globaldothealth/list-1.9.1.zip
The previewer is not showing all the files.
globaldothealth-list-f5a6a7d
.dockerignore
344 Bytes
.github
ISSUE_TEMPLATE
bug_report.md
669 Bytes
feature_request.md
595 Bytes
workflows
aggregate-ci.yml
1.2 kB
aggregate-deploy.yml
1.3 kB
api-python-tests.yml
744 Bytes
completeness.yml
747 Bytes
curator-api-node.yml
1.3 kB
curator-service-package.yml
2.3 kB
curator-ui-node.yml
1.4 kB
data-service-node.yml
1.2 kB
data-service-package.yml
2.0 kB
export-deploy.yml
1.6 kB
export-tests.yml
1.3 kB
freshness.yml
782 Bytes
geocoding-service-package.yml
2.1 kB
geocoding-service-python.yml
1.2 kB
ingestion-cleanup-deploy.yml
2.2 kB
ingestion-functions-deploy.yml
2.2 kB
ingestion-functions-python.yml
1.3 kB
integration-tests.yml
1.8 kB
monitoring-notify.yml
879 Bytes
monitoring-tests.yml
798 Bytes
prune-uploads-dev.yml
864 Bytes
prune-uploads-prod.yml
939 Bytes
prune-uploads-tests.yml
1.0 kB
suggest-python.yml
823 Bytes
update-dev-curator-db-schema.yml
893 Bytes
update-prod-curator-db-schema.yaml
1.0 kB
.gitignore
7.1 kB
CODE_OF_CONDUCT.md
3.4 kB
CONTRIBUTING.md
3.4 kB
LICENSE
1.1 kB
PROCESS.md
1.9 kB
README.md
7.2 kB
api
R
.gitignore
624 Bytes
gdh.r
2.9 kB
README.md
3.0 kB
python
gdh.py
2.8 kB
requirements.txt
16 Bytes
test_gdh.py
563 Bytes
aws
README.md
19.1 kB
cluster.yaml
487 Bytes
curator-ingress-config-map.yaml
610 Bytes
curator-ingress.yaml
1.2 kB
curator.yaml
6.9 kB
dashboard.yaml
381 Bytes
data.yaml
3.1 kB
display_dashboard_token.sh
149 Bytes
letsencrypt.yaml
1.3 kB
location.yaml
4.2 kB
common
tsconfig.json
5.5 kB
data-serving
README.md
9.4 kB
data-service
.eslintignore
197 Bytes
.eslintrc.js
1.0 kB
.prettierrc.js
112 Bytes
Dockerfile
1.6 kB
README.md
610 Bytes
api
openapi.yaml
45.0 kB
jest-mongodb-config.js
122 Bytes
jest.config.js
301 Bytes
nodemon.json
126 Bytes
package-lock.json
965.8 kB
package.json
3.0 kB
src
controllers
case.ts
44.5 kB
home.ts
215 Bytes
preprocessor.ts
12.7 kB
geocoding
README.md
3.1 kB
geocoder.ts
1.3 kB
remoteGeocoder.ts
775 Bytes
index.ts
6.4 kB
model
admin.ts
584 Bytes
case-reference.ts
1.5 kB
case-revision.ts
560 Bytes
case.ts
6.7 kB
date-range.ts
319 Bytes
date.ts
317 Bytes
demographics.ts
855 Bytes
event.ts
475 Bytes
exclusion-data.ts
419 Bytes
fields.json
1.6 kB
genome-sequence.ts
602 Bytes
location.ts
2.4 kB
pathogen.ts
438 Bytes
positive-int.ts
183 Bytes
preexisting-conditions.ts
423 Bytes
range.ts
56 Bytes
revision-metadata.ts
1.3 kB
source.ts
419 Bytes
symptoms.ts
359 Bytes
transmission.ts
447 Bytes
travel-history.ts
380 Bytes
travel.ts
557 Bytes
unique-strings-array.ts
295 Bytes
vaccine.ts
632 Bytes
variant.ts
216 Bytes
server.ts
465 Bytes
types
appmetrics-dash.d.ts
105 Bytes
util
case.ts
16.3 kB
logger.ts
533 Bytes
search.ts
3.9 kB
validate-env.ts
935 Bytes
test
controllers
case.test.ts
72.3 kB
home.test.ts
426 Bytes
preprocessor.test.ts
25.2 kB
geocoding
lyon.json
1.2 kB
