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Citing IMGT/GENE-DB: Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005). PMID: 15608191 pdf

IMGT/GENE-DB program version: 3.1.33 (22 March 2021)
IMGT/GENE-DB data updates

IMGT/GENE-DB reference sequences in FASTA format:

Nucleotide sequences for F+ORF+all P alleles


The FASTA header contains 15 fields separated by '|':

1. IMGT/LIGM-DB accession number(s)
2. IMGT gene and allele name
3. species
4. IMGT allele functionality
5. exon(s), region name(s), or extracted label(s)
6. start and end positions in the IMGT/LIGM-DB accession number(s)
7. number of nucleotides in the IMGT/LIGM-DB accession number(s)
8. codon start, or 'NR' (not relevant) for non coding labels
9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB
10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB
11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors
12. number of amino acids (AA): this field indicates that the sequence is in amino acids
13. number of characters in the sequence: nt (or AA)+IMGT gaps=total
14. partial (if it is)
15. reverse complementary (if it is)

Number of results = 16
>K02545|TRBJ1-1*01|Homo sapiens|F|J-REGION|749..796|48 nt|3| | | | |48+0=48| | |
tgaacactgaagctttctttggacaaggcaccagactcacagttgtag
>K02545|TRBJ1-2*01|Homo sapiens|F|J-REGION|886..933|48 nt|3| | | | |48+0=48| | |
ctaactatggctacaccttcggttcggggaccaggttaaccgttgtag
>M14158|TRBJ1-3*01|Homo sapiens|F|J-REGION|1499..1548|50 nt|2| | | | |50+0=50| | |
ctctggaaacaccatatattttggagagggaagttggctcactgttgtag
>M14158|TRBJ1-4*01|Homo sapiens|F|J-REGION|2095..2145|51 nt|3| | | | |51+0=51| | |
caactaatgaaaaactgttttttggcagtggaacccagctctctgtcttgg
>M14158|TRBJ1-5*01|Homo sapiens|F|J-REGION|2368..2417|50 nt|2| | | | |50+0=50| | |
tagcaatcagccccagcattttggtgatgggactcgactctccatcctag
>M14158|TRBJ1-6*01|Homo sapiens|F|J-REGION|2859..2911|53 nt|2| | | | |53+0=53| | |
ctcctataattcacccctccactttgggaatgggaccaggctcactgtgacag
>L36092|TRBJ1-6*02|Homo sapiens|F|J-REGION|643043..643095|53 nt|2| | | | |53+0=53| | |
ctcctataattcacccctccactttgggaacgggaccaggctcactgtgacag
>X02987|TRBJ2-1*01|Homo sapiens|F|J-REGION|800..849|50 nt|2| | | | |50+0=50| | |
ctcctacaatgagcagttcttcgggccagggacacggctcaccgtgctag
>X02987|TRBJ2-2*01|Homo sapiens|F|J-REGION|995..1045|51 nt|3| | | | |51+0=51| | |
cgaacaccggggagctgttttttggagaaggctctaggctgaccgtactgg
>X02987|TRBJ2-2P*01|Homo sapiens|ORF|J-REGION|1132..1177|46 nt|1| | || |46+0=46| | |
ctgagaggcgctgctgggcgtctgggcggaggactcctggttctgg
>X02987|TRBJ2-3*01|Homo sapiens|F|J-REGION|1282..1330|49 nt|1| | | | |49+0=49| | |
agcacagatacgcagtattttggcccaggcacccggctgacagtgctcg
>X02987|TRBJ2-4*01|Homo sapiens|F|J-REGION|1432..1481|50 nt|2| | | | |50+0=50| | |
agccaaaaacattcagtacttcggcgccgggacccggctctcagtgctgg
>X02987|TRBJ2-5*01|Homo sapiens|F|J-REGION|1553..1600|48 nt|3| | | | |48+0=48| | |
accaagagacccagtacttcgggccaggcacgcggctcctggtgctcg
>X02987|TRBJ2-6*01|Homo sapiens|F|J-REGION|1673..1725|53 nt|2| | | | |53+0=53| | |
ctctggggccaacgtcctgactttcggggccggcagcaggctgaccgtgctgg
>M14159|TRBJ2-7*01|Homo sapiens|F|J-REGION|2316..2362|47 nt|2| | | | |47+0=47| | |
ctcctacgagcagtacttcgggccgggcaccaggctcacggtcacag
>X02987|TRBJ2-7*02|Homo sapiens|ORF|J-REGION|1890..1936|47 nt|2| | | | |47+0=47| | |
ctcctacgagcagtacgtcgggccgggcaccaggctcacggtcacag


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