCTAGGATAGACCATATGTTAGGCCACAAAACAAGTCTTAATAGATTTTTAAAAACAGAGAAATGTATATATTTAGAAAACATAAAAAGTATCCTTTTTAACAAAGAATGGATAAAACTAGAAATCAGTAACAAAAGGATAACTGGAAAATTCGAAAATTATGAAAAATGTAAACAATACACTCCTAACCAACCAATGATGGGTAAAAGAAAAATCACAAAGGAAATTAGAAAATATTTTGACATATGTAAATATATATCTTGTGACAAAAATAAAAATAAAAACACAACTTACCAAAACTTACGGGACGGAGTGAAAGCAGTGCTAAGAGAAAAATTTATAGCTATAAACACATACATAAAAAAAGAAGAAAGATCTCAAATCAACAACCTAATTTTACACCTTAAGGAACTAAAAAAAGAAGAACAAACTAAACTCAAAGCTAGCAGAAGAAAGGAAATAATAAATATTAGAACAGAAATAAGTGAAATAGAAAATAGAAAAACAATAGAAAAAATAAACGAAACCAAAAGTTTGTTTTTTGAAAAGATCAACAAAATTGACAAACCTTTAGCTAGATTGACTAAGAAAAAAGAAAAGACAAAAATTACAAAAATCAGAAATGAAAGAGAGGGGATCATAGTAACTAATTTTATAGAAATAAAAAGGATAATAAAAGAGTACTATGAACGATTATGTGCCAACAAATTGGATAATCTAGATGAAATGGACAAATTTCTAGAAACACAAAACCTACCAAGACTGAATCATAAAGAAATAGAAAATCTGAATAGACCTATAATTTTAACTAGTAAGGAGATTGAATCAGTAATCAAAATACTCTCAAAAAAGAAAGGCCACGGGCTGGAGTCTTTCATTAGTGAAATCTACCGAAAAAAGAACAGAAATCCAATCTTCCCAAATCTTTTCAAAAAAATAGAAGAGGATAGAACACTTCCTACTCAATTCATTGAGGCCCACTTTTTCCTTATACCAAAACCAGACAAAGACACTACAAGAAAAAAAAATAATAGACCAACATCTCTTATGAACATTGATGTAAAAATCCTCAACAAAATACTAGCAAAGTGAATTCTAAAGCATATTAAAAGAATTATACACCATGACCAAGTGAGATTTATTCCTGGAATGCAAGGATGGTTCAACATACAAAAATCAATCAATGTAATAGTCCACATTAACAGAATGAAGGAGAAAAACCCACATATGATCATCTCAATTGATGCAGAAAAAGCATTTGACAAAATTTAAACACCTTTTAAGATTAAAAAAGCAAAAAAACTCAACAAACTAGGAATAGAAGGAAACTACCTCAACTTAATAAAGGCCATGTATAAAAAACCCACAGCAAACATCATACTCAAAGATGAAAAAACTAAAAGTTTTTCTCCAAAATTAAAAACAAGACAAAGATGCCCACTTTTACCACTTCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAATAAAAGAAAATAAAGAAATTAAAAGCATCAAAAAAGGAAAGGAAGAAGTAAAATTATCTCTGTTCACAGATGATATAATCTTATATGTAGAAAACCCTAAAGATTTTTCCATAAAAATCCACAAAAAAATAAACAATTATAATAAAGTTAAAAAAAAAAAAACCCTGAAAATTGTTAGAATTGATAAATATATTCAGCAAATCAACACAAAAAAATTAATTGCATTTCTATACACTAAAAATGAACAATTTAAAAATGAAATTAAGAAAACAATTCCATTTACAATAGCAACAAAAAGAATAAAATACTTAGGAATAAACTTAACCAAGGAGGTGAAAGACATGTACAATGAAAACTACAAAACATTGCTGAAAGAAATAAAAGAAGACGGAAACACACACACACACACAAAAATAAACAGAAAGCAAATTCATGTAAATAAATGGGAAGACATATTAATATTAACGTGTCCATATGTCACCAAAATGATCTATAGATTCAATGCAATCCCTATCAAAATCCCAATGCCAATGTTTTTTGTAGAAATAAAAAAACCCATCCTAAAATTCATATGGAATCTCAAGGGACCCCAAATAGCCAAAACAATCTTGAAAAAGAAGAACAAAGCTGGAGGACTCACACTTCCTGATTTCAAAACTTACTACAAAGCTACAGTAATCAAAATAGTGTGGTACAGGCATAAAGACAGACATACAGACCAATGGAATAGAATAGAGAGTCCAGAAATAAACCCTCGCATATATGGTCAAATGATTTTTGACAAGGGTGCCAAGACCATTCAATGGGGAAAGGACAGTCTTTTCAACAAATGGTGCTGGGAAAAACTGGACATATCCACGTGCAAAAGAATGAAGATGGACTCATACCTCATAACATACACAAAAATAAACTCAAAATGGATCAAAGACCTAAATGTAAGAGCTAAAACTATAAAACTCTTAGAAGAAAACATAGGGCAAAAGCTTCATGACATTGGATTTGACAATGATTTCTTGGATATGACACCAAAGGCACAGGAAACAAAAGAAAAAATAGAAAAATTGGACTTCATTAAAAATTTAAAATTTCTGTGCATCAAAAAAACAATAAAAAGAGTTAAAAGGCAACCCACAGAATGGGAGAAAATATTTGCAAATCATATATCTGATAAGGGATTAATATCCAGAATATATAGAGAACTCCTAAAACTCAACAACAGACAATCAAAAACAAACAACCCAATTCAAAAATGGGCAAAGGACTTGAATAGACATTTCTCCAAAGAAGATATACAAATGGCCAATAAGCACATGAAAAGATGCTCAACATCACTAATCATTAGGGAAATGCAAATCAAAACTACAATGAGATACCACCTCACACCCATTAGGATGGCTACTATTAAAAAAAAAATAGAAACAGAAAATAACAAGTGTTGGCGAGGATGTGGAGAAATTGGAACCCTTGTGCACTGTTGGTGGGAATGTAAAATGGTACAGCCGCTATGGAAAACAGTACGGCGATTCCCCAAAAAATTAAAAATAGAATTACCATATGATCCAGCAATTCCACTTCTGGGTATATACCCAAAAGAATTGAAAGCAGGGTCTCAAAGAGATATTTGTACACCCATGTTCATAGCAGCATTATTCACAATAGCTAAAACGTGGAAGCAACCCAAGTGTCCATCAACAGATGAATGGATAAGCAAAATGTGGTATATACATACAATGGAATATTATTCAGCCTTAAAAAGGAAGGAAATTCTGACACATGCTACAACATGGATGAACCTTGAGGACATTATGCTAAGTGAAATAAGCCAGTCACAAAAGGACAAATACTGTATGATTCCACTTATACTGAGGTCAAATAAAGGTACTAGAACTACATATATTAACATTGATGAATCACAAAACCTAACGTTGAATGAAAACAGAAAGTCACAGGAAAAAAAATGAATCCATTTTTATGTAGGGTAAAACTGGGCAAATAATAAACAATACATTGTTTAGAGATACATTCGTAAATGATAAACTTTAAGGAAAAACAAAGGAGTGATTAACACCGAATTCTGGAGAGCGGTAACTTTTGATAGGTAGGGAGGGGGAAGTGATTGGGGTGGGGGCGCACAGAGGACTTCTCTCTTTTAAGCTATGAGGTAGGTCTTGAGTTTTCATCTTATGATTATTTTTAAAACTCTGTGTGTGTGTTTGTGTGTGCGTGTGTTACGAATAATACATTCCCCAATAAAAAGAAT,ORF1 MACSE reconst added to beginning,L1MB3.ORF1.hs4_gibbon.marg,L1MB3.ORF2.hs7_bushaby.marg,0,729,739,4744,5133,389
L1MB4,TAGTGACATCAGCAAAATGGCAGACTAGGAAGCTGCAATTTCTCAAGACTTGGGAGCACTAAATTTCCCATAGTTCCCCTAAGAAACCATCAGAAACTACCAGAACCAACTTTGTAAGAACTCTGGGAAACAATCAACGGATTACACAATTCAGGAAAAGCTGTAATCAAAATTGGGGGGGATTCCATAGCATTTTTGGTCGTTGTGGCGTTGCTGCCTGCTCTTTTAGTATATGATGCTCAGTGTGGCAATAATTTTAGTCATGAGCAGCACAACACAATCTTGATTTCTCTAATTGATAAGGGAGTGCAGAATAGTCTCTATTAGCGAATAATTGTGTAGGTATGTTCTAACCTGTCTGGGGGCTACCTGAAGGACTGATGTAAAGTGAGCATCTCTTTTTGCCTAACTCAATGAGGAAAAGCAGCAGGCATTGCTCTCAAAAGCTACAAGATAACATAAGAACTGTAGGTGGGTGGGGCCAGAAGATAAAAGTGGAGACATACAATAGGCCATCTAATGCCCAAAGGAGAAACTGGAATGAAACTCTTTTGGAAATTAAGACATTCAAAAGTAGTCAATTAAAATAGGAAATTAAAAAAGCAACAACAGAGCCAAAACAAAACATATACACAAAAAAGACCTAAGAAGACCTTAAACTTTCACCTTGGGCTGATCCCTAGACTCAGTGCAAGCCTGGCTAACTGTTTAAGGAGGGGCATACATGCAGACCTACAGAGCCAGTCCGTAAAGAGAGAGAGAGGTGGTTTTTATTTTCCATGCTTTATTATTGGTTTTGTTTTAAGTCCTGGGATTCCCGGAAATCTCTGTCAGAACATTAGCTGAATATAAGCTATAAAAAAAAGAATTTCATGTCCCAACATGAGCAAAAAATAGGTTTTTTAAAAAATAGTTTGGAAAAGTCACTAAACAAACAGACTACTACAGCCTTCAATAATAAAAAATAAACATACAGACATGCATGCATGCATACATACATAAAAACTTTGAAAAAGAGGAAAATATGATTTCCAGAATTACAATATAATAATACTTAAATGATTAAGTTCAAAAAAAAATCACAAGGCATACAAAGAACAGGAAAGTATGGCTCATTCAAAGGAACAAAATAAATTAACAGAAACCATTCCTGAGGAAGCCCAGATATTGGAATTACTAGACAAAGACTTTAAATCAACTGTCTTAAATATGCTTAAAGAGTTAAAGGAAAACACGGACAAAGAACTAAAGAAAATCAGAAAAATAATATATGAACAAAATGAGAATATCAAGGAATAAGAGAAATTTGTAAAAGGAACCAAACAAACAGATTTGAGCAGGCAGAAAAAATGATTAGCAAATTTGAAGACAAGGCAATTAAAATTATCAAAATAATAGGGATACAAAGAAAGAAAAATGAACAGTGCCTAAGGAAGATTTGTAAGACAACATTAAATACTGATCAATATATGCATAATGGGAATTTCAGAAAAAGAAGTGAGAGAGAGCATGGCAGAAAGAATATTTGCAGAAATAGTGGCCAAAAGCTTCCCAAGTTGGATGAAAGACATGAATCTACAAATCCAAGAAGCACAACAAACTACAAGTATGTTAATCTCAAAGACACCAACAGGGAGAAAAATTATAATCAACTGTCAAAAGCAAAAACCAAGACAAAGAGCCTTGAAAGCAGCGAGAGAAGAGAGACTAGTCACATAAAAAAAATTCTCAATAAGATTACCAGCCAATTTCTCATCAGAAATATTGTGAGTCCAGAAGTCAGTGGCATAGCATATTTTAAAGAGCTGAAAGAAAGAAAAAACAGTCAACCAAGAATTCTATATCTGGCAAAACTACCCTTCAAAAATGAGGTAGAAATTAAGACATTTCCAGATAAACAAAAGCCAAGGGAGTTCATTACCACTAGACCTGCCTTGCAAGAAATGATAAAGAATGAAAGAACACTAGACAGTAACTTGAAGCCATATGAAGAAATAAAGATCTCTGGTAAAGGTAACTACATAGGCAAATATAAAAGCTAGTATTATTGTACTTTTGGTTTGTAACTCCACTTTTATTTTCTTTCTATATTATTTAAAAGATAAATGAATAAAACTATAATTATAAATCTATGTTATTGGGCACACAATGTATAAAGATGTAATTTGTGACAATAATAAAAACAACATAAGGGGAGGGACGGAGATATATAGGAGCAGAGTTTTTGTATGCTATTGAAGTTAAGTTGGTATTATTTAAAACTAGGTTGTTATAAGTTTAAGATGTTAATTGTAATCCCCATGGTAACCACTAAAAAATCTGTAAAATATATATAAAAGGAAATAAAAAGGGAATCAAAATGTTTCACTAAAAAAAATCAACTAAACACAAAAGAAGGCAGTAATGGAAGAAATGAGGGACAAAAAAGCTATAAGACATACAGAAAACAAATAGCTAAAAGTCATTCCCTACCAGTAATTACTTTAAATGTAAATGGATTAAACTCCAAATCAAAAGAAATAGATTGGCAGAAAGGATTTTTAAAAAACAGGATACAACTATACGCTGTCTACAAGAGACTCACTTTAGATCTAAAGACACAAATAGGTTGAAAGTGAAAGGACGGAAAAAGATATTCAATGCAAATAGTAACCAAAAGAGAGATGGAGTGGCTATACTAATATCAGACAAAATAGATTTTAGTTAAAAAACTATTATAAAAGACAAAGGACATTACAGATTGATAAAAGGGTCAATTCACCAAGAAGATAAGAACAATTATAAATATATACACGCACCAAACATCAAAGCTCCAAAATATATGAAGCAAACACTGACAGAATTGAATGAAGAAAGAGACAGTTCTACAATAACAGATGGAGACTTCAACACTCCACTTTCAATAATGGATAGAACAGCCAGACAGCTAAAGAAGAGCAATAAGGAAACAAAGGACTTGAACAACACTATAAACCAACTAGAACTAACAGACATATATAGAACACTCCACCCAACAACAGAATACACATTTTTCTTAAGTACATATGGAACATTCTCCAGGACAGACCATATGTTAGGCCACAAAACAAGTCTCAATACATTTAAAAAACTGAAATCATACAAACTTTCTTTTATCTTCTCCAATCACAATGGAATAAAACTAGAAATCAATAACAGAAGGAAAACTGGAAAATTCACAAATATGTGGAAATTAAACAAAACACTCTTAAACAACCATTGGGTCAAAGAAGAAATCACAAGGGAAATTAGAAAATACTTTAAGGAAACAAATGAAAACGAAAACAAAAAGTACCAAAACTTATGGGATGCAGAAAAAGCAGTGCTAAGAGGGAAATTTATAGCTGTAAACGTCAATACAATAAAAAAGACTAAGATCTCAAACCCAATTTTACACATTAAGGAACTAGAAAAAGTATTAAGACAGCAAACTAAACCCAAAGTTAGCAGAAGGAAGGAAATAATAAAGATTAAAGCAGAAATAGAGAACAGAATAAGAACAGAGAAAAATACAATGAATAAACCAGATGACAAAGTTGATTCTTTAAAAAAATCAACAGGAGGTAATTGGCAAACTTTTGGCTACCTAAAAAAATATACAGAGAAAACTCAAAAAATAAAAAGGCCATCTCTACTAGAGAACTACAAAAACGACTTTCTTAAAACGAAAGAAATAGCAAGAGGACAAATAAAAGAGTACTATAAACGACTGTATGCCAACAAATTGGATTATCTAGATGAAATGGATAAATTCCTAGAAACACACAACCTACCAAGACTGAATTATGAAGAAACAGAAGATCTGAATAGACCTATAACTAGTAAGGATTTGAATTCTAGTAATCAAAAACCTCCCAACAAAGTAAAGCCCAGGCCAGACGGCTTCACAGGAGAATTCTATATGAATTCTTCTCAAACATTTAAAGAAGAATTAACACCAATCTTTCTCAAACTCTTCCAAAAAACTGAAGAGGAGAGGAACACTTCCAACTCATTCTATGAGATGAGGCCAGCCAGCATTGATACCCTGATACCAAAGCCAGACAAAGGCACTACCCTACAAGAAAACTATAGAGCAATATCCCTTATGAATATTGATGCAAAAATCCTCAACTCACATATGCCATGCAAAATACTAGCAAACCAAAGTTTCGGCAGCGTAGCAAATAGCAGAAAAGGATTATACAAGATGACCATACATCATGACAAGTGGAATTTATTCCTGGAATGCAAGATGGTTCAAACATATGAAAATCAATTAATGTACGTACGCCATATGAACAGAATAAAGGAGAAAAAAAATGATCATCTCAACTGATGCAGAAAAGCATCTGACAAAATTCAACACCCTTTCATGATTAAAAATCTAAAAAAGAATGGAAGGAAACTTAAACTCACCAACATAATAAAGGCCATATATGAAAAACCCACAACTAACATCATACTCAATGGTGAAAATGAAAGACTGAAAGCTCACTTTCCCCTAAGAAAATCAAGGAACAAGCAAATATGCCCGCTTTCACCACTTCTATTCAACACAGTATTGGAAGCTCTAGCCAGAGCAATCAAGGCAAGAAAAATAAATAAAAGGCATCCAAATTGGAAAGGAAGAAGTGAAAATTCATCTCTGTTAGAAGATGACATGATTGTATATGTAGAGAACCCTAGAGATTCCACAAAAAGTGTTAGAGCTAAAATTAACTCAGCAAAAATCAACACAACAAAATCAACATGCAAAAATCAGCTGCGTTTCTACACACTAACAATGAACAATCTGAAAAGGAAAATTAAGAAAACAATTCCATTTACAATGGCATCAAAAAGAATAAAATACTTAGAAATAAACTTAACCAACAAGGCGATAAAAGTCTTGTACACTGAAAACTACAAAACATCACTGAAAAATATTAAGGAAGACATAAATAAATGGAAAGACATCCCATGTTCATGGATTGGAAGACTTAATATTGTTAAGCTGGAAGGAAGACTTAATTTAAAAGATGACAATACTACCCGAATACAATACTACCCAAAGAGCTATCTACGGATTCAATGCAATCCCTATCAAAATCCCAATTGGCGTTTTTTCAGAAGCGAAAAGCCCATCCTAAAATTCATGTGGAATCTCAAAGGACCCCTAGAAATAGCCAAAACAATCTTAAAAAAGCAGAAGAACAAAGTTGGAGGACTCACACTTCCCAATTTCAAACCTTACTACAAAAGCTACAATAACCAAAAAAGTATGGACTAGAACAATGACAGACATATAGACCAATGGAACAGAATTGACAGTCCAGAAATAAACCCATACATTTATGGTCAACTGATTTTTTATATGAGTGCCAATACCATTCAATGGGGAAAGAGAAGTTTTTTTCAACAAATGGTGCTGAGACAACTGGATATCCACCTTAAAAAAGAAGAAGTTGGATACTATCTCATACCATATTTACAAAAAGTTAACATAAAAATGGATCAGAGACCTAAATTTAAGAGTGAAAATAAAATTCTTAGAATTAAAGAACAAAACGTAAGAACTAAAAATGTAGGCTACGAAAAAAACAATCTTCATGACCTTGGGTTTGGCAATGGTTCCTTAAATATATACCAAAAGCACAGGCAACAAAAGAAAACAATAAAAGATACATTGGGCTTTATAAAAATTAAAAACTTTTGTGCTTCAAAGGACACCATCAAGGACATGAAATGACAACCCACAGAATGGGAGAAAATATTTACAAATCATATATCTGGTAAGGGTTTAATATCCAGAATATATAAAGAACTACTACAACTCAACAACAAAAAACAAACACCAATTCAAAGCAAAAGACTTGGCCATAGAAGATATACAAATGGCCAAAAGCACATGAAAAGATGCTCAACATCACTAGCCACTGGGGAAATGCAAATCAAAATCACAATGAGATACCACTTCACACTCGAGCTAAAAATAAAAAGTGTTGGTAGAGGATGTGGAGAAATTGTAACCCTTGTACATTGCTGGTGGGAATATAAAATGGTGCAGCTGCTGTGGAAAACAGTATGGCAGTTCCTCAAAAAATTAAACATAGAATTACCATATTATCCAGGAATTCCACTCCTAGGTATATACTCAAAAGAACTGATAGCAGAGACTCAAACAGGTATTTGTACACCAACATTCATAGCAGCATTATTCACAACAGCCAGAAGGTGGCAACAATCCAAATGTCCATCAACAGATGTTCCAAATGGATATAAAACATGGTATATACATACAATGGAATATTATTCAGCCTTAAAAAGGAATGAAATTCTTATACCTGCTAGAACATGAATGAACCTTGAAAACATTATGCTAAGTAGAATAAGCCAGACACAAAAGGACGAATATTGTATGATTCCACTTATACAAGATACCCAGAATAGGCAAATTCATAGAGACAAAAAATAGAATAGAGGTTACCAGGGGCTGGCGGGAGAAGGAATGGGGAGTTACTGTTTAATGGGTACAGAGTTTCTGTTTGGGATGATGAAAAAGTTTTGGAAATGGATAGTGGTGATGGTTGCACAACATTGTAGAATATACTTAATGCCACTGAACTGTACACTTAAAAAGGGTTTGGTAAAAATTTTATGTTATGTACATTTTACCACAATTTTGAAAAAAATATTAGAAGAAAATTTTCCTAATTTGATAAATGACATCTACATAAAAAAACCTACAGCAAACATCATACTTAATGGTAAAAATATTGAAAGCTTTCTCCTCGATACCAGAATCGAAATAAGGATGCCTATTATCACCACTTCCATTCAATATTATGCTGGAAGTCCTTGCCATTGCAATAAAAGCAAGAAAAAAGATATAAGTATTGGAAAGGAAGATATAAAACTGTTATTATTTATAGAAAACATGATCGTGTATGTTAAAAAATTAAAAAATTCAATAGATAAACTATCAGAATTAATAAGTAAATTTAACAAAGGTTGTATAATATATAGAAAAAATCAATTATACTTCTATATGACAAATAAATAATTAGAAATGAAAAAATTAAATATCACTTACAATAGTATCAAAAAACATAAAACACATAGAAATAAATCTAATTTTAAAAGTGTAAGACTGCTACACAGACGACTAAAAGCATTCTTGAACGAAATTTATTAAGACCTAGATAAATGGAGGAGTATATCTTGTTCATGGATTGGAAAACTCAATATTGTAAAGATGTCAATTTTCCTCAAATTGACCTACATATTTTTGATGCAGTCTCAATCAAAATCTCAGCAGGGTTTTTGTGGAATTTCAAAAGCCGATTCTAAAATTTATATGGAAATGCAAAAAGCCAAAAATAAAACAAGAGTCTTGAAGAAGAACAAAACTAGAAGGATTTACACTACCAGATATCAAGACTACATATATAAAGCTATAGTAATTAAGCTATAAAGCTTGTATTGGTACAAGGACAGTCAAATACCAATAGAATTGCATATACATATATGTACACCAAAAGACACACACACAAATGTTCATAACAGCCTCTTTCGTAATAAGCCAAAAATGGAAGCAACCCAATCGTCCATCAACAGTAGAATGGGTAAATTGTGGTATATTCACACCATGGAATACTATGCAGTAATGAAAATGAGATACCTAGAATAGGCAAATTCATAGAGACAGAAAGTAGATTAGAGGTTACCAGAGGCAGGGGGGAGGGGGGAATGGGAAGTTATTGTTTAATGGGTACAGAGTTTCTGTTGGGGGTAATAAAATGTTCTGGAAATAGATAGTGGTGATGGTTGTACAACACTGTGAATGTACTTAATGCCACTGAATTGTACACTTAAAAATGGTTAAAATGGCAAATTTTATTTTACGTATGTTTTCCCTCAATAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MB4.ORF1.hs6_sqmonkey.marg,L1MB4.ORF2.hs7_bushaby.marg,1325,1952,2458,7651,7904,253
L1MC2,GGGGAAACTGAGGTACCCGACTTCTGCTCACACTAGACTTCCTGCTTCACCTAAGAGAAGAAATACCTGAGAAGCACTTGTGAAGGTCACAGCCAGAAGGGCACAGCCACCCTGAATGACAGAGCTCTAATCATAGGATTACAGAGCACTTTCCACTGCCCACACCTTCCCACCACATCAGCGGGGCTCCTGAATAATAACAAGGCTTTACAGAACTGCAAGCCTCAGACACTACTTAAGAAGGAGCCTCTAAGAAAACCCAGAGATAACAGAGGAGACAAAACCAAGGATATTAGAAGAAATTTCTAGAGGAAATTCTAAACTATAACAAATAAAAATAAAGATAACAATAAAAACAACAAAATCATAAAAAGATAAACATAAAATCTAACATTAAAGGAATATTTATCATCTAATACTTTGTATAGCGTTTTCTAAAAAAATTAAAAAAGCGTCAAAAAGAGAAAGAAGAGTTTGAATAATCAAAGTAATATCAGAATCGGAATTCAAAACAGTCATGGTTTTTAAAATGTAGGGGACGTCAAAATAAATAGAAACATTCTAACATTAAAAAAGCACACCGGATAAAAGAAAAAGGACGTATGGAGAACCTAGCAAAAAATCAATACCAAAAAGCAACAAAAGGATATGCAAGACATCAAAAACACTGTAACAGGAATGTAACATGCCTTTGATAGAATCATCAGTAGACTGGACAGGAACTAGAAAAGAATCAATGAGCTTGTGGTCATGTGAATGGGAACTTTCCAAACTGAGATGCAAAGAGAAAAAAATGTAAAAACAAAGGATTACAATATTCTAGAACTATCGGAGATTTTAAATGTGTAAATCGAATGCCACCATAAAGAGTAGAAGAAAAAGAAATTGAGTAATGAGCAGAAAGGATAGTAATAATATGAAATACTTCCAGTATTAAATTACTGATTACAAAATCGTATCAAAGAACCAGGAATACTAATAGGCAATCCACTATCAAAATATAAAATAACGAAACTAAAATAATGAATACAAGAATGACAACAAGAAAAGAACTACCCCCTCTAGATACAGAGTTAAACACTAAATTCAAAATTTCAAAAGGCAAGCAAACTATAATAATGTTAGAAGGAAGGGAGGTTGTACAAGAGATCAAAAACACTGTAACAAAAATGAAGAATGCCTTTGATGGGCTCATCAGTAGACTGGACATGACTAAGAAAAGAATCAATGAGCTAAAGGATATATCAACAGAAATCTCCAAAGTGGAAAGCAAAAAAGAAAAAAAAATTAAAAGTGAAGAAAATATAATAGAACTATGGAAGAACTACAAAAGGTATAACATATGTATAATGAATGGACAAAACGGAAAGGAAAAAGAAAAAGGAACAGGAAAAATATTTGAAATAATAATGGCTGAAAATTTTCTAAAATTAATGACAGACACCAAACCACACAGATCCAGGAAACATAGAGAACACAAAATAAAAATAAATAACAAAAAAAATACACCTAAGCACATCATATTCAAACTGCAGAAAATAAAAGACAAAAAAATCTTGAAAGAAGTCAGAGGAAATAAACACATAACCTATAGAGGAACAAAGATAAAAATTACATCAAACTTTTCAGAAACCATGCAAACAAGAAGATGGAGTGAAATATTTAAAGTGTTGAAAGAAAAAAAAATCCAACCTAGAATTCTGTATCCAGTAAAATTATCCTTCAAAAGTGAAAGAGAAACAAAAACTTTCTCACAAAAATATAAATTAAAGGAAATTGGTGGAAGTACATGGATCTTGCAAGAATTATTTAGTTCTTCAGAGAGAAGGGAAATGATATAGGTCACAAACTCAGATCTACATAAAGAAAGGAAAAACATTGGGGAAGGAAAAAATGAAAGGTAAAAACAAAATATTTTCTTTTTATATTCTTAATTGATCTAACAGATAAGTTTTTTCAAAGTAATAATAGTAACAATGTATTGGGTAATTATAGTTTATGGATAAGTGAAATAAATGACAGCAATGTTATAAGAAAAGGGGGAAAGAATTAGGAATACTCTGTTATAAGGTACTTGCATTACCCATAAGTAGTATAGTGTTATTTTAAAGTGGACTTAGATTAGTTGTAAATGTATATTGCAAACTCTAGGGCAACCACTAAAAAATTTTTTAAAAAAAAATTGAAATGCTAAGAGAAGAGAGAAAATGGAATCATATAAAATGCTCAATTAAAACCAGAGAAGGCAGAAAAAGAGTGGAAGGCAAAATAAAAAAAAGAAACAAAGAACAAGGGCAATGAATAGAAAACAGTTACACATATGGTAAATTATTAATCCAACTATATTAATAATCACTTTAAATATGGTAGATATTAATCCAAATATATCAATAATCACTTTAAATGTGAACAGTCTAAATACACCAATTAAAATACAGAGACTGTCAGAAGTAGATTTTAAAAAAACTAGACCCAACTGTACACTGTATATAGGTTATAAGAAATCCACTTTAAATATAAAGACAGAGATACAGTTAAAAGTTAAGGGAATATGGAAAAAGATATATCATACTAACGCTAATCAAAAGAAAAGCCGAAGTAGCTATATTAATTTCAAGATAAAGCAGACTTCAGAGCAAGGAAAATTATCAGGAATAAAAGAGGGGCATTACATAATGATAAAAGGATCAATTCTCCAAGAAGACATAACAATCCTTAATGTGTATATGCCTAATAACAGAGCATCAAAATACATGAGGCAAAAACTGATAAAACTACAAGGAGAAATAGATGAATCTACTATTATAATTGGATATTTCAATACTCCTGTTTCAGTAATTGACAGATCCAGCAGGCAGAAAATTGGTAAGGATGTAGTTGAACTGAACCGCTTAATGAATCAACAGGATCTAATTGACATTTATGGAATATATCATCCAACAACAAAAGCAGAATACACATTTTTCTCAAGTTCACATGGAACATTCATTAAGATAGACCACATTCTGGGCAATAAAAGAAAGCTTAACAAATTCAAAAGAATAGAAATCATACAAAATATGTGCTTAGAGGACCACAATTGAATTAAATTAGAAATCACTAATACATACCAAATATTTACAGATAGCTGGAATCTTAGAAAAATTCTAAACATAATGGAGATTAAACAACACACTTCTAAAATCAAACATATGACTCAAAGAAGAATCTCAAGAAAAATTAAAAACTATTTTGGGCTAAATGAAAATGAAAATACAATATATCAAAATTTCTGGTATGCAGCAAAAACAGTGCTTAAAGAGAAATTTATAGCATTGAATGCATATATTAGAAAAGAAGAAAAACCTCTGAAAATAAATAATCTAAGCTTCCACATTAGGAAAAAACTAGAAAAAGAAGATCAAATTAAATCCAAAGTAAGCAGAAGAAAAGAATTAATAAATTTAGAGCAGAAAAAAATGAAAATGCAGAAATCAACAGAAAAATCAAAAAAACCAAAAACTGGTTCTTGGTTTTTTAAAACGATCAATAAAATTGATAAATCTCTAGCCAGGTTTTGGCTAACCAAGAAAAAAAGAGAGGAGAAGACACAAATTACTAATATCAGAAATGAAAGAGGGACCATCACTACTGATCCCATGGACATTAAAAGGATAATAAATAAAAAAAAGGAAAATTATGAAAACTCTCTCTACCTCAAATTATTTAATAACTTAGATAAGGAAATGGCCCAATTCCTTGAAAGAACTATCTACCACAATCTACCAAACTCTAAACTCACACCAGGAGAAATAGATAATCTGAATAGGCCTATATACATATATATATCTATTAAAGAAATTGAATCAATAATTAATAACCTTCCAAAACAAAAAGCACCAAGCCCAGATGGATTCACTGACAAATTCTACCAAATATTTAAGGAAGAAATTATACCAATTCTATATAATCTCTTCCAAAAAATAGTAAAGAGAAGAATTTCTAATGTAACACTTTCTAACTCATTCTATGAGGCCAGCATTACCCTAATACCAAAAAAACAGACAAAGACATTACAAGAAAGAAAACTATACAGACAGACCAATATCTCTCATGAATATAGATACGCAAAAATCCTCAACAAAAAAAATATTAGCAAATCAAATCCAAGAATATAAGAAAGAATTATACACCATGACCAAGTGGGATTTATTCCAGGTATGCAAGGCTGGTTCAACATTTGAAAATCAATTAATATAATCAATCACTACCCTGTAATCAACAGGCTAAAGAAGAAAAATCACATGATCATCAATATAGAATGCGGAAAAACCATTAGCCAAAACCAACCACCCATTCATATTAAAAAATTCCCAGTACAAACTAGGAATAGAGGAAAACTTCCTCAACTTGATAAAGAAGGAAACTCCCTCAACGTGATAAAGAATTATCTAAAAAAACCTACAGCTAACATTCATCTTAATTGTGAGAAACTAGATGCTTTCCCACTAAGAATAGGAACAAGACAAGGATGTCCCATCACCCCTCTCACCACTCCTCGCGACCTCATCACCTCCCAAAGGCCCCACCTCTTAATACTATTGCACTGGGGATTAAGTTTTCAACAGTATGAATTTTGGAGGGACACACGCATTCAGACTATAGCACCACTCCTATTCAACATCCTACTGAAGGAAGTCCTAGCTAATGCAATAAGACAAGAAAAGAAAATAAAAAGTATACAGATTGAGAAGGAACAAATAAAACTATCTTTGTTCTTTTCACAGATGACAGATGACATTTTATGTAAAAAATCCACCAAAGAATCAACAGAAAGACTCCTGGAACTAATACCTGCAATAAGTGATTATAGAAAGGTTGCAGGATACAAGGTTAATATACAAAAGTCATTTCTTTCCTATTATACCAGCAATGAACAACTGGAATTTGAAATTAAAAATGTAACACCATTTACATTAACACCACCCCCAAAAATGGAAAAACTAAGTATTAATTTTAAATATAAACAAAAATATGTATTAGATCTATATAAGGAAAACTATAAAACTCTGATGAAAGAAATCAAAGAAGATCTAAATAAATGGAGAGATATTCCATGTTCACGGATATAGATAGGAAGACTCAATATTGTCAAGATGTCAGTTCTTCCCAACTTGATCTATAGATTCAATGCAATTCCAATTAAAATCCCAGCAAGTTATTTTGTGGATATGAACAAACTGATTCTAAAGTTTATATTAAAAGGCTATATGCAAAAGACCCAGAATAGCCAACACAATACTGAAGAAGAAAAACAAAGTTGGAAGACTGACACTACTCAAATTCAAGACATATTATACTATAAAGCTACAGTAATCAAGACAGTGTGGTTTTGCGATAAAAGAATAATAATAAATCAATGGAACTGAATAGAGAGCCCAGAAATAGACCCACACAAATATAGCCAACTGATCTTTGACAAAAAGGAAGCAAAGACAATTCAATGAAAAAAAAGGATAAATTTCTTTATAGTCTTTTCAACAAATGGTGTTGGAACAACTGGACATCCAATGCCCCTCCTCCTACATGCAAAAAAAATCAAATCTAAACACATACCTTACACTATTTCACAAAAATTAACTACAAAATGGATCACAGACCTAAATGTAAAATGCAAAACTATAAACTGTAATAAAAATAAAAAAAAAAAACTCCTAGAAGATAACATAAAAGAGGAAAAAAATCTAGGTGACCTTGGGTTTGGCGATGAGTTTTTAGATAGAACACCAAAAGCACTATCCACGAAAAAAAAAATAAACAATAAGTTGGAAATTATTATTAAAATTAAAAACTTCTGCTCTGTGAAAGACACTGTTAAGAGAATGAAAAAGCCAAGCCAAGAGACTGAGAGAAAATATTTGTCGCAAAACACATATCTGATAAAGGATAAAGGACTGTTATCCAAAATATACAAAGAACTCTTGAAAATACAAAAATTCCGAGATCACATCACTGCAAAACACAACAATAAGAAAATAAAAAATGACATATTTAAAAAATGGGCAAAAGATCTGAACAGACATCTCACCAAAGAAGTTATATAGATGGCAAATAAGCATATGAAAAGATACTCAACATCATATGTCATTAGGGAATTGCAAATTAAAACAACAATAGGAGATGGAGATACAACTACACACTACTATTACATACCTATTAGAATGGCTAAAATCCAAAGCACTGACAACACCAAATGCCGGCGAGGATGTGGAACAACAGGAATTCTCATTATTTGTGGGTGGAATGCAAAATGGTATACCCACTTTGGAACTTTGGAAGACAGTTTGGCAGTTTCTTACAAAGCAAAACATACTCTTACCAAATACGATCCAGCAATCATGCTCCTTGGTATTTACCCAAATGAGTTGAAAACTTATGTCCACACAAAAACATGCAAATAAATGTTTATAGCAGCTTTATTCATAATTGCCAAAACGTGGAAGCACAACCAAGATGTCCTTCAATAGGTGAATGGATAAATTGAAACTGTCATACAATGGAATATTATTCAGTGATAAAAAGAAATGAGCTGTCAAGCCATGAAAGACAATGGAATAACCTTAAATGCATATTACTAAGTGAAAGAAGCCAATCTGAAAAGGCTACATACTACATACTGTATGATTCCAACTATATGACATTCTGGAAAAGGCAAAACTATAGAGACAGTAAAAAGATCAGTGGTTGCCAGGGGTTTGGGGGGGGGGAGGGATGAATAGGTGGAGCACAGGGGATTTTTAGGGCAGTGAAACTATTCTGTATGATACTGTAATGGTGGATACATGACATTATGCATTTGTCAAAACCCATAGAACTGTACAACACAAAGAGTGAACCCTAATGTAAACTATGGACTTTAGTTAATAATAATGTATCAATATTGGTTCATCAATTGTAACAAATGTACCACACTAATGCAAGATGTTAATAATAGGGGAAATTGTGTGGGGGGGGGGGGGAGGGGGGGGATGGAAGAAGGAGGGGAAATAATAATTAGGGGAAATAATAATTAGGGAAGATGGTATATCTGGGCACTCTCTGTACTTTCTGCTCAATTTTTCTGTAAACCTAAAACTGCTCTAAAAAATAAAGTTTATTT,ORF1 and ORF2 replaced with MACSE reconstructions,L1MC2.ORF1.hs3_orang.pars,L1MC2.ORF2.hs8_ctshrew.marg,1134,1811,2363,6649,7138,489
L1MB5,CCGTTCCAAGATGGCCGAATAGGAACAGCTCCGGTCTGCAATTCCCAGCATGATCGAGACAGAAGACAGGTGATTTCTGCATTTCCAACTGAGGTAACTGGTTCATCTCATTGGGACTGGTCGGAAAGTGGGTGCAGCCCACGGAGGGCGAGCCAAAGCAGGATGGGGCATCGCCTCACCTGGGAAGTGCAAGGGGTGGGGGGATTTCCCTTTCCTAGCCAATGGAAGCTGTGACAGACTGTACCGGGAAAATCGGGAGACTATGATTCTAAACACTGCGCTTTTCCAATGGTCTTAGCAAATGGTACACCAGGAGATTATATCCCACACCTGGCTCAGTGGGTCCCATGCCCACAGAGCCTTGCTCACTGCTAGTCCAAGATGGAACTGCAAGGTGGCAAGCCTGCCTGGGGGAGGGGCGTCTGCCATTGTTGAGGTTTGAGTAGGTAAACAAAGCAGCCTGGAAGCTTGAACTGAGTGGAGCCCACCGCAGCTCAACGAGGACCACCTGCCTCTGTAGACTCCACCTCTGGGGGCAGGGCATAGCTGAACAAAAGGCAGCAGAAACTTCTGCAGACTTAAATGTCCCTGTCTGACAGCTCTGAAGAGAGCAGTGGTTCTCCCAGCATGGTGTTTGAGGTCTGAAAAGGGACAGACTTATAAATCAACTGTCTCAAATATGCTTAAATAGTAAAAGATTAAAAGACATTGGAAAAAAAAAAAAAAAAAACTAAATAAAACTAAAAGCACAATTAATAAAAAAATAGGAAATCAATAAAAAGATAGCAATATAAAAAGTAATCAAAAATAAATTCTTGATATGAAAAGAAAAAAAATTAAAATTCAAAATTTACTAAAAAAGAACAAAAGAAAATTTAAGCAAACAAAATAAAAAAACAAAAAATAAGAAAAAAAAACAAATAAAATTAACATAAATAAAAAAGAAAAATAAATTAAAAAAAAATAAATAATATATAATAAATAAATAGAAAATCCCAAAAGGGGCGAAGAAATGAGTAAAGGCAGAAACAGAAGGGTAGGAGAGAATAAAAAAAAGAGGAAGAACGTCTTTTTAAATAATGGCACCAAACCTCCCAAAATTAAAGAAAGAAATGAAGCTACTTATTCCGATGAATTAATGAACTTTAAGTAAAAAAAACTCGAAAAAAATCCCTCTGAGATAATAGTAAATGTTGAAAGCCATAATAAAAAAGAAAATCTTGAAAGCAGCAGAATAAAAGGAAGTCGGCACAAACATGGGGAGAAACCAGAGCAGAAAAGCTGAAAATTCTAAAAAACAGAGCGCCCCTTCTTCTCCAAAGGATCGCAGTAAGAGACCAGCAACACACCAAAGCAGGAGTGAAACATTTCAAAAGCCGAAATATACAAGTGATAAAATGAAAAAAAATATTGAAACCCTCAACACAAAAATAGATCAGGCAGAAGAAAGAATTAGTGTGCTTGAAGATAGGATAATTGAAATTACAGAGGCAGAGGAGATAAAAGAAAAAAAAATAAAAAAAAATGAACAAAACCTAAAAGAAATGTGGGACAATGTCAAAATGGCAAATCTAAGATTAATTGGCCTTCAAGAAGAGGACAGAGAGAGAGGAATAATGGTAGAAAATTTATTCAATAAACATAATAATGAAAACTTTCCAAAATTGATAAAAGACATTAATCTACACATCCAAGAAGCTCAAAAAACGCCAAGCAGAATAAACTCAAAGAGAACTACACCAAGACACATAATAATCAAATTGCCAAAGGAGAAAGAGAAAGAGAGAATCCTGAAAGCAGCAAGAGAGAAGATACCTTTGATTCATTATGAAGGGGCCATCATAAATCTAACAACAGATTTTTCATCAGAAACCATAAAGGCAAGGAGACAGTGGGATGAAATATTTAAAGAGCTGAAAGAAAAAAAATTTCAACAAAAAATTCTATATTCAGCAAAACTATTCTTCAAAAATGAAGAAGAAATTAAGGCATTCCCAGATAAACAAAAGCTGAGAGAGTTTATTGCTAGTAGACCTGCCCTACAAGAGCTCCTGAAGGAAGAGTCCTTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACTAAGCAAAGAATTGAACAAAAAAATTGTCAACCGAAAATCATAAATTGAAAATAAAATTCTTCAAAACGAAGGAGAAATTAAGACATCCCTCGATAAACAAAAGATAAGTGAGTGCATTCCTTGCTGGTACACCTGCCCTATAAGAAATGCTAACAGGAGTCCTTCAAGCTGAAATGAAAGGACACTAGACAGTAACTCAAAGCTACATGAAGAAATAAAGAACACTAGCAAAGGTAACTACCTAGGTAAATATAAAATACAGTATTATTATATTTTTGATTTGTAATACCTCCTTTTCTCTATTAGATTTAAAAGACAAATGCATAAAACAATCATTATAAATCTATTTTGACGGGCACACAATGAATAAAGATGTAATTTGTGACAACAACAACATAAGGGGACGAAAGGAGCTTTTTAAGGAGAAAAGTTTTTATATATAATTGAGATTAAGTTGATATTAATTCAAACTAGATTGTTTTAAATTTAACTATGTTAATTGTAATCCGCAGGATAACCACTAAGAAAAGAAATAAAAATAAATCAATAAAAAGGAAAACAAAGAATAAAAAATGGTATTCTACAAAAAAACTATCTAAAAACAAAAGGGAGGAATTGTAGAAGAATTGAGGAACAAAAAAAAATGACATATAGCACACAAATAACAAATGACAGGAGTAAGTCCTTTCTTATCAATAATTACATTAAATGTAAATGGATTAAACTCTCCAATTAAAAGACAAAAATTGGCAAAATGGATTAAAAAACAAGATCCATCTATATGCTGTCTACAAGAGATTCACTTTAGATCCAAAGACACAAATAGGTTGAAAGTAAAAGGATGGAAAAAGATATTCCATATAAAAATTAAAAACAAAAGAGAGGTAGGAGTGGCTATACTAATATCAGACAAAATAGACTTTAAGTCAAAAATTATTACAAGAGACAAAGAAGGACATTATATAATGATAAAAGGGTCAATTCATCAAGAAAATATAACAATTATAAACATATATGCACCCAACAACAGAGCCCCAAAATATATAAAGCAAAAATTGACAGAATTGAAGGGAGAAATAGACAGTTCTACAATAATAGTTGGAGACTTCAATACCCCACTTTCAATAATGGATAGAACAACTAGACAGAAGATCAATAAGGAAATAGAGGACTTGAACAACACTATAAACCAAATAGATCTAACAGACATATATAGAACACTCCACCCAACAACAGCAGAATATACATTCTTCTCAAGTGCACATGGAACATTCTCCAGAATAGACCATATGTTAGGCCACAAAACAAGTCTTAATAAATTTAAAAAAATTGAAATCATACAAAGTATATTCTCTGACCACAATGGAATGAAACTAGAAATCAATAACAGAAGAAAAACTGGAAAATTCACAAATATGTGGAAATTAAACAACATACTCTTAAATAACCAGTGGGTCAAAAAAGAAATCAAAAGGGAAATTAGAAAATACTTTGAGATAAATGAAAATAAAAACACAACATACCAAAACTTATGGGATGCAGTAAAAGCAGTGCTCAGAGGGAAATTTATAGCTGTAAATACCTACATTAAAAAAGAAGAAAGATCTCAAATCAATAACCTAACTTTACACCTTAAGGAACTAGAAAAAGAAAAACAAAATAAACCCAAAGCTAGCAGAAGGAATAAAATAATAAAGATTAGAGCAGAAATAAATAAAATAGAATATAAAAAAACAATAGAAAAAATTAATTTTTTTAAAAAGATCAACAAAATTGACAAACTTTTAGCTAGACTGACAAAGAAAAAAAAAAGAGAAAAGACTCAAATTACTAAAATCAGAAATAAAAATGGGGACATTACTACTAACCTTACAGAAATAAAAAGGATTATAAGAGAATACTATGAACAATTGTATGCCAACAAATTAGATAACCTAGATGAAATAGACAAATTCCTAAAAACACACAAACTACCAAAACTGACTCAAGAAGAAATAGAAAATCTGAATAGACCTATAACAAGTAAAGAGATTGAATCAGTAATAAAAAAATTTCCCACAAAAAAAAACCCAGGACCAGATAGCTTCACTGGTGAATTCTACCAAACATTTAAAAAAAAAATAAAAATCATTTTTCTTCAAATTTTTCAAAAAATAGAAAAGGAAGGAATACTTCCTAACTCATTCTATGAGGCCAGCATTACCCTGATACCAAAGCCAGACAAAGATATCACAAGAAAAAAATACAGACCAATATCCCTTATGAATATAGATGCAAAAATCCTCAACAAAATACTAGCAAACCTAGAATCCCAGAAGAAAATAAAAAGAATTATACACCATAACCAAGTGAGGTTTATTCCAGGAAAGCAAGGGTTGTTTAAATTCAAAAAAAAAAAATTAATCAATGTAATACACCACATTAATAGAATAAAGGAAAAAACCCATATAATTATCTCAATTGATGCAGAAAAAGTATTTAACAAAATCCAACAACCTTTCATGATTAAAACACTCAACAAACTAGGAATAGAAGAGAACTTTCTCAACATGATAAAGGGCATTTATGAAAAACCCACAGCTAACATCATACTCAATGGTAAAAGACTGAAAGCTTTTCCCCTAAGATCAGGAACAAGACAAGGATGCCCACTTTCACCACTTCTATTCAACATTGTATTGGAAGTTCTAGCCAGAGCAATTAGGCAAGAAAAAAAAATAAAAGGCATCCAAATTGGAAAGGAAGAAGTAAAACTATCTCTATTTGCAGATGACATGATCTTATATATAGAAAAAACTAAAGAAACAACAAAAAAACTAATAAAACTAATAAACAAATTCAGCAAAGTTGCAGGATACAAGATCAACATACAAAAATCAGTTGTATTTTTATATACACCTAAAAAAAAAAATCTAAAAAATAAAATTAAAAAAACAATTCCATTTATAATAGCATTAAAAAGAATAAAATACTTAGGAATAAATTTAACCAAGGAGGTGAAAGACTTGTACACTGAAAACTACAAAACATTGCTGAAAGAAATTAAAGAAGACCTAAATAAATGGAAAAACATCCCATATTCATGGATTGGAAGACTTAATATTGTTAAGATGACAATACTCCCCAAAGTGATCTACAGATTCAATGCAATCTCTATCAAAATCCCAATGACCTTTTTTGCAGAAATGGAAAAGCTGACTCTAAAATTCATATGGAATTTCAAGGGACCCAAAATAGCCAAAACAATTTTAAAAAAGAAGAACAAAGTTGAAGAACTCATACTTCCTCATTTCAAAACTTACTACAAAACTACAGTAATCAAAACAATGTGGTTCTAGCATAAGGATAGACATATAGATCAATGGAATAGAATTGAGAGTCCAGAAATAAACCCATACATCTATGGTCAATTGATTTTAAACAGGGTTCCAAGAACATTCAATGGGGAAAGAATAGTCTCTTTAACAAATGGTGCTGGGGAAACATGGATATCCACATGCAAAAAAATGAAATTGGACCCCTTCCTCACCCCATATACAAAAATTAATTCAAAATGGATCAAAGACCTAAATATAAGAGCTAAAACTATAAAACTCTTAGAAGAAAACATAGGGATAAATCTTCATGACCTTGGATTTGGCAATGGTTTCTTAGATATAACACCAAAAACAATAGCCAAAAAAGAAAAAATAGATAAATTGGACTTAATAAAAATTAAAAATTTTTGTATAAAAAAAAAAATTATCAAGAAAGTGAAAAGACAACTTACAGAAGGGGAAAAAATATTTGCAAATTATATATCTGATAAGGGTCTAGTATCCAGAATATATAAAAAACTCTTAAAAAATCAAAAAAAAAAAAAAAAAACCCCAATTATAAAATGGGCAAAATATTTGAATAGATATTTTTTCAAAGAAGATATACAAATGGCCAAGAAGCACATGAAAAGATGCTCAACATCATTAATCATTAGGGAAATGAAAATCAAAACCACAATGAGATACCACTTCACACCCAATAGGATGGCTATAATTTTTATTAAAAAAAATAAGGAAAAAGGGTAAATAACAAGGGTTAGGATGTGGAGAAAGAAGCTAGTATGGATAGGAGGTGGAGAAATTGGAACTCTATTACATTGGCGGGTGAGGAATGTAAAATGGTACAGCCATTGTGGAAAACAGTTTGGCAGTTCCTCAAAAAGTTAAACATAGAATTACTATATGACCCAGCAATTCCACTTCTAGGTATATACCCAAAAGAAATAAAAACATGTTTACACAGATACTTGTGCACCAGTATGTTTAACAAAACCTTGTACATGAATGTTCATAGCAGCATTATTCACAATAGCCAAAAGGCAGAGAAACAACCCAAATGCCCATCAACAAATGAATGGATAAATAAAATGTGGTATATACATACAATGGAATATTATTCAGCCATAAAAAGGAATAAAGTACTGATACATGTTACAACGTGGATGAACCTTGAAAACATTATGCTAAATGAAAGAAGCCAGAACCAAAAGGCCAATATTGTATGATTCCATTCAATGAAATATCCAGAATAGGCAAATCCATAGAGACAGAAAGCAGATTGGTGGTTGCCAGGGGCTGGGGGGAGGGGGGAATGGGGAGTGACTGCTTAATGGGTACGGGGTTTTCTTTTGGGGTGATGAAAATGTTTTGGAATTAGATAGAGGTGGTGGTTGCACAACATTGTGAATGTACTAAATGCCACTGAATTGTACACTTTAAAATGGTTAATTTTATGTTATATGAATTTCACCTCAATTAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MB5.ORF1.hs3_orang.marg,L1MB5.ORF2.hs2_gorilla.pars,1256,2123,2779,6662,6909,247