remoteGeocoder.test.ts
1.3 kB
index.test.ts
594 Bytes
mocks
handlers.ts
639 Bytes
model
admin.test.ts
579 Bytes
case-reference.test.ts
1.7 kB
case.test.ts
3.2 kB
data
case-reference.full.json
388 Bytes
case-reference.minimal.json
149 Bytes
case.events.json
751 Bytes
case.full.json
5.2 kB
case.minimal.json
913 Bytes
case.mustgeocode.json
740 Bytes
date-range.full.json
54 Bytes
date-range.minimal.json
2 Bytes
demographics.full.json
197 Bytes
demographics.minimal.json
2 Bytes
event.full.json
138 Bytes
event.minimal.json
31 Bytes
genome-sequence.full.json
304 Bytes
genome-sequence.minimal.json
2 Bytes
location.full.json
397 Bytes
location.minimal.json
167 Bytes
pathogen.full.json
41 Bytes
pathogen.minimal.json
41 Bytes
preexisting-conditions.full.json
170 Bytes
preexisting-conditions.minimal.json
2 Bytes
revision-metadata.full.json
292 Bytes
revision-metadata.minimal.json
125 Bytes
symptoms.full.json
91 Bytes
symptoms.minimal.json
2 Bytes
transmission.full.json
100 Bytes
transmission.minimal.json
2 Bytes
travel-history.full.json
812 Bytes
travel-history.minimal.json
2 Bytes
travel.full.json
580 Bytes
travel.minimal.json
2 Bytes
date-range.test.ts
1.1 kB
date.test.ts
1.7 kB
demographics.test.ts
2.1 kB
event.test.ts
891 Bytes
genome-sequence.test.ts
1.4 kB
location.test.ts
2.3 kB
pathogen.test.ts
1.5 kB
positive-int.test.ts
1.1 kB
preexisting-conditions.test.ts
779 Bytes
revision-metadata.test.ts
2.5 kB
symptoms.test.ts
619 Bytes
transmission.test.ts
657 Bytes
travel-history.test.ts
655 Bytes
travel.test.ts
559 Bytes
unique-strings-array.test.ts
714 Bytes
vaccine.test.ts
547 Bytes
variant.test.ts
379 Bytes
util
case.test.ts
39.1 kB
search.test.ts
3.9 kB
tsconfig.build.json
138 Bytes
tsconfig.json
234 Bytes
samples
cases.json
135.4 kB
scripts
aggregate
README.md
791 Bytes
aggregate
Dockerfile
286 Bytes
app.py
10.3 kB
geocoding_countries.json
15.4 kB
poetry.lock
30.0 kB
pyproject.toml
467 Bytes
tests
casecount-aggregate.json
244 Bytes
jhu-02-02-2022.csv
559.5 kB
regions-aggregate.json
1.1 kB
test_app.py
4.9 kB
convert-data
README.md
6.3 kB
__init__.py
0 Bytes
constants.py
6.4 kB
convert_data.py
7.2 kB
converters.py
14.0 kB
geocode_util.py
5.8 kB
logger.py
194 Bytes
move_notes.py
2.4 kB
parsers.py
11.7 kB
requirements.txt
50 Bytes
tests
__init__.py
0 Bytes
test_geocode_util.py
4.5 kB
utils.py
1.6 kB
export-data
Dockerfile
213 Bytes
Dockerfile_full_export
176 Bytes
README.md
3.6 kB
citation.txt
1.3 kB
common.sh
297 Bytes
country_export.sh
747 Bytes
data_dictionary.txt
7.4 kB
fields.txt
1.5 kB
full_export.sh
1.3 kB
logger.py
194 Bytes
setup_country_export.sh
1.9 kB
setup_full_export.sh
1.1 kB
submit_job.sh
265 Bytes
test_transform.py
4.0 kB
test_transform_mongoexport.csv
2.4 kB
test_transform_mongoexport_expected.csv
2.6 kB
test_transform_mongoexport_expected.json
5.6 kB
test_transform_mongoexport_expected.tsv
2.6 kB
test_transform_mongoexport_header.csv
