Published February 9, 2022
| Version v3.7.0
Software
Open
ropensci/rgbif: rgbif v3.7.0
Authors/Creators
- 1. @ourresearch
- 2. INBO
- 3. Nielsen
- 4. @inbo
- 5. Florida Museum of Natural History
- 6. @ucberkeley
- 7. Global Biodiversity Information Facility
- 8. @gbif
- 9. College of Charleston
- 10. Berkeley Institute for Data Science
- 11. UCLA
- 12. University of Washington
- 13. University of Melbourne
- 14. Australian Antarctic Division
Description
There is a new rgbif maintainer: John Waller.
NEW FEATURESderived_dataset(): New function to register a cleaned or modified dataset on GBIF for citation. (#467)name_backbone_checklist(): New function that takes a list, vector, or data.frame of scientific names and asynchronously matches them to the backbone. (#475)pred_isnull(): New predicate function that includes NULL values from a column in the download. (#489)occ_download.print(): Now prints out much more information including a DOI and citation. (#494)
gbif_citation.gbif(): it is no longer considered best practice to generate a citation fromocc_search()orocc_data(). We recommendocc_download()orderived_dataset()instead. (#494)
occ_download_wait()andocc_download_meta(): now accept a class character download key directly. The keys does do not need to be class "occ_download". (#487)name_backbone(): now returns new columns "verbatim_name", "verabtim_genus" ect. that the user has supplied. This makes it easier for the user to track what has been matched. The verbose argument also has been un-retired. Ifverbose=TRUE, more results will be returned in a single data.frame. (#475)gbif_citation(): will now accept a download key directly.occ_download_get(): Does not throw an error if the data is already present andoverwrite=FALSE, it will just give a warning and return the already present dataset. This allows users to runocc_download_get(key) %>% occ_download_import()multiple times without re-downloading the same file withoverwrite=TRUE.download_predicate_dsl(): "publishingOrg" now added as a download key. (#496)key_lkupnow includes GBIF-style uppercase keys as well. Sopred("TAXON_KEY",212)andpred("taxonKey",212)will both work.
Wrote new articles highlighting new features and encouraging the use of occ_download() over occ_search().
New articles:
- Citing GBIF Mediated Data
- Set Up Your GBIF Username and Password
- Getting Occurrence Data From GBIF
- Downloading A Long Species List
- Working With Taxonomic Names
occ_download_import(): fixed bug related to select argument. (#479)map_fetch(): fixed bug related tosp::CRS(#497)
Files
ropensci/rgbif-v3.7.0.zip
Files
(10.4 MB)
| Name | Size | Download all |
|---|---|---|
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md5:bdbd7eceafc06fb13813ce1e621237b0
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Additional details
Related works
- Is supplement to
- https://github.com/ropensci/rgbif/tree/v3.7.0 (URL)