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Citing IMGT/GENE-DB: Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005). PMID: 15608191 pdf

IMGT/GENE-DB program version: 3.1.33 (22 March 2021)
IMGT/GENE-DB data updates

IMGT/GENE-DB reference sequences in FASTA format:

Nucleotide sequences for IMGT alleles


The FASTA header contains 15 fields separated by '|':

1. IMGT/LIGM-DB accession number(s)
2. IMGT gene and allele name
3. species
4. IMGT allele functionality
5. exon(s), region name(s), or extracted label(s)
6. start and end positions in the IMGT/LIGM-DB accession number(s)
7. number of nucleotides in the IMGT/LIGM-DB accession number(s)
8. codon start, or 'NR' (not relevant) for non coding labels
9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB
10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB
11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors
12. number of amino acids (AA): this field indicates that the sequence is in amino acids
13. number of characters in the sequence: nt (or AA)+IMGT gaps=total
14. partial (if it is)
15. reverse complementary (if it is)

Number of results = 7
>M14996+M14997+M14998|TRGC1*01|Homo sapiens|F|EX1+EX2+EX3| |519 nt|1|+1| | | |519+0=519| | |
gataaacaacttgatgcagatgtttcccccaagcccactatttttcttccttcaattgct
gaaacaaagctccagaaggctggaacatacctttgtcttcttgagaaatttttccctgat
gttattaagatacattggcaagaaaagaagagcaacacgattctgggatcccaggagggg
aacaccatgaagactaacgacacatacatgaaatttagctggttaacggtgccagaaaag
tcactggacaaagaacacagatgtatcgtcagacatgagaataataaaaacggagttgat
caagaaattatctttcctccaataaagacagatgtcatcacaatggatcccaaagacaat
tgttcaaaagatgcaaatgatacactactgctgcagctcacaaacacctctgcatattac
atgtacctcctcctgctcctcaagagtgtggtctattttgccatcatcacctgctgtctg
cttagaagaacggctttctgctgcaatggagagaaatca
>M14999|TRGC1*02|Homo sapiens|F|EX1| |301 nt|1|+1| | | |301+0=301| | |
gataaacaacttgatgcagatgtttcccccaagcccactatttttcttccttcgattgct
gaaacaaaactccagaaggctggaacatacctttgtcttcttgagaaatttttcccagat
attattaagatacattggcaagaaaagaagagcaacacgattctgggatcccaggagggg
aacaccatgaagactaacgacacatacatgaaatttagctggttaacggtgccagaagag
tcactggacaaagaacacagatgtatcgtcagacatgagaataataaaaacggaattgat
c
>M15002+M13231cDNA|TRGC2*01|Homo sapiens|F|EX1+EX2T+EX2+EX3| |568 nt|1|+1| | | |568+0=568| | |
gataaacaacttgatgcagatgtttcccccaagcccactatttttcttccttcaattgct
gaaacaaaactccagaaggctggaacatacctttgtcttcttgagaaatttttcccagat
attattaagatacattggcaagaaaagaagagcaacacgattctgggatcccaggagggg
aacaccatgaagactaacgacacatacatgaaatttagctggttaacggtgccagaagag
tcactggacaaagaacacagatgtatcgtcagacatgagaataataaaaacggaattgat
caagaaattatctttcctccaataaagacaggatgtcaccacagtggatcccaaagacag
ttattcaaaagatgcaaatgatgtcatcacaatggatcccaaagacaattggtcaaaaga
tgcaaatgatacactactgctgcagctcacaaacacctctgcatattacatgtacctcct
cctgctcctcaagagtgtggtctattttgccatcatcacctgctgtctgcttggaagaac
ggctttctgctgcaatggagagaaatca