L1MA10,ACATCAAGAGACATCAGGAAATTGGCAGAATTGGAGGCTCTAGCCTTCATACTCCCAGTATTGGCAACCATCCACAGACATGAATATCTTTATGGAAGCCACAGAATCTAATTAAGAGGTTCCAACACCTCAATGGGACCAAAAATTCAAGAATAGATTCATTGAAGAAATTAAAAAAACTAATTTCACTTAACCTTTGTCACCTCTATCCTAAGATAGCACAGGCTCAGTGCTAAGAGAGGTTCCCTCAGCCCACAATTTCTCCCACATTAAATGAAAGAATCAAAGTAAACACCTGGCTTCCCAGCCTTGTTGAATACTTCTCAGGATGCCCACTTCTCAATGTTTCAGGTAGGTCTTGTGGGACCCAAAACACTAAGAGGAACAGCATGGCTAAATCATCTGGGGACAACTAAGAGCAGTGAAAAGGGGAAAAAATACACAGCAACTGCCACACAGTTCTCAACATCCAGTTGCCAATACTCCCAACGTACTCATGGACTTCATCAAGAGGTCCATCTGTAAACCCCACAGGATGTCCTGCCTGAAGATCCCTTGACCAGCCAATCTGCAGCCAGATAATCTGCCCCAAACCTCTAGTGAGTTGCACCATGGGCATCCCATGTATGAACCATATGAACTCCTGAAGACAACACATAGATTTCAACAGCAGGTGTATATTGTTGCAACCAGCTCAACTTTGCTGGTTTAGAAGAAGGCTCACAACCTTGAAAACTTCAGAGCACTGCCATAATGAAAATAAACAAGAAGTTATCAGCACTAGTCTTGGCTTTGTAAGACTAAGTGAAGGCACACAATCCTAACTTTGCCCCTAAAAGAGGTCAAAAAAAAATGGAATGGGTGCATCAATAGTAAATGTATGAGAGACCCATAGAATGTCTAGCTAGGCTCACTGGTGAAGGTCTTTCTCTCCCAAAGCCAGTTAGTAAAGACGGAAATATAAGATGCCTGGGTGACTGCTTCTTCAAATGCAAAGACAGTAATGTAAAGATTCAAGGAACACAAAGAATCAATGAAATATGACACCACCAAAGGGACAAAATAAAGCTATAGAAATCCACATAAATGAGATATAGAAATTGAACTGCCAGAAAAAGAATTCATCTTAAAGAAACTCAATAAACCAAGAAAGATCTCAAAATAACACAGAGACTCACAAAAAAACATACTAGAGAAAAAAATGAACAAAATGAGAAGTTCAACAAAGAGATAAAAACCATAAAAAAGACCAAAATGGAATTCTTGGTGTGAAAAATATAATGTCTGAACTAAAAAATTAAAAAGATTTAAAAAAAAAATTAATTGAAGGTGAGAAAAAAAAAATTCAATGAAATAGAAAATGGATTAACAAACTTAAATAGAAAACTTTAGAAATAATCCAGTTAAAAGAAAAAAAAGGAAAAAAATCAGATAGTAAAAAAAGACTTGTAGGATTATGGGACACCATCAAGCAAACCAATATATGCATTATGGGAGTCTCAGAAGGAGAAGAGAAAAAGAAGAAGAAAGCTTATATAAATAAACAAAGACAGTCTGCAGAGCTTCTAGGAAAACAAAGAATCAAAAAAACACAATACCACCAAAAGAACAAAATAAAGCTCCAGAGACTGATCTTAAAAAAATGGATACTTATGAAATGCCATCAAGTGAACAAAGAGTAATTATCTTTAATAAAACTCAGTGAGCCACAAGAGAAAAAAATGATAGAAAACTAAATTTCATATTAGGAGAACATTGCATAAGTGAAGTTAGAATTTCAACAAAAAGATACACACCTTTAAAAAGAACCAAACATAAATTCTGGAAAATGAAAAGTAAAATTGATATACTGAAGAGTTCATCAGAGTCTCTTAATAGCAGAATTGGCCAAGCAGAAGGAAGAATTAGTGAGCTTGAAGACAGGCTATCTGAAAATACACAGTCAAAGAGGATTAAAGACAAAAGTAGGATGAAAAAGAATGAAGCATGCCTGCAGGCTCTAGAAAATAGCCTCATGAGGAATAATCATCTGAGTTATCGGCCTTAAGGAGGAGGTAGGGAAAGAGATAGGGGTATAAAGTTTATTCAGGTAATTTTAAAAATTATTACAGAAAACTTCCCAAATCTTGGAAGAGATATGAACATCCAGATCCAGGAAGCTCAAAAAATCCCAAACAAGTTTAACCCAAAGAAGTTCTCCCCAAGGCACATTATAATTAAACTATCAAAAGTCAAAGAAAAAGAAAGAATGAAAAAAGAAAAAGAAAAAAAACTCATCACATATAAAGGAGAAACCATAAGACTGTCAGCGGATTTTTTAGCAGAAACGTTACAGGCCAGGAGAGAGTGGGATGATATATTCAAAGTGCTGAAAGAAAAAAGAATGTCAGCCAAGAATACTATACCCATAAAAGATGTCCTTCAGTGAATAAAGGAAGAAAGAAAGTCTTTCCTAGACAAACAAAAGCTGAGGGATTTCATCATCACTAGACCTGCCTTACAAGAAATGCTAAAGAGAGTTCTTCAAGTAGAAATAAAACTCACTGGTAAAGGTAAGTATATAGACAAATTCAGAATGCTCTAATACTGTAATGGTGGTGTGTAAATCACTTTTAATCCTAGTATATAAGTCAAAAGACAAAAGTATTGAGAATATCTATATCCACACAAAAATTTGTTAATAAATACACAACATAAAAAGAAGTAAACTATGATATCAGTAACATAAAGTGAGGGAGGAAAACATAAAATGTTGAGTTTGTGTATGTGATTGAAGTTAAGTTATCAGCTTAAAATAGACTGTTATAACTATGAGAGGTTCAATGTAAACTTCATAGTAACTACAAAGAAAAAACCTATAGCAGATACATAAAAAAGATAAAGAGAAAAGAATCAAAGCATATCACTACAAAAAAAATCAAAAAAAATCATCACAAAGGAAGACAGCAAGAGAGGAAGAGAGGAACAAAAGAACTACAAAAGAGATAGAAAACAATTAACAAAACCTATCAATAATTACAATAAATATAAATGAATTAAATTCTCCAATCAAAAGACATAGAGTGGCTAAATTGATTAAAAAAACAAGATCCAACTATATGCTGTCTATAAGAGACTCACTTTAGCTTTAAGGACACACATAGGCTGAAAGTAAAGAAATGGAAAAAGATATTCCATGCAAATGGTAACCAAAAGAGAGCAGGAGTGGCTATACTTATATTAGATAAAATAGATTTTAAGTAAAAAACTGTCACAAAAGACAAAAAGGGTCATTATATAATGATAAAAGGGTCAATTCATCAAGAAGATATAACAATTGTAAATATATATGCACCCAACATCAGAGCACCTAAATATATAAAGCAAATATTAACAGAACTGAAGGGAGAAATAGACAGCAATACAATAATAGTAGGGGACTTCAATACCCCACTTTCAATAATGGATAGATCATCCAGACAGAAAATCAATAAGAACATTGGAATTGAACAACACTATAAACCAAATGGACCTAACAGATATATACAGAACATTTCACCCAAAAGCACCAGAATATACATTCTTCTCAAGTACACATGGAACATTCTCCAGGATAGATCACATGGTAGGCCACAAAACAAGTCTTAACAAATTTAAAAAGATTGAAATCATATCAAGTATTTTTTCTGACCACAATGAAATGAAACTAGAAATCAATAATAGAAGGAAATTGGGAAAATTCACAAATACGTGGAAATTAAACAACACATTCTTGAACAACAATTGGGTCAAAAAAGAAATAAAAAAAGAAATTAAAAAATATCTTGAAACAAATAAAAATATAACAAAAATAAACAAAAATTTTTGGGTGATAAAAAAAAGCAGTATTAAGAGGAAAGTTTATAGTGAAAACATTTTTTTTAAAAAAAAAGAAAGATCTCAAATAAACAACCTAACTTTACACCTCAAGGAACTAGAAAAAGAAAAACAAACTAAGCCCAAAGTTAGCAGAAGGAAGAAAATAATAAAAATTAGAGCAGAAATAAATGAAATAGAGAATAGAAAAACAATAGAAAAAAATAAAAAAAATAGTTTGTTTTTTGAAAAGATAAAAAAAATTGACAAACCTTTAGCTAGACTAAGAAAAAAGAGAAAAAAAACACAAATAAATAAAATCAGAAATAAAAAAGGAGACATTACAACTGATACCACAGAAATAAAAAGGATCATAAGAGACTATTATGAACAATTATATGCCAACAAATTGGATAACCTAGAAGAAATGGATAAATTCCTAGAAACATACAACCTACCAAGACTGAATCATGAAGAAATAGAAAATCTGAACAGACCAATAACAAATAAAGAGATTGAATCAATAATCAAAAACCTCCCAACAAAGAAAAGCCCAGGACCAGATGGCTTCACTGCTGAATTCTACCAAACATTTAAAGAAGAATTAATACCAATTCTTCTCAAACTCTTCCAAAAAACTGAAGAGGAGGAAACACTTCCAAACTCATTTTATGAGGCCAGCATTACCCTGATACCAAAGCCAAAAAAAACACACCAAAAAAAAAAAATACAGGTCAATATATCTAATAAACATGGATGCAAAATTTTTCAAAAAAATACTAGCAAACTGAATATTCAACAGCACATTAAAAGGATCATACACCATGATCAAGTGGGATTTATCCCTGGGATGCAAGGATGGTTCAACATATGCAAATCAATAAATGTGATACACCACATTAACAGAATGAAGAATAAAAATCACATGATCATCTCAATAGATGCAGAAAAAGCATTTGACAAAATTCAACATTCTTTCATGATAAAAACTCTTAACAAATTAGGTATAGAAGGAAAATACCTCAACATAATAAAGGCCATATATGAAAAGCCCACAGCTAACATCATACTCAATGGTGAAAAACTGAAAGCTTTTCCTCTAAGATCAGGAACAAGACAAAGATGCCCACTCTTACCACTTCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATTAGGCAAGAAAAAGAAATAAAAGGCATTCAAATTAGAAAGGAAGAAGTAAAATTATCTCTGTTTGCAGATGACATGATCTTATATATAGAAAACCCTAAAGACTCCATCAAAAAACTTTTAGAACTAAATAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTTGTGTTTCTATATACAAAAATAAACTATCTAAAAAAAAAATTAAAAAAAATAATCCCATTTACAATAGCATCAAAAAGAATAAAATACTTAGGAATAAATTTAACCAAGGAGGTGAAAGATCTATACACTGAAAACTATAAAACATTGATGAAAGAAATTAAAGAAGACACAAATAAATGGAAAGATATCTCATGTTCATGGATTGGAAGAATTAATATTGTTAAAATGTACACAATACCAAAAGTCTATTCAATTCAATTCAATCTCTAATAAAATTCCAAAGACTTTTTAAAAAAAATAAAAAAAAAAACTAAAATTCATATGGAACCACAAAACCTTCTAATAGCCAAAGCAATCTTAAGTAAAAAAAACAAAGCTGGAGGCATCATACTTCCTGATTTCAAAATATATTACAAAGCTATAGTAATCAAAACAGTATGGTACTGGCATAAAAACAGACATATAGACCAATGGAACAGAATAGAGAGCCCAGAAATAAACCCACACATATATAGTCAATAATTTTGAACAAGGGTGCCAAAATTAAACAAGGGGAAAAGATAGTCTCTTCAATAAATTGTGTTGGGAAAACTGGATATCCACATGCAAAAGAATGAAATTGGACCCTTATCTTAAAACATATACAAAAATCAACTCAAAATGGATTAAAGACTTAAATGTAAGACCTGAAACCATAAAACTCCTAGAAGAAAACATAGGGAAAACTCCTTGACATTGACCTTGGCAATGATTTTTTGGATATGACACCAAAAGCACAGGCAAAAAAAGCAAAAATAAAAAAATTGGGATTAAATCAACTAAAAAAGTTCTGCACAACAAAAGAAACAATCAACAAAAAAAAAAGGAACCTAAAAAATAGGGAGAAAATATTTGCAAATCATATATCTGATAAGGGGTTAATATCCAAAATATATAAGGAACTCCTACAACTCAATAGAAAAAAAACAAAATTAAAAATGGGCAAAAAAACTACAATAGACCTGAATAGACATTTCTCCAAAGAAGACATACAAATGGCCAACAGGTATATGAAAAGATGCTCAACATCACTAATCATCAGGGAAATGCAAATCAAAACCACAATGAGATATCACCTCACACCTGTTAGGATGGCTATTATAAAAAAAAAAAAAAAAACAAGTGTTGGTGAGGATGTGGAGAAAAGGGAACCCTTGTACACTGTTGGTGGGAATGTAAATTGGTACAGCCATTATGGAAAAAAGGATAGGGGTTTTCTTAAAAAATTAAAAATAAAACTATCATATATGAATCCAGCAATCCCATTTCTGAGTATATATCCAAAAGAATTGAAATCAGGATCTCAAAAAGATATCTGCACTCCCATGTTCATTGCAGCATTATTCACAATAGCCAAGATATGGAAACAACCTAAATGTCCATCAATGGATGAATGGATAAAGAAAATGTGGTATATACACACAATGGAATATTATTCAGCCTTAAAAAAGAAAGAAATCCTGCCATTTGTGACAACATGGATGAACCTGGAGAACATTATGCTAAGTGAAATAAGCCAGACACAGAAAGAAAAATACTACATGATCTCACTTATATGTGGAAATCTAAAATAGTCAAACTCATAGAAGCAGAGAGTAGAATGGTGGTTGCCAGGGGCTGGGGGGGGGGGGAAATGGGGAGGTGTTGTTCAATGGGTACAAAGTTTCAGTTATGCAAGATGAATAAGTTCTGGAGATCTGCTGTACAACATAGTGCCTATAGTTAACAATACTGTATTGTACTTTAAAAATTTGCTAAGAGGGTAGATCTTATGTTAAGTGTTCTTACCACAAAAAAAACAAATTATAAATACATAAAAACCAATATAATAAGGAGGGGCAGGAGGAAACTTTTGGAGGTGATGTATATGTTTATGGCCTTGATTATGGTGATGGTTTCATGGGTATATACTTATCTCCAAACTCATCAAGTTGTCTACATTAAATATGTACAGTTTTTGTATGTCAATCATACCTCAATAAAGCTGTTTAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MA10.ORF1.hs1_chimp.marg,L1MA10.ORF2.hs3_orang.pars,1543,2533,3003,6792,7226,434
L1MD1,TAGAAGAAGTATTTTTTATTATTCTTTTTAATAAAAACAAAAAAAATCAATATAAAATATAAAAAAAACAAAAAAAAAATTATAAAAGGAGAAAAAAAAACGGAAAACAATCAAGGAAATTAGAAATCAAAAAATAACATGGTGATGAGTACCCTGGGTTTTCTTTTTGCCTCATATATCCCAGACTTGGAGCTGAAGAAGCTGGCAACTCAGAAATACCAACAGGTACATTTTAAGAAAGCCCAACCAAAGTCCGCTCTCTTTAACCCAAAGAAAAAGAAGCAGTCTAGCAAGACAGAAAACTATCTGCTAAGAAACGCTCTACTCTGTCTTAGCTAAAGTACATAAAATAAAATTATGACCTCAATATTACTCATTCCAGCAAAGGCTGAGTGGGGAGCCTAGACTTTTACCCTCGCAAGGCTGTAATGAGGCGCTCAAAAACCCCAATTAGGTGGCCTGATAGGGTGTCGTGTAGAGAACTAGAGCGGTGATCCCCACCAATCATAAATGATGTCCACTAATAACTTCTCTTCCCATGTTGAGAGTAAAAACTATAATCCAATGGTAAACAAGTCACCTACACAATAGTATCAATTGCTGCAACCTACCAGTTTGGGAGCCAAAACCCCACCCTGTGGGTAGAAATGACGCTCTCCCCCCACTGCTGTGTTGATGGGGGTTAAGCGGGGAACAGGGACTTCTTGTGCTACCTGGCCTTCATACATCAATAGACATCATGATGACATCTCCCCCCTCCCCCTGCTGGGGTGGTGTCAGAGAAAGCCAGCTAAAACAGAGGGTTTAAATAAGATCCAGAGTCTCATAACGTAATAAAAACACGTAGGTTTTTAATTTAAAAAATCATTCATCCTACCAAGAACCAGGAAGATCTCAAGGAAAATGGATTGAAAAGACCATCAGTTGCCGACAACATGAAAACGGCAGTGATGTAGTATAATTTAAAGAGGTTTTAAAAGCAGCCATCATAAAAATACGTCAATGAGCAATTATGAACACACTTGAAGCAAATGGAAAAATAGAAAGCTCCAGCAAAGAAATAGAAAATCTCAGCAAAGAAATAGAAGATATAAAGAAGAACCAAATTGGAATCTTTGGAAATGAGAAATAAAATAAACTAAATTGAAAAGCTCAGTGGATGGGCTCAACAGCAGAATGGAGGGGAAACAAGGAAAGAATCAGTGAACTGGAAGATAGAATAATGGAAATTGCACCTAATCTTAACAATAGAAAGAAATTAGACTAAAAAAAAAAAAAAGAACAGCACCGAGCCCAAAGAATCTTACATTTATGTATTTAGAATACATGCTTGAAATAGCTGAAATTACAGAAATGCTAAAATTATCTGGCAAAGATTTTAAAGCAGCCCTGACAAGAATTTTAGAACTGAAAAAACAGAATAATACAAATAACAAAATAAAAAGCTCAGCGCATGATCTAGACAGTAGAAGGAAAAGGACAATGCAGGGAACTGAAGAACTAAAACAAAAAACAATAAAAATACACAATTTCAGTAAACTAGAAAATAGAATGAAGAAAATATACAATAGTCAGAGAAAGAAAAAAAAGAATAAAGAAAAAGACAACTTTGGAGTCATCTGTGACAATATAAAAAAATATCTAATATTTCTTACAATGGAGTACCAAAAAGAAAGAAGAAAAAGAGGGGGGGTTAAAAAAGTACTCAAAGAAATAATGGCTGAAAACTTCCCAAATTTGGCAAAAGACATAAACCTACAGATTCAAGAAGCTGAGTGAACCCCAAATAGGATAAACCCAAAGAAATCCACACCAAGACACATCATAATCAAACTTCTGAAAACTAAAGACAAAAATTTAAAAACAAGAAAAAAAGAAAACACCACTTACAGAGGAAAAACAATTAAAATGACAATAGATTTCTCATCAGAAACCATGGAGGCCAGAAGGAAGTGCCAAAATATTTTTCATGTTCTTAAAGAAAAAAAACTGCAACCCAAGAATCTTAAACCAAGAAAATTATCTTTCAGGAATAAGGGAGAAATCAAGACATTCTCAGATGAAGAAAAACTAAGAGAATTTGTCACCAGCAGACCTACCCTAAAAAAAAGGATGAATAAAGTTATTTGTATAAACAGAAAGGAAATGATTAAAGAAGGAACCTTGGGACATCGGAAAGAAAGACAACTGAAAAAAAATTATAAAAGAAGAAACCTTGGAACATCAGGAAAGAAGAAAGAACATGGTAAGCAAAAATATAGGTAAATACAATAGGCTTTCCTTCTTCTCTTGAGTTTTCTAAATTATGTTTGACAGTTGAAGCAAAATTTTTATACCATCTTGTGTTGTGCTTCTAAACGTATGTAGAGAAAAATAATTCAATCAAATATAGGGAAGGGAAAGGGGCTTAAGGGAAGGTAAGGTTTCTATACTTCACTTGAACTGGTAAAATGATAACACCAGTAGACTGTGATAAGTTATGTATATATAATATAATACCTAGAGTAACCACTATAAAAAACCGATACATAAATTAAAAATGCTATAGATAAATCAAAATGGAGGTCTTACAAATGTTCAAGTAAAACGCAGAAAGGAAAAAAAAAAAACAGAAACAAAACACAGAACAAACAGAAAACAAAAAATAAATAAATATAATTACATTAAATATAAATGGTCTAAATATAAAAACAATAAAAAGAAAAAGAAAAATAGAGAGTATAAAAAAAAACCAAAAAATATATTTTCTAAAAAAAACTCACTTCAAATATAATAATATAGGCAGGTTGAAAGTAAAAGAATGGAAAAAGATATATCATGCAAACATTAATCAAAAGAAAGCAGGAGTGGCTATATTAATATCAGATAAAGTAGACTTCAGAGCAAAGAAAATTACCAGAGACAGAGAGGGACATTATATAATGAAAAAAAGGTCAATTCACCAAGAAAACATAGCAATCCTAAATGTGTATGCACCAAACAACAGAGCTGCAAAATATGTGAAGCAAAAACTGATAGAACTGAAAGGAGAAATAGACAAATCCACAATTATAGTTGGAGACTTCAATACCCCTCTCTCAATAATTGATAGAACAACTAGAAAAATCAGCAAGGATATAGAAGAACTCAACAACACCATCAACCAACAGGATCTAATAAACATTTATAGAACACTCCACCCAACAACAGCAGAATACACATTCTTTTCAAGTGCCCATGGAACATATACCAAGATAGACCATATCCTGGGCCATAAAACAAACCTCAACAAATTTAAAAAAATTGAAATCATACAGAGTGTGTTCTCTAACCACAATGGAATCAAACTAGAAATCAATAACAGAAAGATAACAGGAAAATCTCCAAACACTTGGAAACTAAACAACACACTTCTAAATAATCCATGGGTCAAAAAAAAAATTCTAAAGATAAATAAAAAATAAATTAAACTAAATAAAAATAAAATACAAAATATTAAAATTTTGTGGGAAACAGTTAAAGCAGTGCTGAGAGGGAAATTTATAGCACTAAATGCATATATTAGAAAAGAAAAAAAGTCTCAAATCAATAATCTAAGCTCCCACCTCAAGAACCTAGAAAAAGAAAAGCAAAATAAACCCAAAGCAAGCAGAAGAAAGGAAATAATAAAAATAAGAAAAAAAAAAAAAAAAATAAAAATAAAAAAAAAAAAAAAAAAAATAAATAAAATAAAAAACTGGTTCTTTGAAAAGATCAATAAAATTGACAAACCTCTAGCAAGACTGACAAAGAAAAAAAAAGAAAAAACACAAATTACCAATATCAGGAATAAAACAGAGGATATCACTACAGACCCTGCAGACATCAAAAGAATAATAAAGGAATACTATGAACAATTCTACACACATAAATTTGACAACTTAGATGAAATGAACCACTTCCTTAAAAAACACAAACTACCACAATTCACCCAATATGAAATAGATAATTTGAATAGCCCTATAACTATTAAGGAAATTGAATTTAAAATTTTAAAACCCAATAAAAAAAAAAAACCACAAGGTCAAATGGATTTAATAAAAAAATTTTACCAAAAATTAAAAGAAAAATTAAAACCAATTCTACATAATTTTTTCCAGAAAATAGAAAAGAAAAAAAAATTTCCAAATTCATTTTATGAAGCTAGTATTACCCTGATACCAAAACCAAACAAAACAAGAAAAAAAAAAAAAAAAAAAAAAACAATATCCCTTATGAATATAGATACAAAAATCCTTAACAAAATATTAGCAAATAGAATTCAGCAATATATAAAAAAAAATATATAAACCAAGCCAAAGGGGTTTATTCCTAAAATAAAAAATTTAAAAATTAATCAAATTATAATAAATAATATTAGGATAAAGAAAAAAAATCACATATTTATAAAAACAGATAAAGAATTTAAAAAAATTCAAAACCCATTCATTATAAAAACTCTCAGAAAAATAAGAAAAAAATTTCTTAAACTTAAAAAAAACATATAAAAAAAACCTATAGCTAACATTATACTTAATGATGAAAGACTGAATGCTTTCCCCCTAAAACTAGGAAAAAAGCAAAGATGTCTACTCTCTCTTCTTTTTAACATAGTTATAGATGTTATTGCTAGCCAATTAAATAAAGAAAAAAAAGTAAAAAAAATACATATAAAAAAGAAAGAAATAAAAATGTCCCTATTTGCAGATGACATGATTGTCTATATAGAAAATCCCAAGAAAACAAAAAAAAAAAAAAAATCTAAAAAAAATAATCTAAAACTAATAATTGAGTTCAGCAAGGTTACAGGATACAAGATAAACATACAAAAATCATTTCTATATATAATAACAATAAACATATGGATTAAAAAATTTAAAATACAAAAAACATTAAAAAATATAATACTATTTATAATTATTAAAAAAATAAAATTTTTAGGTATAAATATAAAAAAATTTATAAAGAACTTTATTGCTAAAACTTATAAAATAATAATGAAAAAAAAATAAGATCTAAATAAATGGAGAGATATAATGTGTTCATGAATTAGAAAAATTAAAAAAGTAAAGATGTCAATTCTCCCCAAATTGATATACAGGTTTAACACAATTCCTATCAAAATCCCAGCAAGATTTTTTGTAGATATAGACAAGATTATTCTAAAATTTATATGGAAAAGCAAAGGAACTAGAATAGCTAAAACAAATTTGAAAAAGAAAAATAAAGTGGAAGGAATCAATCTACCCAATTTTAAAACTTAATTAGAAACTAAAATAAATCAAAATGGTTGGAATAGTGGGAGAGAAATAGAGACAAATAAATTAAACAAACAAAATAGAGAACCCAGAAATAGACCAAAAAAAATTGCCCAAATAATTTTTGACAAAGGTACAAAAGCAATTCAATGGAGAAAAGATAGCCTTTTTAACAAATGGTTCTTGAAACAATTGGACATCCATAGGCAAAAAATTAACCTCAACCTAAGTCTCACACCTTATATAAAAATTAATTCAAAATATAACATAGATTTAAATGTAAAATGTAAAACTTTAAAACTTTTAGAAAAAAAAATAAGAAAAAATTTTAGGAAAACTAGGATAGGCAAAGTGTTTCTAATTAACACCACAAAAACAAAACTCAAAATAGAAAAAATTAATAAATTAGACTTCATCAAAAATTTAAAATTTTTTTTTGTAAAAGACCCTGTTAAGAGGATGAAAAGACAAGCTATAGAATGGGAGAAAATATTTGCAAACCACATATCCAACAAAAGACTAATATCTAAAATATATAAAGAACTCTCAAAACTAAACAATAAAAAAAAAATAAATACAATTAAAGAAGAAAATAGGAAGAAAAAACAAAAAAGAATTTTAACAGAATTGATTGAAAAGATGGCAAATAAACACATGAAAAGATTTTAGAAAACCTTTATTAGCAATAGAGAAATAAAAATTAAAACCATAATGAGATATCATTACACACCTATCAGAATGGCTAAAATAAAAAATAGTGGCAAAAAGACAAAAGCTGGTAAAGATGTAGAGAAACTGGATCACTCATACTCCGTTGGTGGTAAGATTATAAAATGTTCCACCAACTCTGAAAAGCATTTTGATATTTTTTTAAAAAAAAAAAACATACAAACCATATATGACCCAAAAATTGTACTTCTGTGTATTTACCCCAGAGACATGAAATTTCACGTGCACGTAAATTCCTGTCAATTCATCTAGATAACTGAAAAATTATATACACACAAAAACTGGAACAGAAATGTTTATAGTAGCTTAGTAAATAATATCTATAACATGGTAAAAAGGAACGAAGTATTTATACAGGCTGAAACGTGAATAAATCTTCAGTGAATTTTTGTCAGTGAAAACTACCAAGCAATAAAAGTTAACAAACTCTTAATAACATTCTTGAAATGACAAAATTATAGAAATGGAGAACAGATTAGTGGTTGCCAGGGGTTAAGGAGGGGGTGGGGGTGGGAGGGAAGTGGGTGTGGCTATAAAAGGGCAACATGAGGGATCCTTGTGGTGATGGAAATGTTCTGTATCTTGACTGTATCAATGTCAGTATCCTGGTTGTGATATTGTACTATAGTTTTGCAAGATGTTACCATTGGGGGAAACTGGGTAAAGGGTACGTGGGATCTCTCTGTATTATTTCTTACAACTGCATGTGAATCTACAATTATCTCAAAATAAAAAGTTTAATTTAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MD1.ORF1.hs1_chimp.marg,L1MD1.ORF2.hs1_chimp.marg,1324,2190,2649,6416,6732,316
L1MB7,AGGTGGAGCAAGATGGTGAATAGAAGCCCACACTATTCATCCCCCAACAAGAACACCAAATGTTAACAAGTATCTTCACGCAGAAAAGCACCATCACAAAAACAAAAAATCAGATGAGCAATCACTGTACTTGGTTTTCACTTCATATCACTAGAAGAGGCATTAAAGATGGTAGGAAAGACCATCGTGAATCACCAACACCACCTGTCTCCATCTTCCAGTAGTGGCTACTCAGTGGAGAGAGTCAGTCTGTGTATGCAGAGGACAGAGAGCGCAGCAAATGGGGGACTTTACATAGAACTCAGTGCTGCCCTGTCACAGAGGAGAGCAAAGCCATGTTGGGCTCGGGCAGCACCCACATACAGAGGGAGCATGTGGACCAGACTTAGCCAGAGGGGAATTGCCTATCCCAGTGGTTGGAACTTGAGTCCCTTAGTAAGCCATGCCATTGCAGGTCAAAGTGCTCTGGGGTACTATGTAAACTTGAAAGACAGTCTAGGCCGGAGGGACTGTAATTCCTAGGCGACTTCTAGTGCCTGCCTGGACTTAGAGCCTGGGGACCAGGGTGAAACATGACTATGGAGACACTAGTTGGGTTAGCTAAGGGAGAGCTTGTGCCACCCCTCCTCCAACTCCAGGCAGTGTGACTCACAGCAACGAAAGTGACTCCTTTCTTCTGCTTAAGGAGAGGACATTGAAGTGTAAAGAGGATTATGTCTTGTATCTTGGATACCAGCTCAATCGCAGTAGCATAGAAAATCAAGTAGACTCATGAAGCCCCCATTCCAGGTCCCAGCTCCCAAACAACATTTCTAAACACAGCCTGGGCCAGAAGAGAACCCACTGCCCTGAATGGAAGAACCCGGTCCTGACAGGATTAATCACCTGCTGACTAAGGAGCCCTTGGGCCCTGAATAACTAGCAGTGATACTCAGATAGCATGTCATAGGCCTTGGGCTCTCATACATGGTCACTACGGGTATGACCTAGCACATTTCTGCCCATGGTGGCTGTGGTGAAAGACTCTTTCCATTTGAGAAGAGCAGAAGGAAATGTAAAGGGGTCTTTGTCTTACACCTTAGGTACCAGCTCAGCCACAGTAAGGTAGAGCAGCAACAAGAAGGTGCTTGGGGTCCCTGAGTTCAAGCCTGAGCCATTAGACAGAAATTTTGGATGTTCCCTGGGTAGAGGAGAGCCCCTTGCTCTAAACTATGAGTTCCAGGCCTGGCAGCAATCACGAGCAAATCATAAGCTGACTAAAGAGCCTTAGGGCTTTAAGTGAACATTTGTTGTAGCCTGGCAGAACCCTTCTTCAAAGGAAAAAGGAATCAGCAGAAATGATCATTATTTGACATGACTCAAATATTACTGAATAGAAAAAAACTTTTTCCAATGGGCATTTATTGAAAAAAATTAGAAACAATTACTAAACATCATGGATATACCAAATAGTAGAAAACTGTTGGGCAACCAATGAGAAAACAACCGAACTTAAAACTAAAAGGTGAGGGGAAAATATCCACAAGGAGATTTTGAAAACTATAAAATATTTCTAGAAAACTACATGCATAGGATTGTATGTACACTCAAGACTATGTGCATGCTAAGAAAAGACATAAAAAGGCCCTGAGCTCTCAATCCTGACAAACCTTGAGATTCTGAACAAACAGGAAGTGAAGATTAAAGAAGAAATGTAAAATGTCTGACTAAGTGTTGAAGACATGCACAGACATCAACAGTAAGTTACATAGCAAACGCTATGAGACAAATTAAAAAAAAAATAATAAGAAACTTTGTTTAATAATTAGAAGACCACTTTGGTATCTAATCAAAGACCTCTATGGCGGTACCTTAACAAGCCATAAAAATTACAAATAACATCAAGAAGAAAATAAAAGAACAACAATAAATCCAGAAATAGGTTTTGAGGATGATGATCAAAAATACGACAGTATGTATGTAACATTACAACTACTCAACTATCCAGTTTCAAGATATTAAAAAAAACATAAAGAAAATAATATAAACAGGAAATATACAAACTAATAGAATAGATCAGAGTGGAAGCTCAGAAATGGATCTTAAAGACTAGGACTTAAAGAATCTCTGATAAATAAGTGAAAAGAACTAAAAAGAGATAAATAAAAATATTTTAAGAAAACAAAGAGAATAAAAGAATATTTTTTCATGAAATATTAACTATAATAAAAAAACAATAAAAAGAAACAAAACACAAATACTAGAGCTGAAGATCATAAGGACTAGGCCAGAATTTTCAACAGAATTCCTTAATAGCAGAAAAAATCATGCAGAAAGAAGAAAGATCGCCATTGAATATAAGCCATTTGCAACTACCTAGTCAAAAGAGAAAAAAAAATAAAAAAAAAAGAAAAAACACCAGAAACATCAAATTCTGGATTTGAAATATACAATAATTGAAATTAAAACTTCACTAGAGGGGCTCAACAGCAGATTTGAAATAGCAGAAGAAAGAATTAGCAAACTTGAAGATAGGTCAATAGAGATTATCCAATCTGAAGAGCAGAAAGAAAAAAGAATGAAGAAAAATGAACAGAGCCTCAGAGACCTGTGGGAAACCATCAAGTATACCAACATATTCATAATGAGAATCCCAGAAGGAGAGGAGAGAAAAAAAGGGAAGGAAAGAATATTTGAAGAAATAATGGCCGAAAATTTCCCAAATTTGATGAAAAACATTAATCTACACATTTCAAAGAAGATACATGAATTCATAACAAAGAGATCCACACCTAGACACATCATAATCCAATTGTCAAAAGACAAAGAAAAAATTTTTAAAAGCGGCAAAAGAAAAAGAACTATTACTTACAAAGAATCATTAATAAAATTAACAGTTGATTTCTCATCAGAAACCATGGAGGCCAGAAGGCAGTGGGATGACATATTCAAAGTGCTGAAAGAAAAAAAAAATCAACCAAGAATTCTATATCCAGCAAAACTATCCTTCAAAAATGAAGGAGAAATTAAGACATTCCCAGATAAACAAAAACTGAGAGAATTTGTTGCTAGAAGACCTGCCTTACAAGAAATACTAAAGGGAGTTTTTCAGGCTGAAGGAAAAGGCGGATAGTATGTCCAAATTAAAGAAGTACAAAAGCTAAAACTGAAAACAAAATAAATAGTATTCCTAATCATCAAAATTTAAAAATGAATGATTAAAAGACAACCAAAAATAACAAATAGTATTAAACTTCATCAGATCGGAATAAAAAGACATAGGAAAAGTAATTGAGGAGGCTGGAATGAAAAAACATTAACTGTAAAGGGGAACAAAATTACAAGGTAAAAGAACCCTTGAAATAGTAAATAGAAAGTAAATTATAAAAGTCTAAATATTTTTTTTTATTTTCTTTCTACTCTTATCTAAAAAATAAAGGACAACAGAATAAAAATAATTGAAAGATTATTGTCTTAACTTTTTAAAACGTGTAATTTGTGTGAAAAAACAGACAAAGAAAGGGTGGGGAGATGAGATTTTATTGAACAAAGTTTTTGTATACTGTTGAAATTAAGTTGGTATTAACTTGAACTAGATTGTTTTAAGTTAAGGTGATTATTACATCCCCTGGAAAACCCATGAAAAAATCAAAGCAAAATAATAAAAAAAAAGAAAAATAATAAACTATAAGATAAAAAATCCAAACTAAACAAAAGAGAAATTAGTTGATAAAAAAAAGAAGAAAAAAAGAAGAAAAATATATAACAAAAAAATTTATAATAAATATTAAATGGATAAAATCTCCATTAAAAGACAAAGATATATAAAAAATGATATTGGAAGGTAAAAAATACATGATCTAACTATATGCTGTCTACAAGAGACACACTTTAGATTTAAAGACACAAATAGGTTGAAAGTAAAAGGATGGAAAAAAATATACCATGCAAATAGTAACCAAAAGAGAAGGAGAGTGTGTATACTAATAATAGACAAAATAGACTTTAAGAAAAAAATTTTTACAAGAAAAAAAGAAGTATATTATATAATGATAAAAGGGTCAATCCATCAAGAAGATATAACAATTATAAACATATATGTACCTAACAACAGAGCCCCAAAATATATGAAAAAAAAAATGACAGAATTAAAGGAAGAAATAGACAATTAAAAAATAATAGTTGGAGACTTCAATACTTCACTATCAATAATAGATAGAACAACTAGACAAAAGATCAACAAGGAAATAATTGAACAACACTATAAACCAACTAGACCTAACAGATATCTATAGAACACTCCACCCAACATTTTCAACTGCACATATAGGAACATTCTCAGGATAGAACATATATTAGGCCATAAAACAAGTCTCAATAAATTTAAAAAGATTGAAATCATACAAAATATGTTCTCTAATCACAATGGAATGAAATTAGAAATCAATAACAGAAGGAAAATTTGGAAATTTAAAAAAAATTTGAAAATTAAAAAAAAAATTCTAAAAAACAACAAAGGGTAAAAAAAGAAATTAAAAGGGAAATTAGAAAATACTTTGAGATAAATGAAAATAAAAACACAACATACCAAAATTTATGGGATGCAGCTAAAGCAGTGCTTAGAGGGAAATTTATAGCTGTAAATGCCTACATTAAAAAAAAAAAAATCTCAAATCAATAACCTAACCTTCCACCTTAAGAAACTAGAAAAAGAAAAAAAAATACCCAAAACAAGCAGAAAGAAGGAAATAATAAAGATTAGAAGAGAAATAAATGAAATAGAGAATAGAAAAGAAAAAATAAAAAAAACAAAAAGTTGTTTTTTTGAAAAGATCAACAAAATTGACAAACCTTTAGCTAGATTGACCAAGAAAAAAAGAGAAAAAATTCAAATTACTAAAATCAGGAATGAAAGAGGGGACATTACTACTAACCTTACAGAAATAAAAAGAATTATAAAGGAATACTATAAACAATTGTATGCCAACAAATTAGATAACCTAGATGAAATGGACAAATTCCTAGAAAGACACAAACTACCAAAACTGACTCAAGAAGAAATAGAAAATCTGAATAGACCTATAACAAATAAAGAAATTGAATTAGTAAATAAAAAACTTCCCACAAAGAAAACCCTAGGCCTGGATGGCTTCACTGGTGAATTCTACCAAATATTTAAAGAAGAATTAAAACCAATCCTTCACAAACTCTTCCAAAAAATAGAAAAGAAAAGAACACTTTCCAACTCATTCTATGAGGCCAGTATTACCATACCAAAACAAGACAAAAAAATAACAAAAAAAGAAAACTATAGACCAATATCCCTTATGAATATAGATGCAAAAATCCTCAACAAAATACTAACAAAACAAATCCAACAACATATAAAAAGGATTATATACCATGACCAAGTGGGATTTATCTCAGAGATATAAGAGTTGTTTAACATTAAAAAATCAATAAATGTAATACACCATATTAATAGAATAAAGGACAAAAACCACATGATCATCTCAATAGATGCAGAAAAAACATTTGACAAAATCCAACACCCTTTCATGATAAAAACACTCAACAAACTAGGAATAGAAGGGAACTTCCTCAACCTGATAAAGGACATCTATGAAAAACCCACAGCTAACATCATACTTAATGGTGAAAGACTGAAAGCTTTTCTCCTAAGATTAGGAACAAGACAAAGATATCCATTTTTACCACTTCTATTCAACATTGTACTGGAGGTTCTAGCCAGGGCAATTAGGCAAGAAAAAGAAATAAAAGGCATCCAGATTGGAAAGGAAGAAGTAAAACTATCTCTATTTGCAGATGACATGATCTTATATATAGAAAATCCTGAAAAAAAAAAAAAAAAAATATTAAAGCTAATAAATAAATTCAGCAAGGTTAAAGAATACAAAATCAATATAAAAAAACATTTGTATTTCTATACACTAGCAATGAATAATCCAAAAATGAAATTTAGAAAAATTTCTATTTACAATAGCATTAAAAAGAATAAAATAAAAAGAAATTTAACAAAAGAAGTGAAAGACTTGTACACTGAAAACTACAAAACATTGTTGAAAGAAATTAAAGAAGACCTAAATAAATGGAAAAACATCCATGTTCATAGAATTAAAAAATTAATTTTTTTAAGAAGGGAAATATTTCCCAAATTGATCTACAGATTCAATGCAATCCCTATCAAAATCCCAGCTTGCTTTTTTGCAGAAATTGACAAGCTGATCCTAAAATTCATATGGAAATGCAAGGGACCCAGAATAGCCAAAACAATTTTGAAAAAGAAGAACAAAGTTGGAGGACTCACACTTCCCAATTTCAAAATTTACTACAAAGCTACAGTAATCAAGACAGTGTGGTACTGGCATAAGAGACAAATAGATCAATATAATAGAATTAAAAATCCAAAAATAAAACCATAAATTTATGGTCAAATTAATTTTAACAAAAGGGTCCAAAGACAATTTAATGAGGAAAGAATAGTCTTTTCAAAAAATGGTGCTGATATCCACATGCAAAAAAATCAACACGCAAAAAAATAAATTTGGACCTTCACCTCAAACCAAAAACAAAAAATTAATCAAAAATGGATCATAGACCTAAATGTAAGAGCTAAAATTATAAAACTCTTAGAAGAAAACATAGGAATAAATCTTTGTGACCTTGGATTAGGCAATGGTTTCTTAGATATGACACCAAAAGCACAAGAAACAAAAAAAAAAATAGATAAATTGGACTTCATCAAAATTAAAAATTTTTTTGTTTCAAAAAACACCAATAAAAAAAAGAAAAAAAAAACCTAAAAAATGAGAGAAAAAATATTTACAAATCATATATCTGATAAAGGTCTAGTATCCAGAATATATAAAGAATTCTTACAACTCAATAATAAAAGGGATAAAGATTTGAAAAAAAGGCCAAAAGTTTTAAATGGAAGACATTTCTCCAAAGAAGATATACAAATGGCCAATAAGCACATGAAAAGATGCTCAACATCATTAGTCATTAGGGAAATGCAAATCAAAACCACAATGAGATACCACTTCACACCCACTAGGATGGCTATAATAAAAAAAACAATAATAAATGTTAGTAAAAATGTGGAGAAATTGAAACCCTCATACATTGCTGGTGGAAATGTAAAATGGTATAACTTTTTGGGAAAACAGTTTGGTAGTTTCCTAAAAATGTTAAACATAAAGTTACCATATGACCCAGCAATTCCACTCCTAGGTATATACCCAAGAGAATATGTTCACACAAAAACTTGTACAATAAATGTTCAAAGAAGCATTATTCTTAATATAAAAAAAGAGAAAAAACCCAAATGCCCAACAACTGATGAATAGATAAACAAAATGTGGTATATCTATACAATGAAATGTCCAGAATAGGCAAATCCATAGAGACAGAAAGTAGATTAGTGGTTGCCAGGGGCTGGGAGGGGGGAATGGGGAGTGACTGCTAATGGGTACGGGGTTTCTTTTTGGGGTGATGAAAATGTTCTGGAATTAGATAGTGGTGATGGTTGCACAACTCTGTGAATATACTAAAAACCACTGAATTGCACACTTTAAAATGGTGAATTTTATGGTATGTGAATTATATCTCAATAAAGCTGTTATTT,ORF1 and ORF2 replaced with MACSE reconstructions,L1MB7.ORF1.hs3_orang.marg,L1MB7.ORF2.hs3_orang.pars,2408,3097,3752,7376,7627,251