1.5 kB
transform.py
10.6 kB
prepare_fields_list
package-lock.json
647 Bytes
package.json
742 Bytes
src
index.ts
574 Bytes
tsconfig.json
6.8 kB
prune-uploads
README.md
4.7 kB
hooks
aggregate.py
1.4 kB
country_export.py
3.0 kB
tests
test_country_export.py
915 Bytes
logger.py
194 Bytes
prune_uploads.py
11.7 kB
requirements.txt
83 Bytes
test_prune_uploads.py
5.8 kB
setup-db
.eslintignore
197 Bytes
.eslintrc.js
1.1 kB
.eslintrc.json
413 Bytes
.gitignore
1.8 kB
.prettierrc.js
124 Bytes
README.md
859 Bytes
manual-migration-helpers
README.md
287 Bytes
batch_countries.js
3.7 kB
batch_dates.js
1.4 kB
package-lock.json
1.5 kB
package.json
596 Bytes
patch_countries.js
4.2 kB
patch_countries_prod.js
2.0 kB
migrate-mongo-config.js
1.3 kB
migrations
20210902121948-initial.js
1.4 kB
20210922082905-additional-case-indexes.js
929 Bytes
20211105174857-source-countrycodes.js
779 Bytes
20211109102327-denormalise-confirmation-date-1875.js
1.7 kB
20211119115728-additional-case-indexes.js
1.0 kB
20211119121032-additional-user-indexes.js
344 Bytes
20211124131839-drop_redundant_indices.js
4.1 kB
20211204203100-fix-byDateIfListed.js
831 Bytes
20211206230903-add-sgtf.js
691 Bytes
20211222101904-iso-country-codes.js
912 Bytes
20220104213515-sgtf-to-string.js
751 Bytes
package-lock.json
121.8 kB
package.json
1.3 kB
schemas
README.md
276 Bytes
cases.indexes.json
5.8 kB
cases.schema.json
13.6 kB
sources.indexes.json
349 Bytes
sources.schema.json
4.9 kB
dev
.vscode
settings.json
1.0 kB
Dockerfile
2.3 kB
Dockerfile-batch
229 Bytes
Dockerfile-ingestion
2.3 kB
Dockerfile-mock-source-data
2.3 kB
Dockerfile-test
2.2 kB
Dockerfile.bak
129 Bytes
README.md
9.7 kB
docker-compose.ci.yml
306 Bytes
docker-compose.dev.full.test.yml
3.9 kB
docker-compose.dev.full.yml
4.2 kB
docker-compose.dev.yml
1.4 kB
docker-compose.yml
2.5 kB
iam_role.json
155 Bytes
make_superuser.sh
497 Bytes
mock_source_data.py
5.3 kB
parsing.py
10.3 kB
poetry.lock
61.5 kB
pyproject.toml
430 Bytes
run_e2e_tests.sh
336 Bytes
run_full_stack.sh
295 Bytes
run_session.py
4.5 kB
run_stack.sh
298 Bytes
setup_db.sh
338 Bytes
setup_ingestion.py
7.6 kB
setup_localstack.py
7.4 kB
test_all.sh
1.4 kB
test_e2e.py
11.3 kB
test_full_stack.sh
331 Bytes
update_deps.sh
708 Bytes
wait_for_services.py
646 Bytes
docs
Makefile
188 Bytes
README.md
866 Bytes
data_landscape.md
4.4 kB
images
dataflow.png
41.5 kB
deployment.png
180.2 kB
src
dataflow.puml
2.2 kB
deployment.puml
1.5 kB
geocoding
location-service
.dockerignore
156 Bytes
Dockerfile
708 Bytes
README.md
4.8 kB
api
openapi.yaml
4.5 kB
doc-images
chrome-cookies.png
1.0 MB
firefox-cookies.png
1.0 MB
safari-cookies.png
479.9 kB
poetry.lock
43.8 kB
pyproject.toml
1.2 kB
run_tests.sh
83 Bytes
src
__init__.py
0 Bytes
app
admins_fetcher.py
2.3 kB
fake_geocoder.py
431 Bytes
geocoder.py
4.8 kB
geocoder_suggester.py
1.6 kB
main.py
3.6 kB
integration
mapbox_client.py
947 Bytes
test
