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Citing IMGT/GENE-DB: Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005). PMID: 15608191 pdf

IMGT/GENE-DB program version: 3.1.33 (22 March 2021)
IMGT/GENE-DB data updates

IMGT/GENE-DB reference sequences in FASTA format:

Nucleotide sequences for IMGT alleles


The FASTA header contains 15 fields separated by '|':

1. IMGT/LIGM-DB accession number(s)
2. IMGT gene and allele name
3. species
4. IMGT allele functionality
5. exon(s), region name(s), or extracted label(s)
6. start and end positions in the IMGT/LIGM-DB accession number(s)
7. number of nucleotides in the IMGT/LIGM-DB accession number(s)
8. codon start, or 'NR' (not relevant) for non coding labels
9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB
10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB
11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors
12. number of amino acids (AA): this field indicates that the sequence is in amino acids
13. number of characters in the sequence: nt (or AA)+IMGT gaps=total
14. partial (if it is)
15. reverse complementary (if it is)

Number of results = 5
>J00241|IGKC*01|Homo sapiens|F|CL| |321 nt|1|+1| | | |321+0=321| | |
cgaactgtggctgcaccatctgtcttcatcttcccgccatctgatgagcagttgaaatct
ggaactgcctctgttgtgtgcctgctgaataacttctatcccagagaggccaaagtacag
tggaaggtggataacgccctccaatcgggtaactcccaggagagtgtcacagagcaggac
agcaaggacagcacctacagcctcagcagcaccctgacgctgagcaaagcagactacgag
aaacacaaagtctacgcctgcgaagtcacccatcagggcctgagctcgcccgtcacaaag
agcttcaacaggggagagtgt
>M11736|IGKC*02|Homo sapiens|F|CL| |321 nt|1|+1| | | |321+0=321| | |
cgaactgtggctgcaccatctgtcttcatcttcccgccatctgatgagcagttgaaatct
ggaactgcctctgttgtgtgcctgctgaataacttctatcccagagaggccaaagtacag
tggaaggtggataacgccctccaatcgggtaactcccaggagagtgtcacagagcaggag
agcaaggacagcacctacagcctcagcagcaccctgacgctgagcaaagcagactacgag
aaacacaaagtctacgccggcgaagtcacccatcagggcctgagctcgcccgtcacaaag
agcttcaacaggggagagtgt
>M11737|IGKC*03|Homo sapiens|F|CL| |321 nt|1|+1| | | |321+0=321| | |
cgaactgtggctgcaccatctgtcttcatcttcccgccatctgatgagcagttgaaatct
ggaactgcctctgttgtgtgcctgctgaataacttctatcccagagaggccaaagtacag
cggaaggtggataacgccctccaatcgggtaactcccaggagagtgtcacagagcaggag
agcaaggacagcacctacagcctcagcagcaccctgacgctgagcaaagcagactacgag
aaacacaaagtctacgcctgcgaagtcacccatcagggcctgagctcgcccgtcacaaag
agcttcaacaggggagagtgt
>AF017732|IGKC*04|Homo sapiens|F|CL| |321 nt|1|+1| | | |321+0=321| | |
cgaactgtggctgcaccatctgtcttcatcttcccgccatctgatgagcagttgaaatct
ggaactgcctctgttgtgtgcctgctgaataacttctatcccagagaggccaaagtacag
tggaaggtggataacgccctccaatcgggtaactcccaggagagtgtcacagagcaggac
agcaaggacagcacctacagcctcagcagcaccctgacgctgagcaaagcagactacgag
aaacacaaactctacgcctgcgaagtcacccatcagggcctgagctcgcccgtcacaaag
agcttcaacaggggagagtgt
>AF113887|IGKC*05|Homo sapiens|(F)|CL| |321 nt|1|+1| | | |321+0=321| | |
cgaactgtggctgcaccatctgtcttcatcttcccgccatctgatgagcagttgaaatct
ggaactgcctctgttgtgtgcctgctgaataacttctatcccagagaggccaaagtacag
tggaaggtggataacgccctccaatcgggtaactcccaggagagtgtcacagagcaggac
agcaaggacagcacctacagcctcagcaacaccctgacgctgagcaaagcagactacgag
aaacacaaagtctacgcctgcgaagtcacccatcagggcctgagctcgcccgtcacaaag
agcttcaacaggggagagtgc


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