L1MC3,AAAGAAATAATGGCTGAGAACATTTCCAAAATAAATGACAGAAACCAAACCACAGATCCAAGAAGCTCAGAGTGCAGCTCCTTGCCAGCAACAGAGCAAAGCAGCAATAAAAACAACTTTGACAAGTTAACAAAAGATCTACACTAAGGATAAAAATATTCCAACTGAAAGACTAAAGACAGGACCCATTGCAAAGAAGCTAAAAACCTTGAAAAAAGATTAGATGAATGGCTAACTAGAATAACCAGTGTAGAGAAGTCCTTAAATGACCTGATGGAACTGAAAACCATAGCACGAGAACTACGTGACGAATGCACTAGCTTCAGTAGCCAATTTGATCAAGTGGAAGAAAGGGTATCAGTGATTGAAGATCATGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAAGAGTAAAAAGAAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACAAAATCTACGTCTGATTGGTGTACGTGAAAGTGACATAGAAAATAATAATGGAATGAAAAAAATATTTGAAAAAATTATGGCTGAAGAATTTTCAAAAATAAATAAAAAAAACAAAACTCAAATTCAGGAAACTCAGAGAACACCAAGCAGGATAAATACCAAAATATCTACACCTAGGCACATCATATTCAAACTGGGAGGAAAAAAAACGAAAAACAAAAATTTTTTAAAAGACGCCAGAAGAAAAAAACTTACCTATAGAGGAAAAAAAATAAGAATTACAGTGGACTTCTCATCAGAAACCATCAAAAAAAAAAGAGAATGTAAAAATGTATTCAAATGTTTAAAGAAAAATTATAATCAACAAAAAATTCTATATCCAGCAAAATTATACTTCAAAAGTAAAGGAGAAATAAAGACTTTCTTAGACAAACAAAAACTGAGAGAGTTTATCACCAGCAGAACTGCTTTACAAGAAATGTTAAAAGAGGCTTTTAAAAACAAATCTATGAATTCTTACCAGCTACTAAAAGATAATGCCAAAGCTAAAAGTAGTTCTTCAGGCAGAAAATTAATCAAGGAAAGGAAAGTTATATAGGTCAGAAACTCAAATCTACTTAAATAATGGAAGAATGTTAAGTGTTTTCTTATTCTGAATTGATAACTGTTTGCTAAATATAATAGTAATAATTATGTGATTATAAATTATAAATAATAGAAAAGAAAAAAAGAAAAATAATAAAAAAAATGAAAATGAAAAATAGAAAATACAATTATAAAAAAACCTCACTTCCATGTGAACTATATGAGTGTTGTTAGAGGTAGTTTTTATTGTATTTAAAGTTGTATAATATTAAAAGTAGCACCACAATCATTTATATAACTAAAAAAATATAATTGATATGCTAAGAAAAAAAATAAAATGGAATAACATAAAATGCTCAAGTAAAAGTAGAGAAGGCAGAAAAAGAGAGGAAAAAAAAAAAAGAAAAGAAAAAGTTCAAAAAATAGAAAACATTGAAAACATGGCATATATTAATCCAACTATATCAATAATCACTTCAAATGTGAATGGTCTAAATTTATCAATTAAAGGCAACAGTTATAGGTGTGAATAAAAAACAAGCCAAAAATAAAAAACAAACAGACAAAAAGGTAAATGGTGTACAAGAAACCTAACTGATTGGTGGTTACAAACAAACTTTCATAATATAAAGATGTTGGAGAAATTGGGAATACTCTGTTATATGGTCTCTATACTATATTTGAAGTAGTACAGTGTTATTTGAAAGTGGGCTTAGATTATTTTATGTGTATATGAATATACATTTCTATATATAATAGTATGTTTATATTATATATAATAGTGTATTTTATTTTATTTTAATATATATTTTTGAAAGAAATATAATTTATATACTAATACGCACATATAAAATAAGCCCTAAAGCAGTGGCTAAGAGCATTTACAAAAGAAAAATAGGTAAATGGAATAGAATAGAGATGAAAGAAGTATCCAAATACAAAATTAAACAGTTAAAGGGCAAAAAAACAGAGAAAAAAAACAAAAGAAACAAAAAAGAAAAAACAATAGAGAATATTATACTTAGGAAAGCAGAAAATCAGTTACAAAACATGGTAAATATTAATACAAATATATTAATAATCACTATAAATTTGAATGGTCTAAATACCACAATTAAAGATAAAACTCTACAGAATAGACATAAAGAAAACATTCAACTAAAAATGATGTTTTGTCTACAAAAAATCTATTTTAAAATCAAAAATAAAAAAAGGGTAAAAATAAAGAGATGGAGAAAGATATACCATGTTAACACTAATCAAAAGAAAGCTGGAGTAGCTATATTAATTTCAGACAAAACAGATTTCAAAACAAAGAAAATTATCAGAAAAAAAAAAGGACATTAAATAATGATAAAAGGGACAATACAACAAGAAGACATAACAATTTTTAATATATATGTACCAATCAACAAAATATAAAAATACATGAGGCAAAAAATAATAGACATAAAAAAAGAAATAAACAAAAACACAATTATAATTGGAAACTTCAATAAACCTTTGACATTAATTGAAAAATCAAAAAAACAAAAAATCAATAAAAATATAGATGACCTGAACAGAACTATCAATCAAATTGATCTAAATGAAATTTATAAAATACTCCATACAAAAACAGCAGAATACACATTCTTCTGAAGATTCCATGAAACATTCAACAAAATAGAAAATATTCTAGGCCATAAAACAAACATCAATAAATTTAAAAAAATAAAAATAATACAAAATACTTAGACAAAACACAAAAGAATTAAACTAGAAATCAATAACAGAAAGATAGCTGGAAAATTCCCAAATAATTGGAAACTAAAGAACAAATTTCTAATAAACAAAAAATAGAAAAAAGAAAAAGTCAAAAGAGAAATTAAAAAATATTTTGAACTAAATGAAAATAAAAATATAACATATAAAAAAATATGGAATAAAAAAATTAAAACAAAAATCAATAAAATAAAAAAAAGAAAAAAAATAAAAAAAATAAAAAAAACCAAAAGGTTGTTTTTTGAAAAGATCAATAAAATTGATAAACCTCTAGCTAGGCTAACCAAGAAAAAAAAAAAGAAAAAACAAAAAACGAAAATAAAAAATGAAAAAGAGGTCATCACTATTGATCCCATGGAAATCAAAAAGATAATAAAAGAATACAATAAAATTAAAACTATGAAAAACTATTAAAAACTCTGTGCACATAAACTTGATAACTTAGATGAAATGAATCAATTTCTTGAAAAACACAAACTTCCAAAATTCACACAAGAAGAAATAGATAACCTGAATAGGCCTATATCTATTAAAGAAATTAAAATAATAATAAATAAACTTCCAAAAAAAAAAGCACCCGGACCAAATGGTTTTACAGATAAATTTTACAAAAAATTTAAGAAAAAAATAATACCAATTTTCCAAAATCTTTTCAAAAAAATAGAAACAAAAAGAATACTAACTAAATCATTTTAAGAAACCAATATTAACCATATACAAAAACACACTACAACTATCATAACACTAAAGATCAAAAGACATTTAAAGAAAAAAAATATACAAAAAAAAAATTATAAACAATAAAAACTAATAAAAATAGATGAAAAAATTCTCAACAAAATATTAACAAATCAAATCCAAAAAATTATAAAAAAAATTATACATCATAACCAAGTGGGATTTATTCCAGGAATGAAAGGCTGGTTTAAAATTTAAAAATCAATCAATGTAATCCACTATATCAACAGACTAAAGAAGAAAAATCATATGATCATATCAATTGATGCAGAAAAATTTAACAAAATTCAAAATCCATTTATGAAAAATCTTAGCAAAATAGGAATAAAAGAGAATTTTCTCAACTTTATAAAGAAAATCTACAAAAAACATCCAGTTAATATCATATTAAATGGTGAGAAACTGGATGCTTTTCCCTTAAGATTAAGAACAAGGCAAGGATGTCCTCTCTCACCACTCCTATTCAACATTATACTGGAAGTCCTAGCTAGTGCAATAAGACAAGAAAAAGAAAAAAAATGTATACAAATTGAAAAAAAAAAAATAAAACTGTCTTTATTTACAGATGACATGATTGTCTATGTAGAAAATCCCAAAGAATTTACAAAAAAAATTCTAAAACTAATAAGTAATTATAACAAGGTCATAGGATACAAGGTTAATATAAAAAAATTAATTTCTTTCATATATACAAGCAATAAAAAATTGAAATATAAATATAAAACAATAAAAATTAAAATAAAAAAAATAGAAATAAAAATAAAAAAATATATACAAAATATATATATAGAAAACTATAAAACAATGATAAAAGAAATAAAAGAAAATCTAAATAAATGGAAAGATATTCTATGTTCATGGATTGGAAGACTCAATATTGTTAAGATGTCAATTCTTCCCAACTTGATCTATAGATTCAATACAATCCCAATCAAAATCCCAGCAAGCTATTTTTTAGATATTAAAAAAATTATTCTAAAATTTTTATTGAAAAGAAAAAGACCTAGAATAGCCAACACAATACTGAAAAAAAAAAAAGTTGGAAGACTCACAATACCTAATTTCAAAACTTATTATAAAACTATAATAATCAAGATAGTGTGGTATTAAAAAAAAAATAAACACATAAATAAAAACAAAATAGAGAGCCCAGAAATAGACCCACACAAATATAGTAAACTGATTTTTGAAAAAGGAAAAAAGCAATTCAAAAGAAAAAAGAATATTTTTTTAAAAAAATGTGCTTGAAAAAATTGGATATCCATATGCAAAAAAATAAAAATAGAAAAAAAACTTATACCTTTCACAAAAATTAACTCAAAATGGATCATAGACCTAAATGTAAAATGCAAAACTATAAAACTTTTAAAAGAAAACATAGAAAAAAATCTATGTGACCTTGGGTTTGGTGATGAGTTTTTAGATACAACACCAAAAACAAAAATCATTAAAAAAAAAATTGATAAATTGGACTTTATTAAAATTAAAAACTTCTGCTCTGTAAAAGACACTGTTAAGAGAATGAAAAGACAAGCCACAGACTGGGAAAAAATATTTGCAAAACACATATCTAATAAAGGACTTATAAAAAAAATATATAAAAAATTTTTAAAAAAAATAAAAATAAAAAAAAAAAAAAAAAAAATAAAAAAATGGGCAAAAAATCTGAACAGACAACTCACCAAAGAAGATATGGCAAATAAGCATATGAAAAGATGCTCAACATCATTTGTCATTAGGGAAATGCAAATTAAAACAACAATGAGATACCACTACATACCTATTAGAATGGCAAAAATGAAAAAAATGCTGACAAGGATGGAGAGCAACAGGAACTCTCATTCATTGCTGGTGGGAATGCAAAATAGTACAGCCACTTTGGAAGACAGTTTGTGACAGTTTCTTACAAAGCTAAATATAGTCTTACCATATGATCCAGCAATTATACTCCTAGGTATTTACCCAACTGATTTGAAAACTTATTTCCACAACAAAAACCTGCATACAAATGTTTATAGCAGCTTTATTCATAATTACCAAAAACTGGAAACAACCAAAATGTCCTTTAATAAGATAAGTGAATGGATAAAAAAAATATGGTACATCCATACAATGGAATATTATTCAGTGATAAAAAGAAATGAAATATCAAAACATAAAAAGGCATGGATAAATGCAAATGGAAAATGCCAAACTAAAGAAACTATTTTGAAAAGGAGGGAAATGATGTATAATAACATATTAACGAGTGAACACTGTTGGAATGGGGAATGTCACACACTGGGGCCTGTTGTGGGGTGGGTGGAGGGGGGAGGGATAGCCTTAGGAGATATACCTAATGTTAAATGACGAGTTACTGGGTGCAGCACACCAACATGAATGAATTATACATTTGTAACGTAACCTGCACATTGTGCACATGTACCCTAAAATTTAAAGTATTAAATAAACACATATTCAAGCTGTTTATAGCAGTTTTATTTATAACCTCCAAAAACTGGAACCCACCAAGATGTCTTTCAACAGATCAATTAAGGAAGAAATTGATATATCCATGCAATGAACTGTTATTAGCAATAAAAAGAAATGGAATATCTTACCATGAAAGAACATGGATAAATCTTAAATGCACATTTCTTAGTGAAATGACATTCTGGAAAAGGCAAAACTATAGAGACGGTAAAAAGATCAGTGGTTGCCAGGGGTTTGGGGGGGGGGAGGGGAGGGTTGAATAGGTGAAGCACAGGGGTTTTTTAGGGTGGTGAAACTATTCTGTATGATACTGTAATGGTGGATACATGACACTACATTTGTCAAAACCCATAGAACTTTACAGCACAAAGAGTGAACCTTAATGTATGCAAATTAAAAAAATCATTTAGGAGGTCGGGGGATCCCAGGATGGAATGCAGAATGTGACAAAACAATCTAACTGTATTACAAATGTATGAAACAACCTCACTGAAGGGGGTGGGGGAAAAGGTGCTGACCTAAGTAACTTTGGAAATGAGTGGAGTCTGTAAGACTAAAGGCAAAAGGAACTGTACATAAGCACTGTACTCTAGTTGATAAAGTTGTTTCCCATGGGGGTATGGGTTAACAATTCTGAAACCACTATACATGTATACTGGAATTGAACAATTAAGTAAATGGATGGCAGATGGTGGGAGCCAGGTTTCTCACTGTTGGAGTGGGAGGTTACAGATAAGCAAGGGGAGGAGGCTAGAATGATCCATGTGGTAATGGATTAGAGTTGGAGACATCAGTATGAACTCATGTTTAGCTTAATATAGATACAGATGGTTACATATAGAAATATTTATAGATATGTGTATATACATGGGTTAGTATACACACATATATTTCCTTGCTCTGTCAGCTGAGAGGGCCTAGAAGCAATGACACCCCAGTAGCAATGAGCACACCTAGTGCCCAGATCTTGGTTTCAATACCATTCTCCAATAAAAGGAACCAGGGCTCCTTGGAGAAATGCTGATTCTAGGACTGGGGCAGGAAATATACAAGATGAGCCTGGAGCATCTTGTAGTGCCAGAAAGTAAGGAAGTGCTCAAAAAAAAAACAAAAACAAACACAAAACCCCACAATGATGGGGGTATGTCAAAGGGACACAGGAGCCAACTGAAAGAGCTCCCAATGGCCAAAGCTGGAACAATTTGAAAATAAAGTAGTATTGGATTATAACCCAAAGTATAAATAAATATCCATGAGTCCATACTGATAAATAAATGATTGAATAAATTAAATGGGGGAGAAGAGACAAATCCCATGCAGAAGAATCCAAATAATTTATGTAGATACTCCACCCTCAAGGAGGGGGTAACTCCCCACTCCTTAAGTGTGGGCTGTACATAGTGACTTCCTTCCAAAGAGTACAGTATGGGAAGGGGGGGAAAGAGTAACTTTACAGTGAGAAACCTGACAAACACTACCTCAGCCAGTGATCAAGGTCAACATCAACAGTGATAAGTCATGTTGATAGTATGTACCCTTGATATGATGTGATGAAAATGGCACTTTACCTCTGTGGTCTTCCTCCAAAACCCATAACCCCAGTCTAATCATGAGAAAAACATCAGACAAATCCCAATTGAGGGACATTCTACAAAATACCTGACCAGTACTCCTCAAAACTGTCAAGGTCATCAAAAACAAGGAAAGTCTGAGAAACTGTCACAGCCAAGAGGAGCCTAAGGAGACATGACGACTAAATGTAATGTGGTATCCTGGATGGGATCCTGGAACAAAAAGGACATTAGGTAAAAACTAAGGAAATCTGAATAAAGTATGGACTTTAGTTAATAATAATGTATCAATATTGGTTCATTAATTGTAACAAATGTACCACTAATGTAAGATGTTAATAATAGGGGAAACTGGGTGTGGGGTATATGGGAACTCTGTACTATCTTTACAAATTTTCTGTAAATCTAAAACTGTTCTAAAATAAAAAGTTTTTTTAAAA,ORF1 MACSE reconst added to beginning,L1MC3.ORF1.hs3_orang.marg,L1MC3.ORF2.hs0_human.marg,0,1035,1677,6196,8034,1838
L1MC4,GACTTCTGGGTTTGGAGAACAATGGTGGTGGCCTGATTCCAAATCTCCCCCTCATCCTTCCCAAACAACCATAAAATCAACCATGCGCTCCACGCCCTCAGCATCACTGAAGACAGAGAATACCACAACCTTCAAATTATATGTAAGTAGAAAAGAGTTCCCACAGCCCACCTACCACCACTGCAAGCCTGTGGGTACAGAGAATGGGAGAGGAGAGGCTGAGCAGAGGACAGAGAAGAAGAACCGAAGATACAGACAAAATCACTCCCAGAAGTGGAACAATAAAAGCCAAAATACTAAGCACAGGTTGGAACTTGATAGTCCACAGCCCTGACAAGGGGGTGAAGAAGTAGCAGCCTCAGAGAAGCAGTGTTGGAGAATCAGATACGGAGAGAAGAGGTGGTCTCCCCTGGAGACATGGCAGTGAAGGGAAAGAAGGAAATGAGAGGGGAAAATTAAGGAACCAGCAGAAACAAAACAGAAGCAAGATATACCAACCCTCCCCCCTCCCACCCAACCCCACCACCATCCATAAAGAAACTGCACGGAAGAGGGCACTCTCAAACTAGGAACCCTGTCCACGAAATGAATAGGAATAGATAAAACAGACCATATCCATACTACTGCAAAATGTCAGAAAACGTGAATAAAATCTTTTCTGCTGATGAAAAGTCTCCCCCACAAACAACAAACATGAAGAAAGAAAACTGTAACACAATACTCCAAACTGAACTAAATATTCTCAAACAAGCATTTAGGGATATGAAAAATAAAAACCTAAGAACAGAAATGGACAAGAAAAAAACAAGCAAAACAAACAAAGGAAGAAATGAAATGAGTTGACTAAAGTTAGAGAGAAAGAAAAAGACAAAATTATATCAGAAATGAAGACTAAATTACAAGGTGCCCAAGGAAGAACAGATTGAAATGAAAACTTAATAAAGAACATTGAAGAAAAATCAGAAAAACAACAAAGAGAATGAAAATGAGATAAAGAAGTAAAATGGGTCAGAAAGAAAATAGTTGAAATGGAAGACAGGAAAGGAGGTCCAACATAAATGATGTCCTTGAAGAAGAAAAATCAAAACAATGAAACAGAATATTATTTAAAATTATAATCCAAGAAAATGGGGAAAAAACAGAGCAGAAAAACCGGAAACTCTAAAAAGCAGAGCGCCTCTCCTCCTCCAAAGGAATGCAGCTCCTCACTCAGCAACGGAACAAAGCTGGACGGAGAATGACTTTGACGAGTTGAGAGAAGAAGACTTCAGACGATGGGTATCAAACTACTCCGAGCTACAGGAGGAAATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTCATTAGACGAATGTATAACTGGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGACGGAGCTGAAAAACGCCAAGGCTCGAGAACTACATGAAGAACGCAGAAGCCTCAAGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGACAAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGATGGATAAAAAGAAACAAAATACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTAGTGTACCTGAAAGTGACAGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGGCACATAATTGTCAGATTCAGCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCAGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAAAAATAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCTCCAGACCTGCCCTAAAAGAGCTCCTGAAGGAAGCTCTTAACATGGATAGGAACAACTGGTACCAGCCACTGCAAAATCATGCCAAATTGCAAGTTTCGAAGCCACAGAAAAACAGTTTTGAATGTGCCAAACTCAGGGAACACTGTGCACTTGTGACTCTCCTTAGGAATCTACTAGAGGAGGTTAAGCTTCATCCAACCAAAAAAAAGATAACTGGGAAAACTGTGCAAAAGGACTGATGGTGAACATTTAAAATATTTAATTGTAGAGCTAAGATTAAAACAAGGGTGGGGTAATGGACTGAAGAGTAATATAAATATTACGTGTTCTGACAAAGGAGAACAACATATAACTAAAAATGGAAAGAAAAGGAAAAAAAGGGGAAAGTAGAATAAGATCATTGGTTGTTATAAATGGAATAGATAGTTGTCAAAGGATATCATTTAAAACTGACAAAACAGATAGTAAAAGGTTAAGTAAGAAAAAAGGGGTTTATAGGTGCACTATAAAAAGTATTAACGCAAAAGTAACCACTAGAATAAAAATACAAACCTTCTTAAATGAAAAAGAATTTTAAAAAGAAAAAAGAAGAAACACCACATAAAGAAAACCGTAAATATAATGCATTCAGTAATTACACCCTAAAATAATATGACAGAATTGAGACCAAACACAAAACTAATGGGCAAAATACCCAGCTCGCATCATAATATGACAGGATCAAATTCACACATATCAATATTAACATTAAATGTAAATGGACTAAATGCTCCAATTAAAATAACAAGATTGGCAAATTGGATAAAAAGTCAAGACCCAACAATATGCTGTCTTCAGGAGACTCATCTTACATACAAAGACACACATAGGCTGAAAGTAAAAGGATGGGAAAAGATATTCCATGCAAATAGAAAAAAAAAGAAATGGAGATGTTGCGCTATACTAATATCAGATAAAATAGACTTTAAAACAAAAAAAGTGAAAAGAGACAAAGAGGAACATTATATAATGATAAAAGGATCAATTCATCAAGAAGATATAACAATCATAAATATATATGCACCCAACAATAGAGCACCCAAATATATGAAGCAAATATTGATAGATCTAAAGAGAGAAATAGACAACAACACAATAATAGTAGGAGACTTCAATACTCCACTTTCAGCAATTGAAAAATCATCCAGGCAGAAAGTCAATAAGGAAACAGTAGAATTAAACAATACTATGAACCAAATAGACCTAATAGACATATACAGAACATTCCATCCAATAACAGCAGAATACACATTCTTTTCAAGCACACATGGAACATTATCCAAGATAGATCATATACTAGGTCATAAAACAATTCTCAATAAATTTAAAAAAATAGAAATCATACCAAGTATTTTCTCTGACCACAATGAAATTAAACTAGAAATCAATAACAAAAAGATAACTAGAAAATCCACAAATACATGGAAATTAAACAACATGCTCCTAAATAACCAATGGGTAAAAGAAGAAATTAAGAGGGAAATTAAAAAATATTTTGAAATAAATGAAAATGAAAATACAATATACCAAAATCTATGGAATTCAGGCAAAGCAGTACTTAGAGGGAAATTTATAGCACTAAATGCCTACATAAAAAAAAAAAAAAGATCTAAAATTAACAACCTAACATTACAACTCAAAGAACTAAAAAAACAAGAACAAACTAAATCCAAAACTAGCAGAAGAAAAGAAATAATAAAGATCAGAGCAGAAATAAATGAAATAGAAACAAAAAAAACCATTAAAAAAATTAATGAAACCAAAAGCTGGTTTTTTAAAAAGATCAATAAAATTGATAAACCTCTAGCAAGACTAACTAAGAAAAAAAGACAGAAGACCCAAATAATCAAAATCAGAAATGAAAAAGGAGATATCACAATTGATCCCACAGAAATACAAAGGATCATAAAAGACTATTATAAACAACTATATGCCAACAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGAAAAAATACAACCTACCAAGATTAAATCATGAAGAAATAGAAAACCTGAACAGACCAATAACAAGCAATGAGATTGAATCAATAATTAAAAATTTACAAACAAAAAAAAGTCCAGGACTAGATGGCTTCACAGCTGAATTCTACCAAACATTTAAAGAAGAACTAATACCAATTCTTCTCAAACTATTCCAAAAAATAGAAAAAGAGGGAATACTTCTAAACTCATTCTATGAGGCCAGCATTACCCTGATACCAAAACCAGGCAAGGACACAACCAAAAAAGAAAACTTCAGACCAATATCCCTGATGAACATAGATGCGAAAATCTTCAACAAAATACTAGCAAACTGAATCCAGCAACACATTAAAAAGATAATACACCATGATCAAGTGGGATTCATCCCAGGGATGCAAAGATGGTTTAATATATACAAATCAATTAATATAATCCATCATATAAACAAAAAAAAGAAGAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCTTTTGACAAAATCCAACAACTCTTTATGATAAAAACTCTCAGTAAACTAGGTATAGAAGGAACATTCCTCAAAATAATAAAAGCCATCTATGACAAACCCACAGCTAACATCATACTGAATGAGGAAAAACTGAAAGCATTTCTTCTAAGAACTGGAACAAGACAAAGATGCCCACTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTAGCCAGAGCAATTAGGCAGGAGAAAGAAATAAAGGGTATCCAAATTGGAAAGGAAGAAATAAAATTATCCTTGTTTGCAGATGACATGATCGTATATCTAAAAAACCCTAATGACTCTACAAAAAAACTCCTAGAACTGATAAAAAAATTCAGCAAAGTTGCAGGATACAAAATCAATATACAAAAATCAGTAGCTTTTCTATACACCAACAATAAACAATTTGAAAATGAAATCAAGGAAGAAATCTCATTTACAATAGCTTCAAAGAAAATAAAATACCTAGGAATCAAACTAACAAAAAAAGTGAAAGATCTCTACAATGAAAACTATAAAACACTACTAGAAAAAAATTAAAAGAAGACAAAAAAATGGAGAGATATTCCGTGCTCATGGATTGAAAAAATCAATATTGTTAAAATGTCCATACTACACAAAGTAATCTACAGATTCAATGCCATCCCTATCAAAATTCCAATGACTTTCTTCACAGAAATAGAAAAAACAATTCTAAAATTCACATGGAACCACAAAAGACCCAGAATAGCCAATGCAATTCTGAGCAAAAAGATGAACAAAGCTAGAAGCATCATACTACCTGACTTCAAATTATACTACAAAGCTATAGTAATCAAAACAGTATGGTACTGGCATAAAAACAGACACATAGATCAATGGAACAGAATAGAGAGCCCAGAAATAAACCCACACATTTATAGTCAACTGATCTTTAAAAAAGGGGCGAAAAATAAACATTGGGGAAAGAATATCTTATTAAATAAATGGTGCTGGGAAAGCTAACTAGCCATAAGAAGAAAAATGAAACTGGATCCCTATCTCACACCTTATACAAAAATAAATTCAAGATGGATTAAAGACTTAAATCATAGACCTAAAACTATAAAAATCCTAGAAGAAAACATAGGGAAAATGCTTCAGGACATTGGTTTGGGCAAGAACTTTTTGGGTTAAAAACCTAAAAAAACAATGGCAACAAAAGCAAAAATTGACAAATTGGATTTCATCAAACTAAAAAGCTTCTCCACAGCAAAAGAAACAACAATGAGAGTGAAGAGGCAACCTACAGAATGGGAGAAAATATTTGCAAACTACTCATCTAATAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATCAACACGAAAAAAATAAACAACCCAATCAAAAAGTGGGCAAAGGACTTGAACAGACACTTCTCAAAAGAAGACATTCAGATGGTCAAAAAACACATGAAAAAATGCTCAACATCACTGGTCATCAGGGAAATGCAAATCAAAAACACAATGAAAAAACCACTCACAACACTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCAGTTTATTTTAAAGTTAAATATTTACTGGGTATATACCCAAAGGACGGGTATTTACCTAAGAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCACCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAACAAATTTCCAATTCAAAAAGATAAAAAAAGAACAACAATAAATAAAAAGAAAGCACAAGAAGGAAATAATAAAGATAAAAGCAGAAATTAATGAGGTAGAGAACAGAAAAATAATAGATCAAATTAATAAATCAAAATCCTGATTCTTTAAAGAAACAAAAAAAATACTAATTTAAAGAATAAAAAAAAAAAAAAACATAAATATATAAAAATAAAAAATGATATGAGTTAAAACTTTTAAAAAAAAATATAGATCAATGTAAATAGATATGAAAATCAAGAGAAAATAATTA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MC4.ORF1.hs0_human.marg,L1MC4.ORF2.hs1_chimp.marg,1128,2160,2747,6649,6941,292
L1MB8,AAGGAGAAAAAAATGAAGAAAAGTGAACAGAGCCTAAAAGGGACCTGTGGGACACCATCAAGCAGACCAACAGACCAACTTATACATTATGGGAATATTAGAAGGAGAAGAGAGAGAGAAAGGAGCAGAGAGATTATTCAAAGAATAATAATGGCTGAAAACTTCCCAAGTTTATTGAAAAACATTAATCTATACATCCAGGAAGCCCAGAGAACTCCAAGTAGAGATAAACACAAAAGGATCCACAAATTGACACATTGTAGTAAAATTATTGAAAGCCAAAGACAACGAGGAAATCCTGAAAGCAGAAAGCAAAAATTAACTCATTCACATACAAGGGAACCCCAAATATCAGGTGAACAGCTGACTTCTCATCAGGAACAATGGACTCCAGAAGGTAATGGGATAATATATTTAAAGTGCTTGAAGGAAAACTCATGTCAGACAAGAATCCTATATCCAAGAAAACTATCTTTCAAAAATGAAAGAAAAATAAAGACATTCCCAGATAAACAAAAACTGAGAGAGTTTGTTGCTAGCAGACATGACTTACAAGAAATGCTAAAGAAATTCCTTCAGGTTGAACAAAATAAGAAGATCTGTAAAACAACTACTTAATAAAACTAATAAAAACCGCTTTAAAAAAATGTTTAAGTATCTATAAATGGTCTTAGAGGCAACAAATATCTAGAAATGTTCCTTAAAAAAAAACACATGGATCATGTAATGAATAAATAAATAAATATGTAGTCAAGAAAATATATTAAAAATCTTAAGTCTCCCATAATCAGAAACTAAAGTTAGAATATCAGGAAGAAAAACTGTACTATTGTCCCAATGCAAATTTGAAGGATGTCAGAGGTTTTGCAAAGGAAAAAAACAAACTGCAAAACAGAAAACTAAATATCTATTCCCAAAGAAACTAACTTAATTTGTCATAGAGTGTGAATAAGTTAAAAAATAAAGGTGCTTTAAAAAAAAATAAAGATAATGATGAAAAGCAATTGGAGAGAGATTGATGGATTCTTTGGAAATGAAGGCTGCAATGTAGGCTAGCTACTTTGCTAAAGTGAACAATAAATAAAGACAACTAGAAAGTATACTAATAACTTCAAAACATATATCAAAAACCGACATAAAGAACTATATCTTCAAATAATCCTAAATTTGATTGAATCTGTTGATAAAGCAATCTATACACCAGGGCATTATTAAAAAAAAAAAAATAAGAAGCTAGCAATTAATAAAATTGAATATGCACAAATAAAGAGAAATTCAAAGAATACCAAGTTAAAGACTAAATAATTGAAGAAAAAAAAGTAAATAAACTATAAAATTAGGAGTATTATTACTTAAGGCATACTGCAACCAGGGAAAAAGACAAATCTAGTGTTGAATGTGAACTATACAAAACACAACCCACAGAGAAAGTAAAACAACAACCCAGGGTACAAATCACAGAGTGGGTACTAGAATTTGAGAAAGAGCTTTACCTAAGGTATCCAAAATAAAAAATAAAAGTAAGCTACATTAAATGACCCCAAAGGCTGACACGTGTACAAGGGATCAAAAAAAGGTAATATCTACTATATTTAATTTCTAACAAATATAGAATAACATTCAAAAAACAGTAAAATTTGACACTAAAAGGAAAAAAAAGTGAAAATGAAAAGTAAAAGTACAGATGCGAGAGATAACAAAAAGATATTTAACAAATGAAATGAGAAATTTGAAAAGATAAATCAAAAATATTTCAAAAGTTATAGGAATAAATAAAACAACAGATTCAGAAGAAAAGTAAGACATTACAGTGAATGAAAAGATAAAGAAAAAGATAGCATCTGGAAAAAGGACCAAAAAAAAATATATGAATAAAATAAGTAACAACAGAAAAGAAAAAAGGTATAGAGGGGAACAAAAGCATATGTAAAGAGAAGGCGAAAAATGGAAGAAAAATGATGATACATTAAGACACATAAAAAAAAATAAGGCAATAAAAAACCCCAATTTATTGATACATAGTAATTTAAATATGGAAAAAGAAAAACCAACACAAATTAACAAAAATCGGAAGAATTCCACGCTAACATACATCCCCTTCAAGGTGTTGGAAGGGAAAGTCAATGGGCTGAAAGAAAGGAATCCAAGAAAGACATTGAAAGATACATAGACAAACAAAGAGCATTGCTACAGTTGATAAATTATGATAGACAATACAAGAAAGTATCTTGTGCCTCCTTACCTATATTAACAAACATCCATACAAAGTGACTTGTAATAGATTAAAATATTGTATAGAGATAATTCAAACATGAAATATTTTAAAATAGACAACCTAGAAAAGATGCTGTAGAAATAAAGATCAAATGTAGTAAAATAAAACTAAAAAATCATTTTGTAAGAAAACAAATTAACTTAAGGAAACAAAAAGAAATAAAAGTAATAAATAATAAAATTTATGCTACAAACACGATAAATTTATTTTTTATCTTCTTTTTTTTTTTATTTTTATAAAATACATAAAAAAAAGAAATAAAAAAAAAAATTATTAAGTATGGAGTTTGTAGCGTTTAAAGTTTGAATAAAAGTAAAACTACAAAAAGGGGGAAAGGAAATGGAACTATATTGGAGTAGCGTTTCTCTATCTCACTGGAATTAAGTTAGTATTAATCTGAAGTAGAATATCATAAGATAAAATATGAATTGTAAGCCGTCAAGCTCCACATCAGGAAATAACTAAAAAAGACAAATTAAAATAATTAAAGTGTTAAACTAGTAAATTTAGACTTACTATAAAATAAAGGAGAAGAGAAAAAGGGGAACAAAAAAGACATGAGACATGTAGCAAAAAAAAATTAAAAAAGGTAGATATATGACAGAGCAGGAGTAAATCCAATGATAGAAATAATCAGATTAAATGGGAATAGACTAAACATGCCACTCAAAAGGCAGAGACTATCATATTGGATAAAAAATAACAAGATCCAACTATATACTGTCTATAAAAGAAAAAATTTTAGATTCAATGATAAAAATAGATTGGAAGTTAAAAAAATGAAAAAATAATTCCATCCAAAAGCTAACAATAAGAAAGCTGAATGGGCTATACTAATATCAGACAAAATAGACTTTAAGATAAATAATATTACTAGAGACAAAGAGGGACATTTTATAATGATAAAAGTGGAATCAATCTATCATGAAGATATAACAATTATAAATGTATACGAACCTAACAACAGAGCCCCAAAATGTATGAAGCAAAAACTGACAGAAATGAAGAGAAATGAAAACAACATAACTAACGGAAAAATAATAGTTGGAGACTTCAATACCCCACTGTCAATAATGGATAGAACAACTAGACAGATTAACAAGGAAATAAAAGACTTAGACAACACTATCAACCAACTTGACCTAACAGATATCTATAGAAAGTTCCAACCAACAAGAGTAGAATATACATTCTTTTCAAGTGCACGTGGAACATTCTCCAGGATAGACCATATGCTAGGCCACAACACAAGTATCAATAAAATTAAAAAAATACAAGTAATACAAAATATGTTCTCTGACCACAATGGAATAAAATTAGAAATCAATAACAGAAAAAAAATTGGAAAATTCACAAATATGTGGAAATTAAACAACATACTCCTAAATAACCAATGGGTCAAAGAAAAAATCAAAAGGAAAATAAGAAAATACTTTGAAATGAATGAAAATAAAAACACAACATATATCAAAAATTATTGGGATGCAGCTAAAGCAGTGCTTAGAGGGAAATTTATAGCTGTAAATGCCTATATTAAGAAAGAAGAAAGATCTCAAATCAAAAACCTAACCTTCCACTTTAAAACACTAGAAAAACAAGAGCAAAATAAACCTAAAGCAAGCAGAAGAAAGGAAATAATAAAGATTAGAGTAGAAATAAATGAAATAGAGAATAGAAAAACAATAGAGAAAATCAATAAAACCAAAATTTGGTTCTTTGAAAAGATCAACAAAATTGACAAACTTTTAGCTAGATTGATCAAAAAAAAAAAAGAGAAAAAAATTACTAAAATCAAAAAGGAAAAGACTAAAATTCCAAAATCAGGAATGAAAGAGGAAACATTACTACCAACCCTTACAAAAATAAAAAGGATTATAAAGGAATACTATGAACAATTGTATGCCAATAAATTAGATAACTTAGATGAAATGGACAAATTCCTAGAAAGACACAAATTACTGAAACTGACTCAAGAAGAAATAGAAAATCTGAATAGACCTATAACAAGTAAAGAGATTGAATTAGTAATCAAAAAACTACCCACAAAGAAAAGCCCAGGCCCAGATGGCTTCACTGGTGAATTCTACCAAATATTTAAAGAATTAATACTAATTCTTCACAAACTCTTCCAAAAAATAGAAGAAGAGGAAACACTTCCCAACTCATTCTATGAGGCCAGTATTATCCTGATACCAAAACCAGACAAAGATATCACACAAAAAAAAAAAAAACTACAGACCAATATCCCTTATGAATATAGATGCAAAAATCCTAAAAAAATAACTAGCAAACTGAATCCAGCAACATATAAAATGATATATCATGACCAAGTGGGATTTATCCCAGGAATGCAAGGTTGGTTTAACATCTGAAAATCAATTAATGTAATACATCATATCAATAGAATAAAGAAAAAAAATCACATGATTATCTCAATAGATGCAGAAAAAGCATTTGACAAAATCCAACACCCTTTCATGATAAAAACACTCAACAAAAATAGAATAGAAGGGAACTTCCTCAACCTGATAAAGAGCATCTATGAAAAATCCACAGCTAACATCATACTTAATGGTAAAAGACTGAATGCTTTCCCCAAAAGATCAGGAACAAGGCAAAGATATCCACTTTCACCACTTCTATTCAACATTGTACTGGAGGTTCTAGCCAGGGCAATTAGGCAAGAAAAAGAAATAAAAGGCATCCAGATTGGAAAGGAAGAAGTAAAACTATCTCTATTTACAGATGACATGATCTTGTATATAGAAAATCCTAAGGAATCCACTAAAAAACTATTAGAACTAATAAATGAGTTCAGCAAGGTTGCAGGATACAAGATCAATATACAAAAATCAATTGTATTTCTATACACTAGCAATGATCAAAAAAAAAATAAAAATTTAAAAAACAATTCCATTGACAATAGCATCAAAAAAAATAAAATATTTGGAAATAATTTAAAAAAAAAAAGGAAAACATTTAAACTTGAAATTTCTAAAACATTGTTGAAAGAAATTAAAGAAGATCTAAATAAATGGAAAGACATCCCATGTTCATGGATTGGAAGACTTAATATTGTTAAGATGGCAATACTCCCCAAATTGATCTACAGATTCAATGCAATCCCTATCAAAATCCCAGCTGACTTCTTTGTAGAAATTGACAAGCTGGTCTTAAAATTTTATGTAGAAATAAAAGAGACCCAGAATAGCCAAAACAATCTTGAAAAAAAGAACAAAGTTGGAGGACTCACACTTCCCGATTTCAAAACTTACTACAAAGCTACAGTAATCAAGACAGTGTGGTACTGGCATAAGGATAGACATATAGATCAATGGAATAGAATTGAGAGTCCAGAAATAAACCCTTACATTTATGGTCAATTGATTTTCGACAAGGGTGCCAAGACCATTCAATGGGGAAAGAATAGTCTTTTCAACAAATGGTTCTGGGACAACTGGATAACCACATGCAAAAAAATGAAATTTGACCCCTTCCTCACACCATATACAAAAATTAACTCAAAATGGATCAAAGACCTAAATGTAAGAGCTAAAACTATAAAACTCTTAGAAGAAAACATAAGAGTAAATTTTCATGACCTTGGATTTGGCAATGGATTTTTATTAAATGAAATCAAAAACATAAGCAAAAAAAGAAAAAAAATAGATAAATTGGACTTCATCAAAATTAAAAACTTTTGTGCTTCAAAGGACACCATCAAGAAAGTGAAAAGACAACCCACAGAATGGGAGAAAATATTTGCAAATCATATATCTGATAAGGGACTTGTATCTAGAATATATAAAGAATTCTTATACAACTCAATAATAAAAAGACAAATAACCCAATTTAAAAAGTGGGCAAAGGATTTGAATAGACATTTCTCCAAAGAAGATATACAAATGGCCAATAAGCACATGAAAAGATGCTCAACATCATTAGTCATCAGGGAAATGCAAATCAAAACCACAATGAGATACCACTTCATACCCACTAGGATGACTATAATTAAAAAGACAGATAATAACAAGTGTTGGCAAGAATGTGGAGAAATTGGAACCCTCATACACTGCTGGTGGGAAAATGTAAAATTGTTCCGCCACTTTGGAAAAACAGTTGGTCATTTCCTAAAAAAGTTAAACATAGAGTTACCATATGACCCCCAGCAATTCCACTCCAGATATATACCCAAGAGAAATGAAAACATATATCCACACAAAAACTTGTACATGAATATGTTCATAGGAGCCATTTTCATAATAGAAAAAAGGTGGAAACAACCCAAATGTCCATCAACTGATGAATGGATAAACAAAATGTGGTATATCCATACACTAGAAAATTATTTTGCAATAAAAAGAATGAAGTACTGATACATGCTACAACATGGATGAACCTTAAAAACATTATGCTAAGTGAAAGAAGCCAGTCACAAAAGACCACATATTGTATGATTCCATTCATAATGAAATTTCCAGAATAGGCAAATCTATAGAGACAGAAAGTAGATTAGTGGTTGCTTAGGGATGGGGGGGGGGGGGGGTGATTGCTAAAGGGTATGGGGTTTCTTTTTGGGGTGATGAAAATGTTCTAAAATTGATTGTGGTGATGGTTGCACATATCTGTGAATATACTAAAAAACATTGAATTGTACACTTTAAATGGGTGAATTGTATGGTATGTGAGTTATATCTCAATAAGGCTTTTAA,ORF1 MACSE reconst added to beginning,L1MB8.ORF1.hs7_bushaby.marg,L1MB8.ORF2.hs8_ctshrew.marg,0,585,2873,6743,6987,244
L1MD2,TTTAAAAAGAAATAAAGGCTTCCACTTCTGGCCAAGATGGAGTAACAGAGACCAATTTACTCTCATGCTTGAAACAACCAAAAAAACAGACAAAATATATGAAACAATGGTTTTTAAGACACTGGATATCAGGCAATGAAGGGCAGTGATCTCTCAATGATGGTAAACAAATTAGGTAAGTCCTGCGATTGCTCCAGCTTACCTCCTTGAGAGAGTTTCCAGGCTGTGGTGCAGGGAGGAAACTGGGCAGAGCCTGGCAAGTTCCCTGAGTTGAGGAGATGAGCTTTGAATCGGGAAGACCAAGACAGAGTTTATACAACAGAGTACCAACAAGGAGAAAACTGCACAAAGAAAGCCGAAGACCTGCAGAGGGTCCCCTTGGAGTATCCAGCAGAGTACTGATCAGTACATGCATGTGAGAAAACCACCCATTGCCAGGAAAAGAACTCCTCAAAAGGATTAGAGAGAAGAGTACCCGGCACTCACAAAGAGTGGGGAATAATGCCTGTTCCCACAAACCAAACTGGAAAACCTCACAATTTACAGGGCTTTGGGTAGAGTGCTAGGAAAGTCTTGCCTCAATAATGGGGAATAATTAGCCCCAGTCTAAACACAACTCTGGCCCTGCCTAACAAATCTTAAAAGCAAGACCCAGAAGGATCAAACTGTTTCCAAGTAACTTAAATGCAACCCAGAACAAAGCTTAAGAATGTTTACATAAATACAAAAATTTCCAGTACCCAACAAGGTAAAATTCACAATGTCTGGCATCCAATCAAAAATTAGCAGCAAGGAAAGAAGGAGGAAAATATAACCCATAAAAAAGGAGCAAAATCAATCAATCAAACCATCCCAGAATTGACACAGATGTTGAATTAGCAGACAAAGACATTAAAACAGTTTTTATAATTGTATTTCATGTGTTCAAAAAGTGAAGTAGAGACATGGAAGATATATTTTAAAAAAGAACCAAATCAAACTTCTAAAAATAAAAACTTTAATATCCAAGATAAAAAATCCCCTGGACGGGATTAGTAACAGATTAGCTATTGCAGAAGAAAATATTAGTCAACTAAAAGATATACTAATAGAAAGATCCAAAATGAAATACAGAGAGATATAGAATTAAAAATTAAAAAGACAAAGTATCAGTTAGCTGTGACACAACTTCAGTTGGCCTAATATACATGTAATTTGAGTTCCTGAAGATGGGAGGGGGTGGAGAGAAAATACTAAAGGGGAAAAAACAGAGCAGAAAAACTGGAAACTCTAAAAATCAGAGCACCTCTCCTCCTCCAAAGGAACGCACCTCCTCACCAGCAATGGAACAAAGCTGAATGGAGAATGACTTTGACGAGTTGAGAGAGGAAGGCTTCAGAATAAACAAAGTCTTAGGGATCTGTGGAAACTCTAATTCAAGATTTATGAAAGAAGTTAAAAACCTTGAAAAAAAATTAGATGAATGGCTAACTAGAATAACCAATGCAGAGAAGTCCTTAAAGGACCTAATGGAGGTGAAAACCACGGCACGAGAACTATGTGATGAATGCACAAGCCTCAGTAGCCAATGCAATCAACTGGAAGAAAGGCTATCAGTGATGGAAGACTAAATGAATGAACTAACAGAGTCCCAGAAGGAGAGAAGAAAGAGAATAAAAAGAAACAAACAAAGCCTTCAAGAACTAAATATATATGTAAAATCTGAGTTCCTGAAGTTGGGAGGTGTTACTGAAAAAGATGGGGAGAATGGAACCAACTTGGAAAAAATACTAGTTGAAATAATGGCTAAGAATTTTCCAAATTTGGCAAAAGACACAAACCTAAATATACATAAAAAACCTAAAAAACCACAAAGATAAAACAACAAAAGAAATGCTACCCAAAGACACATCATAATCAAACTTTTGAAAACTAAAATTAAAAAAAAAATCTTAAAAACAGCCAGAGAGAAAAAACACATTATTTATAGAGGAACAACAATTAAAATGACAGCAGATTTCTCATCAGAAACCATAGATGCCAGAAGAGAGTGGAGCAGAATATTTAAAATATTGAAAGAAAAAAATTTAAATCCCAAAAATTAATATTCATTAAAAAAAACCTTCGTGAATGAAGGTGAAATAAAAACATTCTCAGATAAAAAAAAACTAAGAGAATTTATTACTAGCAGACCTGTTCTAAAAGAACTCCTAAAGGAAGTCCTCAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGATAAAAATTATACCGAATGGAAATATGGAACTACACAAAGGAATGAAGAACACTGGAAATGGTAACTACATGGGTAAATACAAAATACTTTCTCTCATTATTTAAATGTCTATAAAAGATAATTGACTTAAACAAAAATAGTGTAGTATGGTGGTTATAACATAGGTACTAGTTACCCATGAGAACTAGTGTGATATCACTTGAAGATAGACTGTGGTAAGTTAAAGATATATACTATAAACCCTAAAGCAACCGCTAAAATAACCCAAAAATTATAGCTGATAGACCAACAAAAGAGATGAAATAGAATTATGAAAAATAATCAAAAAGAGACGCAAAAAAAGGAAGAGAGTGAACTAAGAACAGATAGGACAAACGAAAAACAAACATCAAGATTATAATTTAGTCATAATTATATTAAATATAAAGTCTAAACACCCAATTAAAAGGTAGAGATTGTCAAATTGGATAAATACAGAATCAAATATAAAAATAACAATAATAAAATTAAATATAAATGGGCTAAATACTTCAATTATAAAACACAGATTGGCAAAATGGATTAAAAAGAACCCAACAATGTTTTGTTTAGAAGAAATTCATTTCAAATGTAATGATATAGATAGGTTAAAAGTAAAAGGATGGAAAAATATATACCATGCAAAAATTAATCAAAAAAAAGCAGGAGTGGCTATATTAATATCAGATAAAATAGATTTTAAAGCAACGAAAATAAACAGAGACAAAAAAGGACATTACATAATAATAAAAGGATCAATTCACCAAAAAGATATAACTATCATAAATATATATGTAACCAACAAAGGAGCAAAATTCATTGAACCAAAAATAATAGAAATAAAAAGAGAAATAGACAAATATACAATTATAGTTGGAGACTTCAACACCCTTTTCTCAACAATTGACAAAATAACTAGACAGAAAATCAGCAAGATAAAAGAACTGAAAAACACAATCAACCAACAAGATCTAATTGATATATATAGAATACTCCACCCAACAACAGCAGAATACACATTCTTTTCAAATCCACATAAAACATTCACCAAGATAGACCATATCCTGGTCCATAAAATAAACCTCAACAAATTTAAAAGAATTGAAATCATACAAAGTATGTTCTCTGACCACAATGGAATCAAACTAGAAATCAATAACAGAAAGATAACAAGAAAAACCTCAAACACTTGGAAATTAAACAACACACTTCTAAATAATCCAAGTGAAAAAGGAAAAATCAAAGGAAATATTAAAATATACATTGAAATGAATGAAAATAAAAATACAACATATCAAAAAATGTGGGATACAGCTAAAGCAATGCTGAGAGGGAAATTTATAGCATTAAATGTTTTAATTAGAAAAGAAAAAAAATCTAAAATCAATAATCTAAATTCCCACCTAAAGAAACTAAAAAAAAAAGAACAAAATAAACCAAAAGAAAGAAGAAGAAAGAAAATAATAAAAATAAAAACAAAAATAAATGAAATTAAAAAAAAAAAAACAATAGAAAAAATCAATGAAACAAAAAGCTGGTTCTTTGAAAATATCAATAAAATTGATAAACCTCTAGCAAGACTGACAAAAAAAAAAAAGAAGATACAAATTACTAATATCAGAAATGAAACAGGAGATATCACTACAGATCCTGTAGACATTAAAAGGATAATAAAAGAATACTACAAACAACTCTACACACATAAATTTGACAACTTAGATGAAATGGACCAATTCCTTAAAAAGCACAAACTACCAAAACTCAACCAATATGAAATAGATAATCTGAATAGCCCTATAACCATTAAAGAAATTGAATTTATAATTAATAAAATACCTACAAAAAAAAATCTCCCAACTCCAAAAGGTTTTCCAGGGAAATTTTTACAAAACTTTTAAAAAAAAATAAACATAAATTTTAAAAACTTTTTCCAAGAAAATAAAAGAGAGGAAATCTTTCCAAATTCTTTTATTAAAGCCAAAAATTTCCTGATAACAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAATTAAAAACAATATCTCTCATGAATATAGATACAAAAATCCTCAACAAAATATTAGCAAATAAAATAAAACAATATATAAAAAAATTTATACATAACCAAGTGGGATTTTTTCCCAGGAATGAAAGACTGTTTAAATTTTAAAAAATAATCAATGTAATTCACCATATCAACAAGCTAAAGAAGAAAAATCATATGATCATATCAATTAATGCAGAAAAAGCATTTGACAAAATTCAACACACATATAAAATAAAAACTCTTAGAAAAATAGGAATAGAAGGGAACTTTCTCAACTTGATAAAGAACATGTACAAAAAAATCACAGCTAACATTATACTTAATGGTGAAAAACTGAATTCTTTTCCCCTAAAATTAAGAACAAAGAAAAGATGTCCACTCTCACCATTCCTATTCAAAATAGTACTAGAAGTAATTGCTATTAAAATAAGTAAAGAAAAAAAAATAAATAAAAAACAAATTGAAAAGAAAGAAAAAATAAAATTGTTCCTATTTACAGATGACATGATGGTCTACATAAAAAATCTAAAAAAATTAATAAAAAACATAAAAAAAATAATAAAACTAATAAGTGAGTTCAGCAAGGTTACAGGATACAAGATCAACATACAAAAATCAATTACATTTCTATATACTAACAATGAACATATGGAAACAAAAATTAAAAATATAATACCATTTACAATCACTCCAAAAAAAATGAAATACTTAGGTATAAATTTAACAAAAAAAATTATGGAATTTTTATGTTATGAAAATTACAAAATACTGATGAAAGAAATCAAAGAAGACCTAAATAAATGGAGAGACATACCATGTTCATGGAATAGAAGACTCAACATAGTAAAGATGTCAATTCTCCCCAAATTAATATATAGATTTAATACAATTCCTATCAAAATCCCAGCAAGATTTTTTGCAGATATAGACAAACTTATTCTAAAATTTATATGGAAAGGCAAAGGAACTAGAATAGCTAAAACAATCTTGAAAAAGAAAAATAAAATAGGAGGAATCACTCTACCTAATGTTAAGACTTACTATATAGCTACAGTAATCAAAACAATGTTGTATGGGTAGAGGGATAGACACATAGATCAATGGAACAGAATAAAGAACTTAGAAATAGAAAAAAAGATATTTAGTATACTAAATATAAACTTTGACAAAAAAATAAATCAAAGAAAAATAAAAAAGAAAAACAGTGTTTTTAAAAAAAATAGTTCTGGAATATCTGTAAATATATATAGAAAAAAAACAAACATTGATTTAGATCTAACTTTAAAACTTTATACAAAAATAAACACAAAATGGATCATAGACTTAAATGTAAAACCTAAAACCAATAAAATTTTTAGAAAAAAAATAAGAGAAAATCTTTAGGAACTAGGCTTAGGCAAAGAATTCCTAACATTAAAACCAAAATCTTCAGCAATAAAAGAAAAACTTATAAATTAGACCTCACCACAATTTAAAACTTTGTTCTGTGAAAGCACACTAAAGAAGATGACAAAAGACATAATATTCATAAAAATAAAAAGCTTTTTCAATATGAGAAAAACTAATAAAATAATAAAAGTCAAAAAAAACCTAGTAAGAAAATTGTCACAAGCTACATATCTGACAAAGAACTGGTATGTCAATAACATAAAACAAACTGAACATTTAAAAATCAAAAATAAAACAAACGTCACGATTAAAAAATGGGCCAAGGATATGAACAGACATTTCACTGAAGAGGATATACAGATGACAAATAAGCACATGAAAAGATGTTCAATATCATTAGCCATTAGGAAAATGCAAATTAAAACCACAATGAGATATCACTACACACCTATTAGAATGGCTAAAATAAAAAAAATAGAAAAAACAACAAATGCTGGGGATGATGAGGAAAAAGTTGATCACATACATTTCTGGTGGGAAATGGCTCTCTACTCAAAATGTTGGTAATCTCAAATTGTAGAAAAAAAAATAATACAACCACAATGTAAAAAAGTTTTTAAATATCTTTTAAAAATAAAACATATATTTACATTAGGCAATATATCACAGAAAGATGAAAAATTCCATTCACACAAAAATTTGTACAAAATTATTATTAGAACTTTATTTATAATAGCTAAAAAATTGATATTTACAAAAAGTGCCTCAAATCAAGAATGGTTAAAAAAACTGTGGTACCTCCACAGCGTGTAACACTCAAATCAATAACATTCTTGAAATGACAAAATTATAGAGATGGAGAACAGATTAGTGGTTGCCAGGGGTTAGGGATGGGGGGGGGAGGGGGTGGGTGTGGCTATAAAAGGGTAGCACGAGGGATCCTTGTGGTGATGGAACAGTTCTGTATCTTGACTGTGGTGGTGGTTACACGAATCTACACATGTGATAAAATTGCATAGAACTATACACACACACACACACACACACACAGATGAGTGCAAGTAAAACTGGTGAAATCTGAATAAGATCTGTGGATTGTACCAATGTCAATTTCCTGGTTGTGATATTGTACTATAGTTATGCAAGATGTTACCATTGGGGGAAACTGGGTGAAGGGTACATGGGACCTCCCTGTACTATTTCTTGCAACTTCCTGTGAATCTATAATTATTTCAAAATAAAAAGTTTATTAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1MD2.ORF1.hs1_chimp.marg,L1MD2.ORF2.hs1_chimp.pars,1235,2255,2727,6535,6964,429
