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IMGT®, the international ImMunoGeneTics information system® | http://www.imgt.org |
Citing IMGT/GENE-DB: Giudicelli, V. et al. Nucleic Acids Res., 33: D256 - D261 (2005).
PMID: 15608191
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IMGT/GENE-DB program version: 3.1.33 (22 March 2021)
IMGT/GENE-DB data updates
The FASTA header contains 15 fields separated by '|': 1. IMGT/LIGM-DB accession number(s) 2. IMGT gene and allele name 3. species 4. IMGT allele functionality 5. exon(s), region name(s), or extracted label(s) 6. start and end positions in the IMGT/LIGM-DB accession number(s) 7. number of nucleotides in the IMGT/LIGM-DB accession number(s) 8. codon start, or 'NR' (not relevant) for non coding labels 9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB 10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB 11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors 12. number of amino acids (AA): this field indicates that the sequence is in amino acids 13. number of characters in the sequence: nt (or AA)+IMGT gaps=total 14. partial (if it is) 15. reverse complementary (if it is)
>J00256|IGHJ1*01|Homo sapiens|F|J-REGION|723..774|52 nt|1| | | | |52+0=52| | | gctgaatacttccagcactggggccagggcaccctggtcaccgtctcctcag >J00256|IGHJ1P*01|Homo sapiens|P|J-REGION|504..557|54 nt|1| | | | |54+0=54| | | aaaggtgctgggggtcccctgaacccgacccgccctgagaccgcagccacatca >IMGT000035|IGHJ1P*02|Homo sapiens|P|J-REGION|1014168..1014221|54 nt|1| | | | |54+0=54| | | aaaggtgctgggggcccctggacccgacccgccctggagaccgcagccacatca >J00256|IGHJ2*01|Homo sapiens|F|J-REGION|932..984|53 nt|2| | | | |53+0=53| | | ctactggtacttcgatctctggggccgtggcaccctggtcactgtctcctcag >J00256|IGHJ2P*01|Homo sapiens|P|J-REGION|1320..1380|61 nt|1| | | | |61+0=61| | | gctacaagtgcttggagcactggggcagggcagcccggacaccgtctccctgggaacgtc a >IMGT000035|IGHJ2P*02|Homo sapiens|P|J-REGION|1014993..1015054|62 nt|3| | | | |62+0=62| | | gctacaagtgcttggagcactggggccagggcagcccggccaccgtctccctgggaacgt ca >J00256|IGHJ3*01|Homo sapiens|F|J-REGION|1537..1586|50 nt|2| | | | |50+0=50| | | tgatgcttttgatgtctggggccaagggacaatggtcaccgtctcttcag >X86355|IGHJ3*02|Homo sapiens|F|J-REGION|1107..1156|50 nt|2| | | | |50+0=50| | | tgatgcttttgatatctggggccaagggacaatggtcaccgtctcttcag >J00256|IGHJ3P*01|Homo sapiens|P|J-REGION|2746..2797|52 nt|1| | | | |52+0=52| | | cttgcggttggacttcccagccgacagtggtggtctggcttctgaggggtca >X86355|IGHJ3P*02|Homo sapiens|P|J-REGION|2277..2326|50 nt|1| | | | |50+0=50| | | cttgcagttggacttcccaggccgacagtggtctggcttctgaggggtca >J00256|IGHJ4*01|Homo sapiens|F|J-REGION|1912..1959|48 nt|3| | | | |48+0=48| | | actactttgactactggggccaaggaaccctggtcaccgtctcctcag >X86355|IGHJ4*02|Homo sapiens|F|J-REGION|1480..1527|48 nt|3| | | | |48+0=48| | | actactttgactactggggccagggaaccctggtcaccgtctcctcag >M25625|IGHJ4*03|Homo sapiens|F|J-REGION|446..493|48 nt|3| | | | |48+0=48| | | gctactttgactactggggccaagggaccctggtcaccgtctcctcag >J00256|IGHJ5*01|Homo sapiens|F|J-REGION|2354..2404|51 nt|3| | | | |51+0=51| | | acaactggttcgactcctggggccaaggaaccctggtcaccgtctcctcag >X86355|IGHJ5*02|Homo sapiens|F|J-REGION|1878..1928|51 nt|3| | | | |51+0=51| | | acaactggttcgacccctggggccagggaaccctggtcaccgtctcctcag >J00256|IGHJ6*01|Homo sapiens|F|J-REGION|2947..3009|63 nt|3| | | | |63+0=63| | | attactactactactacggtatggacgtctgggggcaagggaccacggtcaccgtctcct cag >X86355|IGHJ6*02|Homo sapiens|F|J-REGION|2482..2543|62 nt|3| | | | |62+0=62|partial in 3'| | attactactactactacggtatggacgtctggggccaagggaccacggtcaccgtctcct ca >X86356|IGHJ6*03|Homo sapiens|F|J-REGION|2482..2543|62 nt|3| | | | |62+0=62|partial in 3'| | attactactactactactacatggacgtctggggcaaagggaccacggtcaccgtctcct ca >AJ879487|IGHJ6*04|Homo sapiens|F|J-REGION|39..101|63 nt|3| | | | |63+0=63| | | attactactactactacggtatggacgtctggggcaaagggaccacggtcaccgtctcct cag
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