__init__.py
0 Bytes
lyon.json
1.2 kB
test_admins_fetcher.py
3.2 kB
test_fake_geocoder.py
766 Bytes
test_geocoder.py
2.8 kB
test_main.py
958 Bytes
test_suggestions.py
994 Bytes
ingestion
from_spreadsheet
Linelist_data_to_merge.ipynb
46.7 kB
README.md
586 Bytes
ghtransfer_15012020.R
2.4 kB
linelist_data_to_merge.py
2.9 kB
requirements.txt
1.0 kB
functions
.dockerignore
7.0 kB
.env
181 Bytes
Dockerfile
2.2 kB
Dockerfile-clean
2.3 kB
Dockerfile-test
2.0 kB
README.md
34.6 kB
assets
new-automated-source.png
79.8 kB
new-source-id.png
80.3 kB
system.svg
33.7 kB
aws.py
19.1 kB
aws_access
EventBridgeClient.py
9.5 kB
S3Client.py
1.1 kB
ScheduleRuleTests.py
6.6 kB
__init__.py
0 Bytes
globaldothealth_configuration.py
390 Bytes
clean_old_ingestion_source_files.py
2.0 kB
common
__init__.py
0 Bytes
common_lib.py
7.1 kB
common_lib_test.py
4.8 kB
geocoding_countries.json
15.4 kB
ingestion_logging.py
395 Bytes
input_event.json
395 Bytes
parsing_lib.py
22.2 kB
parsing_lib_test.py
26.0 kB
sample_data.json
817 Bytes
define_rules.py
3.0 kB
docker-compose-test.yml
195 Bytes
docker-compose.yml
286 Bytes
make_rules.py
1.4 kB
parsing
GISAID
make_GISAID_df.py
3.6 kB
USA
USA.py
7.2 kB
USA_test.py
1.9 kB
__init__.py
0 Bytes
input_event.json
261 Bytes
sample_data.csv
260 Bytes
argentina
__init__.py
0 Bytes
argentina.py
14.6 kB
argentina_test.py
9.1 kB
dictionaries.json
97.4 kB
input_event.json
244 Bytes
sample_data.csv
3.3 kB
brazil_acre
__init__.py
0 Bytes
acre.py
8.9 kB
acre_test.py
2.4 kB
input_event.json
247 Bytes
sample_data.csv
1.6 kB
brazil_amapa
__init__.py
0 Bytes
amapa.py
6.8 kB
amapa_test.py
2.1 kB
broken_date.csv
258 Bytes
input_event.json
272 Bytes
sample_data.csv
403 Bytes
brazil_ceara
__init__.py
0 Bytes
ceara.py
7.6 kB
ceara_test.py
2.3 kB
input_event.json
257 Bytes
sample_data.csv
924 Bytes
brazil_distrito_federal
__init__.py
0 Bytes
dictionaries.json
3.7 kB
distrito_federal.py
7.2 kB
distrito_federal_test.py
1.7 kB
input_event.json
255 Bytes
sample_data.csv
394 Bytes
brazil_espirito_santo
__init__.py
0 Bytes
espirito_santo.py
11.0 kB
espirito_santo_test.py
3.2 kB
input_event.json
242 Bytes
sample_data.csv
1.4 kB
brazil_goias
__init__.py
0 Bytes
goias.py
5.4 kB
goias_test.py
1.5 kB
input_event.json
257 Bytes
sample_data.csv
310 Bytes
brazil_para
__init__.py
0 Bytes
input_event.json
257 Bytes
para.py
8.1 kB
para_test.py
3.2 kB
sample_data.csv
1.0 kB
brazil_paraiba
__init__.py
0 Bytes
input_event.json
257 Bytes
paraiba.py
7.3 kB
paraiba_test.py
2.2 kB
sample_data.csv
755 Bytes
brazil_rio_de_janeiro
__init__.py
0 Bytes
input_event.json
240 Bytes
rio_de_janeiro.py
4.8 kB
rio_de_janeiro_test.py
12.9 kB
sample_data.csv
2.7 kB
brazil_santa_catarina
__init__.py
0 Bytes
input_event.json
245 Bytes
sample_data.csv
2.0 kB
santa_catarina.py
9.3 kB
santa_catarina_test.py
4.5 kB
brazil_srag
__init__.py
0 Bytes
dictionaries.json
806.4 kB
input_event.json
216 Bytes