L1MC4A,TGAAAGATAAAGTTTCTGAAATGAGGAATTCATTGGTTGGGCTCAATAGCAAATTAGACACAACAGAAGAAAAAATTAGAGACTTGGAACATAGGCTAACCATAGAATCAAGAAGCTGAGAGACACAAAAAAAAGGATAAAAAGTGAAGAAGAGAGGGAAAGGGACATAGAGGAGGTAAGAAACCCAAACTTGGAATCTCAGGACAGGAGAGAGAGAAAATGAGTCAGAAACAACATCCCAAGAGATAATGGCCATCACTTCCCCAGAGTAGCAGACATCAAGCCATAGATTCAAGAAGCTCCAAAAACCCCAAGCAAGAAAAATAAAAAGAAATCTACACCAATACACATCATAGTCAAATTTCCGAAAATGGAAACAAAGGAAAAAATCTTAAAAACAGTTAGAGAAAAATGACACCTTACTTATGGAGGAAAAAACTATTAGATAAACACCAGATTTCCTAGTGGAAAACATGAAGGCCAGAGGAAGTGGCATTATCTTTTAAAGTACTAAAAGAAAAGAATTATCATCCCAGAATTCTATATCCAGTGAAAATATTCTGCAAGAATGAAGGGGGAATCAAGACATTTTCAAATAAAGAAAATAGAGAATTCATTACCAGAATACCTAGTTTATAAGAATAGCTAAGAGAAGCTCTCTAAAAAGAAAGAACTCTTTATGAAACAAGTATAACATTTATACCTAATCCTGATAAAAGAAAAAAAAAAGAGCATAAAAGTAGCAATCTAAGTAAAATATTAGCAAACATAATTCCACACCACATTAAGAAAATAACACAAAATTTTAAAAATCATGACCAAGTAGGATTTATTCCAGGAATGCAAGGTTGGTTCAATATTAAGGAAATCCATTTAAAAATACACAATATTAATATATCTAAGGAGAAAAATCACACAATTATCTCCATTGATGCTGAAAAAACCTTTAGACAAAATTTAACACCCATAATGGATTTTAAAAAAATAGAAATTGTGGGATACCTTCTTAACATGATAAAATATTTAAAGTACCTTAGAACTAAAGCCAGTATCTTATTTAATGGGGAAACACTAGAGGCATTTCCACTAAGATCAGGAACCAGGTAAGGATGCCCACTATCTCTACTACTATTCAACATTATTCTAGAGATATTAGCTAATGCAATTAGACAGGAGAAATCAATTAGAGGCATAAGAATGGATAACAAAGTAGTAAAACTCTCTTTATTTTCATATTATATGATAGTATATCTGGAAAACCTTAGAGAATCAATGATAAAGCTAACTCAAACATAAAAGAATAAAATAAAATTCAGTAATGTAGCAGGATATAAAATTAACATACAAAAGTCAATAGCCTTCATATACACAAACAATAACCAGTTAGAAGATATGTTAGACAAAACCCCATTTATAATAGCAACAAAGAAAATAAAATACTTAGAAATAAACTTAACAAGAAATGTGCAAAACCTATATGAAGAAAATTTTAAAACACTCCTAAAAAACACAAAAGTAGAATTGAACCAATCTGAAAGGCATCCCTTGTTCTTGGATAGAATGACTCATAACATTATAAAGATGTCAGTTCTTCCTCAGTTAATTTACAAATTTAATTCAAGCCCAATAAAAATACCAACAAGCTTTTTTATGGAGTTAGACAAGTTGATACTTAAGTTTCATATGGAAAAACAAACATGCAAGAATAGCCAAGAAAACACTAAAAAACAAAAGATTATAAGGAGGAAACTAGCCCTACCAGATATTAAAACATACTATAAAGCCTCTATAATTAAAACAGTGTGGTACTGGCTCGTGAATAGACAAACAGACCAATGGAATAGAATACAAAGCCCAATAATAAGACCAAACTACATATGGAAATTTAGTATAGGATATAAGGTAGCTGATAAAGGTTGCATCTCAGGGTTTCAAATCACGTCCAAAGAGGACCTTTTAATGAATGGTGCTGGGACGATGGAGAGTAGCCATTTGGAAAAAAATAAAATTAGATTCATATCTTACGTCATACACAAGAATAAACTCCAAATAGATAATAGGGATCTAAATGTAGAAAATAAAACCATGCTAGTACTAGAAGAAAACATGGGTGAATTCCTCTTTAATCTAAATATAGGGAAAGGATTTCTATCTATGACTCAAAATCCAGATGCAATAAAAGAAAATATTGATAAATCTAACTATATAAAAATTTTTTGCATAGTCAAAAAACATGACAAAGACAAAGTCAAAAGACAACTGACAAACTGGGAGAAAATATTTGCAACATATACCACAGATAAAGGGCTAATATCCCCCATATATAAAGAACTCTTAAAAATTGAGGGACAAAGGACCGAAAACCTGATAAGAAAAATGAGAAAAGACATTAACAGACAATTCACAAAAGATATAAAAAAAACCGCCAATCAATTGATGAAAAAATGTTCGACCTCACTCATAATTAAAGAAATTCAAATTATAAAAACTACACTGAGATACCATTTCTCACCTATTAAATTGGCAAAAATTAAAAAGCATGACAATACATTCTGTATGATGAAGCTGTGGGAAAACTGGCACCTTCATACATTGTCGGTGGGAATACAAAGTGGTACAACCCTTCTGGAGGGAAATTTGGCAATACCTAACAAAACTACTATGCACTTACCTTTTGACTCAGCAATCTCACCTATAGGAATCTACCCTAAAGATATACCCCCAACACTATGAAAATACATATGCATAAGGTTATTCATGGTGGCATTGTTTATAATTACAAAATATTGGAAACGACCTAAATGTCCAACATACGTAGAAGAATGGTTGAATAAACGATGGCACAGCCATACAATGGAGTACTATGCAGCTGTAAAAAAGAATGAGGCAGATCTCTATGAATTGATATGGAGTGATTTCCAGGATATATTGTTAAGTGAAAAAAGCAAAGTGGAAAGGAGTGTAAGAAAGAAGGGGAGATATAAGAAAATATACATGTATCTGCTCATTTGTCAAAAAGAAACACAGGAAGGATAAACCAGAAACTAATGAGACTGGTTACCTATAGGGGTGGGTGAGAATAGGGTGGAAAGAATGGGGGAATAGGAATAGGGTAGCAGGGATGAGGGAGGGGTTGACACTTCTCTGAGTATATCTTTTTGTATAGTTCTGACTTTTAGAACCATAGTAATGTTTCATATACCCAAAAATTAAATAAATAATTAAAATCAACCAGGATGTGGAGAAAACTCCTAAAATGGAATATAAACAATAACAAATGAAGTAAACCCAGTTTATTATAAATGAATAATATAACTACACCGAAGTGGGATGAAACATAGGAAAAAAAAAAAACTAATCTAAGTAACTTTGGAAAACAGTATTTTGACTGTATGCTGTAAAGCTAAAGACAAAAAAAACTGTACACAAATACTGTACTCTAGTTAGTAGATTTGTTTTTCATAGGGGTATGGGTTAGTAATTCTGAAACTATTTTATGTGTATAATAGGATTGAGCAAATAAATAAATATATTGTGGATAATGAGAGCCAGGTTTCTCACTGTCAGAGAAAGAAGATACAAATAAGAAAAGGGGGAAGGCTAGAATGAACCCTGTGGTGTTGGATTGTAATGGGTATCAGTATGAACTCATGATTTTAAATACAATGTATTATATATAGTTTATACATATTATATCTAGCCATATGTGTACATTTAAGACAGATAAATGGATAGAGATAATATAGATATATATGTATGTGTATGTGTTTCTACACATACATATATTTCCTAGCTCTGTCCGCTGAGAGGGCCTAGAAGCAATGACACCACAGTAGCAATGAACACACCTAGCACCCAGATTTTGGTTTCTAAATACCATTCTCCAATAAAAGGAACCAGGGCTCCTTAGAGAAATGGCTGATTCCAGGGCTGGGGCTGGGGAAAATACAAGATGAGCCTGGAACATCTTGTGGTACCAGAAAGTAAGAAATTGTTAAAAAAATGTGGGAAAGAAGATTTTCACGTGTCAAAAGGACACAGGAACCAACTTGAAGGAGCTCCCAATGGCCAAATCTAGGAAAATTTGAGCATCAAAATAAATAATGATAGTATTGGATTATAACCCATAGAATAAAATAAATATCCATAAGTCCATACTAATATAAAAACTGAATAAAAAAGGTGGGTAAATGGGGAAAAAGGAAAGCTCTTCCTTACAGTAGAATTCCAATTAATAAATGGAGAAGGAATGATGGAAATGAGAAATCATCATTTGGCAAACATCACAGTAATAATTGTTGCAAGCAAGAATCATCAATGGATGCTAAAATTAGTGGGTAAAAGTTTGATGAGAAATAGGATATTTACATAGTCTCAAAGTATCTCCCCAAAAATTACTTATTAATTACAAAGGGAAAAATAGTAACTTTACAGTGGAAAAATCTGGCAGACACCACCTTAACTAAGTGATCAAAGTTAACATCACCAGTAATAAGACATACTGACATCATGTACCCCCTGATATGATGCACTGAGAAGGGCACAACATCACTTCTGTGGTATTCTTGCCAAAAATGCATAATCTTAATCTAATCACGAGAAAACAATCAGACAAACCCAAATTGAGGAACATTCTACAAAATAACTGGCCTGTATTCTTCAAAAGTGTCAAGATCATGAAAGCTCTACCACCCCCCAAACAAAGAAAGACTGAGGAACTGTCCCAGATTAAAGGAGACTAAGGAAACATGACAACTAAATGCAATGTGGGATCCTGGATTGGATCCTGAACTAGGAAAAAGACATTGGTGGGACAACTGGTGAAATTTTAATATGGTCTGCAGATTAGTTAATAGTATTGTATCAATATTAAATTTCCTTGGTTTTAATAATTGTACTGTGATTATGTAAAATGTTGACCTTTCTTTCTTAGGATCACACAGAAATATTTTAGGGTAAATGGATATCATGTCTGCAACATATTCTAAAATTATTCAGGATAAAAAAAATAATAACATAATTTTTTTATGAAGGTGTGTGTTTGGAGAGAGAGAATGAGAAAGCTAATGAAGTAATAAAATTATAACATTTAGGAAATCAGGGTGAATGGTATATGGCAGTTCTTTATACTATTTAAGTTTTATTTCTGTAAATTTGAAATTATTTCAAAATAAATTATTTTCACATCTATGGATATGTAATAATCAGATAGAAATATTAAAATATTTATATATTACATAAGATATAAAAGAAAGTTATAGAACAATATAAAAGCATATGAGTGTGTATACATACACATTCAAAAATAAAATTGTAAAAATGTTTATGGGAGAATAAGAAGTGTTATGATTTCTCTAGCTTATTTGAAAATACTTAAAATAAACACAAAGTAAATATGGCAAAATACTGATAATGATGGAACCAGTTCCAGTTCCTTGTATGTGCTAGTTCACTGTTCTCTTCTCCTCATACACTGTATGTTTACAATGTGTTCATAATGAAAAG,ORF1 MACSE reconst added to beginning,L1MC4a.ORF1.hs5_gmonkey.pars,L1MC4a.ORF2.hs10_snmole.marg,0,672,672,2961,5505,2544
L1ME1,TTTAAAAAAAAAAAATAAAGAAAAAATTTTACATTTAAGATAAAAAAATAAGGCTTGATATTTACCATCCTTCATGAAACAAATTATAAAAATTTCTAAAAATATATAATTTTAAGTAAGTTAGAATAGAGTCAATCAAATTTGTTAAAATAGAAAGATAGAAAACAGATTATGTGACCCCAGTGATTGCCCCTCTTTACTGTCTGAATATAGGAAACAGATCACTTTGAAAAAAGAACCGAGAAAGCAGCGATAAGCTTTCTTAAGATGAGAGGAAGAAGAATGGATTGTTGAATAAGGATGGTGGCTTTATTTGGCGGGCCATTTTCAGGATATAGGTTAACATAGAGGAAGCACGGCGAACTGCGGTTTGCTTGTGTCTAGGAGCCAGTACTGGTGAGTTCATGCAGGCAAAGGAACTATTCTTATAGAGGAGAATGAAAAGGTAGGAGGAAAACCAGAAAAGATCTGCAGGGGATGAGGTGGCACCCTCTGAGTGTTTGGCTGAATGCTATTCCAAGAATTCAAGAGAGGGACCTTCGTGAGGTTATGGTAAAAAGTGCTGAAAAACAGTTATTTTACAAAAATTGGCAACAAAAGAGCAGAATGCAGAAAGAGTTTTAGAAATCACTCCAACCAAGCAGACAAATCATCTTGGAAATAATTAGAACCCAACAGAGTAGGTTAAAGTTCTCCCGATGCATATGGCAACAATTTGTGACAAATATGCACGGAAGGCATATCCATTTATGTGAATCCAATATGTCCCAGTCACTGAAACTCAATTATAAAGCAAAATAAATTACAAGACAATGCATACTAGATATCGTAAATCATAGTTTAAAGCAGATCGATTCATAATGAATGCAAACGTAAAAGTCAGCATCAGACATTAAAAAAATCAACGGAACTGGCTTCAAGTAGAGAAATGTGAGAGAATAAAAATATACGGAATTTAAAGAAGCTACGTCATATTTTAAATTAAAGGAGGTGAAAACAAGGTTATAATTATTAAAAAAAAGGAAAAAGTTTTCAAAATTGTAAAATTGATATTACAATATTAGAAATGAGAATTACAATATCTGAAATAAAGAATGAACCGGATGCGATTAATTGCAAATCATACTCTGCTGGAGATAGTATTAGAAAAGTAAAAGGTCAAAAAAAACGCAAGAGAAACTTCCAGAGCAAAAAGAAGAAAAAATTTATAGTTAAAAAAACTTCTAGAGATAAAACCTACAATATGTGAGATGAAAAATACACTGGATGAGATTAATAACAGATTAGACCTTGGAGAAAAAAGAATAAATAAACTTGAAGACATAGCAATAGAAATAATCCAAACCAAAATAAAGAAGAAAAAAAAAAAAAAAAAAGATAACATCAAGGACCTGTGGGACAATGTCAAGCGGTTTAATATATGTGTAATTGGAGTCCCAGAAGCAGAAGGAGAGGGAGAAGAAGAAAAAAAATTTGTAAAAAAAATAGCTCAAAAATTTCCCAAATTTAATGAAAAACATAAACCAACAGATTCAAGAAGTTCACTAAACCCCAAACAGAAAAACATAAACAAAACCACACCAAGACACATCATAATCAAATTGCTCAAAACCAGAGATAAAGAAAAAATCTTAAAAGCAGCCAGAGAAAAAAAACACATTAGTTATAAGGATACATTATATAGAAGAAATCAAAATTTTAATGATAGAAAATTTTCATTAGAAAAAAATGGAGCCCAAAAAGAATGGAAAAACATTGTAAAAATATTGAAAAAAAAAAACCTTAGTCAACCCAGAATTCTATACCCAGTAAAAATATCCTTCAAAAATGAAGGTAAAATAAAGACATTTTCAGATAAACGAAAGCTAAGAGAATTCATTACCAGCAGACCTGCACTAAAAGAAATTCTAAAGGAAGTTCTTCAGAGAGAAGGAAAAGATAAAATTGTAAAAAAGTAATAAATTCTTAACCTTCCAAGTATAAAGAAAAAGAATAGAGTAACAAGCCACATGAAAAAAGATAGAAGGATGTTTACAAAATAACAAAGAACAAGTATCAAAAAGGAAAGTAATTACTGATTTTTTCTTATAAAGAAAACGAAGAACTTGGTTCTTTGCATACTTTTTCGAAAAGAAATATTCAAAGAAGATTTTCAGAAAGAAGGAAAATGATAGCATAGGGAAATTTTGAACTTTACAAATAAATGAAGAGCAATAGGAATGGTAAAAGTTTTGGTGTTTGAAAAAGAAAATTATATGAAAAGTTTTTTGGGCTTATATGACGTAGAGATGTAGAACATAATGAGACTAGTACAAATGACATGGGGAGGGGAATGGTAGTATATTCAATTTTGAAGGTTATTTTCTAGGTAACATTATATTAAGAATAAAATCTGAAATGTATTAAAGAAAGAAAATAAAATAGGAAAAGAAAATCAGAAAGTAACAATAATATTATATCTTATTGATGAGAAGTGGTAAAATAGTAATTGAAAGTAGATTGTGATAAATTAAAGATACATATTGTAAACCCTAAAGCAATCACGAAAACAATAAAAAAGAGATATAGGCCAAATAATCAATAAAGGAAGTAAACAAGGAATCCAAAAATATACTCTTAACCACAATAAGAACAGGACGGAAAAGAAGGAAGAAAAGAAAAAAAAAAAGAAGAGAAAAAAAGAAAACAAATAGCAAGTAACAGATATCAATAAAAATATAAAAATAATTATAATAAATGAAAATGATTTAAACACTCCAATTAAAAGGCAAAATCTACAAAATTGGATAAAAAAGCAAAAACAAAATATATGCTCTCTAAAAGAAACCTACTTTAAATATAAAGATACAAATAAGTTAAAAGTAAAAGGATGGAAAAAGATATACCATGCAAACACTAATCAAAAGAAAGCTGGAGTGGCTATATTAATATCAGATAAAGTAGATTTCAAAGCAAAGAATATTACTAGAGATAAAGAGGGACATTTCATAATGATAAAAAGGTCAATTCATCAAGAAGACATAACAATTCTAAATGTTTATGCACCTAATAACAGAGCTTCAAAATACATGAAGCAAAAAACTACAAAAATAAAAAGAGAAATAGACAAATCCACAATTATAGTTAGAGATTTCAATACTCCTCTCTCAGTAATTGATAGAACAAGTAGACAAAAAATCAGTAAGGATATAGAAGAATTGAACAACACTATCAACCAACTTGACCTAATTGACATTTATAGAACACTCCACCCAACAACAGCAGAATACACATTCTTTTCAAGTACACATGGAACATTCACCAAGATAGACCATATTCTGGGCCATAAAACAAATCTCAAACAAAGTATGTTCTCTGACCATAATGGAATTAAAATAGAAATCAATAACAGAAAGATATCTGGAAAATCCCCAAATATTTGGAAATTAAACAACACACTTCTAAATAACCCATAGTTAAAAAAAAAAATTAAAAGAAAAATTAAAAAATATTTTGAACTGAATGAAAATAAAAACACAACATATCAAAATTTGGCAGCTAAAGCAGTATTTAGAGGAAAATTTATAGCATTAAATGCTTATATTAGAAAAGAAGAAAGGTCTCAAATCAATAACCTAAGCTTCTACCTTAAGAAACTAGAAAAAAAAGAACAAATTAAACCCAAAGTAAGCAGAAAAAAGGAAATAATAAAGATAAAAGCAGAAATCAATGAAATAGAAAACAGAAAAACAATAGAAAAAATAAATAAAACAAAAAGTTGTTTTTTTGAAAAAATCAATAAAATTGATAAACCTCTAGCCAGACTGATCAAAAAAAAAAAAAGAGAAAAAACACAAATTACCAATATCAGGAATGAAAGAGGAGACATCACTACAGATTCTACAGATATTAAAAGGATAATAAGGAAATATTATGAACAACTTTATGCCAATAAATTCAACAACTTAGATGAAATGGACAAATTCCTTGAAAGACACAAACTACCAAAGCTCACTCAAGAAGAAATAGATAACCTGAATAGCCCTATAACTATTAAAGAAATTGAATTTATAGTTAAAAATTTTCCCACAAAGAAAACTCCAGGCCCAGATGGCTTCACTGGTGAATTCTACCAAACATTTAAGGAAGAAATAATACCAATTCTACACAAACTCTTCCAGAAAATTGAAGAGGAGGAAATATTTCCCAACTCATTTTATGAGGCCAGCATTACCCTGATACCAAAACCAGACAAAGAAATTACAAAAGAAAACTACAGAACAATATTCCTCATGAACATAGAAACAAAAATTCTTAACAAAATTTTTACAAAATTAAATCCAATACAATATATAAAAAAGATAATATATCATGACCAAGTGGGTTTTATCCCAGGAATGCAAGGTTGGTTTAACATTTGAAAAAAAATTAATGTAATTCACCATATTAACAAAATAAAAAAGAAAAACCATATGATCATCTCAATAGATGCAAAAAAAGCATTTGACAAAATCCAACATCCATTCATGATAAAAACTCTCAGCAAACTAGGAATAGAAGGGAACTTCCTCAACCTGATAAAGGGCATCTACAAAAAACCTACAGCTAACATCATACTTAATGGTGAAAGACTGAATGCTTTCCCCCTTAAGATAGGAAAAAAGCCAAGAATTTCACTCCTAACAATTTTATTCAACCATTTTATTGAAGTTCTAACCAATGCAATAAAGCAAGAAAAAGAAATAAAAGGCATACAGATTGGAAAGGAAGAAATAAAACTGTCTTTATTTACAGATGACATGATTGTCTATATAGAAAATCCAAAGAAATCTATAAAAAAAATACTAATACTAATAAGTGAGTTTAGCAAGGTTGCAGGATACAAGATCAATATACAAAAATCAATTTTATTTTATACTATAAAAAAAAAATTAGAAATTAAAATAATAAAAATTAAAATAACATCAAAAAATATGAAATACTTAGGGATAAATCTTACAAAAAATATGCAAAATATTTTATATATTAAAAACTATAAAATATTGCTGAGAGAAATTAAAGAAGACCTAAATAAATGGAGAGATATACCATGTTCATGGATTAGAAGACTCAATATTGTTAAGATGTCAATTCTCCCCAAATTGATCTATAGATTCAATGCAATCCCAATCAAAATCCCAGCAGGCTTTTTTGTAGAAATTGACAAGCTGATTCTAAAATTTATATGGAAATGCAAAGGACCTAGAATAGCCAAAACAATTTTGAAAAAGAAAAACAAAATTGGAGGACTAACACTATCTGATTTCAAGACTTATTATAAAGCTACAGTAATCAAGACAGTGTGGTATTGGAATAAAGATAGACAAATAGCAATAGAAAATAGAAGAGAGTCCAGAAAAATACACACACATATATATAAAAAAGTGTTTTTGAAAAAAAAAAAATTAATTTTTTCAACAAATGATGCTGGAACAATTGGAAATAAAAATAAAAAAAAAATAAACAAAATGAATTTTAATCCATACCTTACACCATATACAAAAATTAACTCAAAATGGATCATAGACCTAAATGTAAAACCTAAAACTATAAAACTTCTAGAAGAAAACATAGGAGAAAATCTTTGTGACCTTGGGTTAGGCAAAGAATTCTTAGATAAAACACCAAAAACAATAATCCTAAAAAAAAAAATTAATGATAAATTAAACTTCATCAAAATTAAAAATTTTTCTTTAAAAGACACTATTAAAAAAATGAAAAGACAAGCCACAGACTGGGAGAAAATATTTGCAAATCATATATCTGATAAAGGATTTATATCCAGAATATATAAAGAACATACAAAAATCAACAACTCAATAAAAAAAATGGCAAAAAATTTTAAAAAACACTTCACCAAAGAAGATATATGGATGGCAAATAAGCACATGAAAAGATGCTCAACATCATTAGTCATTAGGAAAATGCAAATTAAAACCACAATGAGATACCACTACACACCTATTAGAATGACTAAAATAAAAAAAACTGACAATACCAAGTGTGGTGGTGAAGATGTGGAGAAACTGGAACTCTCATACATTGCTGGTGGGAATGTAAAATGGTTACACCCCTTTTGAAAAACATTTTGGCAGTTTCTTAAAAAGTTAAACATACACCTACCATATGATCCAGCCATTCCACTCCTTAGTATTTACCCCAGAAAAATTAAAACCATATGTCTATACAAAAACTTGTACATGAATGTTCATAGCAGCTTTATTATAAACAGCCCAAAATTGAAAAAAAAAAAACCTAAATGTCCATCAACAGGTGAATGGATAAACAAACTGTGGTATATCCATACAATGGAATACTACTCAGCAATAAAAAGGAATGAACTACTGATACATACAACAACATGGATGAATCTCAAAAGCATTATGCTGAGTGAAAGAAGCCAGACAAAAAAGGTGATACATGCAGCAACAACATGGATGAATCTCAAAATCATTATGCTGAGTGAAAGAAGCCAGACACAAAAGAGTACATACTGTATGATTCCATTTATATGACATTCTAGAAAAGGCAAACTTATATATATTGAGTGACAGAAAGCAGATCAGTGGTTGCCTGGGGCTGGGGGGGGGGGGGGGGAGTGATTGCAAAGGGGCACGAGGGAACTTTTGGGGGTGATGGATTGGATGTGTTCTGTATCTTGATTGTGGTGGTGGTTTCATGAGTGTATATATTTGTTATATGTCAAAATTCATCGAATTGTACACTTTAAATGGGTGAATTTTATTGTAAATTATACCTCAATAAAGCTGTTTAATTGTTTTTAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1ME1.ORF1.hs8_ctshrew.marg,L1ME1.ORF2.hs7_bushaby.pars,1212,1940,2697,6432,6806,374
L1ME2,AAGAATGGAGCAGAAAAAATATTTGAAAAAATAATGGCTGAGAATTTTCAAAAATTGATGAAAAAAATCAACCCACAGATCCAAGAAACTCAGAGAACCCCAAGGAAAATAAATACAAAGAAAACCACACCTAGGCACATAATGTCAAACTGCTGAAAACCAAAGATAAAGAGAAAATATTAAAAGCAGCCAGAGAGAAAAGACAAAAACATTACATACAGAGAAACATTGAAAAAAATTAATAGTTGCCTCCTTTTAAGAAAAAATTAAGCCAAAAAACAAGTAAATAACATCTTTAAAGTGCTGAAAGGGAAATATCAACCTAGAATTCTATATCCAGCGAAAATATCCTTCAAAAATGAAGGTGAAATAAAGACATTTTCAGATAAACAAAAGCTGAGAGAATTCATCACCAGAAGACATGCACTACAAAAACCACAAACAACCATAAAACTGGACAAAATATATGAATCATTGGTCATCTGCTGCTGAAAAAGAGGCAGAAAAACAGATCTTACTCAGAAAATTGCAATGAGTTTAAGGGCACCTGATGATTTCTGTGGGGCTATGGCCAGAACCCATCCCCAGCTCTGGAATAAGAAATGAGTATGCAAAAGAAGAACTATGATCCTTTTTGAGGTAAAGAAAGTAGGGCCAAAGCTAAACCCCCCTGAGGCACCAGTATTCTGGACAGCAGAAGACTGTCATCAGAGAGGCTTGGCCTTATATTCAGCAATATGTAGGATTGAATCTCTAGATGAGTGGCGGGGAGACTGTGAAAGGCGTCTACCATAAAAAAGAGCACTCTGAAGTATAAGGAAGCAACGGCTAAGTGATTGAAAGCAGAACTGTAGGACAAGGATTTAGTATGTGGATAAGGATGTAAGAGTTATGACAAAACAAAAGTAAGAAAATTTGACTATCGCCTTCCGAATAATTCTAAGATAGCAGTAACAAAGGTCCCTCGGGAGTTACTTCCCCTCAGAAGTAAAGTCCACACCTTGGAGTTAGATCTACTCTGGACCAGCCTTAACCAAGCCAAAACCAAGCCCTGACGAGATCTTTAAAATTGAGAATTTGGAGATAAAATATAATATTAGAGGAACTGAAGAAATGTCTTTGGTTTTCCACAGATCAATCTAAAAACAAACAAAATAAAGCCTACACAATTTAAAGGGGGAAGCCAAAACAAGCTCAAATACAAACTAGATACTAACTAAACTTCCAACATTAAAAAAATGATAAAAGAAGAGAATTATACATTTTAAGTCGGAATCTCCACATCACTACTCTCTATTACCAATAAGTTATAAAAATCAATATAACATTAACAGAAACAGGCACACACAACTGCAAATAAACTAAAAATAATAAAACCAAATGACCATAGAAAAAAAAATTCATAGTGCCCGAACACAGAGGGCGCAAACATTGAACTTAACTGACACATAATAGAAAAAAAGTATGAAACAAATACTAAAAAATATCTGAAAGCAGTTATACAGTATATACATGTCTAGTATATATAGCACAGAAGTAAAAGAAAAAAAAACAGAGCAATATCAAAATGCAAGAAAGGAAGAACAGAAAATTTGACGTAATAGATTCAGTGAATGAACTTATTAAGAAATTGGATCCGGCAGAGCAGGAAATCAATAAATTTAAAGACACGTCTATAAAAATGAGTCAAACTGAAAAAAAATGAAAATAAATAGAAAAATAAAAAAGGGAAAATTTGATGCTAGGATACATGATTTACAGGAAACACAGAAAAGGAAGATCCTGGAAGAAGGAAATGATATAAAAAAGAAATTTAGATATATTTGAAATGTAAGGGCTCAAATACATTTCAAAAATAAGGTGTAAATATAAACATATTCAGATAAATGAAAGCTGAGCTGATTCATCACCTAAATGCCTGTATTACAAGATATGTTAAACAACCATCTACAGGATAAAGAAAAACAATATCAGGTGGCAATTTAAATATTTATATAGAAATGAAATAAATTGAAAAAAGGAAAGTTGATTGAAGGGATTTTCTTTCTCTCGTAAGTTAATGTAAAAATAATAAAATTAAAGGCAGGGTTAAAATGTATGTCGAGGTAAAGAAATAACAACAATGGTACAAGGAAACGCAAAGGGTTACATTTGTGAAGTGGGAACTGTGAAAAATATAGACAAAAGTAGAAAGATATTTTCTTATGAAGAGAGAGATGTAATGTGATAGATGTGAAGTGCTATATGTGAAGTGGTATAATATTAACTCTAAATAGACTGTGATGGTCAAATTTAAAGATTACATATTGTAATCTCTAGAGCAATCACCAAAAAAAATAGAACGAAGAAGTAGAGCTCTTGTATAGCTAATAAGTCAATAGAAGAGATAAAATGGAACCCTAAAAAATTTTATTTCACCTCAAAAAGTACAGGAAAAGGGAGAACAAATAAACAAAGATCAGATGGGACAAATAGAAAACAAATTGCAAGAATGTAGACTTATTTAACAGATAGTCAGACTGGATCAAAAAAAGCAAGACTCAACTATTTGCTACATGAAATACATTTTAAATATAAAGACACAGATAGGTTGAAAGTAAAAGGATGAAAAATATATACAATAAAAACACTAAGCACAAGAATGGTGTTGCTATATTAATATCAGATAAGGTAGACTTCAAGACAAAGAATATTACCAAAGATAAAGAGAGAAATTGTATAATTATAAAAGGGTCAATTTATCAAGAAGACATAAATACCAAAAATATGTTTGCACCTAATAACAGAGCTTCAAAATACATGAAGCAAAATTGATAAAACTAAAGGGAAACATAGACAAATTCACAATTATTAGTGGAGATTTTAAAATCTCTCCTCTAATGATAAAATAATAAGACAAAACAAAACAGTCAATGAATATAAACTAATTGAAATTTATGAACAACCAATCTAACAACTGCAAAATACACATTTTTTTCAAGTGCACATGGAACATTCACCAAGATAGATCATATGCTGGGCCATAAAACAAGTCTCAATAAATTTCAAAGGATTAAAATCATAAATATGTTATTTGACAATCATAATAGAATCAAATTAGAAATCAATAACAATAAGATATATAGAAAATTCCCCAATATTTGGAAATTAAACAATACTCTTCTAAATAACCCCATGAGTAAAAGAAAAAACAAAAAAGAAATTAGAAAATATTTTAAACTGAATGATAATAAAAACACAACATATAAAAATTTGGGGAATGCAACTAAAGAAGTCTTTAGAGGGAAATTTATAGCTTTAAATGCTTATATTAGAAAAAAAGAAAGGTATAAAATAAATGATCTAAGTTTCCAACTTAAGAAGCTAGAAAAAGAAGAACAAATTAAAACCAAAATAAGAAAGAAGAAAGAAATAATAAAAAATAAAATAAAAAAAAAAAAAAAAAAAATAAAAAATCAAAACAAAGCCAAAAGTTGGTTCTTTGAAAAGATTAATAAAATTGAAACCTCTAGCAAGACTGATCAAGAAAAAAAAAAGAAAAAAACAAATTAACAATATCAGAAATGAAAGAGGGGATATCACTACAGATCCTACAGACATTAAAAGGATAATAAAATATTATGAAAATATTTATGCTAATAAATTTGACAACTTAGATGAAATGGACAAATTCCTTGAAAAACACAAATTACCAAAACTAACACAAAAAGAAATAGAAAATCTGAATAGCCTTATATCTATTAAAGAAATTGAATTTATAATTAAAAACCTTCCCAAAAAGAAAATTCTAGGCCCATATGGTTTCACTGGTGAATTCTATCAAACATTTAAGAAAGAAATAAAACTAATATTACAAAAACTTTTTCAAAAAATAGAGGAGAAGGGAAAATTTCCTAACTCATTTTATAAAGTCAGCATAACCCTGATACCAAAACAAGAAAAGGAAATAAAAGAAAATTACAGATCAATATCTCTCATGAACATAGATACAAAAATCCTTAACAAAATATTAGCAAATAAAACCCGACAATATATAAAAAGGATAATACATCATGACCAAGTGAGGTTTATCCCAGAAAAGTAAATTGGTTTAAAAATTAAAAAACCAATCAATGTAATTCACCACATTAACAGAATAAAGGAGAAAAATCATATGATCATCTCAATAGATGCAGAAAAAGAATTTGACAAAATTCAACACCCATTCATGATAAAAACTCTCAGCAAACTAGAAATAGAAGGGAACTTCCTCAATCTGATAAAGGGCATCTATAAAAAACCTACAGCTAACATCATACTTAATGGTAAAATAATTAAATGCTTTCCCCCTAAGATTGGGAACAAGGCAAGGATGTTCACTCTCTTCATTTCTATTCAACATTGTACTGGAAGTCCTAGCCAGTGCAATAAAGCAAGAAAAAAAAATAAAAGGCATAAAGATAGGAAAGAAGAAATAAAACTGTCTGTATTTACAGATGACATGATTGTTTACATAGAAAATCCTAAGGAATCTACAAAAAACTTCTAGAAATAATAAGTGAATTTAGCAAGGTTGCAGGATACAAGGTCAATATATAAAAATACTATTTTTTTATATTGTAACAATAAAAAAATAAAAAATAAAATTTTAAAAACAATATTTTCTATAACATCTAAAAACATAAAATATTTAGGAATAAATATAAAAGATATGCAAAACATCTACACTGAAAACTATAAAATATTGATGAGAGAAATTAAAGAAGACCTAAATAAATGGAGAAATATAGAGATATACTATGTTGAAAAATTCAATATTGTTAAGATGTCAATTCTCCCCAAATTGATCTATAGATTCAATGCAATTCCAATCAAAATCCCAGCAGTTTTTTTTGTAGAAATTGACAAGATGATTCTAAAATTTATATGGAAATGCAAAGGACCTAGAATAGCCAAAACAATTATAAAAAAGAACAAAGTTGGAAGACTTACACTACCTGATTTCAAGACTAAGATAGCAAATAAATCAATGGAACAGAATAGAGAAACCAAATCAAGAAATCAAACAAAAAATCTACAGTCAATTGATTTTTGACAAAAGTACCAAGGAAATTCAATGGGAAAAGTAGAATTTTTCTCTTCAAAAAATTGTACAGAAAGAACTAGCTAAACATAAGAAAAAAAATGTACCTTGAACTCTAAACTTAACCCTATAACAAAAATTACTTGAAAAATGAATCATAGATCTAAATATAAAAGCTAAAACTATAAAACTTACAGAAGAAAACATAGAAGTTAAATATTTTTGTAACCTTCTTGGCGTAGGAAAAGATTTTCTTAGACAGAAAAGAAAAAAAAAAACCATAAAAGAAAAAAATGATAAATTTGACTTCATCAAAATTAAAAAATTATCATAATTAAAAAACAACATTAATAAAAATATAAAAATAACCCATTATGGAAGAAAGATGAGCCAATTCACCAAAAAATTGAATAGAAAAAAAATAAACCAATAAAAAATAAAAAAAAAACTAAAAATAAAAAAAAAAAAAAAAATAAAACCATTAAAAAAAATATACAATAATATTGGCAATTAAAGCATCAAAAAAAATGCTCAACATCATTAGTCATCAGGGAAATGCAAATTAAAACCACAGTAAGATACTACTATAAATTGACTAAATTGGGTAAAATAATAAAAAAAGACAATACTAAATGTGGTAAAGAATGGGAAGCAACTGGAATTCCCATGCATTGTTGGTGGGGGTGTAAAATGGTACAACCACTTTGGAAAACTAGTAAGTTTTTTAAAAAGTTAAAAATACATTTACCATATGACCCAGCAATTCAACTTCTACCTATTTACATAAAAAAAAGAGAAATAAAAATCTTTAAACAAAAAAACTTGTACATGATTGTTGATACTATCTTTATTTATAATAACCACAAACTAGAAAAAAACCCAAAATTTCAACATAAGAGAATTGAAAAAAAAAATTGTGATTTATTCATACAATGGAATACTACTCAGTAAAAAAAAACAAACTAATAAAACTTGCATGGATGAATCTCAAAAATATGATGATGAAGTTCTAGAACAGGCAAAACTAATCTATGGTGATAGAAATCAGATCAGTGGTCGCCTCTGGGGGGGGGGGGGGAGCATGTGTGTGTGAGATGAGTGTTAGATAGAATTAACTGCAAAGGGGCATGAGGGAACTTTCTGGGGTGATGGAAATGTTCTATATCTTGATTGTGGTGTTGGTTACACGGGTGTATACATTTGTCAAAACTCATCAAACTGTACACTTAAGATCTGTGCATTTTATTGTATGTAAATTATACCTCAATAA,ORF1 MACSE reconst added to beginning,L1ME2.ORF1.hs10_snmole.pars,L1ME2.ORF2.hs9_pika.pars,0,435,2502,6063,6332,269
L1ME2Z,ATGAGGAAAAACAAGTGCAAAAATGCTGAAAATTCCAAAAACCAGAATGCCTCTTTTCCTCCAAATGAGTGCAACTCCTCTCCAGCAAGGGCACAAAACTGGACTGAGAATGAGTTTGACAAATTGACAGAAGTAGGCTTCAGGAGGTGAGTAATAACAAACTCCTCTGAGCTAGAGGAGCATGTTCTAACCCAATGCAAGGAAGCTAAGAACCTTGATAAAAGGTTACAGGAACTGCTAACTAGAATAACCAGTTTAGAGAAGAACATGAATGAACTGATGGAGCTGAAAAACACAGCACGAGAACTTCATGAAGCATACACAAGTATCAATAGCCAAATCAATCAAACGAAAGAAAGGATATCAGAGATTGAAAATCAACTTAATGAAATAAAGCATGAAGCAAGATTAAAGAAAAAAAGAATGAAAAGGAATGAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAACCTATGATCGATTGGTGTACCTGAAAGTGATGGGGAGAATAAAACCAAGTTGGAAAATACACTTCAGGATATTATTCAGGAGAACATCCCCAAACTAGCAAGACAGGCCAACATTCAAATTCAGGAAATACAGAGAACACCAAGAAAAAACAACACAAAAAAAACAACACCAAGAAACATAATCATCAGATTCTCCAAGGCTGAAATGAAGGAAAGAATGTTAAGGGCAGCCAGAGAGAAAGGCCAGGTTACCTATAAAGGGAAGCCCATCAGACTAACAGTGGATCTCTCTGTAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAAAATTTTCAATGCAGAATTTCATATCCGGCCAACCTAAGCTTCATAAGCAAAGGAGAAATAAAATTCTTTACAGACAAGCAAGTGCTGAGGGATTTTTGTCACCACCAGGCCTGCCTTACAAAGCTCCTGAAGGAAGCACTAAATATGGAAAAGAAAAACCAGTACCAGCCACTGCAAAAACATACCAAAATAAAAATGAAAATAGTGCATATAAAATTTTATATGAAGGCTGGAGTAAGTATAATAGTTAAAGATAAAATAATGATCAAAATTAGAAAATACTTTGAACTGAATGATACTAAAAATAGTAAAAGTGTTATACAATATACTTAATTTAGAAAAATGGGGGAAATTATTTAATTAAATGCTTACCTTGGAAAACTGAGGACTGAGAATGATATAATTTTGCATGTTAATAAGATAAAAAAAAAAGAGCACATTAAATCCAAAGTAAGTAGAAGAAAGGAAATAATAAAGGTAACAGAAAGCAACATTAAATATAAAGCAGAGACAAGAGAGGAAATAAATAAAATAAAAACAGAAAAAAATGTTAACAAAATCCAAAGTGTGATAATTGATAATGTAACAATAATTAATATAAACATAAACAGAATAAATAAAACAATGAAAATAAATAATATTAAGGAAATAATTTTAGCAACTTTATTCCATTACTTTGACAACTTAATTGAAAATAGAAAACTAATTATATGCTTAAAAAAAAAGAGAGTTTTACCAAAAAAAATAACTGTTTAAATAAAAATAAAAGATGAAATGATTTCAATAGAAAAAATAAAAATTGTCCTGAAAAACTTTCCTATAGAGAAAACTCCAGGCTCACTGGTTTCACTATTGAATTCTATATTCCATAAAAAAAAAAATCAAAAGCTCAGAAACAGGTTTATACCGGTAAATATTAGAATATAGATGAAATACAACCTTTCCTTGAAAAATACGTCCTTCAAAAACCGAAGCAAGAAAGAAAAAAATTTGATCATACACAAAATTATTTTAGAAAATGAATTTGTTATGAAAACCCTTTCTATAAGAACTCCAGGTGAAGAGAGTATTCTCAACTCATTTTATAATCAAGCCAGCATAACTATAATATCTGAAAATAGAGAAGAGGAGACACTTTCCAACTCATTAGATAAGGTAATACATAAAACAGTTGACAAAATAAAAAAAAAAAAAAAAAATTACAGACCAATATCTTTTATGAATATAGATGCAAAAATCCTTAATAAAATATTAGCAAATCACAATCATAAGAATAGGATAACCCAACACCAGAGCACCAAGATACATAAAATGGATATTAGATCAAAAGGGAGAGATAGGTATTCCAAAGTAGCTTTCTCCGATGAATTGCAAGGCTGGTGCAAAATTGGTTTAACATTCAAAATAATCAATCAAATTCACAGTATTAATTTAATAAACAACAAGATAATATCAATACACATAAATAGATGCAGAAAAGCATTTGACAAAATTCAACACAAATTTATGATAAAAACTCACCATAAAATAAGAATTAAAGGAACATACTTCAATTTGATAAAAGGCATCTATGAAAAACCTACAGCTAACATCATATTTAATGTTAAAAGACTGAAAGCTTTCCTCCTAAAAATTAGAACAAGGCAAGGATACCCAGTCTCACCACTTCTATTCACCATTATAATGGAAATTCTAACTAATGTAAAAAGACAAGAAAAAAAAATAAAAATCATTCCAAAAGATAAGAAAGAAAGCAAAAATACTTTATTTACAGAAAATATAATTGTTTTTTTAGAAAATCCAAAATTAATCATCACAACATTTAAACAAAAAAACATAAAAATAATAAAAAAAATAAGTGGATTTAGCAAGGTCTCAGGATACAAAATTGAAATATAAAAATCACATTTATATTTATATATTAACAGTAAAAAATTAAAAAATAAAATTATTTTTAAATTTAATTTTAAAATCGCTAAAAAGATAAAAATTAAATAAATAGGAATAAAAATAACAAAAGATATGAAACAACTATACAAAAAAAACTATAAAACAATATTAAAAAAAATTAAAAAAAATAAAAAGAAATGTAAAATTTTTACATGTTTATTGATTGGAAGACTCAATATTGTTAAAATATCAATTGTCTTCCCCAAATTGATGTATAGATTCAATAGAATTTCCATTAAAAATCCAATAAGAATTTTAAATGAAGTTGATTATAAACTACATATAAAAATTTATATGGAATGAAAAAGGACCAAGAATATCCAAAGTGGACATCAAAAAAAAGAATATCCGATCTTGAGGAATTATGACTTTATAGTAAAAACAGTAATCAAACAAGATTTCAAAAGTGAAAACATTAAAATAATTATAAAAAAAAAAGAAAATCAAGAAATTAGAAGTGATAGAATTGTTGGAAATTAATTTTTAAATATGAAATTTAAGATTTTTAAAAAAAAAAGTAAGGATATCCAGCAAAGAAAAGATATCGCGTTTTTAACAAATGAATCCCAACCCCTGATATGTATAAATATGAGAAACCTGTTCTAAAAAACATTATAGAAAAAAATTAATTATAGATGGATCATGGACATAAAAGTAAAACCAAAAAACATAATGTTTTTAAAAGAAAACATTGAAGAATATCTTTGTGACTTTGGGTTAAGCAAAGATTTTTTAGATATAAAAAAAACAAATCACAGAAAAATAAAATTGATCAATTACATTATATCAAAAATAAAAACTAATACATTTAAAATTACACTTATTAATATAAAAAAGACATTTGTTAAGCCAATGCCAGATGACAAACTAGCAAAAAACATATGTAACACAGGAATGTGAGAAAAATTCCTAACCATAATAAAGCGACATAGGACATATAATAAAATTATAATTCCTATAAAGAACAACAATATAATTGGCAAAAGTCTAGAAGAGGTGAAATTAAAAGGCAGATACGTAAAAAAATTTGAAAAAGTAACCATTAGCATACTAAAAAGTGCTCAAAAACACTGAGTTATCAGGGAAATTCAAAGTAAAATCACAGTAAACAACCATACAACTACAAGAATAACTGACATAATAAAAAAAATTAATACACTAAATGTTGGTGAGGATGTGGAGCAAATAGAATTCTTACATATTTCTGGTAGGAGTGTAAACTGGTAAAATAACTTTGAAAAATGATTGGGACAGTTCTTAAATATAAACCAATTTGATCTAGCAATTGTACTCCTAGGTATTTATCACAAAATAAATGAAAAATATGACAAAACAATTTGTAAATGAATGGTCATAACACCTTTATTCACAATGCACAAAAACAAGCAAATACAAAAGAGCTCAATGAATAAAGAAATTAAAGGTAATATATTTATTCATACAATGAACAACCATATGAAGTTCTAGAACAGGCAAAACTAATACATGGTGAAAAATAAAATTAGAACATTGTTTGCCTTTGGGGGGTGGGGCAGGGATTGACTGGGAAAGGGCAGGAGACAACTTTCTGGGGTGATGGTAATGTTCTATATCTTGATAAGGGTTTGGGTTACGCAGGTGTATGCATTTGTCAAAACTCAGTGAATGTACACTTAATATTTGTATATTTCACTGTATGTAAATTTATATCTAAACAAAAAAAAAACTATAAAACAAATATTGAACTCTAGTTAATGATATGCATGCTGAAATGTTTAGGAGAAAAGTGTACTGATGTCTGTAACTAACTTTGAAATGCACCAAAACATAAGATGGATTGATGGATGGATAGAGGGATGAATAGATGGATAGATATGTGATAAATCAAATATAGTAAAATGTTAATGGTAGAATCTAGGTGGTGGGTAGGTATATGGATGTTCACTGTAAAATTCTTTCAACTATGGTGTGTGTGTGAAAATTTTTATAATAAAATGTTGGAAAAAAA,ORF1 MACSE reconst added to beginning,L1ME2z.ORF1.hs4_gibbon.marg,L1ME2z.ORF2.hs2_gorilla.marg,0,1023,1023,4236,4768,532
