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Citing IMGT/GENE-DB: Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005).
PMID: 15608191
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IMGT/GENE-DB program version: 3.1.33 (22 March 2021)
IMGT/GENE-DB data updates
The FASTA header contains 15 fields separated by '|': 1. IMGT/LIGM-DB accession number(s) 2. IMGT gene and allele name 3. species 4. IMGT allele functionality 5. exon(s), region name(s), or extracted label(s) 6. start and end positions in the IMGT/LIGM-DB accession number(s) 7. number of nucleotides in the IMGT/LIGM-DB accession number(s) 8. codon start, or 'NR' (not relevant) for non coding labels 9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB 10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB 11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors 12. number of amino acids (AA): this field indicates that the sequence is in amino acids 13. number of characters in the sequence: nt (or AA)+IMGT gaps=total 14. partial (if it is) 15. reverse complementary (if it is)
>M20289|TRDJ1*01|Homo sapiens|F|J-REGION|51..101|51 nt|3| | | | |51+0=51| | | acaccgataaactcatctttggaaaaggaacccgtgtgactgtggaaccaa >L36386|TRDJ2*01|Homo sapiens|F|J-REGION|39..92|54 nt|3| | | | |54+0=54| | | ctttgacagcacaactcttctttggaaagggaacacaactcatcgtggaaccag >M21508|TRDJ3*01|Homo sapiens|F|J-REGION|735..793|59 nt|2| | | | |59+0=59| | | ctcctgggacacccgacagatgtttttcggaactggcatcaaactcttcgtggagcccc >AJ249814|TRDJ4*01|Homo sapiens|F|J-REGION|1..48|48 nt|3| | | | |48+0=48| | | ccagacccctgatctttggcaaaggaacctatctggaggtacaacaac
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