sample_data.csv
3.4 kB
srag.py
17.1 kB
srag_test.py
7.1 kB
canada
__init__.py
0 Bytes
canada.py
3.7 kB
canada_test.py
1.9 kB
input_event.json
266 Bytes
sample_data.csv
599 Bytes
ch_zurich
__init__.py
0 Bytes
input_event.json
335 Bytes
sample_data.csv
580 Bytes
zurich.py
3.6 kB
zurich_test.py
1.7 kB
colombia
__init__.py
0 Bytes
colombia.py
12.3 kB
colombia_test.py
39.8 kB
geocoding_dictionaries.json
231.9 kB
input_event.json
252 Bytes
sample_data.csv
4.1 kB
cuba
__init__.py
0 Bytes
cuba.py
10.6 kB
cuba_test.py
7.2 kB
geocodes.csv
8.5 kB
input_event.json
223 Bytes
sample_data.json
11.8 kB
czechia
__init__.py
0 Bytes
czechia.py
3.5 kB
czechia_test.py
2.8 kB
geocodes.json
32.4 kB
get_geocodes.py
2.4 kB
input_event.json
253 Bytes
sample_data.csv
213 Bytes
england
README.md
329 Bytes
england.py
6.9 kB
england_test.py
15.9 kB
geocoding_dictionaries.json
14.2 kB
input_event.json
231 Bytes
sample_data.csv
1.5 kB
estonia
__init__.py
0 Bytes
estonia.py
3.1 kB
estonia_test.py
1.3 kB
input_event.json
254 Bytes
sample_data.csv
338 Bytes
example
README.md
117 Bytes
__init__.py
0 Bytes
example.py
1.1 kB
example_test.py
939 Bytes
input_event.json
209 Bytes
sample_data.csv
186 Bytes
germany
.vscode
settings.json
45 Bytes
__init__.py
0 Bytes
dictionaries.json
54.1 kB
germany.py
5.9 kB
germany_test.py
2.4 kB
input_event.json
279 Bytes
sample_data.csv
523 Bytes
hongkong
__init__.py
0 Bytes
hongkong.py
5.4 kB
hongkong_test.py
7.0 kB
input_event.json
254 Bytes
sample_data.csv
565 Bytes
india
__init__.py
0 Bytes
india.py
5.1 kB
india_test.py
2.4 kB
input_event.json
207 Bytes
sample_data.csv
779 Bytes
sample_data.json
817 Bytes
japan
__init__.py
0 Bytes
input_event.json
208 Bytes
japan.py
4.5 kB
japan_test.py
4.3 kB
sample_data.json
1.9 kB
mexico
__init__.py
0 Bytes
dictionaries.json
318.8 kB
input_event.json
279 Bytes
mexico.py
8.1 kB
mexico_test.py
1.8 kB
sample_data.csv
748 Bytes
new_zealand
__init__.py
0 Bytes
geocodes.json
1.3 kB
input_event.json
264 Bytes
new_zealand.py
4.4 kB
new_zealand_test.py
3.0 kB
sample_data.csv
789 Bytes
paraguay
__init__.py
0 Bytes
input_event.json
448 Bytes
paraguay.py
3.2 kB
paraguay_test.py
1.6 kB
sample_data.csv
383 Bytes
peru
__init__.py
0 Bytes
geocoding_dictionaries.json
431.6 kB
input_event.json
247 Bytes
peru.py
5.4 kB
peru_test.py
15.1 kB
sample_data.csv
1.2 kB
republic_of_korea
__init__.py
0 Bytes
input_event.json
285 Bytes
republic_of_korea.py
6.7 kB
republic_of_korea_test.py
7.2 kB
sample_data.csv
1.3 kB
riograndedosul
__init__.py
0 Bytes
input_event.json
195 Bytes
riograndedosul.py
8.7 kB
riograndedosul_test.py
2.0 kB
sample_data.csv
640 Bytes
saopaolo
__init__.py
0 Bytes
input_event.json
279 Bytes
sample_data.csv
422 Bytes
saopaolo.py
2.0 kB
saopaolo_test.py
2.3 kB
scotland
__init__.py
0 Bytes
input_event.json
368 Bytes
sample_data.csv
1.8 kB
scotland.py
4.2 kB
scotland_test.py
1.5 kB
south_africa
__init__.py
0 Bytes