L1ME3,GGGGTGGTTCCAAGATGGCCAAATAGGAAGAGCTCCAGTCTACAGCTCCTAGTGCGAGCGACGCAGAAGACAAGTGATTTCTGCATTTCCAACTGAAGTACCGGGTTCATCTCACTGGGGCTTGTCGGACAGTGGGTGCAGGACAGTGGGTGCAGCCCACCGAGTGTGAGCCAAAGCAGGGCAAGGCATTGCCTTACCCGGGAAGTGTAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACAGACGGCACCTGGAAATCGGGTCACTCCCACCCTAATACTGTGCTTTTCCAATGGTCTTAGCAAACTGCACACTAGGAGATTATAACCCGTGCCTGGCTCGGAGGGTCCCACGCCCACGGAGCCTCGCTCATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGTGGCAGCCAGGCTCAAGGAAGGGGCGCCCACCATTGCTGAGGCTTGAGTAGGTAAACAAAGCAGCTGGGAAGCTCGAACTGGGTGGAGCCCACTGCAGCTCAAGGAGGCCTGCCTGCCTCTGTAGACTCCACCTCTGGGGGCAGAAAATAGTTTAGGAAAAGATATCTGAGATTTTTGCAGACTTAAATGTCCCTGTCTGACAGCCTTGAAGAGAGTAGTGCTTCTCCCAGCATGGAGTTTGGGATCTGAGAACGGACAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCGAGTAGCCTAACTGGGAGGCACCCCCCAGTAGGGGCAGACTGACACCTCATATGGCCGGGTACCCCTCTGAGATGAAACTTCCAGAGAAATTATTAAACATCCACATCTGCTATTCAGCAATATTCGCTGTTCTGCAGCCTCCTCTGCTGATACCCAGGCAAACACGGTCTGGAGTGGACCTCCAGCAAACTCCAACAGACCTACAGCTGAGGGTCCTCTATAGATCAAAGAATATTAATGAATTTAAAGGAAAATGTAAGCTAGATACAACCATACTGAAGCACAACAAAGAGAAGATGTTGAAAATTCAAAAAATCAGAGGATCTCTCCCCCTCCAAAGGAAAGCAGCTCCTCGCCAGCAGCCGTACAAAATTACATGGAGAATAACTCAAATATATACAGAAGAAAACTTGACATAATGTAAGTGATCAAAATATTAAATGGAAATAATTGTTGTGTTACCATCAGAAAATATAGAAACCTTAAGAAGGTAGAAGGTGATTAACTATTTATAATAATCAGTGCAGAGAAGTTCTAAAAGAATCGAATGTAGATAAAGACCATGGCACGAGAACTACGTGACAAAATTTCTATATTCAGTAAAAAATTTATTTAAAACGAAGAAAAAAAAAAGGAGTTTGAAAATCATGTATATGAAATGAAGCGAGAAGAGAAGTTTAGAGTAAAAAAGGTGAAAAGAAACGGGTTGAGAGAAGAAGGCTTCAGATGATCAAACTTCTCCAAGCTAAAAGGAAGAAGTTCAAACCCACTGCAAAGAAGCTAAAAATCTTGAATAAAAGATTAGATGAGTGGCTAACTAGAATAATCAGTGCAGAGAAGTCCTGAAATGACCGGATGGAGCTGAAAACCATGGCACGAGAACTACGTGACAAATGCACAAGCTTCAGTAGCCAATTCAATCAACTGGAAGAAAGGGTATCGGTGCTTGAAGATCAGATGAATGAAATGAAGAGAGAAAAGAACAAAAAAATAAAAAGAAAAAAAAGAAATAACACAAAGCAACAAATATGGGACTATGTGAAAAGGCCAAATCTACGTCTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAACCAACATGAAAAACAATCTGAAAGATAATGACCAGGAAAAATTCCCCAACCTAGCAAGGCAGGCCAACATTCAAATTCAGGAAATACAGAGAATGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGATACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAGCAGCAGATCTCTCGGCAGGACTCTACAAACCAAAAGAAAGTGGAAGACAAATATTCAAAATGCTGAAAGAAAAAAATATCAAAAACAGAATTCCATATCCAGCCAAACTAAGTTTCATAGGTGAAGGAGAAATAAAATCCTTTACAGGCAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAGAAGAGCTCCTAAAGGAAGCACTAAACATGGAAAGGAACAACCGATACCATCCACTGCAAAAACATGCCAAATTGATAACTGACAAAACAGTACAGACCATCAAACCAAGGACAAAGCTGCATCAACTAATAAGGAGAATAACCAACAAATAGCAATATGAAAGAATAAAATCCAATCATAACAATATAGTGCAAATTCTACTTTATCAGTAATTACATTAAATGTAAATGAATTAAAAATACTCCAATCAGAAGGCAAAGAGCGACAGAGTGATTATTTTTTAAAAGATCCAACCAGATGTAATCTACAAAAAATCTATATTAGCATCAGCAAAAAAATCTTTCACTTTGAAATACAATGGAAAAACATGTACCATACAAACAGTAACCACAGGGTAAGAAGTATTGCTGTACTAATAGCAGACAAGATAGATAATGAAACTTTAGATTTTTTAAGATCTTCCATAGATAATAAAAAGGAACATTTTATAATGATAAAAAGGTTCAAAAAATTAGGAAGATATGACAATTATAAATGGAGGACACCTGTAAATATATATGCTAACAATAACATAATTTCAAAACATAGAAAACAAAAATTGAAAGAAATGAAAGAAGAAATAGACAACTCCAGGATTATATTTATAGTTGGAGATTTTAATATATATCCCTCAGAAACTGATAAAAAAAATGACTAGAAAATCACTAATACTATAGAAGATTTAAACATAAAGATTAACTGACTTGAATTAATTGACATATATAGAAGGCTCTATATCCAACAAGTACAGCATATAAATCCTCCTAATATGGAGGTAAGCCATGGAACGTTACCACAGCATAAAATAGACCATGTATCAGGCAAGAAAGCAAGGGGCACATCATATTTTAATGATTTAAATCAATCTAAAAGGATTAAATTCATACAAAGTATGTTATTTGACCTCCGTAGAATTAAATTAAAAATCAAGAACAGAAAGATAAAAGGAAATACTAAAAAATCATCGCATGATTGCAAATTAACCAACAAATTCTTCAATAACTCATTAGTTAAAGAAAATAAAATCACAAAGAGAATTAATAAATGCTTTAAGATGAATGATAAAAAAATAGAGCATGTGACAATTTATAAGGATTGCAACCAAGCCATGGCTTAGAGGAAAAGTTATAGCTTGAAATGCATATACTGGAAAAGAAAATTTAAAAGTCATATCAATAAAGGATCTTGGCCTTTAGCTAAGAAGAAGAAAAATAACAGCAAATTAAATCCACAGACTAACACCAAAATAGATGGAATCAAAGAAATAATAAAAATAAAAACAGAAATAAAGGAAATTTAACATACAAATATAATAGAAAAAAATCAATACAGCAAACAGAAATTTAGATTCTTTGAAAAGATTAATAAAATTAACAAATCATCTACCATGACTAATTCAACAAGAAAAATAAAGAAAAAACAAGGAGAGAAGATACAAATAGCAAGAATGAGAATTAATAGAGGTGTCCACTACAGATCCTTTAAACATTTAAAAATAAATGAGTGTAGTATTTTTAATAACTTTATCATAATAAATTTGAAAATTTTTATGACGTTAGCAGATCCTTTGGAAAAAATAAATAACATAAAAATAGAAACCAGAAAAAAAAAAAATAGAAAATATGAACAATCTATGTCTTTAAATAAATTGAATCCAATAATTAATAACGAAATTGAACTTTTCATATTAAAACTTCCCACAAAGAAAACTTCAGGCTCAAATGTTTTCAAAGGTGAATTCTCAAAAATTTGTGAGAGAGATAATATTAATCCATGCATGAACAAAATTTTGCAGAGAATAGAAAACAAAGGAACATTTCCAAACACATTTTACAAGACCAGCAGAAGCTTGATATCAAAACCATACAAGGACATTTCACTGAAGGAAAATTACTGGGCAATATCTCTCATGAATATGTATATGTTTATATATATATACACACACGCAAGAATACTAAATAAAATACTAGCAAATGGAATCCAGTTACATATAAAATGAATTATAAAAAGTGATCAAGTGAGATTTATCCTAGGAAAAAAAAAGGAATGTATTTCATCAAATACAGTTTATTTAAAATATATTAAAAAACAAATGAATGTAATTCACCGTATTACATTTAACAGAATAAATGACAAAAATAAAATGATTATTTCCATAGATATAAAAAAGTAATTCATAAATTTAAAAAAACCTTTCTTGATTAAAAAAAACAACAATTCTCAACAAATCAGGAATAGAAGGGAACTTTTTCAATCTGATAAAGAACATGTTATAAAAACTCCCACAGATAACATCATACTTAATGATGAAGTTTTGGAAGCTATTTTCCTTATGATTGGGTATAAAACGTGGATGAGCAAAGTACCACCATTCCAATCCAACATTATACAGAAGCCCCTAGAAATTAGCATAATAATAGGCGAGAGAGAGGAAAACAAGATGCAAGGTAAAACATTCTTCAAACGGTCTACTATAAACAACAAATGCGAACTTAATGAGGTTCCTGGAAACGAAGTCAGTACAAAAATAATACATTTTAATTTCCATGTATCAGCAAGACAGGGGGAACGAAATATAGAAACAAAACACCATTTACAGCAGCATTTAAAAAACATCAAATACTTAGAAATGAGTGTAATGAAATATGCGCAAGATTCATACGCTATAAACTGCAAAATGTTCTTGAGAGAAATTAAAGGACACCCAAATGAATGCAGGGAACTGTATAACGTTCATGGATTGGGATAAGATAACTGTATAAATGTCTCTTTTCTCTCCAAATTTATCTATAGATTCAATGAAATAGAAATTAAATTGAAGAACAAACCTCTGGTTTGTTGTTGTTGTTTCTTTGAGGAGATTAACATTCTTTTTCTAAAATTTATATGGAAATACAAAGATCCACTAATGGCCAAGGCTATGTTTAAGTTCAAAGCTAGAGGTCACATGCTACCAGATAATAAGGCTTTCTGTAATCGAGATTCAGAATTTAAGGAGTATTTGGTATTGACAAATAAGATCAATGGGATAGACTTGAGGGTCCAGAAAGAAATCCACTCACGTAAGTTAATCTAGGATTTTTTAAGACAAAAGCATGATTGCAATTCAGTTGAGAACGTATGGTCTTCTCAATTAATCGTATTGAATGACACTAGGATATTATTATTTAAAAAATTAACAAAATTTAATTTGGGATGGATCATAGACTTAAAGGTAATAAAACTTAAACTTTCCAAACTTCTAAAGAAACAAAAAAAACTAGGGGAATTAAGGTTTATAATTAAAGATAGAAAGAGGAATTTCATAAATAGAACTGAGAAAGCATTTTGCATAAGGATGCTTGACTTAAGAAAAAAAAACACTTTCACACATCAAAATATCATAAAGTAAGTGAAAAGTCAGTCCACAGACTGGGATAAGATATTTGTAATATATTTATATGATAATGGACTCATATCCATAAAATATATAGAACTATTTCAAATTTCAATAATAAAAAGAGAGAGAACTCAATTTAAAAATGGGCAAAAGTCTTCAATAAAGGATTTACGAAGGAGAATATCAAAATACCCGTTAACATATAACAAGTTGTTAAACATAATTATTCATCAGACAAGTAAGAAATTTAAAAATAACAATGAGATACCAATTAATCCTACCACAATAGCAAAAATTTGGAAGACTGACAACACCAAGAATGCAGAACGATGAGAACTCTCATGCGTTTCTGATGTGAGACGAGTACATGAAAGCGTTATGAAGAAACCTAAGATAGTACCTACAGAGCTAAACATTAGCATAACCTACAAACCAATAATTCTACTCTTGAGTATACGATGCCCGACAAATGATTTTGACCATGAAAATACAAGATGTACAACATACAAGAATGTTCATACCAGCTTTATTTGTAATAAGCCCCAAATAGGGAAAAAGTCAATATTCATCAATGGTAGAATGGTAAATTGTGGTATAGTCATACAATGGAATAAGCACACAGTAATAAGTATTACAGTTTGATTTCACCCATTTATATGAATTTCAAAAATATGCAAAATTAACATATGGTGATGGAAGTCAGAATAGTGGTTACCTCAGGTATGGGTGGTGATTCCTTGGAAGAGGTTAGGGTAAATTTCCTGGGGTAATGGAAATGTTCTATATCTTGATCCATGTGCTGATTACAAAGACATAATACGTATGTACATAGAAATTCACCAAGCTATACCCTTAAGATTTGTGTACTTTACTACATGTATTCTTCACTTCAATAAAATTTAT,ORF1 and ORF2 replaced with MACSE reconstructions,L1ME3.ORF1.hs1_chimp.marg,L1ME3.ORF2.hs7_bushaby.marg,1408,2305,2418,6276,6552,276
L1ME3A,GAATTCTTCTTCCAACTATGATGGAGCATCTTGTAAAATTAATTAGCTTGTCTCGGACCAACCCTCCCACCGAGAACAACTATAAAAGCTGGTTAAAATTCAAAACTTATCTGTTTGAAGGCATCAGAGATTTTCTATGTCATCAGGACTTAAGGAGCCAAGATTCCAGAGAGAAAGGAAACTCACAGAGGTGAGCCCAATCTTCTGCACTGCTTTTCCCCTTAAAAGATTTACTTATTGGTGCAGGTCATGGGGCTGAGAGACCAAGCAGAAAACAGTAGCCCAGAGGTTTGGACAAACTCACAGAGCTGTAGAAAAAAAAATTGGAGTGCAGGGCTACCAAGTTAGCAAGAACTTGAGGGGCCAATATCAGAGAGAAAAGGAAATCACAGGGCAATGGAATTAGAGAGTTCAACATTCTGCACCGCTTTTCCCCTCGAGGCATTTATCAAATTATGAAGCGGCACAGGGTAGGAGGCTAAGAAGCCAAGCAGAAAGCCTTTGCTAAGAGGCTAAAAAGGTAAATAGAAGTTTTGGCAGTCTCACAGTGCTGGAGAGACAAAAATTAGAGTTTAGGACCTGCCATGGGGAAGGGTTCCTGGAAATTTCCCAGGATCTCAGTTGGGACACCTGGAGGGATGTGCCCTAGGAGTAAGGGCAAACCAGAAATAGACTAGGCCCCAATAAGACCTGAAACCAACCTCGAATCAGCTCAGTCCTTGATTGGATCAAGGTGATCTAATTATACATGTCCCTAGCTGCCTGGCAGAAGCAAAGGTAAATCCTCTCTGGAGGAAGATAACATCATCTAGATCCTCAAATTATCCTTTCCAGTTTTTCATACATAATGTCCAGCATTCAATCAAAAATTACCAGGCATACCAGGAAACAGGACCAAATGACTAAAAACCAGGAGAAAAGAAACAGACAATAGAAACAGACCCACAGATGATACAGATATTAGAATTATCAGACATTGATTTTAAAATAACTATGATTAATATGTTTAAGAAAAGAATTAATTAAAGAGAAGAAAACTGCCAAAAATTACACTAGTTCACCACCAATGGATCCAAACCCAGAAGAAATCCCTGATCTACCAGAAAAAGAATTCAGGAGGTTAGTTATTAAGATAATAAGGGAGGGACCAGAGACAGGCAAAGCCCAATGCAAAGAAATCCAAAAAATGATACAAGAAGTGAGGGGAGAAATATTCATGGAAATAGATATCTTAAAGAAAAAATGATCAAAAATCCTAGAGTTGAAGAATTCAGTGAAGGAAATAAAAAATACAAGTGAGACCTTCCACAACAGAATAGATCGAGTTAGAAGAGAAGACATAATTTCTAAACTTGAAGACAAGTCTTTGAAAAAAACACAAGCAAACCAAAGAAAGAAAAGAGCAAAAATAATACGGAATGCATACAGGATAATAGGAAATACAATAAAGCGTACAGAAATTCACACTGTGGGTTATCCAGAAGAAGAGGGAAAAGGTATAGAAATCATATTTAATAAAATAACTGAAAACTTTCCAAGTTGTAGGACAGATATGAACATCCAGATCCATAGGAAGCTCAAAGACTCCCCAAATAAATTTGACCCAAAGAGGTCCTCTCCAAATGACATTATAGTCAGATAAGTAAAAGACAAACAAAGAATTTTTAAAACAGAAAAAGAAAAGCGTCAAGAGACATATAAAGAAATCCCAATTAGACTAACAGTAGATTTCTCAGCAGAAACCTTACAAGCCAGGAGAAAACGTAATGATAGATTCAAAGTACTGAAAGAAATAAAACAAGGAGAAAATAGTATAAAAAAAAACTGCCAGACAAAAATATTATACCAACCCAACTTATCTTTCAGAAATGAAAGAAAAATAAAGTTTTTTACAGAGAAGCAAAAACTGAGGGAATTCATCATCACTAAACTTACCTTAAAAAAAATGCTTAAAAGAGTGCTTAGGAAAATGATCCCAGATGGAAGCTCGGAAATGCAGGAAGGAATGAAGAGCAACAGAAAGAGTAAATATGCGGTAAATCTAAATGAATATTGACTGTATAAAATAATAATTATAATGTCTTGTGGTGTTTAAAATATATATAGAATTAAAATGTATGACAACAATAACTTAAAAGGGAGAGGAGAGGTAAATGGAGTTAAAATGTTCTAAGGTCCTTGCATTGTATGGGAAGTGATAAAAGTACTAATTTATATTAGACTTTAATAAGTCAAGGATGCATGTTTTAATTTCTAGGGTAATCACTAAAAGAATAATAAAAGAATGTATAACTAACAAGCTAATAGAGGGAAAATAGTAAAATAATTAAAACTAAGATCATTGAACTAATAACCAAAAAGAGAAAAAAAAACATAGAACAAATGGGACAAATGAATAACAAATAGTAAGCGAGTTCAAATTCACAAGGACAACCTATCAATAATAACTTTGAATATAAATAGATTAAATTCTACAATTAAAAAATATAAACTGGCAAAATGGAAAAAAAATACCCATGACACCGTATGCTTTATAAGGGAGATCCACCTAAATTTTAAAGACACATATAGACTAAAAGTATAAAAAAAAGAAGACTATACCATGCAAATGATACAAAGCAAATGGAAAGCAAAAAAAGCAGCGGTAGTTATACTTATATCTGAAAAAACAGACTTTAAGGCAGAAAATGTTATAAGAGACAAAAAAGGGAATAATTTAAATATAATGATTAAAAACTTAATTGGTATCCATAAAGAAAATATAACAATTCTAAATATTTATGGGACTTACACACCAAACACATTAATACAGAAATATATAAAAAAAATAATAAAAAAAATAAAAAGAGAAATAGATAAATACATAAAAATGGTTGGAAATTTTAATACTCCATTAACCATAATTAACAGACAAACAAAAAAAAAAATTAATAAGGAACTATTGGATATAAAACTAAAAAAGGAAAAAATTGACATAACTGACATATATAGAACATTTTATCTAACAACAACAAAATTTAAAATACTTAAAAATGCAAATAATATATTAAAGTACATAGAAAATATTTTAGGTCATAAATCAATACTGAATAAATGTAAAAAAACAAAATTAATAAAAAATATGTTCTGTGACCACAGTGGAATAAAACTAGAAATAAATATGAAAAAGATAATTAAAAAATCCACAAAAATTTGGAAAATAAACAAAATTATTATTAAAAACAAATTAGGTAAAAAAAAAATTAAAATGGAAATTATAAAATATTTTGAATTGAATGAGAATAAAAATATAACATATAAATACATTAAAAAAGATAAAAAACTAAAAATAAATAACTTAATAATAAACTTTAAAGAGTTAAAAAATCAAAATAAAAAAAAAAAAAAAATAATAAGAAAAAAAAAAATAACTAAAATAAAAATTAAAATAAATGAAATAAAAAATAAAAAAACAATAAAAAAATTAAAAAAAACTAAAAGTAGATTTTTTAAAAAAATAAATAAAATTGATAAAACTTAGAAAATAAAAATTAGTAATGAAACAAGAAATATTGAAAAAAATACCATAGAAATAAAAGACAAGACAAATATTACAGACATGCAAAGGTTCATAATGGAAAACTATGAACAATTATTTGCCAATAAATTAGATAACTTAGATAAAATGCATAAATTACTAGAAAAATATTATACAAAAACATTAATTCATACAAAAAAAATAGAAAAAATTAATAAAAATATAAAAAATCATATAAATAAAAAAAAAATTAAAATAATAATTAAAAACCTAATACAAAAAAAAATTATAGAAACAAATAGTTTTATCAGCAAATTTACACAAAATTTTAAAGAAAAACTAATACCAATCTTACATAAAATCTTCCAAAAAATAGAAAAAGAAAAAATATTTTCTAATATATTTTATGAAGCTAATATAACCTTAATAACAAAAAATTCTAACAAGGAAATTATAAAAAAGGAAAATTATAGACCAATATCTCTAATAAATATAGATGCAAAAATCTTAAATAAAATAATAGAAAATAGAATGAAAGAAAATATAAAAAAGATAATCCATCATAACCAAGTAGAATTTATTCCAGGAATGCAAGATTGGTTTAACATATATAAAGCAAATAATATAATACATCACATTAACAGAATAAAAGAAAAAAATATAACAATTATCTCAATAGATGCAGAAAAAGCATTTGACAAAATTCAACATTCCTTTATATTTGAAAAAAATCTTAAAAAACTAAGAATAAAAGGAAATTTTCTTAATATAATAAAGAGTATCTTTAAAAAAAACTTATCTACTACAGCTAATAAAATAATAATTAATGGTGAAACATTGAAAGCATTCCTTCTGAGAACTGAAATAAGACTACTAGCCACTATCTCTCCAATTATATTCAATTTTCTTTTTGTTGTAGCAGCCAAAATAATCAGTAAAGAAAAAAAAATAAAGTATATACGGATTGTAAAGGAAGAAGTAAAACTTTCATTATTTACAGATGACATAATTATGTATACAGAAATATCAAAAAAATTAACTAATAAGTTATTAGAACTAATAAGTAAATTTAGCAAGGTTGCTAGATATAAGGTCAATATATAAAAATCAATTGTATTTCTATAAACCAGTAGAAAAAAAACAATAAAACTAATAAAAAAAACTATATCATTTACAATAACAATAAACAAAATAAAAAGAAAAAGAAAAAGAAAAGAAAAGAAAAAAAAATACAAAGGAATAGAATTAACAAAGGATGTACAAGATCTCTACAAGGAAAACTACAAAACATTGAAAGTAAATAACACATACAAAAATAAAGACATACCCAGTGATTATAGAATAGGAAGATTCAATATTCTAAAAATATTAATTCTTCCTAAATTAATCTATAGATTCAAAATAATTATTCCATTTGAGATATTATTAAATGATATCACACAATTTGATAAAAATATTTTAAATTTCACATGGAATCAAAAAAGTAACAATATACAAAACAATATTGTAAATAAAGAAGAAAAAGATGGAAGAATCACTTTACTAGAAATCAAGTTATATTACAATGCCACAATAATTAAAACAATGAGTTACTGGTATAAAAATAGAAAAATAGACCAATGGAACAGAATAGAGTCCAAAAAGAGAACTATACGTATACTCTATATGACATATAATATTTATAACCATCTGATCTTGGACAAAACGGACAAAAACATAAATTGGGGATAGAATACCTTGGTAAAAAAATGGTTCTTAAAAAATGGTCCTGCCACAATTAGATAAACATATCTAAAAACTAATCTTTGACCTTATACCAAAATACACACAACATTTAATTTAGATTTAAAATTAAGACCTAAAACTATAAAAATCATAGAAATAAAAGTTACTGGAGATAACCTAGGAAAAACCCTTCAGGGTATTGGTATAGGCAAGGATTTCATTAATAAGAAACAAAAAGCAATAACAATAAACCACAAAAAAAAAATAGATAAATAGATCCTAATGAAAATAAAAAACTTCTGCACAGCAAAAGGAACTGTCAGCAGAACATACAAGTTACAAAGAGAATAAAAGAATTTTATATATTTATATCTAAGGCACAGAATACATACATAAAAGATTCAAAACCAGAAATCAATAATTAATAAGAAACACAATAGTTTATATAAAAATAGGTTAAAGATCTGAAAAGGCAATTCACAAAAGAAAATATACAAATGGTCAAGAAAACTATAAAAACGTGTTCAATTTTATTAATGTTCAGGGAATTTCAAATAAAAACCACAATTAAATATCATATTTTGCCATCAAGAATGGCAATAATGAAAAAAACAGAAAACAGTAAGTGTTGATAAGGACGGTGTGAAATGAGAATTCTAATACACTGTTGGTGGGAATGTAAATTGGTACAACCACTTTGGAAAACAGTGTGGATGTTCCTCATAGAGCTGAAGGTATAACTAACCTTTGATCCATCAATCAGACTACTAGATATACATATACTAGAAATCTATGTAAAAGTACAGAAAAAATCATTAGAAAGAATAGACATTTGCGCATGCAGGTTTATAGCAGCAAGATTCATAATTGCTAAATTAATAGTTAAAAATCCATTTGTTGGATGGAACCAACACAAATGCCCATCAATCTTAGAAAAAATTCAAAAACAGGCAAAATTAATCTATGGTGATAGAAGTCAGGATAGTAGTTACCCTTGGTGAGGGGAGGGTAGTGACTATGAAGGGGGCAGGGGGGGAGTCTTGGGTTCCGGTAATGGTTTTATTTCTTGATCTAAGTGGTGGTTACATGGGTGTATTCACTTTGTGAAAATTCATCAAGCTGTACACTTATGATTTGTGCACTTTTCTGTGTATGTTTTATTTCTATAAAAAAT,ORF1 and ORF2 replaced with MACSE reconstructions,L1ME3A.ORF1.hs1_chimp.marg,L1ME3A.ORF2.hs2_gorilla.marg,1033,1963,2410,6177,6416,239
L1MC5,TGTGCAGAAAGCAACATAAAGACACAAGAAACATGAAAAAGCAGGGTAATATGACAACCCCAAAAGATAACACCAGTTCACCAGCAATGGATACATATCAAGAAAAAGAAATCTCCAATTTACCAGAAAAAGAATTCAGAAGGTTAGTTATAAAGAAATTCAAGGAGGTACCAGAGGAAGGCGAAGCCCAATATAAGGAACTCCAAAAAACATTAAAAGAAGATAAGGATGAAATATTCACCAGAATAACCAATGTAGAGAAGGAAATAGATAGCTTAATGAAAAAAAAATCAAAACTACAAGAAACACTGGACACACTTATAGAAATGCAAAATACTTTGGAAAGCCTCAGCAATAGAATTGAACAAGTAGAAGAAAGAATTTCAGAGCTCGAAGACAAAGTCTTTGAAATAATCCAATCAAACAAAGACAAAGAAAAAAGAATAAGAAAAAATGAACAAAGCCTCCAAGAAAGCTGGGACTATGTTAAACGACCAAATCTACAAATAATTGGTGTTCCTGAGGATGATGAGAGATTTCTGAAAGGTTTGGAAAACATATTTGAGGAGGGAATAATGGAGGAAAACTTCCCTAGCCTAGCAAGAGACCTAATCATTCAAATACAGGAAGCACAGAGAACACCAGGAAAATACATCTCAAAAAGATCATCACCTAGGCACATTATCATCAGATTATCCAAAGTTCAAATGAAGGAAAAAATCTTAAGAGCAGTGAGAGAGAAGCATCAGGTAACCTATAAAGGAAAACCCATCAGACTAACAGCAGATTTCTCAGCAGAAACCCTACAAGCCAGAAGAGATTGGGGCCCTATATTCAATATCCTCAAAGAAAACAATTTTCAGCCAAGAATTTTATATCCAGCAAAACTAAGCTTCATAAATGAAGGAGAAATAAAGTCTTTCCCAGAAAAGCCGAATCTGAGGGAATTCATCACCACTAGTCCCACAAGAACTGCTCAAGGAAGCCCTAACTTGGAAGTGAAAAGAAACAACCGACATTCACCATTATGGAAACACACAAAAGTAGAAACAATTCCCAACTCATAAATAAGCCTATAAGAACCGAGACTTCCTTGACATGAAAGGATATTTCAAATGAATGCAATGGTACCTCACATCTCAATAATAACATTGAATGTAAATGGCCTAAATTCTCCAATTAAAAGACACAGAGTGGCAGAATGGATAAAAAAATACAGACCAATGAAATCGATCTGCTGCCTTCAGGAAACGCACCTTACCCATAAAGACACACATAGACTGAAAGTAAAGGGGTGGAAAATGATATTCCATGCAAATGGATACCAAAAAAAAGCAGGAGTCGCTATACTTATATCAGACAAAACAAACTTTAAGGCAACAAAGATAAAAAGAGACAAAGAAGGTCATTATATAATGGTAAAGGGATCAATTCAACAAGAAGATATAACAATCTTAAATATACATGCACCCAACACTGGAGCACCCAGATTTATAAAGCAAGTACTAATAGACCTAAAAAATGAGATAGACCCCAATACAATAATAGTTGGAGACTTCAACACCACACTGTCAGCATTGGACAGATCATTTAGACAGAAAATCAACAAAGAAACATAGGATTTAAACAGAATTTTGGACCAAATGGACTTAATAGACATGTACAGAACATTTCATCAGACAGCTGCGGAATACACATTTTTTTCATCAGCACATGGAAGTTTCTCCAAGATAGACCATATGTTAGGTCACAAAACAAGTCTCAACAAATGTAAAAAAATTAAAATTATATCAAGCATCTTCTCAGACCACAGTGGAATAAAACTAGAAATCAATACTAAAAGAAATTTTCAAAACCATACAAATACATAGAAATTAAATAAAATGCTCCTGAATGACCAGTGGGTCAATAATGAAATTAAGAAGGAAATTTAAAAATTTCTTGAAACCAATGACAATAGAAACACAACATATCAAAACCTCTGGGATACAGCAAAAGCAGTACTCAGAGGTAAGTTTATAGCTCTAAATGCCTACAAAAGAAAGGAGGAAAAAGTTCAAATTGACAATCTAATGTCACATCTTAAAGAACTAGAAAAGCAAGAACAAACCAAATCCAAAATTAGTAGAAGGAAAGAAATAACAAAGATCAGAGCAGAAATAAATGAAATTGAAACAAAAAAAACAATACAAAAAATCAATGAAACAAAAAGGTGGTTTTTTGAAAAGATAAACAAAATTGACAGACCACTAGCAAGATTAACAAAGAAAAAAAGAAAGAATAATCAAATAAATATAATCAAAAATCAAAAAGGAGACATTACAACTGATACCACAGAAATACAAAGGATTATTAGAGACTACTATGAACAACTATACACAAATAAATTAGAAAATCTAGAAGAAATGGATAAATTCCTGGACAAATACAACCTACCAAGATTAAATCATGAAGAAATAGAAACCCTGAACAGATCAATAACAAGTAATGAGATTGAAGCAGTAATTAAAAACCTTCCAACAAAGAAAAGCCCAGGACCTGATGGATTCACAGCAAAATACTCTCAAACATTTAAAGAAGAGCTAGTACCAATCCTTCTCAAACTATTCTAAAAAATAGAGAAAGAGGGAATCCTCCCTAACTCATTCTATAAGGCTAGCATTACCCTGATACCAAAACCAGATAAAGACATAACAAAAAAAAACTATAGACCAATATCCCTGATGAACATTGATGCAAAAATCCTTAACAAAATACTAGCAAACTGAATCCAGCAACACATCAAAAAGATTATTCACCATGATCAAGTGGGATTCATCCCAGGGATGCAAGGATGGTTCAACATACGCAAATCAATAAACGTGATATAGCACATAAACAGAATGAAGAACAAAAATCATATGATCATCTCAATAGATGCAGAAAAAGCATTTGACAAAATTCAACATCCCTTTATGATACTAAAAACTAAAAAATCTATTTATGACACACCCATAGCCAACATAATTCTGAATAATCAAAAACTGGAAGCATTCCCTCTAAGAACTGGAACAAGACAAGGATGCCCACTGTCACCACTCCTATTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCCCAATAGGAGAAAAGGAAGTCAAATTATCCCTGTTTGCAGATAATATGATTTTATATTTAGAAAACCCTAAAGACTCCACCAAAAAACTCTTAAAACTGATAAACAAATTCAGCAAAGTTTCAGGATACAAAATTAACGTACAAAAATCAGTAGCATTTCTATACACCAATAGTGAACAAACAGAGAACCAAATCAAAAGCAAACCCATTTTTAAAAGCGCTACAAATGTAAATAAAATAATATACCTAGGAATAAACCTTACCAAGGAAGTGAAAGACCTCTACAAGGAGAACTACAGAACACTGGTGAAAAAAATAAGAGAGGATACAAACAATTGGAAAGACATCCCATGCTCATGGATAGGAAAAATCAATATTGGAAAAATGACCATACTGCCAAAAGTAATCTATAGATTCAATGTAATCCCCATCAAAATACCAAGACCTTTCTTCACAGAATTTGAAAAAACAGTTTTAAAATCTACATATGGAACCAAAAAAAGAGCCCTCATTGCCAAAGCAATACTAAGCAAAAAGAACAAATCTGGAGGCATCACCTACCTTACTTTAAAACTATACTTAAAAAACTTAGATAACAAAAACGCGTGGTACTGGTATAAAAATAGATACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAATCCATATATGTACAGCCAACTGATTTTTGACAAAGCCAACAAAAACATTAAGTAGGGAAAGGATGCCCTTTTGAGCAAACGATGCTGGGATAATTGGCTGGCCACATGTAGGGATATGCATATGCAGAAAGAACAGGATCCTCATCTCTCACTTTATACAAAAATCAACTCAAGAGGGATTAATAATAAAGACTTATATCTAAGACCTGAAACTATAAAAGTTCTAGAAAAGAAAACCATTGGAAAACCCCTTGTAGACATTGGCTTAGTCAAGGATTTCACGAGCAAGAACCCAAAAGCAAATGCAATAAAAACAAAGATAAATAGCTGGGACTTAATTAAACTAAAGAGCTTTTGCACGGTAAAAGGAACAGTCAGCAGAGTAAACAGATACCCTACAGAATGGGAGAAAATCTTCACAATCTATACATCTGACAAAGGACTAATATCCAGAATCTACCACAAAGACTTGAACAACCTCAAATCAGTAAGAAAAAAAAATCCCATCAAAAAGTGGGCTAAGGATATGAATAGACAGTTCTCAAAAGAAGATATACAAATGGCCAACAAACATGAAAAAATGCTCAAATCTCTAATGGTCAGGGAAATGGAAATCAAAACCACAATGTAATACCACCTTACTCCTGCAAGAATGGCCGTAATAAAAAAAAAAAATCAACAAACAGTAGATGTTGGCATGGATGTGGTGAACAGGGAATGAAACATTTCTGGTGGGAATGTAAACTAGTGCAGCCACTATGGAAAACAGTGTGGAGACTCCTTAAAGAACTAAAAGTAGAGCTACCATTTGATCCAGCAATCCCACTACTTGGTATCTACCCAGAGGAAAAGAAATCATTATACGAAGAAGATACTTGCACACGCATGTTTGTAGCAGCACAGTTCACAATTGCAAAATCATGGGACCAACCCAAATGCCATCAATCAATGAAAGTGGATAAAGAAACTATAGTATATTTATACAATGGAATACTAAAGTTGGCCATAAAAAGAAATGAATTAACATCATTTGCAGTGACCTGGATGAGACTGGAGACTATTATTCTAAGTGAAGTAACTCAGGAATGGAAAACCAAACATCGTATGTTCTCACTGATATGTGGGAGCGGAATATCTCTATATATACTATGGAGTGATATTCTTCAGGATATATGTTTGTTGAGTGAAAAAAAGCGAGTAGGAAAGAGTTGTTATTTCATACTACCATTCATCTAAAAGATGAAAGAAAGAAGATGGATGTGTTAATATACAGAAAAATTTGCTTATATTTATAAAAAATCAAAGAAAAAATAAACCATAAAATTTTTTTAAATGATTACCTATAGAGGAAGCCAGAGGGAATAGAGTGGAGGGGAAGGGGATAAAAGCTAGACTTCTTTGAATATATCTTGTTATGTAGAATTTGACTTTGGAACCATGAAAATATTTTACATAATTATAAAACAAAATTAAACAAATTTAAAAAAGCAATCCCTAAAAATAGAAATAAAATAAAACAAATGAACCTAACTATGTATCCAGTTGGTGGTATAACCACACAGAGAGGAACTATTCCAAGTGACTTTAAAGCACAGTAATTTGAACTGTATATCCCTAGTGGGATATATCCTAAGGACAAAAACAACTACCTGAAAAAACAAATTCTAAACTGGTTTCAGTAATCATATTGTTGGTGGTAGTGTTGGTATTGTTATTCTGAGACTGTTGTGTGTGTATTGTGGGATAAAGTAAATGAGTAATTATGTTGGTGTTATTGAGAACTGGGACTTTTAGTGTGGGTGAAAGGAGATACAGATGTAAGATAGATGAGGTTAAGTAAAAACCCTGTAGTCCTGAATTTGAATTGGAAGTATCAGTATGAACTCATGAAGTATATATATAAATTTATGTATTTAAATATATATATATCTATTTCCTAGCTCTGTCCACTGAAAAGGCCTAGAAACAATGACCAACCCAGTAGCAATGAGCATCCCTAGCACCCAGATTGTAGTCTCTAAATACCATTTCCCACTAAAAGAAACCAGGGCTCCTTGGAGAAATGGCTGATTCCAGGTCTGGGGCAGGAAATGTACAAGATGAGCCTGGAACATCTTGTCATACCAGAAAGCAAGGACGCTATCAAAGAACTACTAGGGTCATGTCAAAAGGACTCAGGAGCCAACTTGAAGAGGCTCCCACTGGCCAAAGATGGGAAAATTTGAGCATCAATAAGGATAATAACTGCAATGGATTGAAACACATCAAATATGTTTAAATCCATGAGTTCATAATAATACAAAAAAACACTAATTGGTCACTTTTGGAGGATGCTAGGGAACCAACTCATTATTTTGAAAACTGGTAAAGCATTTTTAAATGGATACTAAAGGGAAAGAATCAAGCATTTATCCTGCCTTTCCTATATGAACTATTCCACCAGGTAACCAAATAGTTGATGAGAAGAAGTTTCTCTTTATAGAAGTATTCCAGCTAATAAATGAAAAAAGAATCATAGAATATTAGTATATCACCATTTTGCAACCCCTAATGAATTAATGGATCTAGGCATTGATCATCAATGGCTGCTAACATCACAAAAAGAGAGACAACCAGATATTATGTGCCTCCTGATGGAAGAACACAACACCACCTATGAAGTAGTCTTGCCAAAAAAATTAAACCTGAATCTGATCAAGCCTCTAGATCCAACTACCAATTTACAGGAAATACAGAGGACAGAGGAACATGTTAAACAACACCATGGGGATGCAATCAGCAAAATCCAGACTGTGGGGAATTCTACAGGACAAATGACCCAGTTTCTTCAACAAATAAATTGCAAGGAAAAGAAAGAGATGGAGGGAGAGAGAGAGAATCTATAGATTAAAAGAGACTTAAAAGACATGAACAACCCCAATATATGGACCTTATTTGGATCATGATTCAAGAAAATAAATTAAAAAATTGAGAAAAATTGCATTGACATTTACGGGATATTTGGTGATATTAACACTGATGCTTTGGTGATATTAGAGAAAAATTATTATTATTTTTTAGATGTGATAATGGTATTGTGGTTATATTTTTTTTTTAAAAAAATCTTATCTTTTAGAAATTCATACTGAAATATTTAAGGATGAAATGATATGATGTCTGGGATTTGCTTCAAAATAATATGGGGAGGGGAGGAAAGGATGAGTGGGGATATAGATGAAACAAGATTGGCCATGCATTGATAATTGTTGAAGCTGGGTAATGGGTATATGGGGGTTCATTATACTGTTCTCTCTACTTTTGTATATGTTTGAAATTTTTCATAATAAAAATTTAAAAA,ORF1 MACSE reconst added to beginning,L1MC5.ORF1.hs0_human.marg,L1MC5.ORF2.hs0_human.marg,0,1046,1116,4942,7151,2209
L1MC5A,TGGGGAAAAAACAGAGCAGAAAAGCTGGAAATTCTAAAAAGCAGAACGCCTCTCCTTCTCCAAAGGAACACAGTTCCTCACCAGCAATGCAACAAAAGTGGTTCTTAAAAGAGATTGACATTGACGAATTGACAGAAGTAGGCTTCAGAAGATGGATAATAAGAAAGTACATCAAGATACAGGAGAAAGTTGAAACCCAATGCAAAGAAATTAAAAAATTGAATAAAAATTTAGATGAATTTATAACTAAAATAACCATTTTAGAGAAGAACCAAAATGAACTTCTGAAACTGAAAGACACAGCTCGAGAAGTACATAATACAGTCAGAAACTTTAACAACAGACAAGACCAAGTAGAAGAAAGAATTTCAGAGATCGAAGATAAAACTTATAAAATAAAGCAAGAAGACAAGTTTAAAAAAAAAAGAATAAAAAGAAATGAACAAAGCCTCCATGAAATATGGGACTATGTGCTAAAAAGACCAAACCTACGTTTGATTGGTGTTCCTGAGAGAGAAAGGGAGAATGTAAAAAATTTAGAAAACATATTTAAGGATATAATCCATGAAAAGTTCCCTAATCTTGCAAGAGAGGTCGACATCCAAATTCAAGAAATACAGAGAATCCCACAGAGACTCCTATCAAAAATAGTCACTCCAAGGCAACTAATTATCAAATTCCCCAAAGTTAAAATGAAGGAAAAAATTTTAAGAGCAGTAAGAGAAAAGGGTCAGGTAACCTATAAAGGAAAACCTATCAGACTAACAGCAGATCTCTCAGCAGAAACCCTACAAACCAGAAGAGAATGGGGTGCTATCTTTAGTCTCCTTAAAGAAAAAAATTATCAGCCAAGAATTTTATATCCAGCAAAACTAAGCTTCATAAGTAAAGGAGAAATAAAGTCTTTTTCAGACAAGCAAATGCTGAGAGAATTTGTCACTACCAGACCTGCCCTACAAGAACTGCTAAAGGGAGTTCTAAATATGGAAATGAAAGACCGATACCAGCTACTACAAAAACATGATAAAAAGTCTCTTTATGAAACAAGTATAACATTTATACCTAATCCTGATAAAGAAAAAAAAAAGAGCATATCCCTTTTGCATATAAGAATAAATTACAAAATTAAAAAAAAAATAATAAAAAATAAATTTAAATAATATAAACAAAAAAATATGACAGGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAATGCCCCAATTAAAAGACACAGACTGGCAAAATGGATAAAGAGTCAAGACCCATCGGTGTGCTGTCTTCAAGAGACCCATCTCACATGCAGAGACACACATAGGCTCAAAATAAAGGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAAGCAGGGGTTGCAATTCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAAAGACAAAGAAGGGCATTACATAATGGTAAAGGGATCAATTCAACAAGAAGAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTTAGAGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGACAATATTAGACAGATCATCGAGACAGAAAATTAACAAAGATATTCAGGACTTGAACTCAGCTCTGGACCAAGTGGACCTAATAGACATCTACAGAACTCTCCACCCAAAAACAACAGAATATACATTCTTCTCATCAGCACATCGCACTTATTCTAAAATTGACCACATAATTGGAAGTAAAACAATCCTCAGCAAATGTAAAATAACAGAAATCATAACAAGCAGTCTCTCAGACCACAGTGCAATCAAATTAGAACTCAAGATTAAGAAACTCACTCAAAACCACACAACTACATGGAAATTGAACAACCTGCTCCTGAATGACTACTGGGTAAATAACGAAATTAAGGCAGAAATAAAGAAGTTCTTTGAAACCAATGAGAACAAAGACACAACGTACCAGAATCTCTGGGACACAGCTAAAGCAGTGTTTAGAGGGAAATTTATAGCACTAAATGCCCACATCAAAAAGCTAGAAAGATCTCAAATTAACAACCTAACATCACAATTAAAAGAACTAGAGAAGCAAGAGCAAACAAATTCAAAAGCTAGCAGAAGACAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATAATGAAATCAAGAAGTTGGTTTTTTGAAAAGATAAACAAAATTGATAGACCACTAGCTAGACTAATAAAGAAGAAAAGAGAGAAGAATCAAATAAACACAATAAGAAATGATAAAGGGGATATCACCACTGATCCCACAGAAATACAAACTACCATCAGAGAATACTATAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATAAATTCCTGGAAACATACACCCTCCCAAGACTAAACCAGGAAGAAATTGAATCCCTGAATAGACCAATAACAAGTTCTGAAATTGAGGCAGTAATTAATAGCCTACCAACCAAAAAAAGCCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAAGAAGAGCTGGTACCATTCCTTCTGAAACTATTCCAAACAATAGAAAAAGAGGGACTCCTCCCTAACTCATTTTATGAGGCCAGCATCATCCTGATACCAAAACCTGGCAGAGATACAAACAAAAAAGAAAATTTCAGGCCAATATCCCTGATGAACATCGATGCAAAAATCCTCAATAAAATACTGGCAAACCAAATCCAGCAGCACATCAAAAAGCTTATCCACCACGATCAAGTTGGCTTCATCCCTGGGATGCAAGGTTGGTTCAACATATGCAAATCAATAAATGTAATTCATCACATAAACAGAACTAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTTGACAAAATTCAACATCCCTTCATGATAAAAACTCTCAATAAACTAGGTATTGAAGGAACATACCTCAAAATAATAAGAGCCATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGAACAAGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGGGCAATCAGGCAAGAGAAAGAAATAAAGGGTATTCAAATAGGAAAAGAGGAAGTCAAATTATCCCTGTTTGCAGATGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAAAAATCACAAGCATTCCTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGGAATACAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAGAGAAGACACAAACAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATACTACCCAAAGTAATTTATAGATTCAATGCTATCCCCATCAAACTACCAATGACTTTCTTCACAGAACTGGAAAAAACTATTTTAAAATTCATATGGAACCAAAAAAGAGCCCACATAGCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACGTTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGACATATAGACCAATGGAACAGAATAGAGACCTCAGAAATAACATCACACATCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAACAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGCAGAAAACTGAAACTGGACCCCTTCCTTACACCTTATACAAAAATTAACTCAAGATGGATTAAAGACTTAAATGTAAGACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCAATACCATTCAGAACATAGGCATGGGCAAAGACTTCATGACAAAAACACCAAAAGCAATGGCAACAAAAGCAAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAGTGAACAGACAACCTACAGAATGGGAGAAAATTTTTGCAATCTATCCATCTGACAAAGGGCTAATATCCAGAATCTACAAAGAACTTAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGATACGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAACAAACATATGAAAAAATGCTCATCATCACTGGTCATTAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGAAAACAACAGATGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGTGATTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCGATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATTCTACTATAAAGACACATGCACATGTATGTTTATTGCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCATCAATGATAGACTGGATAAAGAAAATGTGGCACATATACTCCATGGAATACTATGCAGCCATACAAAAGGATAAGTTCATGTTCTTTGCAGGGACATGGATGAAACTGGAAACCATCATTCTCAGCAAACTAACACAAGAACAGAAAAGCAAACACCACATGTTCTCACTCATAAGTGGGAGTGTAAGAAAGAGGGAAGAAAATATACATAATTTATATATATTCAGCGGATATATACATGTACTTACATATGCATGTGTATATGTGTGTGTGTTTGCATAAAAAAATACAGGAAGGATAAACCAGAAACTAATGAAAATGGTTACCTATTTTATACATAGGAGGTGTGTGGGAACAGGATGGAAGGATAAAGATTGGAAGTGAACTTTCTTTGAGAGTTTTGACTTTGGAATCATGTAAATATTTTACATATATTCTATTAAAATAAAATTAAATTTAAATAACAATAAAGAATACAAAGCAAACCCTGAAATTGGAAAAGAAATTGAAACAAATGAATCTAACTGTATATCAAATTGGTAACATAACCGCACATATATGCAGAAAAAAATAGTTATTTTAAGTAATTTTTGAACACAGTATTATGACTGTAAATTCCCAGTGGGGTATAGCCTAAGGACAAAAAGAACTGCAAAGAAATCTTAAACTGCCTTCGTAAGTTTTATTGTTGGTAGTAGTATTGGTATTGTAATTCTGAAACTATTTTGTGTATATTATAGGACTGAATAAATAAGTAATTATATTAATGTTGTTAGGAACCAGGATTTTCAGTGTAGGAGAAAGGAGATGCAAATATAAAATCGAAGAAAATAAGGAAGAACCCTGTAATGTTGAATTTGAATTGGAAATATCAGTATAAACTCATGGAATTTTTTTTCTAAATAAACAAGTATGAATTTCCTAGCTCTGTCCACTGAAAAGGCCTAGAAGCAATGACAACTCAGTAGCAATGAGCACACCTAGAACCCAGATTTTGGTCTCTAAATGCCATTCCCCACTAAAAGAAACCAGGGCTCCTTGGAGAAATGGCTGATTCCAGGTCTGGGGCAGGGAATGTACAAGGTGAGCCTGGGACATCTTGTTATGCCAGAAAGCAAGGAAGCTCTCAAAGACTAATGGGGTCATGTCAAAAGGAGGCAGGAGCCGGCTTGAAGGGGCTCCCACTGGCCAAATATGGGACAATTTGAGCATCAGAAAGAATAATGATTGCAATGGATTAGAACACATTAAATATATTAAAATCCACAAGTCCTTTAAAAAATGATAAAATTAAAGTAAAATGAGAAGACTACAAAAATAATGCCTTTGTCAACTTTGAAGTTTTCAAAGAGACCAACTCATTACTCTGAAAATTGGCAGTTAAAGGGAAATAATTAAGCCTTTCTGTAATATTTTATCTTGCCTTTCTTGTACGATTTGTATTTCGAGATAACAAGATTGATAAAGGAAAGTTTTTCTTTATTGAAGAATTTCAGCTAATAAATGTAGAAGGAATGATAGAATTAGAAAATCACCATTTTGCAACCCCTAATGAAATAATGGATTTAGGCAATGATCATCAATGGGTGGTAATACAAAAAAGCTACAGGTGAAAGCTATTGGGGAATGGGATATTCACATGGTCTCATTAAATAAATTACTTACAGATGACATATTTATCTATAAGTTGAAAGCAGAAAAGGAGCCTTTACAATAGAGAAATCGGGCAGACACCACCTAAACCAAATCCAAGTGATAAAAGAAAATGACTGCCTCACTAGTTCTTGCTCCTGAACCTTCGACGCCAGTGTAGGATCATCACTAAAAGTGGAACAAACTGATATTCTTGACCTCCTGATGTGATGCAATGGGAAGTACACAGCACCACCTATGAAGTATTCTTCTTATAAAACCAAAAATATCTAACCTGAATCTAATCAAGCCTTTAGATCTATAAGTTACAAGAAATAAGGAAAATCAATGAACTAAGTAAAAGAATAAACAACGCCACAAAGAAACAATCAGCCAAATTCAGAATGTGGGACATTCTACAGGACAATTGCCCTAGCTTTTTTATTATTCACCATTTACAAGTTAATGGCAAGAAAGAAAACACACAATAAAAACGAAAGATGGGAGGGACTGTTCTAGATTAAAAAAAATTAAAAAGAATTAAAAACTAACAATGAAGTGCAATGAGTGAACCTTGTTTGGATCCTGAATCAAACAAATAAACAACCATATACAAATGTTATAAAGGACATTATTAAGATAATTGGGAAAATTTGAATATGGACTGGTTATTAGATGATATTAATGTATTAATGTTTACTTCCTTGTGAGTAAGAATCGTATAATTTTTTGGATGTGATAACGGCATTGTGGTTATGTAGAAAAATGTCCTTGTTTTTTGGAGATACATGCTGAAGTATTTAGGGAAGAAGTGTCATGATATCTGAAACTTGTTTTCAAATGGTTCAGCAAGATGAAACAAAGAAAGAAAAAGAGCAAAAGCAAAAATGGCAAAATGTTAACAATTGGTGAATCTGGGTGATGGGTATATGGGTGTTCATTATGTTATTTTTTATATATTTTTTTGTATGTTTGAAAATTTTCATAATAAAAATTTTTAAAAAAAA,ORF1 MACSE reconst added to beginning,L1MC5a.ORF1.hs0_human.marg,L1MC5a.ORF2.hs3_orang.marg,0,1031,1176,5000,7456,2456