>M15001+M15004+M15005+M15007|TRGC2*02|Homo sapiens|F|EX1+EX2R+EX2+EX3| |567 nt|1|+1| | | |567+0=567| | |
gataaacaacttgatgcagatgtttcccccaagcccactatttttcttccttcgattgct
gaaacaaaactccagaaggctggaacatacctttgtcttcttgagaaatttttcccagat
attattaagatacattggcaagaaaagaagagcaacacgattctgggatcccaggagggg
aacaccatgaagactaacgacacatacatgaaatttagctggttaacggtgccagaagag
tcactggacaaagaacacagatgtatcgtcagacatgagaataataaaaacggaattgat
caagaaattatctttcctccaataaagacagatgtcaccacagtggatcccaaatacaat
tattcaaaggatgcaaatgatgtcatcacaatggatcccaaagacaattggtcaaaagat
gcaaatgatacactactgctgcagctcacaaacacctctgcatattacatgtacctcctc
ctgctcctcaagagtgtggtctattttgccatcatcacctgctgtctgcttggaagaacg
gctttctgctgcaatggagagaaatca
>M17324cDNA|TRGC2*03|Homo sapiens|F|EX1+EX2R+EX2+EX3| |567 nt|1|+1| | | |567+0=567| | |
gataaacaacttgatgcagatgtttcccccaagcccactatttttcttccttcgattgct
gaaacaaaactccagaaggctggaacatacctttgtcttcttgagaaatttttcccagat
attattaagatacattggcaagaaaagaagagcaacacgattctgggatcccaggagggg
aacaccatgaagactaacgacacatacatgaaatttagctggttaacggtgccagaagag
tcactggacaaagaacacagatgtatcgtcagacatgagaataataaaaacggaattgat
caagaaattatctttcctccaataaagacagatgtcaccacagtggatcccaaatacaat
tattcaaaggatgcaaatgatgtcatcacaatggatcccaaagacaattggtcaaaagat
gcaattgatacactactgctgcagctcacaaacacctctgcatattacatgtacctcctc
ctgctcctcaagagtggtgtctattttgccatcatcacctgctgtctgcttagaagaacg
gctttctgctgcaatggagagaaatca
>AF159056|TRGC2*04|Homo sapiens|F|EX1+EX2R+EX2+EX3| |567 nt|1|+1| | | |567+0=567| | |
gataaacaacttgatgcagatgtttcccccaagcccactatttttcttccttcaattgct
gaaacaaaactccagaaggctggaacatacctttgtcttcttgagaaatttttcccagat
attattaagatacattggcaagaaaagaagagcaacacgattctgggatcccaggagggg
aacaccatgaagactaacgacacatacatgaaatttagctggttaacggtgccagaagag
tcactggacaaagaacacagatgtatcgtcagacatgagaataataaaaacggaattgat
caagaaattatctttcctccaataaagacagatgtcaccacagtggatcccaaatacaat
tattcaaaggatgcaaatgatgtcatcacaatggatcccaaagacaattggtcaaaagat
gcaattgatacactactgctgcagctcacaaacacctctgcatattacatgtacctcctc
ctgctcctcaagagtgtggtctattttgccatcatcacctgctgtctgcttggaagaacg
gctttctgctgcaatggagagaaatca
>M17323cDNA+M25318|TRGC2*05|Homo sapiens|F|EX1+EX2T+EX2R+EX2+EX3| |615 nt|1|+1| | | |615+0=615| | |
gataaacaacttgatgcagatgtttcccccaagcccactatttttcttccttcgattgct
gaaacaaaactccagaaggctggaacatatctttgtcttcttgagaaatttttcccagat
attattaagatacattggcaagaaaagaagagcaacacgattctgggatcccaggagggg
aacaccatgaagactaacgacacatacatgaaatttagctggttaacggtgccagaagag
tcactggacaaagaacacagatgtatcgtcagacatgagaataataaaaacggaattgat
caagaaattatctttcctccaataaagacagatgtcaccacagtggatcccaaagacagt
tattcaaaagatgcaaatgatgtcaccacagtggatcccaaatacaattattcaaaggat
gcaaatgatgtcatcacaatggatcccaaagacaattggtcaaaagatgcaaatgataca
ctactgctgcagctcacaaacacctctgcatattacatgtacctcctcctgctcctcaag
agtgtggtctattttgccatcatcacctgctgtctgcttggaagaacggctttctgctgc
aatggagagaaatca


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