input_event.json
295 Bytes
sample_data.csv
678 Bytes
south_africa.py
5.0 kB
south_africa_test.py
5.4 kB
taiwan
__init__.py
0 Bytes
geocodes.json
5.0 kB
get_geocodes.py
1.5 kB
input_event.json
355 Bytes
sample_data.csv
277 Bytes
taiwan.py
3.8 kB
taiwan_test.py
2.8 kB
thailand
__init__.py
0 Bytes
input_event.json
235 Bytes
nationalities.json
1.7 kB
sample_data.json
1.6 kB
thailand.py
3.6 kB
thailand_test.py
2.8 kB
variants
__init__.py
0 Bytes
input_event.json
272 Bytes
sample_data.csv
4.9 kB
variants.py
6.5 kB
variants_test.py
11.6 kB
poetry.lock
21.1 kB
pyproject.toml
508 Bytes
pytest.ini
64 Bytes
retrieval
__init__.py
0 Bytes
retrieval.py
14.4 kB
retrieval_test.py
18.5 kB
valid_scheduled_event.json
159 Bytes
run.sh
65 Bytes
run_docker.sh
282 Bytes
setup_s3_test.sh
574 Bytes
test.sh
159 Bytes
test_clean_old_ingestion_source_files.py
3.7 kB
test_docker.sh
213 Bytes
tox.ini
225 Bytes
monitoring
README.md
582 Bytes
completeness.py
3.1 kB
daily_metrics.py
3.2 kB
freshness.py
3.0 kB
requirements-completeness.txt
29 Bytes
requirements.txt
32 Bytes
test_daily_metrics.py
2.5 kB
test_freshness.py
3.8 kB
loadtest
README.md
7.8 kB
locustfile.py
1.9 kB
requirements.txt
62 Bytes
screenshots
number_of_users_1601386056.png
33.5 kB
response_times_(ms)_1601386056.png
59.0 kB
total_requests_per_second_1601386056.png
47.8 kB
suggest
README.md
121 Bytes
acronyms
generate.py
2.2 kB
requirements.txt
16 Bytes
test_generate_acronyms.py
1.2 kB
nationalities.txt
2.3 kB
occupations.txt
6.1 kB
pathogens.csv
5.5 kB
place_of_transmission.txt
351 Bytes
preexisting_conditions.txt
266.2 kB
route_of_transmission.txt
128 Bytes
symptoms.txt
17.5 kB
verification
curator-service
Dockerfile
2.8 kB
api
.eslintignore
197 Bytes
.eslintrc.js
1.0 kB
.prettierrc.js
112 Bytes
Dockerfile
671 Bytes
README.md
4.8 kB
config.json
267 Bytes
jest-mongodb-config.js
122 Bytes
jest.config.js
330 Bytes
nodemon.json
130 Bytes
openapi
openapi.yaml
79.8 kB
package-lock.json
899.6 kB
package.json
3.2 kB
src
clients
aws-batch-client.ts
4.6 kB
aws-events-client.ts
4.3 kB
aws-lambda-client.ts
1.8 kB
email-client.ts
2.7 kB
controllers
auth.ts
35.6 kB
cases.ts
22.4 kB
geocode.ts
1.3 kB
sources.ts
13.4 kB
uploads.ts
6.4 kB
users.ts
2.4 kB
index.ts
11.8 kB
model
automation.ts
848 Bytes
case.ts
953 Bytes
date-filter.ts
710 Bytes
origin.ts
334 Bytes
parser.ts
300 Bytes
regex-parsing.ts
696 Bytes
schedule.ts
1.1 kB
source.ts
2.5 kB
token.ts
579 Bytes
upload-summary.ts
513 Bytes
upload.ts
652 Bytes
user.ts
2.0 kB
server.ts
462 Bytes
types
appmetrics-dash.d.ts
105 Bytes
util
assert-string.ts
479 Bytes
logger.ts
533 Bytes
validate-env.ts
4.0 kB
test
auth.test.ts
12.2 kB
cases.test.ts
17.1 kB
clients
aws-batch-client.test.ts
3.7 kB
aws-events-client.test.ts
5.8 kB
geocode.test.ts
2.5 kB
index.test.ts
812 Bytes
model
automation.test.ts
2.4 kB
data
automation.full.json
228 Bytes
automation.minimal.json
141 Bytes