L1ME3B,TGGGGTAGAGAATAAAAGTTGGAGTCCAGACCCACTCAAGGGTGTGGGTTGCTGCCTGGTAAAACCTCCATGCCTGACACTGGGATCCCCAAGGTTTGCATCCTAGACATAAGGGTAAACTGAAATTATAACAGTCCTTGCAGACACTGTAGCCTAGCTTCAAGTCATCTGAATGGTCCAGAAAACTGTAATCCCTAAAACTGGATTAAAGTAATCCCAGATTGCTAGTGCTTTAGGACCTGGCAGAAAAAAAATGAAAATATTCTTTGGAGGAAAGTAACGTCATCCTAGGCCTCAAAATATTTTTACAAATAATTTTTCAAATACTATGTCTGACACACAATCAAAGGTAACCAGGCACAAAAGGAGACAAGACAATGTAAATGAAAACTAGTAAAAACAACAGAAAACAGAAACCCTCAATGACTCCAGATATTGTGGCTATCAGACAGACTTAAAATAACCATGCTGAAGGAGACAGGAAGACATAGTTGAATTAGCGGACTGGAAGTTAGGTCAGAAGAAAAATCCAGAATCAAGCAGGAAGAAACAAACAAAAATGGAAAAATTCATAAAAGAAGGTAAAAGAAGGCCGGGCACTGAGGCGGACAAGACGCCAATATAAAGACACCCCATCTAATACGAATACCAGGAAGGAGAGAGATCCTATAGAAGAAATATTGAAGAGATAATGGCAGAGCATTTTTAAAAACCAGTTAAAGATATTAACCTACTGATTTAAGAAAGCCTACAACCCCTAAGAAAGATAAATAAAAAGAAGTCTATACCTAGACACACAACTGCTAAAAACTAAAGGCGGGAAGAGAAAATCTTAAAAGCAGTCAGAAAAAAAAAATTACCTGCAAAAAATGGGGAGAAACCACAGCAGAAAGGCTGAAAATTCCAAAAACCAGAACGCCTCTTCTCCTCCAAAGGAAAACAACTCCTCGCCAGCAAGGGAACAAAATTAAGATGGAGAATGAGTTTGATGAGTTGACAGAAGTAGGCTTCAGAAGGTCAGTAATAACGAACTTCTCTGAGCTAAAGGAGCATGTTCTAACCCGTCGCAAGGAAGTTAAATCCTTGAAAAACAGGTTAGACGAACGGCTAACTAGAATAGCCAGTGTAGAGAAGAACTTAAATGACCTGATGGAGCTGAAAACCACAGTACGAGAATTTAGTGAAGCATACACAAACTTCAATAGCCAATTCGATCAACCGGAAGAAAGGATATCAGTGATTGAAGATGAACTCAATGAAATAAAACAAGGAGACAAGATTAGAGAAAAAGGAGTGAAAAGAAATGAACAAAGCCTCCAACATACATATAATTGGGTGAACAGGCCAAATCTACAGTTGATTGGTGTACCGGAAAATGACCGGGAGAATGGAACCAAGTTAGAAAACACTCTTCAGGATATTATCCAGGAGAACCATCCCAGAAAAAGAGGAAAGGAAAACATAAAAATAGAATCAACATACAGAATAGTGCAAAAAATTTTTTTGAATATAAGTAAAAGACACCAAGCTACACATTTGGCAAGCATATTCGAGAAAGAAAAAAATGTTAAGGGTAGCCAGAGAGAAAGGTCAGGTTTCAAACTAACAGGCAGGTTCAAGAAATTCACACTTAGAAATATGATAATAAAAGTACAGAAAACCAAAGACAAAGAAAAAGTAGTCAAACTAACCAGAAAAAAAGAGTTTCAATCCAGAATAGTCTACAAAGAGTAACTTACATTCGTAAGTCACTTCTATATGAAAAATGGAAGCCAAAGACAGTGGTATGACACATTCCTAGTGGTGAAAGAAGCCTCACAGGAGCTCCTGAAGGAAGCACCAAACATGGATAGGAACAACTGGTACCAGCCACTGCAAAAGCATGCCAAATTGGGGCAGACAGAAAATGACCCCAGAAGAAAAGTTAGAGATGCAGGAAAAAATAAAAGGCAATGAAAAGTGAGTATAAATGAATACTGACCGCATAAAACATAATAATGATGTGTTGGATTTAAAATTACAGATAATTAAAATACACAACAACAACAGCAACTAAATAATATCATAGCTAAAGCATATTAAAGTCCCTGAATTATCTGGGAAAAAAATAAAAGTACCAATTAACAGACTTTGATAGATCAAAAATCTATGTTGTAATCTTTAGGTTAATTACTAAAAGAATAGTAATACAGGAATATATATCTTCTAAACTAAAAGAAAAAAAAAATGGAATAATAAAAAGTAGTTTAACAAAGCAAAAAATGACAAAAAAGGCAGGAAAAGTGAGAAAAAGGAACATATATCAGCTGGGACAAATAAAAAGCACATAGTAAAATAGTGGATTTTTTATCCAAATATATCAGTAATTATAATAAATGCAAAGAGATTAAATGCTCCAGTTAATAATCAAAGATTGTCAGACTGGATTTTTATTAAAACAACTATCTGTTGTTTACAAAAGACATGCCTAAAACACAAGGATACAGAAAGTTTGAAAATAAAAGAATGGACCAAGGTATTCCATGGAAACAGTAAACTAAAGAAAGCTGGTGAGGCTATATTAATAAAGACTAAAATAAACTTTAAGGCAAAAAAAGTATTAGTAGAGTTAAAAACAGGGACACTTCGTAATGATAAATGTTTTAGTTTAATAAAAGATGAAATAATAATTCTAAATTTCTGTGCATTTAAAAACATGGCCTCAAAATATATACTTTAAAAAGTGACAAAAATAATAGGAGAACTGGATAAATCCACAACCATAGTGGGCAATTTTAACACATCTTTCTCAGTAACTGATAGAACAAGCACACAAAAAATTAGTAAGATTCAGCATGATCTGGACAAACTTGACAACCTAATTGACATGTATAGAACCCGGCACTCAACAACTCCAGAATGCACATTCTTTTCAAGTGCACATGAAGCATTTACCAAAATTGATTATATGCTGGGCAATAAATCAAGTCTCAATAAACTTCAAAGGACTGAAGTAAAATATAGTGTATGTTCTCTGACCACAATGAAACTTAAGCTAGAAACCAATAATAAAAAGGTAACTAGAAAATCCCTAAATGTTTGGAAATTAAGCAATACACTTCTAAATAACTTCCGTGGGTCAAAGAAGAAATTAGCAATGGAAATAAGAAATTAATTTTACCTGAATGATAATGTAAAATATGACGTATTGAAACGTGTGATGCAGCTAAAATCATGCGTAGGGAGAAATGTGTATAGCATTAAATGTATATATTTGGAAAGAAGAAAGGCTGAAAATCAAGCCAATCAATCCATCTTAATAAGTAGGAAAATAGAAAAAATAACGCAAATTAAACCCAAGGAATGCAGAAGGAAGAATATACAAAAGTTAAGAGCAGAAATTAATGAAATAGGAGCAATAATGTATGAGAGAAAATCAACCAAACAAAAAATTATTTCCTTAAAACAACGAAAAATGATAAAATTAATAAACATCTTGGCAAGACCGATCACAAAGAAGAAGGCAAGAGAAGGCACAAATAAGCAATATAGCAATATAAGGAATGAAAAAGAGGACAAAGGAACAAATATTACAGACATTAAAAAGATAATAAAAGGATATAATGAACTAGTTTATGCCAATAAACAATTTGACAACTTGGTTAAAATTGACAAATTCATAATTGACACAGAAAAAAACATTACCAAAAGTGACACAGAAGAAATAAAAAATCTGAATAGTCCTATAGCTATAAAAGAAATTAGATGCATCCATAAAGAAAAACTTCCCATAAAGAAAACTTCAGGCCCAGATGGCTTCATCAGCAAAGTTCCAAATTATTTTAAAAGAAAAAAACTAACACCACTCTTACATAAATTCTTCATACTTCGGGAGAATAGAAAGAAGAAAAACTTTCCAATTCATTTCATGATAAAAAAAAACTTGATACCAAAATACCCTACAAATTCTTTACAAAAAAGAAAAATTACAGGTCAATCTTGCTCTCATAAACATAAATGCAAAAATCCTAGGTAAAATATTAAAAATTCTATCCAGCAAAATATTAAAAAATTAAATCCAGTGATATATAAAAAGGATTCATTCCAGGAATGCAATACAGGATTGATTATATTAAATGCGATAACTCAATTTTGCATTCAAAAATCAATCAGTGTAATTCATGTCATTAACAAAATACAGGAGAAAAATTGTACTATTATCTCCTTAATAGGCATAGAAAAATAATCTGATAAAATAATTCAACATCCGTTAAAATACTACTACTACTATAATAATAATAAACTTCTTAGAAAACTAAGATGGAAGAGAATAGAAGGATCTTTAATCAGACAAAAGGTGTGTACACAAACTTATATAAAACATCACATACTTAATGGTGAAATAATTGAATGTTTTCCTTCAGGAACTAAAAATGAGACAAGTATGCCTACTATTACCATTTCTATTCAACATTGTACAGAAGATTCTAGGCAGCTAAAAAAAGCAATAAAAGAATTTTAAAAGAAAAATAAGATAAAAGGTAAATGGATTGGAACTATCATTATTAAAACTGAAATTATTGATATAAATATAAATGTACAAAAAACACGATTGTATACAAATAAACTATTAGCATTAATAAATAAATTTAGCAATGATTTGCAGGATATAAAACACTGGCTATCAGGTCAATATCATTTCCACATAGTAAAAATAAATTATATCTTTCTATTCCAGGACCAAAGAATTAGAAAATTAATTTTAAAAATTATGTCATTTACAATAACATCAAAAGATGAAATTCCTAGGAATAAAATTCATATCAAATACGTAAATCTCTACGGAGAACTAGTAATACTAAATAAAAGGATTCGAAAAACCACCACAATGAAAACCTCAATAATTGGAGGGATATGGAAGACTGACTATGTTTATGAAATAAATAACTCACATAAATTGTTATTTAAGGATTCAATTCTATGCAAATGCACCTATAAAAATTTCAATGTAGTCCCATTCAAAATCCCAGCAGCTGTTCTGGTAGAACTTGACAAGCTGATTCTAAAATTTATATGGAATTGCAAAGGGCCAAGAATAGCCAAGACAATCTTGAAGAAGAAGAAGAAAGTAGTTTTGTTCGGAGAACTTACTTGACTGGATATCAAGCTTTATTTTAAGTTAAGTAATTACAAAAAGATGCTACGTTGTATTAGCTCAAGGATAAATCCCCCTCCCCAAAAAAAAAAAAAAAAAGCAAATGGAATAGAACAGAGCTTAGAAACAGACTTACCACATATATATGGACACTTTATTTATATCAAAGAGGTGACATTGCAGCAAAATGAAAAAAGGTTGTGTTTTTCAATAAATGGTGCTGGGCCAATTAGATATCCATTTAAGGTAGAGATGGGAAAAAAAAAAATTGAAACCCTAATCTCCTTCCCACTGGATTATATATAAACAGAGAAAAATCAGTTCCAGGTGGATTGTAGATCTAAATGCGTAAAAAGTAAAAGCATATTCTGGAAAGAAATTACATATGAGAGTATCCCCATAACCTTGAAGTCAATGGGGAGAGAAAGAGCTCTTAAACAAAACAAAACAAAACGTCTGAACCATAAAATAAAGGAATCCAATATTGATAAATTGGACTACATTAACATTAGGATCTTCTGTAAATCATCAAAAGATACCCTAAAGAGTTGGAAAGACAGTCTCAGAGTGAAAATTATTTGCAGAAGATACATATTCGGAACTAGCAAAGAACTCATATTTATAATATATACCAGCAAATTAGAAAGATATCCTCATATCAATAAGAAATTTTTAAAAAAAGACAAACGAATAAGAATAAAGTGGAAACAAGACCTGAAATGGAACTTCACAAAAGAGGATATTCAATGACCTCTAAAACATATGAAGAGCTGTTTAAGCCAATTTAGTAGTCAAGGATGATTTAAATTAAAAACCACAATGAGATACCACTATACACCTTGGCATTCAACAAAAACTTTGACAATATCAAGTGTTGGTGAGAACATGAAGAATACAAATTATACAAGGTGTAGTCAAGGGTGTGAAATCACTGGAACACTCATACACCCCTGGTGGGAAAATAAATTGATACCATTACTTTGGAAAAGTTTGGAAATAACTATTAAAATTAAATATACATATAATGCCCTTGAATCTAGAAATTCCATTCTAAGTATATACCTAACAGAAATGCATAAATACGTACACCATAAAACATGTGAGAGAATATTCATTGCAGCATTGTTTGTAATAGCCTCAAACTGGAAACAACCCAAATGTCCATCAACAGTAGAATAGATAAATAAATTATGGTATATTTTCATGCAATGGAATACTATACTACAGTGAAAATGAATAAACTGCAGCTACATGCAACAACATGGATAAAATCTCACAAACATACAGTTGAGCAAAAGAAGCCAGATACTAAAAAATAAATAGATACCTTTACACAAAATTAGTCCATTTATATAAAATTCAAAAACAGGCAAAACTAAATTATGGTGTTTAAGGAATGCACACTTAGGTGATAAAACTAAAAAAATAATTGTTTTAGAAATTAGAATAGTGTTTACCTTTAAGGAGAAGGAAGGTGCTGTAGGACAATGCATGAGGGCTCTGGGTTGCTGGTAATGTTCTATTTCTTGATCTGGGTGGTGGTTACACGGGTATTTACTTTTTAACTACTCATTAAACTGGACATTTATATTTTATGCAGTTTTTTAATTGTGTACTTTTTTGCAATTAAAAGTTTTAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1ME3B.ORF1.hs5_gmonkey.marg,L1ME3B.ORF2.hs7_bushaby.marg,870,1893,2353,6334,6775,441
L1MD3,GAACTTAAGATCATAAGAAATAAATTAATGGAAATGCTGGAAATAAAAGACACATTTAGAGAAATGCAAAACACATTGAAAAGTATCAAAAATAGAATCGAACAAGCAGAAAAAAAAGCTTCAGAGCTCAAAGACAAAGCCTTTGAATTAACCCAATCCAACAAAGACAAAGAAAAAAGAATTTTAAAAATGAACAAAGCCTCCAAGAAATGTGGGATTATGTTAAATAGACCAAACCTAAGAGTAATTGGTGTTCTTGAGGAAGAAGAGCAATCTAAAAGTATGCAAACTTATTTGAAAGGTAATAATCGAGTAAAAAACTTCCCTGGTCTTGCTAGAGATCTAAAGACATCCAAATATAAGAAACTCAAAGAACACCTGAGAAATTCATCACAAAAACATAATAACCTAACCACAAAGTCAGCAGATAATCTTTAAGTCAAAACGAAGGAAAACATCTTAGGAGCTGTGAATCAAAAGCATCGGGTATCCTATAAAAGAAAACCTATCAGATTAACAGCAGATTTCTCAGCAGAAACCATGCAAGTCAGGAAGCATTGGAACATTATCCAGCCAAGAATTCTGTATCCAGCAAAACTAAGCTTCATAAATGAAGGAGAGATAAAGCCTTTTTCAGACAAACAACTGCTGAGAGAATTCACAACTACCAAGCCAACACTACAAGAACTGCTAAAAGGAGTCCTAAATATTGAAAAGCCTGTTTAGCAGAATAAGCATTCTTTTCAAGTGCACATGAATAGAATAGAAGACAGAAAAACAATAGAGAAAATCGACCATATCCTGGGTCATAAACAAAGTAAAAACAAATTTAAAAGAACTGAAATCATACAAAGTCGGTTCTTTGAACATAAACTAAAAATCAATAAACAGATAACAGGAAAATCTCCAAACACTTGGAAAATTGATAAAACACTTCTAAATAATTCATGGCTTCTAGGAAGACTGACAAAGAAAAAAACAAAATACTTTGAACTGAATGAAAATAAAAATATCAAAACGTATGGAATGCAGCTAAACCAGTGCTTAGAGACAAATTTTCAATATCAGACGGCTTTTAAAAAGAGCAAAATAAATGAAAGCAAGCAGAAGGAAAAAAGGGGCGAAAAATCAATGAAAATAAGGGATATCACTATAGATGGAAAATCAACGAAACCTACAACTAGTTCTTTGAGCAATAAAATTGATAAACCTCTCCTAGCGAGATTGACAATCTTAGGAATGAAAGAGATACCACTACGGACCCTCATTAAAAGGATAATAAGAAAATACTATGAACAATTCAATGCATAGAAATTTGACAACTTAGATGAAATGGACAAATTCCTTGAAAACCAAGAACTACCAAAACTTAAGCTAATAGATAACCTGAATAGCTCTTATTTGTTTAAAAAATTGAATTCTTGTTTAAAAAATTTGTGACAAAGAAATCTCCAGGCCCCTAAATGGTTCACTGGTGAAGTCTACCAAACATTTAAAGAAGAAATAATACCAATTCTACAACATCTCCTCCAGAAAATAGAAGAACAGGGAACACTTCCCAACTCATTTTATGAGGCCAGCAGAATTACCCTGATACCAAAACCAGACAAAGAAAGTAAAAGGAAAAGAGAACTACCTCAGAAACACGCGTGCAAACAAACCATATTCCACATGATCATAGATACAAAAATTCTCAATAAAATATTAGCAAATCAAATCTATCAAGATATGAATAACATACAAATTTACAAAGTGGGGTTTATTGTGGGATTGCAAGGCTGGTTCAATATTAGAAAATCAATCAATGTAATCCACCATATTAATAGTCTAAAGAAAAAAAAAAAAACAAACGACGAATTGATATCTATAGATGCACAGAAAAAAATTTTCCAAAATTTAACTTCCATTCATGATAAAAATTCTCTGCAAACTAGGAATAGAAGGGAACTTCCTCAACCTGATAAAGGCCATCTAAAGAATACCTACAGCAAACCTATATTTAATACAGTGCTTAATGGTGAAAGACTGAATGCTTTCGAATCCCTAAGATCGGGAACAAAACAAGGATGTCCGCTTTCAACACTTCTATTCTAACACATTGTACTAGAAATTCCATCCACTAGAATAAAAGCAACAAGAGAAGTATGATATATCGAAACAAATAAAAAACAAGAAAAACATGATTATCTACGTAGAAAATCCCAAGGAAATTACATTGAAAATCCAAAGGAATCTACAAAAAATCTCCTAGAAATAATAAGTGAATTTACAAGGTTGCAGGATACAAGATCAACATACAAAAATCAATTACATTTCTATATACTAAAGCAACGTGCAATCGGAAACCGAAATTTAAAAATTAAAAAAATTAAATTTACAATAGTTCCCAAAAATATGAAATACTTAGGTATAAATCTAACAAAAGATGTCCAGGTTCTATATGCCGAAAACTGCGATTACCTGATGTTAAGAAATCAAAGAAGACCTAAAAAATTGAGAGATACCGTGTTCATGAATCAGAAGAGTCAACGAGTAAAGATGTCGATTCTCCCCAATTTGATCAATAGATTTAATGCAATTCCAATCAAAATCCCAGCAGGATTTTTTTGTGGATATAGACAAGCTGATTCTAAAGTTTATATGGAAAGGCAAAGGAACATTAGAATAGCCAAAATAATTTTGAAAAAGCAGAATAAACTTGGAGGAATCACAGTGCTACCTGATTTTAAGACTTACTATAAAGCTACAATAATCAAGACAGTGTGGTATTGGCGAAGGGATAGACAATTATCAATAGATCAATGGAACAGAATAGAGAGTCCAGAAATAGACCCACACAAATATAGGCAAATGATTTTTGACAAAGGTGCAAAAACAATTCAATGGAATAAAGGAAGGATAGCCTTTTTACAGCAAATGGTGTTGGAACAATTGGACATCCATATGCAAAAAATGATTGACCTAAACCTCACTCCACCTAAATTTTATAGCTTACCATATAAAAATATTAACTCAAAATGAATCATAGATCTCAAAGTAAAATATAAAACTATAAAACTTTTAAAAGAAAACATAGGAACTTTTAGAAAAAAATGGGAAAATCTTCATGATCTGGGAATTAGGCAAAAAGTTCTTAGACATGACACCAAAAATATAATCCATCAAAAAAATGAAAAATTGATAAATTGGACTTCATCAAATTATAAACTTCGTTGCTCTCCCACTGTTAAGAAAATGAAAAGACACACTGCATGCTGGGAGAAGATATTTGCAAAGCACATATCTGATAAGGGATTAGTATCAAGAATAAATAAAGAACTCTCAAAACTGAATAATAAGAAAACAGATCAACCTAAATTAAAAATGGGCAAAAGAACTTTGAAAAAACATTTCACCAAAGAAGATATACAGAAGGCAAATAAGCACATGAAAAGACGTCGATTCAACATCATAGTTATGAGGGAAATGCAAATTAAAACCACAATGAGATACACTGCACATCCTCTAGAATGGCTAATTTTTAAAAGTCTGACAATACTAAGTGCTGATGAGCATGCGGAGCAACTGAAACTCGCATACATTGCTGGTAGAAATGCAAACAATGTAGATATAGCCACTCTGGAAAACAATTCGGCAGTTTTTTAAAAGATTAAACATCCACACCTACCAATGTATAACGTAGAAATTCCACTCTTGATTATTTACCTTAATGAGAATGTAAACATATGTTCACACGAAAACCTGTACGTGATTGTTTACGGCAGCTCTATTCGTAATACGTCCAAAACTGTAAAAAACCCAAATTGTCCTTCATTCACGGGTGAATGGATAAACAAACTGAGTGAGACAGCCATACAATGGTATATCCGTACAATGGAACAATACTCAGCAATAAAAAAGAATGAAGTACTGATACATGCTAGAACATGGATGAACCTCAAAATAATTACGTTGAGTGAAAGAAGCCAGGTAAAT,ORF1 MACSE reconst added to beginning,L1MD3.ORF1.hs6_sqmonkey.marg,L1MD3.ORF2.hs11_armadillo.marg,0,714,726,3969,3975,6
L1ME3D,TTCAAAAATACAAAAAAAATAAAAAATAATGATTTTAAAAAAAAAAATATTTAAATGCATGTCTGAACTGGTGAGAAAATAAAGAAAATTAATTGAAAGCCAGAAATGAAAAGAAAGGAAAAATGCAGAAAGGTAAGCAACAATGAAACCATCATATATTCTGAGGGTATTAGCCAAATCATATTAACTTAAATCTTAATTTTGATAAGTTTTCATGATAAAAAAAATAAAAGAGAAGGCTTAGGGTCCGATAAAAGTGAGGAAATAAATAAAACCTTAAATAAAGCTGAAATCCCAAAATCGAATAATAAATAAAAAAAAAACTTCATGCAGAGGAAAACAGAGTGACATAAATTTCTACTAGGTATTAACAAAAATAAATAATGGGGAAAAAAATTAATCATGAGACAATCAAAATCCAAAATAAATAATTTTTTAGGAAAATACAAATTATATAAATTGATTGGAAAAACAGAACCAAATAAAAAAATTAAATTTAAATAGATAATTGATGGATATCGTCTCTAGAACAACTCAAAAAGAAAATTTAAATCAAATATTTATGAACATAATTTAAAAAAAAAAAAAAAAATAAAAAATAAAAAAGGAAACAGAAAGAAAAAAGACAGCAAAAAATACAAACAGCAGAATCAGTTATAAAAAACTCATAAATATAAAATATAAATAAATGAAAATAAAAAAAAAAAATATTAAACTAAAAGTATGTAAAAGAAGAAAAAGAAAGTCAAAAATTAAGCAAACAAATTTGTAAAAGAACACAGTAGAAGTTCTAAAAATGGAAACTATAATTGAAATTTAAATTTCAATGAATGGATTTAACAGGAGATTCAGGACAGTGAAAGAGAGAATTAGTGTACTTGAAGATAGAACTGAAGAAATTATCCAAACTGCAGTGCAAAAAAAAAAAAAATTAAAAATAGGAAAGAGATGAAAAGATATAGAAAGATTAGAATGAAAAGATCTCACGTAAGTGTAATAAGAGCTCCAGAAGAAAATAAAAATAGAGAGAATGGGCAAGAAGCAATATTTGAAGAGATTATGGCTAAGAATTTTCTAGAATTGCTGAAAGACACTAAACTTCAGATCCAGAAAGCCCAATAAATTCCAGGCAGAATAAATATAAAGAAAACCTCACATACACACAAGATATCTAAATTTCAAACTGCTGACAACGAAAATGAAGAAAAAATATTTGAAAAAATTATGGCCAAATTTTCCCCAAATTTGGGGGAAATAAAAATAACTTCAGAAAAAAGACAAAATTCCCCAAGAAAATCACCACTCATAGGCATATTAAAAGAGAAAAACAAAAAAAAAAAAAAATCTAGACTGATGGCTGACTATAAAGATCGGCTGACATTAAAACATACATTGAAGCACAGGAGATTAATTTAATCAGTATTCAAAGAAAAAATACAGTGTAATAAAATTTTTTCACCACCAAAAATAAAATTTTTTTGTACCCAAGAACAAATAGGGCAAAATAAGTATATGTTCAGAAAAAGAAAGAATGAGAGTGTTTTTCAAATAAAAGGAAATAGACCCTTACTAACGGCAGATCTGTACTATAAAGAAATTCTAAAGGATATACTTCAGGAAGAAAGAAATCGTTGGAAGATCTAAATAAAAAGCTGAAAAATTTGAAAAAGAATTAGCAAGGGGAGGATAAAAACAAATGAACAAAAATGTATAGAAAAGTATAATTTGTGAAGTTTAAAGAAAAAAGGAATAACAATCTAACTAACGAGGAATAATAGTATATAAGTTGGGAGGGGAATAATTGAAGTTAAATTATTCTAAGGTCCTTGTATTGTTTGGGAGGAGAGTAAAAAAACTAATAAATTTATACTATATTAAGAATGCTTGTTAAAATATCCATGGTAACCACTAAAATAATAGAAATACAGAGTACAACATTCAAACTAGTAGAGAGAGAAAATGGAATGAGAAAAAAAATGAAAAAAACTTAAAAAAAACAACCAAATAGCAGGAAAAACAGGAAAAGAATAAAGATAGAACAAATAGAAAGTACATAAGAAAATGGTAGAATTTAATTCAAAAAAGATCAAATAGTAAAATAAACGCTAAAGGAAAAAACCCTCCAGTTAAAAATAAAAGATTGTTAGACTAGATTTATATAAAACCACTATTTGGTGCTGATAAATATTCATATAAGAATATCCTCTAACATAAGGACACAGAAAGTTTGAAAGTAAAAGGATGAAAAAAGATATGCCAGGCAAATACTAACAAAAGAAAGCTGGTATAGCTATATTAATAAAAGACAAAATAGACTTTAAGGCAAAAAGTATTAGTAGAGATAAAGAAGGTCACTACTTAATGATAAAAGGTTTAATTTACCAGGAAGATATAACAATTCTAAATTTCTATGCCCAATAACATGGCTTTAAAATATATAAAGTAAAAATTGACAGAACTACAAGGAGAAATTGACAAATCCACAATCATAGTGGGAGATTTTAACACAACTCCTTCATTTCAGAAATTGATAGATGGAGCAGACAAAAAAAATCAGTAAGGATATAGAAGACTTGAACAGCATAAGCTTGATCTAATGGAAACACATACAGAACACTGCACTCAACAATTACAGAATACACATTCTTTTCAAGTACACATGGAACATTTATGAAAACTGACCACACTCTAGGCCATAAAGCAAACCTCAACAAATTTCAAAAGATTGGTATCATATAGATCATATTCTCTGACCACAATGCAATTAAGTTAGAAATCAATAACAGAAAGATAACTAGAAAAATCCATATATTTGGAATTAAAAAATACACTTCTAAACAGCTCATGGATAAAATAAGAAATAACTAAAAAAAATTTAAAACTGAATGATAATGAAAATACTACATATCAAAACTTGTGGGATTCAGATAAAGTAGTACTTAGAGGGAAATTTATAGCCTTAAATGCTTACATTCAAAAGGAAGAAAGGCTTAAAATTAATGAGCTAAGCATCTATCTTAAGAAGTCAGGAAAAAACAGCAAAATAAACCCAAAGAAAGTAGAAGAAAGAAAATAATAAAGATAAGAACAGAAATTAATGAAATAGAAAACAAACATACAATAGAAAGGATTAACAAAGTCAAAAGTTAGTTCTTTAAAAGACTAATAAAATTAATAAACCTCTGGCAAGACTGATTAAAAAAAGAAAAAAAGAGAGAAAGCACAAATAAGCAATATTAGGAATGGAAAAAAGGACATAACTACAGATGCTGAAGAGATTAAAAAGATAAGAGAAGGTTATAACAACTTTATGCCAAAAAAATTTGAAAATTTAGATGAAATGGACAAATTCTTAGAAAAATATAACTAAACTTATCAAAACTGACTCAAGAAGAAATAGAAAACCTGAATAGTCTTATAACCATTAGTAAAATTAAATCAGTGGTTAAAAATCTTCCCACAAAGAAAACTCCAAGCCCAGATGGCTTTATAGGTGAGTTCTACCAAACATTCAAGGAACAAACAATTCCAATCTTACACAAACTCTTCCAGAGAAAAGAAAAGGAAATACTCTCCAACTCATTTTATGAGGCTAGCATAACCTTGATACCAAAATCAGACAAGGACAGTACAAGAAAGGAAAATTATAGGCCAATCTCTCCTAATCATGAACATAGTTCCAAAAATTCTAAACAAAATATTAGCAAACCAAATCCAGCAATGTTTAAAAAGATAATACATCATAACCAAGTTGGGTTTATCCCAGGAATGCAAGGTTGGCTTAATATTAGAAAATCAATTAATGCAATTCATCACATTAACAGATTAAAGGAGAAAAACCATATGATCATCTCAATAGATTCAGGAAAAGCATTTGATAAAATTCAACATCCATTCATGATAAAAACTCTTAGCAAACTAGGAATAGAAGGAAACTTCTTTAACCTGATAAAGGGTATCTACAAAAAAATTTACAGCAAACATCATACTTAATGGTGAAACGTTGAAAGCATTCCCTTTGAGATCAGGAACAAGACAAGGATGTCCATTACCATCACTTCTATTCAACATTGTACTGGAGATCCTAGCCAGTGCAGTAAGACAAGAAAAAAAAAAATAATAAAAGGTATAAAGATTGGGAATGAAGAAACAAAACTGTCATTATTTTATAGATAATATGATTGTATACATAGAAAACCCAAAAGAATATACAGATAAATTATTAGAATTAATAAGTGAGTTTAGCAAGATTGCTGGATACAAAATCAATATACAAAAGTCAATTTCATTTCCACATTACACCAACAGTTAGAAAATATAATTTTAAAAAACCATTTACAATAGCAACAAAAAAAAAAAATACCTAGGAATAAATTTAAAACAAAGATATGTAAATCTTTTAGGAGAAATCAATTAAAAAATTTTATTGAAAGACATTAAAAAACTAAATAATAAATAGAGAGATATACCATGTTCATGGATAGGAAGACTCAATATTATAAAGATAACAATCCTCAAATTGATCTATAGATTCAATGCAATTCCAATAAAAATCCCAACAGGATTTTTCATAGAACTTGACAAGCTGATTCTAAAAATTTATATGTAAGAGCAAAGGGCCAAGAATAGCCAAGACGCTCTTGACGAAAAAAAAAAATGGGAAGACTTGTCCTACCAGATATCAAGATTTATTATAAAGCTATAGTAATTAAGAAAGTGTGGTATTGGCGCAGGGATAGACAAATAAGCCAATGGAACAGAATAGAGAGCCCAGAAACAGATCCATGCATATATGAAAACTTGATTTATGACAGAGCTGGCATTGCAGAACTATGGGGAAAGGATAGACTTTTCAATAAATGATGCTTGGACTATTTATGTTTCCATATGGGGAGAAAAATAAAATTGGATCCCCTCTTTCAAGAAACACACATAAAATCAATTCCAGGTGGATTAAAGACTTAAAATAAAATTTGAAATTTAAGAAACTATAGGAGAATATCTTTATGACCTCGGGGTAGGGAAAATTTTCTTAAACAACACACAAAAAGACTCCACATAAAGGAAAATATTGATAAATTCGACTACATTAAAATTAAAAACTTCTGTTCATCAAGAGACAACAAAGAGGCAAAAAGACAAGCCACAAACTGGGGGAAGATATTTGCAACACATATAACAAACAAAGGACTAGTATCCAGAATATATAAAAATCCTATAAATCAATAAGAAAAACAACTTTATAGAAAAATAGGAGACAAAACACACAAACATTTCACAGAAGAGGAAACACAAATGGCTCATAAACACATGAAAAGATGCTCAACCTCATTAGTAATCAGGAAAATGTAAATTAAAATTACATGAGATACTATTTCATACCCGCCAGATTGGCAAAACTTAAAAAATTTTACAATATCAAGTGTTGGCAAGGATGTAGAGCCATGGAAATTCTCATGCACTGCTGGTGGGAGAATAAGTTAATGTAAATTGGTACAATCACTTTGGAAAACTATTTGGCATTACCTAGTAAAGTTGAACATGCAAATTCCCCATGACCCAGCAATTCCATTCCTAGGTATATACCTTAGAGAAACTCTTACACATGTGCACCAGAAGACATGTACAAAAATGTTCATAGCAGCATTGTTTATAATAGCCCAAAACTGGAAGCAACTCAAATATCCATCAACAATAGAATGATAAACAAATTGTGGTATATTCATACAATGGAATACTATACAGAAGTAAAAATGACTGAACTACAGCTACATGCATCAGCATGGATGAATCTCAAAAACATTACGTAGAGGAGAAAAGCAAGTCACAGAACAATACATACAGTATGATTCCATTTATATAAAGTTCAAAACCAGGCAAAACTAAACAATACATTGTTTGGGGATACATATATAGGTGGTAAAACTATAAAGAAAAGCAAAGGAATGATTAATACAAAATTCAGGATTGTGGTTACCTTGAGGAGGGGAATGTGGCTAGCTTTGATAGGGGATGGTCATACAGGGAGCTTCGAGGGTACTGATAATGTTCTATTTCTTAAGCTGGGTGGTAGGTACATGGATGTTCAGTTTATTATTATTCTTTAAACTATATTTACATACACTCTTAATTTGCATATGTACACGTTTCATATATTTTTGTATATATGATATATTTCACAATAAAATA,"ORF1 replaced with MACSE reconstruction but not ORF2",L1ME3D.ORF1.hs8_ctshrew.marg,None,972,1629,6189,6189,6189,0
L1ME3C,ATCATGGAGGATAAGAGACAGGACTAGCTTGCAGCTCCGACTCGGACAGAGCAGCATGCGAAGGTTTGCATCGTGAATTTTAGCTCCAGAATAACTGCAAGAACAAACCATGAACCCCCAGAGGACCCACAGACCCTCTTAAGGAAGTAGAGTGCTCCTGCAGGAACTGGGAGATACCCCAAATACTATGAGTGCCCCACCTGTGGAAGTAGAAAAGGAAGATCCTCTGCTCCTGAACACACACCCTTACTGGGGAAACGGAAAATTTGTTTGCAGGACAAGTTTCTGACCTTACCTGGAGCTGAGTCAATTTAGAGAGCTGAGTAAAATACAGGGGTAGAGGAAGCAGCAGGAAGGGTCCTGGGAGCTCACTGGGTCCCCAAGCTGGCCATTCATGCCTGGCACCACAGGGATCCATCGGGAGGGTGTTCAGAGGTACTGGGGAAAATGCCACAGGGAGAAGGAAGTCTCCAGCTGAACTTTGTAACAATTTGAACCAGGTGAGAAGCCTCCTGGCCAGAACTCAGGGGAGAGCATGAATCCAGTCAGCAGATTCCACAGGTGGGGGAAGAACTCAAGTCCTTTTCTTTCACAGCTGGGAGGCGGGTAGCCTGGGGCAAGTTCTCAAGCCCTGCTTGCCTGCTGCCTGGAAACAAACTCTGTGCTGTTGGAGGGGGCATAGTGGGAGTGAGACCAGCTCTTCAGTTCGTGTGGGAGCTGGGTGAGGCCTGTGACTGTCAGCTTTCCCCCACTCCCCTGACAACCTGCATGACTCAGCAGAGGCAGCAATAATCCTCCTAGGTACACAACTCCGTTGACCTGGGAACCTCACCTCCAACTCTCACAGCAGCTGCAGCAAGACCTACCAAAGCAGAGCCTGAGCTCAGACACGCCTAGCCCTACCCCCACCTGATGGCCCTTTCCTACCCACCCTGGAAGCTGAAGACAAAGGGCATATAATCTTGGGAGTTCTATGGCCCTGCCCACCACTGGTTCCTCTCCATACTACCACAGCTGATGCTCTCTGGTAAGCGTTACCTCCTAGCAGGAGGCCAACCAGCACAAAAATAGAGCATTAAACGACCAAAGCTAAGAACCCTCACAGAGTCTCCATTTCACCCCACTGCCACCTTCACTGGAACAGGTGCTGGTATCCATGGCTAAGAGACCAATAGACAGTTCACATCACAGGACTCTGTGCAGACAACTCCCAGTACCAGCATAGAGCCTGGCAGACTTGCTGGCTGGCCAAACCCAGAAGAGAGATAACAATCACTGCAGCTCGGCTCCCAGGAAGCTACATCCATAGGACAAGGGGGAGAGCACTACATCAAGGGAACACCCCATGAAACAAAAGAATCTGAACAACAGCCTTCAGCCCTAGACCTTCCCTCTGACAGAGGCTACCCAAATGAGAAGAAACTAAAAAAACACACACACACACACAGAAAGCCAACTCTGGTAATATGACAAAACAAGGCTCTTTAACACCACAGTCTCAGTAATAGAATTGAACAAGTAGAAGAAAGAAATTCAGAGCTCAAAGACAAGGTCTTCGAAGTAGCCCAAACCAACAAAGACAAAGAAAAAAGAATAAGAAAATATGAACGAAGCCTCCAAGAAGTCTGGGATTATGTTAAATGACCAAACCTTAGAATAACCAGTGTTCCTGAGGAAGAAGAGAAATCTAAAAGTTTGGAGAACATATTTGGGGGAATAATCAAAGAAAACTTCCCTGGCCTTGCTAGTCACCTAAAGACATCCAAATACAAGAAGCACAAAGAACACCTGGGAAATGCATCACAAAAAGGTTGCAATAGGCACATTGTCATCAGGTTATCTAAAGTTAAGATGAAGGAAAGAATCTTAAGAGCTGTGAGACAAAAGCACCAGGTAACCTACAAAGGAAAACCTCAGGTTAATGGCAGATTTCTCAGCAGAAGCCATGTAAGATAGAAGGGATTGGGCCCTATCTTGAGCCTCCTGAAACAAAATAATTATCAGCTGAGAATTTTGTATCCAGCAAAATTGAGCATCATATATGAAGGAAAGATACAGTCATTTTCAGACAAACAAATGCTGAGAGAATTCACCACCACAAAGCCACCACTACAAGAGCTCCTAAAAGAAGCACTAAACATGGAAAGAAACAACCAGTACCAGCCACTGCAAAAACATGCAAAATTGTCCTGGGAACACATCAAAACAGAACGTCTTTAAAGCATAAATCACACATGACCTATAAAACAAAAATACAAGTTAATTAGCAAAAGCAACAACAAAAATAAAAAAACGAGGTACACAGGCAACAAATAACATGATGACAGGATCAAATTCACACATCTCAATACTAACATTGAATGTAAATGGCCTAAATGCTCCACTTAAAAGATACAGAACTGCAGAATGGATAAGAACTCCAGATCCAACTATCTGCTGCCTTCAGGAGACCCACCTAATGTATAAGGACTCACATAAACTTAAAGTAGAAAGGTGGAAAAAGGCATTTCATGCAAATGGACACCAAAAGCGAGCAGGGTTAGCTATTCTTACATCAGACAAAACAAACTCTAAAGCAACAGTGGTTAAAAGAGACAAAGAAGGACATTATATAATGGTAAAAGGCCTTGTCCAACAGGAAAATATCACAATCCTAAACATGTATGTACCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTAATAGATCTAAGAAATGAGGTAGACAACAACACGATAATAGTGGGGGACTTCAATACTCCACTGACAACAATAGACAGTTCACCAAGACACAAAGGAAACAAAGAAACAATGGATTTTAACTTATCTCTGGAACAAATGGACTTAACAGATATTTACAGAACATTCTACCCAACAACTGAAGAATATACATTCTATTCATCACCACATGGAACATTCTCCAAGATAGACCACATGATAGGGCACAAAACAAATCTCAGCAAATTTAAGAAAACCGAAATTATATCAAGTATTCTCTCAGACCACAGTGGAATAAAACTGGAAATCAACTCTAAAAGGAGCCCTCAAAACCATGCAAATACATGGAAACTAAATAACCTGCTCCTGAATGATTATTGGGTGAACAATGAAATCAAAGGTGAAAATTTAAAAATATTCTTTGAACTGAATGATAATAGCGACACAACCTACCAAAACCTCTGGGATACAGCAAAAGCGGTGCTAAGAGGAAAGTTCATAGCATTAAATGCCTACATCAAAAAGTCTGAAAGAGCACAAATAGACAATCTAAGGTCACACCTCAAAGAACTAGAGAAACAAGAACAAACCCAACCCAAACCCAGAAGAAGGAAAATAAATAAACAAGATCAGAGCAGAATTAAAGTGAAACTGAAACAAAAAATACAAAAGATAATTGAAACAAAAAATACAAAAGATAAATTGAAACAAAAATTACAAAAGATAAATGAAACAAAGAGCTGGTTCTTTGAAAGGATAAATAAAATTGATAGACCATTAGCGAGATTAACCAAGAAAATAAAGACAATTTTCGAGAAAAGAAGAGAGAAGATTCAAATAAGCTCAATTAGAAATGAAATGGGAGATATTACTACTGATACCACAGAAATACAAAAGATTATTCAAGGCTACTATGAACACCTTTACACACATAAACTAGAAAACCTAGAGGAGATGGATAAATTCCTGGAAATATACAACCCTCCTAGATTAAACCAGGAAGAAGTAGAAACTCTGAACAGACCAATAATAACAAGCAATGAGATTGAAATGGTAATTAATAAAAATTTCCCAACCAAAAAGAGTCCAGGACCAGACGAATTCACAGCTGAATTCTATCAGACATTCAAAGAAGAATTGGTACCAATCCTATTGACACTATTCCAAGGAATAGAAAAAGAGGGAATCCTCCCTAAATCATTCTATGAAGCCAGCATCACCCTAATACCAAAACCAGGGAGAGACATAATCAAAAAAGAAAACTACAGACCAATATCCTTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCTAACCAAATCCAACAGCACATCTTTAAAAAGGTAGTCCACCATGATCAAGTGGGCTTCATCCCAGGGATGCAGGGCTGGTTTAACATATGCAAGTCAATAAATGTGATACACCACATAAACAGAATTAAAAACAAAAAACACATGATCATCTCAATAGATGCAGAAAAAGCATTTGACAAAATACAACATCCCTTTATGATTAAAACTCTCAACAAAATCGGCATAGAAGAGACATACCTCAATGTAATAAAAGCAATCTATGACAAACCCACAGCCAACATTATACTGAATGGGGAAAAGTTGAAAGCATTCCCCCTGAGAACTGGCATAAGACAAGGATGCCCACTCTCACCACTTCTATTCAACATAGTACCGGAAGTTCTAGCCAGAGCAATGAGGCAGAAGAAAAAAATAAAGGGCATCCAAATTGGTAAAGAGGAAGTCAAACTGTCGTTGTTTACTGATGATATGATTGTATACCTAGAAAACCCTAAAGACTCATCCAAAAAGCTCCTAGAACTGGTAAATGAATTCAGCAAAGTTTCAGGATACAAAATTAATGTACACAAATCAGTAGCCTTGCTATACACCAACAGCAACCAAGCTGAGAATCAAATCAAGAACTCAATCCCTTTTACAATAGCTGCAAAAATAAAAATTAAATACTTAGGAATATACCTAACCAAGGAGGTGAAAGACCTCTACAAGGAAAACTATAAAACACTGCTGAAAGAAATCATAGATGACACAAACAAATGGAAACACATCCCATGCTCATGGATGGGTAGAATCAATATTGTGAAAATGACCATACTGCCAAAAGCAATCTACAAATTCAATGCAATCCCTATCAAAATACCACCAACATTCTTCACAGAATTAGAAAAAACAACTCTAAAATTCATATGGAACCAAAAAAGAGCCCACATAGCCAAAGCAAGACTAAGCAAAAAGAACAAATCTGGAGGCATCACATTACCCGACTTCAAACTATACTATAAGGCCATAGTCACCAAAACAGCATGGTACTGGTATAAAAAAAATAGGCATATAGACCAATGGAACAGAATAGAGAACACAGAAATAAACCCAAATAAATTTGCAATGCAACCAACCGATCTTCAACAAAGCAAACAAAAACAGAAAGTGGGGAGAAAGGACACCCCATTCAACAAATGGTGCTGGGATAATTGGCTTGCCACATGTAGAAGAATGAAACTGGATTCTCATCTCTCACCTTATACAAAAATCAATTCAAGATGGATCAAAGACTTAAATCTAAGACCTAAAACCATAAAAATTCTAGAAGATAACATTGGAAAAAAACCCTGTAGACATTGGCTTATAGGCAAGGACTTCATGACCAAGAACCCAAAAGCAAATGCAACAAAAACAAAGATAAACAGATGGGACTTAATTAAACTAAAGAACTTCTGCACAGCAAAAGAAACAATCAGCAGAGTAAACAGACAACCCACAGACTGGGAGAAAAAAATCTTCGCAATCTATACATCTGACAAAGGACTAATATATCCAGAATCTACAATGAACTCAAACAAATCAGTAAGAAAAACAAACAAACAATCCCATCAAAAAGTGGGCTATAAGGACATGAATAGACAATTCTCAAAAGAAGATATACAAATGGCCAACAAACATATGAAAAAATCGTCATCATCACTCAACATCATGAATGACCAGGGAAACGCAAATCAAAACCACAATGTAATACCAGTTAGAAAGCCTTACCTCTGCAAGAATGGCCATAATACAAAAAATCAAAAAACAGTAGATGTTGGCATAGATGCAGCTATCAGGGAACACTTTTACACTGCTGATGGGAATGTAAACCTAAGTGTACAGCCATTGTGGAAAACAGTGTGGAGATTCCTCAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCTACCCAGAGGAAAAGAAGTCATTGTACAATAAATATATGAAAATATATGAAAAATATACTTTCATACATATGTGTATAGCAGCACAATTTGCAATTGCAAAAACATGGAACCAACCCAAATGCCCATCAATCAACGAGTGGATAAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATACTGCTGCTGAAAGATCATTAGGGAAAAAACAAAAATCAAGATGGAATAAAAAATTCTTCGAACTGAATGACAATAATGATGCAATCTATCAAAACCTCTGGGATACAGCAAAGGTGGTGCTAAGAGGAAAGCTCATAGCCCTAAGTACCTAAGTACCTAAACTGACCTTCTAAGGTCACATCTCAAGAAACTAGAGAAACAAGAAC,ORF1 and ORF2 replaced with MACSE reconstructions,L1ME3C.ORF1.hs0_human.marg,L1ME3C.ORF2.hs0_human.marg,1494,2187,2320,6178,6384,206
L1ME3E,TTCTGTTTTCAAGATACAGCAGGCAAGAAATACTTCAAAACCTTTCTGATATAAAACGTTTAAAAGCTGAATGAGGTGTAAGAGATCTGTTTACATGTATTTTCAGGTTAGAAATGTGGGTACAGGTTCTGAGATGCTAAAATTGACAAGAAAGCTCTAATACAAAGAGGTAGCTAGCCTTAAAGTTGGTGGGCTTATTTTATAATTATCTGACTATTTCTGGATGTTCAGACTGTTTGGTTTATTTGGTTGCTTATAGGGAAGAAAAAACAAATGTAATTCCCATGCAATCTAGGATATATGAGCAAAAAATTTTTTCAAAGAGTATATTTTATAAGGCAAAACCCTCAGTAAAGGACTGAAATAGCATATAGCCCATCATAGTCTTCACTATAGTTGCAGGGACCAGTAACCTCTGAGAAATCTTAATCTCAAGACAGTTCTCATATGAATAGGGGGGCAGGGGAGGGGGGTCAAAATAGATACTTGCTTTGTGACTACAAATGACCAAATGAAAATTTTAGTTTAAAATTCTCCTGGTTTGGTGGAACCCCTAGGCACCTAACAAGTGGAAGTGCATGTTATCTCTGGAAAAATGCACTTAGTAACCATGACTCAAATAGTTCTCATAGAAGAAATGTCAAAAACATAAATCATGATAAAATATGATAATGCAAAATACATGAGGAAACAAGTTTTTATAAGACTCAGCAGAAGCAACAAGGAGTAAAATTAGACCCACTATATCTGGAAAAATATGAATCCCCTCAACTACAAGATAAGTAAGCTCAATATGTTTTAAAAAGTAAAGAAGAACATCAAAAGAATAAGGACAATAGATTATATAAAATAACAAAGTAGATTTAAGAATAAGTCAAATAGAACTTCTAAGAATAGAAAAATATAACAATTTAAATTAGAAATACAATGAATGGATTAAGTATCAAATTAGAAATAGCTAAAGAGAGAATTAGTGAACTGAAAAATAGATCTAAAGAAATTATCCAGATGCAATATAGATAGGAAAGAGAATAAACAAAGGCAAATAGAAATAGAAGATAGAGAACAGAGGTTTAACATATTTAACGGGAATTCCAGAAAGGAAAAAATAGAAAGAATGAAGGAAAAACAATATTTAAAGTAGATAATGGTTGAGAATTTCCAGAATTGATGAAAAACATCAATTCTCAGATTCCGGAAGCCCAATAAATCCCAAACAGGATAAATAAAAATTTTTCTTACGCGACACTCTAAAAAAAAAAAGCGACACCTAAAAAAAAAATAAAAAATTTATCTAAGTGGACACACTATAATCAAATAAAAGACAGAAAGAAAAGATAGATAGTCATTAAAGCTGGTAAAAAAAAGAGAAAAGAGAATTACATATAGAGAACGATAATTAGATTTATAGCTGACTTCTCAATAGTAGTAATTTGGAAGCCAAAAGACTATAAAATAATATATAATAAGGTCAAAAACTATCTCCAGAGGATATATATAGTGAATTTACTATTTTTTATAGTTAATGAAATATCCAGAGCAATATCATCTTTCTAATGTGAGAATGAAGACACATGTGTTTTCAGACAAATAAAAATTAAAGTGTTTACCACCAATAGATCTCCAACTAAAGAAAATTTTCCCAAATGTGTACTTCAGAAAAATAAAAAATGATCTAGAAGGAAGGTCTGAGATGTAAGAAGGTATAAGGAAAACAAAGATAATTGGTAAATATGTGGTTAAATATAAACACACATTGATTTGATAAAACATTGATTATGATAAATGTCTAATTTGTGAATTAAAAAAACCAAAAAAAAATAGAAGTAAAACATCAAAAAATAATGGTATATATGTCATTTTAAGTAGAGGTAATGGAAATAAATCAGGTCAAATTGTTCTAAAGTTATCGTATTGTTTTGGAGAAGGGTAAATATAGTGATTAACTTTTTATTTTATTAGATTAAGTTTGCATGTTGTAATTTCTAGGGAAGCCACTTCTTCTGCCCCCAGAAACAGATAGAAACAAAGGTAGTATCTTATTTCTATTTACTTGAGGAAATTATTAGAAGGGAGAGAGAAAAATGGAGTCTGTATAAAAACAATTTAAAAAAAGAAAGAAAGAGTTAAAAAAGAAGAATTAAAACAAATGTAAAATGGAAAACACATAAATCCAAATATATTAATAATCACAATCAAATAAAAATAAAAATCAAACTTGATAAAAGTGAAAGATTATCAGACTGGATTTTAAAATTTAAAATCTAGATATATTTTGTTTATAATATTTATACTTAAAATATAAGGATATAGAAAATTTGAAAATAAAAGAATGAAAAAGAAATATACTAGACAAATAGTAACAGAAAAGCTTATATACTTATATAAATACCATCCAAAATAGACTTTAATGTCTTTTTCCTTAAAAAATATTTATCAACTATAAAAAGAGTCACTACATAGCTGAAATAATAAAATGTTCAATTAAGACCAGGGATATATAAAAAGTTCTAAAATCGTATATTTGCATAAAATAACCATAACATATTTAACAGAAATGTTGATAAAAGTAAAGATGATTAAAGAAAAATCCACTATCATGGTGAGAAGATGAAACATTTTAACAAATTTTAGAAATTAATAGATCAAACAAACAAAACGTAGAGTGAGTAAAAATATAAAATATTTGAATAATATAATTAAATTTTTCAAAATGTAGATGTTAATAATTAAATATAAAAGCCACATTCTTTTAATAGAAAATACAACAAAGCACATGTAGAACATTTATAAAAACTGATGACGTATTAGGCTATAAAGCAAGTCTTAACAAATTTCAAAGAATCTTGATAACATATAGATCATATTATCTAACTAAAGACATTTTAATTAAGTGTTTTTATTCAGAGATAATACTTAAAAAAACTAGACAAAATCATGTGTGGAATTTAAAAAACACATCTATTAAATAACCCATGGGTCAAAAAAAAAAATCATAATACAAATAAAAATATCTTTAGAACTAAATAATAATGAAAATACTAAATATCAAAACTTGTAAGCATGCAGCTAAATTAGTACTTGGAGGGAAATTTAAAGTCTTAAATGTGTACTTTAGAAAAGTTTTTAAAAGGCTGAAAATTAATAATCTCAGCATACCATTTAAGAAATTAAAAAAAGTTTATTAATTGAATAAACTCAAGAAAAGTAGAAGAAAATAATATATAAAAATAAAAACAAATCAGTATAATGGAAAACAAAAATTGTAAAGAGAATCAATAAAGCCAAAAGATGGTTCTTTGTAAAGACTAATTGATTTTTAAAAAATTGCTTCTCAGCCTTTTGGCTAAGATCAAGTGATAAAAAATTATGATCAAGATTAAAATTATGATTAAGATCAAGACTGATAAAACTGTGGCAATAATAATTGAGGAGTAAGAGAAGGATAGAAATAAATAATATATATTAGGGAGAGAAATAAAAATAAAAAGTATTATGGAAAGTATATAACTACAAATGGGGCAGAGATTTAAAAGAAAATAAGAAAATATTATGAACCAACTTTATGACAATATAATTTAAAACTTAGATGAAATAAGCAAAAATTGCTAAAAAAATATAAATTAAAAAAATCAATTCAAGAAGAAATAGAAAACTAATATGGTCTTATAATCATTAAATAAATTGAATCAATAGTTTAAAAATCTTTCCCTTAAAGAAAACATGATGACCAGAAAGTTTTACATAGTAAGTTCTGCCAAACATTGAAAGAAAAGATAATTTCAATCATACACAAAATTACACAAACTCTTTCAGAGAATAGGAAAAGGGATAATATTTCATAATTCTTTTTTGAGGCTAGTACACCTTTCATGCTAAAACACAGAAGGAGAGAAAAGAAAAGACAAATTACAGGCCAATTTTACTTATAAATATAGATACAAAAATTCTTTAGAAAATATTAACAAACTGAATAGCTGAACACACATACGCATACACACACACATTCATGTATATCCATGTATATAAAAAAATAACACATTTCATTAACAAATTTGATTTATCTCAGGAATGCAAGTTTGGTTTAACATTAGAAAATAGATTAATATAATTCACTACATTAATAGAAGAAAGGAAAAAACACATATGATTATTTCAATGGATGCAGAAAAGAAATCACTTGATAAAATTCAACATCCATTCATGATTTAAAAATAAAAGGTTTTCAGCAAATAAAAAATAAAATTTAAGTTTTTTTATCTGATAAAAAATAACTACAAAAAAGTCTGCAGCAAATATCATACTTAATGATGAAAAAAGGGAAGAAGAAAGTATGTATGCAGTTATTACTTTTTTCTATACTATCCATGATGACCTAGCCATTGCAGTAATGCAATTTAAAGACATTACATGTGTAAAAATTAGAAAAAAAGGGCAAAATTTTAGAATTGTATTCATAGTAAAATTAAAGAAAGATACAGATAGATCAATTATTAGAATTAAGAAGATATATTAGCAAGTTTGCTAGATATGAAATCAACATAAAATAATTGCTATTCTATATGTCAGCAACAAACAGAAAAATAAAACAATTTTAAAATATAACATTTAGAAATATCAAGTAACTAAAAATAAAACTATCATAATATATGCAATAATTAGGGAGAAAACGGAAGCTTTATTGAAAAAAAACCCTTAAATTAATGAAGAGATATATTGTCATGAGTCAGAGCACTTAACATTGTAAAATATCTCTCCAAATTGATCTATAGATTCAACCTGATTCCTGTGAAGTGCGAAGGGTTTTCTTTTGTTATTGTTGCTGTTGCTGCTGTTTTCTTCCCCCAACCCCCGTGGAACTTGACAGACTACAATTAGTTCTAAAATGAATATATAAATTCAAATTATCAAAAATAATAAAAGCATTTTTAAAAAGAAAGGGGGGGGACTAGCTCTATAAAAGATTAACATTTGCTATAAAGCTATAGAAATGAAGACAATGTGATATTGGCACAGAGATAAACCATTTGATGTTGAAACAGGAAGAGAACCCTGGAATAGAGAAACACACATATGAACACTAGACATGTGATAGAGGTAGTATTGCAGTTCAGTGGGTAAAGGGTGGATGTTTTGCTACTTATTACTGATATATTTAATTATCCATATGGTTAAAAATGAAGCTGGAGTCCTTCCTCATACCAAATAATGAACCAATTCCAGGTGGTCTAAATGTAAAAATGAAAGACAACATTATAAACATTTGTAAGAAAAAATAGTAAACTATGTCTGTTCTCCCACAGAGATATTCCCAGAGATTGAGAATGATTTCTTGAAATATATATAATAAAATAGATAAATTCCACAAAATTAAAATTTAAAAATGAGGTTTATTGAGGGAGATTAAAGAAAATAATTGAGAAAAATAAAGACAAGCCACAGCAGGGAAGATGGCTGCTGCACAAATAATCAACATGGCATGCTTACCCAGAACACATAAAGAAATTCCATGATTAAGTAAGAAAAAGACAACTAAATAAAAAAAAAGAAATTTCACAGAAAAGGAAACATAAGTGGCCTATACACATGTGAAAGTTATTACAAAAATTTCAACTCGGAGCAGTTGAGGAGCAGTGGACACTTTTGTCCTCTGCTGCTTTGTGTGTAAATTGCTTCCACCACTTTGAAAAACAGGCATGGTATAGTAAATTATAAAAAGTGCACAATCAAAGATTCAGCAATTTCACTTCTAAGACATATACTCTGGAAAAAACTTTTACAAATGTGTACCAACAGAGGTGTATAAAAAACATAGCAGTGATAGTACAACACTGGAATTAATTGCAGCATATTCATGCATAGTAATATTGTCAATGTAATAAAAATGAATTAACTACAACTGCATGTAACATAAATGTAATGTTTAGCACAAAATTCAAACAACAAGATAATAAACATAATATAATTCCATTTGGGTAAATTTCAAAACATATAAAATAAAACAATATGTTTTTGGGGGAATCTATAAAATTAGGTAAAATACTTTTAGAAAAAAACAAAATGATGATGATTTTTACTATAGGGTATGACAAGGGATGGGGCCTAAGGGGGCCCAAAGATGGCTAAATCTGCTGGGTAGAGAACACCTGAGTGTTTTGTCTTTTTGTCTCCTCTACCTAGGCATATAAGTGTTCATCTGGAAGTGTTTAATAATTAATAAAAAACTAT,Bestfl copied - no MACSE reconstructions succeeded,None,None,0,0,6228,6228,6228,0
L1ME3F,ATGGGGAAAAAACAGAACAGAAAAAAAAGAAACGCCAGAAACCAAAGGGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAACAACAGAACAAACATGGATGGGGAATGACTGTGACGAGCTGAGAGAAGAAGGCTTCAGAAGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGGAAAAAACTTAGAAGAATGTATAACTAGAATAACCAACAAAGAGAAGTGCTCAAAACAACTAATGGAGCTGAAAACCAAGGCTGGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCAACGAGAATAAATGCAAGAAAAAATATCAAAAATGGAAGATGAAATGAATGAAATGAAAAAACAAGGGAAGGGGAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTACCTAAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACAAAAGAGAAAAACAACATCCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACACCACAAAGATGCTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGCTAAGAAAACACACAAACAAAGTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAAAAGACAAGAGGGACCAATATTAAAAATGCTCAAAAAAAAAAACTATCAAACCAGAATTCCACACCCAACCAAACTAACCTTCAAAAGTGAAAGAGAAATAAAAAACTTCACAGACAAACAAAAACTGAAAGAATGTGTCACAACCAGACCTGCACTAAAAGAAATCCTGAAAGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGAAGAAGGCTGAATAGAAACAGCTACAGTTGGACACAGATGTAGATATGGCAGAGATATTAAGATTATCAAACCATGAATTTAAAATGACTATAATTAATATAGTAAGAGTTCCAACAGATAAAGTAGACAACATATAAGGACAGATGGGAAATGTAAGCAGAGAGAGAGTTCCCCTAATAAACAATACAAAATGAGATGCTGGAGAGAATCTGGTAAACTCATTAGTAGACTGGACATAGCTCACAGATGAAAAAATCTCTGAACTTGAAGATATGTCAGTAGAAAATCACAAATGAAAAGCAAAAAAAACACTGAAAAAAGATAAAACAGAATATCCAAGAACTGTGAGACAACTAAAGCAGGTGTAAACAAGCTTAAAATGACAATATAAAAAAACAAAAAAGGAATAATAATCTCTGTAGGAGAAAATAATGACTAGAAATTTCCCCCAAATTAATTTCTGACACCAAACCACTGAGCAATCAAGATTGAAGAAAACTACCCAAATTAAGTGAAAAAACAACTACACCTAAAATATATTCAAAAACCAAAATTGAATAAAAAAAAAAAGATGGGGAAATAACTATACAGAAAAAAAGATAAGAATTAAATCAAGCTTCTCATCAACCATGTAAGAAAGCTGGTAGAGGAAAATATTAAAAGTGTTCATTAAAAAAAACATCAAACTAGACTTCTAAACCATATGGAATTATTTTTAAAATTTTAAAAAAAATTTAGAACTTTGTCAAACAAACAAAAACTGAAGAAATATGTTAAAAATAGAGATGCCTTATAAGACAAGTTGATTAACTGTAAAAAAGGAGGAAAATAATATAGATCAGAAACTTAGATATAAATAAAGAAAAAGAAAGCAACAAAGAAGAATTGATTAAGGTAAAATAAAAAATTTAATTTTCTTATTCTTAGTTGATATAATAGAAAATAATTGTTCAAAATAATAACAACAACCATATTTATATTATATAGATAAGATTATAAATATACACCTAGAGAAGAGCAACTCCAAGACACATTATATATATACATATATATATAATGGACAAATGAAATAAATGAAATTAAGGAAAGGAGGAAAAGGAGATCAAAAAAGATAGTAATGTTGTATTATTATAGAGTAATTGCACTACCCATAAAACAATATAATGTTATTTGAAAGTAAACTTAGATTCATTATAAGTATAAATTAAAAACTCTAAAGAAAACCCTACAATAAAAGAACATATAATTGATAAGCTAAAAATGAAAAGAAAATATAATTACTAAAATGCTCAAAAACAACCAAAAAAAGAAAGAAAAAGAAGGTAAGAAAAAAACTGCAACAACTCACAAGAAAAATAACCAGAAAACAGTAAAAAGGCAGAAATGGCAGACATCAATCCAACTATATCAATAATCACTTCAGATGTCAATGGTCTAGATAAACCAATTAAAAGATACAGATTGTCAGAGTGGATCAAAAAACAAGACCTAGTGATATGGTGTCTACAGGAAATCCACTTTAAATATAAAGAAAAATACAGGTTAAAAGTAATGGGATGGAGAAATATATACCATGCTAGCATGAATCAAAAGAAAGCTAGAGTAACTATATTAATTTCAGGTATATCAGGTAGCAGAGCAGGAAAATTTATCAGTGATAAAGAGGGGTATTACATAATGATGAAGAGATCAGTTATCCAAGAAGACATAAATACCCTTAATGAGCAGGCACTTAATACCCGAGTGTCAAAATGTATGAGGCAAAAATTGATAGAACTTGAAGGACAAAGAAATGAATCCATTATAGACTTCCACACAATTGTAGTTGGCAACTTCAACAACCCTCTATCAGAGAATGGACAGATAGAGCAGGTACAGAAATTCAGCAAGGGCACAGTTAAACTCAAATCAGCTCTGCACCAATGGGATATAATTGACATCTGTATCAAATACTTCATTCAACAGCAAAAGAATACACATTATACATTTTTTCAAGTTCACATACACACATTCACCAAAACAGATCACATTCTTGGCCATAGAATATGCCCTAACAAATTCAAAAGAATGAAAATCATACAATGTCTGCTCTCAGACTACGATGGAATTAAACTTGAACTAAATAACAGAAAGATATGTGGAAAACCCCCAAATACTTGGAGATTAAATAACACACTTCCAAATGACTACACAAATCAAAGAAGATATCTCAAAAAAATTTTACAATATTTTGAACTAAATAAAAATAAAGACACAACATACCAAAATTTATGGGATATAGCAAAAGCAATGCTAAGAAGAAAATTTATAACATTGAATGCATTTATTATAAAAGAAGAAAGATCTAAGATGAGTAGTGTGAGGTTTCTCCTTAGTAAACTGAAAAATAAGAGTAATACTAATCCAAACCAAACAGAAGAAAATGAAATAATAAAAATTAATGTCGAAATTAATAAAATTAAAAATAGGAAATCTATAGAGAAGATCAATGAAATTCAAATTTGGTTCTTTTAAAAGATGGATGAAATTGATAAACCTCTAGCCTATCTAATTAAGAAAAAAAGAGAAGAGCACAAATTACTAATATCAGATATTGAAAGAGGGGACATCACTACAGATTCCATGGACATTAAAAGAATAATAAGAAAATAGTATAAACACCAACTCTATGCAAGTAAACTAGACAATTTAGATAAAATGGACAAATTTCTTTAAAGATACAGTTTCTCAAAACTAACCCAAGAAAAGGTAGAAAATCTAAATATGCCTATATGTATTGAAGAAATTGAATCAATTATTAATAGCCTTTCAAAACATAAAGTACCAGGCCTAGATGGGTTGAAATTCATTGCTGATAATTCTACCAAATATTTAAGTAATAAAATTATACCAAGTCTTTTCAAACTCTTCGATATAGTAGAAAAAGAGAAAATACTCCCTAACTCATTATATGAGGCAAAGAAAAACCTGATACTTATACCAAAACCAGACAAAGACTATACAGCAAAGAAAGAAAATTATAGACCAATATCTCTCATGAACATGGATTCAAAAATCTTCAATAAAATATTAGCAAACCGATTGAATACAAAGTTTAAAAAAACTATACACGATGACCAAGCGGGATTTATCCCCACCTCGAGTGGGGGTATGCAAGGCTGGATTCAAAATTTGCGAAAATCAATAAATGTAATCCATCACATTAACAGATTAATGAAGAAAAATAACATTATCATATAAATAGATGCAGAAAAAGCATTTGACAAAATTCATCACTTTTTTATGATAAAAACTCTCAGCAAACTAGGGATAGAGGGCACGTTTTTCAACTTGATAAGGAGTATCTATAAGAAACCTACAGCTAACATCATACTTAATGGTGAAAAACTAGAATCTATTATTTTTTCTTTTTACTAAAATAAAGAACAAACTAGAAATGGATGCCCTATCTCTCCACTACTTTTCAACATGGTGCTGGAAGTCCTAGCCAGTGCAATAAGACAGGAAAAAGAAATAAAAGGTATACAAATTGAAAAATAGAAACACAAATTGTCCTTTTTCACAGATGATATAATTGTCTATCCAACACACACACACGAAAACTCCATTATAATTGTACAAAATATAATTAAACCAAAACTCCCAGAACTTATAGATAATTTCAGCAAAGTTACAGGATATAAGATAAATATTCAAAAGCCAATAGCTTTCCTCTTCACCATCTTAAAATCTCAGATAAACAAACAATTAGAAATTCAAATTATAAAACACATTCCTTTTAAAATTAGTGCAAAAAAAATAAAATACCTACGAATAAACCTAACAAGGGATGTGAAGGACCTCTTCAAAGATAAGTATAAAACCTTTATGAGGGAAATAAAAGATGATCAAAACAAATGGAAGAACATTCCATTTTGCTCATGGGTAGGAAGAATCAATATCGTGAAATTGGCAATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGCCTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAGTGAAAAGAAAACCCGCATCGCCAAGAAAGTACTAAGCCAAAAGAATAAACCTGGAGGCGAAAGAAGAGTCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAACTAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAACTCCGAATATATACAACTTTCTTGTTTATGACAACCCAGAATAAAACAAGCAAATTATTTGGACATGTATTATATGGGGAAAGGATTCACTATTTAATAAATGGAAAGGGAGGCTATTCTGCTAAGAAAACCAGCTAACTATACATTGTAAACAGATCAACCTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCTATATGGATTAAAGACAGATTAAACGTTAGACCTAAAACCAACATAAAAACCCTAGAAGAAAACCTAGAAGGAAAACATGGCATTACCATTCAGGTCATAGGCATGGGCATGGACTTCATGCCTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTACAGAATATATCCAGAATCTACAATGAACTCAAACTAATTTACAAGTCAGTAAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACTACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAACAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTGGAAATAGCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCAGAAAGACAAAAATTAAAAAGTTAAAAAATAACAAGTATTGGAGAAGATATAAAAAAAAAAGATATACCAAAAAAAATATAAAACATGCTACTAAAAATAAAAATGTA,ORF1 MACSE reconst added to beginning,L1ME3F.ORF1.hs1_chimp.marg,L1ME3F.ORF2.hs1_chimp.marg,0,1002,2386,6172,6280,108
L1ME3CZ,ATGAGAAGAAATCAGAAAAACAGTTCTGGTAATATGACAAAACAAGGTTCTTTAACACCCCCAAAAGATCATACCAGCTCACCAGCAATGGAATCAAACCAAGACAAAATCTCTGAATTGACAGAAAAAAGAATAAGGTCAAGAAAGTCAATTATTAAGCTAATCAAGGAGCCACCAGAGAAAGTTGAAGTCCAACTTAAAGAAATCAAGAACATGATACAGGATATGAAGGGAAAATTCTTCAGTGAAATAGACTGCATAAATAAAAAACAATCACAATTTCTGGAAATCAAGGACACACTTAGAGAAATGCAAAATCCTCTGGAAAGTCCCAGGAATAGAATCGAACAAGTAGAAGAAAGAAATTCAGAGTTCGAAGACAAGGTCTTCAAATTAACTCTATCCAACAAAGACAAAGAAAAGAAAATAAGATTAAAACATGAACAAAGCCTCCAAGAAATCTGGGATTATGTTAAATGACCAAACCTAAGAATAATCGGTGTTCCCGGGGAAGAAGAGGAATCTAAAAGTTTGGAAAATATATTTGGGGGAATAATCGAGGAAAACTTCCCCAGCCTTGCCAGAGACTTAGACATCCAAATACAAGAAGCACATAGAATACCTAGGAAATTCAACACAAATAGAACATTATCTAGGCAAATAGTAATCGAGCTATCTAAAGTCAAGAATAAAGAAAGAATCTTAAAAGCTGCGAGACAAAAGAACCAAGTAACCTATAAAGGAAAACTTATAAGATTAACAGCAGATTTCTCAGTAGAAACCCTACAAGCTAGAAAGGAGTGGGATGCCATATTTTGTGTGCTGAAACAAAAAAATTATCAGCCAAGAATTTTGTATCCAGCGAAACTAAGCTTCAAACATGAAAGAAAAATACAGTCTTTTCCAGACAAACAAATGCGGAGAGAATTCGCCACTACCAGGCCAGCACTACAAGAACTGCTAAAAGGAGCTCTAAATCTTGAATCTACATAAACACATCACAGTAAAAATGGAGAACACCCAAATACAAAGAGAAAAATTATAAAAGTATAAAAAAAAGAAAAACTAATTACTCAAAAGGAACAATTAGACTGACAGCATACTTGTGACCAAGAACAAGATAACAAAGTTAAATGGTATAAAATTGCAAAAGTAACAAATTAATTTTATTTTGGTTTAGAATTGTAGGCTAAATTACCATACAATAATGAAATAAAAGTATTCTGAAACCACGGAGAAATGAAGCTCTAAGTTTTTAACTCCTTTGCCTCAACTTGTCCAACGAAGAACTAGCTGGAAAAGAAAAAGAAATTGCCAGAAGCAATGGAGAAGAAAAAAATTACTCAACACACGCCAGACCAAACAGATGCTCACCGTTTGAATCAATGATAATGATGATAATACATGGGTCAACAAAAACAACATGTAACTGAAACTATAGTCAACAATTATCTGCAAACTTGTGCGATAGTGATAAGAATTAAAGCAAATCTCAAGCCAAACTACTGTCCAAGACGAAGACAGATTGAGTAATGACTAGTCTGACCTCCTTGCAATGAAATTTATAGCTTTAAATCAAGTAAAAGGAAGAAAAGAATAAAGAAAATTAAATCAATTCAATACCAAGTAGAAAAGTGTGGGTAAAGAAAAAGAGAAAAAAAATGCATAGTACACACCAGATAGATGCATAATACAAACAAATCAAAAAATCATAGGAACAACAATAAATATTAAAGTACTAAACTCACCAGTTAAAAAACAAATTCTCAAATTGGAAAAGATTAGAAAATCCAGCTAGAGAGACTTGTAAAATATTACAGCATAGAAGAGTTGTTAAAAAAAGAAAATAACTAAACAAGAAAAAACCTATCAATACTAACATTGAATGTAAATGGACTAAATTCTTCAGTTAAAAGATACAGAATGGCAGAATGGATAAGAATTAACCAAGACCCAACTATATGCTGCCTAAAGAAAATTCACCTAACATATAAAGACTCACATAAACTTAAGGTAAAGGGGTGGAAAAAGATATTCCATGCAAATGGGCACCAAAAGCGAGCAGGAGTAGCTATTCTTATATCAGACAAAACAGACTTTAAAGCAACAACAATTAAAAAAGACAAAGAAGGACATTATATAATGATAAAAGGGCTAGTCCAACAAGAAAATATCACAATCCTAAATATATATGCACCTAACACTGGAGCACCCAAATATATAAAGCAAATATTAATAGACCTAAAGAGAGAGATAGACCGCAACACAATAATAGTGAGGGACTTCAACACTCTACTTACAGCATTAGACAGATCATCAAGACAGAAAATCAATAAAGAAACAATGGACTTAAATTATAACCTGGAACAAATGGACTTAAAAGACATTCACAGAACATTCCATCCAACAACTTCAGAATATACATTCTATTCATCAGCACATGGAACATTCTCCAAGATAAACCATATGTTAGGCCACAAAACAAGCCTTAATAAATTTAAGAAAATTGAAATCATATCAAGTATTTTCTCAAACCACAATGGAATAAAACTAGAAATCAACTCCAAAAGAAACCTTCAAAACCATACAAATACATGAAAATTAAATAACATGCTCTTGAATGATCATTGGGTCAAAAATAAAATTAAGAAGAAAATTAATGAATGGAAATGTAAAAAATTACTTGAAACAAATGAAAATGGAAGCACAACATACCAAAACTTATGGGATACAGCAAAAGTAGTACTAAGAGGAAATTTTATAGCAATAAATGTCTACATCAAAAAAAGTGAAAGAGTTCAAATAAACAATCTAAGGTTGCACCTCAAGGAACTAGAAAAACAAAAACAAACCAAACCCAAACTCAGCAGAAGAAAAGAAATAGCAAAGATCAGAGCAGAAATAAATAAAATTGAAACAAAAAACACAACAAAAATAGAAAAGATAAATGAAACAAAAAGTTGGTTCTTTGAAAAGATAAATAAAATAAATAAACCATTAGCTAGATTAACCAAGAAAAGAAGAGAAAAAATCCAAATAAATAAAATTAGAAATAAAAAAGGAGATATTACAACTGATACCACAGAAATACAAAGGATCATTAAAGACTATTATGAACACCTTTATGCAAATAAATTAGAAAACCTAGAAGAAATGGATAAATTCCTGGACACATACAACCTACCAAGATTGAATCATGAAGAAATAGAAAACCTGAATAGACCAATAACAAGTAACAAGATAGAAATAGTAATAAAAAAATTCCCAACAAAGAAAGCCCAGGACCAAGTGGATTCACTGCTGAATTCTACCAAACATTTAAAGAAAAATTGGAATACCACTCCTTCTCAAACTATTCCAAAAATAGAGGAGGAAGGAATACTTCCAAACTCATTCTATGAAGCCAGTATTACCCTGATACCAAAACCAGAAAAAGACACAACCAAAAAAGTAGAAAACTATAGACCAATATCTCTGATGAATATTGATGCTAAAATCCTCAACAAAATACTAGCTAATCAAATTCAACAATACCTTAAAAAGATAATTCATCATGATCAAGTGGGATTTATCCCAGGGATGCAAGGATGGTTTAACATATACAAATCAATAAATGTGATACATCACATAAACAGAATGAAAAACAAAAATCATATGATCATTTCAATAGATGCAGAAAAAGCATTTGATAAAATTCAACATCCATTCATGATAAAAACTCTCAACAAAATAGGCATAGAAGGAACATGCCTCAACATAATAAAGGGCATCTATGACAAACCCACAGCTAATATCATATTGAATAAGGAAAAACTGAAAGCCTTTCCTCTTAGAACCAGAACAAGAAAAGGATGCCCCCTTTCACCGCTGTTATTCAACATAATACTGGAAGTCCTAGCCAGAGCAATTAGACAAGAGAAAGAAATAAAGGGCATCCAAATTGGAAAGGAAGAAGTCAAATTGTCCCTATTTGCAGACGATATGATCGTATATATAGAAAACCCTAAAAACTCAACAAAAAAGTTCCTAGATCTAATAAATGAATTCATTAAAGTTTCAGGATATAAAATAAATGTACAAAAATTAGTAGTACTTCTATACACCAACAGTGAACAATCTGAAAATCAAATCAAGAACACAATCCCATTTACAATAGCTGCAAAAAATATAAAAAAAATAGTAGAAATATACCTAACCAAGGAGGCGAAAGATCTCTACAAGGAAAACTACAAAATACTGCTGAAATAAATTAAAGATGACACAAATAAATGGAAAGATATCCCATGTTCATGGATTGGTAGAATCAATACTGTCAAAATGACCATACTGCCAAAAGCAATCTACAAATTCAATGCAATCCCCATCAAAATACCAACATCATTCTTCACAGAATTAGAAAAAAAAACAATTCTAAAATTCATATGGAACCAAAAAAGAGCCCACATAGCCAAAGCAAGACTAAGCAAAAAGAACAAACCTGGAGGCATCACACTACCTGATTTCAAACTATACTATAAGGCCATAGTCACCAAAACAGCATGGGACCTGTATAAAAATAAGCACGAAGACCAACTATGGAACAGAATGGAGAACCCAGAAATAAACCCAAATACTTACAGCCAACTGATCTTCAACAAAGCAAACAAAAACATAAAGTGGGAAAAGAACACCCTATTCAACAAATGGTGCTGGGATAATTGGCTAGCCACATGTAGGAGAAATATGAAACTGGATCCTTTACATCTCTCACCTTATACAAAAATCAACTCAAGATGGATCAAGGACTTAAATCTAAGACCTGAAACTATAAAAATTCTGGAAGATAACATTGGAAAAACCCTTCTAGACATTGGCTTAGGCTTAGGCAAGGATTTCATGACCAAGAACACAAAAGCAAATGCAATAAAAACAAAGATAAATAGCTGGGACAATTTAATTAAACTAAAGAGCTTTTGCACGGCAAAAGGAACAGTCAGCAGAGTAAACACACAACCCACAGAGTGGGAGAAAATCTTTACAATCTATACACCTGACAAAGGACTAATATCCAGAATCTACAATGAACTCAAACAAAACTTAATTAGCAAAAAACAAAAACAAACAAATCAAAACAAAATAAAAAACCTAAACAATCCCATCAAAAAGTGGACTAACAACATGAATAGACAGTTCTCAAAAGAAGATATACAAATGGCCAACAAACATATGAAAAATGCTCACCATCACTATATGATCAGGGAAATCCAAATCAAAACCACAATGCGATACTGCCTCACTCTTGCAAGAATGTCCATAATCAAAAAAATTAAAAAATACGTAGATGTTGGCATGGATGCTGTGAACAGGGAACACTTCTACACTGCTTGTAGGAATGTATTAACTAGTACAGCCACTATAGAAAACAGTGTGGAAATTCCTCATAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCTACCCAGAGGAAAATAAGTCATTATTCGAAAAAGATACTTGCACACACATGTTTATAGCAGCACAATTCACAAGTTGCAAAATCGTGAAGAACCAAACTAATCCGTGTCCATCAATCAATGAGTGGATAAAGAAACTGTGGGATACGTACAGTCTGACAACATTTATGTACAATTTGAAAAGTATGAAACGATGCAATATTCTGTATTTTTATGGGTTCATATGCAGTAAAAGTGTAAAACCTAGATTGGAAAATTACATACCAAATTCATGATAGTGGTTGCCTCTGGGCAAAAAGGTGGGGAATGGTATTGGGAAGGAGAACAAAGGGGACTTCATATAGGTCAGTAACATTATATAATAATATATTTTTAAATAAAAGATCTGAAGCAAATATGGCAAAGGAAATATTAACATTTGTTAATTCTAGGAGACAGGTACATGGGTGTTTATAATATTCTTCTTGCATTTTTCTGTATCTATAACTTTTTTTCTAAATAATAAAATTAAAAGA,ORF1 MACSE reconst added to beginning,L1ME3Cz.ORF1.hs3_orang.marg,L1ME3Cz.ORF2.hs4_gibbon.marg,0,984,1864,5616,5988,372
L1ME4B,TCCAAGATGGCTGAATAGGAACAGCTCTGGTCTGTAGCTCCCAGCGAGATCGAAGCAGAAGGCAGGTGATTTCTGCATTTCCAACTGAGGCACCTGGTTCATCTCACTGGGACTGGTTGGACAGTGGGTGCAGCCCACGGAGGGTGAGCCGAAGTGGGGCAGGGTGTCACCTCACCCACAAAGTGCAAGGGGTCAAGGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGACAGACTGTAGCTGGAGAAACAGTACACTCCTGACAAAATACTGCACTTTTCCCAACAATCTTGACAACTGAAAAAAAAGGAGATACACTCCCTTGCCTGGCTCAGTGGGTCACACGCCCATGGAGCCTTGCTCACTGCTAGCGCAGCAGTCTGAGATCAACCTGCAATGCTGCTGCTTGATGCGGGGAGGGGCGTCTGCCATTGATGAAGCTTGAGTAGCTCACAGCGTAAACAAAGCAGCAGAGAAGCTTAAACAGGGCAGAGCCCACCTCAGATCAGCAAAGCCTACAGCCTCTCTAAATTACCACCTCTGGGGACAGCACAAAGCAGAACAAAAAGAGAGCATTAAACCACCAAAGCAAACAGCTTCCACAGACTTAAACATACCTGTCTGACAGCTCTAAAGAAAGAAGTGGTTCTATCAACAGCTGAGAGACCCATAAATGTTCAAGATCAAAGAACCAAGAGAACACAACCTCAAGCAGGACCCTGAACCCCATGAAGCCTGACAGGGAGACACATCAAAAAAAGAGACAACCAACACTTCAAACAGGCAGGTGCCCTCTGGGACGAAGCTTCCAGAGGAAGGATCAGGAAGCAATATTTATTGTTCTGCAGCCTCCGCTGGTGATACCCAGGCAAACAGGGTCTGGGGTGGACCTCCAGCAAACTCCAACAGGCCTGCAGCTGAGGGGCCTGACGGTTAGAAGGAAAACTAACAAACAAAAAGGAAAAACAACAACATCAACAAAAACCCCTTCGAGCCAAAGAATCTAAATAACAGACTTCAACATCAGAACTTCCCTCTGTCTCAGCCCACCCAAATGAGAAAGAACCAGCACAAGAACACTAACAACTCAAAAAGCCAGAGTGTCTCCTTTCCTCCAAATGACTGCACCAGTTCCCTAACAAGGGTTCTTAACCAGGGTGGGATGGCTGCAATGGCAGAAATAGAATTCAGAACACGAATAGGAAGGAACATCATCAAGATTCAGAAGAACATTAAAACCAAATCTAAGGAAGCTAGGAATCACAATAAAACAATAAATGAGCGGACAGACAAGATAACTATTATAGAATAGAACATAACCAACCTGAAAGAGCTGAATAACACAATACAAGAATTTCACAATGCAATCACTAGTATTAACAGCAGAATAAACCAAGCTGAGGGAAGAGTCTCAGCACTTGAAGACTGGTTCTCTGAAATAAGACAGTCAGACAAAAATCAATTTTTAAAAAGAATAAAAAGAAATGAACAAAACCTACAAGAAGTATGGGATTATGTAAAGAGACCAAATCTACCAATCACTGGCATCCCTGAAAGGGAGGGGGAGAAAGCAAACAACTTAGAAAATATATTTCAGGATATCATCCATGAAAATTTCCTCAACTTTGCTAGAGAGGCCAACAGTCAAATTTAAGAAATACAGAGAACCCCTGAAAGATTCTACACAAGAAGATCACCCCCAAGACACATAATTGCCAGATTTTCCAAGGTCGAAATGAAAAAATTTTAAAGGCAGCTAGAGAAAAAGGGCAAGTTACATACAAAAGGATCCTCATCAGACTAACGGCAGACCTCTCAGCAGAAACCCTACAAGCTGTTAATAGAAGAGATTGGGAACCTATATTCAACATTCTTAAAGAAAAAAAATTTCAACCAAGAATTTCATATCCAGCCAAACTAAGCTTCCTAAGTGAAGAAGAAATAAAATCATTTTCAGATAAGCAAACGTTGAGGGACTTCATTACCACCAGACCTGCCTTACAAGCAATCTTGAAAAGAGTATTAAATATATAAAGGAAAGACCACTATAAGCTAATACAAAAACACAGCATAAAGCCCACAGAAACTATAAAGAAACTACATCAACAAGCAAACAAAACAAACAACTAATATCATGTGACAGGATCAAATTCAAACCACACAATGACAACCTTGAATGTAAATGGTCTAAATTCCCCAATTAAAAGACACAGACTGTCAAAATGATTTAAAAAAAAAAGAAAAAAAAAAACAAGACCCAACTCTCTGCTGTCTTCAAGAGACCCATCTCATGTGTAAAAACACACATAGGCTCAAAGTAAAGGGACGGAAAAAGATATACCATGTGAAAATGAAAAAACAAAAAAAAGCAGGGGTTGCTATCCTAATATCAGATAAAACAGACTTTAAACCAATAAAAATCAAAAGAGACAAAGAAAGCTTTTTTGTTATAAAGAGATCAATTCAACAAGAAGATATAACAATACTAAATATATATGCACCCAATACTGGAGCACTCAGATTCATAAAGCAAATATTTATAGACCTAAAGAGAGAAATAGACTCCCATACAATAATAATAGGGGACTTCAACACCCCACTTCAGGCATCAGTATTAAACAGATCAACAAGACAGAAAAATAACAAAGAAATACAGGACTTAAACATTAGCTCTAGACTAATTGGACCTAATAGACATTTACAGAAAACTCCACCCAACATCTACAGAATACACATTCTTCTCATCACCACATGGAACATATTCACTAAAATCGACCACATGTTTGGCCATAAAACAAGTCTCAACAAATTCAAAAAAATTGAAATCACAACAAACATTCTCTTTGACCACAGTGGAATAAAACTAGAAATCAATAACAAGAAAATTTTTCAAAACTACACAAAAACATGGAAAAATCTGAACAACCTGCTCCTGAATGACTACTGGGTAAATAATGAAATAAAGACAGAAATTAAAAAATACATTAAAATTAATGAAAATAGAGACACAACGAACCAGAATCTATGGAATACAGTTAAAGCAGTACTAAGAGGGAAGTTTATAGCACTAAATGCCCACATAAGAAAAATAGAAAGATCTAAAATAAACAAACCTAACCTAACACCTCAATGGACAGTAAAAAAGAAGAAAAATAAAAAAACAAAACCCAAAGTAAGCAAGGAGAAAGAAATAACTAAGATCAGAGCAGAACTGAATGAAACAGAGACTTAAAAAACAGTACAAAAAATCAATGAAACCAAGAGTTGGTTTTTTGAAAAGATAAACAAAATGGATAGACCACTAGCAAGACTAAAAAAAAAAAGAGAGAAGACTCAAATAAATGCAATCAGAAATGAAAAAGGAGATATTATAACCGATACCACAGAAATACAAAGGATCATTAGAGACTATTATGAACAACTATATGCAAACAAATTAGAAAATCTAAGAAAATTGGAAAATTTCTTGAAAAAATAAACCTTCCCAGATATGAACCAGGAAGAAATAGAAAATCTGAACAGACCAATAACAAGTACTGAGATTAAATCAGAAATAAGGTAAATACCAACTAAAAAAATACAAAGACCAAATGATCAGATGACATGTTACTGTGAATTCACAGTTGAATTTTACCAAAAATTTAAAGAAGAACTGATACCAATTCTCCTGAAACTATTCCAAAAAATAGAAAAAGAAGGAATCCTCCCTAACTCATTCTATGAGGCCAGCATTATCCTGATACAAAAATCTGGCAGAGACACAATAAAAAAAGAGAACTTTAGGCCAATATCCCTGATGAACATAGATGCAAAAATCCTCAATAAAATACTAGCAAACCAAATCCAGCAGCACATCAAAAAGACTATCCACCAAAACCAAGTAATGAGATTCATCCCAGGAATGCAAGGATGGTTCAACATACGCAAATCAATAAATGTGATACATCACATCAAAACAGAACCAATGACAAAAACCACATGATCATCTCAATAGATGCAGAAAAAGCATTTGATAAAATTCAACATCCTTTCATGATAAAAAAAACTCTCAACAAATTAGGTATAGAAGGAATATACCTCAACATAATAAAGGCCATTTATGACAAACCCACAGCTAATATCATACTGAATGGGCAAAACCTGAAAGCCTTTCCTCTAAGAACTAGCACAAGATAAGGAATGCCCACTTTCACCACTTTTATTCAACATAGTACTGGAAGTTCTAGCCAGAGCAATTAGGCAAGAGAAAGAAATAAAGGGTATCCAAATTGGAAAAGAGGAAGTCAAATTGTCTCTGTTTGCAGATGACATGATTTTATATTTAGAAAAACCTAAAGTCTCCACCAAAAAACTCTTTAAGCTGATAAGCAAATTCAGTAAAGTTGCAGGATACAAAATCAACATACAAAAATCAGTGGCATTTCTATACACCAATAATGAACAAACTGAAAGCCAAATCATGAATGAACTCCCATTCAGAATTACTACAAAGAGAATAAAAGAAACAAAAAAACCCTACCTAGGAATAAATCTAACAAAAGAGGTGAAAGATCTCTACAATGAAAACTACAAACCACTGCTCAACGAAATAAAAGAGGACACAAACAAAAATTGGAAGACAATTCCAAGTTCGTGGATAGGAATAATTAATGGTATCGCGAAAATGATTATACTGCCCAAGGCAATCTACAGATTTAGTGCTATTCAACACAACTCCATCAAACTACCATTGACTTTCTTCACAGAAATAGAAAAAAAATACCTAATGTTTAAATCTAAAATGGAACCAAAAAAGAGCCTGAATAGCCAAAACAATCCTAAGCAAAAAGAACAAAACCTGAAGGGCATCACGTTACCTGACTTCAAACCATACTACCTGACAAAGTGTGAAATTACCTTACAAAGTCATATCAACCAAAATAGCATAACTAAAACAGCTTGGTACTGGTACAAAAACAGACATATAGACTAACGGAACAGAATAGATACCCCAGAAATAACTCCACATATCTGCAGTCATCTGATCTTTGACAAACATGACAAGAACAAAAATTGGGGAAAGGACTCTCTATTTAATAAATGGTGCTAGGAAAATTGGCTAGCCATATGCAGAAGAATGAAACTAGATCCCTATCTCTCACTGTATACAAAAATTCCATCAAAAAGGGAAATTAAAGACTTAAATGTAAGACCTAAAACTATAAAACCAGTAGAAGAAAACCTTCACAAAACCCTTCAGGACATTGGCCTGGGCAAAGATTTTATGGCTAAGACCTCAAATAAAGCAAAGGCAACAAAAGCAAAAATAGACAAATTGGATTATATCAAACTAAAAAGCTTCTGCACAGCAAAAGAAACTATCATCAGAGTGAAGAGACAATCTACAGAATGGGAGAAAATATTTGCAAACTATCCATCTGACAAGGAACTAATATCTAGATAGAATCTGTAAAGAACTTAAACAACTTAACAACAAAAAAACACATAACCCAACAAAAAAATTGGCAAAGGATCTCAATATGCATTTCTCAAAAGATAGCATACAAATGGCCTCC,ORF1 and ORF2 replaced with MACSE reconstructions,L1ME4b.ORF1.hs6_sqmonkey.marg,L1ME4b.ORF2.hs0_human.marg,1054,2067,2137,5552,5555,3