date-filter.full.json
47 Bytes
origin.full.json
53 Bytes
origin.minimal.json
31 Bytes
parser.full.json
63 Bytes
regex-parsing.full.json
114 Bytes
schedule.full.json
103 Bytes
schedule.minimal.json
47 Bytes
source.full.json
926 Bytes
source.minimal.json
103 Bytes
upload-summary.full.json
100 Bytes
upload-summary.minimal.json
3 Bytes
upload.full.json
167 Bytes
upload.minimal.json
75 Bytes
date-filter.test.ts
466 Bytes
origin.test.ts
946 Bytes
parser.test.ts
794 Bytes
regex-parsing.test.ts
1.5 kB
schedule.test.ts
1.8 kB
source.test.ts
1.5 kB
upload-summary.test.ts
673 Bytes
upload.test.ts
432 Bytes
user.test.ts
961 Bytes
sources.test.ts
23.7 kB
uploads.test.ts
15.7 kB
users
base.json
55 Bytes
users.test.ts
5.0 kB
tsconfig.build.json
138 Bytes
tsconfig.json
235 Bytes
auth.md
3.9 kB
ui
.eslintignore
172 Bytes
.eslintrc.js
1.6 kB
.gitignore
512 Bytes
.prettierrc.js
112 Bytes
Dockerfile
651 Bytes
README.md
8.6 kB
amplify-pull.sh
712 Bytes
csv.gif
6.3 MB
cypress
fixtures
bad_bulk_data.csv
210 Bytes
bulk_data.csv
263 Bytes
bulk_data_with_all_fields.csv
544 Bytes
bulk_data_with_case_count.csv
204 Bytes
no_header.csv
119 Bytes
updated_bulk_data.csv
265 Bytes
integration
components
AppTest.spec.ts
12.2 kB
AutomatedSourceForm.spec.ts
2.8 kB
BulkCaseForm.spec.ts
11.8 kB
Curator.spec.ts
15.4 kB
EditCase.spec.ts
1.9 kB
LandingPage.spec.ts
6.8 kB
LinelistTableTest.spec.ts
20.9 kB
NewCaseForm.spec.ts
16.7 kB
ProfileTest.spec.ts
2.4 kB
SourceTableTest.spec.ts
2.4 kB
UploadsTableTest.spec.ts
5.1 kB
UsersTest.spec.ts
3.2 kB
ViewCase.spec.ts
2.0 kB
plugins
index.ts
2.1 kB
support
commands.ts
5.1 kB
index.ts
471 Bytes
tsconfig.json
324 Bytes
cypress.json
425 Bytes
install_in_ci.sh
140 Bytes
ohio.gif
3.0 MB
package-lock.json
2.2 MB
package.json
4.0 kB
public
Gh-ogimage.png
30.1 kB
favicon.ico
10.5 kB
fields.txt
1.5 kB
index.html
3.1 kB
logo192.png
15.1 kB
logo512.png
75.8 kB
manifest.json
485 Bytes
robots.txt
67 Bytes
src
api
models
User.ts
201 Bytes
components
App
App.test.tsx
8.0 kB
App.tsx
34.3 kB
AppModal.tsx
2.8 kB
AutomatedBackfill.test.tsx
3.0 kB
AutomatedBackfill.tsx
14.7 kB
AutomatedSourceForm.test.tsx
2.0 kB
AutomatedSourceForm.tsx
16.1 kB
BulkCaseForm.test.tsx
3.2 kB
BulkCaseForm.tsx
25.2 kB
Case.tsx
3.2 kB
CaseExcludeDialog.tsx
2.7 kB
CaseForm.test.tsx
3.6 kB
CaseForm.tsx
43.2 kB
CaseIncludeDialog.tsx
1.4 kB
DataGuideDialog.test.tsx
1.8 kB
DataGuideDialog.tsx
5.3 kB
EditCase.test.tsx
6.0 kB
EditCase.tsx
1.4 kB
FiltersModal.test.tsx
2.2 kB
FiltersModal.tsx
27.6 kB
GHListLogo.tsx
7.0 kB
LinelistTable.test.tsx
23.5 kB
LinelistTable.tsx
92.5 kB
ParsersAutocomplete.test.tsx
396 Bytes
ParsersAutocomplete.tsx
2.6 kB
PolicyLink.test.tsx
794 Bytes
PolicyLink.tsx
1.3 kB
Profile.test.tsx
6.6 kB
Profile.tsx
15.9 kB
SearchBar.tsx
10.5 kB
SnackbarAlert
index.tsx
820 Bytes
SourceRetrievalButton.test.tsx
350 Bytes
SourceRetrievalButton.tsx
2.2 kB
SourceTable.test.tsx