L1ME3G,AAATAAGACCTCGGGAAAGAATCAGCAGTATCACCAGTCTATGCATATTGCAGGGCCGACAGACTTCACATAGATAACCCCGCCAAAATATAGAAGAACAGTGATTACTCCTTACAAAGAGCCAAAATTAACAAAGACTGATTCTATTCCTCAGACTGGAACAACTATTCGTATCAATTAGAAAGTAAAATACCTATTACAACCAACAGGGCAAAATATTGCTGTGAGATAAACAAAAAAGAGGATTTCTCACAAAAACGGGGATATATAAAAAGACTACATCTAAATAATGAGATAGTGTTTCAAATTAAAATTAAGGCCAACTTCTGACAAGACTGACACAAACACAAGACAACAAAAATCTGATAGAAACACAGAAATGTTCAGTACCAATCTTTTAAATTTTATAAAATATGGCACTCTCTTTACAATCAGCTAATATGCATAGAGTGAAATAAAAAAAACAAAAGAGTATAAAGAAATAAGGCAACAAACAAAATCAACCCCAAAAAAGAACAGTATTAGAAGTTTTAACAATGGTAATTAAAATAATTGAAAACTTGACTAGATAGGTAAAAAAATCTGCATGATCTCAAAGACCTAGAGACTGTCATATGAGACTATTTCTCATTTTTTATTAAGAAAATAAAATGAAAATTCTTGAGATGAAAAATACAGTATCTAAGATGAAAAATACATTGGATAGGCTCAATGGCAAATTAGAGACAGCAGGAGAAAAAATTAGTGAACTTGAAGACATGTCTATAGAAAATTTTCAAAAAGTAAAACGAAAGAAAAAATAATTTATAAAATGTTCAGAGCATCAGAGACCTATGGGACAACATCAAGTATTATAAACTGTGTGTAATCCAACAATCACACTAGCTCACCAGCAATGGATCCAAACCAAGAAGAAATCCCTGATTTACCTGAAAAAGAATTCAGGAGGTTAGTTATTAAGCTAATCAGGGAGGCACCAGAGAAAGGCGAAGCCCAATGCAAGGAAATCCAAAAAATAATACAAAAAGTGAAGGGAGAAATATTCAAGGAAATAGATAGCATAAATAAAAAAAAATCAAAACTTCAGGAAACATTGGACACACTTATAGAAATGCAAAATGCTCTGGAAAGTCTCAGCAATAGAATTGAACAAGTAGAAGAAAGAAATTCAGAGCTCAAAGACAAGGTCTTTAAATTAACCCAATCCAACAAAGACAAAGAAAAAAGAATAAGAAAATATGAACAAAGCCTCCAAGAAGTCTGGGATTATGTTAAACAACCAAACCTAAGAATAATCGGTGTTCCTGAGGAAGAAGAGAAATCTAAAAGTTTGGAAAACATATTTGGGGGAATAATCAAGGAAAACTTCCCCAGCCTTGCTAGAGACCTAGACATCCAAATACAAGAAGCACAAAGAACACCTGGAAAATTCATTGCAAAAAGATCATCACCTAGGCACATTGTCATCAGGTTATCTAAAGTTAAGACGAAGGAGAGAATCTTAAGAGCTGTGAGACAAAAGCACCAGGTAACCTATAAAGGAAAACCTATCAGATTAACAGCAGATTTCTCAGCAGAAACCCTACAAGCTAGAAGGGATTGGGGCCCTATCTTCAGCCTCCTCAAACAAAACAATTATCAGCCAAGAATTTTGTATCCAGTGAAACTAAGCATCATATATGAAGGAAAGATACAGTCTTTTTCAGACAAACAAATGCTGAGAGAATTTGCCACTACCAAGCCACCACTACAAGAACTGCTAAAAGGAGCTCTAAATCTTGAAACAAATAAAAAATATTAAAGGAAGGTCTTTTAAAGCCTAAGGAAAATAATACCAGATGCTAATATGAATCTATACGAAGAAATGAAGAGTATCAGAAATGGGAATGGGTTGGCTTATTTGTAAATATATAAATAAGTTTTTTCATATTCTACTTTTAACCTCTTTAAAAGACATAAAATTGTTTAAATCCAAATTAATAACAATGTACTGTGGTGTTTATAAAATATATATAGGTAAAATGTATGACAATAAGAGCACAAAAAATTGAGAAGAGAAAAGAATTATACTATTGCAAGATTTTTAAACTATAGGGAAAGTGGTATAATATTACTTGAAGGTAGACTGTGGTAAACTAAAGATGTATATTGTAATTTCTAAAGCAATAACTAAGATAATAAAACCAAAAGGTATAAATAATAAACAAATAAAGTAAATAAGAAGAAATTGTAAAAAATAATTACATTAAATCAAAGAGTAGACAGAAAAATATAAAAGATGGAAAAAACAAATAAGAAAAAGGACAAAACAAAATTAGAATATATGAATGGAATAGTACCTCACATCTCAATACTAACATTGAATGTAAATGGCCTAAATGCTCCACTTAAAAGATACAGAATGGCAGAATGGATAAGAATTCACCAACCAACTATCTGCTGCCTTCAAGAGACTCACCTAACACATAAGGACTCACATAAACTTAAGGTAAAGGGGTGGAAAAAGGCATTTCATGCAAATGGACACCAAAAGCGAGCAGGAGTAGCTATTCTTATATCAGACAAAACAAACTTTAAAGCAACAGCAGTTAAAAAAGACAAAGAGGGACATTATATAATGATAAAAGGCCTTGTCCAACAGGAAAATATCACAATCCTAAACATATATGCACCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTAATAGACCTAAGAAATGAGATAGACAGCAACACAATAATAGTGGGGGACTTCAATACTCCACTGACAGCACTAGACAGGTCATCAAGACAGAAAGTCAACAAAGAAACAATGGATTTAAACTATACCCTGGAACAAATGGACTTAACAGATATATACAGAACATTCCATCCAACAACTGCAGAATATACATTCTATTCAACAGCACATGGAACTTTCTCCAAGATAGACCATATGATAGGCCACAAAACAAGCCTCAATAAATTTAAGAAAATTGAAATTATATCAAGCACTCTCTCAGACCACAGTGGAATAAAACTGGAAATCAACTCCAAAAGGAACCTTCAAAACCATGCAAATACATGGAAATTAAATAACCTGCTCCTGAATGATCATTGGGTCAAAAATAAAATCAAGATGGAAATTAAAAAATTTTTTGAACTGAACGACAATAGTGACACAACCTATCAAAACCTCTGGGATACAGCAAAGGTGGTGCTAAGAGGAAAGTTCATAGCCCTAAATGCCTACATCAAAAAGTCTGAAAGAGCACAAATAGACAATCTAAGGTCACACCTCAAGGAACTAGAGAAACAAGAACAAACCAAACCCAAACCCAGCAGAAGAAAGGAAATAACCAAGATCAGAGCAGAACTAAATGAAATTGAAACAAACAAAAACAAAATACAAAAGATAAATGAAACAAAAAGCTGGTTCTTTGAAAAGATAAATAAAATTGATAGACCATTAGCAAGATTAACCAAGAAAAGAAGAGAGAAAATCCAAATAAGCTCAATAAGAAATGAAACAGGAGATATTACAACTGACACCACAGAAATACAAAAGATCATTCAAGGCTACTATGAACACCTTTATGCACATAAACTAGAAAACCTAGAAGAGATGGATAAATTCCTGGAAAAATACAACCCTCCTAGCTTAAATCAGGAAGAAATAGATACCCTGAACAGACCAATAACAAGCAGCAAGATTGAAATAGTAATTAAAAAATTACCAACAAAAAAAAGTCCAGGACCAGACGGATTCACAGCTGAATTCTACCAGACATTCAAAGAAGAATTGGTACCAATCCTATTGACACTATTCCACAAGATAGAGAAAGAAGGAACCCTCCCTAAATCATTCTATGAAGCCAGTATCACCCTAATACCAAAACCAGGAAAGGACATAACCAAAAAAGAAAACTACAGACCAATATCCCTGATGAACATAGATGCTAAAATCCTTAACAAAATACTAGCTAACCAAATCCAACAACATATCAAAAAGATAATCCACCATGATCAAGTGGGTTTCATACCAGGGATGCAGGGATGGTTTAACATACACAAGTCAATAAATGTGATACACCACATAAACAGAATTAAAAACAAAAATCACATGATCATCTCAATAGATGCAGAAAAAGCATTTGACAAAATCCAGCATCGCTTTATGATTAAAACTCTCAGCAAAATTGGCATACAAGGGACATACCTCAATGTAATAAAAGCCATCTATGACAAACCCACAGCCAACATAATACTGAATGGGGAAAAGTTGAAAGCATTCCCTCTGAGAACTGGAACAAGACAAGGATGCCCACTCTCACCACTCCTCTTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCCAAATCAGTAAAGAGGAAGTCAAACTGTCACTGTTTGCTGATGATATGATCGTTTACCTAGAAAACCCTAAAGACTCCTCCAAAAAGCTCCTAGAACTGATAAAAGAATTCAGCAAAGTTTCCGGATACAAAATTAATGTACACAAATCAGTAGCTCTGCTATACACCAACAGCGACCAAGCTGAGAATCAAATCAAGAACTCAACCCCTTTTACAATAGCTGCAAAAAAAAAAAAAATAAAAAAACATAAATACTTAGGAATATACCTAACCAAGGAGGTGAAAGACCTCTACAAGGAAAACTACAAAACACTGCTGAAAGAAATCATAGATGACACAAACAAATGGAAACACATCCCATGCTCATGGATGGGTAGAATCAATATTGTGAAAATGACCATACTGCCAAAAGCAATCTACAAATTCAATGCAATCCCCATCAAAATACCACCATCATTCTTCACAGAATTAGAAAAAACAATCCTAAAATTCATATGGAACCAAAAAAGAGCCCGCATAGCCAAAGCAAGACTAAGCAAAAAGAACAAATCTGGAGGCATCACATTACCTGATTTCAAACTATACTATAAGGCCATAGTCACCAAAACAGCATGGTACTGGTATAAAAATAGGCACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAACCCAAATACTTACAGCCAACTGATCTTTGACAAAGCAAACAAAAACATAAAGTGGGGAAAGGACACCCTTTTCAACAAATGGTGCTGGGATAATTGGCTAGCCACATGTAGGAGAATGAAACTGGATCCTCATCTCTCACCTTATACAAAAATCAACTCAAGATGGATTAAGGACTTAAATCTAAGACCTGAAACTATAAAAATTCTAGAAGATAACATTGGAAAAACCCTTCTAGACATTGGCTTAGGCAAGGATTTCATGACCAAGAACCCAAAAGCAAATGCAATAAAAACAAAGATAAATAGCTGGGACCTAATTAAACTAAAAAGCTTTTGCATGGCAAAAGGAACAGTCAGCAGAGTAAACAGACAACCCACAGAGTGGGAAAAAATCTTCACAATCTATACATCCGACAAAGGACTAATATCCAGAATCTACAAGGAACTCAAACAAATCAGCAAGAAAAAAACAAACAATCCCATCAAAAAGTGGGCTAAGGACATGAATAGACAATTCTCAAAAGAAGATATACAAATGGCCAACAAACATATGAAAAAATGCTCAACATCACTAATGATCAGGGAAATGCAAATCAAAACCACAATGCGATACCACCTTACTCCTGCAAGAATGGCCATAATCAAAAAAATTAAAAAAACAATAGATGTTGGCATGGATGTAGTGAACAGGGAACACTTCTACACTGCTGGTGGGAATGTAAACTCTTACACCAACTATAGAAAACAGTGTGGAGATTCCTTAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCTACCCAGAGGAAAAGAAGTCATTATATGAAAAAGATACTTGCACACGCATGTTTATAGCAGCACAATTCGCAATTGCAAAAACGTGGAACCAACCCAAATGCCCATCAATCAATGAGTGGATAAAGAAACTGAAACCATTAAAAAAATAAAAAGACAAGCCAAATAATTAGGAGATATATTTGTAAATTATACATTGAATAAAGAAATTATATCCATAATATATAAACAACTATTAAAAATCAATAATAAGAATAAAAGCTGAATTAAAAAA,ORF1 and ORF2 replaced with MACSE reconstructions,L1ME3G.ORF1.hs3_orang.marg,L1ME3G.ORF2.hs3_orang.marg,869,1789,2324,6012,6152,140
L1ME5,AAAAAAAAAACAACAGAAAAACTGGAAACACGAAAAAACAAAGCACCTCAACACCCCAAAAAAAACACACCACCTCAACAGCAACGGAACAAAACTGGACGCAAAAAGAAATCCACAAGCTAACAAAAAAAGAATTCAGAAGATCAAATAACAAGCAAATAAGGGAGGCAACACAAAAAAAAAAAAAACAAGGCAAAAAAATCCAAAAAAAGATAGAAGAAGGGAAGGGAGAAATAACCAAAAAAATAAATACAATTAAAGAAAAAACAATAAAAGAGATGAAGGAAACACTGGAAACAAAGACACGAGAAATACAAAAAGAACGCAAAAGCCTCAGCAACCGAAGCGAAAAACTAAAAGAAAGAAAATCAGAAATGGAAGACAAAATCAATGAAATAAACCAAGAAAGAAAAAACAAAGAAAAAAGAATAAAAAAAAACGAACAAAGCCTCCAAGAAATATGGGACTACGTGAAAAAACCAAACCTAAGAATAATTGGTGTACCTGAAAGTGAAGAAGAGAATGCAAAAAACTTAGAAAACACACTGGAGAAAATAATCAAAGAAAACTTCCCCAACCTAGCAAGACACCCAAACAACCAAACTCAAGAAACACAAAGAACACCACAAAAATACACCGCAAAAAGAGCAACTCCAAGACACATAATCATCAGATTAACCAAAGTTAAAACAAAGGAAAAAATCTTAAAAGCAGCCAGACAGAAACACCAGGCAACCCACAAAGGAAAACCCATCAGACCAACACCAGATCTCTCAGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGCCCAATATTCAACATCCTTAAAGAAAAAACAAATTATCAACCAAGAATTTCATATCCAGCAAAACTAAGCATCATAAATGAAGGAAAAATAAAATACTTCACAGACAAACAAATGCTGAGAAAAGTTACCACCACCAAGCCACCACTAAAAGAACTCCTAAAAGAAGCGCTAAACATGGAAACAAACAAAACCGGTAACAGCCGCTGCAAAATCATGCCAAAAATGAAAGAAAAAAAAATTAAGGAAAAAATAAAAGAACTATGTTAATCATGAATAAAATAATTTTATCTGGTAAAATTATGTTGTTTCTAAGAAATATTTTAAAAAAAAAAAAATTTAAATATTTTTATCACATTAGAGTGAGGAACCAAAGGGAAATAAATGTGTGCTAGTGTACTTGTCTTTTTTAAAGAGTCAATGTGTATGCAGATACGGTTTAAAATATCAATAGTGGTAAACAAATTTATAGAATACAGCTTAATTTACAATGTTAGGGTAAATTAGAATGTTTAAATTTTAAGCCAAGAGAAGAAATCTAGCCAATGGAAAGCAGTAACGAGGGAAAAAAGGAGTAAAAAAAGTAAATGAAAAAACATAAAACAGGGAAAAGAAACGTGTCCTAACGTATATAGTGCTAAACGTATATATTTAAAAGTAACTGATTCAAAGAATCTATAGAGGAAATACTTAATATGAAAGATCACGAACTGGTTGAACATTTTAAAAATGGGAAATTATATATGTTCAAATCAAAAAAACTTGAGTAATAATCCCAATTACTGACAAAATAAAATTTAAGCCAAATATATTGTGAACCCCTAAGAAGGAATTACATACTTGTAAAAGGAAAAAAAAAATCAAGAATATATATCATCAAAAAGCTATCTACTCCTAAATTTAGATCCCCAAAAGGAGCAAAATATATAATAGAGATGAAAAAAAATAAATAAATAATGAAATCATCAAATTTACCTGGAGATTGTTACCATTTTCATCTAAATAAAAATAATATATCAAACATATAAGTAATCAGTGGAGATATTGAAGATTTGAATAATACAGTTTGATTTTTACATATGTATAGAACTCTTCCCAGTAAATACTAAAAATTTTATAAAAAAAATAGACCAAAGTTTAGGCCATAAAACAAGCCTTAATGAAGTTCAAGTGATCAATATCAATATCGTGTTCTCTGATTACAATGCAACAAAACCAAAATTAGTGACAAAATATTGGTTTAAATATATGATATTTCAGGAAAAGGCCAAAACATATGCCAGAATAATCCTTTGATAAAAAATGAAATAAAAAGGAGTAAAGAAACATTTGATGAATGCAATGGTATCTCACATCTCAATACTAACATTGAATGTAAATGGCCTAAATGCTCCACTCAAAAGATACAGAACCGCAGAATGGATAAGAGTTCACCAACCAACCATCTGCTGTCTTCAGGGGACTCACCTAACACATAAGGACTCACATAAACTTAAAGTAAAGTGGTGGAAAAAGATATTTCATGCAAATGGAGAACCAAAAAGAGCAGGGGTACCAGCTATATAAATATGAGACAAAATATGCTTTAAGACAATAACTGTGAAAATGAGCCACAAAGGTCATTATATAATGATAAAATGCATGATTTTTCAGGAGAATATAACAATTGTAAATATATATGCATCTGACATAGGAGCACCTAAATTAAATAAACAAAACATAAATAGATCTCTAAGGAGAAAGATAGACTGTAAAAAAGAGATAATAGGGAAGTTCAATACTTTACTTTCAGCAATAAACAGATCACCAAGACAGAAAATCAGTAAGGAAATGTCAGCCTTAAACTACATTTTAGAAAAAATGGACCTAATAGACATATACAGAACATTCTATACAAAAGCAATAGAGTACACATTCATCTCAAGTATACATGGAATATTCTTGAGGGTAGGTCATATGTTAGGCCCTAAAATAAGCCTTAATAAACTTTAAAAAATTCAAATCATATCAAGTCTCTTATCTGACCAAAATGGCATAAAACTAGAAACCAATTATAAGGGATACCTGAAAATTCACACAAATACATGGAAATTAAACAACATGCTCCTAAATAAGCAACGGGTCAATAAGAATGAATTAAAAAAGAAAATCAATAAATATTTTGAACCGAATGACAATGAAAACACAACATATCAAAACTTATGGGATACAGCAAAGACAGTACTAAAAGGAAAATTTATAGCAATAAATGCCTACATCAAAAAAATTGGAAGGTATCAAATAGACATAACAATGTTATACACCAAAGATCTAGAAAAAGAAAGATTGATACATACCAAGCACAAAGTCAGAAGAAAAGAGGAAATAAACAAGAAGATAAGAGCAGAATTAATAAATGAAATAGAGACTAAAAGTAAAATAAGAAAGGTTAACCAAAACAAAGGTTGAAGGTTATTCTTTGAAAAGATAAATAAAGTTGATAAAACTTTATATAGGCTAACCAAGAAAAGAATAAGAAATAAAATTAATAAAAAGAATAAGAAAAAAGAATAAGGAGATATAACAGCAGATACTACTGAAATACAAAAGATCATAAAAGACTACTATGAGCAATTATACACCAACAAATTAGAAAATCTGGAGGAAATAGACTATTTCCTAAAAAATTACAACATACCAAAATCAAATCAAGAAGAAATAGAGAATATGAATAGACCAATAATAAGTAAGGGGATTGAAATGGCTAAATGGGTAATAAAAAATCTACCATCAAAGAAAAGCCCAAGACAAGAGAGATACAAAGCAGAAAACCACTCCAGAATTGGATGGTTCTACAACGTGAGTTCCCAAACATTTAAGGAAGAATTAATGCCAATCCTATACACACTCTTCCACAAGAAAATAGAAGAGGAAGAAATACTTCCAAACTCATTTTATAAGGCCAGCATTACCCTAATACCAAATCCAAAATTCAAAAAAGGACATTTTAATAAAATAAAATTACACACCAATCTTCCTGTTGAAGATAGAGGTGAAAATTCTCAACAAAATACTAGCAAACTAATCCAACAACATATTAAAAGGATCATTCACTATGATCAAGTAGGATTTAGGGGTATTCTAAGGATGTAAGGACGGTTCAACATATGCAAATCTATAAATGTGATATATCACATTAACAGAATGAAAGAGAAAACCCACATGATCATCTTAGTAAATGCAGAAAAAGCATTTGACAAAATCTAACAAACTTTTATGATAAAAATACTGAACAAATTAGGTGTAGAAGAAATGTATCTGAACATAATAAAGGCTATATATGACAAACTCACAGCTAGCATCATACTCAATGGTAGAAAAGTTGAACACTTCTCCTCTAAGTTCAGAAATAAAACTAGAATAACCTCTCTTGCCACTTCTATTGAATACAGAACTGGAAGCTCTAGGCAGAGCAATTTGGCAAGAGAAAGAGAAAAGAAGCAACAAAGTGGAAAGGAAAAAGCAACACAAGTGAAAGCAGGAATTTCCCTGTTTGCAAATAACAGGATATGACATTTTCTTAAAACCCTAAATACTCCACCAAAAGAAAAGACTGCTAAAACTGATTTAAGTAAAACAGTCTAATTAGTGAGATGCATAAAATCCAATTTAGGACAAAAAGCAGTAGCCCTTCTGTACACTAACAATGAACTAACCCCCCCAAAAAACAAATCAAGAAAACAATCCCATTTACAATACCTCCAAAAAAGTAAAATATTTAAAAATAAATTTAAACCAAAAGAGATGAAATATCTGCACACTGAAAACTATAAAACATTCATGAAAAAAATTGAAGAAGACAAACAAACAAATGGAAAGATATTCCATGTTCATGAATTGAAAGAAATAATATTGTTAAAAAATGTGCATACTACCCAAAGCTATCTACAGATTCAATCCAATCCCTACCAAAATTCCAATGATGTTTTACACAGCAATAGACAGAACAATCCTAAAATTTGTGCGAAGCCACAAAAGACTCTGAATAACCAAAGCACAATGGAGCTGAAATTTAATAAAGCTGAAGGCATCACACTATGTGACTTCAAAATATATTACAAACCTATAGCAATCAAAACAGCATGCTTCTGGCATAAAAACAGACATATAAATCAATGGAACAGGATGGAAATCCCAGAAATGAATGAACACATTTTCTCTCAATTGATTTTCAACAAAAGTGCCAAGAACATGCAGTGGATAAAGGACATATCTTTAATAACTAATTATGGACAAACTAGAATATCCACATGCCAAAAAATGAAATTAGACCCCTACTTCATGCCATATATAAAAATCATCCCAAAATTGATTAAAAACATAAGATCTGAAACTATGAAATTACTAGAAGAAAACATAGGAGGAAAGCTCTATGAAATTTGGGCAATAATTTTTAATTTTGGAAATGAACCCAATAGTACAGGCAACACAAGAAAAAAAAAAATACACAAGTGGGATTACATCAAACTAAAAATGTCTACACAAGAAATAAAACAGCAGAATGAAGAGACAACCTACGGAATGGTAAAGAAAATATTTCCAAACCATACATCTGATAAGGGTTTAATATTCAAAATATGTAAGAAACTCAAACAAATCTCAATAGAACAAAAACAAATAACTCAATTTAAAAATAGGCAAGAGAAGATGTAGGGACAGATCTCTCAAGCATACTACTGGATCTACAAGGGGCAACATGTAATACTTAGTCCAATATTATTTATATAAATTAAAAATATATATATACACATAAAACAATTCTACATTTTATAGGGATACCTAAAAATTTGAGTGTAGATCTTAAATGCATTAGAAATGTTGACATCATTGTGTGGGGAGAAGATGGGGATTAGTGGATTAGAAATGAAAAAAAAGTAAATAAATAAGTAAAATAAGAGGTAAAACTAAATTTAAAACAGAATCCATGAACCAATAATGATACTGTGCCATAAACTCAGGCATTAAATACACTCAGTTATATGCACTTGAAATCTAAAAAAAT,ORF1 MACSE reconst added to beginning,L1ME5.ORF1.hs1_chimp.marg,L1ME5.ORF2.hs3_orang.marg,0,1034,2138,5495,5847,352
L1ME4A,AAAATGGCGGATGGGAGACAGGACTAGATTGCAGCTCCCACTCAGATAGACAGAGCAGCATGCAGAAGCTCACATTTTTAACTTTTGCCCCAAGATCAACTGCAGGAACATACCAGGAAAACTGAGAGGGCCCACAGACCCTCTGAAGGAAGCAGACTGGTCCTGCAGGACCCAGGAGACACCCCAAATACTGCAAGTGCCGAAGTTGGAAAGGGACACCCTTCTCTCCCGATCACACACACACCACTGGAGAAGCTGAAGGTCTGTTTGTGGGAGATGTTTCTGACTTTACCTGGAGCTGAGTCAATTTAGAGAGCCAAGCAAAATACAGAGGAGAGGAAGCAGCAGAAAGACCCTGGGGGCTCACTGCACCCCCTAGCAGCCCATTCCTGCCTGGCACCACAGGTATCCATCAGGAGGGTGACCAGAGGAGCAAGGGGTAAACCACAGGGAGAAGGAAATCTCTAGCTGAACTTTGTAACAATTTGAACAGGGCAAGAAGCCTCCTGGCCAGAACTCATGGGAGGGCGAAAATCTGGTGTGCAGACTCCACAGGTGGGGGAAGAACCAAGCCCTTTTCTTTTGCAGCTGGGAAGAGGATAGCCCAGGGCAAGTTTTCAGCCCCTCACGCCCTCCGCCAGGAAACAGACTCTGCGCTGTTGGAGGGGACACAGTGGGAGTGAGACTGGCCCCTTGGTTTGCATGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCCACTTCCCTGACAACCAGCATGACTCAGCAGAGGCAGCCATAATCCTCCTAGGTACACAACTCTAGTGACCTGGGAATCTCACACCCATACCTCACAGCAGCTGCAGCAAGACCCGCCCAAGGAGAGGCTGAGCTCAGATACACCTAACCCCGCAACCACCTGATGGTCTTTCCCTACCCACCCTGGCAGCGGAAGACAAAAGACATAATATCTTGGGAGTTCTAGGGTCCCCGCCCTCAACCTGAGAAAGCTGAGTGCTCCTCCAGGTGACCGTAGGGGAAGGTTGTATCCTCCCCATACTACTACAGCTGATGCTTTCTTGAAAGCGCCCCCCCCCTGGATGAAGCCTACCAAAACCAAACTGTAACATAGCAACTCATAAAAGAACAACACTGCCCCAAGAAAGGAGAAAACAACAGCTAATTTCACCACCTGTAACATCCTGGCTAACCAGAGGTCCTGAGTCTTTCCATGTGACAACTTTACTGCCAGCACAACCAGCATTCAAGAAAAGCAGTGCACTAAACAAAACCATAGCTAAGAACCCTCATGGAGTCCATTTCACACCCCGGCTACCTCCACCGGAGCAGGTGCTGGTATCCATGGCTGAGAGACCCATAGATGGTTCACATCACAGGACTCTGTGCAGACAACCCCCAGTACCAGCCCAGAGCCTGGTAGCCTTGCTGGGTGGCTAGACCCAGAAGAGAGATAACAATCACTACAACTCGGCTCTCAGGAAGCCACATCCATTAGGAAAAGGGGGAGAGTACTACATCAAGGGAACACCCCATGGAACAAAAGAATCTGAACAACAGACCTTCAGCCCTAGACCTTCCCTCTGACAGAGCCTACCCAATGAGAAGGCACCAGAAAACCAACTCTGGTAATATGACAAAACAAGGTTCTTTAACACCCCCAAAAAATCACACTAGCTCACCAGCAATGGATCCAAATCAAAAAGAAATCCCTGATTTACCTGAAAAAGAATTCAGGAGGTTAGTTATTAAGCTAATCAGGGAGGCACCAGAGAAAGGTGAAGCCCAATGTAAGGAAATCCAAAAAATGATACAAGAAGTGAAGGGAGAAATATTCAAGGAAATAGATAGCATAAATAAAAAACAATCAAAACTTCAGGAAACAATGGACACACTTATAGAAATGCAAAATGCTCTGGAAAGTCTCAGCAATAGAATTGAACAAGTGGAAGAAAGAAATTCAGAGCTTGAAGACAAGGTTTTCGAATTAACCCAATCCAACAAAGACAAAGAAAAAAGAATAAGAAAATATGAACAAAGCCTCCAAGAAGTCTGGGATTATGTTAAACGACCAAACCTAAGAATAATTGGTGTTCCTGAGGAAGAAGAGAAATCTAAAAGTTTGGAAAACATATTTGGGGGAATAATCGAGGAAAACTTCCCTGGCCTTGCTAGAGACCTAGACATCCAAATACAAGAAGCACAAAGAACACCCGGGAAATTCATTGCAAAAAGATTATCGCCTAGGCACATTGTCATCAGGTTATCTAAAGTTAAGACGAAGGAAAGAATCTTAAGAGCTGTGAGACAAAAGCACCAGGTAACCTATAAAGGAAAACCTATCAGATTAACAGCAGATTTCTCAGCAGAAACCCTACAAGCTAGAAGGGATTGGGGCCCTATCTTCAGCCTCCTCAAACAAAACAATTATCAGCCAAGAATTTTGTATCCAGTGAAACTAAGCTTCATAAATGAAGGAAAGATACAGTCTTTTTCAGACAAACAAATGCTGAGAGAATTCACCACTACCAAGCCACCACTACAAGAACTGCTAAAAGGAGCTCTAAATCTTGAAACAAATCCTCTTTAAAGCATAAATCTCACAGGACCTATAAAACAATAATACAAGTTAAAAAACAAACAAGGTATACAGGCAACAAATAGCATGTGAATGGAACAGTACCTCACATCTCAATACTAACATTGAATGTAAATGGCCTAAATGCTCCACTTAAAAGATACAGAACTGCAGAATGGATAAGAATTCACCAACCAACTATCTGCTGCCTTCAGGAGACTCACCTAACACATAAAGACTCACATAAACTTAAAGTAAAAGGATGGAAAAAGGCATTTCATGCAAATGGAAACCAAAAGAGAGCAGGGGTAGCTATTCTTATATCAGACAAAACAAACTTTAAAGCAACAGCAGTTAAAAAAGACAAAGAGGGACATTATATAATGGTAAAAGGCTTTGTCCAACAGGAAAATATCACAATCCTAAACATATATGCACCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTAATAGACCTAAGAAATGAGATAGACAGCAACACAATAATAGTGGGGGACTTCAATACTCCACTGACAGCACTAGACAGGTCATCAAGACAGAAAGTCAACAAAGAAACAATGGATTTAAACTATACCTTGGAACAAATGGACTTAACAGATATATACAGAACATTTCATCCAACAACCACAGAATACACATTCTATTCAACAGTGCATGGAACTTTCTCCAAGATAGACCATATGATAGGCCACAAAATGAGCCTCAATAAATTTAAGAAAATTGAAATTATATCAAGCACTCTCTCAGACCACAGTGGAATAAAACTGGAAATCAACTCCAAAAGGAACCTTCAAAACCATGCAAATACATGGAAATTAAATAACCTGCTCCTGAATGATCATTGGGTCAAAAATGAAATCAAGATGAAAATTAAAAAATTCTTTGAACTGAATGACAATAGTGACACAACCTATCAAAACCTCTGGGATACAGCAAAGGTGGTGCTAAGAGGAAAGTTCATAGCCCTAAATACCTACATCAAAAAGACTGAAAGAGCACAAACTGACAATCTAAGGTCACACCTCAGGGAACTAGAGAAACAAGAACAAACCAAACCCAAACCCAGCAGAAAAAAGGAAATAACCAAGATCAGAGCAGAACTAAATGAAATTGAAACAAAAAAAATACAAAAGATAAATGAAACAAAAAGTTGGTTCTTTGAAAAGATAAATAAAATTGATAGACCATTAGCAAGATTAACCAAGAAAAGAAGAGAGAAAATCCAAATAACCTCAATAAGAAATGAAACGGGAGATATTACAACTGACATCACAGAAATACAAAAGATCATTCAAGGCTACTATGAACACCTTTATGTGCATAAACTAGAAAACCTAGAAGAAATGGATAAATTCCTGGAAAAATACAACCCTCCTAGTTTAAATCAGGAAGAATTAGATACCCTGAACAGACCAATAACAAGTAGCAAGATTGAAATGGTAATTAAAAAAATACCAATAAAAAAAAGTCCAGGACCAGATGGATTCACAGCAGAATTCTACCAGACATTCAAAGAAGAATTGGTACCAATCCTATTGACACTATTCCACAAGATAGAGAAAGAAGGAACCCTCCCTAATTCATTCTATGAAGCCAGTATCACCCTAATACCAAAACCAGGAAAGGACATAACCAAAAAAGAAAACTACAGACCAATATCCCTGATGAACATAGATGCTAAAATCCTTAACAAAATACTAGCTAACCAAATCCAACAGCATATCAAAAAGATAATCCACCATGATCAAGTGGGTTTCATACCAGGGATGCAGGGATGGTTTAACATACACAAGTCAATAAATGTGATACACCACATAAACAGAATTAAAAACAAAAATCACATGATCATCTCAATAGATGCAGAAAAAGCATTCAACAAAATCCAGCATTCCTTTATGATTAAAACTCTCAGCAAAATTGGCATACAAGGGACATACCTCAATGTAATAAAAGCCATCTATGACAAACCCACAGCCAACATAATACTGAATGGGGAAAAGTTGAAAGCATTCCCTTTGAGAACTGGAACAAGACAAGGATGCCCACTCTCACCACTCCTCTTCAACATAGTACTGGAAGTCCTAGCCAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCCAAATCAGTAAAGAGGAAGTCAAACTGTCACTGTTTGCTGATGATATGATCATTTACCTTGAAAACCCTAAAGACTCCTCCAGAAAGCTCCTAGAACTGATAAAAGAATTCAGCAAAGTTTCTGGATACAAAATTAATGTACACAAATCAGTAGCTCTTCTATACACCAACAGCGACCAAGCAGAGAATCAAATCAAGAACTCAACCCCTTTTACAATAGCTGCAAAAAATAAAAAAAAAAAATACTTAGGAATATACCTAACCAAGGAGGTGAAAGACCTCTACAAGGAAAACTACAAAACACTGCTGAAAGAAATCATAGATGACACAAACAAATGGAAACATCCCATGCTCATGGATGGGTAGAATCAATATTGTGAAAATGACCATACTGCCAAAAGCAATCTCCAAATTCAATGCAATCCCCATCAAAATACCACCATCATTCTTCACAGAATTAGAAAAAACAATTCTAAAATTCATATGGAACCAAAAAAGAGCCTGCATAGCCAAAGCAAGACTAAGCAAAAAGAACAAATCTGGAGGCATCACATTACCTGACTTCAAACTATACTATAAGGCCATAGTCACCAAAACAGCATGGTACTGGTATAAAAATAGGCACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAACCCAAATACTTACAGCCAACTGATCTTCGACAAAGCAAACAAAAACATAAAGTGGGGAAAGGACACCCTTTTCAACAAATGGTGCTGGGATAATTGGCTAGCCACATGTAGGAGAATGAAACTGGATCCTCATCTCTCACCTTATACAAAAATCAACTCAGGAGGATTAAGGACTTAAACCTAAGACCTGAAACTATAAAAATTCTAGAAGATAACATTGGAAAAACCCTTCTAGACATTGGCTTAGGCAAGGATTTCATGACCAAGAACCCAAAAGCAAATGCAATAAAAACAAAGATAAATAGCTGGGACTTAATTAAACTAAAGAGCTTTTGCAACGCCAAAGGAACAGTTAGCAGAGTAAACAGACAACCCACAGAGTGGGAGAAAATCTTCACAATCTATACATCTGACAAAGGACTAATATCCAGAATCTACAACAAACTCAAACAAATCAGCAAGAAAAAAACAAACTAATCCCATCAAAAAGTGGGCTAAGGACATGAATAGACAATTCTCAAAAGAAGATATACAAATGGCCAACAAACATATGAAAAAATGCTCAACATCACTAATGATCAGGGAAATGCAAATCAAAACCACAATGTGATACCACCTTACTCCTGCAAGAATGGCCATAATTAAAAAATTAAAAAAACAGAGATGTTGGCATGGATGCGGTGATCAGGGAACACTTCTACACTGCTGGTGGGAATGTAAACTAGTACAACCACTGTGGAAAACAGTGTGGAGATTTCTTAAAGAACTAAAAGTAGAACTACCATTTGATCCAGCAATCCCACTACTGGGTATCTACCCAGAGGAAAAGAAGTCATTATATGAAAAAGATACTTGCACACATGTTTATAGCAGCACAATTCACAATTGCAAAATCATGGAACCAACGCAAATGCCCATCAATCAAAGAGTGGATATAGAAACTGTGTAT,ORF1 and ORF2 replaced with MACSE reconstructions,L1ME4a.ORF1.hs5_gmonkey.marg,L1ME4a.ORF2.hs0_human.pars,1601,2581,2668,6337,6340,3
L1ME4C,GCAGCCAAGGGACTGAGATGACTAGGGCACTCGTAACAGAACTTCAGAAGGATGGTACTGAGGGGAAGACATAGAAGCTGGGCTGAAGGAGGAGGAAGCTGGGAACCCTTCATGGGGCTGCCTGGCACCAGAACTCATTCCTTACTCCTGACTACGGGGGAATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCATGAGCTTCTAGAGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACAAGGGAGTGCCAGACAGTGGGCGCAGGACAGTGGGTGCAGCACACCGTGCACGAGCCGAAGCAGGGTGAGGCATTGCCTCACTTGGGAAGCGCAAGGGGTACCAGGGAGTTCCCTTTCCTAGTCAAAGAAAGGGGTGACAGACGGCACCTGGAAAATCGGGTCACTCCCAAGTGGTCTTGCCCCTAATACTGGCTGGTCTGACCTGAGAACCCCGTGGGCTGCTGATGTCTGCTTTTCCAACGGGCTTAAAAAACGGCCTTGGTTACACCAGGAGATTATATCCCGCACATGGCTCGGAGGGTCCATGCCTGACCAGCAGACTACGCCCACGGAGTCTCACTGACCATCCACTAGCCCACTGGCTCCTTGCTGGCACAGCAGCTTCCTCCAGTCTGAGATCAAACTGCAAGGTGGCTTTTCCAGTAAGCGAGGCTGGGGGAGGGGCGGCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCCAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCGCTGCCAGACCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAATGTCCCTGTCTGACAGCTTTGAAGAGAGCAAAACTAGGCACAGAGAACAGCGGACCCTTCCTCATCGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAATGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACCCCTGACCCCTGAGCAGCGTAACTGGGAGGGACCCCCCAGTAGGGGCAGACTGACACCTCACACGGCCGGGTACTCCTCTGAGACTGTGGTGAAAACTTCCAGAGGAACGATCAGACAGCAGCATTCTAGCACCCTGCTGCGGTTCATGAAAATCCGCTGTTCTGCAGCCACCGCTGCTGTTACCCAGGCAACCAGGGTCTGGAGAGGGTGGATCCTCCTGCCATCGCACTATGAAATGCACTACTCTGATGGACCTCTAGCAAACTCCAGAGTGTAGTTACTACTGGTCCCAAAACAGACCTGCAGCTGAGGGTCCTGTGTTCTTAACTTAGAGGAGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACAGAGTTAGAGAATGGAGTCCAGGAGTTGGGGGCTGAGCATTGGCCCCCTAAAATCTTCAAGATACAAAGCTCCAAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTCATGAAATAGGATAAGATAAAAACCACAAAGATGGCAACTTCAAATAATGAAGAAACATCAGCTCACCAAGATGGGGGAAAAAAAACAGAGCAGAAAAACTGAAAACTCTAAAAAGCAGAGTGCCTCTCCTCCTCCAAAGGAACGCAACTCCTCACCAGCAACGGAACAAAGCTGGACGGAGAATGACTTTGACGAGTTGAGAGAAGAAGGCTTCAGACGATCAAACTACTCCGAGCTAAAGGAGGAAATTCAAACCAAAGGCAAAGAAGTTAAAAACCTTGAAAAAAAATTAGACAAATGGATAACTAGAATAACCAATACAGAGAAGTCCTTAAAGGACCTGATGGAGCTGAAAACCAAGGCACAAGAACTACGTGAAGAATGCACAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGTGATGGAAGATCAAATGAATGAAATGAAGCGAGAAGAGAAGTTTAGAGAAAAAAGAATAAAAAGAAACAAACAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGAAACAAGTTGGAAAACACTCTGCAGGATATTACCCAAGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACATTCAAATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACTCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAACCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAGGAACAACCGGTACCAGCCACTGCAAAAACATGCCAAATTGGTAAAGACCATCGAGGCTAGGAAGAAATTGCATCAACTAACGAGCAAAATAACCAGCTAACATCATAATGAATGGAATGGTACCTCACATCTCAATACTAACATTGAATTTAAATGGCCTAAATGCTCCACTTAAAAGATACAGAACTGCAGAATGGATAAGAATTCACCAAACGACCATCTGCTGCCTTGTAAGAGACTCACCTAAATACATAAGGACTCACATTAAACTTAAGGTAAAGGTGTGGAAAAAGACACTATGCAAATGGACACCAAAAGCAAGCAGGAGTAGCTATTCTTCTATCAGACAAAACAAACTTTACAGCGGTAAGAGCAGTTTAACAAAAGACAAAGAGGGACATTATATAATGGTAAAAGGCCTTGTTCAACAGGAAAATATCACAATCCTAAACATATATGCCCCTAACACTGGAGCTCCCAAATTTATAAAACAATTACTAATAGACCCAAGAAATGGATAGATAGACAGCAACACAATAATAGTGGGGAACTTCAATACTCCACTGACGGCACTAGACAGGTTATCAGGACAGAAAGTCAACAAAGAAACAATGGATTTAAACTATACCTTGGAACAAATTGACTTAACAGATATATACAGAACATTCCATCCAACAACTGCAGAATATACATTCTATTAAATAGCACATGGAACTTTCTCCAAGATAGACCATATGATAGGCCACAAAACGAGACTCAATAAATTTAAGGTCAAAAGTATCTTAAGTACTGTCTCAGACCACAGTGGAATAAAACTGGAAATCAACTCCAAGGAGAATTTGACACAGTGGGCATGGGCATGTGAAGAAAAGAAGAAAGAAAAAAAAAACAAAAGGAACCTTCAAAACCATGTAAATACATGGAAATTAAATAACCTGCTCCTAAATGATCACTGGGTCAAAAATGAAATCAAGATGGATATTAAAAAATTATTTGACCTGAACAACAATGGTGACACAACCTATCAAATCCTCTGGGATACAGCAAAGACGGTGCTAAAAGGAAAGTTTATAGCCCCAAACGCCTACAGCAAAAAGACTGAAAGAGAACAAACAGACAATCTAAGTGTCACACCTCAAGGAACTAGAGAAACAAGAACAAACGAAACCCTAACCAACAGCAGAAGAAAGGAAATAACCAAGATCAGAGCAGAGCTAAATGAAATTGAAACAAACAAACAAATAAATAAAATCATTACAAAAGATAAAACAAAAAGATGGTTCTTTGAAAAGATAAATAAAATTGATAGACCACTAGCAAGATTAACCAAGAAAATAAGAGGAAAAATCCAAATAAGCTCAATAAGAAATGAAATGAGAGATATTACAACTGACACCTACAGAAATACAAAAGATCATTCAAAGCTACTAAATGAACACCTTTATTTGCATAAACTAGAAAACCTAGAAATGATGGATACATTACTGGAAAGATACTACCCTCCTAGCTTAAATCAGGAAGAATTAGATACCCCGAACAGTTCAAAAACCAGCAGCGAGATTGAAATGGTAATTAAAAATCTATCATCAATAACAAAGAAAATCCAAGGCCCGAATGATTTTCCGCATGAATTCTACAAACATTTTAAAGAAAAATTAGTACCAATCCTATTGACACTATTTCAAAAAATAGAGTTAGTTAAAGAGGGAATACTCCCTAAATCATCCTATGAGGCCAAGATTACCCTAATACCAAAACCAGGCAAGGACATAAAGCCAAAAAATAAAACTAGATGATCAATATCCCTGATGAACATACATGCAAAAATCCTTAACAAAATACTAGCAAACCAAATTCAACAATATATTGAAAATATAATCCACCATGATCAAGTTGGTTTCATGCCAGGGATGCAAGGATGATTTAACATTCTCAAATCAATAAATATGTAAATACACCACATAAACAAAATTAAGGACAAAAATTATATGATCATCTCAATAGATGCAAAAAAAAAAGCATTCAATAAAATCCAGCATCCCTTTATGATAAAAATTCTCAGCAAAAAACTCAACATACAAGGGACATACCTAAACGTAATAAAAGCCATCTATGACAAACCCACAGCCAACATCATACTGAATGGGAAAAAGTTGAAAACATTTCCTCTGAGAACTGGAACAAGACAAAGATGCTCACTCTCACCACTCCTCTTCAATGTAGTACTGGAAGCCTTAACCAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCCAAATTGGAAAAGAGGAGGTCAAACTGTCACTGTTCTCTGATGATATGATCGTCTACCTAGAAAACCCTAAAGACTCCTCCAGAAAGCTCCTAGAACTGATACATGAATTCAGCAAAGTTTCCAGATACAAAATTAATGTACACAAATCAGTAGCTCTTCTATATGCCAACAGCCACAAAGCTGAGAAACAAATAAAGAACTCAACCCCTTTTACAATAGCTGCAAAAAATAAAAATAAAATACTTAAAAATATACCTAACCAAGGAGGTGAATTAAGACCTCTACAAGGAAAACTACAAAATACTTTGATTGATGAAATAAATCATAAGATGACACAAACAAATGGATGGAACACATCCCATGCTCATGAATGGGTAGAATCAATATTGAATGAAAATGTCTACATTGCCAAAAGCAACCTACAAATTCAATGCAATTCTCATCAAAATACCACCATCATTCTTCACAGAATTAGAAAAAAAACAATTGTAAAAAATCTCATGTGGAACCAAAAAAGAGTCCGCATAGCCAAAGCAAGACTAAGCAAAAAGAACAAATCTGGAGGCATCACATTACATGATTTCAAAATATACTATAAAGCTACAGTCACCAAAACAACATGGTACTTGTATAAAAATAGGTACATAGACCAATGGAAAAAGAATAGAGAAACCAGAATAAATAAACTCAAATACTTACAGCCGTTCGAGATCTTTGACAAAGCAAACAAAAACATAAAGTGGGGAAAGGACACCCTTTTCAACAAATGGGAGTGCCGGGATAATTGGCTAGCCAAATGTAGGAGAATGAAACTGGATCTTCATCTTTCACCTTATATAACAAAAATCAACTCAAGATGGATTAAGGACTTAAATCTAAAATCTGAAACTATAAAAATTCTAGAAGATAACATTGGAAAAACCCTTCTAGACATTGACTTAGGCAAAGATTTCTTGACCAAGAACCCAAAAGCAAATGCAACAAAAACAAAGATAAATAGCTGGGACTTAAATAAGCTAAAGAGCTTTTGCATGGCTAAAGGAACAGTCAGCAGAGGAAACAGACAATCCTGCTTGACAGAATGGGAGAAAATCTTCACAATCGGACCACGAAAAAAACTAATATCCGGAATCTATAAGAGAACTCAAACAAATCAGCAAGAAAAAAAACAAACAGATAATCCCATCAAAAAGTGGGCTAAGGACATGAATATACAATTCTCAAAAGAAGATATACAAATGGCCAACAAATATATGAAAAAATGCTCAACATCACTAATGATCAGGGAAATGGAAATCAAAACCACAATGCAATATCACCTTACTCCTGCAAGAATGGCCATAAAATCAAAAAATCAAAAAAACAGTAGATGTTGGCGTGGATGCAGTGAACAGGCAACACTTCTGCACTGCTGGTGGGAATGTAAACTAGTATACAACTGTAGAAAAAAAATGTGGAGATTCCTTAAAGAACTAAAAGTAGAACTTATATTTGATCCAGCAATCCCGCTACTGGGTATCTACCCAGAGGAAAATAGGTCATTTTACGAAAAAGATACTTGCACACGTGTGTTTATAGCAGCACAATTCGCAATTGCAAAAACGTGGAACCAACCCAAATGCACATCAATAAACAAGTGGATAAAGAAACTGC,ORF1 and ORF2 replaced with MACSE reconstructions,L1ME4c.ORF1.hs3_orang.marg,L1ME4c.ORF2.hs6_sqmonkey.marg,1587,2600,2667,6489,6490,1