17.7 kB
SourceTable.tsx
34.4 kB
StaticMap.tsx
418 Bytes
TermsOfUse.tsx
2.5 kB
UploadsTable.test.tsx
2.5 kB
UploadsTable.tsx
11.2 kB
User.tsx
152 Bytes
Users.test.tsx
9.3 kB
Users.tsx
10.3 kB
Utils.tsx
191 Bytes
VerificationStatusHeader.tsx
681 Bytes
VerificationStatusIndicator.test.tsx
738 Bytes
VerificationStatusIndicator.tsx
1.4 kB
ViewCase.test.tsx
7.4 kB
ViewCase.tsx
35.8 kB
assets
GHListLogo.svg
4.8 kB
excluded_icon.svg
346 Bytes
healthmap_insignias.png
185.8 kB
healthmap_insignias.svg
248.3 kB
partner-logos
bch.png
14.2 kB
georgetown.png
17.1 kB
google.png
32.0 kB
harvard.png
26.5 kB
hopkins.png
80.6 kB
northeastern.png
32.7 kB
oxford-martin.png
69.3 kB
oxford.png
10.2 kB
rockefeller.png
57.4 kB
washington.png
5.0 kB
unverified_icon.svg
676 Bytes
variants.json
478 Bytes
verification_header.svg
148 Bytes
verified_icon.svg
281 Bytes
bulk-case-form-fields
BulkCaseFormValues.tsx
177 Bytes
CaptionedProgress.tsx
977 Bytes
CaseValidationError.test.ts
1.5 kB
CaseValidationError.ts
2.8 kB
FileUpload.tsx
2.3 kB
ValidationErrorList.test.tsx
2.2 kB
ValidationErrorList.tsx
1.7 kB
common-form-fields
AppTooltip.tsx
959 Bytes
FieldTitle.tsx
1.4 kB
FormikFields.tsx
7.9 kB
Source.tsx
13.0 kB
fixtures
fullCase.json
4.6 kB
landing-page
ChangePasswordForm.tsx
10.3 kB
ForgotPasswordForm.tsx
6.0 kB
LandingPage.test.tsx
13.4 kB
LandingPage.tsx
9.6 kB
PartnerLogos.tsx
2.9 kB
SignInForm.tsx
8.9 kB
SignUpForm.tsx
17.0 kB
new-case-form-fields
CaseFormValues.tsx
2.4 kB
Demographics.tsx
6.9 kB
Events.tsx
7.7 kB
GenomeSequences.tsx
7.9 kB
Location.test.tsx
1.4 kB
Location.tsx
5.0 kB
LocationForm.tsx
8.0 kB
Notes.tsx
937 Bytes
NumCases.tsx
1.5 kB
Pathogens.tsx
4.5 kB
PreexistingConditions.tsx
2.3 kB
StyledTooltip.tsx
774 Bytes
Symptoms.tsx
6.9 kB
Transmission.tsx
5.1 kB
TravelHistory.tsx
14.1 kB
Vaccines.tsx
7.3 kB
Variant.tsx
1.6 kB
util
countryNames.tsx
592 Bytes
date.test.tsx
885 Bytes
date.tsx
1.2 kB
links.tsx
294 Bytes
randomString.tsx
296 Bytes
searchQuery.test.tsx
1.9 kB
searchQuery.tsx
1.6 kB
test-utils.tsx
1.5 kB
validate-env.ts
3.9 kB
constants
types.ts
285 Bytes
fonts
.htaccess
431 Bytes
mabry-bold-italic-pro
mabry-bold-italic-pro.eot
190.4 kB
mabry-bold-italic-pro.ttf
190.2 kB
mabry-bold-italic-pro.woff
92.1 kB
mabry-bold-italic-pro.woff2
69.5 kB
mabry-bold-pro
mabry-bold-pro.eot
192.0 kB
mabry-bold-pro.ttf
191.8 kB
mabry-bold-pro.woff
88.9 kB
mabry-bold-pro.woff2
67.4 kB
mabry-italic-pro
mabry-italic-pro.eot
189.9 kB
mabry-italic-pro.ttf
189.7 kB
mabry-italic-pro.woff
92.2 kB
mabry-italic-pro.woff2
69.4 kB
mabry-light-italic-pro
mabry-light-italic-pro.eot
187.2 kB
mabry-light-italic-pro.ttf
187.0 kB
mabry-light-italic-pro.woff
89.4 kB
mabry-light-italic-pro.woff2
67.0 kB
mabry-light-pro
mabry-light-pro.eot
187.8 kB
mabry-light-pro.ttf
187.6 kB
mabry-light-pro.woff
86.1 kB
mabry-light-pro.woff2
64.4 kB
mabry-regular-pro
mabry-regular-pro.eot
191.1 kB